/opt/ohpc/admin/lmod/lmod/init/bash: line 93: LD_LIBRARY_PATH: unbound variable
start 2026-09-27T03:18:02Z host n3434
[bwa_index] Pack FASTA... 3.42 sec
[bwa_index] Construct BWT for the packed sequence...
[BWTIncCreate] textLength=2057679154, availableWord=156785544
[BWTIncConstructFromPacked] 10 iterations done. 99999986 characters processed.
[BWTIncConstructFromPacked] 20 iterations done. 199999986 characters processed.
[BWTIncConstructFromPacked] 30 iterations done. 299999986 characters processed.
[BWTIncConstructFromPacked] 40 iterations done. 399999986 characters processed.
[BWTIncConstructFromPacked] 50 iterations done. 499999986 characters processed.
[BWTIncConstructFromPacked] 60 iterations done. 599999986 characters processed.
[BWTIncConstructFromPacked] 70 iterations done. 699999986 characters processed.
[BWTIncConstructFromPacked] 80 iterations done. 799999986 characters processed.
[BWTIncConstructFromPacked] 90 iterations done. 899999986 characters processed.
[BWTIncConstructFromPacked] 100 iterations done. 999999986 characters processed.
[BWTIncConstructFromPacked] 110 iterations done. 1099999986 characters processed.
[BWTIncConstructFromPacked] 120 iterations done. 1199999986 characters processed.
[BWTIncConstructFromPacked] 130 iterations done. 1299999986 characters processed.
[BWTIncConstructFromPacked] 140 iterations done. 1399789698 characters processed.
[BWTIncConstructFromPacked] 150 iterations done. 1492030338 characters processed.
[BWTIncConstructFromPacked] 160 iterations done. 1574010066 characters processed.
[BWTIncConstructFromPacked] 170 iterations done. 1646869874 characters processed.
[BWTIncConstructFromPacked] 180 iterations done. 1711623858 characters processed.
[BWTIncConstructFromPacked] 190 iterations done. 1769173314 characters processed.
[BWTIncConstructFromPacked] 200 iterations done. 1820319426 characters processed.
[BWTIncConstructFromPacked] 210 iterations done. 1865774178 characters processed.
[BWTIncConstructFromPacked] 220 iterations done. 1906170482 characters processed.
[BWTIncConstructFromPacked] 230 iterations done. 1942070770 characters processed.
[BWTIncConstructFromPacked] 240 iterations done. 1973975010 characters processed.
[BWTIncConstructFromPacked] 250 iterations done. 2002327538 characters processed.
[BWTIncConstructFromPacked] 260 iterations done. 2027523330 characters processed.
[BWTIncConstructFromPacked] 270 iterations done. 2049913330 characters processed.
[bwt_gen] Finished constructing BWT in 274 iterations.
[bwa_index] 524.11 seconds elapse.
[bwa_index] Update BWT... 2.85 sec
[bwa_index] Pack forward-only FASTA... 2.04 sec
[bwa_index] Construct SA from BWT and Occ... 267.22 sec
[main] Version: 0.7.19-r1273
[main] CMD: bwa index GCA_061535525.1_xbOstLuri2_USDA-ARS_PSRF_primary_genomic.fna
[main] Real time: 804.517 sec; CPU: 799.646 sec
end 2026-09-27T03:31:36Z