zr3644_11_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 29999792 lines in total Total number of methylation call strings processed: 59999584 Final Cytosine Methylation Report ================================= Total number of C's analysed: 726425704 Total methylated C's in CpG context: 9664112 Total methylated C's in CHG context: 603679 Total methylated C's in CHH context: 2547933 Total C to T conversions in CpG context: 83415513 Total C to T conversions in CHG context: 125099513 Total C to T conversions in CHH context: 505094954 C methylated in CpG context: 10.4% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%