zr3644_17_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 30969523 lines in total Total number of methylation call strings processed: 61939046 Final Cytosine Methylation Report ================================= Total number of C's analysed: 750665344 Total methylated C's in CpG context: 10065889 Total methylated C's in CHG context: 645928 Total methylated C's in CHH context: 2695248 Total C to T conversions in CpG context: 85600717 Total C to T conversions in CHG context: 130302636 Total C to T conversions in CHH context: 521354926 C methylated in CpG context: 10.5% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%