COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/LS_10a.markdup.txt - output/05_realign_xbOstLuri2/alignments/LS_10a.sorted.bam.part
READ: 67997997
WRITTEN: 67997997
EXCLUDED: 4220613
EXAMINED: 63777384
PAIRED: 63364840
SINGLE: 412544
DUPLICATE PAIR: 11919818
DUPLICATE SINGLE: 154667
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 12074485
DUPLICATE TOTAL: 12074485
ESTIMATED_LIBRARY_SIZE: 73280683