[2024-11-15 21:12:47,562] multiqc [DEBUG ] This is MultiQC v1.14 [2024-11-15 21:12:47,562] multiqc [DEBUG ] Command used: /home/sam/programs/mambaforge/bin/multiqc 101112C14_hisat.out 101112H14_hisat.out 123C14_hisat.out 123H14_hisat.out 131415C14_hisat.out 131415H14_hisat.out 45C14_hisat.out 45H14_hisat.out 6C14_hisat.out 789H14_hisat.out 7C14_hisat.out 89C14_hisat.out [2024-11-15 21:12:48,319] multiqc [WARNING] MultiQC Version v1.25.1 now available! [2024-11-15 21:12:48,319] multiqc [DEBUG ] Working dir : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align [2024-11-15 21:12:48,319] multiqc [DEBUG ] Template : default [2024-11-15 21:12:48,319] multiqc [DEBUG ] Running Python 3.10.10 | packaged by conda-forge | (main, Mar 24 2023, 20:08:06) [GCC 11.3.0] [2024-11-15 21:12:48,320] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, hifiasm, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, gopeaks, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dragen_fastqc, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, umitools, bbmap, bismark, biscuit, diamond, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, cellranger, snpsplit, odgi, pangolin, nextclade, humid, kat, leehom, adapterRemoval, bbduk, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, motus, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, filtlong, prinseqplusplus, pychopper, porechop, pycoqc, minionqc, anglerfish, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2024-11-15 21:12:48,320] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmp4qbjj4os [2024-11-15 21:12:48,818] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/101112C14_hisat.out [2024-11-15 21:12:48,818] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/101112H14_hisat.out [2024-11-15 21:12:48,818] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/123C14_hisat.out [2024-11-15 21:12:48,818] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/123H14_hisat.out [2024-11-15 21:12:48,818] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/131415C14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/131415H14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/45C14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/45H14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/6C14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/789H14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/7C14_hisat.out [2024-11-15 21:12:48,819] multiqc [INFO ] Search path : /media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/89C14_hisat.out [2024-11-15 21:12:48,916] multiqc [DEBUG ] Summary of files that were skipped by the search: [] [2024-11-15 21:12:49,826] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.7.1 [2024-11-15 21:12:49,870] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.7.1 [2024-11-15 21:12:49,889] multiqc [DEBUG ] No samples found: custom_content [2024-11-15 21:12:49,929] multiqc.modules.bowtie2.bowtie2 [INFO ] Found 12 reports [2024-11-15 21:12:49,945] multiqc [INFO ] Compressing plot data [2024-11-15 21:12:49,950] multiqc [WARNING] Previous MultiQC output found! Adjusting filenames.. [2024-11-15 21:12:49,950] multiqc [WARNING] Use -f or --force to overwrite existing reports instead [2024-11-15 21:12:49,950] multiqc [INFO ] Report : multiqc_report_1.html [2024-11-15 21:12:49,950] multiqc [INFO ] Data : multiqc_data_1 [2024-11-15 21:12:49,950] multiqc [DEBUG ] Moving data file from '/tmp/tmp4qbjj4os/multiqc_data' to '/media/4TB_JPG_ext/stanja/gitprojects/coral-embryo-ecotox/output/04_align/multiqc_data_1' [2024-11-15 21:12:50,044] multiqc [INFO ] MultiQC complete