zr3644_8_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 23158534 lines in total Total number of methylation call strings processed: 46317068 Final Cytosine Methylation Report ================================= Total number of C's analysed: 558395155 Total methylated C's in CpG context: 7565296 Total methylated C's in CHG context: 480801 Total methylated C's in CHH context: 2036378 Total C to T conversions in CpG context: 63221600 Total C to T conversions in CHG context: 96372135 Total C to T conversions in CHH context: 388718945 C methylated in CpG context: 10.7% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%