Total number of alignments analysed in zr3644_9_R1_val_1_val_1_val_1_bismark_bt2_pe.bam: 28850161 Total number duplicated alignments removed: 3561640 (12.35%) Duplicated alignments were found at: 3131522 different position(s) Total count of deduplicated leftover sequences: 25288521 (87.65% of total)