COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/LS_8a.markdup.txt - output/05_realign_xbOstLuri2/alignments/LS_8a.sorted.bam.part
READ: 66679505
WRITTEN: 66679505
EXCLUDED: 4149729
EXAMINED: 62529776
PAIRED: 62111704
SINGLE: 418072
DUPLICATE PAIR: 12814498
DUPLICATE SINGLE: 161949
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 12976447
DUPLICATE TOTAL: 12976447
ESTIMATED_LIBRARY_SIZE: 64510211