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"CGATT":834710, "CGATC":839196, "CGATG":1518411, "CGACA":1336166, "CGACT":811807, "CGACC":588104, "CGACG":691217, "CGAGA":1730638, "CGAGT":1000042, "CGAGC":882158, "CGAGG":1598015, "CGTAA":892181, "CGTAT":838326, "CGTAC":667575, "CGTAG":1071060, "CGTTA":1066067, "CGTTT":1717617, "CGTTC":880029, "CGTTG":1438100, "CGTCA":1361103, "CGTCT":5204782, "CGTCC":914768, "CGTCG":599813, "CGTGA":1246977, "CGTGT":1713149, "CGTGC":780523, "CGTGG":1460071, "CGCAA":735215, "CGCAT":644321, "CGCAC":716525, "CGCAG":1180626, "CGCTA":536269, "CGCTT":944208, "CGCTC":817893, "CGCTG":1525039, "CGCCA":2436640, "CGCCT":705027, "CGCCC":499419, "CGCCG":639322, "CGCGA":347614, "CGCGT":390639, "CGCGC":283887, "CGCGG":639322, "CGGAA":6962490, "CGGAT":1013797, "CGGAC":856220, "CGGAG":1803187, "CGGTA":699398, "CGGTT":1524985, "CGGTC":829267, "CGGTG":1604670, "CGGCA":1031191, "CGGCT":1072369, "CGGCC":941216, "CGGCG":851790, "CGGGA":1197825, "CGGGT":1279181, "CGGGC":846093, "CGGGG":1815170, "GAAAA":10361542, 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"GC":[0.669803,0.474786,0.425913,0.46194,0.431356,0.390978,0.40706,0.450279,0.466916,0.386774,0.522134,0.488968,0.437653,0.426136,0.42634,0.423442,0.425064,0.418624,0.422489,0.420238,0.422998,0.422908,0.423416,0.416506,0.422055,0.417087,0.417272,0.418418,0.419306,0.414491,0.418756,0.415283,0.415003,0.417388,0.41803,0.416327,0.419344,0.4162,0.416996,0.418039,0.418889,0.414047,0.419342,0.418565,0.418744,0.418593,0.418188,0.41378,0.419817,0.414313,0.41558,0.4163,0.417398,0.415654,0.419587,0.417538,0.416475,0.417571,0.417979,0.414852,0.42029,0.416103,0.416653,0.41934,0.42018,0.417635,0.421534,0.418716,0.419815,0.420882,0.421283,0.41863,0.421921,0.419129,0.419386,0.421466,0.422268,0.420718,0.424206,0.422204,0.423764,0.42431,0.426544,0.424694,0.428906,0.426794,0.427978,0.429706,0.430956,0.428822,0.433975,0.432289,0.434329,0.434163,0.435842,0.433504,0.4372,0.434937,0.435851,0.438056,0.4398] }, "kmer_count": { "AAAAA":18349242, "AAAAT":7576833, "AAAAC":6453659, "AAAAG":5730254, 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"ACGTA":1161630, "ACGTT":1590660, "ACGTC":1377782, "ACGTG":1267885, "ACGCA":1422894, "ACGCT":1458518, "ACGCC":1349208, "ACGCG":394343, "ACGGA":1142567, "ACGGT":1009075, "ACGGC":1181280, "ACGGG":715584, "AGAAA":5848473, "AGAAT":2994521, "AGAAC":2851407, "AGAAG":3555739, "AGATA":2910291, "AGATT":3297884, "AGATC":9637613, "AGATG":3613268, "AGACA":4402102, "AGACT":2829554, "AGACC":2228295, "AGACG":1477885, "AGAGA":4764584, "AGAGT":4806758, "AGAGC":7655973, "AGAGG":2645679, "AGTAA":3012620, "AGTAT":2988479, "AGTAC":2236450, "AGTAG":1873040, "AGTTA":2744935, "AGTTT":5271786, "AGTTC":2527121, "AGTTG":2480623, "AGTCA":3455667, "AGTCT":2966784, "AGTCC":2362426, "AGTCG":892619, "AGTGA":3005071, "AGTGT":5656101, "AGTGC":2217138, "AGTGG":2004399, "AGCAA":3396241, "AGCAT":3171349, "AGCAC":2993552, "AGCAG":4873140, "AGCTA":2175145, "AGCTT":3319916, "AGCTC":3315209, "AGCTG":4095690, "AGCCA":3172453, "AGCCT":2693783, "AGCCC":2201236, "AGCCG":1086179, "AGCGA":995650, "AGCGT":5938187, "AGCGC":1101156, "AGCGG":870682, "AGGAA":3318003, "AGGAT":2196274, "AGGAC":2267057, "AGGAG":3047933, "AGGTA":1441044, "AGGTT":2280661, "AGGTC":1747420, "AGGTG":2127179, "AGGCA":2025532, "AGGCT":2162216, "AGGCC":1764974, "AGGCG":758011, "AGGGA":4732559, "AGGGT":1234796, "AGGGC":1298446, "AGGGG":1171834, "TAAAA":7533249, "TAAAT":5962720, "TAAAC":4426089, "TAAAG":4135700, "TAATA":4713205, "TAATT":4919499, "TAATC":3096182, "TAATG":3833624, "TAACA":4704508, "TAACT":3286923, "TAACC":2397627, "TAACG":1100288, "TAAGA":2717868, "TAAGT":2615398, "TAAGC":1638921, "TAAGG":1376286, "TATAA":4246167, "TATAT":6000699, "TATAC":2789905, "TATAG":2103406, "TATTA":5091043, "TATTT":9626941, "TATTC":3603713, "TATTG":3816151, "TATCA":5329320, "TATCT":4239666, "TATCC":2577475, "TATCG":987193, "TATGA":3276530, "TATGT":4079316, "TATGC":2039677, "TATGG":1815591, "TACAA":4467458, "TACAT":5061315, "TACAC":4053248, "TACAG":3944674, "TACTA":2953896, "TACTT":3891319, "TACTC":2470530, "TACTG":3521550, "TACCA":2601776, "TACCT":2581167, "TACCC":1904428, "TACCG":653740, "TACGA":932978, "TACGT":1201222, "TACGC":671550, "TACGG":709975, "TAGAA":2723785, "TAGAT":4111530, "TAGAC":1701251, "TAGAG":2053919, "TAGTA":1932964, "TAGTT":2841016, "TAGTC":1610629, "TAGTG":1898684, "TAGCA":2261444, "TAGCT":2188905, "TAGCC":1271264, "TAGCG":536082, "TAGGA":1308531, "TAGGT":1072646, "TAGGC":861113, "TAGGG":3757488, "TTAAA":8063836, "TTAAT":5879974, "TTAAC":3949665, "TTAAG":3118531, "TTATA":4422022, "TTATT":9306636, "TTATC":3957265, "TTATG":3771297, "TTACA":5368181, "TTACT":3946727, "TTACC":2384211, "TTACG":874318, "TTAGA":3024515, "TTAGT":2774140, "TTAGC":2140572, "TTAGG":1269631, "TTTAA":8756323, "TTTAT":9466938, "TTTAC":4930342, "TTTAG":3857144, "TTTTA":10075799, "TTTTT":22039240, "TTTTC":9091632, "TTTTG":8079490, "TTTCA":7574566, "TTTCT":9639659, "TTTCC":5680760, "TTTCG":1109502, "TTTGA":6013263, "TTTGT":9034341, "TTTGC":4606852, "TTTGG":3722258, "TTCAA":5382176, "TTCAT":6734362, "TTCAC":4898089, "TTCAG":5037244, "TTCTA":3891308, "TTCTT":8506313, "TTCTC":6324732, "TTCTG":5203727, "TTCCA":4702402, "TTCCT":6133442, "TTCCC":3701027, "TTCCG":807866, "TTCGA":946480, "TTCGT":1264937, "TTCGC":793121, "TTCGG":788871, "TTGAA":4658148, "TTGAT":4400740, "TTGAC":3147343, "TTGAG":2973453, "TTGTA":4475632, "TTGTT":7925806, "TTGTC":4129494, "TTGTG":4808492, "TTGCA":4232826, "TTGCT":3881883, "TTGCC":2703479, "TTGCG":767850, "TTGGA":2651921, "TTGGT":2930862, "TTGGC":2128496, "TTGGG":1700945, "TCAAA":5880673, "TCAAT":4019969, "TCAAC":4112566, "TCAAG":3249024, "TCATA":3449343, "TCATT":6504677, "TCATC":5625082, "TCATG":4001323, "TCACA":5955366, "TCACT":5219542, "TCACC":5244272, "TCACG":1262320, "TCAGA":5041535, "TCAGT":4627248, "TCAGC":4037719, "TCAGG":2500078, "TCTAA":3078011, "TCTAT":4071573, "TCTAC":3096985, "TCTAG":1737992, "TCTTA":3860849, "TCTTT":8760943, "TCTTC":6684890, "TCTTG":3374421, "TCTCA":5140505, "TCTCT":10125801, "TCTCC":6024673, "TCTCG":1800211, "TCTGA":4563208, "TCTGT":7215536, "TCTGC":4448663, "TCTGG":2818329, 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"TGTCG":1328388, "TGTGA":4387902, "TGTGT":9356674, "TGTGC":3445531, "TGTGG":3208679, "TGCAA":3851831, "TGCAT":4531406, "TGCAC":3677276, "TGCAG":4690667, "TGCTA":2562922, "TGCTT":4464473, "TGCTC":3588579, "TGCTG":5005074, "TGCCA":3557331, "TGCCT":3170462, "TGCCC":2124649, "TGCCG":1024025, "TGCGA":792448, "TGCGT":1190834, "TGCGC":835733, "TGCGG":617955, "TGGAA":2986241, "TGGAT":2627466, "TGGAC":2654990, "TGGAG":3089882, "TGGTA":1856816, "TGGTT":3245894, "TGGTC":2298268, "TGGTG":3755608, "TGGCA":2598974, "TGGCT":2885595, "TGGCC":2024277, "TGGCG":792755, "TGGGA":1943727, "TGGGT":1759622, "TGGGC":1507730, "TGGGG":1613787, "CAAAA":6812557, "CAAAT":4965657, "CAAAC":5723683, "CAAAG":4400318, "CAATA":3566992, "CAATT":3386680, "CAATC":2775417, "CAATG":3313455, "CAACA":6772805, "CAACT":3774042, "CAACC":3496086, "CAACG":1565613, "CAAGA":3796299, "CAAGT":2858169, "CAAGC":2370325, "CAAGG":2155041, "CATAA":3517684, "CATAT":3812570, "CATAC":2993522, "CATAG":1930246, "CATTA":4777035, "CATTT":8106404, 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"CTTAA":3670337, "CTTAT":3399159, "CTTAC":2410362, "CTTAG":1574587, "CTTTA":5343304, "CTTTT":9342842, "CTTTC":5436300, "CTTTG":5163823, "CTTCA":5861735, "CTTCT":7193743, "CTTCC":4646164, "CTTCG":1224458, "CTTGA":2832179, "CTTGT":3881421, "CTTGC":2354330, "CTTGG":1840515, "CTCAA":4085165, "CTCAT":4555781, "CTCAC":4850982, "CTCAG":4351957, "CTCTA":3193443, "CTCTT":6319088, "CTCTC":9069655, "CTCTG":6255960, "CTCCA":5613320, "CTCCT":7537406, "CTCCC":4374459, "CTCCG":1691011, "CTCGA":954710, "CTCGT":1404565, "CTCGC":1581690, "CTCGG":1424609, "CTGAA":4878293, "CTGAT":4086558, "CTGAC":3521544, "CTGAG":3217921, "CTGTA":4376026, "CTGTT":5829331, "CTGTC":5339556, "CTGTG":4708119, "CTGCA":5252961, "CTGCT":5667430, "CTGCC":3380287, "CTGCG":1190826, "CTGGA":3226145, "CTGGT":2632942, "CTGGC":2307017, "CTGGG":1697218, "CCAAA":4731555, "CCAAT":2558724, "CCAAC":3824706, "CCAAG":2483189, "CCATA":2361974, "CCATT":4034946, "CCATC":4534634, "CCATG":2967572, "CCACA":4523758, "CCACT":3677504, "CCACC":4304201, "CCACG":1428965, "CCAGA":5233920, "CCAGT":3210800, "CCAGC":3406014, "CCAGG":2265989, "CCTAA":2414545, "CCTAT":1747191, "CCTAC":2436410, "CCTAG":957477, "CCTTA":2609671, "CCTTT":5460535, "CCTTC":4775150, "CCTTG":2577153, "CCTCA":5128069, "CCTCT":6986141, "CCTCC":6769644, "CCTCG":1563971, "CCTGA":3497567, "CCTGT":3926446, "CCTGC":3431156, "CCTGG":2369871, "CCCAA":3127758, "CCCAT":2709951, "CCCAC":3262160, "CCCAG":3418512, "CCCTA":2134252, "CCCTT":3559292, "CCCTC":5025595, "CCCTG":2887522, "CCCCA":3774079, "CCCCT":3876862, "CCCCC":5572709, "CCCCG":1616403, "CCCGA":1044890, "CCCGT":1122134, "CCCGC":1252947, "CCCGG":1071443, "CCGAA":795307, "CCGAT":845632, "CCGAC":1276388, "CCGAG":1171185, "CCGTA":866942, "CCGTT":1246327, "CCGTC":1790522, "CCGTG":1195096, "CCGCA":1169832, "CCGCT":1396331, "CCGCC":1620842, "CCGCG":592941, "CCGGA":906486, "CCGGT":1883592, "CCGGC":1194189, "CCGGG":859238, "CGAAA":1079623, "CGAAT":613320, "CGAAC":667728, "CGAAG":721009, "CGATA":835841, "CGATT":856356, "CGATC":745407, "CGATG":1122767, "CGACA":1513913, "CGACT":1168291, "CGACC":1344578, "CGACG":695877, "CGAGA":1360973, "CGAGT":914310, "CGAGC":1053510, "CGAGG":947645, "CGTAA":903752, "CGTAT":1000708, "CGTAC":919978, "CGTAG":750234, "CGTTA":1166195, "CGTTT":1996625, "CGTTC":1195045, "CGTTG":1101388, "CGTCA":1692002, "CGTCT":1975455, "CGTCC":1478137, "CGTCG":4982405, "CGTGA":963142, "CGTGT":5159410, "CGTGC":878229, "CGTGG":1204381, "CGCAA":931431, "CGCAT":995249, "CGCAC":1243749, "CGCAG":1342707, "CGCTA":772903, "CGCTT":1242522, "CGCTC":1565904, "CGCTG":1731691, "CGCCA":1505255, "CGCCT":1322311, "CGCCC":1623547, "CGCCG":1090108, "CGCGA":302976, "CGCGT":417947, "CGCGC":436553, "CGCGG":597026, "CGGAA":6562747, "CGGAT":790928, "CGGAC":978767, "CGGAG":1265556, "CGGTA":651466, "CGGTT":917389, "CGGTC":807170, "CGGTG":2432721, "CGGCA":1206188, "CGGCT":1254765, "CGGCC":1205576, "CGGCG":753440, "CGGGA":751827, "CGGGT":613737, "CGGGC":668962, "CGGGG":1104589, "GAAAA":5679763, "GAAAT":3966756, "GAAAC":3474621, "GAAAG":5407587, "GAATA":2785514, "GAATT":2633833, "GAATC":1886079, "GAATG":2628856, "GAACA":3536467, "GAACT":2172563, "GAACC":2070474, "GAACG":969976, "GAAGA":8803407, "GAAGT":2554766, "GAAGC":2207267, "GAAGG":1944120, "GATAA":2672157, "GATAT":2954802, "GATAC":1679327, "GATAG":1212245, "GATTA":2474149, "GATTT":4235542, "GATTC":1997680, "GATTG":2089563, "GATCA":2991335, "GATCT":2632013, "GATCC":1779270, "GATCG":7299629, "GATGA":3526321, "GATGT":3346619, "GATGC":2199944, "GATGG":1938470, "GACAA":3476006, "GACAT":3579041, "GACAC":3107686, "GACAG":3307087, "GACTA":1697359, "GACTT":2890771, "GACTC":2385368, "GACTG":2684168, "GACCA":2822591, "GACCT":2282108, "GACCC":1768045, "GACCG":866970, "GACGA":1262909, "GACGT":1165878, "GACGC":1120647, "GACGG":1097026, "GAGAA":3344557, "GAGAT":3696402, "GAGAC":2407331, "GAGAG":3019703, "GAGTA":1637460, "GAGTT":2549125, "GAGTC":1827391, "GAGTG":4086510, "GAGCA":2763533, "GAGCT":2620348, "GAGCC":1870756, "GAGCG":5850005, "GAGGA":3156510, "GAGGT":1770295, "GAGGC":1793715, "GAGGG":1665447, "GTAAA":3859595, "GTAAT":2858283, "GTAAC":2117200, "GTAAG":1450585, "GTATA":2514339, "GTATT":3694725, "GTATC":3667444, "GTATG":2115251, "GTACA":3196728, "GTACT":2361224, "GTACC":1270991, "GTACG":686931, "GTAGA":2702756, "GTAGT":1902410, "GTAGC":1415735, "GTAGG":4129266, "GTTAA":3285031, "GTTAT":2994788, "GTTAC":2057019, "GTTAG":1559734, "GTTTA":4530744, "GTTTT":7933322, "GTTTC":4073520, "GTTTG":4888321, "GTTCA":3611998, "GTTCT":3236271, "GTTCC":2256617, "GTTCG":702103, "GTTGA":2792315, "GTTGT":3883045, "GTTGC":2106695, "GTTGG":1958836, "GTCAA":2955197, "GTCAT":3440429, "GTCAC":2835124, "GTCAG":2902393, "GTCTA":1732382, "GTCTT":3571602, "GTCTC":3583097, "GTCTG":3583762, "GTCCA":3009668, "GTCCT":3314779, "GTCCC":1998979, "GTCCG":894693, "GTCGA":783364, "GTCGT":5068927, "GTCGC":1155217, "GTCGG":948213, "GTGAA":3151538, "GTGAT":2730408, "GTGAC":2491399, "GTGAG":2063208, "GTGTA":8769765, "GTGTT":4786769, "GTGTC":2970436, "GTGTG":6593838, "GTGCA":2918999, "GTGCT":2659120, "GTGCC":1750477, "GTGCG":808780, "GTGGA":2518757, "GTGGT":3459368, "GTGGC":1827740, "GTGGG":1971958, "GCAAA":3535568, "GCAAT":2141433, "GCAAC":2598743, "GCAAG":1949931, "GCATA":1887889, "GCATT":3278620, "GCATC":2719957, "GCATG":2548120, "GCACA":3763128, "GCACT":2784250, "GCACC":2152466, "GCACG":856571, "GCAGA":4021479, "GCAGT":2796983, "GCAGC":4108194, "GCAGG":2342910, "GCTAA":2176949, "GCTAT":1777755, "GCTAC":1827291, "GCTAG":1040752, "GCTTA":1699621, "GCTTT":4625151, "GCTTC":3175616, "GCTTG":1860086, "GCTCA":3276005, "GCTCT":3461085, "GCTCC":2952818, "GCTCG":927725, "GCTGA":3310865, "GCTGT":4014868, "GCTGC":3850622, "GCTGG":2267775, "GCCAA":2713845, "GCCAT":2810377, "GCCAC":2400450, "GCCAG":2577530, "GCCTA":1246260, "GCCTT":2792787, "GCCTC":2939094, "GCCTG":2246290, "GCCCA":2123851, "GCCCT":2128409, "GCCCC":2324373, "GCCCG":853465, "GCCGA":918777, "GCCGT":1345978, "GCCGC":1153951, "GCCGG":937881, "GCGAA":552892, "GCGAT":617356, "GCGAC":881727, "GCGAG":824602, "GCGTA":576064, "GCGTT":1148272, "GCGTC":5492237, "GCGTG":988767, "GCGCA":778532, "GCGCT":948476, "GCGCC":997406, "GCGCG":364329, "GCGGA":692375, "GCGGT":640280, "GCGGC":960751, "GCGGG":775203, "GGAAA":6006717, "GGAAT":1847796, "GGAAC":1715153, "GGAAG":7616549, "GGATA":1490150, "GGATT":1938105, "GGATC":1539959, "GGATG":1993424, "GGACA":2819952, "GGACT":2003312, "GGACC":1495587, "GGACG":1062304, "GGAGA":2938626, "GGAGT":1697518, "GGAGC":1985407, "GGAGG":2505394, "GGTAA":1513176, "GGTAT":1444020, "GGTAC":990568, "GGTAG":949306, "GGTTA":1499889, "GGTTT":3135165, "GGTTC":1577383, "GGTTG":1749082, "GGTCA":2035370, "GGTCT":1711136, "GGTCC":1252343, "GGTCG":885636, "GGTGA":1959851, "GGTGT":3198920, "GGTGC":1523926, "GGTGG":3404252, "GGCAA":1866779, "GGCAT":1676652, "GGCAC":1516360, "GGCAG":2210168, "GGCTA":1195029, "GGCTT":2197641, "GGCTC":2007852, "GGCTG":2365608, "GGCCA":2014996, "GGCCT":1899404, "GGCCC":1394405, "GGCCG":1074301, "GGCGA":724367, "GGCGT":810989, "GGCGC":689415, "GGCGG":949178, "GGGAA":4482886, "GGGAT":1265349, "GGGAC":1316680, "GGGAG":1595494, "GGGTA":883596, "GGGTT":1424886, "GGGTC":975866, "GGGTG":1814095, "GGGCA":1280182, "GGGCT":1350720, "GGGCC":1288237, "GGGCG":798875, "GGGGA":1241244, "GGGGT":1470851, "GGGGC":1187815, "GGGGG":17759847 }, "overrepresented_sequences": { } }, "read1_after_filtering": { "total_reads": 32372680, "total_bases": 2608940427, "q20_bases": 2539896533, "q30_bases": 2421300311, "total_cycles": 86, "quality_curves": { 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"T":[35.9826,35.9901,35.9736,35.9594,35.9684,35.9584,35.9426,35.9074,35.8802,35.8764,35.7883,35.7629,35.781,35.7775,35.755,35.743,35.7493,35.7327,35.7164,35.7285,35.6929,35.684,35.6866,35.6799,35.6831,35.6666,35.6652,35.6519,35.6253,35.6315,35.6171,35.6055,35.605,35.6125,35.5815,35.5783,35.5778,35.5343,35.5542,35.5206,35.5755,35.5002,35.5429,35.5322,35.5122,35.5596,35.5013,35.469,35.512,35.4519,35.4088,35.3901,35.4323,35.4158,35.4332,35.4587,35.4551,35.4388,35.4178,35.3869,35.345,35.3525,35.347,35.3468,35.3441,35.3098,35.2754,35.3161,35.3015,35.2877,35.2637,35.2434,35.2374,35.2603,35.2091,35.2439,35.2527,35.2457,35.2225,35.201,35.1717,35.1763,35.1494,35.1244,35.1107,35.1033], "C":[36.3593,36.3696,36.3512,36.3465,36.3357,36.3279,36.307,36.3116,36.2855,36.2658,36.223,36.2134,36.2127,36.2073,36.189,36.1746,36.1639,36.1608,36.1597,36.1348,36.1303,36.1399,36.1303,36.1161,36.0874,36.0858,36.0613,36.0603,36.0495,36.0467,36.0662,36.0498,36.0192,36.0257,36.0272,36.0263,35.9835,35.9924,35.9651,35.9758,35.9279,35.9467,35.9451,35.9309,35.9168,35.9089,35.8805,35.8834,35.8513,35.8556,35.8057,35.8326,35.8316,35.8468,35.8431,35.8379,35.8076,35.803,35.7643,35.7405,35.7321,35.716,35.7088,35.7199,35.7117,35.6812,35.6705,35.6638,35.6517,35.6375,35.6116,35.6056,35.596,35.6111,35.5703,35.5821,35.5799,35.5714,35.5542,35.535,35.5101,35.5043,35.5094,35.465,35.4881,35.3497], "G":[35.9665,35.9826,35.9794,35.9851,35.9815,35.9727,35.9613,35.9623,35.9389,35.9281,35.8403,35.8266,35.8272,35.8165,35.8017,35.7927,35.7967,35.7801,35.7687,35.7641,35.7337,35.7291,35.716,35.7043,35.7043,35.7004,35.6664,35.6385,35.6368,35.6242,35.6441,35.5586,35.578,35.6175,35.562,35.5738,35.5591,35.5925,35.5213,35.5036,35.5369,35.4872,35.5103,35.5157,35.4189,35.4881,35.4713,35.4796,35.4229,35.4453,35.3583,35.4474,35.4162,35.3742,35.3638,35.3898,35.415,35.4024,35.3801,35.3307,35.3192,35.3063,35.3239,35.3023,35.2902,35.2505,35.2159,35.2531,35.2252,35.1737,35.1447,35.1143,35.138,35.1497,35.1101,35.0856,35.1343,35.1101,35.1078,35.0689,35.0328,35.0233,35.0246,34.9804,34.9915,34.8408], 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"A":[0.314526,0.315649,0.31722,0.324218,0.319972,0.316416,0.315963,0.313961,0.31569,0.317885,0.318422,0.316215,0.314011,0.313309,0.315075,0.314103,0.315771,0.313761,0.315022,0.312674,0.313165,0.313632,0.314566,0.311992,0.313035,0.311475,0.312081,0.31206,0.312312,0.312734,0.312995,0.313569,0.314229,0.314848,0.313826,0.311158,0.310211,0.309566,0.309656,0.308908,0.311248,0.309708,0.309875,0.308551,0.311074,0.311044,0.310324,0.311352,0.310828,0.310522,0.310497,0.311185,0.310989,0.312105,0.311798,0.311295,0.311231,0.311934,0.313165,0.313447,0.313501,0.310457,0.312588,0.311395,0.314761,0.313984,0.312256,0.311959,0.314317,0.313594,0.31181,0.311567,0.31364,0.312352,0.314146,0.314004,0.312998,0.311867,0.310493,0.311627,0.312028,0.311086,0.312348,0.312553,0.31288,0.31265], 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"CCTTT":2452271, "CCTTC":1513935, "CCTTG":1708929, "CCTCA":1824702, "CCTCT":2069644, "CCTCC":1799569, "CCTCG":719406, "CCTGA":1982435, "CCTGT":2245276, "CCTGC":1797326, "CCTGG":1810593, "CCCAA":1291264, "CCCAT":1161737, "CCCAC":1044832, "CCCAG":1339013, "CCCTA":631553, "CCCTT":1084730, "CCCTC":1156313, "CCCTG":1435936, "CCCCA":814766, "CCCCT":900902, "CCCCC":644811, "CCCCG":485288, "CCCGA":454694, "CCCGT":526804, "CCCGC":424054, "CCCGG":496171, "CCGAA":636708, "CCGAT":717115, "CCGAC":655845, "CCGAG":745381, "CCGTA":580653, "CCGTT":853882, "CCGTC":818393, "CCGTG":882336, "CCGCA":456145, "CCGCT":626278, "CCGCC":574248, "CCGCG":359154, "CCGGA":627604, "CCGGT":643466, "CCGGC":611846, "CCGGG":780012, "CGAAA":936618, "CGAAT":666128, "CGAAC":521274, "CGAAG":993650, "CGATA":715190, "CGATT":672784, "CGATC":688536, "CGATG":1208117, "CGACA":1079759, "CGACT":656876, "CGACC":505787, "CGACG":566499, "CGAGA":1017995, "CGAGT":789404, "CGAGC":732168, "CGAGG":1238497, "CGTAA":718851, "CGTAT":677048, 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"GGGGA":3524693, "GGGGT":2284522, "GGGGC":1748975, "GGGGG":3905335 }, "overrepresented_sequences": { } }, "read2_after_filtering": { "total_reads": 32372680, "total_bases": 2666567131, "q20_bases": 2587013027, "q30_bases": 2450458800, "total_cycles": 86, "quality_curves": { "A":[36.1592,36.1505,36.1756,36.1984,36.1284,36.1428,36.1064,36.1119,36.0909,36.0939,36.1058,36.063,36.0654,36.067,36.0385,36.0396,36.0345,36.0187,36.0056,35.9919,35.984,35.9688,35.978,35.943,35.9412,35.9176,35.9239,35.9016,35.8856,35.8742,35.8885,35.8721,35.8551,35.8481,35.848,35.8229,35.815,35.7798,35.7742,35.7319,35.7216,35.7193,35.7339,35.705,35.6779,35.6514,35.6393,35.6252,35.6133,35.5819,35.5705,35.5476,35.5439,35.4887,35.5189,35.4935,35.5093,35.4966,35.4861,35.4617,35.44,35.3882,35.3931,35.375,35.3774,35.3634,35.373,35.3516,35.3231,35.3353,35.3236,35.3468,35.3344,35.3131,35.312,35.3159,35.2782,35.2826,35.2793,35.244,35.2182,35.2248,35.239,35.1711,35.1636,34.9243], 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"CATGG":2063460, "CACAA":4246194, "CACAT":4826790, "CACAC":9537778, "CACAG":4186843, "CACTA":2532476, "CACTT":3826301, "CACTC":3394555, "CACTG":3869654, "CACCA":3963863, "CACCT":3218646, "CACCC":2477606, "CACCG":2394322, "CACGA":843238, "CACGT":1147515, "CACGC":1262947, "CACGG":888237, "CAGAA":3497383, "CAGAT":3921448, "CAGAC":3195313, "CAGAG":3410920, "CAGTA":2879707, "CAGTT":3480538, "CAGTC":2942313, "CAGTG":3135827, "CAGCA":4631068, "CAGCT":3822291, "CAGCC":2936108, "CAGCG":1360015, "CAGGA":2728862, "CAGGT":2115924, "CAGGC":1786807, "CAGGG":1459141, "CTAAA":3091544, "CTAAT":2534318, "CTAAC":1950850, "CTAAG":1305627, "CTATA":2089968, "CTATT":2656576, "CTATC":2123677, "CTATG":1717074, "CTACA":3220242, "CTACT":2827668, "CTACC":1875159, "CTACG":911094, "CTAGA":1400397, "CTAGT":1164233, "CTAGC":948539, "CTAGG":577866, "CTTAA":2980850, "CTTAT":2829021, "CTTAC":1957062, "CTTAG":1222979, "CTTTA":4333036, "CTTTT":7644738, "CTTTC":4413917, "CTTTG":4162087, "CTTCA":4590777, "CTTCT":5884240, "CTTCC":3728617, "CTTCG":975117, "CTTGA":2225841, "CTTGT":3115703, "CTTGC":1898587, "CTTGG":1448426, "CTCAA":3206147, "CTCAT":3660600, "CTCAC":3860940, "CTCAG":3325195, "CTCTA":2526907, "CTCTT":5167138, "CTCTC":7368477, "CTCTG":5030185, "CTCCA":4314009, "CTCCT":6107332, "CTCCC":3504052, "CTCCG":1299712, "CTCGA":731767, "CTCGT":1100424, "CTCGC":1250795, "CTCGG":1130068, "CTGAA":3868602, "CTGAT":3325254, "CTGAC":2796850, "CTGAG":2469576, "CTGTA":3526833, "CTGTT":4758170, "CTGTC":4291375, "CTGTG":3783468, "CTGCA":4148518, "CTGCT":4551338, "CTGCC":2710244, "CTGCG":950878, "CTGGA":2537727, "CTGGT":2075109, "CTGGC":1827013, "CTGGG":1337638, "CCAAA":3804810, "CCAAT":2097360, "CCAAC":2951733, "CCAAG":1913120, "CCATA":1902437, "CCATT":3341741, "CCATC":3642827, "CCATG":2410783, "CCACA":3423333, "CCACT":2961477, "CCACC":3308454, "CCACG":1130016, "CCAGA":3048774, "CCAGT":2577527, "CCAGC":2712896, "CCAGG":1821099, "CCTAA":1920345, "CCTAT":1451311, "CCTAC":1962347, "CCTAG":699907, "CCTTA":2105435, "CCTTT":4505291, "CCTTC":3917586, "CCTTG":2092280, "CCTCA":4104021, "CCTCT":5689967, "CCTCC":5474936, "CCTCG":1249816, "CCTGA":2782994, "CCTGT":3136950, "CCTGC":2753067, "CCTGG":1886049, "CCCAA":2339230, "CCCAT":2172595, "CCCAC":2392830, "CCCAG":2320058, "CCCTA":1773237, "CCCTT":2945663, "CCCTC":4075501, "CCCTG":2332055, "CCCCA":2643413, "CCCCT":3196074, "CCCCC":3398762, "CCCCG":1140642, "CCCGA":761487, "CCCGT":879491, "CCCGC":903862, "CCCGG":767493, "CCGAA":626122, "CCGAT":664939, "CCGAC":986123, "CCGAG":825138, "CCGTA":669340, "CCGTT":987840, "CCGTC":1428190, "CCGTG":911010, "CCGCA":859432, "CCGCT":1102619, "CCGCC":1202075, "CCGCG":417704, "CCGGA":682405, "CCGGT":1637578, "CCGGC":868828, "CCGGG":587473, "CGAAA":871888, "CGAAT":493194, "CGAAC":517768, "CGAAG":532360, "CGATA":674297, "CGATT":688090, "CGATC":582233, "CGATG":897476, "CGACA":1143860, "CGACT":918303, "CGACC":1034189, "CGACG":529768, "CGAGA":867858, "CGAGT":711116, "CGAGC":820884, "CGAGG":738187, "CGTAA":737335, "CGTAT":798340, "CGTAC":751849, "CGTAG":596400, "CGTTA":923356, "CGTTT":1602484, "CGTTC":967835, "CGTTG":873710, "CGTCA":1337964, "CGTCT":1570464, "CGTCC":1177036, "CGTCG":1691421, "CGTGA":761193, "CGTGT":2317680, "CGTGC":699445, "CGTGG":861258, "CGCAA":728236, "CGCAT":795069, "CGCAC":981468, "CGCAG":962163, "CGCTA":605847, "CGCTT":973771, "CGCTC":1247771, "CGCTG":1378079, "CGCCA":1123855, "CGCCT":1048117, "CGCCC":1157316, "CGCCG":795159, "CGCGA":234288, "CGCGT":317709, "CGCGC":294541, "CGCGG":367971, "CGGAA":1741623, "CGGAT":614796, "CGGAC":751977, "CGGAG":949150, "CGGTA":512196, "CGGTT":726026, "CGGTC":627956, "CGGTG":2076321, "CGGCA":914364, "CGGCT":949311, "CGGCC":870926, "CGGCG":537594, "CGGGA":575026, "CGGGT":438265, "CGGGC":468692, "CGGGG":601095, "GAAAA":4736181, "GAAAT":3343771, "GAAAC":2890832, "GAAAG":3480873, "GAATA":2328160, "GAATT":2204872, "GAATC":1554010, "GAATG":2194479, "GAACA":2854392, "GAACT":1785999, "GAACC":1691306, "GAACG":772934, "GAAGA":3851376, "GAAGT":2094676, "GAAGC":1802590, "GAAGG":1554415, "GATAA":2241551, "GATAT":2475367, "GATAC":1389376, "GATAG":963933, "GATTA":2066606, "GATTT":3552476, "GATTC":1652205, "GATTG":1730106, "GATCA":2445254, "GATCT":2173142, "GATCC":1438228, "GATCG":1851421, "GATGA":2927790, "GATGT":2791901, "GATGC":1800845, "GATGG":1592366, "GACAA":2836072, "GACAT":2934898, "GACAC":2505600, "GACAG":2571920, "GACTA":1379823, "GACTT":2349267, "GACTC":1921500, "GACTG":2170998, "GACCA":2267642, "GACCT":1842240, "GACCC":1413658, "GACCG":690958, "GACGA":995399, "GACGT":941510, "GACGC":897911, "GACGG":866055, "GAGAA":2782146, "GAGAT":2269089, "GAGAC":1961802, "GAGAG":2391718, "GAGTA":1351014, "GAGTT":2112167, "GAGTC":1481285, "GAGTG":2754236, "GAGCA":2234675, "GAGCT":2118520, "GAGCC":1516933, "GAGCG":1924993, "GAGGA":2588052, "GAGGT":1430016, "GAGGC":1445877, "GAGGG":1240460, "GTAAA":3216882, "GTAAT":2413466, "GTAAC":1748532, "GTAAG":1166867, "GTATA":2080037, "GTATT":3137649, "GTATC":2781694, "GTATG":1748489, "GTACA":2640658, "GTACT":1959661, "GTACC":1038579, "GTACG":563675, "GTAGA":2190975, "GTAGT":1572911, "GTAGC":1162980, "GTAGG":1894625, "GTTAA":2673111, "GTTAT":2491166, "GTTAC":1678529, "GTTAG":1237989, "GTTTA":3672101, "GTTTT":6414878, "GTTTC":3308805, "GTTTG":3880550, "GTTCA":2865191, "GTTCT":2635999, "GTTCC":1843316, "GTTCG":548776, "GTTGA":2233131, "GTTGT":3102217, "GTTGC":1693190, "GTTGG":1482650, "GTCAA":2363719, "GTCAT":2816985, "GTCAC":2274588, "GTCAG":2286202, "GTCTA":1385316, "GTCTT":2927002, "GTCTC":2895479, "GTCTG":2871961, "GTCCA":2354207, "GTCCT":2677886, "GTCCC":1606161, "GTCCG":711485, "GTCGA":593376, "GTCGT":1949904, "GTCGC":883739, "GTCGG":678829, "GTGAA":2561483, "GTGAT":2237254, "GTGAC":2017810, "GTGAG":1610671, "GTGTA":5147241, "GTGTT":3862568, "GTGTC":2387819, "GTGTG":5064186, "GTGCA":2368360, "GTGCT":2154591, "GTGCC":1420886, "GTGCG":619969, "GTGGA":1958619, "GTGGT":2785097, "GTGGC":1441284, "GTGGG":1058910, "GCAAA":2826745, "GCAAT":1733471, "GCAAC":2081715, "GCAAG":1517836, "GCATA":1545205, "GCATT":2688967, "GCATC":2211266, "GCATG":2074282, "GCACA":2987329, "GCACT":2248130, "GCACC":1713800, "GCACG":643969, "GCAGA":2843551, "GCAGT":2250317, "GCAGC":3241251, "GCAGG":1881289, "GCTAA":1762583, "GCTAT":1443923, "GCTAC":1474270, "GCTAG":784594, "GCTTA":1369140, "GCTTT":3754247, "GCTTC":2523915, "GCTTG":1492342, "GCTCA":2598913, "GCTCT":2779039, "GCTCC":2321292, "GCTCG":728868, "GCTGA":2625107, "GCTGT":3216446, "GCTGC":3099863, "GCTGG":1801579, "GCCAA":2132538, "GCCAT":2216335, "GCCAC":1882813, "GCCAG":1854609, "GCCTA":931878, "GCCTT":2233695, "GCCTC":2353916, "GCCTG":1784280, "GCCCA":1615020, "GCCCT":1689348, "GCCCC":1704879, "GCCCG":642658, "GCCGA":691399, "GCCGT":999763, "GCCGC":860563, "GCCGG":675507, "GCGAA":412226, "GCGAT":498398, "GCGAC":688681, "GCGAG":621187, "GCGTA":459631, "GCGTT":906942, "GCGTC":1962729, "GCGTG":759056, "GCGCA":602479, "GCGCT":745112, "GCGCC":736955, "GCGCG":245002, "GCGGA":526931, "GCGGT":489972, "GCGGC":656206, "GCGGG":422341, "GGAAA":3835743, "GGAAT":1502202, "GGAAC":1371020, "GGAAG":2719561, "GGATA":1202952, "GGATT":1586074, "GGATC":1221872, "GGATG":1609908, "GGACA":2200253, "GGACT":1596434, "GGACC":1187212, "GGACG":819975, "GGAGA":2234368, "GGAGT":1356645, "GGAGC":1579924, "GGAGG":1895354, "GGTAA":1214002, "GGTAT":1174938, "GGTAC":806527, "GGTAG":718383, "GGTTA":1207140, "GGTTT":2488544, "GGTTC":1269861, "GGTTG":1328129, "GGTCA":1623653, "GGTCT":1374249, "GGTCC":1001148, "GGTCG":667470, "GGTGA":1563469, "GGTGT":2531895, "GGTGC":1242760, "GGTGG":2345597, "GGCAA":1456540, "GGCAT":1353729, "GGCAC":1167315, "GGCAG":1665915, "GGCTA":954315, "GGCTT":1769124, "GGCTC":1570303, "GGCTG":1878244, "GGCCA":1573071, "GGCCT":1453191, "GGCCC":1053379, "GGCCG":760130, "GGCGA":537084, "GGCGT":630174, "GGCGC":495231, "GGCGG":570643, "GGGAA":2436902, "GGGAT":1014211, "GGGAC":1022079, "GGGAG":1193719, "GGGTA":655738, "GGGTT":1057491, "GGGTC":762327, "GGGTG":991712, "GGGCA":989559, "GGGCT":1092509, "GGGCC":913869, "GGGCG":445129, "GGGGA":897755, "GGGGT":702075, "GGGGC":743329, "GGGGG":992103 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_213511_sample_1703755_S134_L002_R1_001.fastq.gz --in2 lib_213511_sample_1703755_S134_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213511_sample_1703755_S134_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213511_sample_1703755_S134_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213511_sample_1703755_S134_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213511_sample_1703755_S134_L002_R2_001.fastp-trim.fq.gz " }