zr3616_5_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 69896131 lines in total Total number of methylation call strings processed: 139792262 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1340317579 Total methylated C's in CpG context: 18817368 Total methylated C's in CHG context: 1235977 Total methylated C's in CHH context: 5346971 Total C to T conversions in CpG context: 159399494 Total C to T conversions in CHG context: 238482390 Total C to T conversions in CHH context: 917035379 C methylated in CpG context: 10.6% C methylated in CHG context: 0.5% C methylated in CHH context: 0.6%