zr3616_2_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 76654951 lines in total Total number of methylation call strings processed: 153309902 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1552669056 Total methylated C's in CpG context: 22304950 Total methylated C's in CHG context: 1458775 Total methylated C's in CHH context: 6198029 Total C to T conversions in CpG context: 185654989 Total C to T conversions in CHG context: 276338681 Total C to T conversions in CHH context: 1060713632 C methylated in CpG context: 10.7% C methylated in CHG context: 0.5% C methylated in CHH context: 0.6%