COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/LS_11a.markdup.txt - output/05_realign_xbOstLuri2/alignments/LS_11a.sorted.bam.part
READ: 77974023
WRITTEN: 77974023
EXCLUDED: 4680908
EXAMINED: 73293115
PAIRED: 72804206
SINGLE: 488909
DUPLICATE PAIR: 15240318
DUPLICATE SINGLE: 191101
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 15431419
DUPLICATE TOTAL: 15431419
ESTIMATED_LIBRARY_SIZE: 74335408