File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
zr3616_1_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	158456630	98314846	29699917	30441459	408	23534504	74780342	1528910858	22178795	183605703	1425230	272920546	6104487	1042676097
zr3616_2_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	164737166	101710457	31882668	31143727	314	25055506	76654951	1552669056	22304950	185654989	1458775	276338681	6198029	1060713632
zr3616_3_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	184625873	113618977	34374786	36631725	385	28828663	84790314	1575986604	23032054	185352566	1430950	279856496	6185606	1080128932
zr3616_4_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	195404524	120720072	36680613	38003343	496	30338689	90381383	1774937848	26332786	210401729	1627724	316973218	6917739	1212684652
zr3616_5_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	146393061	90252664	27270882	28869192	323	20356533	69896131	1340317579	18817368	159399494	1235977	238482390	5346971	917035379
zr3616_6_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	191560039	117719605	35348777	38491262	395	31126061	86593544	1606395418	23293580	191271219	1487557	286752999	6426616	1097163447
zr3616_7_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	147518415	91034375	28400781	28082779	480	20583589	70450786	1365975623	20679742	159721711	1281705	241903748	5585942	936802775
zr3616_8_R1_val_1_val_1_val_1_bismark_bt2_pe.bam	159382736	98193769	30246691	30941942	334	23023146	75170623	1476972567	21640032	175541372	1412896	262956537	6060604	1009361126