COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/Blank_plate2.markdup.txt - output/05_realign_xbOstLuri2/alignments/Blank_plate2.sorted.bam.part
READ: 3232
WRITTEN: 3232
EXCLUDED: 2402
EXAMINED: 830
PAIRED: 822
SINGLE: 8
DUPLICATE PAIR: 68
DUPLICATE SINGLE: 0
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 68
DUPLICATE TOTAL: 68
ESTIMATED_LIBRARY_SIZE: 2345