COMMAND: samtools markdup -@ 4 -s -f output/05_realign_xbOstLuri2/metrics/per_sample/Blank_plate1.markdup.txt - output/05_realign_xbOstLuri2/alignments/Blank_plate1.sorted.bam.part
READ: 686
WRITTEN: 686
EXCLUDED: 656
EXAMINED: 30
PAIRED: 26
SINGLE: 4
DUPLICATE PAIR: 0
DUPLICATE SINGLE: 1
DUPLICATE PAIR OPTICAL: 0
DUPLICATE SINGLE OPTICAL: 0
DUPLICATE NON PRIMARY: 0
DUPLICATE NON PRIMARY OPTICAL: 0
DUPLICATE PRIMARY TOTAL: 1
DUPLICATE TOTAL: 1
ESTIMATED_LIBRARY_SIZE: 0