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"GC":[0.676911,0.509191,0.412878,0.447036,0.405698,0.411493,0.332967,0.406404,0.472735,0.34273,0.499909,0.489258,0.420528,0.419949,0.410985,0.429692,0.440358,0.414684,0.441157,0.413437,0.441423,0.415897,0.421318,0.431492,0.420833,0.435496,0.437086,0.416335,0.441899,0.413934,0.4382,0.414963,0.438126,0.417719,0.440613,0.43536,0.421236,0.435887,0.42248,0.414383,0.423004,0.415065,0.440465,0.416962,0.419381,0.436074,0.42844,0.431265,0.441253,0.41694,0.420903,0.415787,0.4412,0.435821,0.440839,0.436038,0.424672,0.436937,0.429849,0.419995,0.441807,0.42672,0.441806,0.437757,0.435405,0.421326,0.444827,0.42643,0.426956,0.427952,0.438373,0.4367,0.44315,0.440802,0.444543,0.441696,0.446618,0.440068,0.447512,0.441738,0.445643,0.439767,0.444925,0.440605,0.446056,0.44325,0.446008,0.443904,0.450319,0.442343,0.450239,0.445183,0.447682,0.446882,0.450177,0.446546,0.45105,0.448265,0.451535,0.447416,0.456218] }, "kmer_count": { "AAAAA":6901197, "AAAAT":4530296, "AAAAC":3143359, "AAAAG":3871571, 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"CATCA":1898418, "CATCT":1960363, "CATCC":871326, "CATCG":621262, "CATGA":1875769, "CATGT":2437251, "CATGC":1107434, "CATGG":1931910, "CACAA":2105598, "CACAT":1818882, "CACAC":5263821, "CACAG":2555607, "CACTA":1227667, "CACTT":1256244, "CACTC":909469, "CACTG":2863152, "CACCA":1338407, "CACCT":968684, "CACCC":580717, "CACCG":404976, "CACGA":471245, "CACGT":2548467, "CACGC":355076, "CACGG":464573, "CAGAA":3001187, "CAGAT":2914837, "CAGAC":2445518, "CAGAG":5585570, "CAGTA":3204340, "CAGTT":1888692, "CAGTC":2669074, "CAGTG":3090686, "CAGCA":2220975, "CAGCT":1760069, "CAGCC":1032383, "CAGCG":672411, "CAGGA":2498804, "CAGGT":2149320, "CAGGC":1119501, "CAGGG":2433952, "CTAAA":1774360, "CTAAT":1220784, "CTAAC":979011, "CTAAG":839531, "CTATA":1813151, "CTATT":1407444, "CTATC":676924, "CTATG":1415441, "CTACA":1714864, "CTACT":1065547, "CTACC":627937, "CTACG":402794, "CTAGA":1409899, "CTAGT":1565320, "CTAGC":812337, "CTAGG":1073048, "CTTAA":1067614, "CTTAT":1060320, "CTTAC":690333, "CTTAG":667319, "CTTTA":1580792, "CTTTT":1766902, "CTTTC":1141999, "CTTTG":1556173, "CTTCA":1473110, "CTTCT":1446100, "CTTCC":815533, "CTTCG":356515, "CTTGA":1512371, "CTTGT":1543532, "CTTGC":779010, "CTTGG":1262986, "CTCAA":2291335, "CTCAT":1171259, "CTCAC":794977, "CTCAG":1433469, "CTCTA":1003180, "CTCTT":1103336, "CTCTC":1600636, "CTCTG":1843242, "CTCCA":2584491, "CTCCT":1188231, "CTCCC":642508, "CTCCG":381549, "CTCGA":361250, "CTCGT":825285, "CTCGC":242141, "CTCGG":371525, "CTGAA":3725967, "CTGAT":1682242, "CTGAC":1473033, "CTGAG":2008806, "CTGTA":2665521, "CTGTT":2341794, "CTGTC":1730412, "CTGTG":2870599, "CTGCA":1686126, "CTGCT":2619333, "CTGCC":907048, "CTGCG":469921, "CTGGA":2023542, "CTGGT":2021857, "CTGGC":1076818, "CTGGG":2058033, "CCAAA":1726569, "CCAAT":1147474, "CCAAC":865679, "CCAAG":855320, "CCATA":1084593, "CCATT":1373337, "CCATC":865213, "CCATG":1365195, "CCACA":1416246, "CCACT":987000, "CCACC":713101, "CCACG":350402, "CCAGA":1698773, "CCAGT":2525245, "CCAGC":908523, 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"GC":[0.41751,0.42842,0.420302,0.429321,0.419264,0.429413,0.421896,0.426954,0.419528,0.426554,0.423489,0.425191,0.421997,0.430282,0.41981,0.426641,0.420681,0.426275,0.42353,0.428522,0.423602,0.426705,0.424143,0.428267,0.420181,0.428791,0.420712,0.428412,0.422546,0.424489,0.423862,0.427671,0.418775,0.428805,0.421618,0.425607,0.420707,0.42908,0.423117,0.427868,0.423026,0.427034,0.423715,0.428544,0.422271,0.428388,0.422411,0.42801,0.423688,0.429678,0.421322,0.430501,0.424456,0.427963,0.421897,0.429236,0.422029,0.427598,0.424798,0.428064,0.424889,0.429343,0.422096,0.429356,0.42317,0.426501,0.420308,0.425527,0.420674,0.425894,0.422209,0.424728,0.422181,0.428351,0.419242,0.427511,0.421906,0.424389,0.42366,0.426338,0.421925,0.42624,0.42176,0.425422,0.419692,0.427901] }, "kmer_count": { "AAAAA":5399015, "AAAAT":3699446, "AAAAC":2565741, "AAAAG":2963941, "AAATA":4032533, "AAATT":1901633, "AAATC":1486753, "AAATG":3239286, "AAACA":4145935, "AAACT":1606046, "AAACC":1083841, "AAACG":744272, 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"CACAT":1541734, "CACAC":2522897, "CACAG":2086314, "CACTA":1026812, "CACTT":1066542, "CACTC":783737, "CACTG":1610246, "CACCA":1145404, "CACCT":846476, "CACCC":511173, "CACCG":353485, "CACGA":371922, "CACGT":465699, "CACGC":299885, "CACGG":386434, "CAGAA":2392614, "CAGAT":1696218, "CAGAC":2024628, "CAGAG":4344716, "CAGTA":2580046, "CAGTT":1563497, "CAGTC":1278146, "CAGTG":2513678, "CAGCA":1831299, "CAGCT":1494937, "CAGCC":894188, "CAGCG":565942, "CAGGA":2011654, "CAGGT":1769210, "CAGGC":945150, "CAGGG":1944115, "CTAAA":1468235, "CTAAT":1005554, "CTAAC":821555, "CTAAG":678336, "CTATA":1432353, "CTATT":1169416, "CTATC":576575, "CTATG":1151002, "CTACA":1424631, "CTACT":895638, "CTACC":546746, "CTACG":352918, "CTAGA":1060912, "CTAGT":1289973, "CTAGC":691717, "CTAGG":871637, "CTTAA":892644, "CTTAT":886941, "CTTAC":575233, "CTTAG":553875, "CTTTA":1288703, "CTTTT":1463325, "CTTTC":970648, "CTTTG":1276218, "CTTCA":1256699, "CTTCT":1133019, "CTTCC":718824, "CTTCG":225845, "CTTGA":1179819, 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"GC":[0.429783,0.430414,0.423473,0.429752,0.423592,0.432329,0.429406,0.430916,0.42263,0.43,0.424991,0.426179,0.426019,0.430216,0.421536,0.428985,0.421583,0.427878,0.424942,0.42839,0.421965,0.430071,0.422706,0.42796,0.424079,0.429586,0.421215,0.431193,0.423565,0.427468,0.424582,0.427487,0.421789,0.43158,0.42326,0.426939,0.423414,0.428296,0.421997,0.429485,0.423001,0.42688,0.422024,0.428167,0.419971,0.429212,0.420727,0.42571,0.423467,0.426898,0.420527,0.428268,0.421168,0.424783,0.423627,0.427318,0.420284,0.426907,0.419242,0.424369,0.423198,0.426838,0.418212,0.426367,0.419479,0.426075,0.420451,0.425575,0.418188,0.426213,0.420388,0.423914,0.421344,0.424672,0.41763,0.428896,0.420413,0.423989,0.421106,0.425043,0.420231,0.427352,0.418854,0.423468,0.421593,0.425942] }, "kmer_count": { "AAAAA":3972793, "AAAAT":2789767, "AAAAC":2131298, "AAAAG":1572578, "AAATA":2913557, "AAATT":1695804, "AAATC":1569855, "AAATG":2405669, "AAACA":3209237, "AAACT":1812987, "AAACC":1590915, "AAACG":603133, 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"AGGCC":886661, "AGGCG":296054, "AGGGA":787571, "AGGGT":634043, "AGGGC":548985, "AGGGG":476577, "TAAAA":2502419, "TAAAT":2224133, "TAAAC":1802205, "TAAAG":1344031, "TAATA":2026770, "TAATT":1911195, "TAATC":1206646, "TAATG":1743492, "TAACA":2385710, "TAACT":1723767, "TAACC":2262290, "TAACG":424906, "TAAGA":911925, "TAAGT":897048, "TAAGC":580378, "TAAGG":577178, "TATAA":1936271, "TATAT":3534251, "TATAC":1972253, "TATAG":1464659, "TATTA":2250556, "TATTT":3821578, "TATTC":2108543, "TATTG":1680230, "TATCA":2262581, "TATCT":2775105, "TATCC":1848694, "TATCG":444687, "TATGA":1402367, "TATGT":2068850, "TATGC":963743, "TATGG":931077, "TACAA":1947684, "TACAT":2789613, "TACAC":2777283, "TACAG":2211444, "TACTA":2761480, "TACTT":1675240, "TACTC":1875468, "TACTG":2518630, "TACCA":2106471, "TACCT":2172096, "TACCC":1644893, "TACCG":440457, "TACGA":375654, "TACGT":499815, "TACGC":309948, "TACGG":297573, "TAGAA":1357968, "TAGAT":1055446, "TAGAC":1186011, "TAGAG":885387, "TAGTA":1032026, "TAGTT":1379215, 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"TTGAT":1674311, "TTGAC":1483696, "TTGAG":1189913, "TTGTA":1756751, "TTGTT":2953847, "TTGTC":1812054, "TTGTG":1741258, "TTGCA":1402219, "TTGCT":1451026, "TTGCC":1031146, "TTGCG":303361, "TTGGA":1209203, "TTGGT":1189764, "TTGGC":874157, "TTGGG":701417, "TCAAA":2149268, "TCAAT":2061971, "TCAAC":1840744, "TCAAG":1209078, "TCATA":1859818, "TCATT":3021630, "TCATC":2499392, "TCATG":1577261, "TCACA":2828720, "TCACT":3066128, "TCACC":2068627, "TCACG":485393, "TCAGA":1711139, "TCAGT":1981594, "TCAGC":1387612, "TCAGG":971064, "TCTAA":1716624, "TCTAT":3433980, "TCTAC":2967699, "TCTAG":1108021, "TCTTA":1525860, "TCTTT":3858065, "TCTTC":3169151, "TCTTG":1317167, "TCTCA":3126096, "TCTCT":19167574, "TCTCC":5121522, "TCTCG":863609, "TCTGA":1991860, "TCTGT":5355435, "TCTGC":1805536, "TCTGG":1265536, "TCCAA":1666444, "TCCAT":2801390, "TCCAC":2459084, "TCCAG":1663417, "TCCTA":1708159, "TCCTT":2606149, "TCCTC":4896701, "TCCTG":1950423, "TCCCA":1970866, "TCCCT":3502484, "TCCCC":2355025, "TCCCG":421257, 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"CACAG":2436966, "CACTA":2643386, "CACTT":1902118, "CACTC":3066999, "CACTG":2556937, "CACCA":2962831, "CACCT":2266388, "CACCC":1967358, "CACCG":554398, "CACGA":407885, "CACGT":578030, "CACGC":650306, "CACGG":412535, "CAGAA":1687642, "CAGAT":1469139, "CAGAC":1959699, "CAGAG":1648555, "CAGTA":1922126, "CAGTT":1677826, "CAGTC":1968552, "CAGTG":1603762, "CAGCA":2028303, "CAGCT":1744584, "CAGCC":1656132, "CAGCG":454953, "CAGGA":1302155, "CAGGT":1226598, "CAGGC":1026504, "CAGGG":833569, "CTAAA":1603927, "CTAAT":1415839, "CTAAC":1968486, "CTAAG":577960, "CTATA":2341596, "CTATT":2113938, "CTATC":2535052, "CTATG":1299877, "CTACA":2876790, "CTACT":3485907, "CTACC":2502531, "CTACG":437614, "CTAGA":985624, "CTAGT":1184285, "CTAGC":1063105, "CTAGG":729583, "CTTAA":1229040, "CTTAT":1496085, "CTTAC":1285096, "CTTAG":683354, "CTTTA":2181393, "CTTTT":2669012, "CTTTC":3257705, "CTTTG":1796648, "CTTCA":2321729, "CTTCT":3351269, "CTTCC":2358702, "CTTCG":404154, "CTTGA":1093130, "CTTGT":1439820, "CTTGC":890300, "CTTGG":701237, "CTCAA":1816947, "CTCAT":2295877, "CTCAC":2957137, "CTCAG":1635592, "CTCTA":3670110, "CTCTT":4016957, "CTCTC":17889344, "CTCTG":4263195, "CTCCA":3215799, "CTCCT":4787274, "CTCCC":3417677, "CTCCG":588326, "CTCGA":349853, "CTCGT":587549, "CTCGC":816686, "CTCGG":322224, "CTGAA":1671841, "CTGAT":1594112, "CTGAC":1986964, "CTGAG":1234212, "CTGTA":2866672, "CTGTT":3237732, "CTGTC":4501566, "CTGTG":2121668, "CTGCA":1773781, "CTGCT":2280761, "CTGCC":1701229, "CTGCG":360368, "CTGGA":1297993, "CTGGT":1302539, "CTGGC":1061453, "CTGGG":806383, "CCAAA":1860166, "CCAAT":1451433, "CCAAC":1785397, "CCAAG":1044083, "CCATA":1774835, "CCATT":2205696, "CCATC":2703598, "CCATG":1607958, "CCACA":2737285, "CCACT":2682848, "CCACC":2425741, "CCACG":567432, "CCAGA":1587218, "CCAGT":1701433, "CCAGC":1454662, "CCAGG":1166366, "CCTAA":1407543, "CCTAT":1574187, "CCTAC":2173519, "CCTAG":880702, "CCTTA":1379913, "CCTTT":2335678, "CCTTC":2502476, "CCTTG":1116503, "CCTCA":2409796, "CCTCT":5654327, "CCTCC":3895172, "CCTCG":538181, "CCTGA":1450464, "CCTGT":2417052, "CCTGC":1477134, "CCTGG":1192897, "CCCAA":1504690, "CCCAT":1792999, "CCCAC":2046920, "CCCAG":1652072, "CCCTA":2129469, "CCCTT":1911186, "CCCTC":3914833, "CCCTG":1881573, "CCCCA":2105482, "CCCCT":2641888, "CCCCC":2030834, "CCCCG":563295, "CCCGA":310256, "CCCGT":481953, "CCCGC":419743, "CCCGG":330167, "CCGAA":276054, "CCGAT":375860, "CCGAC":383155, "CCGAG":324746, "CCGTA":381653, "CCGTT":493942, "CCGTC":601164, "CCGTG":385442, "CCGCA":359736, "CCGCT":494025, "CCGCC":504214, "CCGCG":124617, "CCGGA":270729, "CCGGT":349360, "CCGGC":308006, "CCGGG":275950, "CGAAA":353919, "CGAAT":294073, "CGAAC":289155, "CGAAG":232144, "CGATA":348441, "CGATT":364155, "CGATC":342478, "CGATG":373640, "CGACA":504404, "CGACT":387473, "CGACC":430712, "CGACG":171647, "CGAGA":406287, "CGAGT":253608, "CGAGC":254060, "CGAGG":284209, "CGTAA":331636, "CGTAT":361832, "CGTAC":353542, "CGTAG":342336, "CGTTA":494350, "CGTTT":716706, "CGTTC":551588, "CGTTG":462105, "CGTCA":564765, "CGTCT":722443, "CGTCC":480109, "CGTCG":161540, "CGTGA":332984, "CGTGT":549677, "CGTGC":331131, "CGTGG":319963, "CGCAA":357263, "CGCAT":341145, "CGCAC":469280, "CGCAG":375524, "CGCTA":421500, "CGCTT":382981, "CGCTC":966045, "CGCTG":570054, "CGCCA":464816, "CGCCT":423800, "CGCCC":531931, "CGCCG":167057, "CGCGA":92188, "CGCGT":115320, "CGCGC":177005, "CGCGG":104244, "CGGAA":371960, "CGGAT":244130, "CGGAC":300321, "CGGAG":345937, "CGGTA":335320, "CGGTT":310734, "CGGTC":341018, "CGGTG":356293, "CGGCA":329798, "CGGCT":356959, "CGGCC":346983, "CGGCG":150580, "CGGGA":266437, "CGGGT":190138, "CGGGC":206115, "CGGGG":223941, "GAAAA":1687873, "GAAAT":1565604, "GAAAC":1297150, "GAAAG":1008243, "GAATA":1190795, "GAATT":1083180, "GAATC":770900, "GAATG":1150117, "GAACA":1562201, "GAACT":954436, "GAACC":886960, "GAACG":404731, "GAAGA":1181525, "GAAGT":940061, "GAAGC":705720, "GAAGG":758289, "GATAA":923291, "GATAT":1141218, "GATAC":791644, "GATAG":606732, "GATTA":977428, "GATTT":1508848, "GATTC":848851, "GATTG":899572, "GATCA":1006901, "GATCT":1040264, "GATCC":704650, "GATCG":361639, "GATGA":1209711, "GATGT":1337307, "GATGC":787505, "GATGG":808903, "GACAA":1400876, "GACAT":1612662, "GACAC":1614201, "GACAG":1501444, "GACTA":1072237, "GACTT":1030547, "GACTC":1066827, "GACTG":1333037, "GACCA":1415912, "GACCT":1013120, "GACCC":1020425, "GACCG":287691, "GACGA":414893, "GACGT":388130, "GACGC":295773, "GACGG":312899, "GAGAA":1284731, "GAGAT":988738, "GAGAC":1098218, "GAGAG":1494801, "GAGTA":718773, "GAGTT":844758, "GAGTC":680501, "GAGTG":845341, "GAGCA":895967, "GAGCT":878583, "GAGCC":752142, "GAGCG":302501, "GAGGA":1082963, "GAGGT":738088, "GAGGC":643950, "GAGGG":585102, "GTAAA":1516858, "GTAAT":1298226, "GTAAC":1046273, "GTAAG":600725, "GTATA":1499933, "GTATT":1764982, "GTATC":1044430, "GTATG":1069196, "GTACA":1545511, "GTACT":1171668, "GTACC":966998, "GTACG":277378, "GTAGA":962035, "GTAGT":952374, "GTAGC":796835, "GTAGG":595393, "GTTAA":1249641, "GTTAT":1440447, "GTTAC":1171022, "GTTAG":819771, "GTTTA":1617568, "GTTTT":2504816, "GTTTC":1760631, "GTTTG":1576390, "GTTCA":1463783, "GTTCT":1912282, "GTTCC":1149370, "GTTCG":238752, "GTTGA":1200511, "GTTGT":1675775, "GTTGC":826717, "GTTGG":754945, "GTCAA":1233767, "GTCAT":1646147, "GTCAC":1409591, "GTCAG":1266894, "GTCTA":1257856, "GTCTT":1504968, "GTCTC":2899150, "GTCTG":2075626, "GTCCA":1308991, "GTCCT":1566982, "GTCCC":1243296, "GTCCG":262993, "GTCGA":254944, "GTCGT":362398, "GTCGC":275765, "GTCGG":236368, "GTGAA":1134425, "GTGAT":1007149, "GTGAC":932237, "GTGAG":737402, "GTGTA":1342722, "GTGTT":1966494, "GTGTC":1344915, "GTGTG":2598902, "GTGCA":1022689, "GTGCT":1005403, "GTGCC":747106, "GTGCG":271717, "GTGGA":938727, "GTGGT":933186, "GTGGC":699836, "GTGGG":572806, "GCAAA":1101327, "GCAAT":917403, "GCAAC":915306, "GCAAG":683418, "GCATA":868280, "GCATT":1279687, "GCATC":993585, "GCATG":945766, "GCACA":1455104, "GCACT":1047717, "GCACC":923118, "GCACG":307682, "GCAGA":1055280, "GCAGT":1018425, "GCAGC":1139750, "GCAGG":832133, "GCTAA":880398, "GCTAT":1035267, "GCTAC":1155618, "GCTAG":702979, "GCTTA":589296, "GCTTT":1504477, "GCTTC":1082749, "GCTTG":680683, "GCTCA":1070786, "GCTCT":1992069, "GCTCC":1091069, "GCTCG":299594, "GCTGA":1076763, "GCTGT":1671287, "GCTGC":1203573, "GCTGG":838971, "GCCAA":1069064, "GCCAT":1297151, "GCCAC":1131034, "GCCAG":924200, "GCCTA":839318, "GCCTT":1129547, "GCCTC":1285832, "GCCTG":953798, "GCCCA":1035584, "GCCCT":1118083, "GCCCC":975901, "GCCCG":246715, "GCCGA":277711, "GCCGT":304046, "GCCGC":303147, "GCCGG":253435, "GCGAA":226844, "GCGAT":214506, "GCGAC":233096, "GCGAG":210147, "GCGTA":196381, "GCGTT":348398, "GCGTC":290014, "GCGTG":300672, "GCGCA":272143, "GCGCT":351133, "GCGCC":252337, "GCGCG":119831, "GCGGA":178766, "GCGGT":234857, "GCGGC":216872, "GCGGG":166172, "GGAAA":1217490, "GGAAT":887610, "GGAAC":785321, "GGAAG":800004, "GGATA":631132, "GGATT":828160, "GGATC":626127, "GGATG":768994, "GGACA":1198058, "GGACT":820846, "GGACC":686670, "GGACG":280497, "GGAGA":1089807, "GGAGT":704427, "GGAGC":656637, "GGAGG":810827, "GGTAA":745798, "GGTAT":778755, "GGTAC":657298, "GGTAG":545888, "GGTTA":741687, "GGTTT":1089243, "GGTTC":627833, "GGTTG":707686, "GGTCA":991817, "GGTCT":933077, "GGTCC":613592, "GGTCG":207079, "GGTGA":752144, "GGTGT":1044622, "GGTGC":544333, "GGTGG":652003, "GGCAA":690000, "GGCAT":749839, "GGCAC":660320, "GGCAG":797314, "GGCTA":812081, "GGCTT":745109, "GGCTC":747974, "GGCTG":927939, "GGCCA":950077, "GGCCT":864396, "GGCCC":627950, "GGCCG":253834, "GGCGA":226491, "GGCGT":212660, "GGCGC":218835, "GGCGG":229885, "GGGAA":707566, "GGGAT":574431, "GGGAC":540435, "GGGAG":606858, "GGGTA":496309, "GGGTT":579826, "GGGTC":449427, "GGGTG":555194, "GGGCA":498535, "GGGCT":494821, "GGGCC":496544, "GGGCG":169960, "GGGGA":488910, "GGGGT":446166, "GGGGC":339297, "GGGGG":651516 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_213514_sample_1703781_S60_L001_R1_001.fastq.gz --in2 lib_213514_sample_1703781_S60_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213514_sample_1703781_S60_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213514_sample_1703781_S60_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213514_sample_1703781_S60_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213514_sample_1703781_S60_L001_R2_001.fastp-trim.fq.gz " }