zr3616_1_R1_val_1_val_1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 74780342 lines in total Total number of methylation call strings processed: 149560684 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1528910858 Total methylated C's in CpG context: 22178795 Total methylated C's in CHG context: 1425230 Total methylated C's in CHH context: 6104487 Total C to T conversions in CpG context: 183605703 Total C to T conversions in CHG context: 272920546 Total C to T conversions in CHH context: 1042676097 C methylated in CpG context: 10.8% C methylated in CHG context: 0.5% C methylated in CHH context: 0.6%