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"CCAGC":1594046, "CCAGG":1882302, "CCTAA":1072782, "CCTAT":976613, "CCTAC":844442, "CCTAG":1066110, "CCTTA":817412, "CCTTT":1555980, "CCTTC":1106616, "CCTTG":1486434, "CCTCA":2544187, "CCTCT":1638443, "CCTCC":1141564, "CCTCG":440657, "CCTGA":1512920, "CCTGT":2297409, "CCTGC":1180403, "CCTGG":1702266, "CCCAA":976734, "CCCAT":1028100, "CCCAC":789876, "CCCAG":1284125, "CCCTA":590209, "CCCTT":792052, "CCCTC":832827, "CCCTG":1170446, "CCCCA":799922, "CCCCT":642825, "CCCCC":533898, "CCCCG":316129, "CCCGA":336393, "CCCGT":327890, "CCCGC":229034, "CCCGG":319370, "CCGAA":545317, "CCGAT":540725, "CCGAC":358750, "CCGAG":539961, "CCGTA":463156, "CCGTT":612448, "CCGTC":688895, "CCGTG":702036, "CCGCA":327153, "CCGCT":410096, "CCGCC":319008, "CCGCG":145775, "CCGGA":395949, "CCGGT":549428, "CCGGC":426985, "CCGGG":537650, "CGAAA":710624, "CGAAT":563345, "CGAAC":398282, "CGAAG":649010, "CGATA":736411, "CGATT":717874, "CGATC":556371, "CGATG":984870, "CGACA":769402, "CGACT":531616, "CGACC":308687, "CGACG":216024, "CGAGA":1622151, "CGAGT":603498, "CGAGC":572797, "CGAGG":869198, "CGTAA":651116, "CGTAT":968035, "CGTAC":435485, "CGTAG":913163, "CGTTA":655078, "CGTTT":1102803, "CGTTC":594755, "CGTTG":1017119, "CGTCA":782402, "CGTCT":4332826, "CGTCC":417153, "CGTCG":477740, "CGTGA":812331, "CGTGT":1450358, "CGTGC":462454, "CGTGG":1078168, "CGCAA":462551, "CGCAT":417774, "CGCAC":446566, "CGCAG":573309, "CGCTA":371909, "CGCTT":352984, "CGCTC":411674, "CGCTG":721833, "CGCCA":424327, "CGCCT":440712, "CGCCC":224364, "CGCCG":247050, "CGCGA":184476, "CGCGT":324575, "CGCGC":180491, "CGCGG":271874, "CGGAA":5905164, "CGGAT":668935, "CGGAC":473159, "CGGAG":1011566, "CGGTA":714827, "CGGTT":777773, "CGGTC":486686, "CGGTG":987184, "CGGCA":608605, "CGGCT":543030, "CGGCC":388880, "CGGCG":417162, "CGGGA":746068, "CGGGT":617475, "CGGGC":394407, "CGGGG":1098162, "GAAAA":5018272, "GAAAT":3675414, "GAAAC":2544704, "GAAAG":5822811, "GAATA":3615381, "GAATT":2060768, "GAATC":1418138, "GAATG":3640245, 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"GGGTT":4528581, "GGGTC":1797925, "GGGTG":3822113, "GGGCA":2021232, "GGGCT":1899152, "GGGCC":999149, "GGGCG":890566, "GGGGA":4659061, "GGGGT":5298707, "GGGGC":1816418, "GGGGG":11350813 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 26984646, "total_bases": 2725449246, "q20_bases": 2587126067, "q30_bases": 2419030871, "total_cycles": 101, "quality_curves": { 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"T":[35.2228,35.5446,35.3159,35.4177,35.5271,35.4459,35.4476,35.4485,35.4589,35.4864,35.3924,35.4463,35.4871,35.4723,35.4444,35.4397,35.4069,35.4281,35.412,35.3462,35.3564,35.3041,35.3099,35.2588,35.2345,35.2455,35.2433,35.2023,35.191,35.131,35.1333,35.1017,35.0576,35.0745,35.0787,35.0494,35.0201,35.048,34.9964,34.9624,34.9515,34.9874,34.9654,34.8996,34.8955,34.8509,34.7817,34.7684,34.6767,34.6447,34.7136,34.6749,34.6674,34.6867,34.6593,34.6155,34.6033,34.5809,34.5632,34.5636,34.5301,34.5619,34.5746,34.5438,34.5087,34.4777,34.4354,34.448,34.3788,34.3621,34.3159,34.3019,34.2424,34.1752,34.1638,34.1317,34.0806,33.9549,33.9531,34.0404,34.014,33.9259,33.8198,33.8195,33.872,33.8415,33.8672,33.7921,33.7707,33.7203,33.7106,33.6992,33.6841,33.6879,33.6422,33.5814,33.5587,33.4957,33.509,33.4703,33.0242], 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"CCAGT":2764285, "CCAGC":2536740, "CCAGG":1884098, "CCTAA":2460558, "CCTAT":2311023, "CCTAC":5179319, "CCTAG":1629197, "CCTTA":2354990, "CCTTT":3483142, "CCTTC":3800103, "CCTTG":1794199, "CCTCA":4389630, "CCTCT":7997619, "CCTCC":5698748, "CCTCG":842880, "CCTGA":2455621, "CCTGT":3862073, "CCTGC":2537165, "CCTGG":2017655, "CCCAA":3656871, "CCCAT":2850974, "CCCAC":5203532, "CCCAG":3218225, "CCCTA":3997259, "CCCTT":2890120, "CCCTC":5593635, "CCCTG":3071106, "CCCCA":4594727, "CCCCT":4510650, "CCCCC":4356583, "CCCCG":1107668, "CCCGA":605316, "CCCGT":804199, "CCCGC":830069, "CCCGG":605728, "CCGAA":477712, "CCGAT":651061, "CCGAC":709494, "CCGAG":675030, "CCGTA":742643, "CCGTT":785765, "CCGTC":943217, "CCGTG":646953, "CCGCA":730807, "CCGCT":924807, "CCGCC":914551, "CCGCG":307668, "CCGGA":503346, "CCGGT":539116, "CCGGC":573254, "CCGGG":536639, "CGAAA":611707, "CGAAT":462729, "CGAAC":503570, "CGAAG":414814, "CGATA":583913, "CGATT":612942, "CGATC":579679, "CGATG":617584, "CGACA":1207701, "CGACT":654908, "CGACC":835298, "CGACG":358946, "CGAGA":927173, "CGAGT":442272, "CGAGC":460951, "CGAGG":507612, "CGTAA":590122, "CGTAT":649886, "CGTAC":591373, "CGTAG":561208, "CGTTA":808103, "CGTTT":1107994, "CGTTC":834515, "CGTTG":753578, "CGTCA":993318, "CGTCT":1196949, "CGTCC":781520, "CGTCG":4019269, "CGTGA":544336, "CGTGT":4986927, "CGTGC":546922, "CGTGG":715435, "CGCAA":717512, "CGCAT":566773, "CGCAC":889662, "CGCAG":724274, "CGCTA":793960, "CGCTT":654916, "CGCTC":1644018, "CGCTG":1053116, "CGCCA":891535, "CGCCT":692957, "CGCCC":964011, "CGCCG":540528, "CGCGA":183952, "CGCGT":204151, "CGCGC":409237, "CGCGG":332241, "CGGAA":5520798, "CGGAT":469322, "CGGAC":528753, "CGGAG":620832, "CGGTA":524056, "CGGTT":514563, "CGGTC":616716, "CGGTG":1033131, "CGGCA":648868, "CGGCT":624345, "CGGCC":665624, "CGGCG":371295, "CGGGA":459336, "CGGGT":418749, "CGGGC":422345, "CGGGG":802389, "GAAAA":2643479, "GAAAT":2516557, "GAAAC":2090327, "GAAAG":4037976, "GAATA":1822406, "GAATT":1699396, 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"GTAAT":2044207, "GTAAC":1815578, "GTAAG":963602, "GTATA":2364092, "GTATT":2638703, "GTATC":1774793, "GTATG":1635133, "GTACA":2747820, "GTACT":2107153, "GTACC":1654349, "GTACG":446711, "GTAGA":2225514, "GTAGT":1459683, "GTAGC":2908382, "GTAGG":3790791, "GTTAA":1957474, "GTTAT":2179699, "GTTAC":1976310, "GTTAG":1298058, "GTTTA":2605113, "GTTTT":4069738, "GTTTC":2508654, "GTTTG":2601300, "GTTCA":2441168, "GTTCT":2900490, "GTTCC":2088516, "GTTCG":430008, "GTTGA":2014122, "GTTGT":2652065, "GTTGC":1783303, "GTTGG":1342013, "GTCAA":2173533, "GTCAT":2679096, "GTCAC":2239046, "GTCAG":2058315, "GTCTA":2210297, "GTCTT":2433198, "GTCTC":4536096, "GTCTG":3194925, "GTCCA":2233546, "GTCCT":2555179, "GTCCC":1907438, "GTCCG":487822, "GTCGA":467739, "GTCGT":5199498, "GTCGC":742621, "GTCGG":541453, "GTGAA":1861458, "GTGAT":1632051, "GTGAC":1544016, "GTGAG":1272933, "GTGTA":7806077, "GTGTT":3216784, "GTGTC":2285824, "GTGTG":5417843, "GTGCA":1627925, "GTGCT":1597430, "GTGCC":1194777, "GTGCG":478149, "GTGGA":1740254, "GTGGT":1959552, "GTGGC":1165622, "GTGGG":1665076, "GCAAA":1836181, "GCAAT":1488298, "GCAAC":2112368, "GCAAG":1241480, "GCATA":1370957, "GCATT":2043210, "GCATC":1550778, "GCATG":1426821, "GCACA":2600207, "GCACT":1734372, "GCACC":1611740, "GCACG":509501, "GCAGA":2141004, "GCAGT":1714850, "GCAGC":2245419, "GCAGG":1336572, "GCTAA":1485939, "GCTAT":1710704, "GCTAC":2475658, "GCTAG":1175977, "GCTTA":950433, "GCTTT":2361907, "GCTTC":1991206, "GCTTG":1067976, "GCTCA":1822694, "GCTCT":3581255, "GCTCC":4221845, "GCTCG":602031, "GCTGA":1899873, "GCTGT":4027077, "GCTGC":5653833, "GCTGG":1859629, "GCCAA":1857881, "GCCAT":2065288, "GCCAC":2102441, "GCCAG":1686680, "GCCTA":1378437, "GCCTT":1822622, "GCCTC":1953932, "GCCTG":1513280, "GCCCA":1866578, "GCCCT":1682769, "GCCCC":1767396, "GCCCG":469110, "GCCGA":493101, "GCCGT":617033, "GCCGC":573446, "GCCGG":539220, "GCGAA":384027, "GCGAT":362433, "GCGAC":406292, "GCGAG":386832, "GCGTA":330189, "GCGTT":540695, "GCGTC":4357663, 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"GGGAG":1151954, "GGGTA":887593, "GGGTT":1014597, "GGGTC":767077, "GGGTG":1591239, "GGGCA":890144, "GGGCT":829873, "GGGCC":838408, "GGGCG":623536, "GGGGA":942097, "GGGGT":1403698, "GGGGC":876173, "GGGGG":17422300 }, "overrepresented_sequences": { } }, "read1_after_filtering": { "total_reads": 26106728, "total_bases": 2081713679, "q20_bases": 2019791369, "q30_bases": 1912447294, "total_cycles": 86, "quality_curves": { 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"T":[35.7611,35.7921,35.7453,35.7842,35.781,35.7499,35.7799,35.7611,35.714,35.7153,35.6113,35.5963,35.6068,35.5809,35.5306,35.5129,35.5435,35.4734,35.5118,35.5357,35.4799,35.4987,35.4746,35.4475,35.4967,35.4829,35.4291,35.4389,35.4205,35.3975,35.4225,35.411,35.3411,35.3918,35.3377,35.2808,35.275,35.2689,35.2586,35.2696,35.3298,35.224,35.2814,35.2616,35.2007,35.28,35.2086,35.1448,35.2097,35.1671,35.1235,35.1611,35.1589,35.0751,35.1043,35.1418,35.0942,35.1019,35.0818,35.0219,35.0043,35.0234,34.9792,35.0354,35.0148,34.9827,34.9424,35.003,34.956,34.9796,34.9059,34.8427,34.8672,34.8853,34.7883,34.8452,34.8892,34.8421,34.8176,34.8414,34.7247,34.789,34.7474,34.7333,34.8018,34.7487], "C":[36.3639,36.3413,36.3206,36.3276,36.3197,36.3087,36.2917,36.2735,36.2489,36.2361,36.178,36.1889,36.1926,36.1887,36.1607,36.1584,36.1487,36.1417,36.152,36.148,36.1274,36.136,36.1089,36.1027,36.1036,36.1027,36.0795,36.0748,36.0398,36.0475,36.0617,36.0497,36.0248,36.0396,36.0239,36.0423,35.9944,36.0031,35.9665,35.9782,35.9419,35.9603,35.9545,35.9575,35.9353,35.927,35.9225,35.9036,35.8725,35.8834,35.8813,35.8958,35.9,35.8583,35.8778,35.8687,35.843,35.8404,35.8245,35.8091,35.7989,35.7847,35.7941,35.7898,35.7766,35.7363,35.7433,35.7313,35.7139,35.7077,35.6768,35.6588,35.6593,35.6478,35.6307,35.653,35.6684,35.6439,35.6438,35.6057,35.5945,35.585,35.584,35.5616,35.5748,35.4795], "G":[35.8855,35.8717,35.8801,35.8752,35.8921,35.8754,35.8466,35.8366,35.8247,35.8225,35.7282,35.7417,35.7317,35.7281,35.7259,35.6914,35.6851,35.6669,35.6719,35.6685,35.6595,35.6324,35.5837,35.6173,35.6086,35.5826,35.5646,35.5469,35.5264,35.5072,35.5085,35.4289,35.4683,35.4865,35.4261,35.4898,35.4351,35.4468,35.4091,35.3976,35.4019,35.3603,35.3512,35.3345,35.2981,35.3087,35.3045,35.342,35.2585,35.263,35.2308,35.3338,35.2654,35.2315,35.2352,35.2237,35.3026,35.2665,35.2483,35.2379,35.2113,35.1666,35.1963,35.163,35.1234,35.1159,35.0738,35.0621,35.0872,35.0576,35.0035,34.9839,34.9831,34.93,34.9392,34.9279,34.9684,34.9861,34.9517,34.8839,34.9002,34.8713,34.8337,34.8223,34.8409,34.7232], 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"GGATT":1427770, "GGATC":1032704, "GGATG":2783789, "GGACA":2802363, "GGACT":1513360, "GGACC":838458, "GGACG":619792, "GGAGA":6180079, "GGAGT":2725029, "GGAGC":3363442, "GGAGG":4930288, "GGTAA":2109047, "GGTAT":1948761, "GGTAC":1397116, "GGTAG":5157383, "GGTTA":3436949, "GGTTT":2692517, "GGTTC":1122040, "GGTTG":5522751, "GGTCA":1904830, "GGTCT":1680863, "GGTCC":889986, "GGTCG":586901, "GGTGA":2852069, "GGTGT":3608255, "GGTGC":1293609, "GGTGG":3605298, "GGCAA":1372477, "GGCAT":1288614, "GGCAC":948895, "GGCAG":2418119, "GGCTA":1460041, "GGCTT":1017448, "GGCTC":866449, "GGCTG":2126353, "GGCCA":1233378, "GGCCT":1167142, "GGCCC":600148, "GGCCG":449175, "GGCGA":521466, "GGCGT":552353, "GGCGC":301252, "GGCGG":607276, "GGGAA":2747727, "GGGAT":2127327, "GGGAC":1537845, "GGGAG":5481862, "GGGTA":2964833, "GGGTT":3497883, "GGGTC":1407270, "GGGTG":2705775, "GGGCA":1429883, "GGGCT":1452609, "GGGCC":814549, "GGGCG":609093, "GGGGA":3149079, "GGGGT":3792460, "GGGGC":1295299, "GGGGG":2953343 }, "overrepresented_sequences": { } }, "read2_after_filtering": { "total_reads": 26106728, "total_bases": 2145283177, "q20_bases": 2063239248, "q30_bases": 1934599910, "total_cycles": 86, "quality_curves": { "A":[36.0241,35.9844,36.0183,36.0095,35.9602,35.9661,35.9282,35.9407,35.8917,35.8605,35.9071,35.9032,35.8701,35.8638,35.8303,35.8306,35.8368,35.8176,35.8277,35.8028,35.8198,35.7798,35.786,35.7438,35.7038,35.7257,35.7405,35.7178,35.6704,35.653,35.6682,35.6353,35.6295,35.5373,35.5731,35.5931,35.5815,35.5297,35.5264,35.4809,35.4544,35.45,35.4371,35.4224,35.3733,35.3521,35.3503,35.3135,35.2751,35.247,35.2065,35.2096,35.2043,35.1422,35.1496,35.1531,35.152,35.1074,35.0497,35.0784,35.0489,34.9899,34.8498,34.8931,34.9464,34.9103,34.8882,34.7663,34.7956,34.8538,34.8433,34.8943,34.8324,34.8227,34.8023,34.778,34.7786,34.7934,34.758,34.7451,34.7205,34.6614,34.5964,34.612,34.5805,34.177], 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"GC":[0.430024,0.430976,0.425838,0.434927,0.424926,0.431803,0.439327,0.43155,0.423355,0.435333,0.431053,0.425655,0.429298,0.435826,0.422239,0.428603,0.426271,0.430387,0.425923,0.42994,0.423506,0.434482,0.42155,0.433518,0.426629,0.428853,0.420601,0.442362,0.424801,0.430449,0.428011,0.436391,0.419942,0.438848,0.428442,0.430316,0.42435,0.436907,0.426804,0.435391,0.426399,0.432834,0.427541,0.431309,0.426927,0.436861,0.423554,0.432118,0.437245,0.435548,0.426511,0.435419,0.429074,0.429145,0.43336,0.437546,0.426295,0.432937,0.429226,0.431094,0.429632,0.431748,0.420485,0.432519,0.421228,0.432069,0.429423,0.427287,0.419982,0.437594,0.423983,0.428923,0.429053,0.435932,0.421399,0.437784,0.43054,0.432087,0.429101,0.440866,0.431908,0.437566,0.428644,0.433768,0.427607,0.435365] }, "kmer_count": { "AAAAA":5149979, "AAAAT":3638919, "AAAAC":3406428, "AAAAG":2004199, "AAATA":3841835, "AAATT":2255449, "AAATC":2066810, "AAATG":3218127, "AAACA":4847937, "AAACT":2453059, "AAACC":2712448, "AAACG":797432, 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"AGGCA":1182278, "AGGCT":1450997, "AGGCC":1210410, "AGGCG":379963, "AGGGA":2207329, "AGGGT":806660, "AGGGC":676412, "AGGGG":600323, "TAAAA":3288750, "TAAAT":2944730, "TAAAC":2722892, "TAAAG":1762336, "TAATA":2841990, "TAATT":2506580, "TAATC":1658228, "TAATG":2225875, "TAACA":3808899, "TAACT":2425859, "TAACC":3386972, "TAACG":553890, "TAAGA":1252106, "TAAGT":1169201, "TAAGC":761474, "TAAGG":724397, "TATAA":2700310, "TATAT":5055707, "TATAC":2653835, "TATAG":1938260, "TATTA":2898040, "TATTT":5085227, "TATTC":2723086, "TATTG":2200558, "TATCA":3479891, "TATCT":3580311, "TATCC":2223411, "TATCG":616936, "TATGA":1766287, "TATGT":2559619, "TATGC":1357440, "TATGG":1210735, "TACAA":3700316, "TACAT":4008939, "TACAC":4047489, "TACAG":3148838, "TACTA":5123619, "TACTT":2739228, "TACTC":2734671, "TACTG":3365293, "TACCA":3859491, "TACCT":3007113, "TACCC":2865621, "TACCG":571658, "TACGA":669055, "TACGT":607939, "TACGC":412258, "TACGG":382120, "TAGAA":1770499, "TAGAT":2147647, "TAGAC":1474717, 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"CACAA":5552691, "CACAT":4399368, "CACAC":15705671, "CACAG":6051897, "CACTA":4554275, "CACTT":2553581, "CACTC":3932715, "CACTG":3698792, "CACCA":4528561, "CACCT":3193281, "CACCC":2623108, "CACCG":810745, "CACGA":572923, "CACGT":828816, "CACGC":966804, "CACGG":545488, "CAGAA":2375714, "CAGAT":2672917, "CAGAC":2777704, "CAGAG":2337175, "CAGTA":2701918, "CAGTT":2553328, "CAGTC":2519690, "CAGTG":2141501, "CAGCA":2911199, "CAGCT":4952929, "CAGCC":2085953, "CAGCG":618570, "CAGGA":1792355, "CAGGT":1676376, "CAGGC":1314268, "CAGGG":1060274, "CTAAA":2457772, "CTAAT":1884357, "CTAAC":2937328, "CTAAG":787154, "CTATA":3426948, "CTATT":2743234, "CTATC":3328053, "CTATG":1691081, "CTACA":4947523, "CTACT":6773701, "CTACC":5001924, "CTACG":726140, "CTAGA":1379641, "CTAGT":1635663, "CTAGC":1287755, "CTAGG":905586, "CTTAA":1632107, "CTTAT":2041396, "CTTAC":1800342, "CTTAG":959593, "CTTTA":2648100, "CTTTT":3449675, "CTTTC":4033331, "CTTTG":2257024, "CTTCA":3503075, "CTTCT":4530961, "CTTCC":2971172, "CTTCG":516332, "CTTGA":1445279, "CTTGT":1919097, "CTTGC":1133354, "CTTGG":901517, "CTCAA":2763035, "CTCAT":3096886, "CTCAC":4084858, "CTCAG":2260757, "CTCTA":4616320, "CTCTT":4783239, "CTCTC":20486585, "CTCTG":5175135, "CTCCA":4708471, "CTCCT":5896842, "CTCCC":5209604, "CTCCG":739175, "CTCGA":435109, "CTCGT":691813, "CTCGC":1077687, "CTCGG":791319, "CTGAA":2250397, "CTGAT":2176055, "CTGAC":2778265, "CTGAG":1626005, "CTGTA":3589220, "CTGTT":3892926, "CTGTC":6400267, "CTGTG":2677632, "CTGCA":2789048, "CTGCT":6132851, "CTGCC":2399385, "CTGCG":510119, "CTGGA":2016036, "CTGGT":2189703, "CTGGC":1339738, "CTGGG":1069880, "CCAAA":2606158, "CCAAT":2060972, "CCAAC":3993623, "CCAAG":1489915, "CCATA":2641571, "CCATT":2687352, "CCATC":3355996, "CCATG":2026435, "CCACA":8272131, "CCACT":4278246, "CCACC":3455907, "CCACG":856803, "CCAGA":2524423, "CCAGT":2201670, "CCAGC":1997386, "CCAGG":1491229, "CCTAA":1940504, "CCTAT":1874558, "CCTAC":4129611, "CCTAG":1248782, "CCTTA":1908361, "CCTTT":2855552, "CCTTC":3073583, "CCTTG":1451648, "CCTCA":3458120, "CCTCT":6355026, "CCTCC":4502392, "CCTCG":653023, "CCTGA":1942083, "CCTGT":3052945, "CCTGC":2025677, "CCTGG":1590078, "CCCAA":2866123, "CCCAT":2270988, "CCCAC":4001681, "CCCAG":2262785, "CCCTA":3215400, "CCCTT":2356633, "CCCTC":4428456, "CCCTG":2455757, "CCCCA":3442581, "CCCCT":3572433, "CCCCC":2543925, "CCCCG":736288, "CCCGA":430407, "CCCGT":622309, "CCCGC":531019, "CCCGG":401691, "CCGAA":366355, "CCGAT":511797, "CCGAC":547244, "CCGAG":469501, "CCGTA":576102, "CCGTT":630213, "CCGTC":732878, "CCGTG":507571, "CCGCA":540165, "CCGCT":707084, "CCGCC":624775, "CCGCG":170896, "CCGGA":367205, "CCGGT":404992, "CCGGC":401925, "CCGGG":330534, "CGAAA":481385, "CGAAT":365689, "CGAAC":395398, "CGAAG":322527, "CGATA":463179, "CGATT":489052, "CGATC":447395, "CGATG":487321, "CGACA":920666, "CGACT":505951, "CGACC":638932, "CGACG":272835, "CGAGA":618072, "CGAGT":338895, "CGAGC":338953, "CGAGG":384010, "CGTAA":462996, "CGTAT":505603, "CGTAC":472142, "CGTAG":448735, "CGTTA":645704, "CGTTT":904227, "CGTTC":665482, "CGTTG":596022, "CGTCA":767677, "CGTCT":936616, "CGTCC":611497, "CGTCG":1427552, "CGTGA":419280, "CGTGT":2672297, "CGTGC":429139, "CGTGG":483925, "CGCAA":562041, "CGCAT":447200, "CGCAC":679095, "CGCAG":507782, "CGCTA":610969, "CGCTT":512673, "CGCTC":1259740, "CGCTG":823755, "CGCCA":658347, "CGCCT":530259, "CGCCC":661701, "CGCCG":348973, "CGCGA":129346, "CGCGT":145340, "CGCGC":236214, "CGCGG":147258, "CGGAA":1759680, "CGGAT":354222, "CGGAC":387479, "CGGAG":455782, "CGGTA":411922, "CGGTT":404656, "CGGTC":464129, "CGGTG":795273, "CGGCA":476722, "CGGCT":476373, "CGGCC":456380, "CGGCG":208674, "CGGGA":333994, "CGGGT":271936, "CGGGC":257713, "CGGGG":311696, "GAAAA":2164108, "GAAAT":2103309, "GAAAC":1726652, "GAAAG":2529035, "GAATA":1507191, "GAATT":1420842, "GAATC":1091966, "GAATG":1475391, "GAACA":2180862, "GAACT":1297054, "GAACC":1153811, "GAACG":548444, "GAAGA":2873750, "GAAGT":1254405, "GAAGC":972926, "GAAGG":1013913, "GATAA":1179656, "GATAT":1514961, "GATAC":1120685, "GATAG":779905, "GATTA":1279022, "GATTT":1942964, "GATTC":1114028, "GATTG":1166398, "GATCA":1391110, "GATCT":1807943, "GATCC":1028821, "GATCG":1764038, "GATGA":1611648, "GATGT":1758496, "GATGC":1075052, "GATGG":1085320, "GACAA":2293729, "GACAT":2249065, "GACAC":2652351, "GACAG":2130890, "GACTA":1352715, "GACTT":1360650, "GACTC":1420352, "GACTG":1724514, "GACCA":2022965, "GACCT":1357478, "GACCC":1360772, "GACCG":394534, "GACGA":607313, "GACGT":509407, "GACGC":405488, "GACGG":418715, "GAGAA":1694740, "GAGAT":1591823, "GAGAC":1586263, "GAGAG":2168502, "GAGTA":967518, "GAGTT":1070447, "GAGTC":890239, "GAGTG":2231597, "GAGCA":1150335, "GAGCT":1154263, "GAGCC":961458, "GAGCG":1651907, "GAGGA":1430914, "GAGGT":993903, "GAGGC":836781, "GAGGG":822302, "GTAAA":1967644, "GTAAT":1720311, "GTAAC":1481871, "GTAAG":766714, "GTATA":1963676, "GTATT":2226437, "GTATC":1431828, "GTATG":1330806, "GTACA":2241772, "GTACT":1741888, "GTACC":1347400, "GTACG":363731, "GTAGA":1800868, "GTAGT":1182118, "GTAGC":2202778, "GTAGG":1910555, "GTTAA":1597449, "GTTAT":1805897, "GTTAC":1610449, "GTTAG":1029117, "GTTTA":2102411, "GTTTT":3274589, "GTTTC":2008653, "GTTTG":2046119, "GTTCA":1936469, "GTTCT":2327108, "GTTCC":1672757, "GTTCG":333409, "GTTGA":1603391, "GTTGT":2092318, "GTTGC":1426333, "GTTGG":971208, "GTCAA":1728496, "GTCAT":2176292, "GTCAC":1776184, "GTCAG":1607660, "GTCTA":1762310, "GTCTT":1952662, "GTCTC":3603977, "GTCTG":2530480, "GTCCA":1753066, "GTCCT":2034536, "GTCCC":1505734, "GTCCG":377180, "GTCGA":353670, "GTCGT":2627677, "GTCGC":546734, "GTCGG":336078, "GTGAA":1492397, "GTGAT":1315997, "GTGAC":1243323, "GTGAG":960013, "GTGTA":4778616, "GTGTT":2557146, "GTGTC":1800337, "GTGTG":4086206, "GTGCA":1313952, "GTGCT":1293937, "GTGCC":950355, "GTGCG":354276, "GTGGA":1339605, "GTGGT":1431875, "GTGGC":907611, "GTGGG":741669, "GCAAA":1478803, "GCAAT":1209849, "GCAAC":1689720, "GCAAG":965772, "GCATA":1115700, "GCATT":1674426, "GCATC":1247244, "GCATG":1161281, "GCACA":2046981, "GCACT":1369792, "GCACC":1284382, "GCACG":394464, "GCAGA":1467019, "GCAGT":1359800, "GCAGC":1796014, "GCAGG":1046046, "GCTAA":1181135, "GCTAT":1391080, "GCTAC":1984905, "GCTAG":897345, "GCTTA":767372, "GCTTT":1920037, "GCTTC":1588842, "GCTTG":856401, "GCTCA":1435039, "GCTCT":2847742, "GCTCC":3392372, "GCTCG":444787, "GCTGA":1513020, "GCTGT":3362422, "GCTGC":4642049, "GCTGG":1459267, "GCCAA":1447989, "GCCAT":1662486, "GCCAC":1657759, "GCCAG":1195491, "GCCTA":1106234, "GCCTT":1466818, "GCCTC":1533196, "GCCTG":1193606, "GCCCA":1418825, "GCCCT":1334224, "GCCCC":1286964, "GCCCG":318222, "GCCGA":367645, "GCCGT":460101, "GCCGC":399273, "GCCGG":344834, "GCGAA":305564, "GCGAT":286283, "GCGAC":307029, "GCGAG":273953, "GCGTA":258674, "GCGTT":428469, "GCGTC":1602873, "GCGTG":386706, "GCGCA":358930, "GCGCT":453093, "GCGCC":341011, "GCGCG":159047, "GCGGA":263913, "GCGGT":348725, "GCGGC":327257, "GCGGG":222527, "GGAAA":2836196, "GGAAT":1122902, "GGAAC":1102381, "GGAAG":2300607, "GGATA":840266, "GGATT":1073187, "GGATC":852658, "GGATG":1042464, "GGACA":1932007, "GGACT":1073313, "GGACC":895419, "GGACG":388893, "GGAGA":1517826, "GGAGT":931426, "GGAGC":866389, "GGAGG":1089539, "GGTAA":948445, "GGTAT":1021784, "GGTAC":977791, "GGTAG":737247, "GGTTA":970634, "GGTTT":1404115, "GGTTC":864892, "GGTTG":894430, "GGTCA":1331568, "GGTCT":1420106, "GGTCC":822727, "GGTCG":491184, "GGTGA":1018021, "GGTGT":1371402, "GGTGC":714112, "GGTGG":1141993, "GGCAA":949902, "GGCAT":949341, "GGCAC":884353, "GGCAG":1062650, "GGCTA":1054305, "GGCTT":953921, "GGCTC":966062, "GGCTG":1186007, "GGCCA":1237617, "GGCCT":1117933, "GGCCC":803326, "GGCCG":350263, "GGCGA":298632, "GGCGT":282502, "GGCGC":294381, "GGCGG":304670, "GGGAA":2097454, "GGGAT":719844, "GGGAC":724467, "GGGAG":790738, "GGGTA":663149, "GGGTT":719987, "GGGTC":575555, "GGGTG":683322, "GGGCA":682756, "GGGCT":635973, "GGGCC":605607, "GGGCG":232019, "GGGGA":654420, "GGGGT":552870, "GGGGC":441683, "GGGGG":741841 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_213505_sample_1703692_S5_L001_R1_001.fastq.gz --in2 lib_213505_sample_1703692_S5_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213505_sample_1703692_S5_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213505_sample_1703692_S5_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213505_sample_1703692_S5_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260806-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_213505_sample_1703692_S5_L001_R2_001.fastp-trim.fq.gz " }