zr3616_8_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 76147582 lines in total Total number of methylation call strings processed: 152295164 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1487174194 Total methylated C's in CpG context: 21924067 Total methylated C's in CHG context: 1433325 Total methylated C's in CHH context: 6168440 Total C to T conversions in CpG context: 174580678 Total C to T conversions in CHG context: 265499317 Total C to T conversions in CHH context: 1017568367 C methylated in CpG context: 11.2% C methylated in CHG context: 0.5% C methylated in CHH context: 0.6%