COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/LS_9a.markdup.txt - output/05_realign_xbOstLuri2/alignments/LS_9a.sorted.bam.part
READ: 68992426
WRITTEN: 68992426
EXCLUDED: 4280831
EXAMINED: 64711595
PAIRED: 64289112
SINGLE: 422483
DUPLICATE PAIR: 12929988
DUPLICATE SINGLE: 164203
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 13094191
DUPLICATE TOTAL: 13094191
ESTIMATED_LIBRARY_SIZE: 68794251