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"GC":[0.678988,0.514343,0.425587,0.43155,0.389023,0.37539,0.314226,0.39801,0.443409,0.342476,0.47229,0.465755,0.407092,0.400386,0.399765,0.40092,0.412219,0.407474,0.409417,0.407348,0.412201,0.406026,0.409884,0.406246,0.410383,0.406643,0.409834,0.405014,0.413351,0.405731,0.409724,0.40513,0.40889,0.408225,0.411764,0.408944,0.410687,0.409456,0.412944,0.410844,0.414217,0.407472,0.411907,0.411237,0.41116,0.412636,0.414754,0.410163,0.41506,0.411192,0.414206,0.412455,0.418301,0.414613,0.418959,0.413809,0.413336,0.413748,0.414999,0.410066,0.416133,0.413572,0.415948,0.414978,0.417173,0.412462,0.416687,0.417197,0.414509,0.415857,0.418565,0.414081,0.418742,0.416287,0.418302,0.417831,0.421181,0.417728,0.42122,0.418999,0.419645,0.420503,0.422539,0.416957,0.421621,0.42198,0.422601,0.421587,0.426212,0.421233,0.424186,0.423573,0.424475,0.425196,0.428942,0.425843,0.429618,0.429244,0.428721,0.431039,0.434153] }, "kmer_count": { "AAAAA":21339057, "AAAAT":9191732, "AAAAC":6866813, "AAAAG":8871387, 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"CATCA":3475424, "CATCT":2693323, "CATCC":1525312, "CATCG":884310, "CATGA":3360508, "CATGT":3637045, "CATGC":1840260, "CATGG":2381047, "CACAA":3884425, "CACAT":3308081, "CACAC":7289998, "CACAG":3743497, "CACTA":1418288, "CACTT":2480425, "CACTC":1387285, "CACTG":2885741, "CACCA":2338837, "CACCT":2693799, "CACCC":775802, "CACCG":856146, "CACGA":804345, "CACGT":3530151, "CACGC":716679, "CACGG":908575, "CAGAA":4717863, "CAGAT":4619563, "CAGAC":2868943, "CAGAG":5495655, "CAGTA":2915553, "CAGTT":3308831, "CAGTC":3471584, "CAGTG":3911168, "CAGCA":4479206, "CAGCT":3184990, "CAGCC":1791302, "CAGCG":1402340, "CAGGA":3748632, "CAGGT":2851909, "CAGGC":1605755, "CAGGG":2468467, "CTAAA":3048636, "CTAAT":1806183, "CTAAC":1092964, "CTAAG":1207861, "CTATA":1728090, "CTATT":1896710, "CTATC":814566, "CTATG":1456241, "CTACA":2230120, "CTACT":1545152, "CTACC":578665, "CTACG":552022, "CTAGA":1463207, "CTAGT":1352313, "CTAGC":711220, "CTAGG":717699, "CTTAA":3119303, "CTTAT":1826457, "CTTAC":1107025, "CTTAG":1244338, "CTTTA":3325211, "CTTTT":4530105, "CTTTC":2052485, "CTTTG":3591214, "CTTCA":2974465, "CTTCT":2751423, "CTTCC":1483252, "CTTCG":569836, "CTTGA":2562786, "CTTGT":2723880, "CTTGC":1522738, "CTTGG":1953707, "CTCAA":2236759, "CTCAT":2270172, "CTCAC":1476292, "CTCAG":2326534, "CTCTA":1471323, "CTCTT":2313005, "CTCTC":2009372, "CTCTG":3130678, "CTCCA":3687092, "CTCCT":2282773, "CTCCC":1023985, "CTCCG":918664, "CTCGA":629942, "CTCGT":1084457, "CTCGC":586026, "CTCGG":752133, "CTGAA":6805533, "CTGAT":3180908, "CTGAC":2215590, "CTGAG":3339931, "CTGTA":3113946, "CTGTT":4128128, "CTGTC":2352672, "CTGTG":4167911, "CTGCA":3612470, "CTGCT":3653941, "CTGCC":1446386, "CTGCG":908645, "CTGGA":3244829, "CTGGT":2992045, "CTGGC":1637605, "CTGGG":2292158, "CCAAA":2931243, "CCAAT":1538602, "CCAAC":1528985, "CCAAG":1513473, "CCATA":1416183, "CCATT":1862038, "CCATC":1482508, "CCATG":1910723, "CCACA":2331974, "CCACT":1405152, "CCACC":1113092, "CCACG":778261, "CCAGA":2811806, "CCAGT":3121574, 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"GC":[0.666872,0.467229,0.419639,0.458126,0.428142,0.384748,0.402467,0.444535,0.461644,0.383384,0.51905,0.484282,0.435797,0.423491,0.423669,0.420133,0.423629,0.415538,0.420666,0.416906,0.420189,0.421418,0.422293,0.412481,0.420188,0.414181,0.414196,0.414576,0.418218,0.411692,0.417817,0.412364,0.413024,0.41566,0.416914,0.413063,0.418537,0.413605,0.414655,0.41511,0.416823,0.410239,0.417617,0.415791,0.417526,0.416653,0.417707,0.410617,0.418906,0.411544,0.414129,0.41296,0.416296,0.411844,0.417671,0.415495,0.414199,0.41484,0.417311,0.410861,0.418257,0.413306,0.412795,0.4167,0.417818,0.413558,0.418925,0.414461,0.414838,0.416073,0.418517,0.413377,0.419165,0.41488,0.415334,0.417135,0.419384,0.416237,0.420821,0.417577,0.419881,0.420031,0.422296,0.418417,0.425101,0.420922,0.422418,0.424413,0.426672,0.422019,0.428354,0.42559,0.42755,0.426843,0.42988,0.426185,0.430981,0.428435,0.430366,0.431999,0.434045] }, "kmer_count": { "AAAAA":13660109, "AAAAT":6238848, "AAAAC":5394796, "AAAAG":4697847, 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"TACCG":543180, "TACGA":810153, "TACGT":1031180, "TACGC":560309, "TACGG":631411, "TAGAA":2189823, "TAGAT":2927327, "TAGAC":1365861, "TAGAG":1568460, "TAGTA":1753276, "TAGTT":2434237, "TAGTC":1391651, "TAGTG":1497668, "TAGCA":1901114, "TAGCT":1814796, "TAGCC":1020014, "TAGCG":432153, "TAGGA":1105931, "TAGGT":846745, "TAGGC":695023, "TAGGG":2394701, "TTAAA":6795091, "TTAAT":5081299, "TTAAC":3450586, "TTAAG":2691790, "TTATA":3901132, "TTATT":7844829, "TTATC":3282573, "TTATG":3209131, "TTACA":4863948, "TTACT":3367786, "TTACC":1936955, "TTACG":719493, "TTAGA":2366791, "TTAGT":2349501, "TTAGC":1728458, "TTAGG":1022864, "TTTAA":7452988, "TTTAT":8131557, "TTTAC":4177998, "TTTAG":3168724, "TTTTA":8751689, "TTTTT":18802059, "TTTTC":7389015, "TTTTG":6732188, "TTTCA":6413915, "TTTCT":7796986, "TTTCC":4542267, "TTTCG":903702, "TTTGA":5085898, "TTTGT":7655616, "TTTGC":3781910, "TTTGG":3010750, "TTCAA":4615132, "TTCAT":5698427, "TTCAC":4231439, "TTCAG":4240378, "TTCTA":3427925, "TTCTT":7274368, 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"GC":[0.39879,0.40987,0.40687,0.40713,0.407021,0.409817,0.405726,0.409439,0.404402,0.410179,0.404867,0.408043,0.404951,0.411576,0.405837,0.407924,0.405166,0.407053,0.406588,0.411472,0.406868,0.410144,0.408927,0.410507,0.40864,0.413819,0.406896,0.410995,0.410497,0.409969,0.409853,0.412686,0.407221,0.411876,0.409678,0.412939,0.41133,0.415477,0.411556,0.416023,0.410707,0.410839,0.410207,0.411728,0.407528,0.412142,0.410078,0.41165,0.41047,0.412961,0.408748,0.411207,0.412729,0.410018,0.411071,0.413068,0.407575,0.412082,0.409533,0.411,0.410215,0.412986,0.409336,0.412172,0.409469,0.409643,0.410381,0.412108,0.405722,0.410237,0.410236,0.409834,0.408367,0.412834,0.406942,0.409451,0.409218,0.410264,0.411097,0.414116,0.409686,0.413608,0.411696,0.41047,0.412609,0.414199] }, "kmer_count": { "AAAAA":16877273, "AAAAT":7457329, "AAAAC":5710359, "AAAAG":6969057, "AAATA":7279105, "AAATT":3838000, "AAATC":3114219, "AAATG":5920854, "AAACA":7691293, "AAACT":3836207, "AAACC":2107764, "AAACG":1336753, 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"AGGCT":1883281, "AGGCC":1285714, "AGGCG":913164, "AGGGA":2928217, "AGGGT":2217527, "AGGGC":1541260, "AGGGG":2906368, "TAAAA":7637137, "TAAAT":5189557, "TAAAC":3107811, "TAAAG":3769566, "TAATA":3811206, "TAATT":3133708, "TAATC":1640191, "TAATG":3578090, "TAACA":3139941, "TAACT":1945124, "TAACC":978651, "TAACG":749035, "TAAGA":2671665, "TAAGT":2054699, "TAAGC":1190246, "TAAGG":1899525, "TATAA":3324301, "TATAT":4347897, "TATAC":1639081, "TATAG":1710908, "TATTA":3416908, "TATTT":5021758, "TATTC":1849135, "TATTG":2509187, "TATCA":2142070, "TATCT":1835993, "TATCC":1028912, "TATCG":516604, "TATGA":2448244, "TATGT":3267093, "TATGC":1261995, "TATGG":1594372, "TACAA":3355116, "TACAT":2976817, "TACAC":1854768, "TACAG":2961416, "TACTA":1392638, "TACTT":2151922, "TACTC":1081743, "TACTG":2502444, "TACCA":1243995, "TACCT":966249, "TACCC":583059, "TACCG":492375, "TACGA":685493, "TACGT":744046, "TACGC":388108, "TACGG":466385, "TAGAA":2838949, "TAGAT":2068296, "TAGAC":1170165, "TAGAG":2133056, 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"CACAT":2849653, "CACAC":3721598, "CACAG":3112336, "CACTA":1211954, "CACTT":2093624, "CACTC":1216381, "CACTG":2470324, "CACCA":1985752, "CACCT":1473137, "CACCC":689723, "CACCG":730866, "CACGA":656435, "CACGT":890301, "CACGC":638103, "CACGG":755098, "CAGAA":3914665, "CAGAT":2694805, "CAGAC":2454193, "CAGAG":4373893, "CAGTA":2335288, "CAGTT":2773801, "CAGTC":1861700, "CAGTG":3267905, "CAGCA":3754116, "CAGCT":2768173, "CAGCC":1583323, "CAGCG":1169309, "CAGGA":3068607, "CAGGT":2373610, "CAGGC":1377481, "CAGGG":1979359, "CTAAA":2574450, "CTAAT":1510174, "CTAAC":931848, "CTAAG":1009261, "CTATA":1387401, "CTATT":1580290, "CTATC":698666, "CTATG":1193062, "CTACA":1889315, "CTACT":1292303, "CTACC":505182, "CTACG":468680, "CTAGA":1071656, "CTAGT":1150719, "CTAGC":607991, "CTAGG":622425, "CTTAA":2159850, "CTTAT":1503818, "CTTAC":950711, "CTTAG":1035844, "CTTTA":2760686, "CTTTT":3761029, "CTTTC":1751766, "CTTTG":2998022, "CTTCA":2568746, "CTTCT":2349383, "CTTCC":1312455, "CTTCG":467990, 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"GC":[0.417594,0.421195,0.413179,0.418357,0.414991,0.418065,0.419623,0.420456,0.410747,0.418481,0.412356,0.412235,0.412799,0.416236,0.409817,0.415497,0.410125,0.410611,0.413229,0.4145,0.410879,0.416446,0.411425,0.412015,0.412732,0.414081,0.407404,0.414939,0.413376,0.414574,0.414089,0.415333,0.408143,0.416608,0.409161,0.411539,0.410768,0.414036,0.409954,0.415584,0.413319,0.41187,0.412605,0.414826,0.408394,0.415588,0.411414,0.409697,0.414532,0.416232,0.410968,0.415351,0.41014,0.410932,0.413157,0.414255,0.410071,0.415163,0.410068,0.408979,0.411572,0.41229,0.407801,0.412863,0.407947,0.410307,0.411266,0.411792,0.40631,0.411929,0.407697,0.408911,0.411824,0.41269,0.407945,0.413444,0.411552,0.412807,0.412816,0.414603,0.410482,0.415977,0.411249,0.411704,0.414197,0.414095] }, "kmer_count": { "AAAAA":10602443, "AAAAT":5305119, "AAAAC":4545953, "AAAAG":3918515, "AAATA":5223726, "AAATT":3424423, "AAATC":3057426, "AAATG":4461202, "AAACA":6233047, "AAACT":3489635, "AAACC":2974545, "AAACG":1231222, 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"AGGCA":1320033, "AGGCT":1513577, "AGGCC":1254646, "AGGCG":529005, "AGGGA":1796407, "AGGGT":853137, "AGGGC":870035, "AGGGG":780652, "TAAAA":5207116, "TAAAT":4437356, "TAAAC":3176133, "TAAAG":2862490, "TAATA":3448962, "TAATT":3680041, "TAATC":2305403, "TAATG":2760040, "TAACA":3520645, "TAACT":2375969, "TAACC":1686825, "TAACG":802170, "TAAGA":1819712, "TAAGT":1822359, "TAAGC":1230499, "TAAGG":944797, "TATAA":3067793, "TATAT":4465614, "TATAC":2089477, "TATAG":1397190, "TATTA":3727074, "TATTT":6964584, "TATTC":2599586, "TATTG":2754565, "TATCA":2625353, "TATCT":2796068, "TATCC":1862057, "TATCG":659630, "TATGA":2384634, "TATGT":2902993, "TATGC":1483951, "TATGG":1231247, "TACAA":3364715, "TACAT":3722151, "TACAC":3102900, "TACAG":2667167, "TACTA":2417760, "TACTT":2955956, "TACTC":1788794, "TACTG":2477247, "TACCA":1869616, "TACCT":1823347, "TACCC":1152228, "TACCG":445169, "TACGA":660969, "TACGT":865341, "TACGC":462451, "TACGG":526329, "TAGAA":1854695, "TAGAT":1943464, "TAGAC":1145745, 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"CACAA":3601205, "CACAT":4202046, "CACAC":8871460, "CACAG":3612897, "CACTA":2169732, "CACTT":3316159, "CACTC":2945892, "CACTG":3234793, "CACCA":3393939, "CACCT":2638177, "CACCC":2152607, "CACCG":1079817, "CACGA":746036, "CACGT":916996, "CACGC":1120395, "CACGG":744111, "CAGAA":2916012, "CAGAT":2996106, "CAGAC":2905014, "CAGAG":2847337, "CAGTA":2481276, "CAGTT":3018678, "CAGTC":2507185, "CAGTG":2493214, "CAGCA":4022511, "CAGCT":3157247, "CAGCC":2423362, "CAGCG":1110584, "CAGGA":2387289, "CAGGT":1877781, "CAGGC":1469217, "CAGGG":1254182, "CTAAA":2617542, "CTAAT":2193823, "CTAAC":1766886, "CTAAG":1061194, "CTATA":1771256, "CTATT":2240939, "CTATC":1556189, "CTATG":1440761, "CTACA":2888477, "CTACT":2666184, "CTACC":1551840, "CTACG":836871, "CTAGA":1090759, "CTAGT":986993, "CTAGC":854489, "CTAGG":530685, "CTTAA":2658963, "CTTAT":2282911, "CTTAC":1748831, "CTTAG":987385, "CTTTA":3694648, "CTTTT":6337842, "CTTTC":3532477, "CTTTG":3474934, "CTTCA":4024992, "CTTCT":5299283, "CTTCC":3203602, 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"CGTAG":500741, "CGTTA":747030, "CGTTT":1281152, "CGTTC":810494, "CGTTG":729417, "CGTCA":1086510, "CGTCT":1323576, "CGTCC":986898, "CGTCG":1186379, "CGTGA":1265482, "CGTGT":1993179, "CGTGC":610046, "CGTGG":690971, "CGCAA":652192, "CGCAT":712464, "CGCAC":792408, "CGCAG":837579, "CGCTA":561591, "CGCTT":874903, "CGCTC":998676, "CGCTG":1128840, "CGCCA":978369, "CGCCT":931372, "CGCCC":964913, "CGCCG":651001, "CGCGA":236805, "CGCGT":304829, "CGCGC":239833, "CGCGG":453375, "CGGAA":1131713, "CGGAT":496958, "CGGAC":672260, "CGGAG":858434, "CGGTA":490201, "CGGTT":656685, "CGGTC":505032, "CGGTG":875745, "CGGCA":751849, "CGGCT":818565, "CGGCC":822331, "CGGCG":508481, "CGGGA":547819, "CGGGT":371673, "CGGGC":429696, "CGGGG":506155, "GAAAA":3903282, "GAAAT":2826065, "GAAAC":2419404, "GAAAG":2497437, "GAATA":1886069, "GAATT":1952168, "GAATC":1302069, "GAATG":1768232, "GAACA":2438243, "GAACT":1545239, "GAACC":1422444, "GAACG":1267330, "GAAGA":2928565, "GAAGT":1824283, "GAAGC":1594861, "GAAGG":1317745, "GATAA":1880996, "GATAT":1941137, "GATAC":1136813, "GATAG":749042, "GATTA":1687721, "GATTT":2950684, "GATTC":1387148, "GATTG":1456226, "GATCA":2084792, "GATCT":1687187, "GATCC":1259233, "GATCG":1216263, "GATGA":2433474, "GATGT":2297706, "GATGC":1487105, "GATGG":1363763, "GACAA":2514565, "GACAT":2599366, "GACAC":2105101, "GACAG":2075233, "GACTA":1194790, "GACTT":2062173, "GACTC":1673616, "GACTG":1886514, "GACCA":2040951, "GACCT":1577498, "GACCC":1252582, "GACCG":608406, "GACGA":879206, "GACGT":806103, "GACGC":780553, "GACGG":730695, "GAGAA":2330101, "GAGAT":1823497, "GAGAC":1725065, "GAGAG":1930090, "GAGTA":1106865, "GAGTT":1701877, "GAGTC":1244777, "GAGTG":1911339, "GAGCA":1831751, "GAGCT":1758999, "GAGCC":1313424, "GAGCG":1765068, "GAGGA":2137247, "GAGGT":1168497, "GAGGC":1281105, "GAGGG":1010148, "GTAAA":2735676, "GTAAT":2079668, "GTAAC":1500939, "GTAAG":984307, "GTATA":1650224, "GTATT":2630315, "GTATC":1448989, "GTATG":1455087, "GTACA":2184749, "GTACT":1800132, "GTACC":888915, "GTACG":505018, "GTAGA":1592887, "GTAGT":1352446, "GTAGC":989583, "GTAGG":1251430, "GTTAA":2309816, "GTTAT":2141431, "GTTAC":1429151, "GTTAG":979862, "GTTTA":3066186, "GTTTT":5416231, "GTTTC":2742021, "GTTTG":3310390, "GTTCA":2409967, "GTTCT":2245674, "GTTCC":1624690, "GTTCG":475850, "GTTGA":1862805, "GTTGT":2843045, "GTTGC":1553406, "GTTGG":1300591, "GTCAA":2005297, "GTCAT":2430127, "GTCAC":1875856, "GTCAG":1909068, "GTCTA":1187904, "GTCTT":2482222, "GTCTC":2344020, "GTCTG":2454547, "GTCCA":1988402, "GTCCT":2347084, "GTCCC":1373556, "GTCCG":629170, "GTCGA":473264, "GTCGT":1295978, "GTCGC":809475, "GTCGG":601506, "GTGAA":2713557, "GTGAT":1854289, "GTGAC":1654591, "GTGAG":1887991, "GTGTA":2750507, "GTGTT":3199471, "GTGTC":1938348, "GTGTG":4400996, "GTGCA":1896177, "GTGCT":1894299, "GTGCC":1217056, "GTGCG":507165, "GTGGA":1655803, "GTGGT":1539302, "GTGGC":1139718, "GTGGG":879012, "GCAAA":2409960, "GCAAT":1432243, "GCAAC":1901802, "GCAAG":1328261, "GCATA":1284110, "GCATT":2237431, "GCATC":1807832, "GCATG":1627790, "GCACA":2320798, "GCACT":1957115, "GCACC":1467548, "GCACG":516889, "GCAGA":2428309, "GCAGT":1900409, "GCAGC":2702105, "GCAGG":1560633, "GCTAA":1471855, "GCTAT":1246369, "GCTAC":1268848, "GCTAG":625110, "GCTTA":1172476, "GCTTT":3127378, "GCTTC":2281184, "GCTTG":1176206, "GCTCA":2107798, "GCTCT":2270397, "GCTCC":1893320, "GCTCG":627102, "GCTGA":2214340, "GCTGT":2870414, "GCTGC":2597585, "GCTGG":1651943, "GCCAA":1907261, "GCCAT":1950019, "GCCAC":1577626, "GCCAG":1467229, "GCCTA":768448, "GCCTT":2088116, "GCCTC":2005936, "GCCTG":1408669, "GCCCA":1384470, "GCCCT":1510382, "GCCCC":1419462, "GCCCG":603390, "GCCGA":618186, "GCCGT":885624, "GCCGC":695373, "GCCGG":558003, "GCGAA":328643, "GCGAT":386013, "GCGAC":643088, "GCGAG":539741, "GCGTA":399023, "GCGTT":711439, "GCGTC":1336435, "GCGTG":1057203, "GCGCA":496913, "GCGCT":614259, "GCGCC":675678, "GCGCG":277888, "GCGGA":471583, "GCGGT":451428, "GCGGC":629271, "GCGGG":387254, "GGAAA":2842638, "GGAAT":1248902, "GGAAC":1153775, "GGAAG":1969869, "GGATA":1031147, "GGATT":1267474, "GGATC":1063518, "GGATG":1367302, "GGACA":1912821, "GGACT":1469579, "GGACC":1013887, "GGACG":696685, "GGAGA":1892343, "GGAGT":1161197, "GGAGC":1322638, "GGAGG":1607799, "GGTAA":1055288, "GGTAT":1049003, "GGTAC":727268, "GGTAG":537327, "GGTTA":1001190, "GGTTT":2069059, "GGTTC":1126219, "GGTTG":1063314, "GGTCA":1400857, "GGTCT":1222805, "GGTCC":847845, "GGTCG":521275, "GGTGA":1315961, "GGTGT":1452048, "GGTGC":1177828, "GGTGG":1132847, "GGCAA":1293263, "GGCAT":1117200, "GGCAC":954234, "GGCAG":1300679, "GGCTA":796434, "GGCTT":1501747, "GGCTC":1371186, "GGCTG":1622245, "GGCCA":1360948, "GGCCT":1294947, "GGCCC":939628, "GGCCG":728358, "GGCGA":427449, "GGCGT":586389, "GGCGC":419109, "GGCGG":524461, "GGGAA":1705101, "GGGAT":858108, "GGGAC":903416, "GGGAG":972697, "GGGTA":595686, "GGGTT":888240, "GGGTC":654273, "GGGTG":736611, "GGGCA":828662, "GGGCT":1010203, "GGGCC":843988, "GGGCG":414685, "GGGGA":732844, "GGGGT":546378, "GGGGC":723415, "GGGGG":748281 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_213555_sample_1703717_S25_L001_R1_001.fastq.gz --in2 lib_213555_sample_1703717_S25_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213555_sample_1703717_S25_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213555_sample_1703717_S25_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213555_sample_1703717_S25_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213555_sample_1703717_S25_L001_R2_001.fastp-trim.fq.gz " }