C26674	subtractBed	intrn	2430	2483	.	+	.	Parent=CGI_10000320;
	C26674	TRF	Tandem_Repeat	2430	2483	108	+	.	.
C26674	subtractBed	intrn	2860	2913	.	+	.	Parent=CGI_10000320;
	C26674	TRF	Tandem_Repeat	2860	2913	74	+	.	.
C26936	subtractBed	intrn	1323	1346	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	1323	1346	20	-	.	.
C26936	subtractBed	intrn	2202	3359	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	2202	3359	178	-	.	.
C26936	subtractBed	intrn	2205	2915	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	2205	2915	412	-	.	.
C26936	subtractBed	intrn	1613	2275	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	1613	2275	350	-	.	.
C26936	subtractBed	intrn	2271	3059	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	2271	3059	408	-	.	.
C26936	subtractBed	intrn	1484	2260	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy	1484	2260	314	-	.	.
C26936	subtractBed	intrn	2271	2831	.	-	.	Parent=CGI_10000336;
	C26936	WUBlastX	LTR_Gypsy-Gmr1	2271	2831	413	-	.	.
C28348	subtractBed	intrn	3411	3479	.	-	.	Parent=CGI_10000423;
	C28348	WUBlastX	LTR_Gypsy	3411	3479	23	+	.	.
C28512	subtractBed	intrn	4435	4444	.	+	.	Parent=CGI_10000437;
	C28512	WUBlastX	DNA_Kolobok-IS4	4435	4572	82	+	.	.
C28622	subtractBed	intrn	323	508	.	+	.	Parent=CGI_10000452;
	C28622	WUBlastX	DNA_Harbinger	323	508	25	+	.	.
C29186	subtractBed	intrn	1674	1802	.	-	.	Parent=CGI_10000500;
	C29186	TRF	Tandem_Repeat	1674	1802	130	+	.	.
C29186	subtractBed	intrn	1664	1786	.	-	.	Parent=CGI_10000500;
	C29186	TRF	Tandem_Repeat	1664	1786	185	+	.	.
C29388	subtractBed	intrn	2704	2944	.	+	.	Parent=CGI_10000526;
	C29388	TRF	Tandem_Repeat	2704	2944	441	+	.	.
C29388	subtractBed	intrn	3837	4310	.	+	.	Parent=CGI_10000526;
	C29388	WUBlastX	LTR_Gypsy-Cigr	3837	4310	153	+	.	.
C29388	subtractBed	intrn	3852	4424	.	+	.	Parent=CGI_10000526;
	C29388	WUBlastX	LTR_Gypsy-Cigr	3852	4424	138	+	.	.
C29388	subtractBed	intrn	3690	4307	.	+	.	Parent=CGI_10000526;
	C29388	WUBlastX	LTR_Gypsy	3690	4307	99	+	.	.
C29438	subtractBed	intrn	2525	2809	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	2525	2809	73	+	.	.
C29438	subtractBed	intrn	2525	2746	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	2525	2746	99	+	.	.
C29438	subtractBed	intrn	3436	3993	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_L2	3436	3993	55	+	.	.
C29438	subtractBed	intrn	4440	5207	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	4440	5207	220	+	.	.
C29438	subtractBed	intrn	2486	2695	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	2486	2695	84	+	.	.
C29438	subtractBed	intrn	4058	4372	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	4058	4372	173	+	.	.
C29438	subtractBed	intrn	4037	4129	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_L1-Tx1	4037	4129	24	+	.	.
C29438	subtractBed	intrn	4058	4435	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	4058	4435	112	+	.	.
C29438	subtractBed	intrn	2504	2878	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	2504	2878	37	+	.	.
C29438	subtractBed	intrn	3631	4029	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	3631	4029	182	+	.	.
C29438	subtractBed	intrn	2525	2695	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	2525	2695	109	+	.	.
C29438	subtractBed	intrn	3544	3996	.	+	.	Parent=CGI_10000534;
	C29438	WUBlastX	LINE_RTE-X	3544	3996	110	+	.	.
C30058	subtractBed	intrn	1609	2175	.	-	.	Parent=CGI_10000592;
	C30058	WUBlastX	LINE_L2	1609	2175	192	+	.	.
C30058	subtractBed	intrn	1567	1830	.	-	.	Parent=CGI_10000592;
	C30058	WUBlastX	LINE_L2	1567	1830	58	+	.	.
C30118	subtractBed	intrn	693	751	.	+	.	Parent=CGI_10000594;
	C30118	WUBlastX	LINE_Rex-Babar	323	751	32	+	.	.
C30458	subtractBed	intrn	5525	5845	.	-	.	Parent=CGI_10000625;
	C30458	WUBlastX	LINE_L1	5525	5845	96	+	.	.
C30458	subtractBed	intrn	5080	5529	.	-	.	Parent=CGI_10000625;
	C30458	WUBlastX	LINE_L1	5080	5529	193	+	.	.
C30458	subtractBed	intrn	5579	5905	.	-	.	Parent=CGI_10000625;
	C30458	WUBlastX	LINE_L1-Tx1	5579	5905	57	+	.	.
C30500	subtractBed	intrn	2693	3604	.	-	.	Parent=CGI_10000629;
	C30500	TRF	Tandem_Repeat	2693	3604	1208	+	.	.
C30500	subtractBed	intrn	6631	6726	.	-	.	Parent=CGI_10000629;
	C30500	WUBlastX	DNA_IS4EU	6631	7026	79	-	.	.
C30632	subtractBed	intrn	2289	2340	.	+	.	Parent=CGI_10000645;
	C30632	TRF	Tandem_Repeat	2289	2340	104	+	.	.
C30848	subtractBed	intrn	7584	7622	.	+	.	Parent=CGI_10000680;
	C30848	TRF	Tandem_Repeat	7584	7622	78	+	.	.
C31096	subtractBed	intrn	6632	6698	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_Ngaro	6632	7126	210	-	.	.
C31096	subtractBed	intrn	5468	5737	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_DIRS	5468	5737	29	-	.	.
C31096	subtractBed	intrn	5737	6378	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_Ngaro	5737	6378	469	-	.	.
C31096	subtractBed	intrn	5513	5776	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_Ngaro	5513	5776	151	-	.	.
C31096	subtractBed	intrn	6578	6698	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_Ngaro	6578	7393	156	-	.	.
C31096	subtractBed	intrn	5782	6486	.	-	.	Parent=CGI_10000705;
	C31096	WUBlastX	LTR_DIRS	5782	6486	28	-	.	.
C31130	subtractBed	intrn	6126	6275	.	-	.	Parent=CGI_10000707;
	C31130	WUBlastX	LINE_RTE-BovB	6126	6275	44	+	.	.
C31130	subtractBed	intrn	5984	6106	.	-	.	Parent=CGI_10000707;
	C31130	WUBlastX	LINE_RTE-BovB	5984	6106	51	+	.	.
C31322	subtractBed	intrn	7200	7242	.	-	.	Parent=CGI_10000731;
	C31322	TRF	Tandem_Repeat	7200	7242	50	+	.	.
C31322	subtractBed	intrn	7291	8349	.	-	.	Parent=CGI_10000731;
	C31322	WUBlastX	LINE_RTE-X	7291	8349	161	-	.	.
C31322	subtractBed	intrn	7288	8130	.	-	.	Parent=CGI_10000731;
	C31322	WUBlastX	LINE_RTE-X	7288	8130	239	-	.	.
C31366	subtractBed	intrn	6114	6155	.	-	.	Parent=CGI_10000739;
	C31366	TRF	Tandem_Repeat	6114	6155	52	+	.	.
C31366	subtractBed	intrn	5311	5805	.	-	.	Parent=CGI_10000739;
	C31366	WUBlastX	LINE_L1-Tx1	5311	5805	46	+	.	.
C31366	subtractBed	intrn	5311	5661	.	-	.	Parent=CGI_10000739;
	C31366	WUBlastX	LINE_L1-Tx1	5311	5661	65	+	.	.
C31366	subtractBed	intrn	4019	4114	.	-	.	Parent=CGI_10000739;
	C31366	WUBlastX	DNA_Academ	4019	4114	32	+	.	.
C31366	subtractBed	intrn	4143	4196	.	-	.	Parent=CGI_10000739;
	C31366	WUBlastX	DNA_Academ	4143	4196	24	+	.	.
C31366	subtractBed	intrn	1807	2079	.	-	.	Parent=CGI_10000739;
	C31366	WUBlastX	DNA_Academ	1807	2079	87	-	.	.
C31414	subtractBed	intrn	6843	6866	.	+	.	Parent=CGI_10000746;
	C31414	WUBlastX	LTR_Gypsy	6219	6866	61	+	.	.
C31414	subtractBed	intrn	6843	6913	.	+	.	Parent=CGI_10000746;
	C31414	WUBlastX	LTR_Copia	6720	6992	56	+	.	.
C31572	subtractBed	intrn	4851	4937	.	+	.	Parent=CGI_10000770;
	C31572	TRF	Tandem_Repeat	4851	4937	95	+	.	.
C31572	subtractBed	intrn	5033	5154	.	+	.	Parent=CGI_10000770;
	C31572	TRF	Tandem_Repeat	5033	5154	147	+	.	.
C31910	subtractBed	intrn	7876	8388	.	-	.	Parent=CGI_10000814;
	C31910	WUBlastX	DNA_TcMar-Tc2	7876	8388	358	-	.	.
C32216	subtractBed	intrn	3119	3225	.	+	.	Parent=CGI_10000864;
	C32216	WUBlastX	LINE_R1	3097	3249	22	+	.	.
C32222	subtractBed	intrn	2564	2845	.	-	.	Parent=CGI_10000866;
	C32222	WUBlastX	DNA_Kolobok-IS4	2564	2845	74	-	.	.
C32240	subtractBed	intrn	4211	4243	.	-	.	Parent=CGI_10000869;
	C32240	TRF	Tandem_Repeat	4211	4243	66	+	.	.
C32276	subtractBed	intrn	9395	9616	.	-	.	Parent=CGI_10000874;
	C32276	WUBlastX	LTR_ERV1	9395	9616	24	-	.	.
C32276	subtractBed	intrn	9452	9691	.	-	.	Parent=CGI_10000874;
	C32276	WUBlastX	LTR_ERV1	9452	9691	27	-	.	.
C32276	subtractBed	intrn	9446	9607	.	-	.	Parent=CGI_10000874;
	C32276	WUBlastX	LTR_ERV1	9446	9607	31	-	.	.
C32318	subtractBed	intrn	7551	7919	.	+	.	Parent=CGI_10000883;
	C32318	WUBlastX	LINE_L2	7551	7919	63	-	.	.
C32318	subtractBed	intrn	7512	7823	.	+	.	Parent=CGI_10000883;
	C32318	WUBlastX	LINE_L2	7512	7823	71	-	.	.
C32318	subtractBed	intrn	7548	8060	.	+	.	Parent=CGI_10000883;
	C32318	WUBlastX	LINE_L1	7548	8060	56	-	.	.
C32318	subtractBed	intrn	7548	7802	.	+	.	Parent=CGI_10000883;
	C32318	WUBlastX	LINE_L1	7548	7802	93	-	.	.
C32444	subtractBed	intrn	6586	6719	.	+	.	Parent=CGI_10000894;
	C32444	WUBlastX	DNA_Sola	6586	6924	73	+	.	.
C32512	subtractBed	intrn	6405	6641	.	+	.	Parent=CGI_10000906;
	C32512	WUBlastX	LINE_RTE-X	6405	6641	53	+	.	.
C32536	subtractBed	intrn	3746	4375	.	-	.	Parent=CGI_10000910;
	C32536	WUBlastX	LINE_RTE-X	3746	4375	390	-	.	.
C32536	subtractBed	intrn	4363	4767	.	-	.	Parent=CGI_10000910;
	C32536	WUBlastX	LINE_RTE-X	4363	4767	231	-	.	.
C32536	subtractBed	intrn	4324	4992	.	-	.	Parent=CGI_10000910;
	C32536	WUBlastX	LINE_RTE-X	4324	4992	114	-	.	.
C32984	subtractBed	intrn	5881	6078	.	-	.	Parent=CGI_10000975;
	C32984	WUBlastX	LINE_RTE-X	5881	6078	46	+	.	.
C33148	subtractBed	intrn	10045	10938	.	-	.	Parent=CGI_10001003;
	C33148	WUBlastX	DNA_hAT	10045	10938	68	-	.	.
C33308	subtractBed	intrn	2612	2637	.	+	.	Parent=CGI_10001040;
	C33308	TRF	Tandem_Repeat	2612	2637	52	+	.	.
C33368	subtractBed	intrn	7372	7381	.	+	.	Parent=CGI_10001057;
	C33368	WUBlastX	DNA_Kolobok-Hyd	7372	7908	44	+	.	.
C33654	subtractBed	intrn	10157	10190	.	+	.	Parent=CGI_10001111;
	C33654	TRF	Tandem_Repeat	10157	10190	68	+	.	.
C33654	subtractBed	intrn	11885	12190	.	+	.	Parent=CGI_10001111;
	C33654	WUBlastX	LINE_RTE-X	11885	12190	66	+	.	.
C33654	subtractBed	intrn	11840	12361	.	+	.	Parent=CGI_10001111;
	C33654	WUBlastX	LINE_RTE-X	11840	12361	26	+	.	.
C33654	subtractBed	intrn	12014	12313	.	+	.	Parent=CGI_10001111;
	C33654	WUBlastX	LINE_RTE-X	12014	12313	68	+	.	.
C33658	subtractBed	intrn	11681	12196	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	11681	12196	91	+	.	.
C33658	subtractBed	intrn	10830	11423	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	10830	11423	34	+	.	.
C33658	subtractBed	intrn	10953	11453	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	10953	11453	59	+	.	.
C33658	subtractBed	intrn	11642	12106	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	11642	12106	108	+	.	.
C33658	subtractBed	intrn	10759	10881	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	10759	10881	23	+	.	.
C33658	subtractBed	intrn	11145	11531	.	-	.	Parent=CGI_10001113;
	C33658	WUBlastX	DNA_Sola	11145	11531	58	+	.	.
C33664	subtractBed	intrn	10624	11239	.	+	.	Parent=CGI_10001114;
	C33664	TRF	Tandem_Repeat	10624	11239	681	+	.	.
C33664	subtractBed	intrn	10657	11035	.	+	.	Parent=CGI_10001114;
	C33664	TRF	Tandem_Repeat	10657	11035	302	+	.	.
C33664	subtractBed	intrn	11053	11216	.	+	.	Parent=CGI_10001114;
	C33664	TRF	Tandem_Repeat	11053	11216	98	+	.	.
C33708	subtractBed	intrn	8557	8589	.	-	.	Parent=CGI_10001120;
	C33708	TRF	Tandem_Repeat	8557	8589	66	+	.	.
C33708	subtractBed	intrn	9783	9818	.	-	.	Parent=CGI_10001120;
	C33708	TRF	Tandem_Repeat	9783	9818	54	+	.	.
C33864	subtractBed	intrn	7549	7686	.	-	.	Parent=CGI_10001156;
	C33864	WUBlastX	LINE_Jockey	7549	7686	20	-	.	.
C34110	subtractBed	intrn	8742	8786	.	-	.	Parent=CGI_10001212;
	C34110	TRF	Tandem_Repeat	8742	8786	90	+	.	.
C34110	subtractBed	intrn	12603	12776	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_Kolobok-IS4	12603	12776	44	+	.	.
C34110	subtractBed	intrn	13670	14296	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	13670	14296	208	-	.	.
C34110	subtractBed	intrn	13137	13328	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	13137	13328	55	+	.	.
C34110	subtractBed	intrn	12150	12776	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	12150	12776	32	+	.	.
C34110	subtractBed	intrn	12772	13209	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	12772	13209	174	+	.	.
C34110	subtractBed	intrn	12772	13140	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	12772	13140	181	+	.	.
C34110	subtractBed	intrn	13655	14392	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	13655	14392	134	-	.	.
C34110	subtractBed	intrn	11168	11380	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_P	11168	11380	44	+	.	.
C34110	subtractBed	intrn	13670	14869	.	-	.	Parent=CGI_10001212;
	C34110	WUBlastX	DNA_IS4EU	13670	14869	95	-	.	.
C34174	subtractBed	intrn	338	419	.	+	.	Parent=CGI_10001231;
	C34174	TRF	Tandem_Repeat	338	419	110	+	.	.
C34174	subtractBed	intrn	1701	1856	.	-	.	Parent=CGI_10001232;
	C34174	WUBlastX	LTR_Ngaro	1701	1856	45	+	.	.
C34174	subtractBed	intrn	1834	3309	.	-	.	Parent=CGI_10001232;
	C34174	WUBlastX	LTR_Ngaro	1834	3309	906	+	.	.
C34174	subtractBed	intrn	3294	4232	.	-	.	Parent=CGI_10001232;
	C34174	WUBlastX	LTR_Ngaro	3294	4232	321	+	.	.
C34174	subtractBed	intrn	1191	1241	.	-	.	Parent=CGI_10001232;
	C34174	WUBlastX	LTR_Gypsy	1191	1241	22	+	.	.
C34174	subtractBed	intrn	1252	1449	.	-	.	Parent=CGI_10001232;
	C34174	WUBlastX	LTR_Ngaro	1252	1449	79	+	.	.
C34200	subtractBed	intrn	11527	11574	.	+	.	Parent=CGI_10001236;
	C34200	TRF	Tandem_Repeat	11527	11574	87	+	.	.
C34256	subtractBed	intrn	9999	10010	.	+	.	Parent=CGI_10001257;
	C34256	WUBlastX	DNA_Kolobok	9999	10334	118	+	.	.
C34256	subtractBed	intrn	10645	10673	.	+	.	Parent=CGI_10001258;
	C34256	WUBlastX	DNA_Kolobok	10359	10673	89	+	.	.
C34256	subtractBed	intrn	10645	10697	.	+	.	Parent=CGI_10001258;
	C34256	WUBlastX	DNA_Kolobok	10407	10697	151	+	.	.
C34256	subtractBed	intrn	10911	11006	.	+	.	Parent=CGI_10001258;
	C34256	WUBlastX	DNA_Kolobok	10842	11066	36	+	.	.
C34270	subtractBed	intrn	7870	8055	.	-	.	Parent=CGI_10001262;
	C34270	WUBlastX	DNA_hAT-Blackja	7870	8055	30	+	.	.
C34270	subtractBed	intrn	8183	8503	.	-	.	Parent=CGI_10001262;
	C34270	WUBlastX	DNA_hAT-Blackja	8183	8503	55	+	.	.
C34270	subtractBed	intrn	8147	8533	.	-	.	Parent=CGI_10001262;
	C34270	WUBlastX	DNA_hAT-Blackja	8147	8533	52	+	.	.
C34436	subtractBed	intrn	8265	8492	.	+	.	Parent=CGI_10001295;
	C34436	WUBlastX	DNA_Sola	8265	8492	55	+	.	.
C34546	subtractBed	intrn	6043	6752	.	-	.	Parent=CGI_10001308;
	C34546	TRF	Tandem_Repeat	6043	6752	982	+	.	.
C34546	subtractBed	intrn	7209	7655	.	-	.	Parent=CGI_10001308;
	C34546	WUBlastX	DNA_Zator	7209	7655	147	-	.	.
C34546	subtractBed	intrn	11460	11502	.	-	.	Parent=CGI_10001308;
	C34546	TRF	Tandem_Repeat	11460	11502	54	+	.	.
C34726	subtractBed	intrn	9983	10384	.	-	.	Parent=CGI_10001353;
	C34726	WUBlastX	DNA_Maverick	9983	10384	229	+	.	.
C34726	subtractBed	intrn	9908	10402	.	-	.	Parent=CGI_10001353;
	C34726	WUBlastX	DNA_Maverick	9908	10402	42	+	.	.
C34856	subtractBed	intrn	6167	6204	.	+	.	Parent=CGI_10001362;
	C34856	TRF	Tandem_Repeat	6167	6204	58	+	.	.
C34856	subtractBed	intrn	9214	9450	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9214	9450	124	+	.	.
C34856	subtractBed	intrn	9109	9402	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9109	9402	129	+	.	.
C34856	subtractBed	intrn	7920	8885	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	7920	8885	469	-	.	.
C34856	subtractBed	intrn	8860	9027	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	8860	9027	207	-	.	.
C34856	subtractBed	intrn	8836	9372	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy-Cigr	8836	9372	42	+	.	.
C34856	subtractBed	intrn	6317	7141	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LINE_L1-Tx1	6317	7141	42	-	.	.
C34856	subtractBed	intrn	6488	7117	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LINE_L1-Tx1	6488	7117	80	-	.	.
C34856	subtractBed	intrn	9539	10372	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9539	10372	186	+	.	.
C34856	subtractBed	intrn	7723	7962	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	7723	7962	53	-	.	.
C34856	subtractBed	intrn	9229	9402	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9229	9402	151	+	.	.
C34856	subtractBed	intrn	9387	9521	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9387	9521	106	+	.	.
C34856	subtractBed	intrn	9524	10219	.	+	.	Parent=CGI_10001362;
	C34856	WUBlastX	LTR_Gypsy	9524	10219	594	+	.	.
C35006	subtractBed	intrn	3135	3173	.	-	.	Parent=CGI_10001396;
	C35006	TRF	Tandem_Repeat	3135	3173	78	+	.	.
C35006	subtractBed	intrn	2385	2642	.	-	.	Parent=CGI_10001396;
	C35006	WUBlastX	DNA_IS4EU	2385	2642	61	-	.	.
C35006	subtractBed	intrn	4965	5010	.	-	.	Parent=CGI_10001396;
	C35006	TRF	Tandem_Repeat	4965	5010	92	+	.	.
C35042	subtractBed	intrn	2956	3000	.	+	.	Parent=CGI_10001403;
	C35042	TRF	Tandem_Repeat	2956	3000	90	+	.	.
C35042	subtractBed	intrn	3756	3782	.	+	.	Parent=CGI_10001403;
	C35042	TRF	Tandem_Repeat	3756	3782	54	+	.	.
C35042	subtractBed	intrn	8180	8412	.	+	.	Parent=CGI_10001403;
	C35042	TRF	Tandem_Repeat	8180	8412	355	+	.	.
C35042	subtractBed	intrn	8183	8406	.	+	.	Parent=CGI_10001403;
	C35042	TRF	Tandem_Repeat	8183	8406	368	+	.	.
C35042	subtractBed	intrn	8647	8685	.	+	.	Parent=CGI_10001403;
	C35042	TRF	Tandem_Repeat	8647	8685	51	+	.	.
C35042	subtractBed	intrn	13731	13751	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_CR1-L2	13731	13823	63	-	.	.
C35042	subtractBed	intrn	12693	13556	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_RTE-X	12693	13556	206	+	.	.
C35042	subtractBed	intrn	13737	13751	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_CR1-L2	13737	13847	55	-	.	.
C35042	subtractBed	intrn	12364	12729	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_CR1-L2	12364	12729	58	-	.	.
C35042	subtractBed	intrn	9420	10523	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_RTE-X	9420	10523	262	-	.	.
C35042	subtractBed	intrn	13811	13823	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_CR1-L2	13731	13823	63	-	.	.
C35042	subtractBed	intrn	13811	13847	.	+	.	Parent=CGI_10001403;
	C35042	WUBlastX	LINE_CR1-L2	13737	13847	55	-	.	.
C35068	subtractBed	intrn	4704	4988	.	+	.	Parent=CGI_10001414;
	C35068	WUBlastX	DNA_hAT-Tip100	4704	4988	40	+	.	.
C35068	subtractBed	intrn	5680	6423	.	+	.	Parent=CGI_10001414;
	C35068	WUBlastX	DNA_hAT-Tip100	5680	6423	428	+	.	.
C35068	subtractBed	intrn	7386	7673	.	+	.	Parent=CGI_10001414;
	C35068	WUBlastX	DNA_hAT-Tip100	7386	7673	76	+	.	.
C35068	subtractBed	intrn	7296	7610	.	+	.	Parent=CGI_10001414;
	C35068	WUBlastX	DNA_hAT-Tip100	7296	7610	187	+	.	.
C35068	subtractBed	intrn	10160	10334	.	+	.	Parent=CGI_10001414;
	C35068	TRF	Tandem_Repeat	10160	10334	97	+	.	.
C35068	subtractBed	intrn	13095	13280	.	+	.	Parent=CGI_10001414;
	C35068	WUBlastX	DNA_Harbinger	13095	13280	78	+	.	.
C35168	subtractBed	intrn	5877	6770	.	-	.	Parent=CGI_10001430;
	C35168	TRF	Tandem_Repeat	5877	6770	1255	+	.	.
C35168	subtractBed	intrn	8159	8224	.	-	.	Parent=CGI_10001430;
	C35168	TRF	Tandem_Repeat	8159	8224	80	+	.	.
C35168	subtractBed	intrn	8159	8217	.	-	.	Parent=CGI_10001430;
	C35168	TRF	Tandem_Repeat	8159	8217	73	+	.	.
C35168	subtractBed	intrn	12919	12968	.	-	.	Parent=CGI_10001430;
	C35168	TRF	Tandem_Repeat	12919	12968	93	+	.	.
C35172	subtractBed	intrn	1741	3876	.	+	.	Parent=CGI_10001431;
	C35172	WUBlastX	DNA_En-Spm	1741	3876	340	+	.	.
C35172	subtractBed	intrn	2254	3498	.	+	.	Parent=CGI_10001431;
	C35172	WUBlastX	DNA_En-Spm	2254	3498	417	+	.	.
C35172	subtractBed	intrn	1555	3507	.	+	.	Parent=CGI_10001431;
	C35172	WUBlastX	DNA_En-Spm	1555	3507	411	+	.	.
C35260	subtractBed	intrn	5676	5752	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	5676	5752	140	+	.	.
C35260	subtractBed	intrn	6581	7121	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	6581	7121	317	+	.	.
C35260	subtractBed	intrn	6746	7108	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	6746	7108	356	+	.	.
C35260	subtractBed	intrn	7373	7406	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	7373	7406	68	+	.	.
C35260	subtractBed	intrn	13589	13653	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	13589	13653	121	+	.	.
C35260	subtractBed	intrn	13807	13885	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	13807	13885	158	+	.	.
C35260	subtractBed	intrn	15122	15168	.	+	.	Parent=CGI_10001443;
	C35260	TRF	Tandem_Repeat	15122	15168	94	+	.	.
C35282	subtractBed	intrn	7474	7522	.	+	.	Parent=CGI_10001457;
	C35282	TRF	Tandem_Repeat	7474	7522	98	+	.	.
C35532	subtractBed	intrn	15036	15524	.	-	.	Parent=CGI_10001547;
	C35532	WUBlastX	LTR_Ngaro	15036	15524	34	-	.	.
C35532	subtractBed	intrn	13260	14828	.	-	.	Parent=CGI_10001547;
	C35532	WUBlastX	LTR_Ngaro	13260	14828	960	-	.	.
C35532	subtractBed	intrn	12355	13257	.	-	.	Parent=CGI_10001547;
	C35532	WUBlastX	LTR_Ngaro	12355	13257	381	-	.	.
C35532	subtractBed	intrn	15177	15908	.	-	.	Parent=CGI_10001547;
	C35532	WUBlastX	LTR_Ngaro	15177	15908	178	-	.	.
C35532	subtractBed	intrn	17574	17609	.	-	.	Parent=CGI_10001547;
	C35532	TRF	Tandem_Repeat	17574	17609	72	+	.	.
C35840	subtractBed	intrn	821	825	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	712	825	46	-	.	.
C35840	subtractBed	intrn	821	825	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	610	825	32	-	.	.
C35840	subtractBed	intrn	1285	1554	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	1285	1554	194	-	.	.
C35840	subtractBed	intrn	1641	1668	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	1641	1814	76	-	.	.
C35840	subtractBed	intrn	1641	1668	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	1641	1865	66	-	.	.
C35840	subtractBed	intrn	821	846	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	709	846	28	-	.	.
C35840	subtractBed	intrn	1818	2010	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	1813	2010	59	-	.	.
C35840	subtractBed	intrn	1818	1865	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	1641	1865	66	-	.	.
C35840	subtractBed	intrn	3715	3717	.	-	.	Parent=CGI_10001630;
	C35840	WUBlastX	DNA_Harbinger	3715	3924	29	-	.	.
C35952	subtractBed	intrn	436	714	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	DNA_Sola	436	714	47	+	.	.
C35952	subtractBed	intrn	2451	2720	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	2451	2720	56	+	.	.
C35952	subtractBed	intrn	3484	3567	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	3484	3567	20	+	.	.
C35952	subtractBed	intrn	1577	1981	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	DNA_Helitron	1577	1981	154	+	.	.
C35952	subtractBed	intrn	1983	2360	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	DNA_Helitron	1983	2360	44	+	.	.
C35952	subtractBed	intrn	3402	3497	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	3402	3497	20	+	.	.
C35952	subtractBed	intrn	1398	1592	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	RC_Helitron	1398	1592	66	+	.	.
C35952	subtractBed	intrn	448	651	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	DNA_Sola	448	651	69	+	.	.
C35952	subtractBed	intrn	2672	2842	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	2672	2842	36	+	.	.
C35952	subtractBed	intrn	2310	2672	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	2310	2672	52	+	.	.
C35952	subtractBed	intrn	2481	2780	.	+	.	Parent=CGI_10001669;
	C35952	WUBlastX	LINE_L2	2481	2780	45	+	.	.
C36014	subtractBed	intrn	10994	11030	.	-	.	Parent=CGI_10001735;
	C36014	TRF	Tandem_Repeat	10994	11030	74	+	.	.
C36014	subtractBed	intrn	24398	24432	.	-	.	Parent=CGI_10001737;
	C36014	TRF	Tandem_Repeat	24398	24432	54	+	.	.
C36028	subtractBed	intrn	20052	20110	.	-	.	Parent=CGI_10001743;
	C36028	TRF	Tandem_Repeat	20052	20110	118	+	.	.
C36172	subtractBed	intrn	6944	7353	.	+	.	Parent=CGI_10001813;
	C36172	TRF	Tandem_Repeat	6944	7353	186	+	.	.
C36172	subtractBed	intrn	7001	7259	.	+	.	Parent=CGI_10001813;
	C36172	TRF	Tandem_Repeat	7001	7259	238	+	.	.
C36172	subtractBed	intrn	7001	7259	.	+	.	Parent=CGI_10001813;
	C36172	TRF	Tandem_Repeat	7001	7259	301	+	.	.
C36172	subtractBed	intrn	7690	7890	.	+	.	Parent=CGI_10001813;
	C36172	TRF	Tandem_Repeat	7690	7890	176	+	.	.
C36172	subtractBed	intrn	9221	9245	.	+	.	Parent=CGI_10001813;
	C36172	TRF	Tandem_Repeat	9221	9245	50	+	.	.
C36172	subtractBed	intrn	20241	20307	.	+	.	Parent=CGI_10001814;
	C36172	TRF	Tandem_Repeat	20241	20307	134	+	.	.
C36172	subtractBed	intrn	21132	21227	.	+	.	Parent=CGI_10001814;
	C36172	TRF	Tandem_Repeat	21132	21227	71	+	.	.
C36680	subtractBed	intrn	9207	9587	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9207	9587	182	-	.	.
C36680	subtractBed	intrn	9659	9832	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9659	9832	106	-	.	.
C36680	subtractBed	intrn	10596	10697	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	10596	10697	68	-	.	.
C36680	subtractBed	intrn	10720	11013	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	10720	11013	56	-	.	.
C36680	subtractBed	intrn	8898	9581	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	8898	9581	120	-	.	.
C36680	subtractBed	intrn	8507	8938	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	8507	8938	51	-	.	.
C36680	subtractBed	intrn	9674	9937	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9674	9937	73	-	.	.
C36680	subtractBed	intrn	9894	9986	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9894	9986	24	-	.	.
C36680	subtractBed	intrn	9988	10233	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9988	10233	67	-	.	.
C36680	subtractBed	intrn	10593	10742	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	10593	10742	37	-	.	.
C36680	subtractBed	intrn	10021	10293	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	10021	10293	31	-	.	.
C36680	subtractBed	intrn	9303	9650	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	9303	9650	80	-	.	.
C36680	subtractBed	intrn	8669	8938	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_CR1	8669	8938	92	-	.	.
C36680	subtractBed	intrn	10355	10420	.	-	.	Parent=CGI_10002070;
	C36680	WUBlastX	LINE_L2	10355	10420	21	-	.	.
C36680	subtractBed	intrn	17756	17797	.	-	.	Parent=CGI_10002070;
	C36680	TRF	Tandem_Repeat	17756	17797	84	+	.	.
C36680	subtractBed	intrn	17799	17851	.	-	.	Parent=CGI_10002070;
	C36680	TRF	Tandem_Repeat	17799	17851	106	+	.	.
C36680	subtractBed	intrn	33119	33168	.	-	.	Parent=CGI_10002071;
	C36680	TRF	Tandem_Repeat	33119	33168	100	+	.	.
C36680	subtractBed	intrn	33119	33168	.	+	.	Parent=CGI_10002072;
	C36680	TRF	Tandem_Repeat	33119	33168	100	+	.	.
C36680	subtractBed	intrn	35248	35329	.	+	.	Parent=CGI_10002072;
	C36680	TRF	Tandem_Repeat	35248	35329	121	+	.	.
scaffold1	subtractBed	intrn	25683	25723	.	-	.	Parent=CGI_10013463;
	scaffold1	TRF	Tandem_Repeat	25683	25723	50	+	.	.
scaffold1	subtractBed	intrn	74766	74794	.	+	.	Parent=CGI_10013468;
	scaffold1	TRF	Tandem_Repeat	74766	74794	58	+	.	.
scaffold1	subtractBed	intrn	165351	165425	.	+	.	Parent=CGI_10013469;
	scaffold1	TRF	Tandem_Repeat	165351	165425	51	+	.	.
scaffold1	subtractBed	intrn	170615	170980	.	+	.	Parent=CGI_10013469;
	scaffold1	WUBlastX	LINE_L2	170615	170980	46	+	.	.
scaffold1	subtractBed	intrn	170477	170866	.	+	.	Parent=CGI_10013469;
	scaffold1	WUBlastX	LINE_CR1-L2	170477	170866	35	+	.	.
scaffold1	subtractBed	intrn	169915	170229	.	+	.	Parent=CGI_10013469;
	scaffold1	WUBlastX	LINE_CR1-L2	169915	170229	147	+	.	.
scaffold1	subtractBed	intrn	169134	169247	.	+	.	Parent=CGI_10013469;
	scaffold1	WUBlastX	LINE_L2	169134	169247	32	+	.	.
scaffold1	subtractBed	intrn	169906	170277	.	+	.	Parent=CGI_10013469;
	scaffold1	WUBlastX	LINE_CR1	169906	170277	48	+	.	.
scaffold1	subtractBed	intrn	200975	201038	.	+	.	Parent=CGI_10013470;
	scaffold1	TRF	Tandem_Repeat	200975	201038	60	+	.	.
scaffold1	subtractBed	intrn	214108	214194	.	-	.	Parent=CGI_10013471;
	scaffold1	TRF	Tandem_Repeat	214108	214194	131	+	.	.
scaffold1	subtractBed	intrn	217217	217276	.	-	.	Parent=CGI_10013471;
	scaffold1	TRF	Tandem_Repeat	217217	217276	120	+	.	.
scaffold1	subtractBed	intrn	220104	220146	.	-	.	Parent=CGI_10013471;
	scaffold1	TRF	Tandem_Repeat	220104	220146	50	+	.	.
scaffold1	subtractBed	intrn	227115	227170	.	-	.	Parent=CGI_10013471;
	scaffold1	TRF	Tandem_Repeat	227115	227170	87	+	.	.
scaffold1	subtractBed	intrn	236968	237018	.	-	.	Parent=CGI_10013472;
	scaffold1	TRF	Tandem_Repeat	236968	237018	50	+	.	.
scaffold1	subtractBed	intrn	252414	253052	.	-	.	Parent=CGI_10013473;
	scaffold1	WUBlastX	DNA_TcMar-Tc1	252414	253052	109	-	.	.
scaffold1	subtractBed	intrn	253294	253386	.	-	.	Parent=CGI_10013473;
	scaffold1	WUBlastX	DNA_TcMar-Tc1	253294	253386	23	-	.	.
scaffold1	subtractBed	intrn	252414	252653	.	-	.	Parent=CGI_10013473;
	scaffold1	WUBlastX	DNA_TcMar-Tc1	252414	252653	142	-	.	.
scaffold1	subtractBed	intrn	252414	252710	.	-	.	Parent=CGI_10013473;
	scaffold1	WUBlastX	DNA_TcMar-Tc1	252414	252710	139	-	.	.
scaffold1	subtractBed	intrn	253069	253344	.	-	.	Parent=CGI_10013473;
	scaffold1	WUBlastX	DNA_TcMar-Tc1	253069	253344	29	-	.	.
scaffold1	subtractBed	intrn	266781	266966	.	+	.	Parent=CGI_10013474;
	scaffold1	WUBlastX	DNA_Harbinger	266781	266966	84	-	.	.
scaffold1	subtractBed	intrn	266956	267198	.	+	.	Parent=CGI_10013474;
	scaffold1	WUBlastX	DNA_Harbinger	266956	267198	32	-	.	.
scaffold1	subtractBed	intrn	266956	267147	.	+	.	Parent=CGI_10013474;
	scaffold1	WUBlastX	DNA_Harbinger	266956	267147	54	-	.	.
scaffold1	subtractBed	intrn	266706	266864	.	+	.	Parent=CGI_10013474;
	scaffold1	WUBlastX	DNA_Harbinger	266706	266864	85	-	.	.
scaffold1	subtractBed	intrn	288147	288231	.	-	.	Parent=CGI_10013477;
	scaffold1	TRF	Tandem_Repeat	288147	288231	170	+	.	.
scaffold1	subtractBed	intrn	333193	333233	.	-	.	Parent=CGI_10013479;
	scaffold1	TRF	Tandem_Repeat	333193	333233	57	+	.	.
scaffold100	subtractBed	intrn	5003	5036	.	+	.	Parent=CGI_10026403;
	scaffold100	TRF	Tandem_Repeat	5003	5036	59	+	.	.
scaffold100	subtractBed	intrn	11925	12931	.	+	.	Parent=CGI_10026403;
	scaffold100	TRF	Tandem_Repeat	11925	12931	1086	+	.	.
scaffold100	subtractBed	intrn	11921	12916	.	+	.	Parent=CGI_10026403;
	scaffold100	TRF	Tandem_Repeat	11921	12916	1046	+	.	.
scaffold100	subtractBed	intrn	11921	12931	.	+	.	Parent=CGI_10026403;
	scaffold100	TRF	Tandem_Repeat	11921	12931	1061	+	.	.
scaffold100	subtractBed	intrn	83033	83302	.	-	.	Parent=CGI_10026412;
	scaffold100	TRF	Tandem_Repeat	83033	83302	445	+	.	.
scaffold100	subtractBed	intrn	90396	90430	.	+	.	Parent=CGI_10026413;
	scaffold100	TRF	Tandem_Repeat	90396	90430	70	+	.	.
scaffold100	subtractBed	intrn	92372	92396	.	+	.	Parent=CGI_10026413;
	scaffold100	TRF	Tandem_Repeat	92372	92396	50	+	.	.
scaffold100	subtractBed	intrn	96524	96638	.	+	.	Parent=CGI_10026413;
	scaffold100	TRF	Tandem_Repeat	96516	96638	210	+	.	.
scaffold100	subtractBed	intrn	98679	98720	.	+	.	Parent=CGI_10026413;
	scaffold100	TRF	Tandem_Repeat	98679	98720	57	+	.	.
scaffold100	subtractBed	intrn	123548	124085	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	123548	124085	541	+	.	.
scaffold100	subtractBed	intrn	123561	124085	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	123561	124085	443	+	.	.
scaffold100	subtractBed	intrn	123590	124106	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	123590	124106	491	+	.	.
scaffold100	subtractBed	intrn	124624	126170	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	124624	126170	1218	+	.	.
scaffold100	subtractBed	intrn	127499	127566	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	127499	127566	136	+	.	.
scaffold100	subtractBed	intrn	127773	127823	.	-	.	Parent=CGI_10026414;
	scaffold100	TRF	Tandem_Repeat	127773	127823	93	+	.	.
scaffold100	subtractBed	intrn	135155	135213	.	+	.	Parent=CGI_10026415;
	scaffold100	TRF	Tandem_Repeat	135155	135213	109	+	.	.
scaffold100	subtractBed	intrn	145803	145885	.	-	.	Parent=CGI_10026416;
	scaffold100	TRF	Tandem_Repeat	145803	145885	159	+	.	.
scaffold100	subtractBed	intrn	150132	150203	.	-	.	Parent=CGI_10026417;
	scaffold100	TRF	Tandem_Repeat	150132	150203	126	+	.	.
scaffold100	subtractBed	intrn	203661	203707	.	-	.	Parent=CGI_10026419;
	scaffold100	TRF	Tandem_Repeat	203661	203707	94	+	.	.
scaffold100	subtractBed	intrn	266486	266532	.	+	.	Parent=CGI_10026424;
	scaffold100	TRF	Tandem_Repeat	266486	266532	94	+	.	.
scaffold100	subtractBed	intrn	280739	280774	.	+	.	Parent=CGI_10026424;
	scaffold100	TRF	Tandem_Repeat	280739	280774	72	+	.	.
scaffold100	subtractBed	intrn	297229	297325	.	-	.	Parent=CGI_10026426;
	scaffold100	TRF	Tandem_Repeat	297229	297336	121	+	.	.
scaffold100	subtractBed	intrn	335241	335985	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	335241	335985	1122	+	.	.
scaffold100	subtractBed	intrn	336158	336254	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	336158	336254	92	+	.	.
scaffold100	subtractBed	intrn	337310	337426	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	337310	337426	101	+	.	.
scaffold100	subtractBed	intrn	337463	337635	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	337463	337635	168	+	.	.
scaffold100	subtractBed	intrn	337463	337638	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	337463	337638	111	+	.	.
scaffold100	subtractBed	intrn	337481	337658	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	337481	337658	149	+	.	.
scaffold100	subtractBed	intrn	337724	337825	.	-	.	Parent=CGI_10026427;
	scaffold100	TRF	Tandem_Repeat	337724	337825	109	+	.	.
scaffold100	subtractBed	intrn	352737	352778	.	+	.	Parent=CGI_10026429;
	scaffold100	TRF	Tandem_Repeat	352737	352778	84	+	.	.
scaffold100	subtractBed	intrn	353086	353396	.	+	.	Parent=CGI_10026429;
	scaffold100	TRF	Tandem_Repeat	353086	353396	201	+	.	.
scaffold100	subtractBed	intrn	358617	358813	.	+	.	Parent=CGI_10026429;
	scaffold100	TRF	Tandem_Repeat	358617	358813	385	+	.	.
scaffold100	subtractBed	intrn	440457	440482	.	-	.	Parent=CGI_10026438;
	scaffold100	TRF	Tandem_Repeat	440457	440482	52	+	.	.
scaffold100	subtractBed	intrn	461288	461360	.	+	.	Parent=CGI_10026441;
	scaffold100	TRF	Tandem_Repeat	461288	461360	139	+	.	.
scaffold100	subtractBed	intrn	461681	461724	.	+	.	Parent=CGI_10026441;
	scaffold100	TRF	Tandem_Repeat	461681	461724	88	+	.	.
scaffold100	subtractBed	intrn	462058	462104	.	+	.	Parent=CGI_10026441;
	scaffold100	TRF	Tandem_Repeat	462058	462104	94	+	.	.
scaffold100	subtractBed	intrn	573677	573764	.	-	.	Parent=CGI_10026443;
	scaffold100	TRF	Tandem_Repeat	573677	573764	86	+	.	.
scaffold100	subtractBed	intrn	573677	573764	.	-	.	Parent=CGI_10026443;
	scaffold100	TRF	Tandem_Repeat	573677	573764	95	+	.	.
scaffold100	subtractBed	intrn	584137	584164	.	-	.	Parent=CGI_10026443;
	scaffold100	TRF	Tandem_Repeat	584137	584164	56	+	.	.
scaffold100	subtractBed	intrn	611024	611271	.	-	.	Parent=CGI_10026444;
	scaffold100	TRF	Tandem_Repeat	611024	611271	162	+	.	.
scaffold100	subtractBed	intrn	611077	611284	.	-	.	Parent=CGI_10026444;
	scaffold100	TRF	Tandem_Repeat	611077	611284	228	+	.	.
scaffold100	subtractBed	intrn	617475	617555	.	-	.	Parent=CGI_10026445;
	scaffold100	TRF	Tandem_Repeat	617475	617555	117	+	.	.
scaffold100	subtractBed	intrn	637993	638531	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	637993	638531	930	+	.	.
scaffold100	subtractBed	intrn	647051	647242	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	647051	647242	187	+	.	.
scaffold100	subtractBed	intrn	648603	649308	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	648603	649308	876	+	.	.
scaffold100	subtractBed	intrn	648815	648926	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	648815	648926	62	+	.	.
scaffold100	subtractBed	intrn	648603	649308	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	648603	649308	995	+	.	.
scaffold100	subtractBed	intrn	648823	648939	.	+	.	Parent=CGI_10026446;
	scaffold100	TRF	Tandem_Repeat	648823	648939	66	+	.	.
scaffold100	subtractBed	intrn	677882	678762	.	-	.	Parent=CGI_10026448;
	scaffold100	TRF	Tandem_Repeat	677882	678762	1611	+	.	.
scaffold100	subtractBed	intrn	679994	680059	.	-	.	Parent=CGI_10026448;
	scaffold100	TRF	Tandem_Repeat	679994	680059	78	+	.	.
scaffold100	subtractBed	intrn	718167	718697	.	-	.	Parent=CGI_10026448;
	scaffold100	TRF	Tandem_Repeat	718167	718697	712	+	.	.
scaffold100	subtractBed	intrn	1105267	1105315	.	-	.	Parent=CGI_10026464;
	scaffold100	TRF	Tandem_Repeat	1105267	1105315	91	+	.	.
scaffold100	subtractBed	intrn	1117860	1117923	.	-	.	Parent=CGI_10026465;
	scaffold100	TRF	Tandem_Repeat	1117860	1117923	128	+	.	.
scaffold100	subtractBed	intrn	1118462	1118515	.	-	.	Parent=CGI_10026465;
	scaffold100	TRF	Tandem_Repeat	1118462	1118515	108	+	.	.
scaffold100	subtractBed	intrn	1121456	1121489	.	-	.	Parent=CGI_10026465;
	scaffold100	TRF	Tandem_Repeat	1121456	1121489	52	+	.	.
scaffold1000	subtractBed	intrn	23239	23287	.	+	.	Parent=CGI_10013066;
	scaffold1000	TRF	Tandem_Repeat	23239	23287	89	+	.	.
scaffold1000	subtractBed	intrn	24551	24605	.	+	.	Parent=CGI_10013066;
	scaffold1000	TRF	Tandem_Repeat	24551	24605	110	+	.	.
scaffold1000	subtractBed	intrn	76987	77061	.	+	.	Parent=CGI_10013070;
	scaffold1000	TRF	Tandem_Repeat	76987	77061	98	+	.	.
scaffold1000	subtractBed	intrn	116896	116960	.	+	.	Parent=CGI_10013073;
	scaffold1000	TRF	Tandem_Repeat	116896	116960	51	+	.	.
scaffold1000	subtractBed	intrn	118011	118125	.	+	.	Parent=CGI_10013073;
	scaffold1000	TRF	Tandem_Repeat	118011	118125	122	+	.	.
scaffold1000	subtractBed	intrn	147491	147811	.	+	.	Parent=CGI_10013075;
	scaffold1000	WUBlastX	LINE_CR1	147491	147811	50	+	.	.
scaffold1000	subtractBed	intrn	147890	148054	.	+	.	Parent=CGI_10013075;
	scaffold1000	WUBlastX	LINE_CR1-L2	147890	148054	65	+	.	.
scaffold1000	subtractBed	intrn	147366	147653	.	+	.	Parent=CGI_10013075;
	scaffold1000	WUBlastX	LINE_CR1	147366	147653	91	+	.	.
scaffold1000	subtractBed	intrn	150540	150583	.	+	.	Parent=CGI_10013075;
	scaffold1000	TRF	Tandem_Repeat	150540	150583	61	+	.	.
scaffold1000	subtractBed	intrn	180933	181063	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	180933	181063	148	+	.	.
scaffold1000	subtractBed	intrn	180933	181063	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	180933	181063	174	+	.	.
scaffold1000	subtractBed	intrn	181308	181341	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	181308	181341	59	+	.	.
scaffold1000	subtractBed	intrn	182253	182280	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	182253	182280	56	+	.	.
scaffold1000	subtractBed	intrn	182548	182643	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	182548	182643	101	+	.	.
scaffold1000	subtractBed	intrn	182524	182641	.	-	.	Parent=CGI_10013077;
	scaffold1000	TRF	Tandem_Repeat	182524	182641	157	+	.	.
scaffold1000	subtractBed	intrn	256332	256365	.	+	.	Parent=CGI_10013084;
	scaffold1000	TRF	Tandem_Repeat	256332	256365	59	+	.	.
scaffold1000	subtractBed	intrn	256790	256885	.	+	.	Parent=CGI_10013084;
	scaffold1000	WUBlastX	DNA_hAT-Ac	256790	256885	31	+	.	.
scaffold1000	subtractBed	intrn	256886	257053	.	+	.	Parent=CGI_10013084;
	scaffold1000	WUBlastX	DNA_hAT	256886	257053	49	+	.	.
scaffold1000	subtractBed	intrn	256913	257173	.	+	.	Parent=CGI_10013084;
	scaffold1000	WUBlastX	DNA_hAT-Ac	256913	257173	64	+	.	.
scaffold1000	subtractBed	intrn	256748	256888	.	+	.	Parent=CGI_10013084;
	scaffold1000	WUBlastX	DNA_hAT-Ac	256748	256888	23	+	.	.
scaffold1000	subtractBed	intrn	256832	257185	.	+	.	Parent=CGI_10013084;
	scaffold1000	WUBlastX	DNA_hAT-Ac	256832	257185	44	+	.	.
scaffold1000	subtractBed	intrn	262736	262804	.	+	.	Parent=CGI_10013084;
	scaffold1000	TRF	Tandem_Repeat	262736	262804	120	+	.	.
scaffold1000	subtractBed	intrn	262746	262804	.	+	.	Parent=CGI_10013084;
	scaffold1000	TRF	Tandem_Repeat	262746	262804	82	+	.	.
scaffold1000	subtractBed	intrn	273528	273535	.	-	.	Parent=CGI_10013085;
	scaffold1000	WUBlastX	LTR_ERV1	273528	273740	44	-	.	.
scaffold1000	subtractBed	intrn	296377	296574	.	-	.	Parent=CGI_10013088;
	scaffold1000	TRF	Tandem_Repeat	296377	296597	320	+	.	.
scaffold1000	subtractBed	intrn	299410	299442	.	-	.	Parent=CGI_10013088;
	scaffold1000	TRF	Tandem_Repeat	299410	299442	66	+	.	.
scaffold1000	subtractBed	intrn	304180	304234	.	-	.	Parent=CGI_10013088;
	scaffold1000	TRF	Tandem_Repeat	304180	304234	110	+	.	.
scaffold1000	subtractBed	intrn	304180	304234	.	+	.	Parent=CGI_10013089;
	scaffold1000	TRF	Tandem_Repeat	304180	304234	110	+	.	.
scaffold1001	subtractBed	intrn	11372	11531	.	-	.	Parent=CGI_10007116;
	scaffold1001	TRF	Tandem_Repeat	11372	11531	205	+	.	.
scaffold1001	subtractBed	intrn	12110	12846	.	-	.	Parent=CGI_10007116;
	scaffold1001	TRF	Tandem_Repeat	12110	12846	1028	+	.	.
scaffold1001	subtractBed	intrn	16768	16799	.	-	.	Parent=CGI_10007116;
	scaffold1001	TRF	Tandem_Repeat	16768	16799	57	+	.	.
scaffold1001	subtractBed	intrn	25884	26021	.	-	.	Parent=CGI_10007116;
	scaffold1001	WUBlastX	LINE_CR1	25884	26021	26	+	.	.
scaffold1001	subtractBed	intrn	26698	27627	.	-	.	Parent=CGI_10007116;
	scaffold1001	WUBlastX	LINE_L2	26698	27627	239	+	.	.
scaffold1001	subtractBed	intrn	26515	27636	.	-	.	Parent=CGI_10007116;
	scaffold1001	WUBlastX	LINE_L2	26515	27636	131	+	.	.
scaffold1001	subtractBed	intrn	50360	50412	.	-	.	Parent=CGI_10007117;
	scaffold1001	TRF	Tandem_Repeat	50360	50412	54	+	.	.
scaffold1001	subtractBed	intrn	52029	52158	.	-	.	Parent=CGI_10007117;
	scaffold1001	TRF	Tandem_Repeat	52029	52158	93	+	.	.
scaffold1001	subtractBed	intrn	52074	52220	.	-	.	Parent=CGI_10007117;
	scaffold1001	TRF	Tandem_Repeat	52074	52220	73	+	.	.
scaffold1001	subtractBed	intrn	56542	56625	.	-	.	Parent=CGI_10007117;
	scaffold1001	TRF	Tandem_Repeat	56542	56625	123	+	.	.
scaffold1001	subtractBed	intrn	57057	57406	.	-	.	Parent=CGI_10007117;
	scaffold1001	TRF	Tandem_Repeat	57057	57462	607	+	.	.
scaffold1001	subtractBed	intrn	71449	71499	.	-	.	Parent=CGI_10007118;
	scaffold1001	TRF	Tandem_Repeat	71449	71499	102	+	.	.
scaffold1001	subtractBed	intrn	112140	112680	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	112140	112680	682	+	.	.
scaffold1001	subtractBed	intrn	112140	112680	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	112140	112680	657	+	.	.
scaffold1001	subtractBed	intrn	115143	115865	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	115143	115865	959	+	.	.
scaffold1001	subtractBed	intrn	129944	131035	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	129944	131035	1625	+	.	.
scaffold1001	subtractBed	intrn	129058	129174	.	+	.	Parent=CGI_10007119;
	scaffold1001	WUBlastX	LINE_RTE-X	129058	129174	29	-	.	.
scaffold1001	subtractBed	intrn	129275	129733	.	+	.	Parent=CGI_10007119;
	scaffold1001	WUBlastX	LINE_RTE-X	129275	129733	193	-	.	.
scaffold1001	subtractBed	intrn	129242	129790	.	+	.	Parent=CGI_10007119;
	scaffold1001	WUBlastX	LINE_RTE-X	129242	129790	139	-	.	.
scaffold1001	subtractBed	intrn	129079	129180	.	+	.	Parent=CGI_10007119;
	scaffold1001	WUBlastX	LINE_RTE-X	129079	129180	40	-	.	.
scaffold1001	subtractBed	intrn	136467	136500	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	136467	136500	52	+	.	.
scaffold1001	subtractBed	intrn	136670	137356	.	+	.	Parent=CGI_10007119;
	scaffold1001	TRF	Tandem_Repeat	136670	137356	866	+	.	.
scaffold1002	subtractBed	intrn	59300	59591	.	-	.	Parent=CGI_10003691;
	scaffold1002	TRF	Tandem_Repeat	59300	59591	261	+	.	.
scaffold1002	subtractBed	intrn	59505	59595	.	-	.	Parent=CGI_10003691;
	scaffold1002	TRF	Tandem_Repeat	59505	59595	51	+	.	.
scaffold1004	subtractBed	intrn	24633	24682	.	-	.	Parent=CGI_10020760;
	scaffold1004	TRF	Tandem_Repeat	24633	24682	91	+	.	.
scaffold1004	subtractBed	intrn	30755	30809	.	-	.	Parent=CGI_10020760;
	scaffold1004	TRF	Tandem_Repeat	30755	30809	65	+	.	.
scaffold1004	subtractBed	intrn	32350	32379	.	-	.	Parent=CGI_10020760;
	scaffold1004	TRF	Tandem_Repeat	32350	32379	60	+	.	.
scaffold1004	subtractBed	intrn	52379	52419	.	+	.	Parent=CGI_10020761;
	scaffold1004	TRF	Tandem_Repeat	52379	52419	82	+	.	.
scaffold1004	subtractBed	intrn	53966	54014	.	+	.	Parent=CGI_10020761;
	scaffold1004	TRF	Tandem_Repeat	53966	54014	89	+	.	.
scaffold1004	subtractBed	intrn	54013	54054	.	+	.	Parent=CGI_10020761;
	scaffold1004	TRF	Tandem_Repeat	54013	54054	84	+	.	.
scaffold1004	subtractBed	intrn	57014	57072	.	+	.	Parent=CGI_10020761;
	scaffold1004	TRF	Tandem_Repeat	57014	57072	118	+	.	.
scaffold1004	subtractBed	intrn	57141	57165	.	+	.	Parent=CGI_10020761;
	scaffold1004	TRF	Tandem_Repeat	57141	57165	50	+	.	.
scaffold1004	subtractBed	intrn	64797	64829	.	+	.	Parent=CGI_10020762;
	scaffold1004	TRF	Tandem_Repeat	64797	64829	66	+	.	.
scaffold1004	subtractBed	intrn	104661	105360	.	-	.	Parent=CGI_10020763;
	scaffold1004	TRF	Tandem_Repeat	104661	105360	961	+	.	.
scaffold1004	subtractBed	intrn	206084	206156	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	206084	206156	65	+	.	.
scaffold1004	subtractBed	intrn	206063	207261	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	206063	207261	1328	+	.	.
scaffold1004	subtractBed	intrn	206194	207261	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	206194	207261	1298	+	.	.
scaffold1004	subtractBed	intrn	206069	207261	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	206069	207261	1363	+	.	.
scaffold1004	subtractBed	intrn	209301	211464	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	209301	211476	3645	+	.	.
scaffold1004	subtractBed	intrn	209301	211464	.	-	.	Parent=CGI_10020764;
	scaffold1004	TRF	Tandem_Repeat	209301	211476	3617	+	.	.
scaffold1004	subtractBed	intrn	277179	277409	.	-	.	Parent=CGI_10020767;
	scaffold1004	TRF	Tandem_Repeat	277179	277409	255	+	.	.
scaffold1004	subtractBed	intrn	283613	283674	.	-	.	Parent=CGI_10020767;
	scaffold1004	TRF	Tandem_Repeat	283613	283674	117	+	.	.
scaffold1004	subtractBed	intrn	284272	284313	.	-	.	Parent=CGI_10020767;
	scaffold1004	TRF	Tandem_Repeat	284272	284313	84	+	.	.
scaffold1004	subtractBed	intrn	282640	283005	.	-	.	Parent=CGI_10020767;
	scaffold1004	WUBlastX	LINE_Penelope	282640	283005	85	+	.	.
scaffold1004	subtractBed	intrn	281675	282493	.	-	.	Parent=CGI_10020767;
	scaffold1004	WUBlastX	LINE_Penelope	281675	282493	332	+	.	.
scaffold1004	subtractBed	intrn	282628	283137	.	-	.	Parent=CGI_10020767;
	scaffold1004	WUBlastX	LINE_Penelope	282628	283137	68	+	.	.
scaffold1004	subtractBed	intrn	281675	282697	.	-	.	Parent=CGI_10020767;
	scaffold1004	WUBlastX	LINE_Penelope	281675	282697	242	+	.	.
scaffold1004	subtractBed	intrn	292103	292138	.	-	.	Parent=CGI_10020767;
	scaffold1004	TRF	Tandem_Repeat	292103	292138	72	+	.	.
scaffold1004	subtractBed	intrn	310286	310637	.	+	.	Parent=CGI_10020769;
	scaffold1004	TRF	Tandem_Repeat	310286	310637	677	+	.	.
scaffold1004	subtractBed	intrn	311690	311797	.	+	.	Parent=CGI_10020769;
	scaffold1004	TRF	Tandem_Repeat	311690	311797	99	+	.	.
scaffold1004	subtractBed	intrn	331669	331765	.	+	.	Parent=CGI_10020771;
	scaffold1004	TRF	Tandem_Repeat	331669	331765	79	+	.	.
scaffold1004	subtractBed	intrn	399948	400262	.	-	.	Parent=CGI_10020776;
	scaffold1004	TRF	Tandem_Repeat	399948	400262	186	+	.	.
scaffold1004	subtractBed	intrn	431971	431999	.	-	.	Parent=CGI_10020778;
	scaffold1004	TRF	Tandem_Repeat	431971	431999	58	+	.	.
scaffold1004	subtractBed	intrn	450125	450178	.	+	.	Parent=CGI_10020780;
	scaffold1004	TRF	Tandem_Repeat	450125	450178	99	+	.	.
scaffold1004	subtractBed	intrn	450405	450436	.	+	.	Parent=CGI_10020780;
	scaffold1004	TRF	Tandem_Repeat	450405	450436	64	+	.	.
scaffold1004	subtractBed	intrn	478482	478526	.	-	.	Parent=CGI_10020781;
	scaffold1004	TRF	Tandem_Repeat	478482	478526	90	+	.	.
scaffold1004	subtractBed	intrn	485316	485362	.	-	.	Parent=CGI_10020781;
	scaffold1004	TRF	Tandem_Repeat	485316	485362	66	+	.	.
scaffold1004	subtractBed	intrn	486212	486268	.	-	.	Parent=CGI_10020781;
	scaffold1004	WUBlastX	LINE_RTE-BovB	486212	486268	25	-	.	.
scaffold1004	subtractBed	intrn	487249	487770	.	-	.	Parent=CGI_10020781;
	scaffold1004	WUBlastX	LINE_RTE-BovB	487249	487770	43	-	.	.
scaffold1004	subtractBed	intrn	485952	486098	.	-	.	Parent=CGI_10020781;
	scaffold1004	WUBlastX	LINE_RTE-RTE	485952	486098	46	-	.	.
scaffold1004	subtractBed	intrn	485553	486074	.	-	.	Parent=CGI_10020781;
	scaffold1004	WUBlastX	LINE_RTE-BovB	485553	486074	99	-	.	.
scaffold1004	subtractBed	intrn	486256	487689	.	-	.	Parent=CGI_10020781;
	scaffold1004	WUBlastX	LINE_RTE-BovB	486256	487689	513	-	.	.
scaffold1004	subtractBed	intrn	501993	502039	.	+	.	Parent=CGI_10020783;
	scaffold1004	TRF	Tandem_Repeat	501993	502039	85	+	.	.
scaffold1004	subtractBed	intrn	503087	503127	.	+	.	Parent=CGI_10020783;
	scaffold1004	TRF	Tandem_Repeat	503087	503127	82	+	.	.
scaffold1004	subtractBed	intrn	524757	525106	.	+	.	Parent=CGI_10020784;
	scaffold1004	TRF	Tandem_Repeat	524723	525106	624	+	.	.
scaffold1004	subtractBed	intrn	549194	549245	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	549194	549245	52	+	.	.
scaffold1004	subtractBed	intrn	549245	549281	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	549245	549281	74	+	.	.
scaffold1004	subtractBed	intrn	552211	552240	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	552211	552240	60	+	.	.
scaffold1004	subtractBed	intrn	552251	552397	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	552251	552397	110	+	.	.
scaffold1004	subtractBed	intrn	552251	552397	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	552251	552397	132	+	.	.
scaffold1004	subtractBed	intrn	552250	552397	.	+	.	Parent=CGI_10020787;
	scaffold1004	TRF	Tandem_Repeat	552250	552397	118	+	.	.
scaffold1004	subtractBed	intrn	549194	549245	.	-	.	Parent=CGI_10020788;
	scaffold1004	TRF	Tandem_Repeat	549194	549245	52	+	.	.
scaffold1004	subtractBed	intrn	549245	549281	.	-	.	Parent=CGI_10020788;
	scaffold1004	TRF	Tandem_Repeat	549245	549281	74	+	.	.
scaffold1004	subtractBed	intrn	634169	634624	.	-	.	Parent=CGI_10020793;
	scaffold1004	TRF	Tandem_Repeat	634169	634624	756	+	.	.
scaffold1006	subtractBed	intrn	31076	31139	.	+	.	Parent=CGI_10002343;
	scaffold1006	TRF	Tandem_Repeat	31076	31139	128	+	.	.
scaffold1006	subtractBed	intrn	31156	31194	.	+	.	Parent=CGI_10002343;
	scaffold1006	TRF	Tandem_Repeat	31156	31194	51	+	.	.
scaffold1009	subtractBed	intrn	93210	93599	.	-	.	Parent=CGI_10028717;
	scaffold1009	TRF	Tandem_Repeat	93210	93599	396	+	.	.
scaffold1009	subtractBed	intrn	93774	93848	.	-	.	Parent=CGI_10028717;
	scaffold1009	TRF	Tandem_Repeat	93774	93848	150	+	.	.
scaffold1009	subtractBed	intrn	99960	100011	.	-	.	Parent=CGI_10028717;
	scaffold1009	TRF	Tandem_Repeat	99960	100011	97	+	.	.
scaffold1009	subtractBed	intrn	108832	108873	.	-	.	Parent=CGI_10028718;
	scaffold1009	TRF	Tandem_Repeat	108832	108873	84	+	.	.
scaffold1009	subtractBed	intrn	112506	112555	.	-	.	Parent=CGI_10028718;
	scaffold1009	TRF	Tandem_Repeat	112506	112555	66	+	.	.
scaffold1009	subtractBed	intrn	116218	116253	.	-	.	Parent=CGI_10028718;
	scaffold1009	TRF	Tandem_Repeat	116218	116253	72	+	.	.
scaffold1009	subtractBed	intrn	117425	117465	.	-	.	Parent=CGI_10028718;
	scaffold1009	TRF	Tandem_Repeat	117425	117465	73	+	.	.
scaffold1009	subtractBed	intrn	128400	128459	.	-	.	Parent=CGI_10028718;
	scaffold1009	TRF	Tandem_Repeat	128400	128459	120	+	.	.
scaffold1009	subtractBed	intrn	146783	146965	.	+	.	Parent=CGI_10028719;
	scaffold1009	WUBlastX	LTR_Ngaro	146783	146965	62	-	.	.
scaffold1009	subtractBed	intrn	148675	149434	.	+	.	Parent=CGI_10028719;
	scaffold1009	TRF	Tandem_Repeat	148675	149434	1288	+	.	.
scaffold1009	subtractBed	intrn	147562	147879	.	+	.	Parent=CGI_10028719;
	scaffold1009	WUBlastX	LTR_Ngaro	147562	147879	227	-	.	.
scaffold1009	subtractBed	intrn	147878	148510	.	+	.	Parent=CGI_10028719;
	scaffold1009	WUBlastX	LTR_Ngaro	147878	148510	182	-	.	.
scaffold1009	subtractBed	intrn	147324	148268	.	+	.	Parent=CGI_10028719;
	scaffold1009	WUBlastX	LTR_Ngaro	147324	148268	165	-	.	.
scaffold1009	subtractBed	intrn	167534	168688	.	-	.	Parent=CGI_10028721;
	scaffold1009	WUBlastX	LTR_Gypsy	167534	168688	145	-	.	.
scaffold1009	subtractBed	intrn	167708	170077	.	-	.	Parent=CGI_10028721;
	scaffold1009	WUBlastX	LTR_Copia	167708	170077	1469	-	.	.
scaffold1009	subtractBed	intrn	165270	166955	.	-	.	Parent=CGI_10028721;
	scaffold1009	WUBlastX	LTR_Copia	165270	166955	204	-	.	.
scaffold1009	subtractBed	intrn	165216	166661	.	-	.	Parent=CGI_10028721;
	scaffold1009	WUBlastX	LTR_Copia	165216	166661	870	-	.	.
scaffold1009	subtractBed	intrn	169952	170104	.	-	.	Parent=CGI_10028721;
	scaffold1009	WUBlastX	LTR_Lenti	169952	170104	23	-	.	.
scaffold1009	subtractBed	intrn	251705	253387	.	-	.	Parent=CGI_10028723;
	scaffold1009	WUBlastX	LTR_Pao	251705	253387	633	-	.	.
scaffold1009	subtractBed	intrn	255600	255638	.	-	.	Parent=CGI_10028723;
	scaffold1009	TRF	Tandem_Repeat	255600	255638	69	+	.	.
scaffold1009	subtractBed	intrn	256496	256564	.	-	.	Parent=CGI_10028723;
	scaffold1009	TRF	Tandem_Repeat	256496	256564	138	+	.	.
scaffold1009	subtractBed	intrn	266585	267364	.	-	.	Parent=CGI_10028723;
	scaffold1009	TRF	Tandem_Repeat	266585	267364	1065	+	.	.
scaffold1009	subtractBed	intrn	267533	267572	.	-	.	Parent=CGI_10028723;
	scaffold1009	TRF	Tandem_Repeat	267533	267572	53	+	.	.
scaffold1009	subtractBed	intrn	279619	279688	.	-	.	Parent=CGI_10028724;
	scaffold1009	TRF	Tandem_Repeat	279619	279688	133	+	.	.
scaffold1009	subtractBed	intrn	282274	282386	.	-	.	Parent=CGI_10028724;
	scaffold1009	TRF	Tandem_Repeat	282274	282386	67	+	.	.
scaffold1009	subtractBed	intrn	282274	282386	.	-	.	Parent=CGI_10028724;
	scaffold1009	TRF	Tandem_Repeat	282274	282386	106	+	.	.
scaffold1009	subtractBed	intrn	282298	282387	.	-	.	Parent=CGI_10028724;
	scaffold1009	TRF	Tandem_Repeat	282298	282387	85	+	.	.
scaffold1009	subtractBed	intrn	401787	401844	.	-	.	Parent=CGI_10028731;
	scaffold1009	TRF	Tandem_Repeat	401787	401844	116	+	.	.
scaffold1009	subtractBed	intrn	423208	423471	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	423208	423471	36	+	.	.
scaffold1009	subtractBed	intrn	423232	423387	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	423232	423387	104	+	.	.
scaffold1009	subtractBed	intrn	423519	423953	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	423519	423953	261	+	.	.
scaffold1009	subtractBed	intrn	423956	424078	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	423956	424078	38	+	.	.
scaffold1009	subtractBed	intrn	424075	424593	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	424075	424593	193	+	.	.
scaffold1009	subtractBed	intrn	423417	424004	.	-	.	Parent=CGI_10028732;
	scaffold1009	WUBlastX	DNA_hAT-Tip100	423417	424004	145	+	.	.
scaffold1009	subtractBed	intrn	431527	431530	.	+	.	Parent=CGI_10028733;
	scaffold1009	WUBlastX	DNA_Kolobok-IS4	431527	431706	34	+	.	.
scaffold1009	subtractBed	intrn	441790	441840	.	-	.	Parent=CGI_10028735;
	scaffold1009	TRF	Tandem_Repeat	441790	441840	50	+	.	.
scaffold1009	subtractBed	intrn	469749	469868	.	-	.	Parent=CGI_10028737;
	scaffold1009	TRF	Tandem_Repeat	469749	469868	204	+	.	.
scaffold1009	subtractBed	intrn	476387	476731	.	-	.	Parent=CGI_10028737;
	scaffold1009	TRF	Tandem_Repeat	476387	476731	548	+	.	.
scaffold1009	subtractBed	intrn	491464	491518	.	-	.	Parent=CGI_10028738;
	scaffold1009	TRF	Tandem_Repeat	491464	491518	110	+	.	.
scaffold1009	subtractBed	intrn	491703	491867	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	491703	491867	102	+	.	.
scaffold1009	subtractBed	intrn	492737	492901	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	492737	492901	66	+	.	.
scaffold1009	subtractBed	intrn	493213	493449	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	493213	493449	84	+	.	.
scaffold1009	subtractBed	intrn	494087	494239	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	494087	494239	89	+	.	.
scaffold1009	subtractBed	intrn	494582	494689	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	494582	494689	47	+	.	.
scaffold1009	subtractBed	intrn	497569	497703	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	497569	497703	35	+	.	.
scaffold1009	subtractBed	intrn	495384	495569	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	495384	495569	53	+	.	.
scaffold1009	subtractBed	intrn	497005	497202	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	497005	497202	60	+	.	.
scaffold1009	subtractBed	intrn	494985	495083	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	494985	495083	32	+	.	.
scaffold1009	subtractBed	intrn	495770	496030	.	-	.	Parent=CGI_10028738;
	scaffold1009	WUBlastX	DNA_hAT	495770	496030	135	+	.	.
scaffold1009	subtractBed	intrn	522418	523211	.	-	.	Parent=CGI_10028739;
	scaffold1009	TRF	Tandem_Repeat	522418	523211	1218	+	.	.
scaffold1009	subtractBed	intrn	523236	523285	.	-	.	Parent=CGI_10028739;
	scaffold1009	TRF	Tandem_Repeat	523236	523285	55	+	.	.
scaffold1009	subtractBed	intrn	523243	523294	.	-	.	Parent=CGI_10028739;
	scaffold1009	TRF	Tandem_Repeat	523243	523294	59	+	.	.
scaffold1009	subtractBed	intrn	615235	615573	.	+	.	Parent=CGI_10028742;
	scaffold1009	TRF	Tandem_Repeat	615206	615573	556	+	.	.
scaffold1009	subtractBed	intrn	622220	622251	.	+	.	Parent=CGI_10028742;
	scaffold1009	TRF	Tandem_Repeat	622220	622251	64	+	.	.
scaffold1009	subtractBed	intrn	630372	630701	.	+	.	Parent=CGI_10028742;
	scaffold1009	TRF	Tandem_Repeat	630372	630701	213	+	.	.
scaffold1009	subtractBed	intrn	630378	630701	.	+	.	Parent=CGI_10028742;
	scaffold1009	TRF	Tandem_Repeat	630378	630701	219	+	.	.
scaffold1009	subtractBed	intrn	622220	622251	.	-	.	Parent=CGI_10028743;
	scaffold1009	TRF	Tandem_Repeat	622220	622251	64	+	.	.
scaffold1009	subtractBed	intrn	642206	642377	.	-	.	Parent=CGI_10028744;
	scaffold1009	TRF	Tandem_Repeat	642206	642377	119	+	.	.
scaffold1009	subtractBed	intrn	642428	642719	.	-	.	Parent=CGI_10028744;
	scaffold1009	TRF	Tandem_Repeat	642428	642719	331	+	.	.
scaffold1009	subtractBed	intrn	652291	652960	.	-	.	Parent=CGI_10028744;
	scaffold1009	TRF	Tandem_Repeat	652291	652960	828	+	.	.
scaffold1009	subtractBed	intrn	684264	684341	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	684264	684341	133	+	.	.
scaffold1009	subtractBed	intrn	689191	689564	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	689191	689564	324	+	.	.
scaffold1009	subtractBed	intrn	689191	689564	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	689191	689564	418	+	.	.
scaffold1009	subtractBed	intrn	690102	690822	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	690102	690822	682	+	.	.
scaffold1009	subtractBed	intrn	690108	690822	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	690108	690822	444	+	.	.
scaffold1009	subtractBed	intrn	700659	700697	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	700659	700697	78	+	.	.
scaffold1009	subtractBed	intrn	710954	711176	.	+	.	Parent=CGI_10028750;
	scaffold1009	TRF	Tandem_Repeat	710954	711176	403	+	.	.
scaffold1009	subtractBed	intrn	684264	684341	.	-	.	Parent=CGI_10028751;
	scaffold1009	TRF	Tandem_Repeat	684264	684341	133	+	.	.
scaffold1009	subtractBed	intrn	714498	714543	.	+	.	Parent=CGI_10028753;
	scaffold1009	TRF	Tandem_Repeat	714498	714543	60	+	.	.
scaffold1009	subtractBed	intrn	716328	716691	.	+	.	Parent=CGI_10028753;
	scaffold1009	TRF	Tandem_Repeat	716328	716691	457	+	.	.
scaffold1009	subtractBed	intrn	749518	749884	.	-	.	Parent=CGI_10028758;
	scaffold1009	TRF	Tandem_Repeat	749518	749884	428	+	.	.
scaffold1009	subtractBed	intrn	749518	749884	.	-	.	Parent=CGI_10028758;
	scaffold1009	TRF	Tandem_Repeat	749518	749884	513	+	.	.
scaffold1009	subtractBed	intrn	758271	758319	.	-	.	Parent=CGI_10028758;
	scaffold1009	TRF	Tandem_Repeat	758271	758319	98	+	.	.
scaffold1009	subtractBed	intrn	756697	756897	.	-	.	Parent=CGI_10028758;
	scaffold1009	WUBlastX	LINE_RTE-X	756697	756897	61	-	.	.
scaffold1009	subtractBed	intrn	756739	756933	.	-	.	Parent=CGI_10028758;
	scaffold1009	WUBlastX	LINE_RTE-X	756739	756933	46	-	.	.
scaffold1009	subtractBed	intrn	798339	798698	.	-	.	Parent=CGI_10028763;
	scaffold1009	TRF	Tandem_Repeat	798339	798698	371	+	.	.
scaffold1009	subtractBed	intrn	803136	803255	.	-	.	Parent=CGI_10028763;
	scaffold1009	WUBlastX	LINE_RTE-BovB	803136	803255	81	-	.	.
scaffold1009	subtractBed	intrn	803038	803106	.	-	.	Parent=CGI_10028763;
	scaffold1009	WUBlastX	LINE_RTE-BovB	803038	803106	24	-	.	.
scaffold1009	subtractBed	intrn	802731	802928	.	-	.	Parent=CGI_10028763;
	scaffold1009	WUBlastX	LINE_RTE-BovB	802731	802928	93	-	.	.
scaffold1009	subtractBed	intrn	803136	803255	.	+	.	Parent=CGI_10028764;
	scaffold1009	WUBlastX	LINE_RTE-BovB	803136	803255	81	-	.	.
scaffold1009	subtractBed	intrn	803038	803106	.	+	.	Parent=CGI_10028764;
	scaffold1009	WUBlastX	LINE_RTE-BovB	803038	803106	24	-	.	.
scaffold1009	subtractBed	intrn	802731	802928	.	+	.	Parent=CGI_10028764;
	scaffold1009	WUBlastX	LINE_RTE-BovB	802731	802928	93	-	.	.
scaffold1009	subtractBed	intrn	906752	906795	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	906752	906795	88	+	.	.
scaffold1009	subtractBed	intrn	908768	908822	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	908768	908822	110	+	.	.
scaffold1009	subtractBed	intrn	911148	911266	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	911148	911266	150	+	.	.
scaffold1009	subtractBed	intrn	912994	913111	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	912994	913111	130	+	.	.
scaffold1009	subtractBed	intrn	916740	917089	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	916740	917089	399	+	.	.
scaffold1009	subtractBed	intrn	917758	917814	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	917758	917814	98	+	.	.
scaffold1009	subtractBed	intrn	919264	920427	.	+	.	Parent=CGI_10028769;
	scaffold1009	TRF	Tandem_Repeat	919264	920427	1409	+	.	.
scaffold1009	subtractBed	intrn	967429	967474	.	+	.	Parent=CGI_10028771;
	scaffold1009	TRF	Tandem_Repeat	967429	967474	92	+	.	.
scaffold1009	subtractBed	intrn	967863	968230	.	+	.	Parent=CGI_10028771;
	scaffold1009	TRF	Tandem_Repeat	967863	968230	255	+	.	.
scaffold1009	subtractBed	intrn	970410	972401	.	+	.	Parent=CGI_10028771;
	scaffold1009	TRF	Tandem_Repeat	970410	972401	1872	+	.	.
scaffold1009	subtractBed	intrn	970412	971993	.	+	.	Parent=CGI_10028771;
	scaffold1009	TRF	Tandem_Repeat	970412	971993	1224	+	.	.
scaffold1009	subtractBed	intrn	973235	973277	.	+	.	Parent=CGI_10028771;
	scaffold1009	TRF	Tandem_Repeat	973235	973277	86	+	.	.
scaffold1009	subtractBed	intrn	979765	979897	.	-	.	Parent=CGI_10028772;
	scaffold1009	TRF	Tandem_Repeat	979765	979897	97	+	.	.
scaffold1009	subtractBed	intrn	1014367	1015204	.	+	.	Parent=CGI_10028775;
	scaffold1009	TRF	Tandem_Repeat	1014367	1015204	487	+	.	.
scaffold1009	subtractBed	intrn	1014360	1015232	.	+	.	Parent=CGI_10028775;
	scaffold1009	TRF	Tandem_Repeat	1014360	1015232	604	+	.	.
scaffold1009	subtractBed	intrn	1014749	1014819	.	+	.	Parent=CGI_10028775;
	scaffold1009	TRF	Tandem_Repeat	1014749	1014819	52	+	.	.
scaffold1009	subtractBed	intrn	1014367	1015204	.	-	.	Parent=CGI_10028776;
	scaffold1009	TRF	Tandem_Repeat	1014367	1015204	487	+	.	.
scaffold1009	subtractBed	intrn	1014360	1015232	.	-	.	Parent=CGI_10028776;
	scaffold1009	TRF	Tandem_Repeat	1014360	1015232	604	+	.	.
scaffold1009	subtractBed	intrn	1014749	1014819	.	-	.	Parent=CGI_10028776;
	scaffold1009	TRF	Tandem_Repeat	1014749	1014819	52	+	.	.
scaffold1009	subtractBed	intrn	1034388	1034452	.	+	.	Parent=CGI_10028777;
	scaffold1009	TRF	Tandem_Repeat	1034388	1034452	130	+	.	.
scaffold1009	subtractBed	intrn	1039630	1039720	.	+	.	Parent=CGI_10028777;
	scaffold1009	TRF	Tandem_Repeat	1039630	1039720	146	+	.	.
scaffold1009	subtractBed	intrn	1040250	1040353	.	+	.	Parent=CGI_10028777;
	scaffold1009	TRF	Tandem_Repeat	1040250	1040353	120	+	.	.
scaffold1009	subtractBed	intrn	1041209	1041407	.	+	.	Parent=CGI_10028777;
	scaffold1009	TRF	Tandem_Repeat	1041209	1041407	86	+	.	.
scaffold1009	subtractBed	intrn	1056941	1056976	.	-	.	Parent=CGI_10028778;
	scaffold1009	TRF	Tandem_Repeat	1056941	1056976	72	+	.	.
scaffold1009	subtractBed	intrn	1071829	1072313	.	-	.	Parent=CGI_10028779;
	scaffold1009	TRF	Tandem_Repeat	1071829	1072313	424	+	.	.
scaffold1009	subtractBed	intrn	1074260	1074309	.	-	.	Parent=CGI_10028779;
	scaffold1009	TRF	Tandem_Repeat	1074260	1074309	100	+	.	.
scaffold1009	subtractBed	intrn	1076896	1077938	.	-	.	Parent=CGI_10028779;
	scaffold1009	TRF	Tandem_Repeat	1076896	1077938	982	+	.	.
scaffold1009	subtractBed	intrn	1076885	1077938	.	-	.	Parent=CGI_10028779;
	scaffold1009	TRF	Tandem_Repeat	1076885	1077938	988	+	.	.
scaffold1009	subtractBed	intrn	1085983	1086871	.	-	.	Parent=CGI_10028780;
	scaffold1009	TRF	Tandem_Repeat	1085983	1086871	1141	+	.	.
scaffold1009	subtractBed	intrn	1148292	1148816	.	+	.	Parent=CGI_10028785;
	scaffold1009	TRF	Tandem_Repeat	1148292	1148816	658	+	.	.
scaffold1009	subtractBed	intrn	1148292	1148816	.	-	.	Parent=CGI_10028786;
	scaffold1009	TRF	Tandem_Repeat	1148292	1148816	658	+	.	.
scaffold1009	subtractBed	intrn	1179808	1179872	.	+	.	Parent=CGI_10028787;
	scaffold1009	TRF	Tandem_Repeat	1179808	1179872	121	+	.	.
scaffold1009	subtractBed	intrn	1208490	1209292	.	+	.	Parent=CGI_10028788;
	scaffold1009	TRF	Tandem_Repeat	1208490	1209292	635	+	.	.
scaffold1009	subtractBed	intrn	1212325	1213359	.	+	.	Parent=CGI_10028788;
	scaffold1009	WUBlastX	LTR_Pao	1212325	1213359	106	-	.	.
scaffold1009	subtractBed	intrn	1219322	1219367	.	+	.	Parent=CGI_10028788;
	scaffold1009	TRF	Tandem_Repeat	1219322	1219367	76	+	.	.
scaffold1009	subtractBed	intrn	1225840	1226142	.	+	.	Parent=CGI_10028788;
	scaffold1009	WUBlastX	LINE_RTE-X	1225840	1226142	111	-	.	.
scaffold1009	subtractBed	intrn	1225837	1226280	.	+	.	Parent=CGI_10028788;
	scaffold1009	WUBlastX	LINE_RTE-X	1225837	1226280	93	-	.	.
scaffold1009	subtractBed	intrn	1225840	1226364	.	+	.	Parent=CGI_10028788;
	scaffold1009	WUBlastX	LINE_RTE-X	1225840	1226364	29	-	.	.
scaffold1009	subtractBed	intrn	1248369	1248432	.	-	.	Parent=CGI_10028790;
	scaffold1009	TRF	Tandem_Repeat	1248369	1248432	82	+	.	.
scaffold1009	subtractBed	intrn	1248374	1248435	.	-	.	Parent=CGI_10028790;
	scaffold1009	TRF	Tandem_Repeat	1248374	1248435	79	+	.	.
scaffold1009	subtractBed	intrn	1404015	1404338	.	+	.	Parent=CGI_10028796;
	scaffold1009	WUBlastX	LINE_RTE-BovB	1404015	1404338	121	-	.	.
scaffold1009	subtractBed	intrn	1403603	1404013	.	+	.	Parent=CGI_10028796;
	scaffold1009	WUBlastX	LINE_RTE-BovB	1403603	1404013	43	-	.	.
scaffold1009	subtractBed	intrn	1403774	1403941	.	+	.	Parent=CGI_10028796;
	scaffold1009	WUBlastX	LINE_RTE-RTE	1403774	1403941	49	-	.	.
scaffold1009	subtractBed	intrn	1418055	1418081	.	-	.	Parent=CGI_10028797;
	scaffold1009	TRF	Tandem_Repeat	1418055	1418081	54	+	.	.
scaffold1009	subtractBed	intrn	1524365	1524423	.	-	.	Parent=CGI_10028806;
	scaffold1009	TRF	Tandem_Repeat	1524365	1524423	118	+	.	.
scaffold1009	subtractBed	intrn	1534525	1534573	.	-	.	Parent=CGI_10028806;
	scaffold1009	TRF	Tandem_Repeat	1534525	1534573	98	+	.	.
scaffold1009	subtractBed	intrn	1540216	1540255	.	-	.	Parent=CGI_10028807;
	scaffold1009	TRF	Tandem_Repeat	1540216	1540255	62	+	.	.
scaffold1009	subtractBed	intrn	1549651	1549692	.	+	.	Parent=CGI_10028808;
	scaffold1009	TRF	Tandem_Repeat	1549651	1549692	84	+	.	.
scaffold1009	subtractBed	intrn	1553133	1553266	.	+	.	Parent=CGI_10028808;
	scaffold1009	TRF	Tandem_Repeat	1553133	1553266	171	+	.	.
scaffold1009	subtractBed	intrn	1553343	1553502	.	+	.	Parent=CGI_10028808;
	scaffold1009	TRF	Tandem_Repeat	1553343	1553502	182	+	.	.
scaffold1009	subtractBed	intrn	1553709	1553802	.	+	.	Parent=CGI_10028808;
	scaffold1009	TRF	Tandem_Repeat	1553709	1553802	98	+	.	.
scaffold1009	subtractBed	intrn	1575911	1575959	.	-	.	Parent=CGI_10028810;
	scaffold1009	TRF	Tandem_Repeat	1575911	1575959	98	+	.	.
scaffold1009	subtractBed	intrn	1589132	1589162	.	-	.	Parent=CGI_10028811;
	scaffold1009	TRF	Tandem_Repeat	1589132	1589162	62	+	.	.
scaffold1009	subtractBed	intrn	1609733	1609999	.	-	.	Parent=CGI_10028812;
	scaffold1009	TRF	Tandem_Repeat	1609733	1609999	154	+	.	.
scaffold1009	subtractBed	intrn	1609731	1609998	.	-	.	Parent=CGI_10028812;
	scaffold1009	TRF	Tandem_Repeat	1609731	1609998	279	+	.	.
scaffold1009	subtractBed	intrn	1609733	1609999	.	+	.	Parent=CGI_10028813;
	scaffold1009	TRF	Tandem_Repeat	1609733	1609999	154	+	.	.
scaffold1009	subtractBed	intrn	1609731	1609998	.	+	.	Parent=CGI_10028813;
	scaffold1009	TRF	Tandem_Repeat	1609731	1609998	279	+	.	.
scaffold1009	subtractBed	intrn	1621718	1621794	.	+	.	Parent=CGI_10028814;
	scaffold1009	TRF	Tandem_Repeat	1621718	1621794	100	+	.	.
scaffold1009	subtractBed	intrn	1621721	1621794	.	+	.	Parent=CGI_10028814;
	scaffold1009	TRF	Tandem_Repeat	1621721	1621794	103	+	.	.
scaffold1009	subtractBed	intrn	1621721	1621794	.	+	.	Parent=CGI_10028814;
	scaffold1009	TRF	Tandem_Repeat	1621721	1621794	112	+	.	.
scaffold1009	subtractBed	intrn	1633345	1633389	.	+	.	Parent=CGI_10028814;
	scaffold1009	TRF	Tandem_Repeat	1633345	1633389	90	+	.	.
scaffold1009	subtractBed	intrn	1666878	1667305	.	+	.	Parent=CGI_10028815;
	scaffold1009	TRF	Tandem_Repeat	1666878	1667305	608	+	.	.
scaffold1009	subtractBed	intrn	1667523	1667613	.	+	.	Parent=CGI_10028815;
	scaffold1009	TRF	Tandem_Repeat	1667523	1667613	128	+	.	.
scaffold1009	subtractBed	intrn	1761032	1761088	.	-	.	Parent=CGI_10028821;
	scaffold1009	TRF	Tandem_Repeat	1761032	1761088	114	+	.	.
scaffold101	subtractBed	intrn	12976	13141	.	-	.	Parent=CGI_10021631;
	scaffold101	TRF	Tandem_Repeat	12976	13141	159	+	.	.
scaffold101	subtractBed	intrn	122605	122631	.	+	.	Parent=CGI_10021634;
	scaffold101	TRF	Tandem_Repeat	122605	122631	54	+	.	.
scaffold101	subtractBed	intrn	150143	151467	.	+	.	Parent=CGI_10021636;
	scaffold101	TRF	Tandem_Repeat	150143	151467	1591	+	.	.
scaffold101	subtractBed	intrn	157185	157229	.	-	.	Parent=CGI_10021637;
	scaffold101	TRF	Tandem_Repeat	157185	157229	90	+	.	.
scaffold101	subtractBed	intrn	170381	170434	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	170381	170434	58	+	.	.
scaffold101	subtractBed	intrn	175102	176801	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	175102	176801	2517	+	.	.
scaffold101	subtractBed	intrn	175102	176801	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	175102	176801	2551	+	.	.
scaffold101	subtractBed	intrn	176966	177012	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	176966	177012	51	+	.	.
scaffold101	subtractBed	intrn	177362	177400	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	177362	177400	60	+	.	.
scaffold101	subtractBed	intrn	177361	177420	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	177361	177420	66	+	.	.
scaffold101	subtractBed	intrn	177370	177420	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	177370	177420	75	+	.	.
scaffold101	subtractBed	intrn	177386	177424	.	-	.	Parent=CGI_10021638;
	scaffold101	TRF	Tandem_Repeat	177386	177424	69	+	.	.
scaffold101	subtractBed	intrn	261653	261692	.	+	.	Parent=CGI_10021643;
	scaffold101	TRF	Tandem_Repeat	261653	261692	80	+	.	.
scaffold101	subtractBed	intrn	283773	283858	.	+	.	Parent=CGI_10021644;
	scaffold101	TRF	Tandem_Repeat	283773	283858	109	+	.	.
scaffold101	subtractBed	intrn	290891	290935	.	+	.	Parent=CGI_10021644;
	scaffold101	TRF	Tandem_Repeat	290891	290935	90	+	.	.
scaffold101	subtractBed	intrn	312712	312933	.	+	.	Parent=CGI_10021645;
	scaffold101	WUBlastX	LINE_RTE-X	312712	312933	69	+	.	.
scaffold101	subtractBed	intrn	317105	317138	.	+	.	Parent=CGI_10021645;
	scaffold101	TRF	Tandem_Repeat	317105	317138	59	+	.	.
scaffold101	subtractBed	intrn	319962	319988	.	+	.	Parent=CGI_10021645;
	scaffold101	TRF	Tandem_Repeat	319962	319988	54	+	.	.
scaffold101	subtractBed	intrn	322332	322724	.	+	.	Parent=CGI_10021645;
	scaffold101	WUBlastX	DNA_MuDR	322332	322724	90	+	.	.
scaffold101	subtractBed	intrn	321873	322181	.	+	.	Parent=CGI_10021645;
	scaffold101	WUBlastX	DNA_MuDR	321873	322181	97	+	.	.
scaffold101	subtractBed	intrn	312712	312933	.	-	.	Parent=CGI_10021646;
	scaffold101	WUBlastX	LINE_RTE-X	312712	312933	69	+	.	.
scaffold101	subtractBed	intrn	317105	317138	.	-	.	Parent=CGI_10021646;
	scaffold101	TRF	Tandem_Repeat	317105	317138	59	+	.	.
scaffold101	subtractBed	intrn	319962	319988	.	-	.	Parent=CGI_10021646;
	scaffold101	TRF	Tandem_Repeat	319962	319988	54	+	.	.
scaffold101	subtractBed	intrn	322332	322724	.	-	.	Parent=CGI_10021646;
	scaffold101	WUBlastX	DNA_MuDR	322332	322724	90	+	.	.
scaffold101	subtractBed	intrn	321873	322181	.	-	.	Parent=CGI_10021646;
	scaffold101	WUBlastX	DNA_MuDR	321873	322181	97	+	.	.
scaffold101	subtractBed	intrn	380463	381101	.	-	.	Parent=CGI_10021649;
	scaffold101	WUBlastX	LTR_Gypsy	380463	381101	109	-	.	.
scaffold101	subtractBed	intrn	380508	381257	.	-	.	Parent=CGI_10021649;
	scaffold101	WUBlastX	LTR_Gypsy	380508	381383	42	-	.	.
scaffold101	subtractBed	intrn	679262	679315	.	-	.	Parent=CGI_10021653;
	scaffold101	TRF	Tandem_Repeat	679262	679315	90	+	.	.
scaffold101	subtractBed	intrn	678020	678220	.	-	.	Parent=CGI_10021653;
	scaffold101	WUBlastX	DNA_MuDR	678020	678220	68	+	.	.
scaffold101	subtractBed	intrn	677102	677353	.	-	.	Parent=CGI_10021653;
	scaffold101	WUBlastX	DNA_MuDR	677102	677353	31	+	.	.
scaffold101	subtractBed	intrn	677388	677987	.	-	.	Parent=CGI_10021653;
	scaffold101	WUBlastX	DNA_MuDR	677388	677987	191	+	.	.
scaffold101	subtractBed	intrn	677993	678166	.	-	.	Parent=CGI_10021653;
	scaffold101	WUBlastX	DNA_MuDR	677993	678166	21	+	.	.
scaffold101	subtractBed	intrn	694897	694934	.	-	.	Parent=CGI_10021653;
	scaffold101	TRF	Tandem_Repeat	694897	694934	76	+	.	.
scaffold1010	subtractBed	intrn	8353	8386	.	+	.	Parent=CGI_10002872;
	scaffold1010	TRF	Tandem_Repeat	8353	8386	52	+	.	.
scaffold1014	subtractBed	intrn	9125	9173	.	-	.	Parent=CGI_10020255;
	scaffold1014	TRF	Tandem_Repeat	9125	9173	80	+	.	.
scaffold1014	subtractBed	intrn	10630	10669	.	-	.	Parent=CGI_10020255;
	scaffold1014	TRF	Tandem_Repeat	10630	10669	80	+	.	.
scaffold1014	subtractBed	intrn	14282	14579	.	-	.	Parent=CGI_10020255;
	scaffold1014	TRF	Tandem_Repeat	14282	14579	183	+	.	.
scaffold1014	subtractBed	intrn	41410	41660	.	-	.	Parent=CGI_10020257;
	scaffold1014	TRF	Tandem_Repeat	41410	41660	312	+	.	.
scaffold1014	subtractBed	intrn	64596	65213	.	+	.	Parent=CGI_10020260;
	scaffold1014	WUBlastX	DNA_NOF	64596	65213	217	+	.	.
scaffold1014	subtractBed	intrn	69944	70146	.	+	.	Parent=CGI_10020260;
	scaffold1014	TRF	Tandem_Repeat	69944	70146	121	+	.	.
scaffold1014	subtractBed	intrn	89421	89464	.	+	.	Parent=CGI_10020261;
	scaffold1014	TRF	Tandem_Repeat	89421	89464	81	+	.	.
scaffold1014	subtractBed	intrn	90218	90403	.	+	.	Parent=CGI_10020261;
	scaffold1014	TRF	Tandem_Repeat	90218	90403	130	+	.	.
scaffold1014	subtractBed	intrn	128954	129178	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	128954	129178	186	+	.	.
scaffold1014	subtractBed	intrn	139691	140605	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	139674	140605	1468	+	.	.
scaffold1014	subtractBed	intrn	139691	140605	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	139674	140605	1487	+	.	.
scaffold1014	subtractBed	intrn	143502	143533	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	143502	143533	55	+	.	.
scaffold1014	subtractBed	intrn	148266	149122	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	148266	149122	1374	+	.	.
scaffold1014	subtractBed	intrn	149345	149390	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	149345	149390	65	+	.	.
scaffold1014	subtractBed	intrn	149342	149398	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	149342	149398	71	+	.	.
scaffold1014	subtractBed	intrn	150498	150897	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	150498	150897	225	+	.	.
scaffold1014	subtractBed	intrn	156439	156785	.	+	.	Parent=CGI_10020264;
	scaffold1014	TRF	Tandem_Repeat	156439	156785	428	+	.	.
scaffold1014	subtractBed	intrn	168039	168406	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	168039	168406	92	+	.	.
scaffold1014	subtractBed	intrn	168143	168211	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	168143	168211	52	+	.	.
scaffold1014	subtractBed	intrn	168113	168336	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	168113	168336	79	+	.	.
scaffold1014	subtractBed	intrn	168142	168215	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	168142	168215	60	+	.	.
scaffold1014	subtractBed	intrn	168078	168463	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	168078	168463	115	+	.	.
scaffold1014	subtractBed	intrn	171755	171801	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	171755	171801	94	+	.	.
scaffold1014	subtractBed	intrn	163773	164231	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	162610	164231	1880	+	.	.
scaffold1014	subtractBed	intrn	163773	164233	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	162610	164233	1892	+	.	.
scaffold1014	subtractBed	intrn	163773	164231	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	162610	164231	1890	+	.	.
scaffold1014	subtractBed	intrn	173066	173328	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	173066	173328	205	+	.	.
scaffold1014	subtractBed	intrn	191413	191663	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	191413	191663	213	+	.	.
scaffold1014	subtractBed	intrn	197367	197501	.	+	.	Parent=CGI_10020265;
	scaffold1014	TRF	Tandem_Repeat	197367	197501	78	+	.	.
scaffold1014	subtractBed	intrn	204755	205479	.	+	.	Parent=CGI_10020266;
	scaffold1014	TRF	Tandem_Repeat	204755	205479	1234	+	.	.
scaffold1014	subtractBed	intrn	348043	348068	.	-	.	Parent=CGI_10020270;
	scaffold1014	TRF	Tandem_Repeat	348043	348068	52	+	.	.
scaffold1014	subtractBed	intrn	498442	499256	.	-	.	Parent=CGI_10020274;
	scaffold1014	TRF	Tandem_Repeat	498442	499256	1209	+	.	.
scaffold1014	subtractBed	intrn	501327	501400	.	-	.	Parent=CGI_10020274;
	scaffold1014	TRF	Tandem_Repeat	501327	501400	85	+	.	.
scaffold1014	subtractBed	intrn	501327	501400	.	-	.	Parent=CGI_10020274;
	scaffold1014	TRF	Tandem_Repeat	501327	501400	94	+	.	.
scaffold1014	subtractBed	intrn	506238	506297	.	-	.	Parent=CGI_10020274;
	scaffold1014	TRF	Tandem_Repeat	506238	506297	75	+	.	.
scaffold1014	subtractBed	intrn	506238	506297	.	-	.	Parent=CGI_10020274;
	scaffold1014	TRF	Tandem_Repeat	506238	506297	93	+	.	.
scaffold1014	subtractBed	intrn	516343	517020	.	-	.	Parent=CGI_10020274;
	scaffold1014	WUBlastX	DNA_Crypton	516343	517020	65	-	.	.
scaffold1014	subtractBed	intrn	516205	516987	.	-	.	Parent=CGI_10020274;
	scaffold1014	WUBlastX	DNA_Crypton	516205	516987	31	-	.	.
scaffold1014	subtractBed	intrn	564193	564961	.	-	.	Parent=CGI_10020275;
	scaffold1014	TRF	Tandem_Repeat	564193	564961	1202	+	.	.
scaffold1014	subtractBed	intrn	569597	569624	.	-	.	Parent=CGI_10020275;
	scaffold1014	TRF	Tandem_Repeat	569597	569624	56	+	.	.
scaffold1014	subtractBed	intrn	572663	573371	.	-	.	Parent=CGI_10020275;
	scaffold1014	TRF	Tandem_Repeat	572663	573371	940	+	.	.
scaffold1014	subtractBed	intrn	591370	591849	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L1-Tx1	591370	591849	279	-	.	.
scaffold1014	subtractBed	intrn	593595	594122	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L2	593595	594122	82	-	.	.
scaffold1014	subtractBed	intrn	593685	594149	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L2	593685	594149	89	-	.	.
scaffold1014	subtractBed	intrn	591569	592495	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L1-Tx1	591569	592495	261	-	.	.
scaffold1014	subtractBed	intrn	592692	593300	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L1-Tx1	592692	593300	385	-	.	.
scaffold1014	subtractBed	intrn	592492	592731	.	-	.	Parent=CGI_10020275;
	scaffold1014	WUBlastX	LINE_L1	592492	592731	91	-	.	.
scaffold1014	subtractBed	intrn	616596	616661	.	+	.	Parent=CGI_10020277;
	scaffold1014	TRF	Tandem_Repeat	616596	616661	105	+	.	.
scaffold1016	subtractBed	intrn	152177	152333	.	-	.	Parent=CGI_10016887;
	scaffold1016	TRF	Tandem_Repeat	152177	152333	224	+	.	.
scaffold1016	subtractBed	intrn	152522	152615	.	-	.	Parent=CGI_10016887;
	scaffold1016	TRF	Tandem_Repeat	152522	152615	89	+	.	.
scaffold1016	subtractBed	intrn	152699	152841	.	-	.	Parent=CGI_10016887;
	scaffold1016	TRF	Tandem_Repeat	152699	152841	124	+	.	.
scaffold1016	subtractBed	intrn	153516	153779	.	-	.	Parent=CGI_10016887;
	scaffold1016	WUBlastX	LINE_Penelope	153516	153779	46	+	.	.
scaffold1016	subtractBed	intrn	202463	202536	.	-	.	Parent=CGI_10016888;
	scaffold1016	TRF	Tandem_Repeat	202463	202536	84	+	.	.
scaffold1016	subtractBed	intrn	202463	202548	.	-	.	Parent=CGI_10016888;
	scaffold1016	TRF	Tandem_Repeat	202463	202548	84	+	.	.
scaffold1016	subtractBed	intrn	246923	246952	.	-	.	Parent=CGI_10016890;
	scaffold1016	TRF	Tandem_Repeat	246923	246952	60	+	.	.
scaffold1016	subtractBed	intrn	283873	284367	.	-	.	Parent=CGI_10016891;
	scaffold1016	WUBlastX	DNA_P	283873	284367	69	-	.	.
scaffold1016	subtractBed	intrn	283942	284322	.	-	.	Parent=CGI_10016891;
	scaffold1016	WUBlastX	DNA_P	283942	284322	92	-	.	.
scaffold1016	subtractBed	intrn	283867	284517	.	-	.	Parent=CGI_10016891;
	scaffold1016	WUBlastX	DNA_P	283867	284538	43	-	.	.
scaffold1016	subtractBed	intrn	306544	306672	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1-Tx1	306544	306672	96	+	.	.
scaffold1016	subtractBed	intrn	306665	307249	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1-Tx1	306665	307249	178	+	.	.
scaffold1016	subtractBed	intrn	308033	308197	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1-Tx1	308033	308197	39	+	.	.
scaffold1016	subtractBed	intrn	308211	308345	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1-Tx1	308211	308345	56	+	.	.
scaffold1016	subtractBed	intrn	306261	306518	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1	306261	306518	21	+	.	.
scaffold1016	subtractBed	intrn	306363	306545	.	-	.	Parent=CGI_10016894;
	scaffold1016	WUBlastX	LINE_L1	306363	306545	63	+	.	.
scaffold1016	subtractBed	intrn	434121	434250	.	+	.	Parent=CGI_10016898;
	scaffold1016	WUBlastX	DNA_IS4EU	433861	434250	73	+	.	.
scaffold1016	subtractBed	intrn	436147	436197	.	-	.	Parent=CGI_10016899;
	scaffold1016	TRF	Tandem_Repeat	436147	436197	102	+	.	.
scaffold1016	subtractBed	intrn	436430	436483	.	-	.	Parent=CGI_10016899;
	scaffold1016	TRF	Tandem_Repeat	436430	436483	99	+	.	.
scaffold1016	subtractBed	intrn	436147	436197	.	+	.	Parent=CGI_10016900;
	scaffold1016	TRF	Tandem_Repeat	436147	436197	102	+	.	.
scaffold1016	subtractBed	intrn	436430	436483	.	+	.	Parent=CGI_10016900;
	scaffold1016	TRF	Tandem_Repeat	436430	436483	99	+	.	.
scaffold1016	subtractBed	intrn	467768	467989	.	+	.	Parent=CGI_10016902;
	scaffold1016	WUBlastX	DNA_Kolobok	467768	467989	42	+	.	.
scaffold1016	subtractBed	intrn	468113	468271	.	+	.	Parent=CGI_10016902;
	scaffold1016	WUBlastX	DNA_Kolobok	468113	468271	37	+	.	.
scaffold1016	subtractBed	intrn	468273	468362	.	+	.	Parent=CGI_10016902;
	scaffold1016	WUBlastX	DNA_Kolobok	468273	468362	33	+	.	.
scaffold1016	subtractBed	intrn	468926	469234	.	+	.	Parent=CGI_10016902;
	scaffold1016	WUBlastX	DNA_Kolobok	468926	469234	92	+	.	.
scaffold1017	subtractBed	intrn	3128	4381	.	-	.	Parent=CGI_10024977;
	scaffold1017	WUBlastX	LINE_L1-Tx1	3128	4381	357	+	.	.
scaffold1017	subtractBed	intrn	3071	3406	.	-	.	Parent=CGI_10024977;
	scaffold1017	WUBlastX	LINE_L1	3071	3406	28	+	.	.
scaffold1017	subtractBed	intrn	11243	11283	.	-	.	Parent=CGI_10024978;
	scaffold1017	TRF	Tandem_Repeat	11243	11283	55	+	.	.
scaffold1017	subtractBed	intrn	58627	58827	.	-	.	Parent=CGI_10024980;
	scaffold1017	WUBlastX	LINE_RTE-X	58627	58827	85	-	.	.
scaffold1017	subtractBed	intrn	58507	58833	.	-	.	Parent=CGI_10024980;
	scaffold1017	WUBlastX	LINE_RTE-X	58507	58833	34	-	.	.
scaffold1017	subtractBed	intrn	95667	96480	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	95667	96480	1385	+	.	.
scaffold1017	subtractBed	intrn	97225	97929	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	97225	97929	911	+	.	.
scaffold1017	subtractBed	intrn	97221	97929	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	97221	97929	1149	+	.	.
scaffold1017	subtractBed	intrn	111598	111855	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	111598	111855	394	+	.	.
scaffold1017	subtractBed	intrn	114815	114846	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	114815	114846	55	+	.	.
scaffold1017	subtractBed	intrn	121699	121749	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	121699	121749	102	+	.	.
scaffold1017	subtractBed	intrn	123178	123214	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	123178	123214	74	+	.	.
scaffold1017	subtractBed	intrn	129967	131082	.	+	.	Parent=CGI_10024982;
	scaffold1017	TRF	Tandem_Repeat	129967	131082	1739	+	.	.
scaffold1017	subtractBed	intrn	143713	143898	.	-	.	Parent=CGI_10024983;
	scaffold1017	TRF	Tandem_Repeat	143713	143916	345	+	.	.
scaffold1017	subtractBed	intrn	148235	148499	.	-	.	Parent=CGI_10024983;
	scaffold1017	TRF	Tandem_Repeat	148235	148499	291	+	.	.
scaffold1017	subtractBed	intrn	149318	149454	.	-	.	Parent=CGI_10024983;
	scaffold1017	TRF	Tandem_Repeat	149318	149454	172	+	.	.
scaffold1017	subtractBed	intrn	187626	187809	.	+	.	Parent=CGI_10024986;
	scaffold1017	TRF	Tandem_Repeat	187626	187809	282	+	.	.
scaffold1017	subtractBed	intrn	190946	191001	.	+	.	Parent=CGI_10024986;
	scaffold1017	WUBlastX	LTR_Copia	190946	191086	26	+	.	.
scaffold1017	subtractBed	intrn	194427	194582	.	+	.	Parent=CGI_10024986;
	scaffold1017	TRF	Tandem_Repeat	194427	194582	145	+	.	.
scaffold1017	subtractBed	intrn	205582	205709	.	-	.	Parent=CGI_10024987;
	scaffold1017	TRF	Tandem_Repeat	205582	205709	109	+	.	.
scaffold1017	subtractBed	intrn	218189	218933	.	+	.	Parent=CGI_10024989;
	scaffold1017	TRF	Tandem_Repeat	218189	218933	1224	+	.	.
scaffold1017	subtractBed	intrn	241759	241797	.	+	.	Parent=CGI_10024989;
	scaffold1017	TRF	Tandem_Repeat	241759	241797	78	+	.	.
scaffold1017	subtractBed	intrn	245450	245507	.	-	.	Parent=CGI_10024990;
	scaffold1017	TRF	Tandem_Repeat	245450	245507	116	+	.	.
scaffold1017	subtractBed	intrn	274979	275012	.	+	.	Parent=CGI_10024993;
	scaffold1017	TRF	Tandem_Repeat	274979	275012	52	+	.	.
scaffold1017	subtractBed	intrn	279273	279316	.	+	.	Parent=CGI_10024994;
	scaffold1017	TRF	Tandem_Repeat	279273	279316	79	+	.	.
scaffold1017	subtractBed	intrn	285562	285622	.	+	.	Parent=CGI_10024994;
	scaffold1017	TRF	Tandem_Repeat	285562	285622	122	+	.	.
scaffold1017	subtractBed	intrn	289077	289114	.	+	.	Parent=CGI_10024994;
	scaffold1017	TRF	Tandem_Repeat	289077	289114	58	+	.	.
scaffold1017	subtractBed	intrn	289069	289111	.	+	.	Parent=CGI_10024994;
	scaffold1017	TRF	Tandem_Repeat	289069	289111	50	+	.	.
scaffold1017	subtractBed	intrn	357742	357776	.	+	.	Parent=CGI_10025000;
	scaffold1017	TRF	Tandem_Repeat	357742	357776	70	+	.	.
scaffold1017	subtractBed	intrn	360101	360132	.	+	.	Parent=CGI_10025000;
	scaffold1017	TRF	Tandem_Repeat	360101	360132	64	+	.	.
scaffold1017	subtractBed	intrn	390919	391094	.	+	.	Parent=CGI_10025004;
	scaffold1017	TRF	Tandem_Repeat	390919	391094	90	+	.	.
scaffold1017	subtractBed	intrn	403903	404178	.	-	.	Parent=CGI_10025006;
	scaffold1017	WUBlastX	LINE_L2	403903	404178	76	+	.	.
scaffold1017	subtractBed	intrn	417503	417578	.	-	.	Parent=CGI_10025006;
	scaffold1017	TRF	Tandem_Repeat	417503	417578	152	+	.	.
scaffold1017	subtractBed	intrn	427053	427113	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	427053	427113	115	+	.	.
scaffold1017	subtractBed	intrn	433168	433219	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	433168	433219	95	+	.	.
scaffold1017	subtractBed	intrn	453556	454122	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	453556	454122	301	+	.	.
scaffold1017	subtractBed	intrn	453587	454119	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	453587	454119	282	+	.	.
scaffold1017	subtractBed	intrn	453603	453764	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	453603	453764	135	+	.	.
scaffold1017	subtractBed	intrn	453818	454132	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	453818	454132	377	+	.	.
scaffold1017	subtractBed	intrn	454965	456251	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	454965	456251	1188	+	.	.
scaffold1017	subtractBed	intrn	464460	464506	.	-	.	Parent=CGI_10025007;
	scaffold1017	TRF	Tandem_Repeat	464460	464506	51	+	.	.
scaffold1017	subtractBed	intrn	433168	433219	.	+	.	Parent=CGI_10025008;
	scaffold1017	TRF	Tandem_Repeat	433168	433219	95	+	.	.
scaffold1017	subtractBed	intrn	476317	476350	.	-	.	Parent=CGI_10025010;
	scaffold1017	TRF	Tandem_Repeat	476317	476350	50	+	.	.
scaffold1017	subtractBed	intrn	480864	480919	.	-	.	Parent=CGI_10025010;
	scaffold1017	TRF	Tandem_Repeat	480864	480919	53	+	.	.
scaffold1017	subtractBed	intrn	506903	506972	.	+	.	Parent=CGI_10025013;
	scaffold1017	TRF	Tandem_Repeat	506903	506972	131	+	.	.
scaffold1017	subtractBed	intrn	524039	524135	.	-	.	Parent=CGI_10025014;
	scaffold1017	TRF	Tandem_Repeat	524039	524135	56	+	.	.
scaffold1017	subtractBed	intrn	524055	524151	.	-	.	Parent=CGI_10025014;
	scaffold1017	TRF	Tandem_Repeat	524055	524151	81	+	.	.
scaffold1017	subtractBed	intrn	538972	538973	.	+	.	Parent=CGI_10025015;
	scaffold1017	WUBlastX	LTR_Pao	538845	538973	78	+	.	.
scaffold1017	subtractBed	intrn	539864	539864	.	+	.	Parent=CGI_10025015;
	scaffold1017	WUBlastX	LTR_Pao	539864	539989	55	+	.	.
scaffold1017	subtractBed	intrn	550525	550579	.	+	.	Parent=CGI_10025016;
	scaffold1017	TRF	Tandem_Repeat	550525	550579	110	+	.	.
scaffold1017	subtractBed	intrn	591981	592009	.	+	.	Parent=CGI_10025018;
	scaffold1017	TRF	Tandem_Repeat	591981	592009	58	+	.	.
scaffold1017	subtractBed	intrn	616435	616490	.	+	.	Parent=CGI_10025019;
	scaffold1017	TRF	Tandem_Repeat	616435	616490	103	+	.	.
scaffold1017	subtractBed	intrn	651136	651181	.	+	.	Parent=CGI_10025022;
	scaffold1017	TRF	Tandem_Repeat	651136	651181	92	+	.	.
scaffold1017	subtractBed	intrn	651811	651840	.	+	.	Parent=CGI_10025022;
	scaffold1017	TRF	Tandem_Repeat	651811	651840	60	+	.	.
scaffold1017	subtractBed	intrn	756752	757353	.	-	.	Parent=CGI_10025025;
	scaffold1017	TRF	Tandem_Repeat	756752	757353	692	+	.	.
scaffold1017	subtractBed	intrn	756752	757353	.	-	.	Parent=CGI_10025025;
	scaffold1017	TRF	Tandem_Repeat	756752	757353	814	+	.	.
scaffold1017	subtractBed	intrn	763714	763764	.	-	.	Parent=CGI_10025025;
	scaffold1017	TRF	Tandem_Repeat	763714	763764	95	+	.	.
scaffold1017	subtractBed	intrn	819284	819422	.	-	.	Parent=CGI_10025030;
	scaffold1017	TRF	Tandem_Repeat	819284	819430	167	+	.	.
scaffold1017	subtractBed	intrn	820260	821043	.	-	.	Parent=CGI_10025030;
	scaffold1017	TRF	Tandem_Repeat	820248	821043	1145	+	.	.
scaffold1017	subtractBed	intrn	820260	821043	.	-	.	Parent=CGI_10025030;
	scaffold1017	TRF	Tandem_Repeat	820248	821043	1152	+	.	.
scaffold1017	subtractBed	intrn	820260	821043	.	-	.	Parent=CGI_10025030;
	scaffold1017	TRF	Tandem_Repeat	820248	821043	1150	+	.	.
scaffold1017	subtractBed	intrn	822424	822599	.	-	.	Parent=CGI_10025030;
	scaffold1017	TRF	Tandem_Repeat	822424	822599	271	+	.	.
scaffold1017	subtractBed	intrn	846489	846815	.	+	.	Parent=CGI_10025032;
	scaffold1017	TRF	Tandem_Repeat	846489	846815	370	+	.	.
scaffold1017	subtractBed	intrn	934009	935092	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	934009	935092	907	+	.	.
scaffold1017	subtractBed	intrn	933970	935070	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	933966	935070	507	+	.	.
scaffold1017	subtractBed	intrn	934303	935092	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	934303	935092	823	+	.	.
scaffold1017	subtractBed	intrn	934073	935092	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	934073	935092	772	+	.	.
scaffold1017	subtractBed	intrn	937515	937547	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	937515	937547	66	+	.	.
scaffold1017	subtractBed	intrn	941875	942138	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	941875	942138	476	+	.	.
scaffold1017	subtractBed	intrn	953743	954326	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	953721	954326	737	+	.	.
scaffold1017	subtractBed	intrn	967391	967446	.	+	.	Parent=CGI_10025034;
	scaffold1017	TRF	Tandem_Repeat	967391	967446	94	+	.	.
scaffold1017	subtractBed	intrn	1001891	1001946	.	+	.	Parent=CGI_10025035;
	scaffold1017	TRF	Tandem_Repeat	1001891	1001946	112	+	.	.
scaffold1018	subtractBed	intrn	142158	142317	.	-	.	Parent=CGI_10019756;
	scaffold1018	TRF	Tandem_Repeat	142158	142317	320	+	.	.
scaffold1018	subtractBed	intrn	144385	144970	.	-	.	Parent=CGI_10019756;
	scaffold1018	TRF	Tandem_Repeat	144385	144970	839	+	.	.
scaffold1018	subtractBed	intrn	144385	144956	.	-	.	Parent=CGI_10019756;
	scaffold1018	TRF	Tandem_Repeat	144385	144956	744	+	.	.
scaffold1018	subtractBed	intrn	154187	154709	.	+	.	Parent=CGI_10019757;
	scaffold1018	TRF	Tandem_Repeat	154182	154709	873	+	.	.
scaffold1018	subtractBed	intrn	157758	157986	.	+	.	Parent=CGI_10019757;
	scaffold1018	TRF	Tandem_Repeat	157741	157986	219	+	.	.
scaffold1018	subtractBed	intrn	177688	177747	.	-	.	Parent=CGI_10019759;
	scaffold1018	TRF	Tandem_Repeat	177688	177747	52	+	.	.
scaffold1018	subtractBed	intrn	191919	191956	.	+	.	Parent=CGI_10019760;
	scaffold1018	TRF	Tandem_Repeat	191919	191956	60	+	.	.
scaffold1018	subtractBed	intrn	263308	263348	.	+	.	Parent=CGI_10019762;
	scaffold1018	TRF	Tandem_Repeat	263308	263348	82	+	.	.
scaffold1018	subtractBed	intrn	262539	262754	.	+	.	Parent=CGI_10019762;
	scaffold1018	WUBlastX	LINE_RTE-X	262539	262754	23	-	.	.
scaffold1018	subtractBed	intrn	262406	262579	.	+	.	Parent=CGI_10019762;
	scaffold1018	WUBlastX	LINE_RTE-X	262406	262579	58	-	.	.
scaffold1018	subtractBed	intrn	262557	262676	.	+	.	Parent=CGI_10019762;
	scaffold1018	WUBlastX	LINE_RTE-X	262557	262676	56	-	.	.
scaffold1018	subtractBed	intrn	262409	262504	.	+	.	Parent=CGI_10019762;
	scaffold1018	WUBlastX	LINE_RTE-X	262409	262504	62	-	.	.
scaffold1018	subtractBed	intrn	310916	310962	.	-	.	Parent=CGI_10019766;
	scaffold1018	TRF	Tandem_Repeat	310916	310962	94	+	.	.
scaffold1018	subtractBed	intrn	332526	332560	.	-	.	Parent=CGI_10019766;
	scaffold1018	WUBlastX	DNA_MuDR	332526	333356	47	-	.	.
scaffold1018	subtractBed	intrn	439001	439888	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	DNA_En-Spm	439001	439888	296	+	.	.
scaffold1018	subtractBed	intrn	439878	440300	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	DNA_En-Spm	439878	440300	126	+	.	.
scaffold1018	subtractBed	intrn	439878	440483	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	DNA_En-Spm	439878	440483	96	+	.	.
scaffold1018	subtractBed	intrn	441697	441868	.	+	.	Parent=CGI_10019772;
	scaffold1018	TRF	Tandem_Repeat	441697	441868	263	+	.	.
scaffold1018	subtractBed	intrn	442052	442276	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	LTR_Ngaro	442052	442276	118	+	.	.
scaffold1018	subtractBed	intrn	442052	442462	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	LTR_Ngaro	442052	442462	75	+	.	.
scaffold1018	subtractBed	intrn	443086	443117	.	+	.	Parent=CGI_10019772;
	scaffold1018	TRF	Tandem_Repeat	443086	443117	55	+	.	.
scaffold1018	subtractBed	intrn	443833	444126	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	DNA_hAT-Tip100	443833	444126	83	+	.	.
scaffold1018	subtractBed	intrn	445683	446478	.	+	.	Parent=CGI_10019772;
	scaffold1018	TRF	Tandem_Repeat	445683	446478	1161	+	.	.
scaffold1018	subtractBed	intrn	445238	445474	.	+	.	Parent=CGI_10019772;
	scaffold1018	WUBlastX	DNA_hAT-Tip100	445238	445474	109	+	.	.
scaffold1018	subtractBed	intrn	439001	439888	.	-	.	Parent=CGI_10019773;
	scaffold1018	WUBlastX	DNA_En-Spm	439001	439888	296	+	.	.
scaffold1018	subtractBed	intrn	439878	440300	.	-	.	Parent=CGI_10019773;
	scaffold1018	WUBlastX	DNA_En-Spm	439878	440300	126	+	.	.
scaffold1018	subtractBed	intrn	439878	440483	.	-	.	Parent=CGI_10019773;
	scaffold1018	WUBlastX	DNA_En-Spm	439878	440483	96	+	.	.
scaffold1018	subtractBed	intrn	441697	441868	.	-	.	Parent=CGI_10019773;
	scaffold1018	TRF	Tandem_Repeat	441697	441868	263	+	.	.
scaffold1018	subtractBed	intrn	442052	442276	.	-	.	Parent=CGI_10019773;
	scaffold1018	WUBlastX	LTR_Ngaro	442052	442276	118	+	.	.
scaffold1018	subtractBed	intrn	442052	442462	.	-	.	Parent=CGI_10019773;
	scaffold1018	WUBlastX	LTR_Ngaro	442052	442462	75	+	.	.
scaffold1018	subtractBed	intrn	552694	552906	.	+	.	Parent=CGI_10019779;
	scaffold1018	WUBlastX	LTR_Gypsy	552694	552906	30	-	.	.
scaffold1018	subtractBed	intrn	551500	552525	.	+	.	Parent=CGI_10019779;
	scaffold1018	WUBlastX	LTR_Gypsy	551500	552525	250	-	.	.
scaffold1018	subtractBed	intrn	551251	552066	.	+	.	Parent=CGI_10019779;
	scaffold1018	WUBlastX	LTR_Gypsy	551251	552066	112	-	.	.
scaffold1018	subtractBed	intrn	551479	552228	.	+	.	Parent=CGI_10019779;
	scaffold1018	WUBlastX	LTR_Gypsy	551479	552228	279	-	.	.
scaffold1018	subtractBed	intrn	550483	550596	.	+	.	Parent=CGI_10019779;
	scaffold1018	WUBlastX	LTR_Gypsy	550483	550596	33	-	.	.
scaffold1018	subtractBed	intrn	559463	559487	.	+	.	Parent=CGI_10019779;
	scaffold1018	TRF	Tandem_Repeat	559463	559487	50	+	.	.
scaffold1018	subtractBed	intrn	571085	573070	.	-	.	Parent=CGI_10019780;
	scaffold1018	WUBlastX	LTR_Pao	571085	573070	216	+	.	.
scaffold1018	subtractBed	intrn	577984	578029	.	-	.	Parent=CGI_10019780;
	scaffold1018	TRF	Tandem_Repeat	577984	578029	56	+	.	.
scaffold1018	subtractBed	intrn	573031	577050	.	-	.	Parent=CGI_10019780;
	scaffold1018	WUBlastX	LTR_Pao	573031	577050	3264	+	.	.
scaffold1018	subtractBed	intrn	591839	592170	.	-	.	Parent=CGI_10019780;
	scaffold1018	TRF	Tandem_Repeat	591839	592170	461	+	.	.
scaffold102	subtractBed	intrn	112009	112052	.	+	.	Parent=CGI_10028421;
	scaffold102	TRF	Tandem_Repeat	112009	112052	88	+	.	.
scaffold102	subtractBed	intrn	119809	120024	.	+	.	Parent=CGI_10028421;
	scaffold102	TRF	Tandem_Repeat	119809	120024	317	+	.	.
scaffold102	subtractBed	intrn	124328	124438	.	+	.	Parent=CGI_10028421;
	scaffold102	TRF	Tandem_Repeat	124328	124438	160	+	.	.
scaffold102	subtractBed	intrn	180737	180774	.	-	.	Parent=CGI_10028425;
	scaffold102	TRF	Tandem_Repeat	180737	180774	62	+	.	.
scaffold102	subtractBed	intrn	242842	242897	.	+	.	Parent=CGI_10028428;
	scaffold102	TRF	Tandem_Repeat	242842	242897	112	+	.	.
scaffold102	subtractBed	intrn	257590	257889	.	-	.	Parent=CGI_10028430;
	scaffold102	WUBlastX	DNA_TcMar-Fot1	257590	257889	43	-	.	.
scaffold102	subtractBed	intrn	257608	257847	.	-	.	Parent=CGI_10028430;
	scaffold102	WUBlastX	DNA_TcMar-Tc2	257608	257847	47	-	.	.
scaffold102	subtractBed	intrn	257623	257802	.	-	.	Parent=CGI_10028430;
	scaffold102	WUBlastX	DNA_TcMar-Tc2	257623	257802	48	-	.	.
scaffold102	subtractBed	intrn	258065	258676	.	-	.	Parent=CGI_10028430;
	scaffold102	WUBlastX	DNA_TcMar-Tc2	258065	258676	77	-	.	.
scaffold102	subtractBed	intrn	276131	276386	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	276131	276386	105	+	.	.
scaffold102	subtractBed	intrn	280346	280533	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	280346	280533	94	+	.	.
scaffold102	subtractBed	intrn	280345	280564	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	280345	280564	246	+	.	.
scaffold102	subtractBed	intrn	280346	280564	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	280346	280564	83	+	.	.
scaffold102	subtractBed	intrn	280346	280564	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	280346	280564	58	+	.	.
scaffold102	subtractBed	intrn	281124	281185	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	281124	281185	72	+	.	.
scaffold102	subtractBed	intrn	281124	281221	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	281124	281221	63	+	.	.
scaffold102	subtractBed	intrn	281893	281940	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	281893	281940	51	+	.	.
scaffold102	subtractBed	intrn	286437	286570	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	286437	286570	110	+	.	.
scaffold102	subtractBed	intrn	300250	300410	.	-	.	Parent=CGI_10028431;
	scaffold102	TRF	Tandem_Repeat	300250	300410	97	+	.	.
scaffold102	subtractBed	intrn	307554	307596	.	-	.	Parent=CGI_10028432;
	scaffold102	TRF	Tandem_Repeat	307554	307596	59	+	.	.
scaffold102	subtractBed	intrn	308196	308538	.	-	.	Parent=CGI_10028432;
	scaffold102	TRF	Tandem_Repeat	308196	308538	332	+	.	.
scaffold102	subtractBed	intrn	388766	388974	.	-	.	Parent=CGI_10028435;
	scaffold102	TRF	Tandem_Repeat	388766	389002	287	+	.	.
scaffold102	subtractBed	intrn	448571	448619	.	+	.	Parent=CGI_10028437;
	scaffold102	TRF	Tandem_Repeat	448571	448619	98	+	.	.
scaffold102	subtractBed	intrn	503466	504240	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	503466	504240	891	+	.	.
scaffold102	subtractBed	intrn	504271	504310	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	504271	504310	71	+	.	.
scaffold102	subtractBed	intrn	511588	511718	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	511588	511718	190	+	.	.
scaffold102	subtractBed	intrn	512839	512865	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	512839	512865	54	+	.	.
scaffold102	subtractBed	intrn	517819	517986	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	517819	517986	178	+	.	.
scaffold102	subtractBed	intrn	517819	518287	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	517819	518287	410	+	.	.
scaffold102	subtractBed	intrn	517816	518280	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	517816	518280	434	+	.	.
scaffold102	subtractBed	intrn	517994	518287	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	517994	518287	260	+	.	.
scaffold102	subtractBed	intrn	522611	522640	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	522611	522640	60	+	.	.
scaffold102	subtractBed	intrn	524517	524600	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	524517	524600	96	+	.	.
scaffold102	subtractBed	intrn	528646	528685	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	528646	528685	64	+	.	.
scaffold102	subtractBed	intrn	533438	533463	.	-	.	Parent=CGI_10028439;
	scaffold102	TRF	Tandem_Repeat	533438	533463	52	+	.	.
scaffold102	subtractBed	intrn	560147	560337	.	+	.	Parent=CGI_10028440;
	scaffold102	TRF	Tandem_Repeat	560131	560337	274	+	.	.
scaffold102	subtractBed	intrn	622844	622984	.	+	.	Parent=CGI_10028443;
	scaffold102	TRF	Tandem_Repeat	622844	622984	117	+	.	.
scaffold102	subtractBed	intrn	623556	623584	.	+	.	Parent=CGI_10028443;
	scaffold102	TRF	Tandem_Repeat	623556	623584	58	+	.	.
scaffold102	subtractBed	intrn	653090	653115	.	+	.	Parent=CGI_10028445;
	scaffold102	TRF	Tandem_Repeat	653090	653115	52	+	.	.
scaffold102	subtractBed	intrn	644449	644808	.	+	.	Parent=CGI_10028445;
	scaffold102	WUBlastX	LTR_Ngaro	644449	644808	212	+	.	.
scaffold102	subtractBed	intrn	644778	645155	.	+	.	Parent=CGI_10028445;
	scaffold102	WUBlastX	LTR_Ngaro	644778	645155	94	+	.	.
scaffold102	subtractBed	intrn	644393	644446	.	+	.	Parent=CGI_10028445;
	scaffold102	WUBlastX	LTR_Ngaro	644393	644446	24	+	.	.
scaffold102	subtractBed	intrn	661017	661070	.	+	.	Parent=CGI_10028445;
	scaffold102	TRF	Tandem_Repeat	661017	661070	72	+	.	.
scaffold102	subtractBed	intrn	661056	661120	.	+	.	Parent=CGI_10028445;
	scaffold102	TRF	Tandem_Repeat	661056	661120	103	+	.	.
scaffold102	subtractBed	intrn	661017	661120	.	+	.	Parent=CGI_10028445;
	scaffold102	TRF	Tandem_Repeat	661017	661120	91	+	.	.
scaffold102	subtractBed	intrn	713371	714630	.	+	.	Parent=CGI_10028447;
	scaffold102	WUBlastX	LTR_Pao	713371	714630	130	+	.	.
scaffold102	subtractBed	intrn	714623	714823	.	+	.	Parent=CGI_10028447;
	scaffold102	WUBlastX	LTR_Pao	714623	714823	72	+	.	.
scaffold102	subtractBed	intrn	810023	810047	.	-	.	Parent=CGI_10028449;
	scaffold102	TRF	Tandem_Repeat	810023	810047	50	+	.	.
scaffold102	subtractBed	intrn	814735	814781	.	-	.	Parent=CGI_10028449;
	scaffold102	TRF	Tandem_Repeat	814735	814781	94	+	.	.
scaffold102	subtractBed	intrn	815596	815702	.	-	.	Parent=CGI_10028449;
	scaffold102	TRF	Tandem_Repeat	815596	815702	169	+	.	.
scaffold102	subtractBed	intrn	818565	818607	.	-	.	Parent=CGI_10028449;
	scaffold102	TRF	Tandem_Repeat	818565	818607	54	+	.	.
scaffold102	subtractBed	intrn	859006	859089	.	-	.	Parent=CGI_10028455;
	scaffold102	TRF	Tandem_Repeat	859006	859089	168	+	.	.
scaffold102	subtractBed	intrn	859457	859550	.	-	.	Parent=CGI_10028455;
	scaffold102	TRF	Tandem_Repeat	859457	859550	109	+	.	.
scaffold102	subtractBed	intrn	859743	859874	.	-	.	Parent=CGI_10028455;
	scaffold102	TRF	Tandem_Repeat	859743	859874	131	+	.	.
scaffold102	subtractBed	intrn	859951	860042	.	-	.	Parent=CGI_10028455;
	scaffold102	TRF	Tandem_Repeat	859951	860042	112	+	.	.
scaffold102	subtractBed	intrn	862758	862792	.	-	.	Parent=CGI_10028455;
	scaffold102	TRF	Tandem_Repeat	862758	862792	70	+	.	.
scaffold102	subtractBed	intrn	876763	876818	.	-	.	Parent=CGI_10028456;
	scaffold102	TRF	Tandem_Repeat	876763	876818	112	+	.	.
scaffold102	subtractBed	intrn	876830	876867	.	-	.	Parent=CGI_10028456;
	scaffold102	TRF	Tandem_Repeat	876830	876867	76	+	.	.
scaffold102	subtractBed	intrn	900336	900422	.	-	.	Parent=CGI_10028456;
	scaffold102	TRF	Tandem_Repeat	900336	900422	70	+	.	.
scaffold102	subtractBed	intrn	900517	900626	.	-	.	Parent=CGI_10028456;
	scaffold102	TRF	Tandem_Repeat	900517	900626	96	+	.	.
scaffold102	subtractBed	intrn	900697	900862	.	-	.	Parent=CGI_10028456;
	scaffold102	TRF	Tandem_Repeat	900697	900862	197	+	.	.
scaffold102	subtractBed	intrn	917939	917984	.	-	.	Parent=CGI_10028457;
	scaffold102	TRF	Tandem_Repeat	917939	917984	60	+	.	.
scaffold102	subtractBed	intrn	936720	936775	.	-	.	Parent=CGI_10028458;
	scaffold102	TRF	Tandem_Repeat	936720	936775	60	+	.	.
scaffold102	subtractBed	intrn	937061	937175	.	-	.	Parent=CGI_10028458;
	scaffold102	TRF	Tandem_Repeat	937061	937175	85	+	.	.
scaffold102	subtractBed	intrn	968673	968706	.	-	.	Parent=CGI_10028460;
	scaffold102	TRF	Tandem_Repeat	968673	968706	59	+	.	.
scaffold102	subtractBed	intrn	971367	971495	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-X	971367	971495	69	-	.	.
scaffold102	subtractBed	intrn	971349	971549	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-X	971349	971549	27	-	.	.
scaffold102	subtractBed	intrn	970888	971283	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-X	970888	971283	74	-	.	.
scaffold102	subtractBed	intrn	971289	971501	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-X	971289	971501	50	-	.	.
scaffold102	subtractBed	intrn	971394	971495	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-X	971394	971495	73	-	.	.
scaffold102	subtractBed	intrn	981958	982000	.	-	.	Parent=CGI_10028460;
	scaffold102	TRF	Tandem_Repeat	981958	982000	86	+	.	.
scaffold102	subtractBed	intrn	986202	986226	.	-	.	Parent=CGI_10028460;
	scaffold102	TRF	Tandem_Repeat	986202	986226	50	+	.	.
scaffold102	subtractBed	intrn	984298	984411	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-BovB	984298	984411	42	+	.	.
scaffold102	subtractBed	intrn	984700	985005	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-BovB	984700	985005	171	+	.	.
scaffold102	subtractBed	intrn	984589	985008	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-BovB	984589	985008	72	+	.	.
scaffold102	subtractBed	intrn	984697	985278	.	-	.	Parent=CGI_10028460;
	scaffold102	WUBlastX	LINE_RTE-BovB	984697	985278	131	+	.	.
scaffold102	subtractBed	intrn	993135	993169	.	-	.	Parent=CGI_10028460;
	scaffold102	TRF	Tandem_Repeat	993135	993169	70	+	.	.
scaffold102	subtractBed	intrn	1020765	1020999	.	+	.	Parent=CGI_10028461;
	scaffold102	TRF	Tandem_Repeat	1020765	1020999	373	+	.	.
scaffold102	subtractBed	intrn	1020797	1020997	.	+	.	Parent=CGI_10028461;
	scaffold102	TRF	Tandem_Repeat	1020797	1020997	103	+	.	.
scaffold102	subtractBed	intrn	1096574	1096581	.	+	.	Parent=CGI_10028470;
	scaffold102	WUBlastX	LTR_Gypsy	1096574	1096699	35	+	.	.
scaffold102	subtractBed	intrn	1096115	1096169	.	+	.	Parent=CGI_10028470;
	scaffold102	WUBlastX	LTR_Gypsy	1095900	1096169	66	+	.	.
scaffold102	subtractBed	intrn	1097850	1097899	.	+	.	Parent=CGI_10028470;
	scaffold102	TRF	Tandem_Repeat	1097850	1097899	66	+	.	.
scaffold102	subtractBed	intrn	1099900	1100980	.	+	.	Parent=CGI_10028470;
	scaffold102	TRF	Tandem_Repeat	1099900	1100980	1304	+	.	.
scaffold102	subtractBed	intrn	1123144	1124696	.	+	.	Parent=CGI_10028472;
	scaffold102	TRF	Tandem_Repeat	1123144	1124696	449	+	.	.
scaffold102	subtractBed	intrn	1149339	1149926	.	-	.	Parent=CGI_10028474;
	scaffold102	WUBlastX	LINE_R2-Hero	1149339	1149926	256	-	.	.
scaffold102	subtractBed	intrn	1149148	1149339	.	-	.	Parent=CGI_10028474;
	scaffold102	WUBlastX	LINE_R2-Hero	1149148	1149339	71	-	.	.
scaffold102	subtractBed	intrn	1183812	1183864	.	+	.	Parent=CGI_10028480;
	scaffold102	TRF	Tandem_Repeat	1183812	1183864	106	+	.	.
scaffold102	subtractBed	intrn	1262293	1262347	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1262293	1262347	83	+	.	.
scaffold102	subtractBed	intrn	1263671	1263737	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1263671	1263737	89	+	.	.
scaffold102	subtractBed	intrn	1264232	1264275	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1264232	1264275	88	+	.	.
scaffold102	subtractBed	intrn	1264273	1264302	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1264273	1264302	60	+	.	.
scaffold102	subtractBed	intrn	1264481	1264526	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1264481	1264526	83	+	.	.
scaffold102	subtractBed	intrn	1266578	1266644	.	-	.	Parent=CGI_10028487;
	scaffold102	TRF	Tandem_Repeat	1266578	1266644	89	+	.	.
scaffold102	subtractBed	intrn	1273723	1274173	.	-	.	Parent=CGI_10028488;
	scaffold102	TRF	Tandem_Repeat	1273723	1274173	717	+	.	.
scaffold102	subtractBed	intrn	1275063	1275088	.	-	.	Parent=CGI_10028488;
	scaffold102	TRF	Tandem_Repeat	1275063	1275088	52	+	.	.
scaffold102	subtractBed	intrn	1279126	1279314	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1279126	1279314	50	+	.	.
scaffold102	subtractBed	intrn	1278860	1279117	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1278860	1279117	104	+	.	.
scaffold102	subtractBed	intrn	1278896	1279102	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1278896	1279102	116	+	.	.
scaffold102	subtractBed	intrn	1280117	1280311	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1280117	1280311	34	+	.	.
scaffold102	subtractBed	intrn	1279856	1280041	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	DNA_Harbinger	1279856	1280041	116	+	.	.
scaffold102	subtractBed	intrn	1280382	1280534	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1280382	1280534	28	+	.	.
scaffold102	subtractBed	intrn	1279108	1279497	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1279108	1279497	39	+	.	.
scaffold102	subtractBed	intrn	1279108	1279260	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1279108	1279260	115	+	.	.
scaffold102	subtractBed	intrn	1279275	1279418	.	-	.	Parent=CGI_10028488;
	scaffold102	WUBlastX	LINE_RTE-BovB	1279275	1279418	45	+	.	.
scaffold102	subtractBed	intrn	1286553	1286829	.	+	.	Parent=CGI_10028489;
	scaffold102	TRF	Tandem_Repeat	1286553	1286829	315	+	.	.
scaffold102	subtractBed	intrn	1288290	1288336	.	+	.	Parent=CGI_10028489;
	scaffold102	TRF	Tandem_Repeat	1288290	1288336	94	+	.	.
scaffold102	subtractBed	intrn	1298207	1298505	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1298207	1298505	285	+	.	.
scaffold102	subtractBed	intrn	1298619	1298905	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1298619	1298905	324	+	.	.
scaffold102	subtractBed	intrn	1298685	1298856	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1298685	1298856	111	+	.	.
scaffold102	subtractBed	intrn	1299107	1299170	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1299107	1299170	119	+	.	.
scaffold102	subtractBed	intrn	1300999	1301137	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1300999	1301137	226	+	.	.
scaffold102	subtractBed	intrn	1305084	1305112	.	-	.	Parent=CGI_10028491;
	scaffold102	TRF	Tandem_Repeat	1305084	1305112	58	+	.	.
scaffold102	subtractBed	intrn	1305084	1305112	.	+	.	Parent=CGI_10028492;
	scaffold102	TRF	Tandem_Repeat	1305084	1305112	58	+	.	.
scaffold102	subtractBed	intrn	1349720	1349775	.	+	.	Parent=CGI_10028495;
	scaffold102	TRF	Tandem_Repeat	1349720	1349775	76	+	.	.
scaffold102	subtractBed	intrn	1352593	1352651	.	+	.	Parent=CGI_10028495;
	scaffold102	TRF	Tandem_Repeat	1352593	1352651	118	+	.	.
scaffold102	subtractBed	intrn	1354904	1354950	.	+	.	Parent=CGI_10028495;
	scaffold102	TRF	Tandem_Repeat	1354904	1354950	58	+	.	.
scaffold102	subtractBed	intrn	1354905	1354950	.	+	.	Parent=CGI_10028495;
	scaffold102	TRF	Tandem_Repeat	1354905	1354950	65	+	.	.
scaffold102	subtractBed	intrn	1397068	1397119	.	+	.	Parent=CGI_10028497;
	scaffold102	TRF	Tandem_Repeat	1397068	1397119	104	+	.	.
scaffold102	subtractBed	intrn	1462342	1462394	.	+	.	Parent=CGI_10028500;
	scaffold102	TRF	Tandem_Repeat	1462342	1462394	88	+	.	.
scaffold102	subtractBed	intrn	1463912	1463936	.	+	.	Parent=CGI_10028500;
	scaffold102	TRF	Tandem_Repeat	1463912	1463936	50	+	.	.
scaffold102	subtractBed	intrn	1518795	1519418	.	+	.	Parent=CGI_10028504;
	scaffold102	TRF	Tandem_Repeat	1518795	1519418	809	+	.	.
scaffold102	subtractBed	intrn	1518795	1519693	.	+	.	Parent=CGI_10028504;
	scaffold102	TRF	Tandem_Repeat	1518795	1519693	959	+	.	.
scaffold102	subtractBed	intrn	1519427	1519693	.	+	.	Parent=CGI_10028504;
	scaffold102	TRF	Tandem_Repeat	1519427	1519693	296	+	.	.
scaffold102	subtractBed	intrn	1538400	1538654	.	-	.	Parent=CGI_10028505;
	scaffold102	WUBlastX	DNA_hAT-Ac	1538400	1538654	70	-	.	.
scaffold102	subtractBed	intrn	1538274	1538573	.	-	.	Parent=CGI_10028505;
	scaffold102	WUBlastX	DNA_hAT-Ac	1538274	1538573	64	-	.	.
scaffold102	subtractBed	intrn	1538379	1538609	.	-	.	Parent=CGI_10028505;
	scaffold102	WUBlastX	DNA_hAT-Ac	1538379	1538609	81	-	.	.
scaffold102	subtractBed	intrn	1538666	1538815	.	-	.	Parent=CGI_10028505;
	scaffold102	WUBlastX	DNA_hAT	1538666	1538815	55	-	.	.
scaffold102	subtractBed	intrn	1539634	1539864	.	-	.	Parent=CGI_10028505;
	scaffold102	TRF	Tandem_Repeat	1539634	1539864	333	+	.	.
scaffold102	subtractBed	intrn	1651871	1651916	.	+	.	Parent=CGI_10028511;
	scaffold102	TRF	Tandem_Repeat	1651871	1651916	92	+	.	.
scaffold102	subtractBed	intrn	1656304	1656643	.	+	.	Parent=CGI_10028511;
	scaffold102	TRF	Tandem_Repeat	1656304	1656643	419	+	.	.
scaffold102	subtractBed	intrn	1658444	1658490	.	+	.	Parent=CGI_10028511;
	scaffold102	TRF	Tandem_Repeat	1658444	1658490	94	+	.	.
scaffold102	subtractBed	intrn	1666774	1668126	.	+	.	Parent=CGI_10028512;
	scaffold102	TRF	Tandem_Repeat	1666774	1668126	1726	+	.	.
scaffold102	subtractBed	intrn	1666791	1668126	.	+	.	Parent=CGI_10028512;
	scaffold102	TRF	Tandem_Repeat	1666791	1668126	1969	+	.	.
scaffold102	subtractBed	intrn	1666774	1668126	.	+	.	Parent=CGI_10028512;
	scaffold102	TRF	Tandem_Repeat	1666774	1668126	1975	+	.	.
scaffold102	subtractBed	intrn	1668678	1668908	.	+	.	Parent=CGI_10028512;
	scaffold102	TRF	Tandem_Repeat	1668678	1668908	372	+	.	.
scaffold102	subtractBed	intrn	1669115	1669184	.	+	.	Parent=CGI_10028512;
	scaffold102	TRF	Tandem_Repeat	1669115	1669184	95	+	.	.
scaffold102	subtractBed	intrn	1675411	1675457	.	+	.	Parent=CGI_10028513;
	scaffold102	TRF	Tandem_Repeat	1675411	1675457	94	+	.	.
scaffold102	subtractBed	intrn	1679140	1679571	.	+	.	Parent=CGI_10028513;
	scaffold102	TRF	Tandem_Repeat	1679100	1679571	597	+	.	.
scaffold102	subtractBed	intrn	1679140	1679571	.	+	.	Parent=CGI_10028513;
	scaffold102	TRF	Tandem_Repeat	1679100	1679571	701	+	.	.
scaffold102	subtractBed	intrn	1683939	1683982	.	-	.	Parent=CGI_10028514;
	scaffold102	TRF	Tandem_Repeat	1683939	1683982	88	+	.	.
scaffold102	subtractBed	intrn	1688674	1688718	.	-	.	Parent=CGI_10028514;
	scaffold102	TRF	Tandem_Repeat	1688674	1688718	90	+	.	.
scaffold1020	subtractBed	intrn	10828	10828	.	+	.	Parent=CGI_10012847;
	scaffold1020	WUBlastX	DNA_IS4EU	10748	10828	20	+	.	.
scaffold1020	subtractBed	intrn	11337	11350	.	+	.	Parent=CGI_10012847;
	scaffold1020	WUBlastX	DNA_P	11337	11453	53	+	.	.
scaffold1020	subtractBed	intrn	11334	11350	.	+	.	Parent=CGI_10012847;
	scaffold1020	WUBlastX	DNA_P	11334	11606	48	+	.	.
scaffold1020	subtractBed	intrn	164569	164610	.	-	.	Parent=CGI_10012852;
	scaffold1020	TRF	Tandem_Repeat	164569	164610	84	+	.	.
scaffold1020	subtractBed	intrn	174979	175119	.	-	.	Parent=CGI_10012854;
	scaffold1020	TRF	Tandem_Repeat	174979	175119	228	+	.	.
scaffold1020	subtractBed	intrn	197240	197890	.	-	.	Parent=CGI_10012855;
	scaffold1020	WUBlastX	LINE_L2	197240	197890	280	-	.	.
scaffold1020	subtractBed	intrn	197591	197992	.	-	.	Parent=CGI_10012855;
	scaffold1020	WUBlastX	LINE_L2	197591	197992	68	-	.	.
scaffold1020	subtractBed	intrn	202299	202379	.	-	.	Parent=CGI_10012855;
	scaffold1020	TRF	Tandem_Repeat	202299	202379	108	+	.	.
scaffold1020	subtractBed	intrn	202396	202422	.	-	.	Parent=CGI_10012855;
	scaffold1020	WUBlastX	DNA_IS4EU	202396	202974	91	-	.	.
scaffold1020	subtractBed	intrn	202771	202974	.	-	.	Parent=CGI_10012855;
	scaffold1020	WUBlastX	DNA_IS4EU	202396	202974	91	-	.	.
scaffold1020	subtractBed	intrn	211154	211253	.	-	.	Parent=CGI_10012856;
	scaffold1020	TRF	Tandem_Repeat	211154	211253	200	+	.	.
scaffold1020	subtractBed	intrn	218206	218249	.	-	.	Parent=CGI_10012856;
	scaffold1020	TRF	Tandem_Repeat	218206	218249	79	+	.	.
scaffold1020	subtractBed	intrn	286369	286791	.	+	.	Parent=CGI_10012858;
	scaffold1020	WUBlastX	LINE_RTE-X	286369	286791	112	+	.	.
scaffold1020	subtractBed	intrn	319833	319880	.	-	.	Parent=CGI_10012861;
	scaffold1020	TRF	Tandem_Repeat	319833	319880	78	+	.	.
scaffold1021	subtractBed	intrn	51314	51379	.	-	.	Parent=CGI_10022481;
	scaffold1021	TRF	Tandem_Repeat	51314	51379	123	+	.	.
scaffold1021	subtractBed	intrn	90661	91610	.	-	.	Parent=CGI_10022483;
	scaffold1021	TRF	Tandem_Repeat	90661	91610	1340	+	.	.
scaffold1021	subtractBed	intrn	91622	91664	.	-	.	Parent=CGI_10022483;
	scaffold1021	TRF	Tandem_Repeat	91622	91664	68	+	.	.
scaffold1021	subtractBed	intrn	91615	91666	.	-	.	Parent=CGI_10022483;
	scaffold1021	TRF	Tandem_Repeat	91615	91666	68	+	.	.
scaffold1021	subtractBed	intrn	106073	106117	.	+	.	Parent=CGI_10022484;
	scaffold1021	TRF	Tandem_Repeat	106073	106117	90	+	.	.
scaffold1021	subtractBed	intrn	103677	103769	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	103677	103769	26	+	.	.
scaffold1021	subtractBed	intrn	104739	104852	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	104739	104852	36	+	.	.
scaffold1021	subtractBed	intrn	104843	105007	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	104843	105007	46	+	.	.
scaffold1021	subtractBed	intrn	100986	101150	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	100986	101150	101	+	.	.
scaffold1021	subtractBed	intrn	101520	102215	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	101520	102215	272	+	.	.
scaffold1021	subtractBed	intrn	102301	102486	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	102301	102486	73	+	.	.
scaffold1021	subtractBed	intrn	102524	103147	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	102524	103147	168	+	.	.
scaffold1021	subtractBed	intrn	102220	102507	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	102220	102507	68	+	.	.
scaffold1021	subtractBed	intrn	102932	103225	.	+	.	Parent=CGI_10022484;
	scaffold1021	WUBlastX	LTR_DIRS	102932	103225	49	+	.	.
scaffold1021	subtractBed	intrn	128945	128988	.	+	.	Parent=CGI_10022484;
	scaffold1021	TRF	Tandem_Repeat	128945	128988	88	+	.	.
scaffold1021	subtractBed	intrn	139101	139150	.	+	.	Parent=CGI_10022485;
	scaffold1021	TRF	Tandem_Repeat	139101	139150	100	+	.	.
scaffold1021	subtractBed	intrn	260119	261034	.	-	.	Parent=CGI_10022488;
	scaffold1021	TRF	Tandem_Repeat	260119	261034	1287	+	.	.
scaffold1021	subtractBed	intrn	262055	262088	.	-	.	Parent=CGI_10022488;
	scaffold1021	TRF	Tandem_Repeat	262055	262088	50	+	.	.
scaffold1021	subtractBed	intrn	261352	261573	.	-	.	Parent=CGI_10022488;
	scaffold1021	WUBlastX	LINE_L1-Tx1	261352	261573	93	+	.	.
scaffold1021	subtractBed	intrn	360361	360408	.	-	.	Parent=CGI_10022491;
	scaffold1021	TRF	Tandem_Repeat	360361	360408	80	+	.	.
scaffold1021	subtractBed	intrn	384839	384887	.	-	.	Parent=CGI_10022494;
	scaffold1021	TRF	Tandem_Repeat	384839	384887	98	+	.	.
scaffold1021	subtractBed	intrn	385572	386252	.	-	.	Parent=CGI_10022494;
	scaffold1021	TRF	Tandem_Repeat	385572	386252	735	+	.	.
scaffold1021	subtractBed	intrn	388465	388503	.	-	.	Parent=CGI_10022494;
	scaffold1021	TRF	Tandem_Repeat	388465	388503	78	+	.	.
scaffold1021	subtractBed	intrn	388960	389340	.	-	.	Parent=CGI_10022494;
	scaffold1021	TRF	Tandem_Repeat	388960	389340	548	+	.	.
scaffold1021	subtractBed	intrn	388948	389340	.	-	.	Parent=CGI_10022494;
	scaffold1021	TRF	Tandem_Repeat	388948	389340	475	+	.	.
scaffold1021	subtractBed	intrn	407941	407995	.	-	.	Parent=CGI_10022496;
	scaffold1021	TRF	Tandem_Repeat	407941	407995	94	+	.	.
scaffold1021	subtractBed	intrn	408744	408918	.	-	.	Parent=CGI_10022496;
	scaffold1021	TRF	Tandem_Repeat	408744	408918	187	+	.	.
scaffold1021	subtractBed	intrn	456375	456431	.	-	.	Parent=CGI_10022500;
	scaffold1021	TRF	Tandem_Repeat	456375	456431	114	+	.	.
scaffold1021	subtractBed	intrn	456487	456513	.	-	.	Parent=CGI_10022500;
	scaffold1021	TRF	Tandem_Repeat	456487	456513	54	+	.	.
scaffold1021	subtractBed	intrn	456581	456639	.	-	.	Parent=CGI_10022500;
	scaffold1021	TRF	Tandem_Repeat	456581	456639	109	+	.	.
scaffold1021	subtractBed	intrn	457634	457808	.	-	.	Parent=CGI_10022500;
	scaffold1021	TRF	Tandem_Repeat	457634	457808	219	+	.	.
scaffold1021	subtractBed	intrn	455368	455853	.	-	.	Parent=CGI_10022500;
	scaffold1021	WUBlastX	LTR_Gypsy	455368	455853	28	-	.	.
scaffold1021	subtractBed	intrn	451946	453664	.	-	.	Parent=CGI_10022500;
	scaffold1021	WUBlastX	LINE_L1-Tx1	451946	453664	633	+	.	.
scaffold1021	subtractBed	intrn	451856	452254	.	-	.	Parent=CGI_10022500;
	scaffold1021	WUBlastX	LINE_CR1	451856	452254	51	+	.	.
scaffold1021	subtractBed	intrn	460686	460780	.	-	.	Parent=CGI_10022500;
	scaffold1021	TRF	Tandem_Repeat	460686	460780	147	+	.	.
scaffold1021	subtractBed	intrn	482224	482266	.	-	.	Parent=CGI_10022501;
	scaffold1021	TRF	Tandem_Repeat	482224	482266	54	+	.	.
scaffold1021	subtractBed	intrn	504586	504699	.	+	.	Parent=CGI_10022502;
	scaffold1021	TRF	Tandem_Repeat	504586	504699	86	+	.	.
scaffold1021	subtractBed	intrn	562631	562760	.	+	.	Parent=CGI_10022503;
	scaffold1021	TRF	Tandem_Repeat	562631	562760	98	+	.	.
scaffold1021	subtractBed	intrn	581251	581544	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	581251	581544	245	-	.	.
scaffold1021	subtractBed	intrn	581544	583004	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	581544	583004	1070	-	.	.
scaffold1021	subtractBed	intrn	582606	585029	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	582606	585029	1584	-	.	.
scaffold1021	subtractBed	intrn	586892	587539	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	586892	587539	20	-	.	.
scaffold1021	subtractBed	intrn	585552	586595	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	585552	586595	274	-	.	.
scaffold1021	subtractBed	intrn	586970	587278	.	-	.	Parent=CGI_10022504;
	scaffold1021	WUBlastX	LTR_Pao	586970	587278	24	-	.	.
scaffold1021	subtractBed	intrn	697145	697315	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	LINE_CR1	697145	697315	20	+	.	.
scaffold1021	subtractBed	intrn	692550	693317	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	692550	693317	295	+	.	.
scaffold1021	subtractBed	intrn	695388	695723	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	695388	695723	208	+	.	.
scaffold1021	subtractBed	intrn	695721	696686	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	695721	696686	433	+	.	.
scaffold1021	subtractBed	intrn	693370	694071	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	693370	694071	193	+	.	.
scaffold1021	subtractBed	intrn	694086	695504	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	694086	695504	553	+	.	.
scaffold1021	subtractBed	intrn	695949	696938	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	LINE_L2	695949	696938	70	+	.	.
scaffold1021	subtractBed	intrn	693481	694107	.	+	.	Parent=CGI_10022506;
	scaffold1021	WUBlastX	RC_Helitron	693481	694107	207	+	.	.
scaffold1024	subtractBed	intrn	1982	2029	.	-	.	Parent=CGI_10028517;
	scaffold1024	TRF	Tandem_Repeat	1982	2029	96	+	.	.
scaffold1024	subtractBed	intrn	7646	8072	.	-	.	Parent=CGI_10028517;
	scaffold1024	TRF	Tandem_Repeat	7646	8072	547	+	.	.
scaffold1024	subtractBed	intrn	18755	18802	.	-	.	Parent=CGI_10028517;
	scaffold1024	TRF	Tandem_Repeat	18755	18802	51	+	.	.
scaffold1024	subtractBed	intrn	20187	21821	.	-	.	Parent=CGI_10028517;
	scaffold1024	WUBlastX	LINE_CR1-L2	20187	22037	963	-	.	.
scaffold1024	subtractBed	intrn	32169	32202	.	-	.	Parent=CGI_10028518;
	scaffold1024	TRF	Tandem_Repeat	32169	32202	52	+	.	.
scaffold1024	subtractBed	intrn	33437	33500	.	-	.	Parent=CGI_10028518;
	scaffold1024	TRF	Tandem_Repeat	33437	33500	101	+	.	.
scaffold1024	subtractBed	intrn	33613	33656	.	-	.	Parent=CGI_10028518;
	scaffold1024	TRF	Tandem_Repeat	33613	33656	70	+	.	.
scaffold1024	subtractBed	intrn	33805	33853	.	-	.	Parent=CGI_10028518;
	scaffold1024	TRF	Tandem_Repeat	33805	33853	89	+	.	.
scaffold1024	subtractBed	intrn	71031	71579	.	+	.	Parent=CGI_10028519;
	scaffold1024	WUBlastX	LINE_Jockey	71031	71579	128	+	.	.
scaffold1024	subtractBed	intrn	71027	71029	.	+	.	Parent=CGI_10028519;
	scaffold1024	WUBlastX	LINE_CR1	70775	71029	195	+	.	.
scaffold1024	subtractBed	intrn	81368	81586	.	+	.	Parent=CGI_10028519;
	scaffold1024	WUBlastX	RC_Helitron	81368	81586	64	-	.	.
scaffold1024	subtractBed	intrn	71118	72401	.	+	.	Parent=CGI_10028519;
	scaffold1024	WUBlastX	LINE_CR1	71118	72401	1021	+	.	.
scaffold1024	subtractBed	intrn	90126	90173	.	-	.	Parent=CGI_10028520;
	scaffold1024	TRF	Tandem_Repeat	90126	90173	69	+	.	.
scaffold1024	subtractBed	intrn	97818	98165	.	-	.	Parent=CGI_10028520;
	scaffold1024	WUBlastX	DNA_Zator	97818	98165	135	+	.	.
scaffold1024	subtractBed	intrn	92033	92335	.	-	.	Parent=CGI_10028520;
	scaffold1024	WUBlastX	LTR_Gypsy	92033	92335	22	-	.	.
scaffold1024	subtractBed	intrn	97131	97394	.	-	.	Parent=CGI_10028520;
	scaffold1024	WUBlastX	DNA_Maverick	97131	97394	65	+	.	.
scaffold1024	subtractBed	intrn	192548	192607	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	192548	192607	111	+	.	.
scaffold1024	subtractBed	intrn	194525	195262	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	194525	195262	1086	+	.	.
scaffold1024	subtractBed	intrn	195473	195503	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	195473	195503	53	+	.	.
scaffold1024	subtractBed	intrn	206377	206519	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	206377	206519	214	+	.	.
scaffold1024	subtractBed	intrn	220100	220142	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	220100	220142	86	+	.	.
scaffold1024	subtractBed	intrn	222421	222519	.	+	.	Parent=CGI_10028528;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	222421	222519	34	-	.	.
scaffold1024	subtractBed	intrn	222436	222534	.	+	.	Parent=CGI_10028528;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	222436	222534	46	-	.	.
scaffold1024	subtractBed	intrn	223040	223327	.	+	.	Parent=CGI_10028528;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	223040	223327	97	-	.	.
scaffold1024	subtractBed	intrn	223160	223306	.	+	.	Parent=CGI_10028528;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	223160	223306	107	-	.	.
scaffold1024	subtractBed	intrn	223342	224070	.	+	.	Parent=CGI_10028528;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	223342	224070	133	-	.	.
scaffold1024	subtractBed	intrn	242336	242376	.	+	.	Parent=CGI_10028528;
	scaffold1024	TRF	Tandem_Repeat	242336	242376	82	+	.	.
scaffold1024	subtractBed	intrn	262911	263018	.	-	.	Parent=CGI_10028529;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	262911	263018	70	-	.	.
scaffold1024	subtractBed	intrn	262743	263018	.	-	.	Parent=CGI_10028529;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	262743	263018	59	-	.	.
scaffold1024	subtractBed	intrn	292205	292324	.	-	.	Parent=CGI_10028532;
	scaffold1024	TRF	Tandem_Repeat	292205	292324	65	+	.	.
scaffold1024	subtractBed	intrn	289749	289997	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	289749	289997	110	+	.	.
scaffold1024	subtractBed	intrn	293079	293225	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	293079	293225	26	-	.	.
scaffold1024	subtractBed	intrn	292995	293183	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	292995	293183	37	-	.	.
scaffold1024	subtractBed	intrn	293810	294013	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	293810	294013	62	-	.	.
scaffold1024	subtractBed	intrn	295830	296171	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	295830	296171	101	-	.	.
scaffold1024	subtractBed	intrn	295182	295469	.	-	.	Parent=CGI_10028532;
	scaffold1024	WUBlastX	DNA_Kolobok	295182	295469	71	-	.	.
scaffold1024	subtractBed	intrn	448652	448682	.	-	.	Parent=CGI_10028534;
	scaffold1024	TRF	Tandem_Repeat	448652	448682	62	+	.	.
scaffold1024	subtractBed	intrn	452366	452486	.	-	.	Parent=CGI_10028534;
	scaffold1024	TRF	Tandem_Repeat	452366	452486	118	+	.	.
scaffold1024	subtractBed	intrn	459871	459908	.	+	.	Parent=CGI_10028535;
	scaffold1024	TRF	Tandem_Repeat	459871	459908	53	+	.	.
scaffold1024	subtractBed	intrn	464602	464661	.	+	.	Parent=CGI_10028535;
	scaffold1024	TRF	Tandem_Repeat	464602	464661	63	+	.	.
scaffold1024	subtractBed	intrn	464692	465486	.	+	.	Parent=CGI_10028535;
	scaffold1024	TRF	Tandem_Repeat	464692	465486	1117	+	.	.
scaffold1024	subtractBed	intrn	473418	473448	.	+	.	Parent=CGI_10028535;
	scaffold1024	TRF	Tandem_Repeat	473418	473448	62	+	.	.
scaffold1024	subtractBed	intrn	487485	488184	.	+	.	Parent=CGI_10028535;
	scaffold1024	TRF	Tandem_Repeat	487485	488184	1025	+	.	.
scaffold1024	subtractBed	intrn	509782	509838	.	-	.	Parent=CGI_10028537;
	scaffold1024	TRF	Tandem_Repeat	509782	509838	114	+	.	.
scaffold1024	subtractBed	intrn	573302	573343	.	+	.	Parent=CGI_10028538;
	scaffold1024	TRF	Tandem_Repeat	573302	573343	84	+	.	.
scaffold1024	subtractBed	intrn	573301	573349	.	+	.	Parent=CGI_10028538;
	scaffold1024	TRF	Tandem_Repeat	573301	573349	66	+	.	.
scaffold1024	subtractBed	intrn	577225	577541	.	+	.	Parent=CGI_10028538;
	scaffold1024	TRF	Tandem_Repeat	577225	577541	431	+	.	.
scaffold1024	subtractBed	intrn	582140	582205	.	+	.	Parent=CGI_10028538;
	scaffold1024	TRF	Tandem_Repeat	582140	582205	125	+	.	.
scaffold1024	subtractBed	intrn	598051	598150	.	+	.	Parent=CGI_10028539;
	scaffold1024	TRF	Tandem_Repeat	598051	598150	193	+	.	.
scaffold1024	subtractBed	intrn	600020	600063	.	+	.	Parent=CGI_10028539;
	scaffold1024	TRF	Tandem_Repeat	600020	600063	88	+	.	.
scaffold1024	subtractBed	intrn	601482	601538	.	+	.	Parent=CGI_10028539;
	scaffold1024	TRF	Tandem_Repeat	601482	601538	96	+	.	.
scaffold1024	subtractBed	intrn	654958	654982	.	+	.	Parent=CGI_10028541;
	scaffold1024	TRF	Tandem_Repeat	654958	654982	50	+	.	.
scaffold1024	subtractBed	intrn	677793	677915	.	-	.	Parent=CGI_10028542;
	scaffold1024	WUBlastX	LTR_Gypsy	677793	677915	20	-	.	.
scaffold1024	subtractBed	intrn	736468	736651	.	-	.	Parent=CGI_10028545;
	scaffold1024	TRF	Tandem_Repeat	736468	736651	69	+	.	.
scaffold1024	subtractBed	intrn	736458	736912	.	-	.	Parent=CGI_10028545;
	scaffold1024	TRF	Tandem_Repeat	736458	736912	802	+	.	.
scaffold1024	subtractBed	intrn	819786	819810	.	-	.	Parent=CGI_10028548;
	scaffold1024	TRF	Tandem_Repeat	819786	819810	50	+	.	.
scaffold1024	subtractBed	intrn	849266	849297	.	+	.	Parent=CGI_10028549;
	scaffold1024	TRF	Tandem_Repeat	849266	849297	64	+	.	.
scaffold1024	subtractBed	intrn	851311	851780	.	+	.	Parent=CGI_10028549;
	scaffold1024	TRF	Tandem_Repeat	851311	851780	127	+	.	.
scaffold1024	subtractBed	intrn	851249	851760	.	+	.	Parent=CGI_10028549;
	scaffold1024	TRF	Tandem_Repeat	851249	851760	618	+	.	.
scaffold1024	subtractBed	intrn	852061	852090	.	+	.	Parent=CGI_10028549;
	scaffold1024	TRF	Tandem_Repeat	852061	852090	60	+	.	.
scaffold1024	subtractBed	intrn	851668	852007	.	+	.	Parent=CGI_10028549;
	scaffold1024	TRF	Tandem_Repeat	851668	852007	202	+	.	.
scaffold1024	subtractBed	intrn	869229	869285	.	+	.	Parent=CGI_10028551;
	scaffold1024	TRF	Tandem_Repeat	869229	869285	114	+	.	.
scaffold1024	subtractBed	intrn	919037	919088	.	-	.	Parent=CGI_10028553;
	scaffold1024	TRF	Tandem_Repeat	919037	919088	104	+	.	.
scaffold1024	subtractBed	intrn	987865	987916	.	-	.	Parent=CGI_10028555;
	scaffold1024	TRF	Tandem_Repeat	987865	987916	59	+	.	.
scaffold1024	subtractBed	intrn	987865	987916	.	-	.	Parent=CGI_10028555;
	scaffold1024	TRF	Tandem_Repeat	987865	987916	59	+	.	.
scaffold1024	subtractBed	intrn	987864	987907	.	-	.	Parent=CGI_10028555;
	scaffold1024	TRF	Tandem_Repeat	987864	987907	52	+	.	.
scaffold1024	subtractBed	intrn	991917	991957	.	-	.	Parent=CGI_10028555;
	scaffold1024	TRF	Tandem_Repeat	991917	991957	82	+	.	.
scaffold1024	subtractBed	intrn	990242	990862	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	990242	990862	150	+	.	.
scaffold1024	subtractBed	intrn	989733	989852	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	989733	989852	23	+	.	.
scaffold1024	subtractBed	intrn	990126	990341	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	990126	990341	55	+	.	.
scaffold1024	subtractBed	intrn	990852	991427	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	990852	991427	201	+	.	.
scaffold1024	subtractBed	intrn	989654	989707	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	989654	989707	20	+	.	.
scaffold1024	subtractBed	intrn	990326	990838	.	-	.	Parent=CGI_10028555;
	scaffold1024	WUBlastX	LTR_Gypsy	990326	990838	252	+	.	.
scaffold1024	subtractBed	intrn	1032558	1032642	.	+	.	Parent=CGI_10028556;
	scaffold1024	TRF	Tandem_Repeat	1032558	1032642	125	+	.	.
scaffold1024	subtractBed	intrn	1032687	1032720	.	+	.	Parent=CGI_10028556;
	scaffold1024	TRF	Tandem_Repeat	1032687	1032720	68	+	.	.
scaffold1024	subtractBed	intrn	1032840	1032900	.	+	.	Parent=CGI_10028556;
	scaffold1024	TRF	Tandem_Repeat	1032840	1032900	72	+	.	.
scaffold1024	subtractBed	intrn	1038722	1038748	.	-	.	Parent=CGI_10028557;
	scaffold1024	TRF	Tandem_Repeat	1038722	1038748	54	+	.	.
scaffold1024	subtractBed	intrn	1067771	1068895	.	-	.	Parent=CGI_10028562;
	scaffold1024	WUBlastX	DNA_PiggyBac	1067771	1068895	612	-	.	.
scaffold1024	subtractBed	intrn	1067771	1069135	.	-	.	Parent=CGI_10028562;
	scaffold1024	WUBlastX	DNA_PiggyBac	1067771	1069135	363	-	.	.
scaffold1024	subtractBed	intrn	1072075	1072109	.	-	.	Parent=CGI_10028563;
	scaffold1024	TRF	Tandem_Repeat	1072075	1072109	70	+	.	.
scaffold1024	subtractBed	intrn	1073333	1073525	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1073333	1073542	80	-	.	.
scaffold1024	subtractBed	intrn	1074859	1075104	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1074859	1075104	82	-	.	.
scaffold1024	subtractBed	intrn	1074662	1074892	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1074662	1074892	133	-	.	.
scaffold1024	subtractBed	intrn	1076105	1076257	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1076105	1076257	72	-	.	.
scaffold1024	subtractBed	intrn	1076144	1076266	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1076144	1076266	109	-	.	.
scaffold1024	subtractBed	intrn	1076265	1076507	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1076265	1076507	90	-	.	.
scaffold1024	subtractBed	intrn	1074626	1074850	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1074626	1074850	66	-	.	.
scaffold1024	subtractBed	intrn	1075420	1075530	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1075420	1075530	32	-	.	.
scaffold1024	subtractBed	intrn	1076280	1076549	.	-	.	Parent=CGI_10028563;
	scaffold1024	WUBlastX	DNA_PiggyBac	1076280	1076549	37	-	.	.
scaffold1024	subtractBed	intrn	1080266	1080541	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1080266	1080541	90	-	.	.
scaffold1024	subtractBed	intrn	1080104	1080166	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	1080104	1080166	41	-	.	.
scaffold1024	subtractBed	intrn	1080212	1080499	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1080212	1080499	97	-	.	.
scaffold1024	subtractBed	intrn	1079920	1080114	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_TcMar-Tc1	1079920	1080114	30	-	.	.
scaffold1024	subtractBed	intrn	1080272	1080607	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1080272	1080607	39	-	.	.
scaffold1024	subtractBed	intrn	1080178	1080270	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1080178	1080270	56	-	.	.
scaffold1024	subtractBed	intrn	1079158	1079424	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1079158	1079424	65	-	.	.
scaffold1024	subtractBed	intrn	1079083	1079412	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	DNA_PiggyBac	1079083	1079412	64	-	.	.
scaffold1024	subtractBed	intrn	1081145	1081339	.	-	.	Parent=CGI_10028565;
	scaffold1024	WUBlastX	LTR_Ngaro	1081145	1081339	42	-	.	.
scaffold1024	subtractBed	intrn	1104822	1104887	.	+	.	Parent=CGI_10028566;
	scaffold1024	TRF	Tandem_Repeat	1104822	1104887	123	+	.	.
scaffold1024	subtractBed	intrn	1105059	1105093	.	+	.	Parent=CGI_10028566;
	scaffold1024	TRF	Tandem_Repeat	1105059	1105093	52	+	.	.
scaffold1024	subtractBed	intrn	1127045	1127081	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1127045	1127081	58	+	.	.
scaffold1024	subtractBed	intrn	1134668	1134862	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1134668	1134862	291	+	.	.
scaffold1024	subtractBed	intrn	1136771	1137225	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1136771	1137225	531	+	.	.
scaffold1024	subtractBed	intrn	1139331	1139426	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1139331	1139426	63	+	.	.
scaffold1024	subtractBed	intrn	1139367	1139523	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1139367	1139523	68	+	.	.
scaffold1024	subtractBed	intrn	1139414	1139497	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1139414	1139497	50	+	.	.
scaffold1024	subtractBed	intrn	1143251	1143320	.	+	.	Parent=CGI_10028569;
	scaffold1024	TRF	Tandem_Repeat	1143251	1143320	119	+	.	.
scaffold1024	subtractBed	intrn	1142064	1142189	.	+	.	Parent=CGI_10028569;
	scaffold1024	WUBlastX	LINE_L1	1142064	1142189	21	+	.	.
scaffold1024	subtractBed	intrn	1140780	1140971	.	+	.	Parent=CGI_10028569;
	scaffold1024	WUBlastX	LINE_L1-Tx1	1140780	1140971	41	+	.	.
scaffold1024	subtractBed	intrn	1151832	1152111	.	+	.	Parent=CGI_10028571;
	scaffold1024	TRF	Tandem_Repeat	1151832	1152111	323	+	.	.
scaffold1024	subtractBed	intrn	1152378	1153106	.	+	.	Parent=CGI_10028571;
	scaffold1024	TRF	Tandem_Repeat	1152378	1153106	494	+	.	.
scaffold1024	subtractBed	intrn	1160202	1160240	.	+	.	Parent=CGI_10028571;
	scaffold1024	TRF	Tandem_Repeat	1160202	1160240	78	+	.	.
scaffold1024	subtractBed	intrn	1160485	1160553	.	+	.	Parent=CGI_10028571;
	scaffold1024	TRF	Tandem_Repeat	1160485	1160553	138	+	.	.
scaffold1024	subtractBed	intrn	1301917	1302718	.	-	.	Parent=CGI_10028574;
	scaffold1024	TRF	Tandem_Repeat	1301917	1302718	1197	+	.	.
scaffold1024	subtractBed	intrn	1302730	1302764	.	-	.	Parent=CGI_10028574;
	scaffold1024	TRF	Tandem_Repeat	1302730	1302764	52	+	.	.
scaffold1024	subtractBed	intrn	1302723	1302765	.	-	.	Parent=CGI_10028574;
	scaffold1024	TRF	Tandem_Repeat	1302723	1302765	59	+	.	.
scaffold1024	subtractBed	intrn	1368718	1368866	.	-	.	Parent=CGI_10028576;
	scaffold1024	TRF	Tandem_Repeat	1368718	1368866	79	+	.	.
scaffold1024	subtractBed	intrn	1369833	1370577	.	-	.	Parent=CGI_10028576;
	scaffold1024	TRF	Tandem_Repeat	1369833	1370577	935	+	.	.
scaffold1024	subtractBed	intrn	1370715	1370752	.	-	.	Parent=CGI_10028576;
	scaffold1024	TRF	Tandem_Repeat	1370715	1370752	60	+	.	.
scaffold1024	subtractBed	intrn	1554486	1554533	.	-	.	Parent=CGI_10028580;
	scaffold1024	TRF	Tandem_Repeat	1554486	1554533	96	+	.	.
scaffold1024	subtractBed	intrn	1558113	1558161	.	-	.	Parent=CGI_10028580;
	scaffold1024	TRF	Tandem_Repeat	1558113	1558161	98	+	.	.
scaffold1024	subtractBed	intrn	1562194	1562238	.	-	.	Parent=CGI_10028580;
	scaffold1024	TRF	Tandem_Repeat	1562194	1562238	63	+	.	.
scaffold1024	subtractBed	intrn	1577105	1577138	.	-	.	Parent=CGI_10028581;
	scaffold1024	TRF	Tandem_Repeat	1577105	1577138	59	+	.	.
scaffold1024	subtractBed	intrn	1701971	1702258	.	-	.	Parent=CGI_10028584;
	scaffold1024	WUBlastX	LTR_Ngaro	1701971	1702258	180	+	.	.
scaffold1024	subtractBed	intrn	1700980	1701720	.	-	.	Parent=CGI_10028584;
	scaffold1024	WUBlastX	LTR_Ngaro	1700980	1701720	199	+	.	.
scaffold1024	subtractBed	intrn	1701250	1701867	.	-	.	Parent=CGI_10028584;
	scaffold1024	WUBlastX	LTR_Ngaro	1701250	1701867	75	+	.	.
scaffold1024	subtractBed	intrn	1706421	1706510	.	-	.	Parent=CGI_10028584;
	scaffold1024	TRF	Tandem_Repeat	1706421	1706510	153	+	.	.
scaffold1024	subtractBed	intrn	1719271	1719323	.	-	.	Parent=CGI_10028584;
	scaffold1024	TRF	Tandem_Repeat	1719271	1719323	61	+	.	.
scaffold1024	subtractBed	intrn	1719388	1719452	.	-	.	Parent=CGI_10028584;
	scaffold1024	TRF	Tandem_Repeat	1719388	1719452	112	+	.	.
scaffold1024	subtractBed	intrn	1724061	1724393	.	-	.	Parent=CGI_10028584;
	scaffold1024	WUBlastX	DNA_IS4EU	1724061	1724393	116	+	.	.
scaffold1024	subtractBed	intrn	1724061	1724477	.	-	.	Parent=CGI_10028584;
	scaffold1024	WUBlastX	DNA_IS4EU	1724061	1724477	101	+	.	.
scaffold1024	subtractBed	intrn	1758683	1758961	.	-	.	Parent=CGI_10028585;
	scaffold1024	WUBlastX	DNA_IS4EU	1758683	1758961	162	+	.	.
scaffold1024	subtractBed	intrn	1761773	1761991	.	-	.	Parent=CGI_10028585;
	scaffold1024	WUBlastX	DNA_IS4EU	1761773	1761991	74	-	.	.
scaffold1024	subtractBed	intrn	1761728	1761964	.	-	.	Parent=CGI_10028585;
	scaffold1024	WUBlastX	DNA_Kolobok-IS4	1761728	1761964	60	-	.	.
scaffold1024	subtractBed	intrn	1757044	1757136	.	-	.	Parent=CGI_10028585;
	scaffold1024	WUBlastX	DNA_Kolobok-IS4	1757044	1757136	32	+	.	.
scaffold1024	subtractBed	intrn	1757149	1757313	.	-	.	Parent=CGI_10028585;
	scaffold1024	WUBlastX	DNA_Kolobok-IS4	1757149	1757313	22	+	.	.
scaffold1026	subtractBed	intrn	28267	28333	.	-	.	Parent=CGI_10003206;
	scaffold1026	TRF	Tandem_Repeat	28267	28333	134	+	.	.
scaffold1028	subtractBed	intrn	34589	34660	.	-	.	Parent=CGI_10009717;
	scaffold1028	TRF	Tandem_Repeat	34589	34660	67	+	.	.
scaffold1028	subtractBed	intrn	43340	43364	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	43340	43364	50	+	.	.
scaffold1028	subtractBed	intrn	44213	44253	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	44213	44253	82	+	.	.
scaffold1028	subtractBed	intrn	42081	42257	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42081	42257	39	+	.	.
scaffold1028	subtractBed	intrn	42524	42757	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42524	42757	54	+	.	.
scaffold1028	subtractBed	intrn	42039	42266	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42039	42266	21	+	.	.
scaffold1028	subtractBed	intrn	42111	42278	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42111	42278	43	+	.	.
scaffold1028	subtractBed	intrn	42117	42332	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42117	42332	41	+	.	.
scaffold1028	subtractBed	intrn	42407	42739	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42407	42739	48	+	.	.
scaffold1028	subtractBed	intrn	42302	42781	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_RTE-X	42302	42781	29	+	.	.
scaffold1028	subtractBed	intrn	48100	48150	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	48100	48150	57	+	.	.
scaffold1028	subtractBed	intrn	48364	48612	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	48364	48612	306	+	.	.
scaffold1028	subtractBed	intrn	50579	50629	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	50579	50629	93	+	.	.
scaffold1028	subtractBed	intrn	62536	62604	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_L1-Tx1	62536	62604	20	+	.	.
scaffold1028	subtractBed	intrn	63151	63651	.	-	.	Parent=CGI_10009718;
	scaffold1028	WUBlastX	LINE_L1-Tx1	63151	63651	76	+	.	.
scaffold1028	subtractBed	intrn	81838	82242	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	81838	82242	603	+	.	.
scaffold1028	subtractBed	intrn	98637	98723	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	98637	98723	104	+	.	.
scaffold1028	subtractBed	intrn	98969	99127	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	98969	99127	133	+	.	.
scaffold1028	subtractBed	intrn	99036	99138	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	99036	99138	118	+	.	.
scaffold1028	subtractBed	intrn	99212	99298	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	99212	99298	93	+	.	.
scaffold1028	subtractBed	intrn	102578	103230	.	-	.	Parent=CGI_10009718;
	scaffold1028	TRF	Tandem_Repeat	102578	103230	834	+	.	.
scaffold1028	subtractBed	intrn	130102	130452	.	+	.	Parent=CGI_10009721;
	scaffold1028	TRF	Tandem_Repeat	130102	130452	589	+	.	.
scaffold1028	subtractBed	intrn	136771	137486	.	+	.	Parent=CGI_10009721;
	scaffold1028	TRF	Tandem_Repeat	136771	137486	243	+	.	.
scaffold1028	subtractBed	intrn	137056	137540	.	+	.	Parent=CGI_10009721;
	scaffold1028	TRF	Tandem_Repeat	137056	137540	784	+	.	.
scaffold1028	subtractBed	intrn	140514	140714	.	+	.	Parent=CGI_10009721;
	scaffold1028	TRF	Tandem_Repeat	140469	140714	391	+	.	.
scaffold1028	subtractBed	intrn	219283	219344	.	+	.	Parent=CGI_10009724;
	scaffold1028	TRF	Tandem_Repeat	219283	219344	124	+	.	.
scaffold1031	subtractBed	intrn	6442	6477	.	-	.	Parent=CGI_10019690;
	scaffold1031	TRF	Tandem_Repeat	6442	6477	63	+	.	.
scaffold1031	subtractBed	intrn	9103	9324	.	-	.	Parent=CGI_10019690;
	scaffold1031	WUBlastX	LINE_Penelope	9103	9324	28	-	.	.
scaffold1031	subtractBed	intrn	10281	10424	.	-	.	Parent=CGI_10019690;
	scaffold1031	WUBlastX	LINE_Penelope	10281	10424	56	-	.	.
scaffold1031	subtractBed	intrn	8808	9077	.	-	.	Parent=CGI_10019690;
	scaffold1031	WUBlastX	LINE_Penelope	8808	9077	31	-	.	.
scaffold1031	subtractBed	intrn	50787	50851	.	+	.	Parent=CGI_10019692;
	scaffold1031	TRF	Tandem_Repeat	50787	50851	121	+	.	.
scaffold1031	subtractBed	intrn	51053	51116	.	+	.	Parent=CGI_10019692;
	scaffold1031	TRF	Tandem_Repeat	51053	51116	119	+	.	.
scaffold1031	subtractBed	intrn	52245	52306	.	+	.	Parent=CGI_10019692;
	scaffold1031	TRF	Tandem_Repeat	52245	52306	108	+	.	.
scaffold1031	subtractBed	intrn	70885	70926	.	-	.	Parent=CGI_10019693;
	scaffold1031	TRF	Tandem_Repeat	70885	70926	66	+	.	.
scaffold1031	subtractBed	intrn	146354	146380	.	+	.	Parent=CGI_10019696;
	scaffold1031	TRF	Tandem_Repeat	146354	146380	54	+	.	.
scaffold1031	subtractBed	intrn	147244	147278	.	+	.	Parent=CGI_10019696;
	scaffold1031	TRF	Tandem_Repeat	147244	147278	70	+	.	.
scaffold1031	subtractBed	intrn	152382	152410	.	+	.	Parent=CGI_10019696;
	scaffold1031	TRF	Tandem_Repeat	152382	152410	58	+	.	.
scaffold1031	subtractBed	intrn	207021	207359	.	-	.	Parent=CGI_10019698;
	scaffold1031	WUBlastX	DNA_IS4EU	207021	207359	152	+	.	.
scaffold1031	subtractBed	intrn	206913	207350	.	-	.	Parent=CGI_10019698;
	scaffold1031	WUBlastX	DNA_Kolobok-IS4	206913	207350	148	+	.	.
scaffold1031	subtractBed	intrn	206716	206943	.	-	.	Parent=CGI_10019698;
	scaffold1031	WUBlastX	DNA_IS4EU	206716	206943	22	+	.	.
scaffold1031	subtractBed	intrn	206313	206414	.	-	.	Parent=CGI_10019698;
	scaffold1031	WUBlastX	LTR_DIRS	206313	206414	39	-	.	.
scaffold1031	subtractBed	intrn	206401	206553	.	-	.	Parent=CGI_10019698;
	scaffold1031	WUBlastX	LTR_DIRS	206401	206553	24	-	.	.
scaffold1031	subtractBed	intrn	364550	364645	.	-	.	Parent=CGI_10019705;
	scaffold1031	TRF	Tandem_Repeat	364550	364645	111	+	.	.
scaffold1031	subtractBed	intrn	387943	388623	.	-	.	Parent=CGI_10019708;
	scaffold1031	WUBlastX	DNA_hAT	387943	388623	75	-	.	.
scaffold1031	subtractBed	intrn	417345	417831	.	+	.	Parent=CGI_10019710;
	scaffold1031	TRF	Tandem_Repeat	417345	417831	239	+	.	.
scaffold1031	subtractBed	intrn	443163	443895	.	+	.	Parent=CGI_10019710;
	scaffold1031	TRF	Tandem_Repeat	443163	443895	679	+	.	.
scaffold1031	subtractBed	intrn	498013	498046	.	+	.	Parent=CGI_10019711;
	scaffold1031	TRF	Tandem_Repeat	498013	498046	68	+	.	.
scaffold1031	subtractBed	intrn	571909	571941	.	-	.	Parent=CGI_10019718;
	scaffold1031	TRF	Tandem_Repeat	571909	571941	66	+	.	.
scaffold1031	subtractBed	intrn	592219	593214	.	-	.	Parent=CGI_10019718;
	scaffold1031	WUBlastX	DNA_TcMar-Tc1	592219	593214	147	-	.	.
scaffold1031	subtractBed	intrn	592369	593211	.	-	.	Parent=CGI_10019718;
	scaffold1031	WUBlastX	DNA_TcMar-Tc1	592369	593211	264	-	.	.
scaffold1031	subtractBed	intrn	592185	592346	.	-	.	Parent=CGI_10019718;
	scaffold1031	WUBlastX	DNA_TcMar-Tc1	592185	592346	69	-	.	.
scaffold1032	subtractBed	intrn	5238	5452	.	+	.	Parent=CGI_10021654;
	scaffold1032	TRF	Tandem_Repeat	5238	5452	342	+	.	.
scaffold1032	subtractBed	intrn	22202	22429	.	+	.	Parent=CGI_10021656;
	scaffold1032	WUBlastX	DNA_Sola	22045	22872	66	+	.	.
scaffold1032	subtractBed	intrn	23311	23314	.	+	.	Parent=CGI_10021656;
	scaffold1032	WUBlastX	DNA_Sola	23311	23418	21	+	.	.
scaffold1032	subtractBed	intrn	23418	23418	.	+	.	Parent=CGI_10021656;
	scaffold1032	WUBlastX	DNA_Sola	23311	23418	21	+	.	.
scaffold1032	subtractBed	intrn	23494	23501	.	+	.	Parent=CGI_10021656;
	scaffold1032	WUBlastX	DNA_Sola	23494	23949	103	+	.	.
scaffold1032	subtractBed	intrn	28152	28184	.	-	.	Parent=CGI_10021657;
	scaffold1032	TRF	Tandem_Repeat	28152	28184	57	+	.	.
scaffold1032	subtractBed	intrn	28152	28184	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	28152	28184	57	+	.	.
scaffold1032	subtractBed	intrn	34312	34345	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	34312	34345	68	+	.	.
scaffold1032	subtractBed	intrn	39778	39820	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	39778	39820	77	+	.	.
scaffold1032	subtractBed	intrn	46202	46322	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	46202	46322	188	+	.	.
scaffold1032	subtractBed	intrn	46187	46332	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	46187	46332	163	+	.	.
scaffold1032	subtractBed	intrn	49293	49323	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	49293	49323	53	+	.	.
scaffold1032	subtractBed	intrn	49529	50787	.	+	.	Parent=CGI_10021658;
	scaffold1032	TRF	Tandem_Repeat	49529	50787	1839	+	.	.
scaffold1032	subtractBed	intrn	158711	158772	.	-	.	Parent=CGI_10021662;
	scaffold1032	TRF	Tandem_Repeat	158711	158772	108	+	.	.
scaffold1032	subtractBed	intrn	197263	197393	.	-	.	Parent=CGI_10021666;
	scaffold1032	TRF	Tandem_Repeat	197263	197393	239	+	.	.
scaffold1032	subtractBed	intrn	231603	232510	.	-	.	Parent=CGI_10021671;
	scaffold1032	TRF	Tandem_Repeat	231603	232510	1496	+	.	.
scaffold1032	subtractBed	intrn	240931	240979	.	-	.	Parent=CGI_10021671;
	scaffold1032	TRF	Tandem_Repeat	240931	240979	98	+	.	.
scaffold1032	subtractBed	intrn	242407	243686	.	-	.	Parent=CGI_10021671;
	scaffold1032	TRF	Tandem_Repeat	242407	243686	1469	+	.	.
scaffold1032	subtractBed	intrn	243857	243888	.	-	.	Parent=CGI_10021671;
	scaffold1032	TRF	Tandem_Repeat	243857	243888	55	+	.	.
scaffold1032	subtractBed	intrn	298542	298592	.	-	.	Parent=CGI_10021677;
	scaffold1032	TRF	Tandem_Repeat	298542	298592	102	+	.	.
scaffold1032	subtractBed	intrn	302311	302368	.	-	.	Parent=CGI_10021677;
	scaffold1032	TRF	Tandem_Repeat	302311	302368	82	+	.	.
scaffold1032	subtractBed	intrn	302628	302697	.	-	.	Parent=CGI_10021677;
	scaffold1032	TRF	Tandem_Repeat	302628	302697	133	+	.	.
scaffold1032	subtractBed	intrn	325057	325358	.	-	.	Parent=CGI_10021678;
	scaffold1032	TRF	Tandem_Repeat	325034	325358	484	+	.	.
scaffold1032	subtractBed	intrn	326427	326475	.	-	.	Parent=CGI_10021678;
	scaffold1032	TRF	Tandem_Repeat	326427	326475	62	+	.	.
scaffold1032	subtractBed	intrn	326424	326476	.	-	.	Parent=CGI_10021678;
	scaffold1032	TRF	Tandem_Repeat	326424	326476	56	+	.	.
scaffold1032	subtractBed	intrn	334333	334385	.	-	.	Parent=CGI_10021678;
	scaffold1032	TRF	Tandem_Repeat	334333	334385	106	+	.	.
scaffold1032	subtractBed	intrn	351784	351820	.	+	.	Parent=CGI_10021679;
	scaffold1032	TRF	Tandem_Repeat	351784	351820	56	+	.	.
scaffold1032	subtractBed	intrn	382988	383125	.	+	.	Parent=CGI_10021679;
	scaffold1032	TRF	Tandem_Repeat	382988	383125	232	+	.	.
scaffold1032	subtractBed	intrn	383394	383669	.	+	.	Parent=CGI_10021679;
	scaffold1032	TRF	Tandem_Repeat	383394	383669	411	+	.	.
scaffold1032	subtractBed	intrn	409492	409887	.	+	.	Parent=CGI_10021679;
	scaffold1032	TRF	Tandem_Repeat	409492	409887	257	+	.	.
scaffold1032	subtractBed	intrn	409492	409887	.	+	.	Parent=CGI_10021679;
	scaffold1032	TRF	Tandem_Repeat	409492	409887	255	+	.	.
scaffold1032	subtractBed	intrn	421655	421717	.	-	.	Parent=CGI_10021682;
	scaffold1032	TRF	Tandem_Repeat	421655	421717	117	+	.	.
scaffold1032	subtractBed	intrn	511843	512678	.	-	.	Parent=CGI_10021688;
	scaffold1032	TRF	Tandem_Repeat	511843	512678	1408	+	.	.
scaffold1032	subtractBed	intrn	517219	517256	.	-	.	Parent=CGI_10021688;
	scaffold1032	TRF	Tandem_Repeat	517219	517256	67	+	.	.
scaffold1032	subtractBed	intrn	524542	524851	.	+	.	Parent=CGI_10021690;
	scaffold1032	TRF	Tandem_Repeat	524542	524851	512	+	.	.
scaffold1032	subtractBed	intrn	551571	551957	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	DNA_TcMar-Marin	551571	551957	230	-	.	.
scaffold1032	subtractBed	intrn	552447	552824	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	DNA_TcMar-Marin	552447	552824	136	-	.	.
scaffold1032	subtractBed	intrn	552166	552453	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	DNA_TcMar-Marin	552166	552453	191	-	.	.
scaffold1032	subtractBed	intrn	552157	552513	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	DNA_TcMar-Marin	552157	552513	168	-	.	.
scaffold1032	subtractBed	intrn	565176	565206	.	-	.	Parent=CGI_10021693;
	scaffold1032	TRF	Tandem_Repeat	565176	565206	62	+	.	.
scaffold1032	subtractBed	intrn	567893	568222	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	LINE_RTE-X	567893	568222	121	-	.	.
scaffold1032	subtractBed	intrn	568213	568431	.	-	.	Parent=CGI_10021693;
	scaffold1032	WUBlastX	LINE_RTE-X	568213	568431	42	-	.	.
scaffold1032	subtractBed	intrn	565176	565206	.	+	.	Parent=CGI_10021694;
	scaffold1032	TRF	Tandem_Repeat	565176	565206	62	+	.	.
scaffold1032	subtractBed	intrn	567893	568222	.	+	.	Parent=CGI_10021694;
	scaffold1032	WUBlastX	LINE_RTE-X	567893	568222	121	-	.	.
scaffold1032	subtractBed	intrn	568213	568431	.	+	.	Parent=CGI_10021694;
	scaffold1032	WUBlastX	LINE_RTE-X	568213	568431	42	-	.	.
scaffold1032	subtractBed	intrn	638411	638857	.	-	.	Parent=CGI_10021698;
	scaffold1032	TRF	Tandem_Repeat	638411	638857	515	+	.	.
scaffold1032	subtractBed	intrn	638431	638507	.	-	.	Parent=CGI_10021698;
	scaffold1032	TRF	Tandem_Repeat	638431	638507	72	+	.	.
scaffold1032	subtractBed	intrn	641920	642818	.	-	.	Parent=CGI_10021698;
	scaffold1032	TRF	Tandem_Repeat	641920	642818	711	+	.	.
scaffold1032	subtractBed	intrn	641920	642818	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	641920	642818	711	+	.	.
scaffold1032	subtractBed	intrn	648420	648454	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	648420	648454	70	+	.	.
scaffold1032	subtractBed	intrn	648824	648865	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	648824	648865	84	+	.	.
scaffold1032	subtractBed	intrn	654324	655078	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	654324	655078	933	+	.	.
scaffold1032	subtractBed	intrn	667393	667417	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	667393	667417	50	+	.	.
scaffold1032	subtractBed	intrn	668707	669024	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	668707	669024	283	+	.	.
scaffold1032	subtractBed	intrn	668707	669024	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	668707	669024	349	+	.	.
scaffold1032	subtractBed	intrn	668707	669024	.	+	.	Parent=CGI_10021699;
	scaffold1032	TRF	Tandem_Repeat	668707	669024	363	+	.	.
scaffold1032	subtractBed	intrn	689078	689196	.	-	.	Parent=CGI_10021702;
	scaffold1032	TRF	Tandem_Repeat	689078	689196	89	+	.	.
scaffold1032	subtractBed	intrn	689262	689474	.	-	.	Parent=CGI_10021702;
	scaffold1032	TRF	Tandem_Repeat	689262	689474	150	+	.	.
scaffold1032	subtractBed	intrn	707814	708164	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_RTE-X	707814	708164	157	+	.	.
scaffold1032	subtractBed	intrn	708134	708838	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_RTE-X	708134	708838	84	+	.	.
scaffold1032	subtractBed	intrn	707889	708191	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_RTE-X	707889	708191	232	+	.	.
scaffold1032	subtractBed	intrn	708203	708715	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_RTE-X	708203	708715	285	+	.	.
scaffold1032	subtractBed	intrn	707715	708161	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_L2	707715	708161	66	+	.	.
scaffold1032	subtractBed	intrn	708245	708886	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_R2-Hero	708245	708958	27	+	.	.
scaffold1032	subtractBed	intrn	709520	710482	.	-	.	Parent=CGI_10021705;
	scaffold1032	WUBlastX	LINE_RTE-X	709520	710482	241	+	.	.
scaffold1033	subtractBed	intrn	24913	24943	.	+	.	Parent=CGI_10007943;
	scaffold1033	TRF	Tandem_Repeat	24913	24943	62	+	.	.
scaffold1033	subtractBed	intrn	41954	42036	.	+	.	Parent=CGI_10007944;
	scaffold1033	TRF	Tandem_Repeat	41954	42036	62	+	.	.
scaffold1033	subtractBed	intrn	49443	49485	.	+	.	Parent=CGI_10007944;
	scaffold1033	TRF	Tandem_Repeat	49443	49485	58	+	.	.
scaffold1033	subtractBed	intrn	49444	49498	.	+	.	Parent=CGI_10007944;
	scaffold1033	TRF	Tandem_Repeat	49444	49498	55	+	.	.
scaffold1033	subtractBed	intrn	49984	50030	.	+	.	Parent=CGI_10007944;
	scaffold1033	TRF	Tandem_Repeat	49984	50030	94	+	.	.
scaffold1033	subtractBed	intrn	136508	136563	.	+	.	Parent=CGI_10007949;
	scaffold1033	TRF	Tandem_Repeat	136508	136563	112	+	.	.
scaffold1033	subtractBed	intrn	139463	139501	.	+	.	Parent=CGI_10007949;
	scaffold1033	TRF	Tandem_Repeat	139463	139501	78	+	.	.
scaffold1033	subtractBed	intrn	140130	140182	.	+	.	Parent=CGI_10007949;
	scaffold1033	TRF	Tandem_Repeat	140130	140182	106	+	.	.
scaffold1035	subtractBed	intrn	161709	161819	.	+	.	Parent=CGI_10009365;
	scaffold1035	WUBlastX	DNA_Kolobok	161709	161819	66	-	.	.
scaffold1035	subtractBed	intrn	161685	161924	.	+	.	Parent=CGI_10009365;
	scaffold1035	WUBlastX	DNA_Kolobok	161685	161924	27	-	.	.
scaffold1036	subtractBed	intrn	71238	71411	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	71238	71411	82	+	.	.
scaffold1036	subtractBed	intrn	68299	68433	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	68299	68433	45	+	.	.
scaffold1036	subtractBed	intrn	67772	68227	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	67772	68227	52	+	.	.
scaffold1036	subtractBed	intrn	69276	69509	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_Kolobok-IS4	69276	69509	110	-	.	.
scaffold1036	subtractBed	intrn	67360	67542	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	67360	67542	33	+	.	.
scaffold1036	subtractBed	intrn	68033	68272	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	68033	68272	42	+	.	.
scaffold1036	subtractBed	intrn	71116	71235	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_Kolobok-IS4	71116	71235	25	+	.	.
scaffold1036	subtractBed	intrn	71226	71438	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_Kolobok-IS4	71226	71438	76	+	.	.
scaffold1036	subtractBed	intrn	67913	68215	.	-	.	Parent=CGI_10019943;
	scaffold1036	WUBlastX	DNA_IS4EU	67913	68215	61	+	.	.
scaffold1036	subtractBed	intrn	85881	85910	.	-	.	Parent=CGI_10019945;
	scaffold1036	TRF	Tandem_Repeat	85881	85910	51	+	.	.
scaffold1036	subtractBed	intrn	167250	168185	.	-	.	Parent=CGI_10019951;
	scaffold1036	WUBlastX	LINE_RTE-X	167250	168185	562	+	.	.
scaffold1036	subtractBed	intrn	176882	177011	.	-	.	Parent=CGI_10019951;
	scaffold1036	TRF	Tandem_Repeat	176882	177011	176	+	.	.
scaffold1036	subtractBed	intrn	177371	177397	.	-	.	Parent=CGI_10019951;
	scaffold1036	TRF	Tandem_Repeat	177371	177397	54	+	.	.
scaffold1036	subtractBed	intrn	174808	175119	.	-	.	Parent=CGI_10019951;
	scaffold1036	WUBlastX	DNA_TcMar-Tc1	174808	175119	109	+	.	.
scaffold1036	subtractBed	intrn	173362	173784	.	-	.	Parent=CGI_10019951;
	scaffold1036	WUBlastX	DNA_TcMar-Tc1	173362	173784	98	+	.	.
scaffold1036	subtractBed	intrn	174736	175119	.	-	.	Parent=CGI_10019951;
	scaffold1036	WUBlastX	DNA_TcMar-Tc1	174736	175119	22	+	.	.
scaffold1036	subtractBed	intrn	175088	175396	.	-	.	Parent=CGI_10019951;
	scaffold1036	WUBlastX	DNA_TcMar-Tc1	175088	175396	144	+	.	.
scaffold1036	subtractBed	intrn	202428	202837	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	202361	202837	219	-	.	.
scaffold1036	subtractBed	intrn	203226	203390	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	203226	203390	76	-	.	.
scaffold1036	subtractBed	intrn	202831	203238	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	202831	203238	129	-	.	.
scaffold1036	subtractBed	intrn	203247	203441	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	203247	203441	62	-	.	.
scaffold1036	subtractBed	intrn	202433	202915	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	202433	202915	187	-	.	.
scaffold1036	subtractBed	intrn	202428	202436	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	202080	202436	143	-	.	.
scaffold1036	subtractBed	intrn	202430	202834	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	202430	202834	230	-	.	.
scaffold1036	subtractBed	intrn	205040	205228	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205040	205228	48	-	.	.
scaffold1036	subtractBed	intrn	205658	205924	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205658	205924	66	-	.	.
scaffold1036	subtractBed	intrn	204877	205002	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	204877	205002	48	-	.	.
scaffold1036	subtractBed	intrn	205028	205279	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205028	205279	26	-	.	.
scaffold1036	subtractBed	intrn	205739	205936	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205739	205936	91	-	.	.
scaffold1036	subtractBed	intrn	205544	205930	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205544	205930	56	-	.	.
scaffold1036	subtractBed	intrn	205025	205123	.	-	.	Parent=CGI_10019953;
	scaffold1036	WUBlastX	DNA_Maverick	205025	205123	39	-	.	.
scaffold1036	subtractBed	intrn	234004	235065	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_CR1	234004	235065	886	-	.	.
scaffold1036	subtractBed	intrn	235773	235814	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_I	235773	235814	20	-	.	.
scaffold1036	subtractBed	intrn	241964	242613	.	+	.	Parent=CGI_10019957;
	scaffold1036	TRF	Tandem_Repeat	241964	242613	870	+	.	.
scaffold1036	subtractBed	intrn	243924	243995	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_L1-Tx1	243924	243995	23	-	.	.
scaffold1036	subtractBed	intrn	240852	241886	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_L1-Tx1	240852	241886	139	-	.	.
scaffold1036	subtractBed	intrn	242768	243697	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_L1-Tx1	242768	243697	603	-	.	.
scaffold1036	subtractBed	intrn	245130	245165	.	+	.	Parent=CGI_10019957;
	scaffold1036	WUBlastX	LINE_L1	245130	245201	33	-	.	.
scaffold1036	subtractBed	intrn	274829	274929	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	274829	274929	60	+	.	.
scaffold1036	subtractBed	intrn	277413	277532	.	+	.	Parent=CGI_10019959;
	scaffold1036	WUBlastX	DNA_P	277413	277532	30	-	.	.
scaffold1036	subtractBed	intrn	278985	279026	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	278985	279026	84	+	.	.
scaffold1036	subtractBed	intrn	279549	280346	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	279549	280346	926	+	.	.
scaffold1036	subtractBed	intrn	279549	280346	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	279549	280346	924	+	.	.
scaffold1036	subtractBed	intrn	280415	280469	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	280415	280469	110	+	.	.
scaffold1036	subtractBed	intrn	280611	280667	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	280611	280667	57	+	.	.
scaffold1036	subtractBed	intrn	280899	280935	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	280899	280935	74	+	.	.
scaffold1036	subtractBed	intrn	281279	281399	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	281279	281399	158	+	.	.
scaffold1036	subtractBed	intrn	281672	281705	.	+	.	Parent=CGI_10019959;
	scaffold1036	TRF	Tandem_Repeat	281672	281705	54	+	.	.
scaffold1036	subtractBed	intrn	329763	330529	.	+	.	Parent=CGI_10019961;
	scaffold1036	WUBlastX	LTR_Gypsy	329763	330557	202	-	.	.
scaffold1036	subtractBed	intrn	334566	334621	.	+	.	Parent=CGI_10019961;
	scaffold1036	TRF	Tandem_Repeat	334566	334621	112	+	.	.
scaffold1036	subtractBed	intrn	331301	331483	.	+	.	Parent=CGI_10019961;
	scaffold1036	WUBlastX	LTR_Gypsy	331301	331483	65	-	.	.
scaffold1036	subtractBed	intrn	337063	337120	.	+	.	Parent=CGI_10019961;
	scaffold1036	TRF	Tandem_Repeat	337063	337120	64	+	.	.
scaffold1036	subtractBed	intrn	338161	338239	.	+	.	Parent=CGI_10019961;
	scaffold1036	TRF	Tandem_Repeat	338161	338239	140	+	.	.
scaffold1036	subtractBed	intrn	365227	365307	.	+	.	Parent=CGI_10019963;
	scaffold1036	TRF	Tandem_Repeat	365227	365307	83	+	.	.
scaffold1036	subtractBed	intrn	365445	365484	.	+	.	Parent=CGI_10019963;
	scaffold1036	TRF	Tandem_Repeat	365445	365484	80	+	.	.
scaffold1036	subtractBed	intrn	366535	366600	.	+	.	Parent=CGI_10019963;
	scaffold1036	TRF	Tandem_Repeat	366535	366600	132	+	.	.
scaffold1036	subtractBed	intrn	440542	440619	.	+	.	Parent=CGI_10019966;
	scaffold1036	TRF	Tandem_Repeat	440542	440619	147	+	.	.
scaffold1036	subtractBed	intrn	442807	442913	.	+	.	Parent=CGI_10019966;
	scaffold1036	TRF	Tandem_Repeat	442807	442913	91	+	.	.
scaffold1036	subtractBed	intrn	442792	442917	.	+	.	Parent=CGI_10019966;
	scaffold1036	TRF	Tandem_Repeat	442792	442917	252	+	.	.
scaffold1036	subtractBed	intrn	443613	443804	.	+	.	Parent=CGI_10019966;
	scaffold1036	TRF	Tandem_Repeat	443613	443804	348	+	.	.
scaffold1036	subtractBed	intrn	447199	447263	.	+	.	Parent=CGI_10019966;
	scaffold1036	TRF	Tandem_Repeat	447199	447263	96	+	.	.
scaffold1036	subtractBed	intrn	455312	455815	.	-	.	Parent=CGI_10019967;
	scaffold1036	TRF	Tandem_Repeat	455312	455815	226	+	.	.
scaffold1036	subtractBed	intrn	469793	469842	.	+	.	Parent=CGI_10019969;
	scaffold1036	TRF	Tandem_Repeat	469793	469842	91	+	.	.
scaffold1036	subtractBed	intrn	469919	470011	.	+	.	Parent=CGI_10019969;
	scaffold1036	TRF	Tandem_Repeat	469919	470011	99	+	.	.
scaffold1036	subtractBed	intrn	479252	479400	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479252	479518	85	-	.	.
scaffold1036	subtractBed	intrn	479324	479400	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479324	479650	44	-	.	.
scaffold1036	subtractBed	intrn	479312	479400	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479312	479560	51	-	.	.
scaffold1036	subtractBed	intrn	479498	479518	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479252	479518	85	-	.	.
scaffold1036	subtractBed	intrn	479498	479650	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479324	479650	44	-	.	.
scaffold1036	subtractBed	intrn	479498	479560	.	-	.	Parent=CGI_10019970;
	scaffold1036	WUBlastX	DNA_MuDR	479312	479560	51	-	.	.
scaffold1036	subtractBed	intrn	529212	529293	.	+	.	Parent=CGI_10019973;
	scaffold1036	TRF	Tandem_Repeat	529212	529293	139	+	.	.
scaffold1036	subtractBed	intrn	533779	534193	.	+	.	Parent=CGI_10019973;
	scaffold1036	TRF	Tandem_Repeat	533779	534193	647	+	.	.
scaffold1036	subtractBed	intrn	580270	580619	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	580270	580619	555	+	.	.
scaffold1036	subtractBed	intrn	581011	581204	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	581011	581204	335	+	.	.
scaffold1036	subtractBed	intrn	582155	582964	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	582155	582964	1341	+	.	.
scaffold1036	subtractBed	intrn	582815	582957	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	582815	582957	68	+	.	.
scaffold1036	subtractBed	intrn	583431	584069	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	583431	584069	884	+	.	.
scaffold1036	subtractBed	intrn	585820	586701	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	585820	586701	638	+	.	.
scaffold1036	subtractBed	intrn	588033	588087	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	588033	588087	76	+	.	.
scaffold1036	subtractBed	intrn	588260	589292	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	588260	589292	1583	+	.	.
scaffold1036	subtractBed	intrn	590670	590984	.	+	.	Parent=CGI_10019974;
	scaffold1036	TRF	Tandem_Repeat	590670	590984	445	+	.	.
scaffold1036	subtractBed	intrn	596375	596428	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596375	596428	29	+	.	.
scaffold1036	subtractBed	intrn	598621	598761	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Harbinger	598621	598761	58	+	.	.
scaffold1036	subtractBed	intrn	598645	598767	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Harbinger	598645	598767	98	+	.	.
scaffold1036	subtractBed	intrn	596872	597057	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596872	597057	55	+	.	.
scaffold1036	subtractBed	intrn	597286	597642	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Harbinger	597286	597642	131	+	.	.
scaffold1036	subtractBed	intrn	596417	596524	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596417	596524	43	+	.	.
scaffold1036	subtractBed	intrn	596556	596873	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596556	596873	163	+	.	.
scaffold1036	subtractBed	intrn	596872	596991	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596872	596991	68	+	.	.
scaffold1036	subtractBed	intrn	598964	599152	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	LTR_Gypsy	598964	599152	73	+	.	.
scaffold1036	subtractBed	intrn	596484	596867	.	-	.	Parent=CGI_10019975;
	scaffold1036	WUBlastX	DNA_Maverick	596484	596867	152	+	.	.
scaffold1037	subtractBed	intrn	14115	14219	.	+	.	Parent=CGI_10017443;
	scaffold1037	TRF	Tandem_Repeat	14115	14219	72	+	.	.
scaffold1037	subtractBed	intrn	14123	14210	.	+	.	Parent=CGI_10017443;
	scaffold1037	TRF	Tandem_Repeat	14123	14210	77	+	.	.
scaffold1037	subtractBed	intrn	21616	21648	.	+	.	Parent=CGI_10017443;
	scaffold1037	TRF	Tandem_Repeat	21616	21648	66	+	.	.
scaffold1037	subtractBed	intrn	44164	44223	.	+	.	Parent=CGI_10017444;
	scaffold1037	TRF	Tandem_Repeat	44164	44223	120	+	.	.
scaffold1037	subtractBed	intrn	75912	77094	.	+	.	Parent=CGI_10017447;
	scaffold1037	TRF	Tandem_Repeat	75912	77094	572	+	.	.
scaffold1037	subtractBed	intrn	172272	172345	.	+	.	Parent=CGI_10017452;
	scaffold1037	TRF	Tandem_Repeat	172272	172345	148	+	.	.
scaffold1037	subtractBed	intrn	190901	190945	.	-	.	Parent=CGI_10017454;
	scaffold1037	TRF	Tandem_Repeat	190901	190945	90	+	.	.
scaffold1037	subtractBed	intrn	207029	207594	.	+	.	Parent=CGI_10017455;
	scaffold1037	TRF	Tandem_Repeat	207029	207594	1033	+	.	.
scaffold1037	subtractBed	intrn	208643	208682	.	+	.	Parent=CGI_10017455;
	scaffold1037	TRF	Tandem_Repeat	208643	208682	80	+	.	.
scaffold1037	subtractBed	intrn	211603	211697	.	+	.	Parent=CGI_10017456;
	scaffold1037	TRF	Tandem_Repeat	211603	211697	67	+	.	.
scaffold1037	subtractBed	intrn	212287	212484	.	+	.	Parent=CGI_10017456;
	scaffold1037	WUBlastX	LINE_L1-Tx1	212287	212484	79	+	.	.
scaffold1037	subtractBed	intrn	212287	212559	.	+	.	Parent=CGI_10017456;
	scaffold1037	WUBlastX	LINE_L1	212287	212559	31	+	.	.
scaffold1037	subtractBed	intrn	238458	238501	.	-	.	Parent=CGI_10017458;
	scaffold1037	TRF	Tandem_Repeat	238458	238501	88	+	.	.
scaffold1037	subtractBed	intrn	248603	248664	.	+	.	Parent=CGI_10017459;
	scaffold1037	TRF	Tandem_Repeat	248603	248664	124	+	.	.
scaffold1037	subtractBed	intrn	345315	345644	.	+	.	Parent=CGI_10017464;
	scaffold1037	WUBlastX	LTR_DIRS?	345315	345644	200	+	.	.
scaffold1037	subtractBed	intrn	344577	344789	.	+	.	Parent=CGI_10017464;
	scaffold1037	WUBlastX	LTR_DIRS	344577	344789	108	+	.	.
scaffold1037	subtractBed	intrn	344505	344780	.	+	.	Parent=CGI_10017464;
	scaffold1037	WUBlastX	LTR_DIRS?	344505	344780	74	+	.	.
scaffold1037	subtractBed	intrn	394533	394584	.	-	.	Parent=CGI_10017469;
	scaffold1037	TRF	Tandem_Repeat	394533	394584	104	+	.	.
scaffold1037	subtractBed	intrn	397855	397881	.	-	.	Parent=CGI_10017469;
	scaffold1037	TRF	Tandem_Repeat	397855	397881	54	+	.	.
scaffold1037	subtractBed	intrn	398985	399027	.	-	.	Parent=CGI_10017469;
	scaffold1037	TRF	Tandem_Repeat	398985	399027	86	+	.	.
scaffold1037	subtractBed	intrn	399838	399880	.	-	.	Parent=CGI_10017469;
	scaffold1037	TRF	Tandem_Repeat	399838	399880	86	+	.	.
scaffold1037	subtractBed	intrn	471894	471944	.	+	.	Parent=CGI_10017475;
	scaffold1037	TRF	Tandem_Repeat	471894	471944	102	+	.	.
scaffold1037	subtractBed	intrn	478375	478577	.	-	.	Parent=CGI_10017476;
	scaffold1037	TRF	Tandem_Repeat	478375	478587	215	+	.	.
scaffold1037	subtractBed	intrn	504634	504881	.	-	.	Parent=CGI_10017478;
	scaffold1037	TRF	Tandem_Repeat	504634	504881	390	+	.	.
scaffold1037	subtractBed	intrn	504634	505127	.	-	.	Parent=CGI_10017478;
	scaffold1037	TRF	Tandem_Repeat	504634	505127	751	+	.	.
scaffold1037	subtractBed	intrn	504634	505127	.	-	.	Parent=CGI_10017478;
	scaffold1037	TRF	Tandem_Repeat	504634	505127	706	+	.	.
scaffold1037	subtractBed	intrn	504885	505127	.	-	.	Parent=CGI_10017478;
	scaffold1037	TRF	Tandem_Repeat	504885	505127	387	+	.	.
scaffold1041	subtractBed	intrn	91722	91758	.	+	.	Parent=CGI_10014668;
	scaffold1041	TRF	Tandem_Repeat	91722	91758	56	+	.	.
scaffold1041	subtractBed	intrn	230731	230938	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	230703	230938	185	+	.	.
scaffold1041	subtractBed	intrn	235174	235220	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	235174	235220	94	+	.	.
scaffold1041	subtractBed	intrn	249769	249811	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	249769	249811	86	+	.	.
scaffold1041	subtractBed	intrn	255459	255485	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	255459	255485	54	+	.	.
scaffold1041	subtractBed	intrn	263361	263403	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	263361	263403	86	+	.	.
scaffold1041	subtractBed	intrn	267392	267446	.	-	.	Parent=CGI_10014677;
	scaffold1041	TRF	Tandem_Repeat	267392	267446	83	+	.	.
scaffold1041	subtractBed	intrn	274968	274995	.	+	.	Parent=CGI_10014678;
	scaffold1041	TRF	Tandem_Repeat	274968	274995	56	+	.	.
scaffold1041	subtractBed	intrn	274968	274995	.	-	.	Parent=CGI_10014679;
	scaffold1041	TRF	Tandem_Repeat	274968	274995	56	+	.	.
scaffold1041	subtractBed	intrn	294753	294809	.	-	.	Parent=CGI_10014681;
	scaffold1041	WUBlastX	LINE_L1	294654	294809	21	-	.	.
scaffold1041	subtractBed	intrn	304405	304453	.	+	.	Parent=CGI_10014682;
	scaffold1041	TRF	Tandem_Repeat	304405	304453	89	+	.	.
scaffold1041	subtractBed	intrn	307498	307535	.	+	.	Parent=CGI_10014682;
	scaffold1041	TRF	Tandem_Repeat	307498	307535	69	+	.	.
scaffold1041	subtractBed	intrn	326620	326653	.	-	.	Parent=CGI_10014686;
	scaffold1041	TRF	Tandem_Repeat	326620	326653	68	+	.	.
scaffold1041	subtractBed	intrn	329411	329495	.	-	.	Parent=CGI_10014686;
	scaffold1041	TRF	Tandem_Repeat	329411	329495	118	+	.	.
scaffold1041	subtractBed	intrn	334032	334172	.	-	.	Parent=CGI_10014686;
	scaffold1041	TRF	Tandem_Repeat	334032	334172	94	+	.	.
scaffold1041	subtractBed	intrn	334082	334233	.	-	.	Parent=CGI_10014686;
	scaffold1041	TRF	Tandem_Repeat	334082	334233	91	+	.	.
scaffold1041	subtractBed	intrn	334009	334240	.	-	.	Parent=CGI_10014686;
	scaffold1041	TRF	Tandem_Repeat	334009	334240	87	+	.	.
scaffold1045	subtractBed	intrn	66413	66470	.	-	.	Parent=CGI_10004646;
	scaffold1045	TRF	Tandem_Repeat	66413	66470	116	+	.	.
scaffold1045	subtractBed	intrn	67083	67137	.	-	.	Parent=CGI_10004646;
	scaffold1045	TRF	Tandem_Repeat	67083	67137	103	+	.	.
scaffold1045	subtractBed	intrn	77862	77932	.	+	.	Parent=CGI_10004647;
	scaffold1045	TRF	Tandem_Repeat	77862	77932	133	+	.	.
scaffold1045	subtractBed	intrn	77862	77928	.	+	.	Parent=CGI_10004647;
	scaffold1045	TRF	Tandem_Repeat	77862	77928	80	+	.	.
scaffold105	subtractBed	intrn	21625	21674	.	+	.	Parent=CGI_10015738;
	scaffold105	TRF	Tandem_Repeat	21625	21674	64	+	.	.
scaffold105	subtractBed	intrn	21616	21667	.	+	.	Parent=CGI_10015738;
	scaffold105	TRF	Tandem_Repeat	21616	21667	68	+	.	.
scaffold105	subtractBed	intrn	32398	32669	.	+	.	Parent=CGI_10015738;
	scaffold105	TRF	Tandem_Repeat	32392	32669	522	+	.	.
scaffold105	subtractBed	intrn	43531	43681	.	+	.	Parent=CGI_10015738;
	scaffold105	TRF	Tandem_Repeat	43531	43681	83	+	.	.
scaffold105	subtractBed	intrn	71025	71069	.	+	.	Parent=CGI_10015740;
	scaffold105	TRF	Tandem_Repeat	71025	71069	90	+	.	.
scaffold105	subtractBed	intrn	83769	83805	.	-	.	Parent=CGI_10015741;
	scaffold105	TRF	Tandem_Repeat	83769	83805	56	+	.	.
scaffold105	subtractBed	intrn	86093	86197	.	-	.	Parent=CGI_10015741;
	scaffold105	TRF	Tandem_Repeat	86093	86197	192	+	.	.
scaffold105	subtractBed	intrn	319192	319537	.	+	.	Parent=CGI_10015755;
	scaffold105	TRF	Tandem_Repeat	319192	319537	277	+	.	.
scaffold105	subtractBed	intrn	319603	319652	.	+	.	Parent=CGI_10015755;
	scaffold105	TRF	Tandem_Repeat	319603	319652	100	+	.	.
scaffold105	subtractBed	intrn	317526	317606	.	+	.	Parent=CGI_10015755;
	scaffold105	WUBlastX	DNA_hAT-Ac	317526	317606	56	-	.	.
scaffold105	subtractBed	intrn	317633	317767	.	+	.	Parent=CGI_10015755;
	scaffold105	WUBlastX	DNA_hAT-Ac	317633	317767	64	-	.	.
scaffold105	subtractBed	intrn	392844	392869	.	+	.	Parent=CGI_10015757;
	scaffold105	TRF	Tandem_Repeat	392844	392869	52	+	.	.
scaffold105	subtractBed	intrn	440625	440683	.	-	.	Parent=CGI_10015758;
	scaffold105	TRF	Tandem_Repeat	440625	440683	61	+	.	.
scaffold1050	subtractBed	intrn	23556	23584	.	+	.	Parent=CGI_10009165;
	scaffold1050	TRF	Tandem_Repeat	23556	23584	58	+	.	.
scaffold1050	subtractBed	intrn	24424	24500	.	+	.	Parent=CGI_10009165;
	scaffold1050	TRF	Tandem_Repeat	24424	24500	136	+	.	.
scaffold1050	subtractBed	intrn	85321	85448	.	+	.	Parent=CGI_10009169;
	scaffold1050	TRF	Tandem_Repeat	85298	85448	293	+	.	.
scaffold1050	subtractBed	intrn	90118	90217	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	90118	90217	200	+	.	.
scaffold1050	subtractBed	intrn	93205	93236	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	93205	93236	64	+	.	.
scaffold1050	subtractBed	intrn	93771	93804	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	93771	93804	68	+	.	.
scaffold1050	subtractBed	intrn	99198	99230	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	99198	99230	66	+	.	.
scaffold1050	subtractBed	intrn	101889	102190	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	101889	102190	388	+	.	.
scaffold1050	subtractBed	intrn	101889	102196	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	101889	102196	490	+	.	.
scaffold1050	subtractBed	intrn	103487	103832	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	103487	103832	422	+	.	.
scaffold1050	subtractBed	intrn	103471	103832	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	103471	103832	532	+	.	.
scaffold1050	subtractBed	intrn	104689	104724	.	+	.	Parent=CGI_10009170;
	scaffold1050	TRF	Tandem_Repeat	104689	104724	72	+	.	.
scaffold1050	subtractBed	intrn	119405	119446	.	+	.	Parent=CGI_10009172;
	scaffold1050	TRF	Tandem_Repeat	119405	119446	61	+	.	.
scaffold1050	subtractBed	intrn	115644	116192	.	+	.	Parent=CGI_10009172;
	scaffold1050	WUBlastX	LINE_L2	115644	116192	63	+	.	.
scaffold1050	subtractBed	intrn	115644	115997	.	+	.	Parent=CGI_10009172;
	scaffold1050	WUBlastX	LINE_L2	115644	115997	96	+	.	.
scaffold1050	subtractBed	intrn	146193	146226	.	-	.	Parent=CGI_10009176;
	scaffold1050	TRF	Tandem_Repeat	146193	146226	68	+	.	.
scaffold1050	subtractBed	intrn	168027	168071	.	+	.	Parent=CGI_10009177;
	scaffold1050	TRF	Tandem_Repeat	168027	168071	72	+	.	.
scaffold1050	subtractBed	intrn	168027	168074	.	+	.	Parent=CGI_10009177;
	scaffold1050	TRF	Tandem_Repeat	168027	168074	51	+	.	.
scaffold1050	subtractBed	intrn	184507	184607	.	+	.	Parent=CGI_10009179;
	scaffold1050	TRF	Tandem_Repeat	184507	184607	76	+	.	.
scaffold1050	subtractBed	intrn	184619	184791	.	+	.	Parent=CGI_10009179;
	scaffold1050	TRF	Tandem_Repeat	184619	184791	150	+	.	.
scaffold1050	subtractBed	intrn	198970	198997	.	+	.	Parent=CGI_10009180;
	scaffold1050	TRF	Tandem_Repeat	198970	198997	56	+	.	.
scaffold1050	subtractBed	intrn	204124	204294	.	+	.	Parent=CGI_10009180;
	scaffold1050	TRF	Tandem_Repeat	204124	204294	153	+	.	.
scaffold1050	subtractBed	intrn	204124	204294	.	+	.	Parent=CGI_10009180;
	scaffold1050	TRF	Tandem_Repeat	204124	204294	198	+	.	.
scaffold1050	subtractBed	intrn	204293	204480	.	+	.	Parent=CGI_10009180;
	scaffold1050	TRF	Tandem_Repeat	204293	204480	218	+	.	.
scaffold1050	subtractBed	intrn	204363	204480	.	+	.	Parent=CGI_10009180;
	scaffold1050	TRF	Tandem_Repeat	204363	204480	148	+	.	.
scaffold1050	subtractBed	intrn	215351	215352	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	215008	215352	180	+	.	.
scaffold1050	subtractBed	intrn	215737	216276	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	215737	216276	126	+	.	.
scaffold1050	subtractBed	intrn	216432	216438	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	216432	216644	81	+	.	.
scaffold1050	subtractBed	intrn	216643	216644	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	216432	216644	81	+	.	.
scaffold1050	subtractBed	intrn	216944	216953	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	216944	217096	40	+	.	.
scaffold1050	subtractBed	intrn	217095	217096	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	216944	217096	40	+	.	.
scaffold1050	subtractBed	intrn	217320	217329	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	217320	217526	53	+	.	.
scaffold1050	subtractBed	intrn	217824	217825	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	217824	218045	98	+	.	.
scaffold1050	subtractBed	intrn	217523	217526	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	217362	217526	80	+	.	.
scaffold1050	subtractBed	intrn	217523	217526	.	+	.	Parent=CGI_10009182;
	scaffold1050	WUBlastX	DNA_hAT	217320	217526	53	+	.	.
scaffold1052	subtractBed	intrn	3776	3841	.	-	.	Parent=CGI_10005467;
	scaffold1052	TRF	Tandem_Repeat	3776	3841	107	+	.	.
scaffold1052	subtractBed	intrn	3779	3840	.	-	.	Parent=CGI_10005467;
	scaffold1052	TRF	Tandem_Repeat	3779	3840	63	+	.	.
scaffold1052	subtractBed	intrn	3776	3834	.	-	.	Parent=CGI_10005467;
	scaffold1052	TRF	Tandem_Repeat	3776	3834	82	+	.	.
scaffold1052	subtractBed	intrn	35731	37764	.	-	.	Parent=CGI_10005467;
	scaffold1052	WUBlastX	LTR_DIRS	35731	37764	1220	-	.	.
scaffold1052	subtractBed	intrn	37764	38465	.	-	.	Parent=CGI_10005467;
	scaffold1052	WUBlastX	LTR_DIRS	37764	38465	182	-	.	.
scaffold1052	subtractBed	intrn	34967	35851	.	-	.	Parent=CGI_10005467;
	scaffold1052	WUBlastX	LTR_DIRS	34967	35851	388	-	.	.
scaffold1052	subtractBed	intrn	47243	47288	.	-	.	Parent=CGI_10005468;
	scaffold1052	TRF	Tandem_Repeat	47243	47288	53	+	.	.
scaffold1052	subtractBed	intrn	75979	77055	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_RTE-X	75979	77055	367	-	.	.
scaffold1052	subtractBed	intrn	74918	75502	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_L2	74918	75502	53	-	.	.
scaffold1052	subtractBed	intrn	78031	79116	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_RTE-X	78031	79116	373	-	.	.
scaffold1052	subtractBed	intrn	75143	75502	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_L2	75143	75502	109	-	.	.
scaffold1052	subtractBed	intrn	79154	79276	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_L2	79154	79276	27	-	.	.
scaffold1052	subtractBed	intrn	75044	75394	.	-	.	Parent=CGI_10005470;
	scaffold1052	WUBlastX	LINE_L2	75044	75394	87	-	.	.
scaffold1052	subtractBed	intrn	86404	86472	.	+	.	Parent=CGI_10005471;
	scaffold1052	TRF	Tandem_Repeat	86404	86472	52	+	.	.
scaffold1052	subtractBed	intrn	86716	86769	.	+	.	Parent=CGI_10005471;
	scaffold1052	TRF	Tandem_Repeat	86716	86769	74	+	.	.
scaffold1052	subtractBed	intrn	86715	86772	.	+	.	Parent=CGI_10005471;
	scaffold1052	TRF	Tandem_Repeat	86715	86772	91	+	.	.
scaffold1052	subtractBed	intrn	89725	90410	.	+	.	Parent=CGI_10005471;
	scaffold1052	TRF	Tandem_Repeat	89725	90410	1051	+	.	.
scaffold1052	subtractBed	intrn	110982	111687	.	+	.	Parent=CGI_10005472;
	scaffold1052	TRF	Tandem_Repeat	110982	111687	1047	+	.	.
scaffold1053	subtractBed	intrn	17465	17508	.	-	.	Parent=CGI_10014292;
	scaffold1053	TRF	Tandem_Repeat	17465	17508	61	+	.	.
scaffold1053	subtractBed	intrn	19562	20976	.	-	.	Parent=CGI_10014292;
	scaffold1053	TRF	Tandem_Repeat	19562	20976	1147	+	.	.
scaffold1053	subtractBed	intrn	19579	20976	.	-	.	Parent=CGI_10014292;
	scaffold1053	TRF	Tandem_Repeat	19579	20976	1019	+	.	.
scaffold1053	subtractBed	intrn	29672	29712	.	-	.	Parent=CGI_10014292;
	scaffold1053	TRF	Tandem_Repeat	29672	29712	82	+	.	.
scaffold1053	subtractBed	intrn	25832	26269	.	-	.	Parent=CGI_10014292;
	scaffold1053	WUBlastX	LINE_Penelope	25832	26269	24	+	.	.
scaffold1053	subtractBed	intrn	46267	46340	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	46267	46340	67	+	.	.
scaffold1053	subtractBed	intrn	46266	46353	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	46266	46353	167	+	.	.
scaffold1053	subtractBed	intrn	50380	50417	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	50380	50417	58	+	.	.
scaffold1053	subtractBed	intrn	59415	59457	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	59415	59457	50	+	.	.
scaffold1053	subtractBed	intrn	60813	60939	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	60813	60939	182	+	.	.
scaffold1053	subtractBed	intrn	71810	71934	.	+	.	Parent=CGI_10014293;
	scaffold1053	TRF	Tandem_Repeat	71810	71934	214	+	.	.
scaffold1053	subtractBed	intrn	150687	151608	.	-	.	Parent=CGI_10014295;
	scaffold1053	TRF	Tandem_Repeat	150687	151608	1192	+	.	.
scaffold1053	subtractBed	intrn	151814	151845	.	-	.	Parent=CGI_10014295;
	scaffold1053	TRF	Tandem_Repeat	151814	151845	55	+	.	.
scaffold1053	subtractBed	intrn	232802	233333	.	+	.	Parent=CGI_10014296;
	scaffold1053	TRF	Tandem_Repeat	232802	233333	839	+	.	.
scaffold1053	subtractBed	intrn	234236	234868	.	+	.	Parent=CGI_10014296;
	scaffold1053	TRF	Tandem_Repeat	234236	234868	615	+	.	.
scaffold1053	subtractBed	intrn	234243	234868	.	+	.	Parent=CGI_10014296;
	scaffold1053	TRF	Tandem_Repeat	234243	234868	735	+	.	.
scaffold1053	subtractBed	intrn	234241	234868	.	+	.	Parent=CGI_10014296;
	scaffold1053	TRF	Tandem_Repeat	234241	234868	802	+	.	.
scaffold1053	subtractBed	intrn	240982	241043	.	+	.	Parent=CGI_10014296;
	scaffold1053	TRF	Tandem_Repeat	240982	241043	90	+	.	.
scaffold1053	subtractBed	intrn	254139	254223	.	-	.	Parent=CGI_10014297;
	scaffold1053	TRF	Tandem_Repeat	254139	254223	152	+	.	.
scaffold1053	subtractBed	intrn	309358	309419	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	309358	309419	70	+	.	.
scaffold1053	subtractBed	intrn	318673	318824	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	318673	318824	177	+	.	.
scaffold1053	subtractBed	intrn	318634	318818	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	318634	318818	158	+	.	.
scaffold1053	subtractBed	intrn	319896	320246	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	319896	320246	214	+	.	.
scaffold1053	subtractBed	intrn	319896	320248	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	319896	320248	251	+	.	.
scaffold1053	subtractBed	intrn	319896	320249	.	-	.	Parent=CGI_10014298;
	scaffold1053	TRF	Tandem_Repeat	319896	320249	184	+	.	.
scaffold1053	subtractBed	intrn	328940	329182	.	-	.	Parent=CGI_10014298;
	scaffold1053	WUBlastX	LINE_RTE-X	328940	329182	54	+	.	.
scaffold1053	subtractBed	intrn	328725	328949	.	-	.	Parent=CGI_10014298;
	scaffold1053	WUBlastX	LINE_RTE-X	328725	328949	48	+	.	.
scaffold1053	subtractBed	intrn	328934	329065	.	-	.	Parent=CGI_10014298;
	scaffold1053	WUBlastX	LINE_RTE-X	328934	329065	68	+	.	.
scaffold1053	subtractBed	intrn	375965	376186	.	-	.	Parent=CGI_10014300;
	scaffold1053	TRF	Tandem_Repeat	375965	376186	340	+	.	.
scaffold1054	subtractBed	intrn	220657	220755	.	+	.	Parent=CGI_10012962;
	scaffold1054	TRF	Tandem_Repeat	220657	220755	119	+	.	.
scaffold1054	subtractBed	intrn	228203	228589	.	+	.	Parent=CGI_10012962;
	scaffold1054	TRF	Tandem_Repeat	228203	228589	461	+	.	.
scaffold1054	subtractBed	intrn	266281	266363	.	+	.	Parent=CGI_10012963;
	scaffold1054	TRF	Tandem_Repeat	266281	266363	136	+	.	.
scaffold1054	subtractBed	intrn	272000	272049	.	+	.	Parent=CGI_10012963;
	scaffold1054	TRF	Tandem_Repeat	272000	272049	55	+	.	.
scaffold1054	subtractBed	intrn	271999	272103	.	+	.	Parent=CGI_10012963;
	scaffold1054	TRF	Tandem_Repeat	271999	272103	63	+	.	.
scaffold1054	subtractBed	intrn	273321	273374	.	+	.	Parent=CGI_10012963;
	scaffold1054	TRF	Tandem_Repeat	273321	273374	90	+	.	.
scaffold1054	subtractBed	intrn	277098	277199	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	277098	277199	43	+	.	.
scaffold1054	subtractBed	intrn	277077	277199	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	277077	277199	39	+	.	.
scaffold1054	subtractBed	intrn	277567	277716	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	277567	277716	31	+	.	.
scaffold1054	subtractBed	intrn	278100	278204	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	278100	278204	45	+	.	.
scaffold1054	subtractBed	intrn	279694	279903	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	279694	279903	43	-	.	.
scaffold1054	subtractBed	intrn	279053	279589	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	279053	279589	297	-	.	.
scaffold1054	subtractBed	intrn	279056	279715	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_Kolobok-IS4	279056	279715	282	-	.	.
scaffold1054	subtractBed	intrn	278481	278702	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	278481	278702	61	+	.	.
scaffold1054	subtractBed	intrn	278514	278693	.	+	.	Parent=CGI_10012963;
	scaffold1054	WUBlastX	DNA_IS4EU	278514	278693	62	+	.	.
scaffold1054	subtractBed	intrn	282913	282946	.	+	.	Parent=CGI_10012963;
	scaffold1054	TRF	Tandem_Repeat	282913	282946	59	+	.	.
scaffold1054	subtractBed	intrn	277098	277199	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	277098	277199	43	+	.	.
scaffold1054	subtractBed	intrn	277077	277199	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	277077	277199	39	+	.	.
scaffold1054	subtractBed	intrn	277567	277716	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	277567	277716	31	+	.	.
scaffold1054	subtractBed	intrn	278100	278204	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	278100	278204	45	+	.	.
scaffold1054	subtractBed	intrn	279694	279903	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	279694	279903	43	-	.	.
scaffold1054	subtractBed	intrn	279053	279589	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	279053	279589	297	-	.	.
scaffold1054	subtractBed	intrn	279056	279715	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_Kolobok-IS4	279056	279715	282	-	.	.
scaffold1054	subtractBed	intrn	278481	278702	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	278481	278702	61	+	.	.
scaffold1054	subtractBed	intrn	278514	278693	.	-	.	Parent=CGI_10012964;
	scaffold1054	WUBlastX	DNA_IS4EU	278514	278693	62	+	.	.
scaffold1054	subtractBed	intrn	282913	282946	.	-	.	Parent=CGI_10012964;
	scaffold1054	TRF	Tandem_Repeat	282913	282946	59	+	.	.
scaffold1054	subtractBed	intrn	313203	313223	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	312999	313223	100	+	.	.
scaffold1054	subtractBed	intrn	315745	315957	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	315745	315957	125	+	.	.
scaffold1054	subtractBed	intrn	313203	313351	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	313193	313351	63	+	.	.
scaffold1054	subtractBed	intrn	313203	313205	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	312831	313205	77	+	.	.
scaffold1054	subtractBed	intrn	313351	315762	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	313351	315762	1402	+	.	.
scaffold1054	subtractBed	intrn	313203	313205	.	+	.	Parent=CGI_10012967;
	scaffold1054	WUBlastX	LINE_L2	312891	313205	85	+	.	.
scaffold1054	subtractBed	intrn	319201	319243	.	+	.	Parent=CGI_10012967;
	scaffold1054	TRF	Tandem_Repeat	319201	319243	77	+	.	.
scaffold1054	subtractBed	intrn	331822	331824	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	331129	331824	209	+	.	.
scaffold1054	subtractBed	intrn	332260	332496	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	332260	332496	79	+	.	.
scaffold1054	subtractBed	intrn	332122	332156	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	331938	332156	116	+	.	.
scaffold1054	subtractBed	intrn	332284	332553	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	332284	332553	62	+	.	.
scaffold1054	subtractBed	intrn	333036	333284	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	333036	333284	93	+	.	.
scaffold1054	subtractBed	intrn	332122	332523	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	332074	332523	62	+	.	.
scaffold1054	subtractBed	intrn	332850	333041	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	332850	333041	66	+	.	.
scaffold1054	subtractBed	intrn	332859	333011	.	+	.	Parent=CGI_10012969;
	scaffold1054	WUBlastX	DNA_Kolobok	332859	333011	88	+	.	.
scaffold1056	subtractBed	intrn	36627	36672	.	-	.	Parent=CGI_10010175;
	scaffold1056	TRF	Tandem_Repeat	36627	36672	92	+	.	.
scaffold1056	subtractBed	intrn	101554	101609	.	+	.	Parent=CGI_10010180;
	scaffold1056	TRF	Tandem_Repeat	101554	101609	112	+	.	.
scaffold1058	subtractBed	intrn	7317	7352	.	+	.	Parent=CGI_10004874;
	scaffold1058	TRF	Tandem_Repeat	7317	7352	54	+	.	.
scaffold1058	subtractBed	intrn	82221	82583	.	-	.	Parent=CGI_10004879;
	scaffold1058	WUBlastX	DNA_Harbinger	82221	82583	163	+	.	.
scaffold1058	subtractBed	intrn	89834	89997	.	-	.	Parent=CGI_10004879;
	scaffold1058	TRF	Tandem_Repeat	89834	89997	143	+	.	.
scaffold106	subtractBed	intrn	93111	93336	.	+	.	Parent=CGI_10022025;
	scaffold106	TRF	Tandem_Repeat	93111	93336	207	+	.	.
scaffold106	subtractBed	intrn	93102	93321	.	+	.	Parent=CGI_10022025;
	scaffold106	TRF	Tandem_Repeat	93102	93321	240	+	.	.
scaffold106	subtractBed	intrn	183607	184868	.	-	.	Parent=CGI_10022028;
	scaffold106	TRF	Tandem_Repeat	183607	184868	2337	+	.	.
scaffold106	subtractBed	intrn	190648	190674	.	-	.	Parent=CGI_10022028;
	scaffold106	TRF	Tandem_Repeat	190648	190674	54	+	.	.
scaffold106	subtractBed	intrn	226624	226711	.	+	.	Parent=CGI_10022031;
	scaffold106	WUBlastX	LTR_ERVK	226478	226711	28	+	.	.
scaffold106	subtractBed	intrn	231138	231172	.	+	.	Parent=CGI_10022031;
	scaffold106	TRF	Tandem_Repeat	231138	231172	70	+	.	.
scaffold106	subtractBed	intrn	233049	233096	.	+	.	Parent=CGI_10022031;
	scaffold106	TRF	Tandem_Repeat	233049	233096	96	+	.	.
scaffold106	subtractBed	intrn	235359	235411	.	+	.	Parent=CGI_10022031;
	scaffold106	TRF	Tandem_Repeat	235359	235411	54	+	.	.
scaffold106	subtractBed	intrn	278824	279541	.	-	.	Parent=CGI_10022035;
	scaffold106	TRF	Tandem_Repeat	278824	279560	990	+	.	.
scaffold106	subtractBed	intrn	302093	302180	.	-	.	Parent=CGI_10022037;
	scaffold106	TRF	Tandem_Repeat	302093	302180	140	+	.	.
scaffold106	subtractBed	intrn	316010	316064	.	-	.	Parent=CGI_10022039;
	scaffold106	TRF	Tandem_Repeat	316010	316064	83	+	.	.
scaffold106	subtractBed	intrn	328666	328883	.	-	.	Parent=CGI_10022039;
	scaffold106	TRF	Tandem_Repeat	328666	328883	252	+	.	.
scaffold106	subtractBed	intrn	329359	329732	.	-	.	Parent=CGI_10022039;
	scaffold106	TRF	Tandem_Repeat	329359	329732	266	+	.	.
scaffold106	subtractBed	intrn	329359	329731	.	-	.	Parent=CGI_10022039;
	scaffold106	TRF	Tandem_Repeat	329359	329731	344	+	.	.
scaffold106	subtractBed	intrn	339365	339415	.	-	.	Parent=CGI_10022040;
	scaffold106	TRF	Tandem_Repeat	339365	339415	102	+	.	.
scaffold106	subtractBed	intrn	362692	362749	.	+	.	Parent=CGI_10022042;
	scaffold106	TRF	Tandem_Repeat	362692	362749	77	+	.	.
scaffold106	subtractBed	intrn	404286	404470	.	-	.	Parent=CGI_10022043;
	scaffold106	TRF	Tandem_Repeat	404286	404470	298	+	.	.
scaffold106	subtractBed	intrn	426046	426091	.	-	.	Parent=CGI_10022045;
	scaffold106	TRF	Tandem_Repeat	426046	426091	92	+	.	.
scaffold106	subtractBed	intrn	502281	502411	.	-	.	Parent=CGI_10022047;
	scaffold106	TRF	Tandem_Repeat	502281	502411	136	+	.	.
scaffold106	subtractBed	intrn	607797	607909	.	+	.	Parent=CGI_10022049;
	scaffold106	TRF	Tandem_Repeat	607797	607909	190	+	.	.
scaffold106	subtractBed	intrn	627347	627378	.	-	.	Parent=CGI_10022050;
	scaffold106	TRF	Tandem_Repeat	627347	627378	55	+	.	.
scaffold106	subtractBed	intrn	653681	653748	.	-	.	Parent=CGI_10022052;
	scaffold106	TRF	Tandem_Repeat	653681	653748	100	+	.	.
scaffold106	subtractBed	intrn	653521	653661	.	-	.	Parent=CGI_10022052;
	scaffold106	WUBlastX	LTR_Gypsy	653521	653661	28	-	.	.
scaffold106	subtractBed	intrn	654740	654982	.	-	.	Parent=CGI_10022052;
	scaffold106	WUBlastX	LTR_Gypsy	654740	654982	26	-	.	.
scaffold106	subtractBed	intrn	654779	654970	.	-	.	Parent=CGI_10022052;
	scaffold106	WUBlastX	LTR_Gypsy	654779	654970	28	-	.	.
scaffold106	subtractBed	intrn	689033	689173	.	+	.	Parent=CGI_10022056;
	scaffold106	TRF	Tandem_Repeat	689033	689173	117	+	.	.
scaffold1061	subtractBed	intrn	139064	139119	.	-	.	Parent=CGI_10017245;
	scaffold1061	TRF	Tandem_Repeat	139064	139119	112	+	.	.
scaffold1061	subtractBed	intrn	141887	141963	.	-	.	Parent=CGI_10017245;
	scaffold1061	TRF	Tandem_Repeat	141887	141963	147	+	.	.
scaffold1061	subtractBed	intrn	196736	196980	.	-	.	Parent=CGI_10017247;
	scaffold1061	TRF	Tandem_Repeat	196736	196980	113	+	.	.
scaffold1061	subtractBed	intrn	197035	197439	.	-	.	Parent=CGI_10017247;
	scaffold1061	TRF	Tandem_Repeat	197035	197442	400	+	.	.
scaffold1061	subtractBed	intrn	198358	198406	.	-	.	Parent=CGI_10017247;
	scaffold1061	TRF	Tandem_Repeat	198358	198406	98	+	.	.
scaffold1061	subtractBed	intrn	199785	199818	.	-	.	Parent=CGI_10017247;
	scaffold1061	TRF	Tandem_Repeat	199785	199818	68	+	.	.
scaffold1061	subtractBed	intrn	226598	226732	.	-	.	Parent=CGI_10017248;
	scaffold1061	WUBlastX	LTR_Gypsy	226598	226732	22	-	.	.
scaffold1061	subtractBed	intrn	237611	237678	.	-	.	Parent=CGI_10017250;
	scaffold1061	TRF	Tandem_Repeat	237611	237678	57	+	.	.
scaffold1061	subtractBed	intrn	245156	245219	.	+	.	Parent=CGI_10017251;
	scaffold1061	TRF	Tandem_Repeat	245156	245219	128	+	.	.
scaffold1061	subtractBed	intrn	253628	253768	.	+	.	Parent=CGI_10017251;
	scaffold1061	WUBlastX	LTR_Caulimoviru	252992	253768	34	-	.	.
scaffold1061	subtractBed	intrn	267757	267809	.	+	.	Parent=CGI_10017251;
	scaffold1061	TRF	Tandem_Repeat	267757	267809	79	+	.	.
scaffold1061	subtractBed	intrn	273666	274782	.	+	.	Parent=CGI_10017251;
	scaffold1061	TRF	Tandem_Repeat	273666	274782	1483	+	.	.
scaffold1061	subtractBed	intrn	253628	253768	.	-	.	Parent=CGI_10017252;
	scaffold1061	WUBlastX	LTR_Caulimoviru	252992	253768	34	-	.	.
scaffold1061	subtractBed	intrn	313530	313575	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	313530	313575	92	+	.	.
scaffold1061	subtractBed	intrn	313608	313663	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	313608	313663	60	+	.	.
scaffold1061	subtractBed	intrn	313608	313665	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	313608	313665	54	+	.	.
scaffold1061	subtractBed	intrn	330194	330237	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	330194	330237	88	+	.	.
scaffold1061	subtractBed	intrn	333824	333877	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	333824	333877	74	+	.	.
scaffold1061	subtractBed	intrn	334013	334048	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	334013	334048	72	+	.	.
scaffold1061	subtractBed	intrn	337542	337591	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	337542	337591	100	+	.	.
scaffold1061	subtractBed	intrn	338329	338363	.	-	.	Parent=CGI_10017253;
	scaffold1061	TRF	Tandem_Repeat	338329	338363	70	+	.	.
scaffold1061	subtractBed	intrn	352586	352646	.	+	.	Parent=CGI_10017254;
	scaffold1061	TRF	Tandem_Repeat	352586	352646	122	+	.	.
scaffold1061	subtractBed	intrn	364200	364245	.	+	.	Parent=CGI_10017254;
	scaffold1061	TRF	Tandem_Repeat	364200	364245	92	+	.	.
scaffold1061	subtractBed	intrn	391859	391896	.	-	.	Parent=CGI_10017255;
	scaffold1061	TRF	Tandem_Repeat	391859	391896	51	+	.	.
scaffold1061	subtractBed	intrn	472830	472980	.	+	.	Parent=CGI_10017259;
	scaffold1061	TRF	Tandem_Repeat	472830	472980	241	+	.	.
scaffold1061	subtractBed	intrn	491778	491826	.	-	.	Parent=CGI_10017261;
	scaffold1061	TRF	Tandem_Repeat	491778	491826	98	+	.	.
scaffold1062	subtractBed	intrn	9104	9529	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_CR1	9104	9529	129	+	.	.
scaffold1062	subtractBed	intrn	9098	9613	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_CR1-L2	9098	9613	31	+	.	.
scaffold1062	subtractBed	intrn	8793	9104	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_CR1	8793	9104	152	+	.	.
scaffold1062	subtractBed	intrn	8650	8805	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_CR1	8650	8805	139	+	.	.
scaffold1062	subtractBed	intrn	8611	8805	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_CR1	8611	8805	107	+	.	.
scaffold1062	subtractBed	intrn	8530	8805	.	-	.	Parent=CGI_10005737;
	scaffold1062	WUBlastX	LINE_L2	8530	8805	73	+	.	.
scaffold1062	subtractBed	intrn	11898	11991	.	-	.	Parent=CGI_10005737;
	scaffold1062	TRF	Tandem_Repeat	11898	11991	111	+	.	.
scaffold1062	subtractBed	intrn	13953	14011	.	-	.	Parent=CGI_10005737;
	scaffold1062	TRF	Tandem_Repeat	13953	14011	50	+	.	.
scaffold1062	subtractBed	intrn	70442	70486	.	+	.	Parent=CGI_10005741;
	scaffold1062	TRF	Tandem_Repeat	70442	70486	90	+	.	.
scaffold1062	subtractBed	intrn	76116	76182	.	+	.	Parent=CGI_10005741;
	scaffold1062	TRF	Tandem_Repeat	76116	76182	89	+	.	.
scaffold1062	subtractBed	intrn	76703	76789	.	+	.	Parent=CGI_10005741;
	scaffold1062	TRF	Tandem_Repeat	76703	76789	129	+	.	.
scaffold1062	subtractBed	intrn	76968	77024	.	+	.	Parent=CGI_10005741;
	scaffold1062	TRF	Tandem_Repeat	76968	77024	114	+	.	.
scaffold1062	subtractBed	intrn	79393	79459	.	+	.	Parent=CGI_10005741;
	scaffold1062	TRF	Tandem_Repeat	79393	79459	89	+	.	.
scaffold1062	subtractBed	intrn	75968	76102	.	+	.	Parent=CGI_10005741;
	scaffold1062	WUBlastX	LTR_Gypsy	75968	76102	85	+	.	.
scaffold1062	subtractBed	intrn	100824	101606	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	100824	101606	132	-	.	.
scaffold1062	subtractBed	intrn	107220	108275	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	DNA_Crypton	107220	108275	172	+	.	.
scaffold1062	subtractBed	intrn	100758	100791	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	100357	100791	158	-	.	.
scaffold1062	subtractBed	intrn	104175	104639	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	104175	104639	292	-	.	.
scaffold1062	subtractBed	intrn	100973	101899	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	100973	101899	280	-	.	.
scaffold1062	subtractBed	intrn	101848	103113	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	101848	103113	664	-	.	.
scaffold1062	subtractBed	intrn	103638	104633	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	103638	104633	280	-	.	.
scaffold1062	subtractBed	intrn	104654	104827	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	LTR_Gypsy-Troyk	104654	104827	109	-	.	.
scaffold1062	subtractBed	intrn	107436	108287	.	-	.	Parent=CGI_10005742;
	scaffold1062	WUBlastX	DNA_Crypton	107436	108287	188	+	.	.
scaffold1064	subtractBed	intrn	21181	21221	.	-	.	Parent=CGI_10006532;
	scaffold1064	TRF	Tandem_Repeat	21181	21221	50	+	.	.
scaffold1064	subtractBed	intrn	23245	23450	.	-	.	Parent=CGI_10006532;
	scaffold1064	TRF	Tandem_Repeat	23245	23450	304	+	.	.
scaffold1064	subtractBed	intrn	47561	47619	.	+	.	Parent=CGI_10006535;
	scaffold1064	TRF	Tandem_Repeat	47561	47619	118	+	.	.
scaffold1064	subtractBed	intrn	48262	48295	.	+	.	Parent=CGI_10006535;
	scaffold1064	TRF	Tandem_Repeat	48262	48295	54	+	.	.
scaffold1064	subtractBed	intrn	55420	55660	.	-	.	Parent=CGI_10006536;
	scaffold1064	TRF	Tandem_Repeat	55420	55660	313	+	.	.
scaffold1064	subtractBed	intrn	56528	56768	.	-	.	Parent=CGI_10006536;
	scaffold1064	TRF	Tandem_Repeat	56528	56768	311	+	.	.
scaffold1064	subtractBed	intrn	92327	92366	.	-	.	Parent=CGI_10006539;
	scaffold1064	TRF	Tandem_Repeat	92327	92366	71	+	.	.
scaffold1066	subtractBed	intrn	169555	170643	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	169555	170643	365	+	.	.
scaffold1066	subtractBed	intrn	170263	170712	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	170263	170712	190	+	.	.
scaffold1066	subtractBed	intrn	169951	170910	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	169951	170910	150	+	.	.
scaffold1066	subtractBed	intrn	169024	169806	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	169024	169806	70	+	.	.
scaffold1066	subtractBed	intrn	169357	170625	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	169357	170625	176	+	.	.
scaffold1066	subtractBed	intrn	168620	169012	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy-Cigr	168620	169012	131	+	.	.
scaffold1066	subtractBed	intrn	169258	169797	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Copia	169258	169797	71	+	.	.
scaffold1066	subtractBed	intrn	172498	172539	.	+	.	Parent=CGI_10012659;
	scaffold1066	TRF	Tandem_Repeat	172498	172539	84	+	.	.
scaffold1066	subtractBed	intrn	176826	177557	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	176826	177557	260	-	.	.
scaffold1066	subtractBed	intrn	175750	175944	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Copia	175750	175944	37	+	.	.
scaffold1066	subtractBed	intrn	179377	179772	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	179377	179772	55	-	.	.
scaffold1066	subtractBed	intrn	173339	175291	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	173339	175291	1282	+	.	.
scaffold1066	subtractBed	intrn	177511	177648	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	177511	177648	21	-	.	.
scaffold1066	subtractBed	intrn	179720	179902	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	179720	179902	42	-	.	.
scaffold1066	subtractBed	intrn	175234	175806	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy-Cigr	175234	175806	333	+	.	.
scaffold1066	subtractBed	intrn	177666	179297	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	177666	179297	817	-	.	.
scaffold1066	subtractBed	intrn	179311	179730	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	179311	179730	25	-	.	.
scaffold1066	subtractBed	intrn	179464	179769	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Ngaro	179464	179769	129	-	.	.
scaffold1066	subtractBed	intrn	175237	175908	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	175237	175908	203	+	.	.
scaffold1066	subtractBed	intrn	173189	174151	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Gypsy	173189	174151	342	+	.	.
scaffold1066	subtractBed	intrn	180934	181274	.	+	.	Parent=CGI_10012659;
	scaffold1066	TRF	Tandem_Repeat	180934	181274	233	+	.	.
scaffold1066	subtractBed	intrn	193109	193310	.	+	.	Parent=CGI_10012659;
	scaffold1066	TRF	Tandem_Repeat	193109	193310	181	+	.	.
scaffold1066	subtractBed	intrn	193926	194099	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Pao	193926	194099	23	-	.	.
scaffold1066	subtractBed	intrn	192745	193107	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Pao	192745	193107	80	-	.	.
scaffold1066	subtractBed	intrn	193367	193852	.	+	.	Parent=CGI_10012659;
	scaffold1066	WUBlastX	LTR_Pao	193367	193852	129	-	.	.
scaffold1066	subtractBed	intrn	275772	275856	.	+	.	Parent=CGI_10012662;
	scaffold1066	TRF	Tandem_Repeat	275772	275856	131	+	.	.
scaffold1067	subtractBed	intrn	16547	16920	.	-	.	Parent=CGI_10004779;
	scaffold1067	TRF	Tandem_Repeat	16547	16920	434	+	.	.
scaffold1067	subtractBed	intrn	21189	21378	.	-	.	Parent=CGI_10004779;
	scaffold1067	TRF	Tandem_Repeat	21189	21387	283	+	.	.
scaffold1067	subtractBed	intrn	27820	27856	.	-	.	Parent=CGI_10004779;
	scaffold1067	TRF	Tandem_Repeat	27820	27856	74	+	.	.
scaffold1067	subtractBed	intrn	33181	33225	.	-	.	Parent=CGI_10004779;
	scaffold1067	TRF	Tandem_Repeat	33181	33225	54	+	.	.
scaffold1067	subtractBed	intrn	102862	102923	.	-	.	Parent=CGI_10004783;
	scaffold1067	TRF	Tandem_Repeat	102862	102923	97	+	.	.
scaffold1067	subtractBed	intrn	98982	100034	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_En-Spm	98982	100034	247	+	.	.
scaffold1067	subtractBed	intrn	99666	100829	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_En-Spm	99666	100829	276	+	.	.
scaffold1067	subtractBed	intrn	102554	102847	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	102554	102847	32	-	.	.
scaffold1067	subtractBed	intrn	102989	103177	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	102989	103177	63	-	.	.
scaffold1067	subtractBed	intrn	103426	103674	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	103426	103674	104	-	.	.
scaffold1067	subtractBed	intrn	103815	104132	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	103815	104132	217	-	.	.
scaffold1067	subtractBed	intrn	101971	102387	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	101971	102387	86	-	.	.
scaffold1067	subtractBed	intrn	102599	102775	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	102599	102775	107	-	.	.
scaffold1067	subtractBed	intrn	104287	104616	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	104287	104616	44	-	.	.
scaffold1067	subtractBed	intrn	101968	102288	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	101968	102288	124	-	.	.
scaffold1067	subtractBed	intrn	98805	99824	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_En-Spm	98805	99824	98	+	.	.
scaffold1067	subtractBed	intrn	103040	103210	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	103040	103210	44	-	.	.
scaffold1067	subtractBed	intrn	103863	104180	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	103863	104180	25	-	.	.
scaffold1067	subtractBed	intrn	102554	102739	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	DNA_Sola	102554	102739	34	-	.	.
scaffold1067	subtractBed	intrn	107559	107942	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1-Tx1	107559	107942	152	-	.	.
scaffold1067	subtractBed	intrn	107490	107942	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1-Tx1	107490	107942	61	-	.	.
scaffold1067	subtractBed	intrn	108034	108411	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1-Tx1	108034	108411	76	-	.	.
scaffold1067	subtractBed	intrn	108034	108327	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1-Tx1	108034	108327	97	-	.	.
scaffold1067	subtractBed	intrn	108025	108489	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1	108025	108489	73	-	.	.
scaffold1067	subtractBed	intrn	107568	108026	.	-	.	Parent=CGI_10004783;
	scaffold1067	WUBlastX	LINE_L1-Tx1	107568	108026	145	-	.	.
scaffold107	subtractBed	intrn	13903	13945	.	-	.	Parent=CGI_10025039;
	scaffold107	TRF	Tandem_Repeat	13903	13945	77	+	.	.
scaffold107	subtractBed	intrn	47162	47213	.	-	.	Parent=CGI_10025040;
	scaffold107	TRF	Tandem_Repeat	47162	47213	70	+	.	.
scaffold107	subtractBed	intrn	135482	135622	.	-	.	Parent=CGI_10025044;
	scaffold107	WUBlastX	RC_Helitron	135482	135763	86	-	.	.
scaffold107	subtractBed	intrn	135762	135763	.	-	.	Parent=CGI_10025044;
	scaffold107	WUBlastX	RC_Helitron	135482	135763	86	-	.	.
scaffold107	subtractBed	intrn	143553	143597	.	-	.	Parent=CGI_10025044;
	scaffold107	TRF	Tandem_Repeat	143553	143597	90	+	.	.
scaffold107	subtractBed	intrn	309428	309475	.	+	.	Parent=CGI_10025050;
	scaffold107	TRF	Tandem_Repeat	309428	309475	69	+	.	.
scaffold107	subtractBed	intrn	310526	310621	.	+	.	Parent=CGI_10025050;
	scaffold107	TRF	Tandem_Repeat	310526	310621	183	+	.	.
scaffold107	subtractBed	intrn	315103	315212	.	+	.	Parent=CGI_10025050;
	scaffold107	TRF	Tandem_Repeat	315103	315212	143	+	.	.
scaffold107	subtractBed	intrn	329216	329254	.	+	.	Parent=CGI_10025051;
	scaffold107	TRF	Tandem_Repeat	329216	329254	78	+	.	.
scaffold107	subtractBed	intrn	458504	458533	.	-	.	Parent=CGI_10025055;
	scaffold107	TRF	Tandem_Repeat	458504	458533	51	+	.	.
scaffold107	subtractBed	intrn	458823	459569	.	-	.	Parent=CGI_10025055;
	scaffold107	WUBlastX	LINE_RTE-X	458823	459569	233	-	.	.
scaffold107	subtractBed	intrn	458823	459815	.	-	.	Parent=CGI_10025055;
	scaffold107	WUBlastX	LINE_RTE-X	458823	459815	148	-	.	.
scaffold107	subtractBed	intrn	460621	460669	.	-	.	Parent=CGI_10025055;
	scaffold107	TRF	Tandem_Repeat	460621	460669	98	+	.	.
scaffold107	subtractBed	intrn	464390	464414	.	-	.	Parent=CGI_10025055;
	scaffold107	TRF	Tandem_Repeat	464390	464414	50	+	.	.
scaffold107	subtractBed	intrn	488484	488533	.	+	.	Parent=CGI_10025056;
	scaffold107	TRF	Tandem_Repeat	488484	488533	100	+	.	.
scaffold107	subtractBed	intrn	513892	513942	.	-	.	Parent=CGI_10025057;
	scaffold107	TRF	Tandem_Repeat	513892	513942	56	+	.	.
scaffold107	subtractBed	intrn	513892	513950	.	-	.	Parent=CGI_10025057;
	scaffold107	TRF	Tandem_Repeat	513892	513950	52	+	.	.
scaffold107	subtractBed	intrn	514791	514843	.	-	.	Parent=CGI_10025057;
	scaffold107	TRF	Tandem_Repeat	514791	514843	52	+	.	.
scaffold107	subtractBed	intrn	517665	517703	.	+	.	Parent=CGI_10025058;
	scaffold107	TRF	Tandem_Repeat	517665	517703	78	+	.	.
scaffold107	subtractBed	intrn	541735	541770	.	-	.	Parent=CGI_10025059;
	scaffold107	TRF	Tandem_Repeat	541735	541770	54	+	.	.
scaffold107	subtractBed	intrn	551638	551982	.	+	.	Parent=CGI_10025060;
	scaffold107	WUBlastX	LTR_Pao	551638	551982	58	-	.	.
scaffold107	subtractBed	intrn	551668	552039	.	+	.	Parent=CGI_10025060;
	scaffold107	WUBlastX	LTR_Pao	551668	552039	29	-	.	.
scaffold107	subtractBed	intrn	555649	555696	.	+	.	Parent=CGI_10025060;
	scaffold107	TRF	Tandem_Repeat	555649	555696	60	+	.	.
scaffold107	subtractBed	intrn	569640	569676	.	+	.	Parent=CGI_10025062;
	scaffold107	TRF	Tandem_Repeat	569640	569676	74	+	.	.
scaffold107	subtractBed	intrn	570890	570935	.	+	.	Parent=CGI_10025062;
	scaffold107	TRF	Tandem_Repeat	570890	570935	92	+	.	.
scaffold107	subtractBed	intrn	571307	571344	.	+	.	Parent=CGI_10025062;
	scaffold107	TRF	Tandem_Repeat	571307	571344	60	+	.	.
scaffold107	subtractBed	intrn	572773	572974	.	+	.	Parent=CGI_10025062;
	scaffold107	TRF	Tandem_Repeat	572773	572974	84	+	.	.
scaffold107	subtractBed	intrn	602989	603048	.	-	.	Parent=CGI_10025066;
	scaffold107	TRF	Tandem_Repeat	602989	603048	120	+	.	.
scaffold107	subtractBed	intrn	603112	603141	.	-	.	Parent=CGI_10025066;
	scaffold107	TRF	Tandem_Repeat	603112	603141	60	+	.	.
scaffold107	subtractBed	intrn	631674	631739	.	-	.	Parent=CGI_10025068;
	scaffold107	TRF	Tandem_Repeat	631674	631739	123	+	.	.
scaffold107	subtractBed	intrn	634153	634188	.	-	.	Parent=CGI_10025068;
	scaffold107	TRF	Tandem_Repeat	634153	634188	63	+	.	.
scaffold107	subtractBed	intrn	693305	693335	.	+	.	Parent=CGI_10025073;
	scaffold107	TRF	Tandem_Repeat	693305	693335	53	+	.	.
scaffold107	subtractBed	intrn	981127	981830	.	-	.	Parent=CGI_10025077;
	scaffold107	TRF	Tandem_Repeat	981127	981830	855	+	.	.
scaffold107	subtractBed	intrn	983250	983605	.	-	.	Parent=CGI_10025077;
	scaffold107	TRF	Tandem_Repeat	983250	983605	358	+	.	.
scaffold107	subtractBed	intrn	1012629	1012691	.	+	.	Parent=CGI_10025080;
	scaffold107	TRF	Tandem_Repeat	1012629	1012691	60	+	.	.
scaffold107	subtractBed	intrn	1016300	1016349	.	+	.	Parent=CGI_10025080;
	scaffold107	TRF	Tandem_Repeat	1016300	1016349	57	+	.	.
scaffold107	subtractBed	intrn	1016522	1017267	.	+	.	Parent=CGI_10025080;
	scaffold107	TRF	Tandem_Repeat	1016522	1017267	1223	+	.	.
scaffold1070	subtractBed	intrn	11779	11842	.	-	.	Parent=CGI_10004514;
	scaffold1070	TRF	Tandem_Repeat	11779	11842	128	+	.	.
scaffold1070	subtractBed	intrn	28239	28415	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	28239	28415	293	+	.	.
scaffold1070	subtractBed	intrn	29649	29674	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	29649	29674	52	+	.	.
scaffold1070	subtractBed	intrn	29791	30533	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	29791	30533	1000	+	.	.
scaffold1070	subtractBed	intrn	31419	31550	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	31419	31550	52	+	.	.
scaffold1070	subtractBed	intrn	35298	35430	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	35298	35430	92	+	.	.
scaffold1070	subtractBed	intrn	39017	39305	.	+	.	Parent=CGI_10004515;
	scaffold1070	TRF	Tandem_Repeat	39017	39305	506	+	.	.
scaffold1070	subtractBed	intrn	57572	57611	.	-	.	Parent=CGI_10004518;
	scaffold1070	TRF	Tandem_Repeat	57572	57611	57	+	.	.
scaffold1070	subtractBed	intrn	57574	57608	.	-	.	Parent=CGI_10004518;
	scaffold1070	TRF	Tandem_Repeat	57574	57608	61	+	.	.
scaffold1070	subtractBed	intrn	70223	70280	.	-	.	Parent=CGI_10004519;
	scaffold1070	TRF	Tandem_Repeat	70223	70280	73	+	.	.
scaffold1070	subtractBed	intrn	70235	70280	.	-	.	Parent=CGI_10004519;
	scaffold1070	TRF	Tandem_Repeat	70235	70280	65	+	.	.
scaffold1070	subtractBed	intrn	70223	70280	.	-	.	Parent=CGI_10004519;
	scaffold1070	TRF	Tandem_Repeat	70223	70280	73	+	.	.
scaffold1070	subtractBed	intrn	90390	90447	.	-	.	Parent=CGI_10004521;
	scaffold1070	TRF	Tandem_Repeat	90390	90447	107	+	.	.
scaffold1070	subtractBed	intrn	95927	96769	.	-	.	Parent=CGI_10004521;
	scaffold1070	WUBlastX	LINE_L2	95927	96769	233	-	.	.
scaffold1070	subtractBed	intrn	95756	96745	.	-	.	Parent=CGI_10004521;
	scaffold1070	WUBlastX	LINE_CR1	95756	96745	141	-	.	.
scaffold1070	subtractBed	intrn	96873	96944	.	-	.	Parent=CGI_10004521;
	scaffold1070	WUBlastX	LINE_L2	96873	96944	23	-	.	.
scaffold1077	subtractBed	intrn	111959	112081	.	+	.	Parent=CGI_10017824;
	scaffold1077	TRF	Tandem_Repeat	111959	112081	80	+	.	.
scaffold1077	subtractBed	intrn	111975	112097	.	+	.	Parent=CGI_10017824;
	scaffold1077	TRF	Tandem_Repeat	111975	112097	176	+	.	.
scaffold1077	subtractBed	intrn	113651	113681	.	+	.	Parent=CGI_10017824;
	scaffold1077	TRF	Tandem_Repeat	113651	113681	53	+	.	.
scaffold1077	subtractBed	intrn	115355	115535	.	+	.	Parent=CGI_10017824;
	scaffold1077	TRF	Tandem_Repeat	115355	115535	265	+	.	.
scaffold1077	subtractBed	intrn	119534	119609	.	+	.	Parent=CGI_10017824;
	scaffold1077	TRF	Tandem_Repeat	119534	119609	116	+	.	.
scaffold1077	subtractBed	intrn	347420	351349	.	+	.	Parent=CGI_10017829;
	scaffold1077	WUBlastX	LTR_Gypsy	347420	351349	2705	+	.	.
scaffold1077	subtractBed	intrn	360264	360303	.	+	.	Parent=CGI_10017829;
	scaffold1077	TRF	Tandem_Repeat	360264	360303	59	+	.	.
scaffold1077	subtractBed	intrn	365091	365366	.	+	.	Parent=CGI_10017829;
	scaffold1077	WUBlastX	DNA_Kolobok-IS4	365091	365366	101	-	.	.
scaffold1077	subtractBed	intrn	390209	390254	.	+	.	Parent=CGI_10017830;
	scaffold1077	TRF	Tandem_Repeat	390209	390254	92	+	.	.
scaffold1077	subtractBed	intrn	392066	392090	.	+	.	Parent=CGI_10017830;
	scaffold1077	TRF	Tandem_Repeat	392066	392090	50	+	.	.
scaffold1077	subtractBed	intrn	393723	393768	.	+	.	Parent=CGI_10017830;
	scaffold1077	TRF	Tandem_Repeat	393723	393768	65	+	.	.
scaffold1078	subtractBed	intrn	20466	20583	.	+	.	Parent=CGI_10004751;
	scaffold1078	TRF	Tandem_Repeat	20466	20583	141	+	.	.
scaffold1078	subtractBed	intrn	35804	35845	.	+	.	Parent=CGI_10004752;
	scaffold1078	TRF	Tandem_Repeat	35804	35845	84	+	.	.
scaffold1078	subtractBed	intrn	41859	41926	.	+	.	Parent=CGI_10004752;
	scaffold1078	TRF	Tandem_Repeat	41859	41926	66	+	.	.
scaffold1080	subtractBed	intrn	7519	7558	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	7519	7558	71	+	.	.
scaffold1080	subtractBed	intrn	7558	7588	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	7558	7588	62	+	.	.
scaffold1080	subtractBed	intrn	9004	9070	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	9004	9070	71	+	.	.
scaffold1080	subtractBed	intrn	12155	12206	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	12155	12206	77	+	.	.
scaffold1080	subtractBed	intrn	23061	23104	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	23061	23104	63	+	.	.
scaffold1080	subtractBed	intrn	23071	23100	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	23071	23100	53	+	.	.
scaffold1080	subtractBed	intrn	24884	25116	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	24884	25116	339	+	.	.
scaffold1080	subtractBed	intrn	24884	25116	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	24884	25116	389	+	.	.
scaffold1080	subtractBed	intrn	25969	26221	.	-	.	Parent=CGI_10012664;
	scaffold1080	TRF	Tandem_Repeat	25969	26221	359	+	.	.
scaffold1080	subtractBed	intrn	77391	77732	.	+	.	Parent=CGI_10012668;
	scaffold1080	TRF	Tandem_Repeat	77391	77732	276	+	.	.
scaffold1080	subtractBed	intrn	77970	78028	.	+	.	Parent=CGI_10012668;
	scaffold1080	TRF	Tandem_Repeat	77970	78028	118	+	.	.
scaffold1080	subtractBed	intrn	89510	89559	.	-	.	Parent=CGI_10012670;
	scaffold1080	TRF	Tandem_Repeat	89510	89559	91	+	.	.
scaffold1080	subtractBed	intrn	112107	112172	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	112107	112172	80	+	.	.
scaffold1080	subtractBed	intrn	112107	112172	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	112107	112172	98	+	.	.
scaffold1080	subtractBed	intrn	117651	117832	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	117651	117832	292	+	.	.
scaffold1080	subtractBed	intrn	117659	117840	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	117659	117840	291	+	.	.
scaffold1080	subtractBed	intrn	117651	117840	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	117651	117840	371	+	.	.
scaffold1080	subtractBed	intrn	118272	118646	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	118269	118646	575	+	.	.
scaffold1080	subtractBed	intrn	120122	120453	.	+	.	Parent=CGI_10012671;
	scaffold1080	TRF	Tandem_Repeat	120122	120453	391	+	.	.
scaffold1080	subtractBed	intrn	148635	148651	.	+	.	Parent=CGI_10012673;
	scaffold1080	WUBlastX	DNA_TcMar-Tc2	148436	148651	40	+	.	.
scaffold1080	subtractBed	intrn	149030	149237	.	+	.	Parent=CGI_10012673;
	scaffold1080	WUBlastX	DNA_TcMar-Tc2	149001	149237	31	+	.	.
scaffold1080	subtractBed	intrn	149064	149240	.	+	.	Parent=CGI_10012673;
	scaffold1080	WUBlastX	DNA_TcMar-Tc2	149064	149240	82	+	.	.
scaffold1080	subtractBed	intrn	263365	264198	.	-	.	Parent=CGI_10012678;
	scaffold1080	WUBlastX	DNA_En-Spm	263365	264198	25	-	.	.
scaffold1080	subtractBed	intrn	262475	263020	.	-	.	Parent=CGI_10012678;
	scaffold1080	WUBlastX	DNA_En-Spm	262475	263020	169	-	.	.
scaffold1080	subtractBed	intrn	264207	264248	.	-	.	Parent=CGI_10012678;
	scaffold1080	WUBlastX	DNA_En-Spm	264207	264248	28	-	.	.
scaffold1080	subtractBed	intrn	263131	264048	.	-	.	Parent=CGI_10012678;
	scaffold1080	WUBlastX	DNA_En-Spm	263131	264048	255	-	.	.
scaffold1080	subtractBed	intrn	262091	263065	.	-	.	Parent=CGI_10012678;
	scaffold1080	WUBlastX	DNA_En-Spm	262091	263065	138	-	.	.
scaffold1080	subtractBed	intrn	280054	281090	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	280054	281090	1723	+	.	.
scaffold1080	subtractBed	intrn	282930	283235	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	282930	283235	513	+	.	.
scaffold1080	subtractBed	intrn	283256	284111	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	283256	284111	416	+	.	.
scaffold1080	subtractBed	intrn	283303	283742	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	283303	283742	283	+	.	.
scaffold1080	subtractBed	intrn	283840	283909	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	283840	283909	60	+	.	.
scaffold1080	subtractBed	intrn	283894	284135	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	283894	284135	322	+	.	.
scaffold1080	subtractBed	intrn	286438	286488	.	-	.	Parent=CGI_10012679;
	scaffold1080	TRF	Tandem_Repeat	286438	286488	84	+	.	.
scaffold1080	subtractBed	intrn	306185	306303	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	306185	306303	127	+	.	.
scaffold1080	subtractBed	intrn	307825	308057	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	307825	308057	231	+	.	.
scaffold1080	subtractBed	intrn	307818	308057	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	307818	308057	223	+	.	.
scaffold1080	subtractBed	intrn	325113	325161	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	325113	325161	98	+	.	.
scaffold1080	subtractBed	intrn	334472	334641	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	334472	334641	159	+	.	.
scaffold1080	subtractBed	intrn	334721	334761	.	-	.	Parent=CGI_10012680;
	scaffold1080	TRF	Tandem_Repeat	334721	334761	64	+	.	.
scaffold1081	subtractBed	intrn	90962	91000	.	+	.	Parent=CGI_10007683;
	scaffold1081	TRF	Tandem_Repeat	90962	91000	51	+	.	.
scaffold1081	subtractBed	intrn	90966	91016	.	+	.	Parent=CGI_10007683;
	scaffold1081	TRF	Tandem_Repeat	90966	91016	50	+	.	.
scaffold1081	subtractBed	intrn	105110	105166	.	+	.	Parent=CGI_10007684;
	scaffold1081	TRF	Tandem_Repeat	105110	105166	80	+	.	.
scaffold1081	subtractBed	intrn	164298	164504	.	+	.	Parent=CGI_10007686;
	scaffold1081	WUBlastX	LTR_Gypsy	164298	164504	44	+	.	.
scaffold1081	subtractBed	intrn	164358	164564	.	+	.	Parent=CGI_10007686;
	scaffold1081	WUBlastX	LTR_Gypsy	164358	164564	50	+	.	.
scaffold1081	subtractBed	intrn	164346	164606	.	+	.	Parent=CGI_10007686;
	scaffold1081	WUBlastX	LTR_Gypsy	164346	164606	33	+	.	.
scaffold1081	subtractBed	intrn	165703	166212	.	+	.	Parent=CGI_10007686;
	scaffold1081	WUBlastX	LINE_Penelope	165703	166212	44	+	.	.
scaffold1083	subtractBed	intrn	106722	107800	.	+	.	Parent=CGI_10016525;
	scaffold1083	TRF	Tandem_Repeat	106722	107800	1509	+	.	.
scaffold1083	subtractBed	intrn	115907	115937	.	-	.	Parent=CGI_10016526;
	scaffold1083	TRF	Tandem_Repeat	115907	115937	55	+	.	.
scaffold1083	subtractBed	intrn	130895	130957	.	-	.	Parent=CGI_10016527;
	scaffold1083	TRF	Tandem_Repeat	130895	130957	103	+	.	.
scaffold1083	subtractBed	intrn	131175	131228	.	-	.	Parent=CGI_10016527;
	scaffold1083	TRF	Tandem_Repeat	131175	131228	108	+	.	.
scaffold1083	subtractBed	intrn	259663	259762	.	+	.	Parent=CGI_10016535;
	scaffold1083	TRF	Tandem_Repeat	259663	259762	107	+	.	.
scaffold1083	subtractBed	intrn	259572	259760	.	+	.	Parent=CGI_10016535;
	scaffold1083	TRF	Tandem_Repeat	259572	259760	99	+	.	.
scaffold1083	subtractBed	intrn	282634	282696	.	+	.	Parent=CGI_10016537;
	scaffold1083	TRF	Tandem_Repeat	282634	282696	108	+	.	.
scaffold1083	subtractBed	intrn	348642	348678	.	-	.	Parent=CGI_10016541;
	scaffold1083	TRF	Tandem_Repeat	348642	348678	74	+	.	.
scaffold1083	subtractBed	intrn	363820	364149	.	-	.	Parent=CGI_10016542;
	scaffold1083	TRF	Tandem_Repeat	363820	364168	583	+	.	.
scaffold1083	subtractBed	intrn	417180	417209	.	-	.	Parent=CGI_10016547;
	scaffold1083	TRF	Tandem_Repeat	417180	417209	60	+	.	.
scaffold1083	subtractBed	intrn	445697	445812	.	+	.	Parent=CGI_10016548;
	scaffold1083	TRF	Tandem_Repeat	445697	445812	81	+	.	.
scaffold1083	subtractBed	intrn	456202	456228	.	+	.	Parent=CGI_10016548;
	scaffold1083	TRF	Tandem_Repeat	456202	456228	54	+	.	.
scaffold1083	subtractBed	intrn	456226	456275	.	+	.	Parent=CGI_10016548;
	scaffold1083	TRF	Tandem_Repeat	456226	456275	91	+	.	.
scaffold1084	subtractBed	intrn	1368	1492	.	+	.	Parent=CGI_10010073;
	scaffold1084	TRF	Tandem_Repeat	1368	1492	241	+	.	.
scaffold1084	subtractBed	intrn	15004	15433	.	+	.	Parent=CGI_10010073;
	scaffold1084	TRF	Tandem_Repeat	15004	15433	746	+	.	.
scaffold1084	subtractBed	intrn	37262	37262	.	+	.	Parent=CGI_10010075;
	scaffold1084	WUBlastX	LTR_ERV1	37262	37336	38	+	.	.
scaffold1084	subtractBed	intrn	37494	37507	.	+	.	Parent=CGI_10010075;
	scaffold1084	WUBlastX	LTR_ERV1	37418	37507	31	+	.	.
scaffold1084	subtractBed	intrn	37738	37772	.	+	.	Parent=CGI_10010075;
	scaffold1084	WUBlastX	LTR_Copia	37677	37772	25	+	.	.
scaffold1084	subtractBed	intrn	109386	109416	.	+	.	Parent=CGI_10010077;
	scaffold1084	TRF	Tandem_Repeat	109386	109416	62	+	.	.
scaffold1084	subtractBed	intrn	148846	148905	.	+	.	Parent=CGI_10010078;
	scaffold1084	TRF	Tandem_Repeat	148846	148905	75	+	.	.
scaffold1084	subtractBed	intrn	151298	151348	.	+	.	Parent=CGI_10010078;
	scaffold1084	TRF	Tandem_Repeat	151298	151348	102	+	.	.
scaffold1084	subtractBed	intrn	152000	152066	.	+	.	Parent=CGI_10010078;
	scaffold1084	TRF	Tandem_Repeat	152000	152066	89	+	.	.
scaffold1084	subtractBed	intrn	148507	148818	.	+	.	Parent=CGI_10010078;
	scaffold1084	WUBlastX	LTR_DIRS	148507	148818	186	+	.	.
scaffold1084	subtractBed	intrn	147728	148471	.	+	.	Parent=CGI_10010078;
	scaffold1084	WUBlastX	LTR_DIRS	147728	148471	174	+	.	.
scaffold1084	subtractBed	intrn	153618	154571	.	+	.	Parent=CGI_10010078;
	scaffold1084	WUBlastX	LTR_DIRS	153618	154571	538	+	.	.
scaffold1084	subtractBed	intrn	152095	153762	.	+	.	Parent=CGI_10010078;
	scaffold1084	WUBlastX	LTR_DIRS	152095	153762	1009	+	.	.
scaffold1084	subtractBed	intrn	147404	148465	.	+	.	Parent=CGI_10010078;
	scaffold1084	WUBlastX	LTR_DIRS	147404	148465	67	+	.	.
scaffold1084	subtractBed	intrn	155372	155470	.	+	.	Parent=CGI_10010078;
	scaffold1084	TRF	Tandem_Repeat	155372	155470	60	+	.	.
scaffold1084	subtractBed	intrn	158312	158338	.	+	.	Parent=CGI_10010078;
	scaffold1084	TRF	Tandem_Repeat	158312	158338	54	+	.	.
scaffold1084	subtractBed	intrn	169612	169669	.	+	.	Parent=CGI_10010079;
	scaffold1084	TRF	Tandem_Repeat	169612	169669	116	+	.	.
scaffold1084	subtractBed	intrn	173927	174190	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	173927	174190	73	+	.	.
scaffold1084	subtractBed	intrn	174759	174977	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	174759	174977	60	+	.	.
scaffold1084	subtractBed	intrn	174829	176247	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	174829	176247	325	+	.	.
scaffold1084	subtractBed	intrn	176231	176422	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	176231	176422	47	+	.	.
scaffold1084	subtractBed	intrn	176613	176870	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	176613	176870	169	+	.	.
scaffold1084	subtractBed	intrn	177403	177519	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	177403	177519	30	+	.	.
scaffold1084	subtractBed	intrn	177528	177719	.	+	.	Parent=CGI_10010079;
	scaffold1084	WUBlastX	LTR_DIRS	177528	177719	100	+	.	.
scaffold1084	subtractBed	intrn	185143	185167	.	+	.	Parent=CGI_10010079;
	scaffold1084	TRF	Tandem_Repeat	185143	185167	50	+	.	.
scaffold1084	subtractBed	intrn	201069	201179	.	+	.	Parent=CGI_10010080;
	scaffold1084	TRF	Tandem_Repeat	201069	201179	75	+	.	.
scaffold1084	subtractBed	intrn	199935	200384	.	+	.	Parent=CGI_10010080;
	scaffold1084	WUBlastX	LINE_RTE-X	199935	200384	47	+	.	.
scaffold1086	subtractBed	intrn	78726	78781	.	+	.	Parent=CGI_10021931;
	scaffold1086	TRF	Tandem_Repeat	78726	78781	112	+	.	.
scaffold1086	subtractBed	intrn	81099	81142	.	+	.	Parent=CGI_10021931;
	scaffold1086	TRF	Tandem_Repeat	81099	81142	88	+	.	.
scaffold1086	subtractBed	intrn	91548	91590	.	+	.	Parent=CGI_10021931;
	scaffold1086	TRF	Tandem_Repeat	91548	91590	77	+	.	.
scaffold1086	subtractBed	intrn	103665	103714	.	+	.	Parent=CGI_10021931;
	scaffold1086	TRF	Tandem_Repeat	103665	103714	91	+	.	.
scaffold1086	subtractBed	intrn	103923	103978	.	+	.	Parent=CGI_10021931;
	scaffold1086	TRF	Tandem_Repeat	103923	103978	112	+	.	.
scaffold1086	subtractBed	intrn	101911	102408	.	+	.	Parent=CGI_10021931;
	scaffold1086	WUBlastX	LINE_CR1	101911	102408	107	-	.	.
scaffold1086	subtractBed	intrn	102133	102612	.	+	.	Parent=CGI_10021931;
	scaffold1086	WUBlastX	LINE_Jockey	102133	102612	104	-	.	.
scaffold1086	subtractBed	intrn	102103	102522	.	+	.	Parent=CGI_10021931;
	scaffold1086	WUBlastX	LINE_RTE-X	102103	102522	206	-	.	.
scaffold1086	subtractBed	intrn	170001	170070	.	-	.	Parent=CGI_10021934;
	scaffold1086	TRF	Tandem_Repeat	170001	170070	113	+	.	.
scaffold1086	subtractBed	intrn	173942	174006	.	+	.	Parent=CGI_10021936;
	scaffold1086	TRF	Tandem_Repeat	173942	174006	109	+	.	.
scaffold1086	subtractBed	intrn	274786	275076	.	+	.	Parent=CGI_10021939;
	scaffold1086	TRF	Tandem_Repeat	274786	275076	401	+	.	.
scaffold1086	subtractBed	intrn	279268	279312	.	+	.	Parent=CGI_10021939;
	scaffold1086	TRF	Tandem_Repeat	279268	279312	90	+	.	.
scaffold1086	subtractBed	intrn	284593	284659	.	+	.	Parent=CGI_10021939;
	scaffold1086	TRF	Tandem_Repeat	284593	284659	134	+	.	.
scaffold1086	subtractBed	intrn	310484	310536	.	-	.	Parent=CGI_10021942;
	scaffold1086	TRF	Tandem_Repeat	310484	310536	106	+	.	.
scaffold1086	subtractBed	intrn	321339	321404	.	-	.	Parent=CGI_10021942;
	scaffold1086	TRF	Tandem_Repeat	321339	321404	125	+	.	.
scaffold1086	subtractBed	intrn	339141	339189	.	-	.	Parent=CGI_10021943;
	scaffold1086	TRF	Tandem_Repeat	339141	339189	98	+	.	.
scaffold1086	subtractBed	intrn	342140	342170	.	-	.	Parent=CGI_10021943;
	scaffold1086	TRF	Tandem_Repeat	342140	342170	53	+	.	.
scaffold1086	subtractBed	intrn	370157	370330	.	-	.	Parent=CGI_10021944;
	scaffold1086	TRF	Tandem_Repeat	370157	370330	144	+	.	.
scaffold1086	subtractBed	intrn	404401	405196	.	-	.	Parent=CGI_10021945;
	scaffold1086	TRF	Tandem_Repeat	404401	405210	1210	+	.	.
scaffold1086	subtractBed	intrn	404401	405196	.	-	.	Parent=CGI_10021945;
	scaffold1086	TRF	Tandem_Repeat	404401	405210	1270	+	.	.
scaffold1086	subtractBed	intrn	432353	432416	.	+	.	Parent=CGI_10021946;
	scaffold1086	TRF	Tandem_Repeat	432353	432416	128	+	.	.
scaffold1086	subtractBed	intrn	434097	434887	.	+	.	Parent=CGI_10021946;
	scaffold1086	TRF	Tandem_Repeat	434097	434887	956	+	.	.
scaffold1086	subtractBed	intrn	434097	434887	.	+	.	Parent=CGI_10021946;
	scaffold1086	TRF	Tandem_Repeat	434097	434887	980	+	.	.
scaffold1086	subtractBed	intrn	435541	435714	.	+	.	Parent=CGI_10021946;
	scaffold1086	TRF	Tandem_Repeat	435541	435714	294	+	.	.
scaffold1086	subtractBed	intrn	459170	459199	.	-	.	Parent=CGI_10021947;
	scaffold1086	TRF	Tandem_Repeat	459170	459199	60	+	.	.
scaffold1086	subtractBed	intrn	519522	519568	.	+	.	Parent=CGI_10021950;
	scaffold1086	TRF	Tandem_Repeat	519522	519568	62	+	.	.
scaffold1086	subtractBed	intrn	519520	519570	.	+	.	Parent=CGI_10021950;
	scaffold1086	TRF	Tandem_Repeat	519520	519570	75	+	.	.
scaffold1086	subtractBed	intrn	520249	520317	.	+	.	Parent=CGI_10021950;
	scaffold1086	TRF	Tandem_Repeat	520249	520317	72	+	.	.
scaffold1086	subtractBed	intrn	521616	521652	.	+	.	Parent=CGI_10021950;
	scaffold1086	TRF	Tandem_Repeat	521616	521652	65	+	.	.
scaffold1086	subtractBed	intrn	521652	521688	.	+	.	Parent=CGI_10021950;
	scaffold1086	TRF	Tandem_Repeat	521652	521688	74	+	.	.
scaffold1087	subtractBed	intrn	11230	11994	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	11230	11994	265	+	.	.
scaffold1087	subtractBed	intrn	12928	14586	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	12928	14586	679	+	.	.
scaffold1087	subtractBed	intrn	14977	15588	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	14977	15588	529	+	.	.
scaffold1087	subtractBed	intrn	13627	14586	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	13627	14586	747	+	.	.
scaffold1087	subtractBed	intrn	13249	14553	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	13249	14553	696	+	.	.
scaffold1087	subtractBed	intrn	8727	9248	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LINE_CR1	8727	9248	43	-	.	.
scaffold1087	subtractBed	intrn	13765	14775	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	13765	14775	352	+	.	.
scaffold1087	subtractBed	intrn	14788	15588	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	14788	15588	415	+	.	.
scaffold1087	subtractBed	intrn	11281	11928	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	11281	11928	267	+	.	.
scaffold1087	subtractBed	intrn	14962	15729	.	+	.	Parent=CGI_10001183;
	scaffold1087	WUBlastX	LTR_Gypsy	14962	15729	376	+	.	.
scaffold1088	subtractBed	intrn	9737	9841	.	-	.	Parent=CGI_10003647;
	scaffold1088	TRF	Tandem_Repeat	9737	9841	99	+	.	.
scaffold1088	subtractBed	intrn	37106	37654	.	-	.	Parent=CGI_10003651;
	scaffold1088	WUBlastX	LINE_R2-Hero	37106	37702	134	+	.	.
scaffold1088	subtractBed	intrn	37533	37654	.	-	.	Parent=CGI_10003651;
	scaffold1088	WUBlastX	LINE_R2-Hero	37533	37742	68	+	.	.
scaffold1088	subtractBed	intrn	63516	63548	.	-	.	Parent=CGI_10003652;
	scaffold1088	TRF	Tandem_Repeat	63516	63548	66	+	.	.
scaffold1089	subtractBed	intrn	46054	46096	.	-	.	Parent=CGI_10005629;
	scaffold1089	TRF	Tandem_Repeat	46054	46096	86	+	.	.
scaffold109	subtractBed	intrn	150092	150145	.	-	.	Parent=CGI_10022109;
	scaffold109	TRF	Tandem_Repeat	150092	150145	99	+	.	.
scaffold109	subtractBed	intrn	150969	151010	.	-	.	Parent=CGI_10022109;
	scaffold109	TRF	Tandem_Repeat	150969	151010	84	+	.	.
scaffold109	subtractBed	intrn	156994	157129	.	-	.	Parent=CGI_10022110;
	scaffold109	TRF	Tandem_Repeat	156994	157129	218	+	.	.
scaffold109	subtractBed	intrn	158507	158536	.	-	.	Parent=CGI_10022110;
	scaffold109	TRF	Tandem_Repeat	158507	158536	60	+	.	.
scaffold109	subtractBed	intrn	169784	169814	.	-	.	Parent=CGI_10022110;
	scaffold109	TRF	Tandem_Repeat	169784	169814	53	+	.	.
scaffold109	subtractBed	intrn	237408	238073	.	-	.	Parent=CGI_10022112;
	scaffold109	TRF	Tandem_Repeat	237408	238073	710	+	.	.
scaffold109	subtractBed	intrn	239996	240154	.	-	.	Parent=CGI_10022112;
	scaffold109	WUBlastX	DNA_hAT-Ac	239996	240154	59	+	.	.
scaffold109	subtractBed	intrn	252772	253380	.	-	.	Parent=CGI_10022112;
	scaffold109	WUBlastX	DNA_TcMar-Tc1	252772	253380	61	-	.	.
scaffold109	subtractBed	intrn	253261	253410	.	-	.	Parent=CGI_10022112;
	scaffold109	WUBlastX	DNA_TcMar-Tc1	253261	253410	29	-	.	.
scaffold109	subtractBed	intrn	252374	253243	.	-	.	Parent=CGI_10022112;
	scaffold109	WUBlastX	DNA_TcMar-Tc1	252374	253243	185	-	.	.
scaffold109	subtractBed	intrn	273700	275049	.	-	.	Parent=CGI_10022112;
	scaffold109	WUBlastX	DNA_TcMar-Tc2	273700	275049	1088	+	.	.
scaffold109	subtractBed	intrn	290570	291094	.	-	.	Parent=CGI_10022112;
	scaffold109	TRF	Tandem_Repeat	290570	291094	624	+	.	.
scaffold109	subtractBed	intrn	290570	291094	.	-	.	Parent=CGI_10022112;
	scaffold109	TRF	Tandem_Repeat	290570	291094	637	+	.	.
scaffold109	subtractBed	intrn	310813	310865	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	310813	310865	56	+	.	.
scaffold109	subtractBed	intrn	314945	315037	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	314945	315037	80	+	.	.
scaffold109	subtractBed	intrn	315444	316343	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	315444	316343	1615	+	.	.
scaffold109	subtractBed	intrn	330266	330589	.	-	.	Parent=CGI_10022113;
	scaffold109	WUBlastX	LINE_RTE-X	330266	330589	74	-	.	.
scaffold109	subtractBed	intrn	330197	330589	.	-	.	Parent=CGI_10022113;
	scaffold109	WUBlastX	LINE_RTE-X	330197	330589	54	-	.	.
scaffold109	subtractBed	intrn	330377	330766	.	-	.	Parent=CGI_10022113;
	scaffold109	WUBlastX	LINE_RTE-X	330377	330766	96	-	.	.
scaffold109	subtractBed	intrn	343213	343260	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	343213	343260	60	+	.	.
scaffold109	subtractBed	intrn	343216	343260	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	343216	343260	81	+	.	.
scaffold109	subtractBed	intrn	355395	356084	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	355395	356084	1109	+	.	.
scaffold109	subtractBed	intrn	360406	361236	.	-	.	Parent=CGI_10022113;
	scaffold109	TRF	Tandem_Repeat	360406	361236	1117	+	.	.
scaffold109	subtractBed	intrn	389303	389499	.	-	.	Parent=CGI_10022115;
	scaffold109	TRF	Tandem_Repeat	389303	389499	292	+	.	.
scaffold109	subtractBed	intrn	392068	392729	.	-	.	Parent=CGI_10022115;
	scaffold109	TRF	Tandem_Repeat	392068	392729	979	+	.	.
scaffold109	subtractBed	intrn	413583	414404	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	413583	414404	929	+	.	.
scaffold109	subtractBed	intrn	415962	416218	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	415962	416218	94	+	.	.
scaffold109	subtractBed	intrn	416113	416228	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	416113	416228	55	+	.	.
scaffold109	subtractBed	intrn	416077	416253	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	416077	416253	116	+	.	.
scaffold109	subtractBed	intrn	419580	419619	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	419580	419619	80	+	.	.
scaffold109	subtractBed	intrn	422094	422185	.	+	.	Parent=CGI_10022116;
	scaffold109	TRF	Tandem_Repeat	422094	422185	163	+	.	.
scaffold109	subtractBed	intrn	445957	446002	.	+	.	Parent=CGI_10022118;
	scaffold109	TRF	Tandem_Repeat	445957	446002	92	+	.	.
scaffold109	subtractBed	intrn	446655	446939	.	+	.	Parent=CGI_10022118;
	scaffold109	TRF	Tandem_Repeat	446655	446939	153	+	.	.
scaffold109	subtractBed	intrn	446655	446935	.	+	.	Parent=CGI_10022118;
	scaffold109	TRF	Tandem_Repeat	446655	446935	175	+	.	.
scaffold109	subtractBed	intrn	448512	449295	.	+	.	Parent=CGI_10022118;
	scaffold109	TRF	Tandem_Repeat	448512	449295	383	+	.	.
scaffold109	subtractBed	intrn	486991	487030	.	+	.	Parent=CGI_10022120;
	scaffold109	TRF	Tandem_Repeat	486991	487030	80	+	.	.
scaffold109	subtractBed	intrn	502943	502972	.	+	.	Parent=CGI_10022120;
	scaffold109	TRF	Tandem_Repeat	502943	502972	60	+	.	.
scaffold109	subtractBed	intrn	520103	520149	.	+	.	Parent=CGI_10022121;
	scaffold109	TRF	Tandem_Repeat	520103	520149	85	+	.	.
scaffold109	subtractBed	intrn	523693	523720	.	+	.	Parent=CGI_10022121;
	scaffold109	TRF	Tandem_Repeat	523693	523720	56	+	.	.
scaffold109	subtractBed	intrn	526773	526817	.	+	.	Parent=CGI_10022121;
	scaffold109	TRF	Tandem_Repeat	526773	526817	63	+	.	.
scaffold109	subtractBed	intrn	534284	534325	.	+	.	Parent=CGI_10022121;
	scaffold109	TRF	Tandem_Repeat	534284	534325	84	+	.	.
scaffold109	subtractBed	intrn	544996	545638	.	-	.	Parent=CGI_10022122;
	scaffold109	TRF	Tandem_Repeat	544996	545638	617	+	.	.
scaffold109	subtractBed	intrn	544995	545537	.	-	.	Parent=CGI_10022122;
	scaffold109	TRF	Tandem_Repeat	544995	545537	761	+	.	.
scaffold109	subtractBed	intrn	544995	545638	.	-	.	Parent=CGI_10022122;
	scaffold109	TRF	Tandem_Repeat	544995	545638	750	+	.	.
scaffold109	subtractBed	intrn	569823	569857	.	-	.	Parent=CGI_10022123;
	scaffold109	TRF	Tandem_Repeat	569823	569857	70	+	.	.
scaffold109	subtractBed	intrn	587130	587175	.	-	.	Parent=CGI_10022123;
	scaffold109	TRF	Tandem_Repeat	587130	587175	92	+	.	.
scaffold109	subtractBed	intrn	588123	588157	.	-	.	Parent=CGI_10022123;
	scaffold109	TRF	Tandem_Repeat	588123	588157	52	+	.	.
scaffold109	subtractBed	intrn	599337	599392	.	-	.	Parent=CGI_10022123;
	scaffold109	TRF	Tandem_Repeat	599337	599392	112	+	.	.
scaffold109	subtractBed	intrn	615727	616605	.	+	.	Parent=CGI_10022124;
	scaffold109	TRF	Tandem_Repeat	615727	616605	1286	+	.	.
scaffold109	subtractBed	intrn	617549	617695	.	+	.	Parent=CGI_10022124;
	scaffold109	TRF	Tandem_Repeat	617549	617695	73	+	.	.
scaffold109	subtractBed	intrn	617611	617740	.	+	.	Parent=CGI_10022124;
	scaffold109	TRF	Tandem_Repeat	617611	617740	93	+	.	.
scaffold109	subtractBed	intrn	621474	621523	.	+	.	Parent=CGI_10022124;
	scaffold109	TRF	Tandem_Repeat	621474	621523	100	+	.	.
scaffold109	subtractBed	intrn	627734	627922	.	+	.	Parent=CGI_10022124;
	scaffold109	TRF	Tandem_Repeat	627721	627922	235	+	.	.
scaffold109	subtractBed	intrn	644830	644863	.	+	.	Parent=CGI_10022126;
	scaffold109	TRF	Tandem_Repeat	644830	644863	68	+	.	.
scaffold109	subtractBed	intrn	680600	680625	.	+	.	Parent=CGI_10022132;
	scaffold109	TRF	Tandem_Repeat	680600	680625	52	+	.	.
scaffold109	subtractBed	intrn	684536	684577	.	+	.	Parent=CGI_10022132;
	scaffold109	TRF	Tandem_Repeat	684536	684577	84	+	.	.
scaffold1091	subtractBed	intrn	21942	22091	.	+	.	Parent=CGI_10002834;
	scaffold1091	TRF	Tandem_Repeat	21942	22091	140	+	.	.
scaffold1093	subtractBed	intrn	6597	6760	.	-	.	Parent=CGI_10019783;
	scaffold1093	TRF	Tandem_Repeat	6597	6762	120	+	.	.
scaffold1093	subtractBed	intrn	37843	37889	.	-	.	Parent=CGI_10019785;
	scaffold1093	TRF	Tandem_Repeat	37843	37889	85	+	.	.
scaffold1093	subtractBed	intrn	83563	83610	.	+	.	Parent=CGI_10019787;
	scaffold1093	TRF	Tandem_Repeat	83563	83610	96	+	.	.
scaffold1093	subtractBed	intrn	82761	82955	.	+	.	Parent=CGI_10019787;
	scaffold1093	WUBlastX	LINE_L2	82761	82955	39	+	.	.
scaffold1093	subtractBed	intrn	82044	82265	.	+	.	Parent=CGI_10019787;
	scaffold1093	WUBlastX	LINE_CR1-L2	82044	82265	83	+	.	.
scaffold1093	subtractBed	intrn	81963	82223	.	+	.	Parent=CGI_10019787;
	scaffold1093	WUBlastX	LINE_L2	81963	82223	67	+	.	.
scaffold1093	subtractBed	intrn	117653	117851	.	-	.	Parent=CGI_10019791;
	scaffold1093	TRF	Tandem_Repeat	117653	117851	310	+	.	.
scaffold1093	subtractBed	intrn	127776	127870	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	127776	127870	74	+	.	.
scaffold1093	subtractBed	intrn	127740	127869	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	127740	127869	131	+	.	.
scaffold1093	subtractBed	intrn	134392	134436	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	134392	134436	90	+	.	.
scaffold1093	subtractBed	intrn	142580	143739	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	142580	143739	1359	+	.	.
scaffold1093	subtractBed	intrn	143332	143738	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	143332	143738	229	+	.	.
scaffold1093	subtractBed	intrn	144801	144844	.	-	.	Parent=CGI_10019792;
	scaffold1093	TRF	Tandem_Repeat	144801	144844	79	+	.	.
scaffold1093	subtractBed	intrn	147372	147427	.	-	.	Parent=CGI_10019793;
	scaffold1093	TRF	Tandem_Repeat	147372	147427	112	+	.	.
scaffold1093	subtractBed	intrn	149356	149414	.	-	.	Parent=CGI_10019793;
	scaffold1093	TRF	Tandem_Repeat	149356	149414	118	+	.	.
scaffold1093	subtractBed	intrn	199450	199496	.	-	.	Parent=CGI_10019796;
	scaffold1093	TRF	Tandem_Repeat	199450	199496	94	+	.	.
scaffold1093	subtractBed	intrn	364492	364543	.	-	.	Parent=CGI_10019803;
	scaffold1093	TRF	Tandem_Repeat	364492	364543	104	+	.	.
scaffold1093	subtractBed	intrn	404881	405039	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404881	405039	55	-	.	.
scaffold1093	subtractBed	intrn	404881	405096	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404881	405096	28	-	.	.
scaffold1093	subtractBed	intrn	405098	405415	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	405098	405415	65	-	.	.
scaffold1093	subtractBed	intrn	405408	405791	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	405408	405791	37	-	.	.
scaffold1093	subtractBed	intrn	404667	404882	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404667	404882	58	-	.	.
scaffold1093	subtractBed	intrn	405408	405659	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	405408	405659	61	-	.	.
scaffold1093	subtractBed	intrn	404434	404619	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404434	404619	33	-	.	.
scaffold1093	subtractBed	intrn	404598	404882	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404598	404882	42	-	.	.
scaffold1093	subtractBed	intrn	404482	404580	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	404482	404580	41	-	.	.
scaffold1093	subtractBed	intrn	405408	405581	.	+	.	Parent=CGI_10019807;
	scaffold1093	WUBlastX	LINE_Penelope	405408	405581	106	-	.	.
scaffold1093	subtractBed	intrn	424716	425009	.	+	.	Parent=CGI_10019808;
	scaffold1093	WUBlastX	DNA_Sola	424716	425009	65	+	.	.
scaffold1093	subtractBed	intrn	424635	425015	.	+	.	Parent=CGI_10019808;
	scaffold1093	WUBlastX	DNA_Sola	424635	425015	58	+	.	.
scaffold1093	subtractBed	intrn	424848	425048	.	+	.	Parent=CGI_10019808;
	scaffold1093	WUBlastX	DNA_Sola	424848	425048	59	+	.	.
scaffold1093	subtractBed	intrn	437370	437416	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	437370	437416	94	+	.	.
scaffold1093	subtractBed	intrn	438703	438756	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	438703	438756	76	+	.	.
scaffold1093	subtractBed	intrn	440022	440058	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	440022	440058	51	+	.	.
scaffold1093	subtractBed	intrn	442370	442518	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	442370	442518	199	+	.	.
scaffold1093	subtractBed	intrn	443396	443553	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	443396	443553	158	+	.	.
scaffold1093	subtractBed	intrn	443535	444091	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	443535	444091	817	+	.	.
scaffold1093	subtractBed	intrn	444678	444777	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	444678	444777	107	+	.	.
scaffold1093	subtractBed	intrn	450039	450418	.	+	.	Parent=CGI_10019808;
	scaffold1093	TRF	Tandem_Repeat	450039	450418	391	+	.	.
scaffold1093	subtractBed	intrn	590231	590258	.	+	.	Parent=CGI_10019815;
	scaffold1093	TRF	Tandem_Repeat	590231	590258	56	+	.	.
scaffold1093	subtractBed	intrn	601715	601763	.	+	.	Parent=CGI_10019815;
	scaffold1093	TRF	Tandem_Repeat	601715	601763	89	+	.	.
scaffold1094	subtractBed	intrn	46058	46114	.	+	.	Parent=CGI_10021808;
	scaffold1094	TRF	Tandem_Repeat	46058	46114	114	+	.	.
scaffold1094	subtractBed	intrn	49071	49259	.	+	.	Parent=CGI_10021808;
	scaffold1094	WUBlastX	LTR_Ngaro	49071	49259	118	-	.	.
scaffold1094	subtractBed	intrn	62614	62735	.	+	.	Parent=CGI_10021809;
	scaffold1094	TRF	Tandem_Repeat	62614	62735	74	+	.	.
scaffold1094	subtractBed	intrn	62636	62734	.	+	.	Parent=CGI_10021809;
	scaffold1094	TRF	Tandem_Repeat	62636	62734	61	+	.	.
scaffold1094	subtractBed	intrn	155244	155280	.	+	.	Parent=CGI_10021813;
	scaffold1094	TRF	Tandem_Repeat	155244	155280	58	+	.	.
scaffold1094	subtractBed	intrn	164949	164992	.	-	.	Parent=CGI_10021814;
	scaffold1094	TRF	Tandem_Repeat	164949	164992	88	+	.	.
scaffold1094	subtractBed	intrn	166299	166325	.	-	.	Parent=CGI_10021814;
	scaffold1094	TRF	Tandem_Repeat	166299	166325	54	+	.	.
scaffold1094	subtractBed	intrn	219302	219377	.	+	.	Parent=CGI_10021816;
	scaffold1094	TRF	Tandem_Repeat	219302	219377	79	+	.	.
scaffold1094	subtractBed	intrn	221314	221664	.	+	.	Parent=CGI_10021816;
	scaffold1094	TRF	Tandem_Repeat	221314	221664	639	+	.	.
scaffold1094	subtractBed	intrn	234091	234121	.	+	.	Parent=CGI_10021816;
	scaffold1094	TRF	Tandem_Repeat	234091	234121	53	+	.	.
scaffold1094	subtractBed	intrn	230900	231433	.	+	.	Parent=CGI_10021816;
	scaffold1094	WUBlastX	LINE_RTE-X	230900	231433	138	+	.	.
scaffold1094	subtractBed	intrn	230810	231313	.	+	.	Parent=CGI_10021816;
	scaffold1094	WUBlastX	LINE_RTE-X	230810	231313	83	+	.	.
scaffold1094	subtractBed	intrn	276431	276566	.	-	.	Parent=CGI_10021820;
	scaffold1094	TRF	Tandem_Repeat	276431	276566	112	+	.	.
scaffold1094	subtractBed	intrn	436859	436886	.	-	.	Parent=CGI_10021828;
	scaffold1094	TRF	Tandem_Repeat	436859	436886	56	+	.	.
scaffold1094	subtractBed	intrn	446918	447032	.	+	.	Parent=CGI_10021829;
	scaffold1094	TRF	Tandem_Repeat	446918	447032	74	+	.	.
scaffold1094	subtractBed	intrn	509683	509742	.	-	.	Parent=CGI_10021833;
	scaffold1094	TRF	Tandem_Repeat	509683	509742	57	+	.	.
scaffold1094	subtractBed	intrn	509683	509742	.	+	.	Parent=CGI_10021834;
	scaffold1094	TRF	Tandem_Repeat	509683	509742	57	+	.	.
scaffold1094	subtractBed	intrn	522955	524539	.	-	.	Parent=CGI_10021835;
	scaffold1094	TRF	Tandem_Repeat	522955	524539	1749	+	.	.
scaffold1094	subtractBed	intrn	522919	524539	.	-	.	Parent=CGI_10021835;
	scaffold1094	TRF	Tandem_Repeat	522919	524539	1690	+	.	.
scaffold1094	subtractBed	intrn	609707	609757	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	609707	609757	68	+	.	.
scaffold1094	subtractBed	intrn	614488	615276	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	614488	615276	976	+	.	.
scaffold1094	subtractBed	intrn	616875	617555	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	616875	617555	887	+	.	.
scaffold1094	subtractBed	intrn	619884	620004	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	619884	620004	64	+	.	.
scaffold1094	subtractBed	intrn	619913	619989	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	619913	619989	52	+	.	.
scaffold1094	subtractBed	intrn	627319	627368	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	627319	627368	100	+	.	.
scaffold1094	subtractBed	intrn	627874	627917	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	627874	627917	63	+	.	.
scaffold1094	subtractBed	intrn	627948	628747	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	627948	628747	1013	+	.	.
scaffold1094	subtractBed	intrn	627948	628744	.	-	.	Parent=CGI_10021838;
	scaffold1094	TRF	Tandem_Repeat	627948	628744	998	+	.	.
scaffold1094	subtractBed	intrn	630562	631674	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1-Tx1	630562	631674	87	+	.	.
scaffold1094	subtractBed	intrn	624720	625223	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1-Tx1	624720	625223	140	+	.	.
scaffold1094	subtractBed	intrn	625243	625359	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1-Tx1	625243	625359	64	+	.	.
scaffold1094	subtractBed	intrn	631673	631807	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1	631673	631807	39	+	.	.
scaffold1094	subtractBed	intrn	629640	629921	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1	629640	629921	40	+	.	.
scaffold1094	subtractBed	intrn	631673	631864	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1-Tx1	631673	631864	34	+	.	.
scaffold1094	subtractBed	intrn	629778	631334	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	LINE_L1-Tx1	629778	631334	444	+	.	.
scaffold1094	subtractBed	intrn	638093	638497	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	DNA_Kolobok-IS4	638093	638497	72	-	.	.
scaffold1094	subtractBed	intrn	639356	639799	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	DNA_IS4EU	639356	639799	103	-	.	.
scaffold1094	subtractBed	intrn	639356	639910	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	DNA_IS4EU	639356	639910	65	-	.	.
scaffold1094	subtractBed	intrn	638968	639718	.	-	.	Parent=CGI_10021838;
	scaffold1094	WUBlastX	DNA_Kolobok-IS4	638954	639718	68	-	.	.
scaffold1094	subtractBed	intrn	660407	660418	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	660407	660637	257	-	.	.
scaffold1094	subtractBed	intrn	660628	660637	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	660407	660637	257	-	.	.
scaffold1094	subtractBed	intrn	661416	661416	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661416	661610	171	-	.	.
scaffold1094	subtractBed	intrn	661160	661164	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661027	661164	151	-	.	.
scaffold1094	subtractBed	intrn	661839	661911	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661839	662120	124	-	.	.
scaffold1094	subtractBed	intrn	661561	661610	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661416	661610	171	-	.	.
scaffold1094	subtractBed	intrn	661878	661911	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661878	662102	273	-	.	.
scaffold1094	subtractBed	intrn	662096	662120	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661839	662120	124	-	.	.
scaffold1094	subtractBed	intrn	662096	662102	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	661878	662102	273	-	.	.
scaffold1094	subtractBed	intrn	662615	662617	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	662405	662617	299	-	.	.
scaffold1094	subtractBed	intrn	662848	662850	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	662848	663012	170	-	.	.
scaffold1094	subtractBed	intrn	663010	663012	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	662848	663012	170	-	.	.
scaffold1094	subtractBed	intrn	663211	663231	.	+	.	Parent=CGI_10021839;
	scaffold1094	WUBlastX	DNA_hAT	663211	663729	703	-	.	.
scaffold1094	subtractBed	intrn	660407	660418	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	660407	660637	257	-	.	.
scaffold1094	subtractBed	intrn	660628	660637	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	660407	660637	257	-	.	.
scaffold1094	subtractBed	intrn	661416	661416	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661416	661610	171	-	.	.
scaffold1094	subtractBed	intrn	661160	661164	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661027	661164	151	-	.	.
scaffold1094	subtractBed	intrn	661839	661911	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661839	662120	124	-	.	.
scaffold1094	subtractBed	intrn	661561	661610	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661416	661610	171	-	.	.
scaffold1094	subtractBed	intrn	661878	661911	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661878	662102	273	-	.	.
scaffold1094	subtractBed	intrn	662096	662120	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661839	662120	124	-	.	.
scaffold1094	subtractBed	intrn	662096	662102	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	661878	662102	273	-	.	.
scaffold1094	subtractBed	intrn	662615	662617	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	662405	662617	299	-	.	.
scaffold1094	subtractBed	intrn	662848	662850	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	662848	663012	170	-	.	.
scaffold1094	subtractBed	intrn	663010	663012	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	662848	663012	170	-	.	.
scaffold1094	subtractBed	intrn	663211	663231	.	-	.	Parent=CGI_10021840;
	scaffold1094	WUBlastX	DNA_hAT	663211	663729	703	-	.	.
scaffold1094	subtractBed	intrn	676418	676939	.	-	.	Parent=CGI_10021842;
	scaffold1094	TRF	Tandem_Repeat	676418	676939	857	+	.	.
scaffold1094	subtractBed	intrn	691404	691439	.	+	.	Parent=CGI_10021843;
	scaffold1094	TRF	Tandem_Repeat	691404	691439	72	+	.	.
scaffold1094	subtractBed	intrn	692251	692295	.	+	.	Parent=CGI_10021843;
	scaffold1094	TRF	Tandem_Repeat	692251	692295	90	+	.	.
scaffold1096	subtractBed	intrn	8966	8997	.	+	.	Parent=CGI_10006447;
	scaffold1096	TRF	Tandem_Repeat	8966	8997	64	+	.	.
scaffold1096	subtractBed	intrn	66561	67166	.	+	.	Parent=CGI_10006453;
	scaffold1096	WUBlastX	LTR_Gypsy	66561	67166	525	-	.	.
scaffold1096	subtractBed	intrn	67166	67405	.	+	.	Parent=CGI_10006453;
	scaffold1096	WUBlastX	LTR_Gypsy	67166	67405	102	-	.	.
scaffold1096	subtractBed	intrn	68116	68997	.	+	.	Parent=CGI_10006453;
	scaffold1096	WUBlastX	LTR_Gypsy	68116	68997	157	-	.	.
scaffold1096	subtractBed	intrn	67330	67506	.	+	.	Parent=CGI_10006453;
	scaffold1096	WUBlastX	LTR_Gypsy	67330	67506	61	-	.	.
scaffold1096	subtractBed	intrn	66076	66705	.	+	.	Parent=CGI_10006453;
	scaffold1096	WUBlastX	LTR_Gypsy	66076	66705	128	-	.	.
scaffold1096	subtractBed	intrn	76822	76853	.	+	.	Parent=CGI_10006453;
	scaffold1096	TRF	Tandem_Repeat	76822	76853	55	+	.	.
scaffold1096	subtractBed	intrn	77477	77516	.	+	.	Parent=CGI_10006453;
	scaffold1096	TRF	Tandem_Repeat	77477	77516	80	+	.	.
scaffold1096	subtractBed	intrn	100112	100173	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	100112	100173	73	+	.	.
scaffold1096	subtractBed	intrn	100104	100173	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	100104	100173	122	+	.	.
scaffold1096	subtractBed	intrn	100110	100173	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	100110	100173	63	+	.	.
scaffold1096	subtractBed	intrn	101788	101847	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	101788	101847	120	+	.	.
scaffold1096	subtractBed	intrn	108489	108543	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	108489	108543	83	+	.	.
scaffold1096	subtractBed	intrn	110637	110678	.	-	.	Parent=CGI_10006455;
	scaffold1096	TRF	Tandem_Repeat	110637	110678	84	+	.	.
scaffold1096	subtractBed	intrn	147183	147232	.	+	.	Parent=CGI_10006457;
	scaffold1096	TRF	Tandem_Repeat	147183	147232	100	+	.	.
scaffold1096	subtractBed	intrn	151253	151327	.	+	.	Parent=CGI_10006457;
	scaffold1096	TRF	Tandem_Repeat	151253	151327	107	+	.	.
scaffold1097	subtractBed	intrn	231823	231858	.	-	.	Parent=CGI_10024512;
	scaffold1097	TRF	Tandem_Repeat	231823	231858	72	+	.	.
scaffold1097	subtractBed	intrn	232049	232303	.	-	.	Parent=CGI_10024512;
	scaffold1097	WUBlastX	LINE_L1-Tx1	232049	232303	30	-	.	.
scaffold1097	subtractBed	intrn	232022	232330	.	-	.	Parent=CGI_10024512;
	scaffold1097	WUBlastX	LINE_L1-Tx1	232022	232330	24	-	.	.
scaffold1097	subtractBed	intrn	271323	271366	.	+	.	Parent=CGI_10024516;
	scaffold1097	TRF	Tandem_Repeat	271323	271366	88	+	.	.
scaffold1097	subtractBed	intrn	280676	280726	.	+	.	Parent=CGI_10024518;
	scaffold1097	TRF	Tandem_Repeat	280676	280726	63	+	.	.
scaffold1097	subtractBed	intrn	343727	343759	.	+	.	Parent=CGI_10024523;
	scaffold1097	TRF	Tandem_Repeat	343727	343759	57	+	.	.
scaffold1097	subtractBed	intrn	351463	351510	.	-	.	Parent=CGI_10024524;
	scaffold1097	TRF	Tandem_Repeat	351463	351510	96	+	.	.
scaffold1097	subtractBed	intrn	352414	352449	.	-	.	Parent=CGI_10024524;
	scaffold1097	TRF	Tandem_Repeat	352414	352449	72	+	.	.
scaffold1097	subtractBed	intrn	378626	378669	.	+	.	Parent=CGI_10024526;
	scaffold1097	TRF	Tandem_Repeat	378626	378669	52	+	.	.
scaffold1097	subtractBed	intrn	391045	391517	.	+	.	Parent=CGI_10024528;
	scaffold1097	TRF	Tandem_Repeat	390999	391517	921	+	.	.
scaffold1097	subtractBed	intrn	403297	403338	.	-	.	Parent=CGI_10024529;
	scaffold1097	TRF	Tandem_Repeat	403297	403338	50	+	.	.
scaffold1097	subtractBed	intrn	404535	405361	.	-	.	Parent=CGI_10024529;
	scaffold1097	TRF	Tandem_Repeat	404535	405361	1219	+	.	.
scaffold1097	subtractBed	intrn	417061	417765	.	-	.	Parent=CGI_10024529;
	scaffold1097	WUBlastX	LINE_L1	417061	417765	139	-	.	.
scaffold1097	subtractBed	intrn	417022	417900	.	-	.	Parent=CGI_10024529;
	scaffold1097	WUBlastX	LINE_L1	417022	417900	36	-	.	.
scaffold1097	subtractBed	intrn	441829	442594	.	-	.	Parent=CGI_10024531;
	scaffold1097	TRF	Tandem_Repeat	441829	442594	1062	+	.	.
scaffold1097	subtractBed	intrn	577982	578242	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	577982	578242	42	+	.	.
scaffold1097	subtractBed	intrn	578318	578374	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	578318	578374	22	+	.	.
scaffold1097	subtractBed	intrn	576231	576530	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	576231	576530	79	+	.	.
scaffold1097	subtractBed	intrn	576359	577828	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	576359	577828	144	+	.	.
scaffold1097	subtractBed	intrn	577004	577849	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	577004	577849	205	+	.	.
scaffold1097	subtractBed	intrn	577862	578173	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	577862	578173	78	+	.	.
scaffold1097	subtractBed	intrn	575785	576003	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	575785	576003	107	+	.	.
scaffold1097	subtractBed	intrn	575649	575729	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	575649	575729	45	+	.	.
scaffold1097	subtractBed	intrn	578431	578562	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	578431	578562	31	+	.	.
scaffold1097	subtractBed	intrn	582168	582214	.	-	.	Parent=CGI_10024535;
	scaffold1097	TRF	Tandem_Repeat	582168	582214	58	+	.	.
scaffold1097	subtractBed	intrn	586169	586243	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	586169	586243	46	+	.	.
scaffold1097	subtractBed	intrn	586234	586599	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	586234	586599	71	+	.	.
scaffold1097	subtractBed	intrn	586109	586276	.	-	.	Parent=CGI_10024535;
	scaffold1097	WUBlastX	LTR_Ngaro	586109	586276	21	+	.	.
scaffold1097	subtractBed	intrn	621323	621364	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	621323	621364	84	+	.	.
scaffold1097	subtractBed	intrn	622657	622729	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	622657	622729	137	+	.	.
scaffold1097	subtractBed	intrn	623520	623652	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	623520	623652	221	+	.	.
scaffold1097	subtractBed	intrn	624451	624587	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	624451	624587	152	+	.	.
scaffold1097	subtractBed	intrn	632185	632223	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	632185	632223	69	+	.	.
scaffold1097	subtractBed	intrn	632178	632226	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	632178	632226	73	+	.	.
scaffold1097	subtractBed	intrn	634715	634770	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	634715	634770	112	+	.	.
scaffold1097	subtractBed	intrn	637129	637247	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	637129	637247	154	+	.	.
scaffold1097	subtractBed	intrn	637540	637713	.	-	.	Parent=CGI_10024538;
	scaffold1097	TRF	Tandem_Repeat	637540	637713	348	+	.	.
scaffold1097	subtractBed	intrn	674405	674451	.	+	.	Parent=CGI_10024541;
	scaffold1097	TRF	Tandem_Repeat	674405	674451	94	+	.	.
scaffold1097	subtractBed	intrn	681329	681991	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	681329	681991	161	-	.	.
scaffold1097	subtractBed	intrn	682613	682774	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_L1	682613	682774	23	-	.	.
scaffold1097	subtractBed	intrn	683183	683386	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	683183	683386	82	-	.	.
scaffold1097	subtractBed	intrn	683153	683311	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	683153	683311	88	-	.	.
scaffold1097	subtractBed	intrn	682490	682747	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	682490	682747	61	-	.	.
scaffold1097	subtractBed	intrn	683079	683210	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	683079	683210	57	-	.	.
scaffold1097	subtractBed	intrn	682203	682691	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_L1	682203	682691	111	-	.	.
scaffold1097	subtractBed	intrn	682176	682595	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	682176	682595	349	-	.	.
scaffold1097	subtractBed	intrn	683186	683347	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	683186	683347	87	-	.	.
scaffold1097	subtractBed	intrn	682786	683061	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	682786	683061	116	-	.	.
scaffold1097	subtractBed	intrn	682060	682173	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	682060	682173	60	-	.	.
scaffold1097	subtractBed	intrn	683204	683470	.	+	.	Parent=CGI_10024541;
	scaffold1097	WUBlastX	LINE_RTE-BovB	683204	683470	47	-	.	.
scaffold1097	subtractBed	intrn	707828	707876	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	707828	707876	98	+	.	.
scaffold1097	subtractBed	intrn	707940	708002	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	707940	708002	126	+	.	.
scaffold1097	subtractBed	intrn	712094	712612	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	712094	712612	318	+	.	.
scaffold1097	subtractBed	intrn	712602	713060	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	712602	713060	482	+	.	.
scaffold1097	subtractBed	intrn	713066	713845	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	713066	713845	452	+	.	.
scaffold1097	subtractBed	intrn	713820	714500	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	713820	714500	673	+	.	.
scaffold1097	subtractBed	intrn	712004	712180	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	712004	712180	84	+	.	.
scaffold1097	subtractBed	intrn	712031	712192	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-BovB	712031	712192	114	+	.	.
scaffold1097	subtractBed	intrn	715856	715914	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	715856	715914	63	+	.	.
scaffold1097	subtractBed	intrn	715849	715924	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	715849	715924	68	+	.	.
scaffold1097	subtractBed	intrn	715856	715922	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	715856	715922	64	+	.	.
scaffold1097	subtractBed	intrn	715860	715921	.	-	.	Parent=CGI_10024542;
	scaffold1097	TRF	Tandem_Repeat	715860	715921	61	+	.	.
scaffold1097	subtractBed	intrn	717557	717940	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-X	717557	717940	22	-	.	.
scaffold1097	subtractBed	intrn	717740	718000	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-X	717740	718000	102	-	.	.
scaffold1097	subtractBed	intrn	718009	718314	.	-	.	Parent=CGI_10024542;
	scaffold1097	WUBlastX	LINE_RTE-X	718009	718314	105	-	.	.
scaffold1097	subtractBed	intrn	727824	727867	.	+	.	Parent=CGI_10024543;
	scaffold1097	TRF	Tandem_Repeat	727824	727867	88	+	.	.
scaffold1097	subtractBed	intrn	731471	731526	.	+	.	Parent=CGI_10024543;
	scaffold1097	TRF	Tandem_Repeat	731471	731526	112	+	.	.
scaffold1097	subtractBed	intrn	746399	746431	.	-	.	Parent=CGI_10024544;
	scaffold1097	TRF	Tandem_Repeat	746399	746431	57	+	.	.
scaffold1097	subtractBed	intrn	766018	766445	.	-	.	Parent=CGI_10024547;
	scaffold1097	TRF	Tandem_Repeat	766018	766445	678	+	.	.
scaffold1097	subtractBed	intrn	766018	767164	.	-	.	Parent=CGI_10024547;
	scaffold1097	TRF	Tandem_Repeat	766018	767164	1630	+	.	.
scaffold1097	subtractBed	intrn	766018	767164	.	-	.	Parent=CGI_10024547;
	scaffold1097	TRF	Tandem_Repeat	766018	767164	1668	+	.	.
scaffold1097	subtractBed	intrn	766449	767164	.	-	.	Parent=CGI_10024547;
	scaffold1097	TRF	Tandem_Repeat	766449	767164	1101	+	.	.
scaffold1097	subtractBed	intrn	772589	773369	.	+	.	Parent=CGI_10024548;
	scaffold1097	TRF	Tandem_Repeat	772589	773413	1035	+	.	.
scaffold1097	subtractBed	intrn	781811	781877	.	-	.	Parent=CGI_10024549;
	scaffold1097	TRF	Tandem_Repeat	781811	781877	127	+	.	.
scaffold1097	subtractBed	intrn	784459	784548	.	-	.	Parent=CGI_10024549;
	scaffold1097	TRF	Tandem_Repeat	784459	784548	82	+	.	.
scaffold1097	subtractBed	intrn	796685	796759	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796685	796759	46	+	.	.
scaffold1097	subtractBed	intrn	796801	797208	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796801	797208	20	+	.	.
scaffold1097	subtractBed	intrn	797746	797946	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797746	797946	22	+	.	.
scaffold1097	subtractBed	intrn	797312	797470	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797312	797470	56	+	.	.
scaffold1097	subtractBed	intrn	797549	797707	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797549	797707	56	+	.	.
scaffold1097	subtractBed	intrn	796658	796750	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796658	796750	41	+	.	.
scaffold1097	subtractBed	intrn	796960	797088	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796960	797088	51	+	.	.
scaffold1097	subtractBed	intrn	796933	797088	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796933	797088	26	+	.	.
scaffold1097	subtractBed	intrn	797282	797473	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797282	797473	30	+	.	.
scaffold1097	subtractBed	intrn	797519	797710	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797519	797710	30	+	.	.
scaffold1097	subtractBed	intrn	796960	797379	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	796960	797379	22	+	.	.
scaffold1097	subtractBed	intrn	797746	797889	.	+	.	Parent=CGI_10024550;
	scaffold1097	WUBlastX	LINE_RTE-X	797746	797889	44	+	.	.
scaffold1097	subtractBed	intrn	803175	803354	.	-	.	Parent=CGI_10024551;
	scaffold1097	TRF	Tandem_Repeat	803175	803354	330	+	.	.
scaffold1097	subtractBed	intrn	848317	848356	.	+	.	Parent=CGI_10024555;
	scaffold1097	TRF	Tandem_Repeat	848317	848356	80	+	.	.
scaffold1097	subtractBed	intrn	854901	855441	.	+	.	Parent=CGI_10024555;
	scaffold1097	TRF	Tandem_Repeat	854901	855441	581	+	.	.
scaffold1097	subtractBed	intrn	854901	855442	.	+	.	Parent=CGI_10024555;
	scaffold1097	TRF	Tandem_Repeat	854901	855442	684	+	.	.
scaffold1097	subtractBed	intrn	857652	857831	.	+	.	Parent=CGI_10024555;
	scaffold1097	TRF	Tandem_Repeat	857652	857831	112	+	.	.
scaffold1097	subtractBed	intrn	857631	857835	.	+	.	Parent=CGI_10024555;
	scaffold1097	TRF	Tandem_Repeat	857631	857835	158	+	.	.
scaffold1097	subtractBed	intrn	862480	863040	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy-Cigr	862480	863040	137	+	.	.
scaffold1097	subtractBed	intrn	862480	863232	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	862480	863232	123	+	.	.
scaffold1097	subtractBed	intrn	863298	863597	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	863298	863597	20	+	.	.
scaffold1097	subtractBed	intrn	861518	861784	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	861518	861784	102	+	.	.
scaffold1097	subtractBed	intrn	860173	860310	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	860173	860310	23	+	.	.
scaffold1097	subtractBed	intrn	861771	862169	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	861771	862169	123	+	.	.
scaffold1097	subtractBed	intrn	862264	862935	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	862264	862935	133	+	.	.
scaffold1097	subtractBed	intrn	860522	860620	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	860522	860620	22	+	.	.
scaffold1097	subtractBed	intrn	860531	860614	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	860531	860614	23	+	.	.
scaffold1097	subtractBed	intrn	860831	861721	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	860831	861721	293	+	.	.
scaffold1097	subtractBed	intrn	862489	862953	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	862489	862953	165	+	.	.
scaffold1097	subtractBed	intrn	863337	863507	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	863337	863507	37	+	.	.
scaffold1097	subtractBed	intrn	861771	862253	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	861771	862253	68	+	.	.
scaffold1097	subtractBed	intrn	862384	862938	.	+	.	Parent=CGI_10024555;
	scaffold1097	WUBlastX	LTR_Gypsy	862384	862938	162	+	.	.
scaffold1097	subtractBed	intrn	873907	873948	.	+	.	Parent=CGI_10024556;
	scaffold1097	TRF	Tandem_Repeat	873907	873948	84	+	.	.
scaffold1097	subtractBed	intrn	878456	878523	.	+	.	Parent=CGI_10024557;
	scaffold1097	TRF	Tandem_Repeat	878456	878523	136	+	.	.
scaffold1097	subtractBed	intrn	880371	880517	.	+	.	Parent=CGI_10024557;
	scaffold1097	TRF	Tandem_Repeat	880371	880517	125	+	.	.
scaffold1097	subtractBed	intrn	880808	881508	.	+	.	Parent=CGI_10024557;
	scaffold1097	TRF	Tandem_Repeat	880808	881508	955	+	.	.
scaffold1098	subtractBed	intrn	8886	8910	.	+	.	Parent=CGI_10010793;
	scaffold1098	TRF	Tandem_Repeat	8886	8910	50	+	.	.
scaffold1098	subtractBed	intrn	17695	18844	.	+	.	Parent=CGI_10010793;
	scaffold1098	TRF	Tandem_Repeat	17695	18844	331	+	.	.
scaffold1098	subtractBed	intrn	17695	18840	.	+	.	Parent=CGI_10010793;
	scaffold1098	TRF	Tandem_Repeat	17695	18840	325	+	.	.
scaffold1098	subtractBed	intrn	18615	18844	.	+	.	Parent=CGI_10010793;
	scaffold1098	TRF	Tandem_Repeat	18615	18844	122	+	.	.
scaffold1098	subtractBed	intrn	19241	19300	.	+	.	Parent=CGI_10010793;
	scaffold1098	TRF	Tandem_Repeat	19241	19300	93	+	.	.
scaffold1098	subtractBed	intrn	71922	71953	.	-	.	Parent=CGI_10010795;
	scaffold1098	TRF	Tandem_Repeat	71922	71953	55	+	.	.
scaffold1098	subtractBed	intrn	70635	70973	.	-	.	Parent=CGI_10010795;
	scaffold1098	WUBlastX	LTR_Pao	70635	70973	109	+	.	.
scaffold1098	subtractBed	intrn	71145	71708	.	-	.	Parent=CGI_10010795;
	scaffold1098	WUBlastX	LTR_Pao	71145	71708	270	+	.	.
scaffold1098	subtractBed	intrn	70554	70937	.	-	.	Parent=CGI_10010795;
	scaffold1098	WUBlastX	LTR_Pao	70554	70937	23	+	.	.
scaffold1098	subtractBed	intrn	127313	127313	.	-	.	Parent=CGI_10010797;
	scaffold1098	WUBlastX	DNA_Sola	127185	127313	26	-	.	.
scaffold1098	subtractBed	intrn	127368	127387	.	-	.	Parent=CGI_10010797;
	scaffold1098	WUBlastX	DNA_Sola	127368	127688	53	-	.	.
scaffold1098	subtractBed	intrn	230208	230241	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	230208	230241	68	+	.	.
scaffold1098	subtractBed	intrn	232841	232948	.	-	.	Parent=CGI_10010798;
	scaffold1098	WUBlastX	DNA_TcMar-Marin	232841	232948	55	+	.	.
scaffold1098	subtractBed	intrn	242788	242851	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	242788	242851	128	+	.	.
scaffold1098	subtractBed	intrn	242849	242895	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	242849	242895	94	+	.	.
scaffold1098	subtractBed	intrn	246102	246189	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	246102	246189	90	+	.	.
scaffold1098	subtractBed	intrn	254147	254256	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	254147	254256	60	+	.	.
scaffold1098	subtractBed	intrn	259040	259096	.	-	.	Parent=CGI_10010798;
	scaffold1098	TRF	Tandem_Repeat	259040	259096	114	+	.	.
scaffold1098	subtractBed	intrn	264772	264939	.	-	.	Parent=CGI_10010798;
	scaffold1098	WUBlastX	DNA_TcMar-Tc1	264772	264939	71	+	.	.
scaffold1098	subtractBed	intrn	264953	265330	.	-	.	Parent=CGI_10010798;
	scaffold1098	WUBlastX	DNA_TcMar-Tc1	264953	265330	153	+	.	.
scaffold11	subtractBed	intrn	61413	61685	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy-Cigr	61413	61685	186	-	.	.
scaffold11	subtractBed	intrn	61843	62247	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy	61843	62247	73	-	.	.
scaffold11	subtractBed	intrn	61353	61673	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy	61353	61673	131	-	.	.
scaffold11	subtractBed	intrn	61413	61736	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy	61413	61736	167	-	.	.
scaffold11	subtractBed	intrn	61407	61811	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy	61407	61811	78	-	.	.
scaffold11	subtractBed	intrn	62876	63289	.	-	.	Parent=CGI_10015522;
	scaffold11	WUBlastX	LTR_Gypsy	62876	63289	87	-	.	.
scaffold11	subtractBed	intrn	121777	121967	.	+	.	Parent=CGI_10015525;
	scaffold11	TRF	Tandem_Repeat	121777	121967	164	+	.	.
scaffold11	subtractBed	intrn	139476	139531	.	-	.	Parent=CGI_10015527;
	scaffold11	TRF	Tandem_Repeat	139476	139531	66	+	.	.
scaffold11	subtractBed	intrn	269027	269076	.	-	.	Parent=CGI_10015534;
	scaffold11	TRF	Tandem_Repeat	269027	269076	100	+	.	.
scaffold11	subtractBed	intrn	270763	270816	.	-	.	Parent=CGI_10015534;
	scaffold11	TRF	Tandem_Repeat	270763	270816	56	+	.	.
scaffold11	subtractBed	intrn	272428	273033	.	-	.	Parent=CGI_10015534;
	scaffold11	TRF	Tandem_Repeat	272428	273055	353	+	.	.
scaffold11	subtractBed	intrn	307287	307328	.	-	.	Parent=CGI_10015535;
	scaffold11	TRF	Tandem_Repeat	307287	307328	66	+	.	.
scaffold11	subtractBed	intrn	310670	310734	.	-	.	Parent=CGI_10015535;
	scaffold11	TRF	Tandem_Repeat	310670	310734	130	+	.	.
scaffold11	subtractBed	intrn	360613	360930	.	-	.	Parent=CGI_10015539;
	scaffold11	TRF	Tandem_Repeat	360603	360930	503	+	.	.
scaffold11	subtractBed	intrn	363182	363736	.	-	.	Parent=CGI_10015539;
	scaffold11	TRF	Tandem_Repeat	363182	363777	946	+	.	.
scaffold11	subtractBed	intrn	368663	369047	.	-	.	Parent=CGI_10015539;
	scaffold11	TRF	Tandem_Repeat	368663	369047	452	+	.	.
scaffold11	subtractBed	intrn	377038	377091	.	+	.	Parent=CGI_10015540;
	scaffold11	TRF	Tandem_Repeat	377038	377091	65	+	.	.
scaffold11	subtractBed	intrn	377038	377094	.	+	.	Parent=CGI_10015540;
	scaffold11	TRF	Tandem_Repeat	377038	377094	80	+	.	.
scaffold11	subtractBed	intrn	419958	421477	.	-	.	Parent=CGI_10015542;
	scaffold11	TRF	Tandem_Repeat	419958	421477	1890	+	.	.
scaffold110	subtractBed	intrn	7683	7860	.	+	.	Parent=CGI_10008773;
	scaffold110	TRF	Tandem_Repeat	7683	7860	287	+	.	.
scaffold110	subtractBed	intrn	27904	27991	.	-	.	Parent=CGI_10008774;
	scaffold110	TRF	Tandem_Repeat	27904	27991	167	+	.	.
scaffold110	subtractBed	intrn	29217	29254	.	-	.	Parent=CGI_10008774;
	scaffold110	TRF	Tandem_Repeat	29217	29254	76	+	.	.
scaffold110	subtractBed	intrn	40232	40320	.	-	.	Parent=CGI_10008775;
	scaffold110	TRF	Tandem_Repeat	40232	40320	61	+	.	.
scaffold110	subtractBed	intrn	40294	40328	.	-	.	Parent=CGI_10008775;
	scaffold110	TRF	Tandem_Repeat	40294	40328	70	+	.	.
scaffold110	subtractBed	intrn	54804	54861	.	-	.	Parent=CGI_10008776;
	scaffold110	TRF	Tandem_Repeat	54804	54861	82	+	.	.
scaffold110	subtractBed	intrn	56085	57333	.	-	.	Parent=CGI_10008776;
	scaffold110	TRF	Tandem_Repeat	56085	57333	1781	+	.	.
scaffold110	subtractBed	intrn	133833	133866	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	133833	133866	52	+	.	.
scaffold110	subtractBed	intrn	133834	133890	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	133834	133890	60	+	.	.
scaffold110	subtractBed	intrn	133834	133890	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	133834	133890	51	+	.	.
scaffold110	subtractBed	intrn	137015	137105	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	137015	137105	94	+	.	.
scaffold110	subtractBed	intrn	148456	148529	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	148456	148529	73	+	.	.
scaffold110	subtractBed	intrn	148456	148529	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	148456	148529	60	+	.	.
scaffold110	subtractBed	intrn	155200	155244	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	155200	155244	90	+	.	.
scaffold110	subtractBed	intrn	159738	159779	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	159738	159779	75	+	.	.
scaffold110	subtractBed	intrn	170577	170696	.	+	.	Parent=CGI_10008780;
	scaffold110	TRF	Tandem_Repeat	170577	170696	188	+	.	.
scaffold110	subtractBed	intrn	148456	148529	.	-	.	Parent=CGI_10008781;
	scaffold110	TRF	Tandem_Repeat	148456	148529	73	+	.	.
scaffold110	subtractBed	intrn	148456	148529	.	-	.	Parent=CGI_10008781;
	scaffold110	TRF	Tandem_Repeat	148456	148529	60	+	.	.
scaffold1100	subtractBed	intrn	1015	1046	.	-	.	Parent=CGI_10009423;
	scaffold1100	TRF	Tandem_Repeat	1015	1046	64	+	.	.
scaffold1100	subtractBed	intrn	1162	1447	.	-	.	Parent=CGI_10009423;
	scaffold1100	TRF	Tandem_Repeat	1162	1465	219	+	.	.
scaffold1100	subtractBed	intrn	1163	1447	.	-	.	Parent=CGI_10009423;
	scaffold1100	TRF	Tandem_Repeat	1163	1465	285	+	.	.
scaffold1100	subtractBed	intrn	2370	2678	.	-	.	Parent=CGI_10009423;
	scaffold1100	TRF	Tandem_Repeat	2370	2678	236	+	.	.
scaffold1100	subtractBed	intrn	2370	2678	.	-	.	Parent=CGI_10009423;
	scaffold1100	TRF	Tandem_Repeat	2370	2678	311	+	.	.
scaffold1100	subtractBed	intrn	16447	17264	.	+	.	Parent=CGI_10009424;
	scaffold1100	TRF	Tandem_Repeat	16447	17264	997	+	.	.
scaffold1100	subtractBed	intrn	17481	18079	.	+	.	Parent=CGI_10009424;
	scaffold1100	TRF	Tandem_Repeat	17481	18079	905	+	.	.
scaffold1100	subtractBed	intrn	17481	18079	.	+	.	Parent=CGI_10009424;
	scaffold1100	TRF	Tandem_Repeat	17481	18079	967	+	.	.
scaffold1100	subtractBed	intrn	16308	17264	.	+	.	Parent=CGI_10009424;
	scaffold1100	TRF	Tandem_Repeat	16308	17264	1087	+	.	.
scaffold1100	subtractBed	intrn	20494	20686	.	+	.	Parent=CGI_10009424;
	scaffold1100	TRF	Tandem_Repeat	20494	20686	248	+	.	.
scaffold1100	subtractBed	intrn	26325	27091	.	-	.	Parent=CGI_10009425;
	scaffold1100	TRF	Tandem_Repeat	26319	27091	994	+	.	.
scaffold1100	subtractBed	intrn	28144	28778	.	-	.	Parent=CGI_10009425;
	scaffold1100	TRF	Tandem_Repeat	28144	28778	1055	+	.	.
scaffold1100	subtractBed	intrn	28144	28778	.	-	.	Parent=CGI_10009425;
	scaffold1100	TRF	Tandem_Repeat	28144	28778	1180	+	.	.
scaffold1100	subtractBed	intrn	30683	30925	.	-	.	Parent=CGI_10009425;
	scaffold1100	TRF	Tandem_Repeat	30683	30925	112	+	.	.
scaffold1100	subtractBed	intrn	51428	51475	.	-	.	Parent=CGI_10009427;
	scaffold1100	TRF	Tandem_Repeat	51428	51475	69	+	.	.
scaffold1100	subtractBed	intrn	131621	131674	.	+	.	Parent=CGI_10009432;
	scaffold1100	TRF	Tandem_Repeat	131621	131674	108	+	.	.
scaffold1100	subtractBed	intrn	148489	148533	.	-	.	Parent=CGI_10009433;
	scaffold1100	TRF	Tandem_Repeat	148489	148533	90	+	.	.
scaffold1100	subtractBed	intrn	153557	154634	.	+	.	Parent=CGI_10009434;
	scaffold1100	TRF	Tandem_Repeat	153557	154634	1599	+	.	.
scaffold1100	subtractBed	intrn	202953	203014	.	-	.	Parent=CGI_10009438;
	scaffold1100	TRF	Tandem_Repeat	202953	203014	99	+	.	.
scaffold1101	subtractBed	intrn	41807	41904	.	+	.	Parent=CGI_10023010;
	scaffold1101	TRF	Tandem_Repeat	41807	41904	72	+	.	.
scaffold1101	subtractBed	intrn	146323	146362	.	+	.	Parent=CGI_10023014;
	scaffold1101	TRF	Tandem_Repeat	146323	146362	80	+	.	.
scaffold1101	subtractBed	intrn	146894	146928	.	+	.	Parent=CGI_10023014;
	scaffold1101	TRF	Tandem_Repeat	146894	146928	70	+	.	.
scaffold1101	subtractBed	intrn	152987	153048	.	+	.	Parent=CGI_10023014;
	scaffold1101	TRF	Tandem_Repeat	152987	153048	117	+	.	.
scaffold1101	subtractBed	intrn	153048	153084	.	+	.	Parent=CGI_10023014;
	scaffold1101	TRF	Tandem_Repeat	153048	153084	56	+	.	.
scaffold1101	subtractBed	intrn	149152	149430	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	149152	149430	165	-	.	.
scaffold1101	subtractBed	intrn	148275	148484	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	148275	148484	50	-	.	.
scaffold1101	subtractBed	intrn	149559	151016	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	149559	151016	204	-	.	.
scaffold1101	subtractBed	intrn	151151	151696	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_CR1	151151	151696	43	-	.	.
scaffold1101	subtractBed	intrn	151166	151576	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	151166	151576	122	-	.	.
scaffold1101	subtractBed	intrn	148502	149179	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	148502	149179	223	-	.	.
scaffold1101	subtractBed	intrn	149529	150512	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	149529	150512	257	-	.	.
scaffold1101	subtractBed	intrn	151037	151522	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_L2	151037	151522	27	-	.	.
scaffold1101	subtractBed	intrn	151725	151877	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_L1	151725	151877	64	-	.	.
scaffold1101	subtractBed	intrn	149005	149589	.	+	.	Parent=CGI_10023014;
	scaffold1101	WUBlastX	LINE_RTE-X	149005	149589	139	-	.	.
scaffold1101	subtractBed	intrn	165150	165179	.	+	.	Parent=CGI_10023015;
	scaffold1101	TRF	Tandem_Repeat	165150	165179	60	+	.	.
scaffold1101	subtractBed	intrn	165150	165179	.	-	.	Parent=CGI_10023016;
	scaffold1101	TRF	Tandem_Repeat	165150	165179	60	+	.	.
scaffold1101	subtractBed	intrn	170297	170347	.	-	.	Parent=CGI_10023016;
	scaffold1101	TRF	Tandem_Repeat	170297	170347	102	+	.	.
scaffold1101	subtractBed	intrn	178044	178138	.	-	.	Parent=CGI_10023016;
	scaffold1101	TRF	Tandem_Repeat	178044	178138	181	+	.	.
scaffold1101	subtractBed	intrn	178044	178138	.	+	.	Parent=CGI_10023017;
	scaffold1101	TRF	Tandem_Repeat	178044	178138	181	+	.	.
scaffold1101	subtractBed	intrn	184677	184738	.	+	.	Parent=CGI_10023018;
	scaffold1101	TRF	Tandem_Repeat	184677	184738	124	+	.	.
scaffold1101	subtractBed	intrn	289139	289197	.	+	.	Parent=CGI_10023022;
	scaffold1101	TRF	Tandem_Repeat	289139	289197	84	+	.	.
scaffold1101	subtractBed	intrn	314987	315892	.	+	.	Parent=CGI_10023022;
	scaffold1101	TRF	Tandem_Repeat	314987	315892	1110	+	.	.
scaffold1101	subtractBed	intrn	317224	317574	.	+	.	Parent=CGI_10023022;
	scaffold1101	TRF	Tandem_Repeat	317224	317574	373	+	.	.
scaffold1101	subtractBed	intrn	317224	317574	.	+	.	Parent=CGI_10023022;
	scaffold1101	TRF	Tandem_Repeat	317224	317574	397	+	.	.
scaffold1101	subtractBed	intrn	370711	370899	.	+	.	Parent=CGI_10023023;
	scaffold1101	WUBlastX	LINE_CR1-L2	370711	370899	32	+	.	.
scaffold1101	subtractBed	intrn	370895	371110	.	+	.	Parent=CGI_10023023;
	scaffold1101	WUBlastX	LINE_CR1-L2	370895	371110	42	+	.	.
scaffold1101	subtractBed	intrn	384328	384374	.	+	.	Parent=CGI_10023023;
	scaffold1101	TRF	Tandem_Repeat	384328	384374	94	+	.	.
scaffold1101	subtractBed	intrn	424563	424911	.	-	.	Parent=CGI_10023024;
	scaffold1101	TRF	Tandem_Repeat	424563	424911	479	+	.	.
scaffold1101	subtractBed	intrn	432846	432903	.	+	.	Parent=CGI_10023025;
	scaffold1101	TRF	Tandem_Repeat	432846	432903	109	+	.	.
scaffold1101	subtractBed	intrn	435546	435575	.	+	.	Parent=CGI_10023026;
	scaffold1101	TRF	Tandem_Repeat	435546	435575	60	+	.	.
scaffold1101	subtractBed	intrn	439028	439073	.	+	.	Parent=CGI_10023026;
	scaffold1101	TRF	Tandem_Repeat	439028	439073	92	+	.	.
scaffold1101	subtractBed	intrn	522888	522974	.	+	.	Parent=CGI_10023031;
	scaffold1101	TRF	Tandem_Repeat	522888	522974	174	+	.	.
scaffold1101	subtractBed	intrn	523650	523692	.	+	.	Parent=CGI_10023031;
	scaffold1101	TRF	Tandem_Repeat	523650	523692	70	+	.	.
scaffold1101	subtractBed	intrn	525502	525591	.	+	.	Parent=CGI_10023031;
	scaffold1101	TRF	Tandem_Repeat	525502	525591	180	+	.	.
scaffold1101	subtractBed	intrn	526937	527332	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	526937	527332	234	-	.	.
scaffold1101	subtractBed	intrn	527647	528003	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	527647	528003	89	-	.	.
scaffold1101	subtractBed	intrn	526934	527578	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	526934	527578	178	-	.	.
scaffold1101	subtractBed	intrn	526940	527434	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	526940	527434	199	-	.	.
scaffold1101	subtractBed	intrn	525636	526922	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	525636	526922	236	-	.	.
scaffold1101	subtractBed	intrn	527659	528369	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	527659	528369	61	-	.	.
scaffold1101	subtractBed	intrn	526248	526928	.	+	.	Parent=CGI_10023031;
	scaffold1101	WUBlastX	LINE_RTE-X	526248	526928	238	-	.	.
scaffold1101	subtractBed	intrn	533766	533801	.	+	.	Parent=CGI_10023031;
	scaffold1101	TRF	Tandem_Repeat	533766	533801	72	+	.	.
scaffold1101	subtractBed	intrn	540198	540264	.	+	.	Parent=CGI_10023032;
	scaffold1101	TRF	Tandem_Repeat	540198	540264	125	+	.	.
scaffold1101	subtractBed	intrn	539358	540164	.	+	.	Parent=CGI_10023032;
	scaffold1101	WUBlastX	DNA_IS4EU	539358	540164	57	+	.	.
scaffold1101	subtractBed	intrn	539583	540164	.	+	.	Parent=CGI_10023032;
	scaffold1101	WUBlastX	DNA_Kolobok-IS4	539583	540164	73	+	.	.
scaffold1101	subtractBed	intrn	540354	540479	.	+	.	Parent=CGI_10023032;
	scaffold1101	WUBlastX	DNA_IS4EU	540354	540479	37	+	.	.
scaffold1101	subtractBed	intrn	539772	540164	.	+	.	Parent=CGI_10023032;
	scaffold1101	WUBlastX	DNA_IS4EU	539772	540164	88	+	.	.
scaffold1101	subtractBed	intrn	676508	676533	.	+	.	Parent=CGI_10023033;
	scaffold1101	TRF	Tandem_Repeat	676508	676533	52	+	.	.
scaffold1101	subtractBed	intrn	677610	677634	.	+	.	Parent=CGI_10023033;
	scaffold1101	TRF	Tandem_Repeat	677610	677634	50	+	.	.
scaffold1101	subtractBed	intrn	770931	770962	.	-	.	Parent=CGI_10023034;
	scaffold1101	TRF	Tandem_Repeat	770931	770962	64	+	.	.
scaffold1103	subtractBed	intrn	12576	12944	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	12576	12944	43	+	.	.
scaffold1103	subtractBed	intrn	12507	12890	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_CR1	12507	12890	21	+	.	.
scaffold1103	subtractBed	intrn	13836	14642	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	13836	14642	595	+	.	.
scaffold1103	subtractBed	intrn	14639	15520	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	14639	15520	457	+	.	.
scaffold1103	subtractBed	intrn	12970	13848	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	12970	13848	448	+	.	.
scaffold1103	subtractBed	intrn	12648	12971	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	12648	12971	83	+	.	.
scaffold1103	subtractBed	intrn	11747	11803	.	-	.	Parent=CGI_10004868;
	scaffold1103	WUBlastX	LINE_L2	11747	11803	21	+	.	.
scaffold1103	subtractBed	intrn	101428	101502	.	+	.	Parent=CGI_10004873;
	scaffold1103	TRF	Tandem_Repeat	101428	101502	143	+	.	.
scaffold1103	subtractBed	intrn	103078	103110	.	+	.	Parent=CGI_10004873;
	scaffold1103	TRF	Tandem_Repeat	103078	103110	66	+	.	.
scaffold1104	subtractBed	intrn	2567	2666	.	-	.	Parent=CGI_10020349;
	scaffold1104	TRF	Tandem_Repeat	2567	2666	96	+	.	.
scaffold1104	subtractBed	intrn	16515	16627	.	+	.	Parent=CGI_10020351;
	scaffold1104	TRF	Tandem_Repeat	16515	16627	130	+	.	.
scaffold1104	subtractBed	intrn	16515	16626	.	+	.	Parent=CGI_10020351;
	scaffold1104	TRF	Tandem_Repeat	16515	16626	163	+	.	.
scaffold1104	subtractBed	intrn	16515	16627	.	+	.	Parent=CGI_10020351;
	scaffold1104	TRF	Tandem_Repeat	16515	16627	122	+	.	.
scaffold1104	subtractBed	intrn	22501	22690	.	+	.	Parent=CGI_10020351;
	scaffold1104	TRF	Tandem_Repeat	22498	22690	242	+	.	.
scaffold1104	subtractBed	intrn	22501	22690	.	+	.	Parent=CGI_10020351;
	scaffold1104	TRF	Tandem_Repeat	22498	22690	271	+	.	.
scaffold1104	subtractBed	intrn	74200	75387	.	+	.	Parent=CGI_10020353;
	scaffold1104	TRF	Tandem_Repeat	74200	75387	1765	+	.	.
scaffold1104	subtractBed	intrn	80158	81195	.	+	.	Parent=CGI_10020353;
	scaffold1104	WUBlastX	DNA_TcMar-Tc1	80158	81195	431	-	.	.
scaffold1104	subtractBed	intrn	98869	98906	.	-	.	Parent=CGI_10020354;
	scaffold1104	TRF	Tandem_Repeat	98869	98906	58	+	.	.
scaffold1104	subtractBed	intrn	125412	125487	.	-	.	Parent=CGI_10020357;
	scaffold1104	TRF	Tandem_Repeat	125412	125487	55	+	.	.
scaffold1104	subtractBed	intrn	135713	135779	.	+	.	Parent=CGI_10020358;
	scaffold1104	TRF	Tandem_Repeat	135713	135779	134	+	.	.
scaffold1104	subtractBed	intrn	164224	164289	.	+	.	Parent=CGI_10020361;
	scaffold1104	WUBlastX	LINE_RTE-BovB	164224	164289	24	+	.	.
scaffold1104	subtractBed	intrn	165952	167313	.	+	.	Parent=CGI_10020361;
	scaffold1104	WUBlastX	LINE_RTE-X	165952	167313	377	+	.	.
scaffold1104	subtractBed	intrn	165090	165974	.	+	.	Parent=CGI_10020361;
	scaffold1104	WUBlastX	LINE_RTE-X	165090	165974	403	+	.	.
scaffold1104	subtractBed	intrn	164239	165129	.	+	.	Parent=CGI_10020361;
	scaffold1104	WUBlastX	LINE_RTE-X	164239	165129	281	+	.	.
scaffold1104	subtractBed	intrn	168249	168659	.	+	.	Parent=CGI_10020361;
	scaffold1104	WUBlastX	DNA_hAT-hATw	168249	168659	85	-	.	.
scaffold1104	subtractBed	intrn	224057	224102	.	+	.	Parent=CGI_10020366;
	scaffold1104	TRF	Tandem_Repeat	224057	224102	92	+	.	.
scaffold1104	subtractBed	intrn	224760	224807	.	+	.	Parent=CGI_10020366;
	scaffold1104	TRF	Tandem_Repeat	224760	224807	96	+	.	.
scaffold1104	subtractBed	intrn	261512	261536	.	-	.	Parent=CGI_10020369;
	scaffold1104	TRF	Tandem_Repeat	261512	261536	50	+	.	.
scaffold1104	subtractBed	intrn	266964	267050	.	-	.	Parent=CGI_10020369;
	scaffold1104	TRF	Tandem_Repeat	266964	267050	113	+	.	.
scaffold1104	subtractBed	intrn	267144	267317	.	-	.	Parent=CGI_10020369;
	scaffold1104	TRF	Tandem_Repeat	267144	267317	154	+	.	.
scaffold1104	subtractBed	intrn	267344	267564	.	-	.	Parent=CGI_10020369;
	scaffold1104	TRF	Tandem_Repeat	267344	267564	228	+	.	.
scaffold1104	subtractBed	intrn	272548	272595	.	+	.	Parent=CGI_10020370;
	scaffold1104	TRF	Tandem_Repeat	272548	272595	96	+	.	.
scaffold1104	subtractBed	intrn	344669	344694	.	+	.	Parent=CGI_10020376;
	scaffold1104	TRF	Tandem_Repeat	344669	344694	52	+	.	.
scaffold1104	subtractBed	intrn	366100	366137	.	+	.	Parent=CGI_10020378;
	scaffold1104	TRF	Tandem_Repeat	366100	366137	76	+	.	.
scaffold1104	subtractBed	intrn	367571	367616	.	+	.	Parent=CGI_10020378;
	scaffold1104	TRF	Tandem_Repeat	367571	367616	85	+	.	.
scaffold1104	subtractBed	intrn	391470	392162	.	-	.	Parent=CGI_10020381;
	scaffold1104	TRF	Tandem_Repeat	391470	392162	1054	+	.	.
scaffold1104	subtractBed	intrn	392162	393043	.	-	.	Parent=CGI_10020381;
	scaffold1104	TRF	Tandem_Repeat	392162	393043	1281	+	.	.
scaffold1104	subtractBed	intrn	406337	406412	.	-	.	Parent=CGI_10020382;
	scaffold1104	TRF	Tandem_Repeat	406337	406412	89	+	.	.
scaffold1104	subtractBed	intrn	420341	420365	.	-	.	Parent=CGI_10020382;
	scaffold1104	TRF	Tandem_Repeat	420341	420365	50	+	.	.
scaffold1104	subtractBed	intrn	420700	420736	.	-	.	Parent=CGI_10020382;
	scaffold1104	TRF	Tandem_Repeat	420700	420736	74	+	.	.
scaffold1104	subtractBed	intrn	453207	453255	.	+	.	Parent=CGI_10020387;
	scaffold1104	TRF	Tandem_Repeat	453207	453255	98	+	.	.
scaffold1104	subtractBed	intrn	472308	472367	.	-	.	Parent=CGI_10020388;
	scaffold1104	TRF	Tandem_Repeat	472308	472367	120	+	.	.
scaffold1104	subtractBed	intrn	517496	518449	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	LINE_CR1	517496	518449	599	+	.	.
scaffold1104	subtractBed	intrn	516130	517539	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	LINE_CR1	516130	517539	852	+	.	.
scaffold1104	subtractBed	intrn	526370	526582	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	DNA_Kolobok-IS4	526370	526582	71	-	.	.
scaffold1104	subtractBed	intrn	526054	526491	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	DNA_IS4EU	526054	526491	94	-	.	.
scaffold1104	subtractBed	intrn	526457	526663	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	DNA_IS4EU	526457	526663	70	-	.	.
scaffold1104	subtractBed	intrn	525979	526422	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	DNA_IS4EU	525979	526422	182	-	.	.
scaffold1104	subtractBed	intrn	527309	528067	.	-	.	Parent=CGI_10020391;
	scaffold1104	WUBlastX	DNA_Kolobok-IS4	527309	528067	309	+	.	.
scaffold1104	subtractBed	intrn	526370	526582	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_Kolobok-IS4	526370	526582	71	-	.	.
scaffold1104	subtractBed	intrn	526054	526491	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_IS4EU	526054	526491	94	-	.	.
scaffold1104	subtractBed	intrn	526457	526663	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_IS4EU	526457	526663	70	-	.	.
scaffold1104	subtractBed	intrn	525979	526422	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_IS4EU	525979	526422	182	-	.	.
scaffold1104	subtractBed	intrn	527309	528067	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_Kolobok-IS4	527309	528067	309	+	.	.
scaffold1104	subtractBed	intrn	529086	529271	.	+	.	Parent=CGI_10020392;
	scaffold1104	WUBlastX	DNA_IS4EU	529086	529271	69	-	.	.
scaffold1104	subtractBed	intrn	606591	606626	.	+	.	Parent=CGI_10020394;
	scaffold1104	TRF	Tandem_Repeat	606591	606626	72	+	.	.
scaffold1104	subtractBed	intrn	611322	611360	.	+	.	Parent=CGI_10020394;
	scaffold1104	TRF	Tandem_Repeat	611322	611360	69	+	.	.
scaffold1104	subtractBed	intrn	624784	624835	.	+	.	Parent=CGI_10020396;
	scaffold1104	TRF	Tandem_Repeat	624784	624835	77	+	.	.
scaffold1106	subtractBed	intrn	7010	7039	.	-	.	Parent=CGI_10002424;
	scaffold1106	TRF	Tandem_Repeat	7010	7039	51	+	.	.
scaffold1106	subtractBed	intrn	14276	14970	.	+	.	Parent=CGI_10002425;
	scaffold1106	TRF	Tandem_Repeat	14276	14970	556	+	.	.
scaffold1106	subtractBed	intrn	14129	14251	.	+	.	Parent=CGI_10002425;
	scaffold1106	WUBlastX	LINE_L1	14129	14251	38	-	.	.
scaffold1106	subtractBed	intrn	13929	14030	.	+	.	Parent=CGI_10002425;
	scaffold1106	WUBlastX	LINE_L1-Tx1	13929	14030	34	-	.	.
scaffold1106	subtractBed	intrn	42169	42207	.	+	.	Parent=CGI_10002426;
	scaffold1106	TRF	Tandem_Repeat	42169	42207	60	+	.	.
scaffold1107	subtractBed	intrn	28019	28079	.	+	.	Parent=CGI_10004768;
	scaffold1107	TRF	Tandem_Repeat	28019	28079	104	+	.	.
scaffold1107	subtractBed	intrn	28019	28082	.	+	.	Parent=CGI_10004768;
	scaffold1107	TRF	Tandem_Repeat	28019	28082	74	+	.	.
scaffold1107	subtractBed	intrn	31415	32054	.	+	.	Parent=CGI_10004768;
	scaffold1107	TRF	Tandem_Repeat	31415	32054	598	+	.	.
scaffold1107	subtractBed	intrn	42662	43069	.	+	.	Parent=CGI_10004768;
	scaffold1107	WUBlastX	LINE_L1-Tx1	42662	43069	65	-	.	.
scaffold1107	subtractBed	intrn	43030	43113	.	+	.	Parent=CGI_10004768;
	scaffold1107	WUBlastX	LINE_L1-Tx1	43030	43113	35	-	.	.
scaffold1107	subtractBed	intrn	42293	42397	.	+	.	Parent=CGI_10004768;
	scaffold1107	WUBlastX	LINE_L1	42293	42397	23	-	.	.
scaffold1107	subtractBed	intrn	42599	42946	.	+	.	Parent=CGI_10004768;
	scaffold1107	WUBlastX	LINE_L1	42599	42946	80	-	.	.
scaffold1107	subtractBed	intrn	42683	42988	.	+	.	Parent=CGI_10004768;
	scaffold1107	WUBlastX	LINE_L1	42683	42988	81	-	.	.
scaffold1108	subtractBed	intrn	18803	19450	.	+	.	Parent=CGI_10021955;
	scaffold1108	TRF	Tandem_Repeat	18803	19450	810	+	.	.
scaffold1108	subtractBed	intrn	20638	21342	.	+	.	Parent=CGI_10021955;
	scaffold1108	TRF	Tandem_Repeat	20638	21342	821	+	.	.
scaffold1108	subtractBed	intrn	28906	29184	.	-	.	Parent=CGI_10021956;
	scaffold1108	TRF	Tandem_Repeat	28906	29207	532	+	.	.
scaffold1108	subtractBed	intrn	47076	47121	.	+	.	Parent=CGI_10021957;
	scaffold1108	TRF	Tandem_Repeat	47076	47121	65	+	.	.
scaffold1108	subtractBed	intrn	144375	145050	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	144375	145071	1020	+	.	.
scaffold1108	subtractBed	intrn	145746	146296	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	145746	146296	753	+	.	.
scaffold1108	subtractBed	intrn	147073	147261	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	147073	147261	306	+	.	.
scaffold1108	subtractBed	intrn	150231	150422	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	150231	150422	330	+	.	.
scaffold1108	subtractBed	intrn	150231	150521	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	150231	150521	451	+	.	.
scaffold1108	subtractBed	intrn	150231	150521	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	150231	150521	451	+	.	.
scaffold1108	subtractBed	intrn	150425	150521	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	150425	150521	194	+	.	.
scaffold1108	subtractBed	intrn	157007	159226	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	157007	159226	797	+	.	.
scaffold1108	subtractBed	intrn	157007	159236	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	157007	159236	2340	+	.	.
scaffold1108	subtractBed	intrn	158240	158378	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	158240	158378	63	+	.	.
scaffold1108	subtractBed	intrn	157071	158337	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	157071	158337	1354	+	.	.
scaffold1108	subtractBed	intrn	158333	159236	.	+	.	Parent=CGI_10021963;
	scaffold1108	TRF	Tandem_Repeat	158333	159236	1074	+	.	.
scaffold1108	subtractBed	intrn	173090	173632	.	+	.	Parent=CGI_10021964;
	scaffold1108	TRF	Tandem_Repeat	173078	173632	957	+	.	.
scaffold1108	subtractBed	intrn	195008	195070	.	+	.	Parent=CGI_10021966;
	scaffold1108	TRF	Tandem_Repeat	195008	195070	126	+	.	.
scaffold1108	subtractBed	intrn	195165	195415	.	+	.	Parent=CGI_10021966;
	scaffold1108	TRF	Tandem_Repeat	195165	195415	330	+	.	.
scaffold1108	subtractBed	intrn	195675	195813	.	+	.	Parent=CGI_10021966;
	scaffold1108	TRF	Tandem_Repeat	195675	195813	253	+	.	.
scaffold1108	subtractBed	intrn	210354	210487	.	-	.	Parent=CGI_10021967;
	scaffold1108	TRF	Tandem_Repeat	210354	210487	175	+	.	.
scaffold1108	subtractBed	intrn	238569	238686	.	-	.	Parent=CGI_10021968;
	scaffold1108	TRF	Tandem_Repeat	238569	238686	65	+	.	.
scaffold1108	subtractBed	intrn	238543	238690	.	-	.	Parent=CGI_10021968;
	scaffold1108	TRF	Tandem_Repeat	238543	238690	260	+	.	.
scaffold1108	subtractBed	intrn	252458	252737	.	-	.	Parent=CGI_10021969;
	scaffold1108	TRF	Tandem_Repeat	252437	252737	469	+	.	.
scaffold1108	subtractBed	intrn	283596	285109	.	+	.	Parent=CGI_10021970;
	scaffold1108	TRF	Tandem_Repeat	283596	285109	2425	+	.	.
scaffold1108	subtractBed	intrn	301217	301589	.	+	.	Parent=CGI_10021972;
	scaffold1108	TRF	Tandem_Repeat	301217	301621	810	+	.	.
scaffold1108	subtractBed	intrn	305060	305214	.	+	.	Parent=CGI_10021972;
	scaffold1108	TRF	Tandem_Repeat	305034	305214	237	+	.	.
scaffold1108	subtractBed	intrn	326421	326989	.	+	.	Parent=CGI_10021973;
	scaffold1108	TRF	Tandem_Repeat	326398	326989	480	+	.	.
scaffold1108	subtractBed	intrn	329660	330582	.	+	.	Parent=CGI_10021973;
	scaffold1108	TRF	Tandem_Repeat	329660	330582	1336	+	.	.
scaffold1108	subtractBed	intrn	336684	336955	.	+	.	Parent=CGI_10021973;
	scaffold1108	TRF	Tandem_Repeat	336670	336955	331	+	.	.
scaffold1108	subtractBed	intrn	391852	391895	.	-	.	Parent=CGI_10021977;
	scaffold1108	TRF	Tandem_Repeat	391852	391895	54	+	.	.
scaffold1108	subtractBed	intrn	395162	395929	.	-	.	Parent=CGI_10021977;
	scaffold1108	TRF	Tandem_Repeat	395162	395929	1129	+	.	.
scaffold1108	subtractBed	intrn	399620	399677	.	+	.	Parent=CGI_10021978;
	scaffold1108	TRF	Tandem_Repeat	399620	399677	72	+	.	.
scaffold1108	subtractBed	intrn	407304	408036	.	+	.	Parent=CGI_10021979;
	scaffold1108	TRF	Tandem_Repeat	407300	408036	1133	+	.	.
scaffold1108	subtractBed	intrn	416799	416847	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	416799	416847	98	+	.	.
scaffold1108	subtractBed	intrn	417074	417160	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	417065	417160	106	+	.	.
scaffold1108	subtractBed	intrn	420219	420347	.	+	.	Parent=CGI_10021980;
	scaffold1108	WUBlastX	LTR_Gypsy	420219	420347	76	-	.	.
scaffold1108	subtractBed	intrn	423818	423959	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	423818	423959	221	+	.	.
scaffold1108	subtractBed	intrn	425531	425643	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	425531	425643	154	+	.	.
scaffold1108	subtractBed	intrn	428553	428586	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	428553	428586	68	+	.	.
scaffold1108	subtractBed	intrn	428977	429597	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	428968	429597	581	+	.	.
scaffold1108	subtractBed	intrn	428977	429597	.	+	.	Parent=CGI_10021980;
	scaffold1108	TRF	Tandem_Repeat	428968	429597	779	+	.	.
scaffold1108	subtractBed	intrn	462161	462192	.	-	.	Parent=CGI_10021983;
	scaffold1108	TRF	Tandem_Repeat	462161	462192	55	+	.	.
scaffold1108	subtractBed	intrn	476302	476421	.	+	.	Parent=CGI_10021984;
	scaffold1108	TRF	Tandem_Repeat	476302	476421	59	+	.	.
scaffold1108	subtractBed	intrn	476310	476444	.	+	.	Parent=CGI_10021984;
	scaffold1108	TRF	Tandem_Repeat	476310	476444	220	+	.	.
scaffold1108	subtractBed	intrn	477010	477975	.	+	.	Parent=CGI_10021984;
	scaffold1108	TRF	Tandem_Repeat	477010	477975	1605	+	.	.
scaffold1108	subtractBed	intrn	490630	490696	.	+	.	Parent=CGI_10021986;
	scaffold1108	TRF	Tandem_Repeat	490630	490696	116	+	.	.
scaffold1108	subtractBed	intrn	546819	546853	.	+	.	Parent=CGI_10021988;
	scaffold1108	TRF	Tandem_Repeat	546819	546853	52	+	.	.
scaffold1108	subtractBed	intrn	641906	642784	.	+	.	Parent=CGI_10021989;
	scaffold1108	TRF	Tandem_Repeat	641906	642784	1271	+	.	.
scaffold1108	subtractBed	intrn	643728	643874	.	+	.	Parent=CGI_10021989;
	scaffold1108	TRF	Tandem_Repeat	643728	643874	73	+	.	.
scaffold1108	subtractBed	intrn	643790	643919	.	+	.	Parent=CGI_10021989;
	scaffold1108	TRF	Tandem_Repeat	643790	643919	93	+	.	.
scaffold1108	subtractBed	intrn	653361	653408	.	+	.	Parent=CGI_10021990;
	scaffold1108	TRF	Tandem_Repeat	653361	653408	96	+	.	.
scaffold1108	subtractBed	intrn	656037	656080	.	+	.	Parent=CGI_10021990;
	scaffold1108	TRF	Tandem_Repeat	656037	656080	88	+	.	.
scaffold1108	subtractBed	intrn	656667	656711	.	+	.	Parent=CGI_10021990;
	scaffold1108	TRF	Tandem_Repeat	656667	656711	90	+	.	.
scaffold1108	subtractBed	intrn	656799	656839	.	+	.	Parent=CGI_10021990;
	scaffold1108	TRF	Tandem_Repeat	656799	656839	73	+	.	.
scaffold1112	subtractBed	intrn	114721	114747	.	-	.	Parent=CGI_10012401;
	scaffold1112	TRF	Tandem_Repeat	114721	114747	54	+	.	.
scaffold1112	subtractBed	intrn	114909	114983	.	-	.	Parent=CGI_10012401;
	scaffold1112	TRF	Tandem_Repeat	114909	114983	141	+	.	.
scaffold1112	subtractBed	intrn	132370	132415	.	-	.	Parent=CGI_10012403;
	scaffold1112	TRF	Tandem_Repeat	132370	132415	92	+	.	.
scaffold1112	subtractBed	intrn	139571	140661	.	+	.	Parent=CGI_10012404;
	scaffold1112	TRF	Tandem_Repeat	139571	140661	1648	+	.	.
scaffold1112	subtractBed	intrn	167898	167959	.	-	.	Parent=CGI_10012405;
	scaffold1112	TRF	Tandem_Repeat	167898	167959	115	+	.	.
scaffold1112	subtractBed	intrn	168080	168128	.	-	.	Parent=CGI_10012405;
	scaffold1112	TRF	Tandem_Repeat	168080	168128	89	+	.	.
scaffold1112	subtractBed	intrn	169209	169328	.	-	.	Parent=CGI_10012405;
	scaffold1112	TRF	Tandem_Repeat	169209	169328	78	+	.	.
scaffold1112	subtractBed	intrn	169151	169269	.	-	.	Parent=CGI_10012405;
	scaffold1112	TRF	Tandem_Repeat	169151	169269	75	+	.	.
scaffold1112	subtractBed	intrn	181492	181522	.	+	.	Parent=CGI_10012406;
	scaffold1112	TRF	Tandem_Repeat	181492	181522	62	+	.	.
scaffold1112	subtractBed	intrn	195333	195368	.	-	.	Parent=CGI_10012407;
	scaffold1112	TRF	Tandem_Repeat	195333	195368	72	+	.	.
scaffold1112	subtractBed	intrn	197175	197219	.	-	.	Parent=CGI_10012407;
	scaffold1112	TRF	Tandem_Repeat	197175	197219	90	+	.	.
scaffold1112	subtractBed	intrn	226580	226607	.	-	.	Parent=CGI_10012410;
	scaffold1112	TRF	Tandem_Repeat	226580	226607	56	+	.	.
scaffold1113	subtractBed	intrn	16718	16749	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	16718	16749	64	+	.	.
scaffold1113	subtractBed	intrn	16860	17622	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	16860	17622	1081	+	.	.
scaffold1113	subtractBed	intrn	18382	18767	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18382	18767	106	+	.	.
scaffold1113	subtractBed	intrn	18579	18755	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18579	18755	116	+	.	.
scaffold1113	subtractBed	intrn	18630	18703	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18630	18703	60	+	.	.
scaffold1113	subtractBed	intrn	18578	18732	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18578	18732	93	+	.	.
scaffold1113	subtractBed	intrn	18634	18702	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18634	18702	52	+	.	.
scaffold1113	subtractBed	intrn	18621	18769	.	+	.	Parent=CGI_10002450;
	scaffold1113	TRF	Tandem_Repeat	18621	18769	89	+	.	.
scaffold1113	subtractBed	intrn	26507	26536	.	-	.	Parent=CGI_10002452;
	scaffold1113	TRF	Tandem_Repeat	26507	26536	60	+	.	.
scaffold1115	subtractBed	intrn	54463	54512	.	-	.	Parent=CGI_10005241;
	scaffold1115	TRF	Tandem_Repeat	54463	54512	84	+	.	.
scaffold1115	subtractBed	intrn	110334	110849	.	+	.	Parent=CGI_10005242;
	scaffold1115	TRF	Tandem_Repeat	110334	110849	403	+	.	.
scaffold1115	subtractBed	intrn	110931	111106	.	+	.	Parent=CGI_10005242;
	scaffold1115	TRF	Tandem_Repeat	110931	111106	162	+	.	.
scaffold1116	subtractBed	intrn	1360	1388	.	-	.	Parent=CGI_10009119;
	scaffold1116	TRF	Tandem_Repeat	1360	1388	58	+	.	.
scaffold1116	subtractBed	intrn	53457	53572	.	-	.	Parent=CGI_10009121;
	scaffold1116	TRF	Tandem_Repeat	53457	53572	205	+	.	.
scaffold1116	subtractBed	intrn	57934	58003	.	-	.	Parent=CGI_10009121;
	scaffold1116	TRF	Tandem_Repeat	57934	58003	140	+	.	.
scaffold1116	subtractBed	intrn	65105	65159	.	-	.	Parent=CGI_10009123;
	scaffold1116	TRF	Tandem_Repeat	65105	65159	74	+	.	.
scaffold1116	subtractBed	intrn	67508	67545	.	-	.	Parent=CGI_10009123;
	scaffold1116	TRF	Tandem_Repeat	67508	67545	76	+	.	.
scaffold1116	subtractBed	intrn	92760	92826	.	+	.	Parent=CGI_10009126;
	scaffold1116	TRF	Tandem_Repeat	92760	92826	127	+	.	.
scaffold1116	subtractBed	intrn	94197	95143	.	+	.	Parent=CGI_10009126;
	scaffold1116	TRF	Tandem_Repeat	94197	95143	697	+	.	.
scaffold1116	subtractBed	intrn	115091	115140	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	115091	115140	73	+	.	.
scaffold1116	subtractBed	intrn	116467	116887	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	116467	116887	695	+	.	.
scaffold1116	subtractBed	intrn	117107	117323	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	117107	117323	224	+	.	.
scaffold1116	subtractBed	intrn	117117	117323	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	117117	117323	256	+	.	.
scaffold1116	subtractBed	intrn	118929	119145	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	118929	119145	224	+	.	.
scaffold1116	subtractBed	intrn	118939	119145	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	118939	119145	256	+	.	.
scaffold1116	subtractBed	intrn	120917	121624	.	+	.	Parent=CGI_10009129;
	scaffold1116	TRF	Tandem_Repeat	120906	121624	1257	+	.	.
scaffold1116	subtractBed	intrn	147942	148012	.	+	.	Parent=CGI_10009132;
	scaffold1116	TRF	Tandem_Repeat	147942	148012	142	+	.	.
scaffold1116	subtractBed	intrn	160076	160122	.	-	.	Parent=CGI_10009133;
	scaffold1116	TRF	Tandem_Repeat	160076	160122	94	+	.	.
scaffold1116	subtractBed	intrn	173804	173850	.	-	.	Parent=CGI_10009133;
	scaffold1116	TRF	Tandem_Repeat	173804	173850	94	+	.	.
scaffold1116	subtractBed	intrn	175545	175584	.	-	.	Parent=CGI_10009133;
	scaffold1116	TRF	Tandem_Repeat	175545	175584	80	+	.	.
scaffold1116	subtractBed	intrn	211109	211618	.	+	.	Parent=CGI_10009135;
	scaffold1116	TRF	Tandem_Repeat	211109	211618	732	+	.	.
scaffold1116	subtractBed	intrn	212139	212202	.	+	.	Parent=CGI_10009135;
	scaffold1116	TRF	Tandem_Repeat	212139	212202	110	+	.	.
scaffold1116	subtractBed	intrn	212734	213790	.	+	.	Parent=CGI_10009135;
	scaffold1116	TRF	Tandem_Repeat	212734	213790	971	+	.	.
scaffold1117	subtractBed	intrn	11980	12648	.	+	.	Parent=CGI_10002970;
	scaffold1117	WUBlastX	LINE_L1-Tx1	11980	12648	76	-	.	.
scaffold1117	subtractBed	intrn	51620	51666	.	+	.	Parent=CGI_10002973;
	scaffold1117	TRF	Tandem_Repeat	51620	51666	94	+	.	.
scaffold1119	subtractBed	intrn	20078	20120	.	+	.	Parent=CGI_10009597;
	scaffold1119	TRF	Tandem_Repeat	20078	20120	77	+	.	.
scaffold1119	subtractBed	intrn	140738	140806	.	+	.	Parent=CGI_10009604;
	scaffold1119	WUBlastX	LINE_L2	140738	140806	21	-	.	.
scaffold1119	subtractBed	intrn	141568	142482	.	+	.	Parent=CGI_10009604;
	scaffold1119	WUBlastX	LINE_CR1	141568	142482	746	-	.	.
scaffold1119	subtractBed	intrn	141574	142674	.	+	.	Parent=CGI_10009604;
	scaffold1119	WUBlastX	LINE_CR1	141574	142674	686	-	.	.
scaffold1119	subtractBed	intrn	141706	142875	.	+	.	Parent=CGI_10009604;
	scaffold1119	WUBlastX	LINE_CR1	141706	142875	225	-	.	.
scaffold1119	subtractBed	intrn	141568	142482	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	LINE_CR1	141568	142482	746	-	.	.
scaffold1119	subtractBed	intrn	141574	142674	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	LINE_CR1	141574	142674	686	-	.	.
scaffold1119	subtractBed	intrn	141706	142875	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	LINE_CR1	141706	142875	225	-	.	.
scaffold1119	subtractBed	intrn	149526	149574	.	-	.	Parent=CGI_10009605;
	scaffold1119	TRF	Tandem_Repeat	149526	149574	98	+	.	.
scaffold1119	subtractBed	intrn	159633	160002	.	-	.	Parent=CGI_10009605;
	scaffold1119	TRF	Tandem_Repeat	159633	160002	634	+	.	.
scaffold1119	subtractBed	intrn	162470	163117	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	DNA_TcMar-Tc2	162470	163117	194	-	.	.
scaffold1119	subtractBed	intrn	163182	163340	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	DNA_TcMar-Tc2	163182	163340	24	-	.	.
scaffold1119	subtractBed	intrn	162302	163141	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	DNA_TcMar-Tc2	162302	163141	141	-	.	.
scaffold1119	subtractBed	intrn	170581	171435	.	-	.	Parent=CGI_10009605;
	scaffold1119	WUBlastX	LTR_Gypsy	170581	171435	442	-	.	.
scaffold1119	subtractBed	intrn	149526	149574	.	+	.	Parent=CGI_10009606;
	scaffold1119	TRF	Tandem_Repeat	149526	149574	98	+	.	.
scaffold1119	subtractBed	intrn	199169	199222	.	+	.	Parent=CGI_10009609;
	scaffold1119	TRF	Tandem_Repeat	199169	199222	101	+	.	.
scaffold1121	subtractBed	intrn	35365	35413	.	-	.	Parent=CGI_10006498;
	scaffold1121	TRF	Tandem_Repeat	35365	35413	98	+	.	.
scaffold1121	subtractBed	intrn	47616	47645	.	-	.	Parent=CGI_10006498;
	scaffold1121	TRF	Tandem_Repeat	47616	47645	60	+	.	.
scaffold1121	subtractBed	intrn	51497	51567	.	-	.	Parent=CGI_10006498;
	scaffold1121	TRF	Tandem_Repeat	51497	51567	142	+	.	.
scaffold1121	subtractBed	intrn	55099	55125	.	-	.	Parent=CGI_10006498;
	scaffold1121	TRF	Tandem_Repeat	55099	55125	54	+	.	.
scaffold1121	subtractBed	intrn	88738	89065	.	+	.	Parent=CGI_10006501;
	scaffold1121	TRF	Tandem_Repeat	88738	89065	500	+	.	.
scaffold1121	subtractBed	intrn	97692	97737	.	-	.	Parent=CGI_10006502;
	scaffold1121	TRF	Tandem_Repeat	97692	97737	92	+	.	.
scaffold1121	subtractBed	intrn	110547	110636	.	+	.	Parent=CGI_10006504;
	scaffold1121	TRF	Tandem_Repeat	110547	110636	153	+	.	.
scaffold1121	subtractBed	intrn	110547	110636	.	+	.	Parent=CGI_10006504;
	scaffold1121	TRF	Tandem_Repeat	110547	110636	153	+	.	.
scaffold1121	subtractBed	intrn	132669	132817	.	+	.	Parent=CGI_10006506;
	scaffold1121	TRF	Tandem_Repeat	132669	132817	201	+	.	.
scaffold1121	subtractBed	intrn	140644	140964	.	-	.	Parent=CGI_10006507;
	scaffold1121	WUBlastX	DNA_hAT-Tip100	140644	140964	46	-	.	.
scaffold1121	subtractBed	intrn	140767	140970	.	-	.	Parent=CGI_10006507;
	scaffold1121	WUBlastX	DNA_hAT-Tip100	140767	140970	98	-	.	.
scaffold1121	subtractBed	intrn	140752	140997	.	-	.	Parent=CGI_10006507;
	scaffold1121	WUBlastX	DNA_hAT-Tip100	140752	140997	94	-	.	.
scaffold1121	subtractBed	intrn	144251	144638	.	-	.	Parent=CGI_10006507;
	scaffold1121	TRF	Tandem_Repeat	144251	144638	425	+	.	.
scaffold1123	subtractBed	intrn	7062	7091	.	+	.	Parent=CGI_10018729;
	scaffold1123	TRF	Tandem_Repeat	7062	7091	51	+	.	.
scaffold1123	subtractBed	intrn	13815	14171	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	13815	14171	141	+	.	.
scaffold1123	subtractBed	intrn	14388	14735	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	14388	14735	391	+	.	.
scaffold1123	subtractBed	intrn	14704	15384	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	14704	15384	494	+	.	.
scaffold1123	subtractBed	intrn	14301	14729	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	14301	14729	153	+	.	.
scaffold1123	subtractBed	intrn	13920	14234	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	13920	14234	226	+	.	.
scaffold1123	subtractBed	intrn	14905	15474	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	14905	15474	54	+	.	.
scaffold1123	subtractBed	intrn	13959	14333	.	+	.	Parent=CGI_10018729;
	scaffold1123	WUBlastX	LINE_RTE-BovB	13959	14333	134	+	.	.
scaffold1123	subtractBed	intrn	256097	256141	.	+	.	Parent=CGI_10018735;
	scaffold1123	TRF	Tandem_Repeat	256097	256141	90	+	.	.
scaffold1123	subtractBed	intrn	256699	256740	.	+	.	Parent=CGI_10018735;
	scaffold1123	TRF	Tandem_Repeat	256699	256740	84	+	.	.
scaffold1123	subtractBed	intrn	335225	335359	.	-	.	Parent=CGI_10018737;
	scaffold1123	WUBlastX	DNA_IS4EU	335225	335719	26	-	.	.
scaffold1123	subtractBed	intrn	335354	335359	.	-	.	Parent=CGI_10018737;
	scaffold1123	WUBlastX	DNA_Kolobok-IS4	335354	335704	68	-	.	.
scaffold1123	subtractBed	intrn	413311	413628	.	+	.	Parent=CGI_10018742;
	scaffold1123	TRF	Tandem_Repeat	413311	413628	223	+	.	.
scaffold1123	subtractBed	intrn	413623	414248	.	+	.	Parent=CGI_10018742;
	scaffold1123	TRF	Tandem_Repeat	413623	414248	587	+	.	.
scaffold1123	subtractBed	intrn	427699	427751	.	+	.	Parent=CGI_10018742;
	scaffold1123	TRF	Tandem_Repeat	427699	427751	106	+	.	.
scaffold1123	subtractBed	intrn	445896	445971	.	+	.	Parent=CGI_10018743;
	scaffold1123	TRF	Tandem_Repeat	445896	445971	73	+	.	.
scaffold1123	subtractBed	intrn	554046	554079	.	-	.	Parent=CGI_10018746;
	scaffold1123	TRF	Tandem_Repeat	554046	554079	68	+	.	.
scaffold1123	subtractBed	intrn	562872	563841	.	-	.	Parent=CGI_10018747;
	scaffold1123	TRF	Tandem_Repeat	562872	563841	654	+	.	.
scaffold1123	subtractBed	intrn	562979	563797	.	-	.	Parent=CGI_10018747;
	scaffold1123	TRF	Tandem_Repeat	562979	563797	527	+	.	.
scaffold1124	subtractBed	intrn	49797	49842	.	-	.	Parent=CGI_10003491;
	scaffold1124	TRF	Tandem_Repeat	49797	49842	92	+	.	.
scaffold1125	subtractBed	intrn	11570	12380	.	-	.	Parent=CGI_10012322;
	scaffold1125	TRF	Tandem_Repeat	11570	12380	920	+	.	.
scaffold1125	subtractBed	intrn	13160	13197	.	-	.	Parent=CGI_10012322;
	scaffold1125	TRF	Tandem_Repeat	13160	13197	51	+	.	.
scaffold1125	subtractBed	intrn	11570	12380	.	+	.	Parent=CGI_10012323;
	scaffold1125	TRF	Tandem_Repeat	11570	12380	920	+	.	.
scaffold1125	subtractBed	intrn	13160	13197	.	+	.	Parent=CGI_10012323;
	scaffold1125	TRF	Tandem_Repeat	13160	13197	51	+	.	.
scaffold1125	subtractBed	intrn	112400	112622	.	+	.	Parent=CGI_10012329;
	scaffold1125	TRF	Tandem_Repeat	112400	112622	195	+	.	.
scaffold1125	subtractBed	intrn	137277	137312	.	+	.	Parent=CGI_10012331;
	scaffold1125	TRF	Tandem_Repeat	137277	137312	72	+	.	.
scaffold1125	subtractBed	intrn	161518	161559	.	-	.	Parent=CGI_10012335;
	scaffold1125	TRF	Tandem_Repeat	161518	161559	84	+	.	.
scaffold1125	subtractBed	intrn	194556	194586	.	-	.	Parent=CGI_10012338;
	scaffold1125	TRF	Tandem_Repeat	194556	194586	53	+	.	.
scaffold1125	subtractBed	intrn	195933	195934	.	-	.	Parent=CGI_10012338;
	scaffold1125	WUBlastX	DNA_hAT	195933	196046	68	-	.	.
scaffold1125	subtractBed	intrn	196307	196310	.	-	.	Parent=CGI_10012338;
	scaffold1125	WUBlastX	DNA_hAT	196307	196507	107	-	.	.
scaffold1125	subtractBed	intrn	196036	196046	.	-	.	Parent=CGI_10012338;
	scaffold1125	WUBlastX	DNA_hAT	195933	196046	68	-	.	.
scaffold1125	subtractBed	intrn	202284	202320	.	-	.	Parent=CGI_10012338;
	scaffold1125	TRF	Tandem_Repeat	202284	202320	74	+	.	.
scaffold1125	subtractBed	intrn	223467	223858	.	-	.	Parent=CGI_10012338;
	scaffold1125	TRF	Tandem_Repeat	223467	223858	658	+	.	.
scaffold1125	subtractBed	intrn	202284	202320	.	+	.	Parent=CGI_10012339;
	scaffold1125	TRF	Tandem_Repeat	202284	202320	74	+	.	.
scaffold1125	subtractBed	intrn	235462	235759	.	-	.	Parent=CGI_10012341;
	scaffold1125	TRF	Tandem_Repeat	235462	235759	436	+	.	.
scaffold1125	subtractBed	intrn	235462	235759	.	-	.	Parent=CGI_10012341;
	scaffold1125	TRF	Tandem_Repeat	235462	235759	481	+	.	.
scaffold1125	subtractBed	intrn	237072	237301	.	-	.	Parent=CGI_10012341;
	scaffold1125	TRF	Tandem_Repeat	237072	237301	325	+	.	.
scaffold1125	subtractBed	intrn	237043	237305	.	-	.	Parent=CGI_10012341;
	scaffold1125	TRF	Tandem_Repeat	237043	237305	354	+	.	.
scaffold1125	subtractBed	intrn	237043	237305	.	-	.	Parent=CGI_10012341;
	scaffold1125	TRF	Tandem_Repeat	237043	237305	275	+	.	.
scaffold1125	subtractBed	intrn	264422	264486	.	+	.	Parent=CGI_10012342;
	scaffold1125	TRF	Tandem_Repeat	264422	264486	130	+	.	.
scaffold1125	subtractBed	intrn	274163	274885	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_L1-Tx1	274163	274885	133	-	.	.
scaffold1125	subtractBed	intrn	274945	276555	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_L1-Tx1	274945	276555	169	-	.	.
scaffold1125	subtractBed	intrn	275719	276426	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_L1-Tx1	275719	276426	213	-	.	.
scaffold1125	subtractBed	intrn	296665	297336	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_Penelope	296665	297336	21	-	.	.
scaffold1125	subtractBed	intrn	296521	297084	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_Penelope	296521	297084	89	-	.	.
scaffold1125	subtractBed	intrn	296698	297153	.	+	.	Parent=CGI_10012342;
	scaffold1125	WUBlastX	LINE_Penelope	296698	297153	30	-	.	.
scaffold1125	subtractBed	intrn	321647	321678	.	-	.	Parent=CGI_10012343;
	scaffold1125	TRF	Tandem_Repeat	321647	321678	50	+	.	.
scaffold1127	subtractBed	intrn	1489	1707	.	-	.	Parent=CGI_10010645;
	scaffold1127	TRF	Tandem_Repeat	1489	1707	213	+	.	.
scaffold1127	subtractBed	intrn	5987	6322	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1	5987	6322	73	-	.	.
scaffold1127	subtractBed	intrn	6005	6250	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	6005	6250	111	-	.	.
scaffold1127	subtractBed	intrn	9342	9393	.	-	.	Parent=CGI_10010645;
	scaffold1127	TRF	Tandem_Repeat	9342	9393	95	+	.	.
scaffold1127	subtractBed	intrn	12582	12635	.	-	.	Parent=CGI_10010645;
	scaffold1127	TRF	Tandem_Repeat	12582	12635	78	+	.	.
scaffold1127	subtractBed	intrn	14852	14899	.	-	.	Parent=CGI_10010645;
	scaffold1127	TRF	Tandem_Repeat	14852	14899	96	+	.	.
scaffold1127	subtractBed	intrn	18105	18785	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	18105	18785	323	-	.	.
scaffold1127	subtractBed	intrn	18788	19771	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	18788	19771	639	-	.	.
scaffold1127	subtractBed	intrn	19807	20025	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	19807	20025	78	-	.	.
scaffold1127	subtractBed	intrn	19819	20079	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	19819	20079	53	-	.	.
scaffold1127	subtractBed	intrn	20076	20132	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1	20076	20132	24	-	.	.
scaffold1127	subtractBed	intrn	19774	19947	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	19774	19947	44	-	.	.
scaffold1127	subtractBed	intrn	16890	17261	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	16890	17261	88	-	.	.
scaffold1127	subtractBed	intrn	17258	17716	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1-Tx1	17258	17716	57	-	.	.
scaffold1127	subtractBed	intrn	17710	18129	.	-	.	Parent=CGI_10010645;
	scaffold1127	WUBlastX	LINE_L1	17710	18129	42	-	.	.
scaffold1127	subtractBed	intrn	58319	58403	.	+	.	Parent=CGI_10010649;
	scaffold1127	TRF	Tandem_Repeat	58319	58403	62	+	.	.
scaffold1127	subtractBed	intrn	71728	71982	.	+	.	Parent=CGI_10010649;
	scaffold1127	TRF	Tandem_Repeat	71716	71982	444	+	.	.
scaffold1127	subtractBed	intrn	99763	99797	.	+	.	Parent=CGI_10010649;
	scaffold1127	TRF	Tandem_Repeat	99763	99797	61	+	.	.
scaffold1127	subtractBed	intrn	139254	139287	.	-	.	Parent=CGI_10010652;
	scaffold1127	TRF	Tandem_Repeat	139254	139287	68	+	.	.
scaffold1127	subtractBed	intrn	139342	139517	.	-	.	Parent=CGI_10010652;
	scaffold1127	TRF	Tandem_Repeat	139342	139517	187	+	.	.
scaffold1127	subtractBed	intrn	139267	139517	.	-	.	Parent=CGI_10010652;
	scaffold1127	TRF	Tandem_Repeat	139267	139517	179	+	.	.
scaffold1127	subtractBed	intrn	153757	153829	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	153757	153829	78	+	.	.
scaffold1127	subtractBed	intrn	153759	153829	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	153759	153829	60	+	.	.
scaffold1127	subtractBed	intrn	153732	153809	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	153732	153809	50	+	.	.
scaffold1127	subtractBed	intrn	153762	153820	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	153762	153820	63	+	.	.
scaffold1127	subtractBed	intrn	157708	157768	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	157708	157768	122	+	.	.
scaffold1127	subtractBed	intrn	159659	159714	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	159659	159714	112	+	.	.
scaffold1127	subtractBed	intrn	164485	164541	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	164485	164541	114	+	.	.
scaffold1127	subtractBed	intrn	166000	166147	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	166000	166147	67	+	.	.
scaffold1127	subtractBed	intrn	166005	166167	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	166005	166167	120	+	.	.
scaffold1127	subtractBed	intrn	166082	166139	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	166082	166139	50	+	.	.
scaffold1127	subtractBed	intrn	166007	166147	.	-	.	Parent=CGI_10010653;
	scaffold1127	TRF	Tandem_Repeat	166007	166147	91	+	.	.
scaffold1127	subtractBed	intrn	170262	170303	.	-	.	Parent=CGI_10010654;
	scaffold1127	TRF	Tandem_Repeat	170262	170303	84	+	.	.
scaffold1127	subtractBed	intrn	225387	225424	.	-	.	Parent=CGI_10010655;
	scaffold1127	TRF	Tandem_Repeat	225387	225424	76	+	.	.
scaffold1127	subtractBed	intrn	227502	227530	.	-	.	Parent=CGI_10010655;
	scaffold1127	TRF	Tandem_Repeat	227502	227530	58	+	.	.
scaffold1127	subtractBed	intrn	228150	228272	.	-	.	Parent=CGI_10010655;
	scaffold1127	TRF	Tandem_Repeat	228150	228272	237	+	.	.
scaffold1127	subtractBed	intrn	228154	228266	.	-	.	Parent=CGI_10010655;
	scaffold1127	TRF	Tandem_Repeat	228154	228266	100	+	.	.
scaffold1127	subtractBed	intrn	235422	235466	.	+	.	Parent=CGI_10010656;
	scaffold1127	TRF	Tandem_Repeat	235422	235466	54	+	.	.
scaffold1127	subtractBed	intrn	245839	245892	.	+	.	Parent=CGI_10010656;
	scaffold1127	WUBlastX	LTR_Copia	245839	245892	24	+	.	.
scaffold1127	subtractBed	intrn	262284	262315	.	-	.	Parent=CGI_10010657;
	scaffold1127	WUBlastX	LTR_Pao	262284	262478	48	-	.	.
scaffold1127	subtractBed	intrn	262465	262478	.	-	.	Parent=CGI_10010657;
	scaffold1127	WUBlastX	LTR_Pao	262284	262478	48	-	.	.
scaffold1128	subtractBed	intrn	10283	10349	.	+	.	Parent=CGI_10003475;
	scaffold1128	TRF	Tandem_Repeat	10283	10349	134	+	.	.
scaffold113	subtractBed	intrn	54251	54302	.	+	.	Parent=CGI_10021283;
	scaffold113	TRF	Tandem_Repeat	54251	54302	56	+	.	.
scaffold113	subtractBed	intrn	54355	54564	.	+	.	Parent=CGI_10021283;
	scaffold113	WUBlastX	LINE_RTE-X	54355	54564	50	+	.	.
scaffold113	subtractBed	intrn	54343	54660	.	+	.	Parent=CGI_10021283;
	scaffold113	WUBlastX	LINE_RTE-X	54343	54660	41	+	.	.
scaffold113	subtractBed	intrn	54358	54531	.	+	.	Parent=CGI_10021283;
	scaffold113	WUBlastX	LINE_RTE-X	54358	54531	68	+	.	.
scaffold113	subtractBed	intrn	54662	54838	.	+	.	Parent=CGI_10021283;
	scaffold113	WUBlastX	LINE_RTE-X	54662	54838	82	+	.	.
scaffold113	subtractBed	intrn	115214	115672	.	+	.	Parent=CGI_10021286;
	scaffold113	WUBlastX	LINE_RTE-X	115214	115672	66	+	.	.
scaffold113	subtractBed	intrn	172993	173358	.	+	.	Parent=CGI_10021288;
	scaffold113	WUBlastX	LINE_RTE-X	172993	173358	35	-	.	.
scaffold113	subtractBed	intrn	173083	173190	.	+	.	Parent=CGI_10021288;
	scaffold113	WUBlastX	LINE_RTE-X	173083	173190	51	-	.	.
scaffold113	subtractBed	intrn	174483	174616	.	+	.	Parent=CGI_10021288;
	scaffold113	TRF	Tandem_Repeat	174459	174616	183	+	.	.
scaffold113	subtractBed	intrn	174483	174616	.	+	.	Parent=CGI_10021288;
	scaffold113	TRF	Tandem_Repeat	174459	174616	171	+	.	.
scaffold113	subtractBed	intrn	247258	247302	.	-	.	Parent=CGI_10021289;
	scaffold113	TRF	Tandem_Repeat	247258	247302	90	+	.	.
scaffold113	subtractBed	intrn	250230	250334	.	-	.	Parent=CGI_10021289;
	scaffold113	TRF	Tandem_Repeat	250230	250334	93	+	.	.
scaffold113	subtractBed	intrn	250533	250642	.	-	.	Parent=CGI_10021289;
	scaffold113	TRF	Tandem_Repeat	250533	250642	78	+	.	.
scaffold113	subtractBed	intrn	250534	250642	.	-	.	Parent=CGI_10021289;
	scaffold113	TRF	Tandem_Repeat	250534	250642	107	+	.	.
scaffold113	subtractBed	intrn	251490	251549	.	-	.	Parent=CGI_10021289;
	scaffold113	TRF	Tandem_Repeat	251490	251549	120	+	.	.
scaffold113	subtractBed	intrn	252586	253209	.	-	.	Parent=CGI_10021289;
	scaffold113	WUBlastX	LINE_L1-Tx1	252586	253209	132	-	.	.
scaffold113	subtractBed	intrn	253217	253645	.	-	.	Parent=CGI_10021289;
	scaffold113	WUBlastX	LINE_L1-Tx1	253217	253645	48	-	.	.
scaffold113	subtractBed	intrn	281905	282003	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	281905	282003	51	+	.	.
scaffold113	subtractBed	intrn	281926	282008	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	281926	282008	89	+	.	.
scaffold113	subtractBed	intrn	283248	283294	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	283248	283294	94	+	.	.
scaffold113	subtractBed	intrn	285803	285908	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	285803	285908	83	+	.	.
scaffold113	subtractBed	intrn	285827	285908	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	285827	285908	65	+	.	.
scaffold113	subtractBed	intrn	285803	285936	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	285803	285936	72	+	.	.
scaffold113	subtractBed	intrn	287078	287183	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	287078	287183	83	+	.	.
scaffold113	subtractBed	intrn	287102	287183	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	287102	287183	65	+	.	.
scaffold113	subtractBed	intrn	287078	287211	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	287078	287211	72	+	.	.
scaffold113	subtractBed	intrn	306458	306514	.	+	.	Parent=CGI_10021291;
	scaffold113	TRF	Tandem_Repeat	306458	306514	96	+	.	.
scaffold113	subtractBed	intrn	322287	322366	.	-	.	Parent=CGI_10021292;
	scaffold113	TRF	Tandem_Repeat	322287	322366	142	+	.	.
scaffold113	subtractBed	intrn	339723	339827	.	-	.	Parent=CGI_10021292;
	scaffold113	TRF	Tandem_Repeat	339723	339827	110	+	.	.
scaffold113	subtractBed	intrn	339727	339826	.	-	.	Parent=CGI_10021292;
	scaffold113	TRF	Tandem_Repeat	339727	339826	119	+	.	.
scaffold113	subtractBed	intrn	342653	342714	.	-	.	Parent=CGI_10021292;
	scaffold113	TRF	Tandem_Repeat	342653	342714	124	+	.	.
scaffold113	subtractBed	intrn	582302	582379	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	582164	582379	30	-	.	.
scaffold113	subtractBed	intrn	582302	582379	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	582119	582379	29	-	.	.
scaffold113	subtractBed	intrn	588527	588730	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	588527	588730	53	-	.	.
scaffold113	subtractBed	intrn	589474	589635	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	589474	589635	24	-	.	.
scaffold113	subtractBed	intrn	588750	588962	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	588750	588962	99	-	.	.
scaffold113	subtractBed	intrn	589504	589641	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	589504	589641	56	-	.	.
scaffold113	subtractBed	intrn	590020	590022	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	590020	590142	20	-	.	.
scaffold113	subtractBed	intrn	589623	590009	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	589623	590009	104	-	.	.
scaffold113	subtractBed	intrn	589683	590009	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	589683	590009	136	-	.	.
scaffold113	subtractBed	intrn	590403	590600	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_hAT-Ac	590403	590738	72	-	.	.
scaffold113	subtractBed	intrn	590382	590600	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_hAT-Tag1	590382	590951	70	-	.	.
scaffold113	subtractBed	intrn	590078	590142	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_MuDR	590020	590142	20	-	.	.
scaffold113	subtractBed	intrn	590418	590600	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_hAT-Ac	590418	590606	73	-	.	.
scaffold113	subtractBed	intrn	590418	590549	.	-	.	Parent=CGI_10021294;
	scaffold113	WUBlastX	DNA_hAT-Hobo	590418	590549	75	-	.	.
scaffold113	subtractBed	intrn	599545	599637	.	-	.	Parent=CGI_10021295;
	scaffold113	TRF	Tandem_Repeat	599545	599637	170	+	.	.
scaffold113	subtractBed	intrn	599532	599636	.	-	.	Parent=CGI_10021295;
	scaffold113	TRF	Tandem_Repeat	599532	599636	131	+	.	.
scaffold113	subtractBed	intrn	600188	600245	.	-	.	Parent=CGI_10021295;
	scaffold113	TRF	Tandem_Repeat	600188	600245	109	+	.	.
scaffold113	subtractBed	intrn	608833	608864	.	+	.	Parent=CGI_10021296;
	scaffold113	TRF	Tandem_Repeat	608833	608864	55	+	.	.
scaffold113	subtractBed	intrn	616232	616393	.	-	.	Parent=CGI_10021297;
	scaffold113	WUBlastX	LINE_L2-Hydra	616232	616393	23	-	.	.
scaffold113	subtractBed	intrn	612491	616147	.	-	.	Parent=CGI_10021297;
	scaffold113	WUBlastX	LINE_L1-Tx1	612491	616147	1090	-	.	.
scaffold113	subtractBed	intrn	616962	617630	.	-	.	Parent=CGI_10021297;
	scaffold113	WUBlastX	LINE_CR1	616962	617630	248	-	.	.
scaffold113	subtractBed	intrn	629940	629975	.	-	.	Parent=CGI_10021299;
	scaffold113	TRF	Tandem_Repeat	629940	629975	72	+	.	.
scaffold113	subtractBed	intrn	653033	653093	.	+	.	Parent=CGI_10021300;
	scaffold113	TRF	Tandem_Repeat	653033	653093	122	+	.	.
scaffold1131	subtractBed	intrn	41565	41622	.	+	.	Parent=CGI_10013495;
	scaffold1131	TRF	Tandem_Repeat	41565	41622	116	+	.	.
scaffold1131	subtractBed	intrn	60147	60179	.	+	.	Parent=CGI_10013498;
	scaffold1131	TRF	Tandem_Repeat	60147	60179	57	+	.	.
scaffold1131	subtractBed	intrn	65664	65718	.	-	.	Parent=CGI_10013499;
	scaffold1131	TRF	Tandem_Repeat	65664	65718	74	+	.	.
scaffold1131	subtractBed	intrn	187685	187762	.	-	.	Parent=CGI_10013503;
	scaffold1131	TRF	Tandem_Repeat	187685	187762	156	+	.	.
scaffold1131	subtractBed	intrn	206344	206522	.	-	.	Parent=CGI_10013504;
	scaffold1131	TRF	Tandem_Repeat	206344	206522	225	+	.	.
scaffold1131	subtractBed	intrn	248210	248434	.	-	.	Parent=CGI_10013505;
	scaffold1131	WUBlastX	LINE_R2	248210	248434	89	-	.	.
scaffold1131	subtractBed	intrn	304143	304144	.	+	.	Parent=CGI_10013506;
	scaffold1131	WUBlastX	DNA_Kolobok	304143	304292	81	+	.	.
scaffold1131	subtractBed	intrn	325975	326026	.	+	.	Parent=CGI_10013507;
	scaffold1131	TRF	Tandem_Repeat	325975	326026	86	+	.	.
scaffold1132	subtractBed	intrn	51997	52034	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	51997	52034	60	+	.	.
scaffold1132	subtractBed	intrn	59101	59141	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	59101	59141	82	+	.	.
scaffold1132	subtractBed	intrn	61958	62000	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	61958	62000	86	+	.	.
scaffold1132	subtractBed	intrn	63943	63987	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	63943	63987	90	+	.	.
scaffold1132	subtractBed	intrn	66816	67064	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66816	67064	172	+	.	.
scaffold1132	subtractBed	intrn	66816	67064	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66816	67064	172	+	.	.
scaffold1132	subtractBed	intrn	66816	67064	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66816	67064	172	+	.	.
scaffold1132	subtractBed	intrn	66816	67107	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66816	67107	172	+	.	.
scaffold1132	subtractBed	intrn	66816	67107	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66816	67107	159	+	.	.
scaffold1132	subtractBed	intrn	66976	67074	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	66976	67074	70	+	.	.
scaffold1132	subtractBed	intrn	67572	67616	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	67572	67616	90	+	.	.
scaffold1132	subtractBed	intrn	67986	68279	.	-	.	Parent=CGI_10023311;
	scaffold1132	WUBlastX	LINE_RTE-X	67986	68279	50	-	.	.
scaffold1132	subtractBed	intrn	67941	68195	.	-	.	Parent=CGI_10023311;
	scaffold1132	WUBlastX	LINE_RTE-X	67941	68195	28	-	.	.
scaffold1132	subtractBed	intrn	67917	68372	.	-	.	Parent=CGI_10023311;
	scaffold1132	WUBlastX	LINE_RTE-X	67917	68372	21	-	.	.
scaffold1132	subtractBed	intrn	80930	80956	.	-	.	Parent=CGI_10023311;
	scaffold1132	TRF	Tandem_Repeat	80930	80956	54	+	.	.
scaffold1132	subtractBed	intrn	79529	80005	.	-	.	Parent=CGI_10023311;
	scaffold1132	WUBlastX	LINE_L1-Tx1	79529	80005	205	+	.	.
scaffold1132	subtractBed	intrn	79394	79897	.	-	.	Parent=CGI_10023311;
	scaffold1132	WUBlastX	LINE_L1	79394	79897	143	+	.	.
scaffold1132	subtractBed	intrn	120781	120842	.	-	.	Parent=CGI_10023313;
	scaffold1132	TRF	Tandem_Repeat	120781	120842	61	+	.	.
scaffold1132	subtractBed	intrn	120781	120847	.	-	.	Parent=CGI_10023313;
	scaffold1132	TRF	Tandem_Repeat	120781	120847	66	+	.	.
scaffold1132	subtractBed	intrn	120798	120847	.	-	.	Parent=CGI_10023313;
	scaffold1132	TRF	Tandem_Repeat	120798	120847	82	+	.	.
scaffold1132	subtractBed	intrn	125523	125566	.	-	.	Parent=CGI_10023313;
	scaffold1132	TRF	Tandem_Repeat	125523	125566	88	+	.	.
scaffold1132	subtractBed	intrn	208489	208536	.	-	.	Parent=CGI_10023314;
	scaffold1132	TRF	Tandem_Repeat	208489	208536	96	+	.	.
scaffold1132	subtractBed	intrn	210084	210320	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210084	210320	25	+	.	.
scaffold1132	subtractBed	intrn	210138	210326	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210138	210326	27	+	.	.
scaffold1132	subtractBed	intrn	210455	210826	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210455	210826	92	+	.	.
scaffold1132	subtractBed	intrn	210524	210898	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210524	210898	78	+	.	.
scaffold1132	subtractBed	intrn	210572	210829	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210572	210829	99	+	.	.
scaffold1132	subtractBed	intrn	210320	210826	.	-	.	Parent=CGI_10023314;
	scaffold1132	WUBlastX	DNA_TcMar-Tc1	210320	210826	74	+	.	.
scaffold1132	subtractBed	intrn	220229	220276	.	-	.	Parent=CGI_10023314;
	scaffold1132	TRF	Tandem_Repeat	220229	220276	87	+	.	.
scaffold1132	subtractBed	intrn	326313	326629	.	-	.	Parent=CGI_10023315;
	scaffold1132	TRF	Tandem_Repeat	326313	326629	273	+	.	.
scaffold1132	subtractBed	intrn	334511	336553	.	-	.	Parent=CGI_10023315;
	scaffold1132	WUBlastX	LINE_RTE-X	334511	336553	850	+	.	.
scaffold1132	subtractBed	intrn	333766	333813	.	-	.	Parent=CGI_10023315;
	scaffold1132	WUBlastX	LINE_CR1	333766	333813	20	+	.	.
scaffold1132	subtractBed	intrn	411020	411250	.	+	.	Parent=CGI_10023317;
	scaffold1132	TRF	Tandem_Repeat	411020	411250	57	+	.	.
scaffold1132	subtractBed	intrn	411007	411245	.	+	.	Parent=CGI_10023317;
	scaffold1132	TRF	Tandem_Repeat	411007	411245	412	+	.	.
scaffold1132	subtractBed	intrn	416336	416386	.	-	.	Parent=CGI_10023318;
	scaffold1132	TRF	Tandem_Repeat	416336	416386	102	+	.	.
scaffold1132	subtractBed	intrn	424662	424796	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	424662	424796	63	+	.	.
scaffold1132	subtractBed	intrn	421289	421456	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_L2	421289	421456	83	+	.	.
scaffold1132	subtractBed	intrn	422007	423194	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	422007	423194	134	+	.	.
scaffold1132	subtractBed	intrn	423805	423987	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_L1-Tx1	423805	423987	27	+	.	.
scaffold1132	subtractBed	intrn	421649	421987	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	421649	421987	61	+	.	.
scaffold1132	subtractBed	intrn	423175	423465	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	423175	423465	194	+	.	.
scaffold1132	subtractBed	intrn	421706	422011	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	421706	422011	90	+	.	.
scaffold1132	subtractBed	intrn	423205	423516	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_CR1	423205	423516	136	+	.	.
scaffold1132	subtractBed	intrn	424793	424888	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	424793	424888	60	+	.	.
scaffold1132	subtractBed	intrn	424141	424203	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_R1	424141	424203	26	+	.	.
scaffold1132	subtractBed	intrn	424518	424811	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_I	424518	424811	23	+	.	.
scaffold1132	subtractBed	intrn	421271	421528	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_L1-Tx1	421271	421528	82	+	.	.
scaffold1132	subtractBed	intrn	424299	424394	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_R2	424299	424394	25	+	.	.
scaffold1132	subtractBed	intrn	424897	426141	.	-	.	Parent=CGI_10023318;
	scaffold1132	WUBlastX	LINE_RTE-X	424897	426141	601	+	.	.
scaffold1132	subtractBed	intrn	472792	473059	.	+	.	Parent=CGI_10023321;
	scaffold1132	TRF	Tandem_Repeat	472772	473059	558	+	.	.
scaffold1132	subtractBed	intrn	486503	486577	.	-	.	Parent=CGI_10023322;
	scaffold1132	TRF	Tandem_Repeat	486503	486577	150	+	.	.
scaffold1132	subtractBed	intrn	491903	492123	.	-	.	Parent=CGI_10023322;
	scaffold1132	TRF	Tandem_Repeat	491903	492123	370	+	.	.
scaffold1132	subtractBed	intrn	494227	494327	.	-	.	Parent=CGI_10023322;
	scaffold1132	TRF	Tandem_Repeat	494227	494327	73	+	.	.
scaffold1132	subtractBed	intrn	498501	498848	.	-	.	Parent=CGI_10023322;
	scaffold1132	TRF	Tandem_Repeat	498501	498848	561	+	.	.
scaffold1132	subtractBed	intrn	535116	535146	.	-	.	Parent=CGI_10023323;
	scaffold1132	TRF	Tandem_Repeat	535116	535146	62	+	.	.
scaffold1132	subtractBed	intrn	553362	553628	.	+	.	Parent=CGI_10023324;
	scaffold1132	WUBlastX	DNA_TcMar-Marin	553362	553628	65	-	.	.
scaffold1132	subtractBed	intrn	602135	602171	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	602135	602171	74	+	.	.
scaffold1132	subtractBed	intrn	604488	604942	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	604488	604942	757	+	.	.
scaffold1132	subtractBed	intrn	604947	605188	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	604947	605206	337	+	.	.
scaffold1132	subtractBed	intrn	617148	617224	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	617148	617224	120	+	.	.
scaffold1132	subtractBed	intrn	620874	620911	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	620874	620911	76	+	.	.
scaffold1132	subtractBed	intrn	627651	627761	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	627651	627761	132	+	.	.
scaffold1132	subtractBed	intrn	629690	629737	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	629690	629737	96	+	.	.
scaffold1132	subtractBed	intrn	632670	632722	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	632670	632722	106	+	.	.
scaffold1132	subtractBed	intrn	633337	633386	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	633337	633386	100	+	.	.
scaffold1132	subtractBed	intrn	634747	634794	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	634747	634794	96	+	.	.
scaffold1132	subtractBed	intrn	634792	634857	.	-	.	Parent=CGI_10023325;
	scaffold1132	TRF	Tandem_Repeat	634792	634857	73	+	.	.
scaffold1132	subtractBed	intrn	668991	669028	.	-	.	Parent=CGI_10023326;
	scaffold1132	TRF	Tandem_Repeat	668991	669028	51	+	.	.
scaffold1132	subtractBed	intrn	720247	720503	.	-	.	Parent=CGI_10023330;
	scaffold1132	WUBlastX	LTR_Gypsy	720247	720516	81	-	.	.
scaffold1132	subtractBed	intrn	718827	719204	.	-	.	Parent=CGI_10023330;
	scaffold1132	WUBlastX	LTR_Gypsy	718827	719204	95	-	.	.
scaffold1132	subtractBed	intrn	718758	719192	.	-	.	Parent=CGI_10023330;
	scaffold1132	WUBlastX	LTR_Gypsy	718758	719192	45	-	.	.
scaffold1132	subtractBed	intrn	719472	719555	.	-	.	Parent=CGI_10023330;
	scaffold1132	WUBlastX	LTR_Gypsy	719472	719555	20	-	.	.
scaffold1132	subtractBed	intrn	718758	719291	.	-	.	Parent=CGI_10023330;
	scaffold1132	WUBlastX	LTR_Gypsy	718758	719291	28	-	.	.
scaffold1132	subtractBed	intrn	801694	801740	.	+	.	Parent=CGI_10023335;
	scaffold1132	TRF	Tandem_Repeat	801694	801740	94	+	.	.
scaffold1132	subtractBed	intrn	816647	816770	.	-	.	Parent=CGI_10023337;
	scaffold1132	TRF	Tandem_Repeat	816647	816770	62	+	.	.
scaffold1134	subtractBed	intrn	32554	33344	.	-	.	Parent=CGI_10004505;
	scaffold1134	TRF	Tandem_Repeat	32554	33344	1173	+	.	.
scaffold1134	subtractBed	intrn	40054	41185	.	-	.	Parent=CGI_10004505;
	scaffold1134	TRF	Tandem_Repeat	40054	41185	1196	+	.	.
scaffold1134	subtractBed	intrn	53433	53499	.	-	.	Parent=CGI_10004506;
	scaffold1134	TRF	Tandem_Repeat	53433	53499	80	+	.	.
scaffold1134	subtractBed	intrn	53996	54027	.	-	.	Parent=CGI_10004506;
	scaffold1134	TRF	Tandem_Repeat	53996	54027	50	+	.	.
scaffold1134	subtractBed	intrn	54233	54280	.	-	.	Parent=CGI_10004506;
	scaffold1134	TRF	Tandem_Repeat	54233	54280	96	+	.	.
scaffold1134	subtractBed	intrn	53433	53499	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	53433	53499	80	+	.	.
scaffold1134	subtractBed	intrn	53996	54027	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	53996	54027	50	+	.	.
scaffold1134	subtractBed	intrn	54233	54280	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	54233	54280	96	+	.	.
scaffold1134	subtractBed	intrn	56688	56754	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	56688	56754	89	+	.	.
scaffold1134	subtractBed	intrn	62648	62754	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	62648	62754	196	+	.	.
scaffold1134	subtractBed	intrn	71913	71945	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	71913	71945	57	+	.	.
scaffold1134	subtractBed	intrn	73991	74129	.	+	.	Parent=CGI_10004507;
	scaffold1134	TRF	Tandem_Repeat	73991	74129	118	+	.	.
scaffold1134	subtractBed	intrn	75491	75575	.	+	.	Parent=CGI_10004507;
	scaffold1134	WUBlastX	LINE_RTE-BovB	75491	75637	55	-	.	.
scaffold1136	subtractBed	intrn	46801	46854	.	+	.	Parent=CGI_10003080;
	scaffold1136	WUBlastX	LINE_RTE-X	46801	46854	20	+	.	.
scaffold1136	subtractBed	intrn	46060	46464	.	+	.	Parent=CGI_10003080;
	scaffold1136	WUBlastX	LINE_RTE-X	46060	46464	158	+	.	.
scaffold1136	subtractBed	intrn	46024	46506	.	+	.	Parent=CGI_10003080;
	scaffold1136	WUBlastX	LINE_RTE-X	46024	46506	103	+	.	.
scaffold1136	subtractBed	intrn	46774	46827	.	+	.	Parent=CGI_10003080;
	scaffold1136	WUBlastX	LINE_RTE-X	46774	46827	21	+	.	.
scaffold1136	subtractBed	intrn	45820	46434	.	+	.	Parent=CGI_10003080;
	scaffold1136	WUBlastX	LINE_I	45820	46434	20	+	.	.
scaffold1138	subtractBed	intrn	40713	40758	.	-	.	Parent=CGI_10015365;
	scaffold1138	TRF	Tandem_Repeat	40713	40758	67	+	.	.
scaffold1138	subtractBed	intrn	76717	76766	.	-	.	Parent=CGI_10015367;
	scaffold1138	TRF	Tandem_Repeat	76717	76766	57	+	.	.
scaffold1138	subtractBed	intrn	175902	176087	.	+	.	Parent=CGI_10015372;
	scaffold1138	WUBlastX	LTR_Gypsy	175902	176087	38	+	.	.
scaffold1138	subtractBed	intrn	175441	176451	.	+	.	Parent=CGI_10015372;
	scaffold1138	WUBlastX	LTR_Gypsy	175441	176451	32	+	.	.
scaffold1138	subtractBed	intrn	176098	176454	.	+	.	Parent=CGI_10015372;
	scaffold1138	WUBlastX	LTR_Gypsy	176098	176454	84	+	.	.
scaffold1138	subtractBed	intrn	185523	185804	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	LINE_CR1	185523	185804	109	+	.	.
scaffold1138	subtractBed	intrn	185523	185879	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	LINE_CR1	185523	185879	70	+	.	.
scaffold1138	subtractBed	intrn	185523	185960	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	LINE_L2	185523	185960	29	+	.	.
scaffold1138	subtractBed	intrn	185466	185804	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	LINE_CR1	185466	185804	90	+	.	.
scaffold1138	subtractBed	intrn	189705	190187	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	DNA_P	189705	190187	124	+	.	.
scaffold1138	subtractBed	intrn	190172	190189	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	DNA_P	190172	191221	131	+	.	.
scaffold1138	subtractBed	intrn	189525	190187	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	DNA_P	189525	190187	104	+	.	.
scaffold1138	subtractBed	intrn	189076	189189	.	-	.	Parent=CGI_10015373;
	scaffold1138	WUBlastX	DNA_P	189076	189189	24	+	.	.
scaffold1138	subtractBed	intrn	189705	190187	.	+	.	Parent=CGI_10015374;
	scaffold1138	WUBlastX	DNA_P	189705	190187	124	+	.	.
scaffold1138	subtractBed	intrn	190172	190189	.	+	.	Parent=CGI_10015374;
	scaffold1138	WUBlastX	DNA_P	190172	191221	131	+	.	.
scaffold1138	subtractBed	intrn	189525	190187	.	+	.	Parent=CGI_10015374;
	scaffold1138	WUBlastX	DNA_P	189525	190187	104	+	.	.
scaffold1138	subtractBed	intrn	189076	189189	.	+	.	Parent=CGI_10015374;
	scaffold1138	WUBlastX	DNA_P	189076	189189	24	+	.	.
scaffold1138	subtractBed	intrn	275017	275997	.	+	.	Parent=CGI_10015375;
	scaffold1138	WUBlastX	DNA_En-Spm	275017	275997	644	+	.	.
scaffold1138	subtractBed	intrn	275952	276137	.	+	.	Parent=CGI_10015375;
	scaffold1138	WUBlastX	DNA_En-Spm	275952	276137	61	+	.	.
scaffold1138	subtractBed	intrn	274314	275024	.	+	.	Parent=CGI_10015375;
	scaffold1138	WUBlastX	DNA_En-Spm	274314	275024	397	+	.	.
scaffold1138	subtractBed	intrn	288922	289320	.	+	.	Parent=CGI_10015375;
	scaffold1138	WUBlastX	DNA_TcMar-Fot1	288922	289320	138	+	.	.
scaffold1138	subtractBed	intrn	296461	296673	.	-	.	Parent=CGI_10015377;
	scaffold1138	WUBlastX	DNA_Harbinger	296461	296673	73	+	.	.
scaffold1138	subtractBed	intrn	329532	329595	.	-	.	Parent=CGI_10015379;
	scaffold1138	TRF	Tandem_Repeat	329532	329595	101	+	.	.
scaffold1138	subtractBed	intrn	354732	355246	.	+	.	Parent=CGI_10015381;
	scaffold1138	TRF	Tandem_Repeat	354732	355246	715	+	.	.
scaffold1138	subtractBed	intrn	361363	361394	.	+	.	Parent=CGI_10015381;
	scaffold1138	TRF	Tandem_Repeat	361363	361394	57	+	.	.
scaffold1141	subtractBed	intrn	8670	8700	.	+	.	Parent=CGI_10003193;
	scaffold1141	TRF	Tandem_Repeat	8670	8700	62	+	.	.
scaffold1142	subtractBed	intrn	23967	24007	.	+	.	Parent=CGI_10008525;
	scaffold1142	TRF	Tandem_Repeat	23967	24007	68	+	.	.
scaffold1142	subtractBed	intrn	27786	28511	.	+	.	Parent=CGI_10008525;
	scaffold1142	WUBlastX	LINE_L1-Tx1	27786	28511	67	+	.	.
scaffold1142	subtractBed	intrn	27897	28544	.	+	.	Parent=CGI_10008525;
	scaffold1142	WUBlastX	LINE_L1	27897	28544	108	+	.	.
scaffold1142	subtractBed	intrn	32324	32356	.	+	.	Parent=CGI_10008525;
	scaffold1142	TRF	Tandem_Repeat	32324	32356	66	+	.	.
scaffold1142	subtractBed	intrn	38638	38708	.	+	.	Parent=CGI_10008525;
	scaffold1142	TRF	Tandem_Repeat	38638	38708	142	+	.	.
scaffold1142	subtractBed	intrn	50952	51041	.	+	.	Parent=CGI_10008525;
	scaffold1142	TRF	Tandem_Repeat	50952	51041	153	+	.	.
scaffold1142	subtractBed	intrn	62620	62664	.	-	.	Parent=CGI_10008527;
	scaffold1142	TRF	Tandem_Repeat	62620	62664	90	+	.	.
scaffold1142	subtractBed	intrn	200397	200440	.	+	.	Parent=CGI_10008535;
	scaffold1142	TRF	Tandem_Repeat	200397	200440	88	+	.	.
scaffold1143	subtractBed	intrn	111837	111885	.	+	.	Parent=CGI_10009140;
	scaffold1143	TRF	Tandem_Repeat	111837	111885	98	+	.	.
scaffold1143	subtractBed	intrn	114036	114128	.	+	.	Parent=CGI_10009140;
	scaffold1143	TRF	Tandem_Repeat	114036	114128	53	+	.	.
scaffold1143	subtractBed	intrn	123251	123287	.	-	.	Parent=CGI_10009141;
	scaffold1143	TRF	Tandem_Repeat	123251	123287	74	+	.	.
scaffold1143	subtractBed	intrn	123029	123154	.	-	.	Parent=CGI_10009141;
	scaffold1143	WUBlastX	DNA_IS4EU	123029	123154	32	-	.	.
scaffold1143	subtractBed	intrn	123287	123934	.	-	.	Parent=CGI_10009141;
	scaffold1143	WUBlastX	DNA_IS4EU	123287	123934	71	-	.	.
scaffold1143	subtractBed	intrn	123305	124106	.	-	.	Parent=CGI_10009141;
	scaffold1143	WUBlastX	DNA_IS4EU	123305	124111	70	-	.	.
scaffold1143	subtractBed	intrn	123305	123835	.	-	.	Parent=CGI_10009141;
	scaffold1143	WUBlastX	DNA_Kolobok-IS4	123305	123835	87	-	.	.
scaffold1143	subtractBed	intrn	123305	123694	.	-	.	Parent=CGI_10009141;
	scaffold1143	WUBlastX	DNA_IS4EU	123305	123694	96	-	.	.
scaffold1143	subtractBed	intrn	197571	197754	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	197571	197754	289	+	.	.
scaffold1143	subtractBed	intrn	199852	200254	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	199852	200267	710	+	.	.
scaffold1143	subtractBed	intrn	201821	202462	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	201821	202462	138	+	.	.
scaffold1143	subtractBed	intrn	202354	202484	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	202354	202484	113	+	.	.
scaffold1143	subtractBed	intrn	201838	202510	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	201838	202510	869	+	.	.
scaffold1143	subtractBed	intrn	202731	203203	.	-	.	Parent=CGI_10009142;
	scaffold1143	TRF	Tandem_Repeat	202731	203203	806	+	.	.
scaffold1144	subtractBed	intrn	22657	22741	.	+	.	Parent=CGI_10013953;
	scaffold1144	TRF	Tandem_Repeat	22657	22741	170	+	.	.
scaffold1144	subtractBed	intrn	56163	56965	.	+	.	Parent=CGI_10013956;
	scaffold1144	TRF	Tandem_Repeat	56163	56965	1309	+	.	.
scaffold1144	subtractBed	intrn	57013	57066	.	+	.	Parent=CGI_10013956;
	scaffold1144	TRF	Tandem_Repeat	57013	57066	65	+	.	.
scaffold1144	subtractBed	intrn	57013	57069	.	+	.	Parent=CGI_10013956;
	scaffold1144	TRF	Tandem_Repeat	57013	57069	80	+	.	.
scaffold1144	subtractBed	intrn	60582	60623	.	+	.	Parent=CGI_10013956;
	scaffold1144	TRF	Tandem_Repeat	60582	60623	59	+	.	.
scaffold1144	subtractBed	intrn	62647	63467	.	+	.	Parent=CGI_10013956;
	scaffold1144	TRF	Tandem_Repeat	62647	63467	789	+	.	.
scaffold1144	subtractBed	intrn	56163	56965	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	56163	56965	1309	+	.	.
scaffold1144	subtractBed	intrn	57013	57066	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	57013	57066	65	+	.	.
scaffold1144	subtractBed	intrn	57013	57069	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	57013	57069	80	+	.	.
scaffold1144	subtractBed	intrn	60582	60623	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	60582	60623	59	+	.	.
scaffold1144	subtractBed	intrn	62647	63467	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	62647	63467	789	+	.	.
scaffold1144	subtractBed	intrn	70588	70637	.	-	.	Parent=CGI_10013957;
	scaffold1144	TRF	Tandem_Repeat	70588	70637	100	+	.	.
scaffold1144	subtractBed	intrn	70588	70637	.	+	.	Parent=CGI_10013958;
	scaffold1144	TRF	Tandem_Repeat	70588	70637	100	+	.	.
scaffold1144	subtractBed	intrn	95369	95551	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	95369	95551	251	+	.	.
scaffold1144	subtractBed	intrn	95310	95551	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	95310	95551	263	+	.	.
scaffold1144	subtractBed	intrn	110485	110583	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	110485	110583	173	+	.	.
scaffold1144	subtractBed	intrn	110632	110725	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	110632	110725	116	+	.	.
scaffold1144	subtractBed	intrn	111315	111543	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	111315	111543	128	+	.	.
scaffold1144	subtractBed	intrn	111315	111453	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	111315	111453	84	+	.	.
scaffold1144	subtractBed	intrn	112177	112204	.	+	.	Parent=CGI_10013960;
	scaffold1144	TRF	Tandem_Repeat	112177	112204	56	+	.	.
scaffold1144	subtractBed	intrn	370473	370503	.	-	.	Parent=CGI_10013966;
	scaffold1144	TRF	Tandem_Repeat	370473	370503	53	+	.	.
scaffold1148	subtractBed	intrn	65530	65555	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	65530	65555	52	+	.	.
scaffold1148	subtractBed	intrn	70513	70885	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	70513	70885	369	+	.	.
scaffold1148	subtractBed	intrn	75958	76466	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	75958	76466	295	+	.	.
scaffold1148	subtractBed	intrn	75958	76466	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	75958	76466	262	+	.	.
scaffold1148	subtractBed	intrn	75951	76486	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	75951	76486	481	+	.	.
scaffold1148	subtractBed	intrn	75978	76486	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	75978	76486	517	+	.	.
scaffold1148	subtractBed	intrn	78010	78034	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	78010	78034	50	+	.	.
scaffold1148	subtractBed	intrn	79896	79932	.	-	.	Parent=CGI_10008246;
	scaffold1148	TRF	Tandem_Repeat	79896	79932	74	+	.	.
scaffold1148	subtractBed	intrn	134594	134660	.	+	.	Parent=CGI_10008248;
	scaffold1148	TRF	Tandem_Repeat	134594	134660	134	+	.	.
scaffold1148	subtractBed	intrn	136784	136821	.	+	.	Parent=CGI_10008248;
	scaffold1148	TRF	Tandem_Repeat	136784	136821	58	+	.	.
scaffold1148	subtractBed	intrn	161604	161711	.	+	.	Parent=CGI_10008249;
	scaffold1148	WUBlastX	DNA_TcMar-Tc1	161604	161711	35	-	.	.
scaffold1148	subtractBed	intrn	160710	161027	.	+	.	Parent=CGI_10008249;
	scaffold1148	WUBlastX	DNA_TcMar-Tc1	160710	161027	76	-	.	.
scaffold1148	subtractBed	intrn	161051	161644	.	+	.	Parent=CGI_10008249;
	scaffold1148	WUBlastX	DNA_TcMar-Tc1	161051	161644	218	-	.	.
scaffold1149	subtractBed	intrn	7761	8104	.	-	.	Parent=CGI_10023443;
	scaffold1149	TRF	Tandem_Repeat	7761	8104	566	+	.	.
scaffold1149	subtractBed	intrn	14907	14965	.	+	.	Parent=CGI_10023444;
	scaffold1149	TRF	Tandem_Repeat	14907	14965	118	+	.	.
scaffold1149	subtractBed	intrn	15233	15283	.	+	.	Parent=CGI_10023444;
	scaffold1149	TRF	Tandem_Repeat	15233	15283	102	+	.	.
scaffold1149	subtractBed	intrn	30652	31031	.	-	.	Parent=CGI_10023446;
	scaffold1149	TRF	Tandem_Repeat	30652	31031	598	+	.	.
scaffold1149	subtractBed	intrn	45244	45281	.	+	.	Parent=CGI_10023447;
	scaffold1149	TRF	Tandem_Repeat	45244	45281	58	+	.	.
scaffold1149	subtractBed	intrn	39706	39978	.	+	.	Parent=CGI_10023447;
	scaffold1149	WUBlastX	LINE_Penelope	39706	39978	73	+	.	.
scaffold1149	subtractBed	intrn	39439	39978	.	+	.	Parent=CGI_10023447;
	scaffold1149	WUBlastX	LINE_Penelope	39439	39978	69	+	.	.
scaffold1149	subtractBed	intrn	51953	52572	.	+	.	Parent=CGI_10023447;
	scaffold1149	TRF	Tandem_Repeat	51953	52572	925	+	.	.
scaffold1149	subtractBed	intrn	126480	126605	.	+	.	Parent=CGI_10023452;
	scaffold1149	WUBlastX	LTR_Ngaro	126480	126605	58	+	.	.
scaffold1149	subtractBed	intrn	126626	126865	.	+	.	Parent=CGI_10023452;
	scaffold1149	WUBlastX	LTR_Ngaro	126626	126865	78	+	.	.
scaffold1149	subtractBed	intrn	126659	126955	.	+	.	Parent=CGI_10023452;
	scaffold1149	WUBlastX	LTR_Ngaro	126659	126955	27	+	.	.
scaffold1149	subtractBed	intrn	126468	126659	.	+	.	Parent=CGI_10023452;
	scaffold1149	WUBlastX	LTR_Ngaro	126468	126659	53	+	.	.
scaffold1149	subtractBed	intrn	132281	132354	.	+	.	Parent=CGI_10023452;
	scaffold1149	TRF	Tandem_Repeat	132281	132354	85	+	.	.
scaffold1149	subtractBed	intrn	138389	138577	.	+	.	Parent=CGI_10023452;
	scaffold1149	WUBlastX	DNA_TcMar-Marin	138389	138577	63	+	.	.
scaffold1149	subtractBed	intrn	164943	165398	.	+	.	Parent=CGI_10023454;
	scaffold1149	WUBlastX	LINE_RTE-X	164943	165398	83	+	.	.
scaffold1149	subtractBed	intrn	164412	164639	.	+	.	Parent=CGI_10023454;
	scaffold1149	WUBlastX	LINE_RTE-X	164412	164639	77	+	.	.
scaffold1149	subtractBed	intrn	164650	164793	.	+	.	Parent=CGI_10023454;
	scaffold1149	WUBlastX	LINE_RTE-X	164650	164793	40	+	.	.
scaffold1149	subtractBed	intrn	177280	177412	.	+	.	Parent=CGI_10023454;
	scaffold1149	TRF	Tandem_Repeat	177280	177412	106	+	.	.
scaffold1149	subtractBed	intrn	177280	177527	.	+	.	Parent=CGI_10023454;
	scaffold1149	TRF	Tandem_Repeat	177280	177527	117	+	.	.
scaffold1149	subtractBed	intrn	177436	177531	.	+	.	Parent=CGI_10023454;
	scaffold1149	TRF	Tandem_Repeat	177436	177531	165	+	.	.
scaffold1149	subtractBed	intrn	177436	177693	.	+	.	Parent=CGI_10023454;
	scaffold1149	TRF	Tandem_Repeat	177436	177693	262	+	.	.
scaffold1149	subtractBed	intrn	177280	177412	.	-	.	Parent=CGI_10023457;
	scaffold1149	TRF	Tandem_Repeat	177280	177412	106	+	.	.
scaffold1149	subtractBed	intrn	177280	177527	.	-	.	Parent=CGI_10023457;
	scaffold1149	TRF	Tandem_Repeat	177280	177527	117	+	.	.
scaffold1149	subtractBed	intrn	177436	177531	.	-	.	Parent=CGI_10023457;
	scaffold1149	TRF	Tandem_Repeat	177436	177531	165	+	.	.
scaffold1149	subtractBed	intrn	177436	177693	.	-	.	Parent=CGI_10023457;
	scaffold1149	TRF	Tandem_Repeat	177436	177693	262	+	.	.
scaffold1149	subtractBed	intrn	218381	218659	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	LINE_RTE-X	218381	218659	53	+	.	.
scaffold1149	subtractBed	intrn	220052	220396	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	DNA_hAT-Ac	220052	220396	48	+	.	.
scaffold1149	subtractBed	intrn	218465	219424	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	LINE_RTE-X	218465	219424	354	+	.	.
scaffold1149	subtractBed	intrn	217415	218347	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	LINE_RTE-X	217415	218347	352	-	.	.
scaffold1149	subtractBed	intrn	219947	220219	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	DNA_hAT-Ac	219947	220219	67	+	.	.
scaffold1149	subtractBed	intrn	220073	220261	.	-	.	Parent=CGI_10023460;
	scaffold1149	WUBlastX	DNA_hAT-Ac	220073	220261	72	+	.	.
scaffold1149	subtractBed	intrn	231476	231510	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	231476	231510	70	+	.	.
scaffold1149	subtractBed	intrn	252573	252602	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	252573	252602	53	+	.	.
scaffold1149	subtractBed	intrn	254856	254937	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	254856	254937	164	+	.	.
scaffold1149	subtractBed	intrn	255446	255476	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	255446	255476	55	+	.	.
scaffold1149	subtractBed	intrn	256086	256130	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	256086	256130	90	+	.	.
scaffold1149	subtractBed	intrn	262654	262727	.	+	.	Parent=CGI_10023462;
	scaffold1149	TRF	Tandem_Repeat	262654	262727	148	+	.	.
scaffold1149	subtractBed	intrn	274255	274292	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	274255	274292	76	+	.	.
scaffold1149	subtractBed	intrn	276725	277539	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	276725	277539	1026	+	.	.
scaffold1149	subtractBed	intrn	277709	277746	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	277709	277746	51	+	.	.
scaffold1149	subtractBed	intrn	278811	278922	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	278811	278922	206	+	.	.
scaffold1149	subtractBed	intrn	281539	281588	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	281539	281588	66	+	.	.
scaffold1149	subtractBed	intrn	281539	281588	.	-	.	Parent=CGI_10023463;
	scaffold1149	TRF	Tandem_Repeat	281539	281588	75	+	.	.
scaffold1149	subtractBed	intrn	371472	371522	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	371472	371522	52	+	.	.
scaffold1149	subtractBed	intrn	374596	374649	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	374596	374649	90	+	.	.
scaffold1149	subtractBed	intrn	379385	379430	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	379385	379430	92	+	.	.
scaffold1149	subtractBed	intrn	381502	381550	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	381502	381550	62	+	.	.
scaffold1149	subtractBed	intrn	381550	381592	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	381550	381592	86	+	.	.
scaffold1149	subtractBed	intrn	395813	395930	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	395813	395930	75	+	.	.
scaffold1149	subtractBed	intrn	395864	395986	.	-	.	Parent=CGI_10023465;
	scaffold1149	TRF	Tandem_Repeat	395864	395986	88	+	.	.
scaffold1149	subtractBed	intrn	436163	436220	.	-	.	Parent=CGI_10023466;
	scaffold1149	TRF	Tandem_Repeat	436163	436220	116	+	.	.
scaffold1149	subtractBed	intrn	436600	436649	.	-	.	Parent=CGI_10023466;
	scaffold1149	TRF	Tandem_Repeat	436600	436649	75	+	.	.
scaffold1149	subtractBed	intrn	509573	509637	.	-	.	Parent=CGI_10023469;
	scaffold1149	TRF	Tandem_Repeat	509573	509637	85	+	.	.
scaffold1149	subtractBed	intrn	522897	524103	.	-	.	Parent=CGI_10023470;
	scaffold1149	TRF	Tandem_Repeat	522867	524103	1557	+	.	.
scaffold1149	subtractBed	intrn	528369	528470	.	-	.	Parent=CGI_10023471;
	scaffold1149	TRF	Tandem_Repeat	528369	528470	131	+	.	.
scaffold1149	subtractBed	intrn	528353	528469	.	-	.	Parent=CGI_10023471;
	scaffold1149	TRF	Tandem_Repeat	528353	528469	101	+	.	.
scaffold1149	subtractBed	intrn	532427	532728	.	-	.	Parent=CGI_10023471;
	scaffold1149	TRF	Tandem_Repeat	532427	532728	186	+	.	.
scaffold1149	subtractBed	intrn	532412	532728	.	-	.	Parent=CGI_10023471;
	scaffold1149	TRF	Tandem_Repeat	532412	532728	203	+	.	.
scaffold1149	subtractBed	intrn	636857	636886	.	+	.	Parent=CGI_10023476;
	scaffold1149	TRF	Tandem_Repeat	636857	636886	51	+	.	.
scaffold1149	subtractBed	intrn	707622	708818	.	+	.	Parent=CGI_10023478;
	scaffold1149	WUBlastX	LINE_RTE-BovB	707622	708818	1036	-	.	.
scaffold115	subtractBed	intrn	8144	8191	.	-	.	Parent=CGI_10021369;
	scaffold115	TRF	Tandem_Repeat	8144	8191	87	+	.	.
scaffold115	subtractBed	intrn	8144	8191	.	+	.	Parent=CGI_10021370;
	scaffold115	TRF	Tandem_Repeat	8144	8191	87	+	.	.
scaffold115	subtractBed	intrn	26034	26060	.	-	.	Parent=CGI_10021371;
	scaffold115	TRF	Tandem_Repeat	26034	26060	54	+	.	.
scaffold115	subtractBed	intrn	31843	31875	.	-	.	Parent=CGI_10021371;
	scaffold115	TRF	Tandem_Repeat	31843	31875	50	+	.	.
scaffold115	subtractBed	intrn	41020	41066	.	-	.	Parent=CGI_10021372;
	scaffold115	TRF	Tandem_Repeat	41020	41066	94	+	.	.
scaffold115	subtractBed	intrn	47222	47289	.	-	.	Parent=CGI_10021374;
	scaffold115	TRF	Tandem_Repeat	47222	47289	127	+	.	.
scaffold115	subtractBed	intrn	129499	129840	.	-	.	Parent=CGI_10021378;
	scaffold115	WUBlastX	DNA_hAT-Tip100	129499	129840	94	+	.	.
scaffold115	subtractBed	intrn	129382	129834	.	-	.	Parent=CGI_10021378;
	scaffold115	WUBlastX	DNA_hAT-Tip100	129382	129834	79	+	.	.
scaffold115	subtractBed	intrn	129845	130600	.	-	.	Parent=CGI_10021378;
	scaffold115	WUBlastX	LINE_RTE-X	129845	130600	159	-	.	.
scaffold115	subtractBed	intrn	130720	131259	.	-	.	Parent=CGI_10021378;
	scaffold115	WUBlastX	LINE_L1	130720	131259	224	-	.	.
scaffold115	subtractBed	intrn	130639	131175	.	-	.	Parent=CGI_10021378;
	scaffold115	WUBlastX	LINE_L1	130639	131175	65	-	.	.
scaffold115	subtractBed	intrn	187235	187307	.	+	.	Parent=CGI_10021383;
	scaffold115	TRF	Tandem_Repeat	187235	187307	110	+	.	.
scaffold115	subtractBed	intrn	188060	188087	.	+	.	Parent=CGI_10021383;
	scaffold115	TRF	Tandem_Repeat	188060	188087	56	+	.	.
scaffold115	subtractBed	intrn	187695	187859	.	+	.	Parent=CGI_10021383;
	scaffold115	WUBlastX	LINE_RTE-BovB	187695	187859	133	+	.	.
scaffold115	subtractBed	intrn	437775	437814	.	-	.	Parent=CGI_10021394;
	scaffold115	TRF	Tandem_Repeat	437775	437814	80	+	.	.
scaffold115	subtractBed	intrn	439163	439208	.	-	.	Parent=CGI_10021394;
	scaffold115	TRF	Tandem_Repeat	439163	439208	92	+	.	.
scaffold115	subtractBed	intrn	475048	475089	.	+	.	Parent=CGI_10021398;
	scaffold115	TRF	Tandem_Repeat	475048	475089	84	+	.	.
scaffold115	subtractBed	intrn	479939	480094	.	+	.	Parent=CGI_10021398;
	scaffold115	TRF	Tandem_Repeat	479916	480094	243	+	.	.
scaffold115	subtractBed	intrn	488016	488058	.	-	.	Parent=CGI_10021399;
	scaffold115	TRF	Tandem_Repeat	488016	488058	86	+	.	.
scaffold115	subtractBed	intrn	488517	488562	.	-	.	Parent=CGI_10021399;
	scaffold115	TRF	Tandem_Repeat	488517	488562	92	+	.	.
scaffold115	subtractBed	intrn	490269	490894	.	-	.	Parent=CGI_10021400;
	scaffold115	TRF	Tandem_Repeat	490269	490894	379	+	.	.
scaffold115	subtractBed	intrn	508742	509207	.	-	.	Parent=CGI_10021402;
	scaffold115	TRF	Tandem_Repeat	508742	509207	359	+	.	.
scaffold115	subtractBed	intrn	512636	512683	.	-	.	Parent=CGI_10021402;
	scaffold115	TRF	Tandem_Repeat	512636	512683	78	+	.	.
scaffold115	subtractBed	intrn	513923	514941	.	-	.	Parent=CGI_10021402;
	scaffold115	TRF	Tandem_Repeat	513923	514941	1320	+	.	.
scaffold115	subtractBed	intrn	513900	514941	.	-	.	Parent=CGI_10021402;
	scaffold115	TRF	Tandem_Repeat	513900	514941	1467	+	.	.
scaffold115	subtractBed	intrn	524479	524735	.	-	.	Parent=CGI_10021402;
	scaffold115	TRF	Tandem_Repeat	524479	524735	381	+	.	.
scaffold115	subtractBed	intrn	532089	532132	.	+	.	Parent=CGI_10021403;
	scaffold115	TRF	Tandem_Repeat	532089	532132	88	+	.	.
scaffold115	subtractBed	intrn	535055	535427	.	+	.	Parent=CGI_10021403;
	scaffold115	TRF	Tandem_Repeat	535055	535427	334	+	.	.
scaffold115	subtractBed	intrn	536406	537106	.	+	.	Parent=CGI_10021403;
	scaffold115	TRF	Tandem_Repeat	536406	537106	1103	+	.	.
scaffold115	subtractBed	intrn	555985	556116	.	+	.	Parent=CGI_10021404;
	scaffold115	TRF	Tandem_Repeat	555985	556116	228	+	.	.
scaffold115	subtractBed	intrn	556548	556619	.	+	.	Parent=CGI_10021404;
	scaffold115	TRF	Tandem_Repeat	556548	556619	126	+	.	.
scaffold115	subtractBed	intrn	561113	561145	.	+	.	Parent=CGI_10021404;
	scaffold115	TRF	Tandem_Repeat	561113	561145	50	+	.	.
scaffold115	subtractBed	intrn	561167	561209	.	+	.	Parent=CGI_10021404;
	scaffold115	TRF	Tandem_Repeat	561167	561209	86	+	.	.
scaffold115	subtractBed	intrn	577836	577885	.	+	.	Parent=CGI_10021407;
	scaffold115	TRF	Tandem_Repeat	577836	577885	84	+	.	.
scaffold115	subtractBed	intrn	581054	581323	.	+	.	Parent=CGI_10021407;
	scaffold115	WUBlastX	LINE_CR1-L2	581054	581323	63	+	.	.
scaffold115	subtractBed	intrn	581054	581371	.	+	.	Parent=CGI_10021407;
	scaffold115	WUBlastX	LINE_CR1-L2	581054	581371	58	+	.	.
scaffold115	subtractBed	intrn	580695	581072	.	+	.	Parent=CGI_10021407;
	scaffold115	WUBlastX	LINE_CR1-L2	580695	581072	86	+	.	.
scaffold115	subtractBed	intrn	580266	581072	.	+	.	Parent=CGI_10021407;
	scaffold115	WUBlastX	LINE_L2	580266	581072	72	+	.	.
scaffold115	subtractBed	intrn	621212	621247	.	+	.	Parent=CGI_10021409;
	scaffold115	TRF	Tandem_Repeat	621212	621247	63	+	.	.
scaffold115	subtractBed	intrn	622375	622459	.	+	.	Parent=CGI_10021409;
	scaffold115	TRF	Tandem_Repeat	622375	622459	143	+	.	.
scaffold115	subtractBed	intrn	625843	626160	.	+	.	Parent=CGI_10021409;
	scaffold115	WUBlastX	DNA_IS4EU	625843	626160	58	-	.	.
scaffold115	subtractBed	intrn	624012	624152	.	+	.	Parent=CGI_10021409;
	scaffold115	WUBlastX	DNA_TcMar-Marin	624012	624152	38	+	.	.
scaffold115	subtractBed	intrn	624054	624170	.	+	.	Parent=CGI_10021409;
	scaffold115	WUBlastX	DNA_TcMar-Marin	624054	624170	36	+	.	.
scaffold115	subtractBed	intrn	624640	624714	.	+	.	Parent=CGI_10021409;
	scaffold115	WUBlastX	DNA_TcMar-Marin	624640	624714	28	+	.	.
scaffold115	subtractBed	intrn	628546	629052	.	+	.	Parent=CGI_10021409;
	scaffold115	TRF	Tandem_Repeat	628530	629052	455	+	.	.
scaffold115	subtractBed	intrn	641063	641166	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	641063	641166	62	+	.	.
scaffold115	subtractBed	intrn	641063	641166	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	641063	641166	58	+	.	.
scaffold115	subtractBed	intrn	642596	643378	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	642596	643378	1230	+	.	.
scaffold115	subtractBed	intrn	642596	643378	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	642596	643378	1239	+	.	.
scaffold115	subtractBed	intrn	645935	646292	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	645935	646292	167	+	.	.
scaffold115	subtractBed	intrn	645997	646328	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	645997	646328	558	+	.	.
scaffold115	subtractBed	intrn	649848	649971	.	-	.	Parent=CGI_10021410;
	scaffold115	TRF	Tandem_Repeat	649848	649971	160	+	.	.
scaffold1154	subtractBed	intrn	10159	10186	.	-	.	Parent=CGI_10026147;
	scaffold1154	TRF	Tandem_Repeat	10159	10186	56	+	.	.
scaffold1154	subtractBed	intrn	88760	88816	.	+	.	Parent=CGI_10026153;
	scaffold1154	TRF	Tandem_Repeat	88760	88816	80	+	.	.
scaffold1154	subtractBed	intrn	88759	88816	.	+	.	Parent=CGI_10026153;
	scaffold1154	TRF	Tandem_Repeat	88759	88816	64	+	.	.
scaffold1154	subtractBed	intrn	88985	89812	.	+	.	Parent=CGI_10026153;
	scaffold1154	TRF	Tandem_Repeat	88985	89812	1128	+	.	.
scaffold1154	subtractBed	intrn	92844	97676	.	+	.	Parent=CGI_10026153;
	scaffold1154	TRF	Tandem_Repeat	92844	97676	6446	+	.	.
scaffold1154	subtractBed	intrn	133861	134606	.	-	.	Parent=CGI_10026155;
	scaffold1154	TRF	Tandem_Repeat	133861	134606	759	+	.	.
scaffold1154	subtractBed	intrn	173706	174545	.	-	.	Parent=CGI_10026155;
	scaffold1154	WUBlastX	DNA_PiggyBac	173706	174545	333	+	.	.
scaffold1154	subtractBed	intrn	173841	175463	.	-	.	Parent=CGI_10026155;
	scaffold1154	WUBlastX	DNA_PiggyBac	173841	175463	765	+	.	.
scaffold1154	subtractBed	intrn	221585	221809	.	-	.	Parent=CGI_10026156;
	scaffold1154	WUBlastX	LINE_RTE-X	221585	221809	53	+	.	.
scaffold1154	subtractBed	intrn	245366	245403	.	+	.	Parent=CGI_10026159;
	scaffold1154	TRF	Tandem_Repeat	245366	245403	76	+	.	.
scaffold1154	subtractBed	intrn	300561	300589	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	DNA_Kolobok-IS4	300308	300589	69	-	.	.
scaffold1154	subtractBed	intrn	307901	309988	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	DNA_P	307901	309988	925	-	.	.
scaffold1154	subtractBed	intrn	323767	323795	.	-	.	Parent=CGI_10026162;
	scaffold1154	TRF	Tandem_Repeat	323767	323795	58	+	.	.
scaffold1154	subtractBed	intrn	329125	329466	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	329125	329466	167	+	.	.
scaffold1154	subtractBed	intrn	328382	329125	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	328382	329125	125	+	.	.
scaffold1154	subtractBed	intrn	327841	328341	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	327841	328341	125	+	.	.
scaffold1154	subtractBed	intrn	328616	329119	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	328616	329119	330	+	.	.
scaffold1154	subtractBed	intrn	329125	329550	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	329125	329550	147	+	.	.
scaffold1154	subtractBed	intrn	329943	330296	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	329943	330296	152	+	.	.
scaffold1154	subtractBed	intrn	328523	329119	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	328523	329119	208	+	.	.
scaffold1154	subtractBed	intrn	330778	331749	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	330778	331749	514	+	.	.
scaffold1154	subtractBed	intrn	328664	329947	.	-	.	Parent=CGI_10026162;
	scaffold1154	WUBlastX	LTR_DIRS	328664	329947	131	+	.	.
scaffold1154	subtractBed	intrn	368480	368851	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	368480	368851	108	+	.	.
scaffold1154	subtractBed	intrn	366212	366556	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	366212	366556	126	+	.	.
scaffold1154	subtractBed	intrn	366788	367216	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_DIRS	366788	367216	26	+	.	.
scaffold1154	subtractBed	intrn	368364	368459	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	368364	368459	37	+	.	.
scaffold1154	subtractBed	intrn	368833	369360	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	368833	369360	247	+	.	.
scaffold1154	subtractBed	intrn	368379	368477	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	368379	368477	25	+	.	.
scaffold1154	subtractBed	intrn	368737	369360	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	368737	369360	187	+	.	.
scaffold1154	subtractBed	intrn	366896	368362	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LTR_Ngaro	366896	368362	691	+	.	.
scaffold1154	subtractBed	intrn	369732	369865	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LINE_RTE-X	369732	370094	79	+	.	.
scaffold1154	subtractBed	intrn	369979	370094	.	-	.	Parent=CGI_10026164;
	scaffold1154	WUBlastX	LINE_RTE-X	369732	370094	79	+	.	.
scaffold1154	subtractBed	intrn	374636	374719	.	-	.	Parent=CGI_10026164;
	scaffold1154	TRF	Tandem_Repeat	374636	374719	168	+	.	.
scaffold1154	subtractBed	intrn	368480	368851	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	368480	368851	108	+	.	.
scaffold1154	subtractBed	intrn	366212	366556	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	366212	366556	126	+	.	.
scaffold1154	subtractBed	intrn	366788	367216	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_DIRS	366788	367216	26	+	.	.
scaffold1154	subtractBed	intrn	368364	368459	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	368364	368459	37	+	.	.
scaffold1154	subtractBed	intrn	368833	369360	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	368833	369360	247	+	.	.
scaffold1154	subtractBed	intrn	368379	368477	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	368379	368477	25	+	.	.
scaffold1154	subtractBed	intrn	368737	369360	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	368737	369360	187	+	.	.
scaffold1154	subtractBed	intrn	366896	368362	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LTR_Ngaro	366896	368362	691	+	.	.
scaffold1154	subtractBed	intrn	369732	369865	.	+	.	Parent=CGI_10026165;
	scaffold1154	WUBlastX	LINE_RTE-X	369732	370094	79	+	.	.
scaffold1154	subtractBed	intrn	401284	401286	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_MuDR	401284	401529	67	-	.	.
scaffold1154	subtractBed	intrn	401284	401286	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_MuDR	401284	401583	39	-	.	.
scaffold1154	subtractBed	intrn	401516	401529	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_MuDR	401284	401529	67	-	.	.
scaffold1154	subtractBed	intrn	401516	401583	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_MuDR	401284	401583	39	-	.	.
scaffold1154	subtractBed	intrn	403774	404304	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_Harbinger	403774	404304	220	+	.	.
scaffold1154	subtractBed	intrn	403783	404427	.	-	.	Parent=CGI_10026168;
	scaffold1154	WUBlastX	DNA_Harbinger	403783	404427	192	+	.	.
scaffold1154	subtractBed	intrn	424356	424403	.	-	.	Parent=CGI_10026171;
	scaffold1154	TRF	Tandem_Repeat	424356	424403	64	+	.	.
scaffold1154	subtractBed	intrn	463339	463371	.	-	.	Parent=CGI_10026172;
	scaffold1154	TRF	Tandem_Repeat	463339	463371	66	+	.	.
scaffold1154	subtractBed	intrn	463333	463387	.	-	.	Parent=CGI_10026172;
	scaffold1154	TRF	Tandem_Repeat	463333	463387	58	+	.	.
scaffold1154	subtractBed	intrn	511412	511575	.	+	.	Parent=CGI_10026174;
	scaffold1154	TRF	Tandem_Repeat	511412	511575	310	+	.	.
scaffold1154	subtractBed	intrn	511966	512548	.	+	.	Parent=CGI_10026174;
	scaffold1154	TRF	Tandem_Repeat	511966	512548	932	+	.	.
scaffold1154	subtractBed	intrn	516432	516891	.	+	.	Parent=CGI_10026174;
	scaffold1154	TRF	Tandem_Repeat	516432	516891	773	+	.	.
scaffold1154	subtractBed	intrn	531250	531293	.	-	.	Parent=CGI_10026175;
	scaffold1154	TRF	Tandem_Repeat	531250	531293	88	+	.	.
scaffold1154	subtractBed	intrn	531291	531322	.	-	.	Parent=CGI_10026175;
	scaffold1154	TRF	Tandem_Repeat	531291	531322	64	+	.	.
scaffold1154	subtractBed	intrn	594136	594173	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	594136	594173	51	+	.	.
scaffold1154	subtractBed	intrn	597024	597085	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	597024	597085	67	+	.	.
scaffold1154	subtractBed	intrn	598806	598843	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	598806	598843	51	+	.	.
scaffold1154	subtractBed	intrn	599013	600183	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	599013	600183	1814	+	.	.
scaffold1154	subtractBed	intrn	607351	607392	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	607351	607392	61	+	.	.
scaffold1154	subtractBed	intrn	625272	625329	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	625272	625329	82	+	.	.
scaffold1154	subtractBed	intrn	625273	625329	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	625273	625329	62	+	.	.
scaffold1154	subtractBed	intrn	633976	634343	.	-	.	Parent=CGI_10026178;
	scaffold1154	TRF	Tandem_Repeat	633976	634343	529	+	.	.
scaffold1154	subtractBed	intrn	632783	633778	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	632783	633778	488	-	.	.
scaffold1154	subtractBed	intrn	635605	636108	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	635605	636108	163	-	.	.
scaffold1154	subtractBed	intrn	634460	635167	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	634460	635167	347	-	.	.
scaffold1154	subtractBed	intrn	635166	635705	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	635166	635705	119	-	.	.
scaffold1154	subtractBed	intrn	635716	636096	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	635716	636096	226	-	.	.
scaffold1154	subtractBed	intrn	636529	637512	.	-	.	Parent=CGI_10026178;
	scaffold1154	WUBlastX	LTR_DIRS	636529	637512	160	-	.	.
scaffold1154	subtractBed	intrn	625272	625329	.	+	.	Parent=CGI_10026180;
	scaffold1154	TRF	Tandem_Repeat	625272	625329	82	+	.	.
scaffold1154	subtractBed	intrn	625273	625329	.	+	.	Parent=CGI_10026180;
	scaffold1154	TRF	Tandem_Repeat	625273	625329	62	+	.	.
scaffold1154	subtractBed	intrn	633976	634343	.	+	.	Parent=CGI_10026180;
	scaffold1154	TRF	Tandem_Repeat	633976	634343	529	+	.	.
scaffold1154	subtractBed	intrn	632783	633778	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	632783	633778	488	-	.	.
scaffold1154	subtractBed	intrn	635605	636108	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	635605	636108	163	-	.	.
scaffold1154	subtractBed	intrn	634460	635167	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	634460	635167	347	-	.	.
scaffold1154	subtractBed	intrn	635166	635705	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	635166	635705	119	-	.	.
scaffold1154	subtractBed	intrn	635716	636096	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	635716	636096	226	-	.	.
scaffold1154	subtractBed	intrn	636529	637512	.	+	.	Parent=CGI_10026180;
	scaffold1154	WUBlastX	LTR_DIRS	636529	637512	160	-	.	.
scaffold1154	subtractBed	intrn	663186	663467	.	-	.	Parent=CGI_10026182;
	scaffold1154	WUBlastX	LINE_RTE-X	663186	663467	25	-	.	.
scaffold1154	subtractBed	intrn	667011	668010	.	-	.	Parent=CGI_10026182;
	scaffold1154	TRF	Tandem_Repeat	667011	668010	1334	+	.	.
scaffold1154	subtractBed	intrn	667011	668010	.	-	.	Parent=CGI_10026182;
	scaffold1154	TRF	Tandem_Repeat	667011	668010	1334	+	.	.
scaffold1154	subtractBed	intrn	667832	667935	.	-	.	Parent=CGI_10026182;
	scaffold1154	TRF	Tandem_Repeat	667832	667935	80	+	.	.
scaffold1154	subtractBed	intrn	726619	726666	.	-	.	Parent=CGI_10026183;
	scaffold1154	TRF	Tandem_Repeat	726619	726678	64	+	.	.
scaffold1154	subtractBed	intrn	726841	727021	.	-	.	Parent=CGI_10026183;
	scaffold1154	TRF	Tandem_Repeat	726841	727021	118	+	.	.
scaffold1154	subtractBed	intrn	735167	735214	.	-	.	Parent=CGI_10026183;
	scaffold1154	TRF	Tandem_Repeat	735167	735214	96	+	.	.
scaffold1154	subtractBed	intrn	763363	763477	.	-	.	Parent=CGI_10026186;
	scaffold1154	TRF	Tandem_Repeat	763363	763477	126	+	.	.
scaffold1154	subtractBed	intrn	777659	777707	.	-	.	Parent=CGI_10026187;
	scaffold1154	TRF	Tandem_Repeat	777659	777707	98	+	.	.
scaffold1154	subtractBed	intrn	800965	800994	.	-	.	Parent=CGI_10026189;
	scaffold1154	TRF	Tandem_Repeat	800965	800994	60	+	.	.
scaffold1154	subtractBed	intrn	817013	817065	.	-	.	Parent=CGI_10026191;
	scaffold1154	TRF	Tandem_Repeat	817013	817065	106	+	.	.
scaffold1154	subtractBed	intrn	813780	814136	.	-	.	Parent=CGI_10026191;
	scaffold1154	WUBlastX	LINE_RTE-X	813780	814136	60	+	.	.
scaffold1154	subtractBed	intrn	813852	814166	.	-	.	Parent=CGI_10026191;
	scaffold1154	WUBlastX	LINE_RTE-X	813852	814166	64	+	.	.
scaffold1154	subtractBed	intrn	826499	826532	.	-	.	Parent=CGI_10026193;
	scaffold1154	TRF	Tandem_Repeat	826499	826532	68	+	.	.
scaffold1154	subtractBed	intrn	826532	826588	.	-	.	Parent=CGI_10026193;
	scaffold1154	TRF	Tandem_Repeat	826532	826588	114	+	.	.
scaffold1154	subtractBed	intrn	828247	828273	.	-	.	Parent=CGI_10026193;
	scaffold1154	TRF	Tandem_Repeat	828247	828273	54	+	.	.
scaffold1154	subtractBed	intrn	942100	942603	.	-	.	Parent=CGI_10026198;
	scaffold1154	TRF	Tandem_Repeat	942100	942603	665	+	.	.
scaffold1154	subtractBed	intrn	1033077	1033415	.	+	.	Parent=CGI_10026203;
	scaffold1154	WUBlastX	LINE_RTE-X	1033077	1033415	80	+	.	.
scaffold1154	subtractBed	intrn	1033017	1033421	.	+	.	Parent=CGI_10026203;
	scaffold1154	WUBlastX	LINE_RTE-X	1033017	1033421	65	+	.	.
scaffold1154	subtractBed	intrn	1058240	1058275	.	+	.	Parent=CGI_10026204;
	scaffold1154	TRF	Tandem_Repeat	1058240	1058275	72	+	.	.
scaffold1154	subtractBed	intrn	1058240	1058275	.	-	.	Parent=CGI_10026206;
	scaffold1154	TRF	Tandem_Repeat	1058240	1058275	72	+	.	.
scaffold1154	subtractBed	intrn	1080522	1080596	.	-	.	Parent=CGI_10026207;
	scaffold1154	WUBlastX	DNA_IS4EU	1080198	1080596	142	-	.	.
scaffold1154	subtractBed	intrn	1080593	1080670	.	-	.	Parent=CGI_10026207;
	scaffold1154	WUBlastX	DNA_Kolobok-IS4	1080593	1080670	22	-	.	.
scaffold1154	subtractBed	intrn	1080676	1080801	.	-	.	Parent=CGI_10026207;
	scaffold1154	WUBlastX	DNA_IS4EU	1080676	1080801	45	-	.	.
scaffold1154	subtractBed	intrn	1112444	1112481	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1112444	1112481	58	+	.	.
scaffold1154	subtractBed	intrn	1125774	1125870	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1125774	1125870	117	+	.	.
scaffold1154	subtractBed	intrn	1126045	1126078	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1126045	1126078	50	+	.	.
scaffold1154	subtractBed	intrn	1115898	1116158	.	-	.	Parent=CGI_10026207;
	scaffold1154	WUBlastX	LINE_Penelope	1115898	1116158	43	+	.	.
scaffold1154	subtractBed	intrn	1136307	1136346	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1136307	1136346	53	+	.	.
scaffold1154	subtractBed	intrn	1137633	1137662	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1137633	1137662	60	+	.	.
scaffold1154	subtractBed	intrn	1137689	1138032	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1137689	1138032	373	+	.	.
scaffold1154	subtractBed	intrn	1137682	1138052	.	-	.	Parent=CGI_10026207;
	scaffold1154	TRF	Tandem_Repeat	1137682	1138052	388	+	.	.
scaffold1155	subtractBed	intrn	5093	5137	.	+	.	Parent=CGI_10007788;
	scaffold1155	TRF	Tandem_Repeat	5093	5137	81	+	.	.
scaffold1155	subtractBed	intrn	17336	17402	.	-	.	Parent=CGI_10007790;
	scaffold1155	TRF	Tandem_Repeat	17336	17402	134	+	.	.
scaffold1155	subtractBed	intrn	30239	30309	.	-	.	Parent=CGI_10007791;
	scaffold1155	TRF	Tandem_Repeat	30239	30309	115	+	.	.
scaffold1155	subtractBed	intrn	30239	30309	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	30239	30309	115	+	.	.
scaffold1155	subtractBed	intrn	36401	36538	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	36401	36538	66	+	.	.
scaffold1155	subtractBed	intrn	42945	43006	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	42945	43006	124	+	.	.
scaffold1155	subtractBed	intrn	44160	45286	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	44160	45286	1670	+	.	.
scaffold1155	subtractBed	intrn	54526	54583	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	54526	54583	91	+	.	.
scaffold1155	subtractBed	intrn	54526	54583	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	54526	54583	73	+	.	.
scaffold1155	subtractBed	intrn	54538	54583	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	54538	54583	65	+	.	.
scaffold1155	subtractBed	intrn	57046	57116	.	+	.	Parent=CGI_10007792;
	scaffold1155	TRF	Tandem_Repeat	57046	57116	142	+	.	.
scaffold1155	subtractBed	intrn	183540	183689	.	+	.	Parent=CGI_10007798;
	scaffold1155	WUBlastX	LTR_Gypsy	183540	183689	26	+	.	.
scaffold1157	subtractBed	intrn	76794	77207	.	-	.	Parent=CGI_10011210;
	scaffold1157	TRF	Tandem_Repeat	76794	77216	605	+	.	.
scaffold1157	subtractBed	intrn	78981	79022	.	-	.	Parent=CGI_10011210;
	scaffold1157	TRF	Tandem_Repeat	78981	79022	84	+	.	.
scaffold1157	subtractBed	intrn	93318	93349	.	+	.	Parent=CGI_10011212;
	scaffold1157	TRF	Tandem_Repeat	93318	93349	64	+	.	.
scaffold1157	subtractBed	intrn	93882	93921	.	+	.	Parent=CGI_10011212;
	scaffold1157	TRF	Tandem_Repeat	93882	93921	71	+	.	.
scaffold1157	subtractBed	intrn	99563	99611	.	+	.	Parent=CGI_10011212;
	scaffold1157	TRF	Tandem_Repeat	99563	99611	59	+	.	.
scaffold1157	subtractBed	intrn	112420	112529	.	+	.	Parent=CGI_10011212;
	scaffold1157	TRF	Tandem_Repeat	112420	112529	170	+	.	.
scaffold1157	subtractBed	intrn	120082	120200	.	+	.	Parent=CGI_10011212;
	scaffold1157	TRF	Tandem_Repeat	120082	120200	125	+	.	.
scaffold1157	subtractBed	intrn	198235	198272	.	+	.	Parent=CGI_10011218;
	scaffold1157	TRF	Tandem_Repeat	198235	198272	76	+	.	.
scaffold1157	subtractBed	intrn	198302	198345	.	+	.	Parent=CGI_10011218;
	scaffold1157	TRF	Tandem_Repeat	198302	198345	88	+	.	.
scaffold1157	subtractBed	intrn	213762	213811	.	-	.	Parent=CGI_10011221;
	scaffold1157	TRF	Tandem_Repeat	213762	213811	100	+	.	.
scaffold1157	subtractBed	intrn	216512	217384	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_L2	216512	217384	403	-	.	.
scaffold1157	subtractBed	intrn	224869	224901	.	-	.	Parent=CGI_10011221;
	scaffold1157	TRF	Tandem_Repeat	224869	224901	66	+	.	.
scaffold1157	subtractBed	intrn	228112	228279	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_CR1-L2	228112	228279	44	-	.	.
scaffold1157	subtractBed	intrn	229176	229319	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_L2	229176	229319	29	-	.	.
scaffold1157	subtractBed	intrn	228982	229176	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_CR1	228982	229176	80	-	.	.
scaffold1157	subtractBed	intrn	229084	229206	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_L2	229084	229206	46	-	.	.
scaffold1157	subtractBed	intrn	228771	228902	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_L2	228771	228902	39	-	.	.
scaffold1157	subtractBed	intrn	228919	229182	.	-	.	Parent=CGI_10011221;
	scaffold1157	WUBlastX	LINE_L2	228919	229182	34	-	.	.
scaffold1157	subtractBed	intrn	232369	232429	.	-	.	Parent=CGI_10011221;
	scaffold1157	TRF	Tandem_Repeat	232369	232429	122	+	.	.
scaffold1157	subtractBed	intrn	247002	247059	.	-	.	Parent=CGI_10011222;
	scaffold1157	TRF	Tandem_Repeat	247002	247059	80	+	.	.
scaffold1157	subtractBed	intrn	252376	252430	.	-	.	Parent=CGI_10011222;
	scaffold1157	TRF	Tandem_Repeat	252376	252430	51	+	.	.
scaffold1157	subtractBed	intrn	252447	252484	.	-	.	Parent=CGI_10011222;
	scaffold1157	TRF	Tandem_Repeat	252447	252484	51	+	.	.
scaffold1157	subtractBed	intrn	252447	252489	.	-	.	Parent=CGI_10011222;
	scaffold1157	TRF	Tandem_Repeat	252447	252489	50	+	.	.
scaffold1159	subtractBed	intrn	97267	97621	.	+	.	Parent=CGI_10007975;
	scaffold1159	TRF	Tandem_Repeat	97267	97621	379	+	.	.
scaffold1159	subtractBed	intrn	100465	100888	.	+	.	Parent=CGI_10007975;
	scaffold1159	TRF	Tandem_Repeat	100465	100888	453	+	.	.
scaffold1159	subtractBed	intrn	100515	100888	.	+	.	Parent=CGI_10007975;
	scaffold1159	TRF	Tandem_Repeat	100515	100888	565	+	.	.
scaffold1159	subtractBed	intrn	109423	111683	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	109423	111683	2651	+	.	.
scaffold1159	subtractBed	intrn	109423	111683	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	109423	111683	2973	+	.	.
scaffold1159	subtractBed	intrn	109423	111683	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	109423	111683	2991	+	.	.
scaffold1159	subtractBed	intrn	112998	113937	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	112998	113937	1137	+	.	.
scaffold1159	subtractBed	intrn	112997	113937	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	112997	113937	1248	+	.	.
scaffold1159	subtractBed	intrn	118395	118942	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	118395	118942	690	+	.	.
scaffold1159	subtractBed	intrn	122952	123249	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	122927	123249	290	+	.	.
scaffold1159	subtractBed	intrn	124065	124977	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	124065	124977	512	+	.	.
scaffold1159	subtractBed	intrn	125181	126173	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	125181	126173	1415	+	.	.
scaffold1159	subtractBed	intrn	126240	126707	.	-	.	Parent=CGI_10007976;
	scaffold1159	TRF	Tandem_Repeat	126240	126717	282	+	.	.
scaffold1159	subtractBed	intrn	150528	151759	.	+	.	Parent=CGI_10007977;
	scaffold1159	TRF	Tandem_Repeat	150528	151759	1764	+	.	.
scaffold1159	subtractBed	intrn	155813	156008	.	+	.	Parent=CGI_10007977;
	scaffold1159	TRF	Tandem_Repeat	155813	156008	338	+	.	.
scaffold1159	subtractBed	intrn	159431	159460	.	+	.	Parent=CGI_10007977;
	scaffold1159	TRF	Tandem_Repeat	159431	159460	60	+	.	.
scaffold1159	subtractBed	intrn	160374	160580	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_CR1	160374	160580	33	+	.	.
scaffold1159	subtractBed	intrn	161360	161767	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	161360	161767	82	+	.	.
scaffold1159	subtractBed	intrn	160407	160583	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	160407	160583	60	+	.	.
scaffold1159	subtractBed	intrn	160410	160634	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	160410	160634	35	+	.	.
scaffold1159	subtractBed	intrn	161555	161818	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	161555	161818	91	+	.	.
scaffold1159	subtractBed	intrn	161555	161920	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	161555	161920	54	+	.	.
scaffold1159	subtractBed	intrn	160930	161028	.	+	.	Parent=CGI_10007977;
	scaffold1159	WUBlastX	LINE_L2	160930	161028	24	+	.	.
scaffold116	subtractBed	intrn	13481	13532	.	+	.	Parent=CGI_10009408;
	scaffold116	TRF	Tandem_Repeat	13481	13532	59	+	.	.
scaffold116	subtractBed	intrn	133523	133587	.	+	.	Parent=CGI_10009417;
	scaffold116	TRF	Tandem_Repeat	133523	133587	85	+	.	.
scaffold116	subtractBed	intrn	175307	175361	.	+	.	Parent=CGI_10009420;
	scaffold116	TRF	Tandem_Repeat	175307	175361	85	+	.	.
scaffold116	subtractBed	intrn	178022	178285	.	+	.	Parent=CGI_10009420;
	scaffold116	TRF	Tandem_Repeat	178022	178285	395	+	.	.
scaffold116	subtractBed	intrn	200069	201417	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	200069	201417	644	+	.	.
scaffold116	subtractBed	intrn	200083	200998	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	200083	200998	258	+	.	.
scaffold116	subtractBed	intrn	200227	200699	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	200227	200699	389	+	.	.
scaffold116	subtractBed	intrn	204004	204162	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	204004	204162	282	+	.	.
scaffold116	subtractBed	intrn	205781	206215	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	205781	206215	692	+	.	.
scaffold116	subtractBed	intrn	212496	212747	.	-	.	Parent=CGI_10009421;
	scaffold116	WUBlastX	LINE_RTE-X	212496	212747	109	+	.	.
scaffold116	subtractBed	intrn	212216	212386	.	-	.	Parent=CGI_10009421;
	scaffold116	WUBlastX	LINE_RTE-X	212216	212386	39	+	.	.
scaffold116	subtractBed	intrn	212328	212651	.	-	.	Parent=CGI_10009421;
	scaffold116	WUBlastX	LINE_RTE-X	212328	212651	68	+	.	.
scaffold116	subtractBed	intrn	212436	212777	.	-	.	Parent=CGI_10009421;
	scaffold116	WUBlastX	LINE_RTE-X	212436	212777	102	+	.	.
scaffold116	subtractBed	intrn	215975	216524	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	215975	216524	469	+	.	.
scaffold116	subtractBed	intrn	215975	216524	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	215975	216524	482	+	.	.
scaffold116	subtractBed	intrn	215975	216457	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	215975	216457	462	+	.	.
scaffold116	subtractBed	intrn	216479	216560	.	-	.	Parent=CGI_10009421;
	scaffold116	TRF	Tandem_Repeat	216479	216560	92	+	.	.
scaffold1160	subtractBed	intrn	31182	31234	.	+	.	Parent=CGI_10015341;
	scaffold1160	TRF	Tandem_Repeat	31182	31234	61	+	.	.
scaffold1160	subtractBed	intrn	31182	31234	.	+	.	Parent=CGI_10015341;
	scaffold1160	TRF	Tandem_Repeat	31182	31234	61	+	.	.
scaffold1160	subtractBed	intrn	56257	56413	.	+	.	Parent=CGI_10015344;
	scaffold1160	TRF	Tandem_Repeat	56257	56413	269	+	.	.
scaffold1160	subtractBed	intrn	56271	56349	.	+	.	Parent=CGI_10015344;
	scaffold1160	TRF	Tandem_Repeat	56271	56349	50	+	.	.
scaffold1160	subtractBed	intrn	120703	120933	.	-	.	Parent=CGI_10015349;
	scaffold1160	WUBlastX	DNA_hAT-Blackja	120703	120933	28	+	.	.
scaffold1160	subtractBed	intrn	240137	240319	.	-	.	Parent=CGI_10015352;
	scaffold1160	TRF	Tandem_Repeat	240137	240319	233	+	.	.
scaffold1160	subtractBed	intrn	260141	260968	.	-	.	Parent=CGI_10015353;
	scaffold1160	WUBlastX	LINE_RTE-X	260141	260968	91	+	.	.
scaffold1160	subtractBed	intrn	260129	260698	.	-	.	Parent=CGI_10015353;
	scaffold1160	WUBlastX	LINE_RTE-X	260129	260698	133	+	.	.
scaffold1160	subtractBed	intrn	263297	263355	.	-	.	Parent=CGI_10015353;
	scaffold1160	TRF	Tandem_Repeat	263297	263355	118	+	.	.
scaffold1160	subtractBed	intrn	262210	262947	.	-	.	Parent=CGI_10015353;
	scaffold1160	WUBlastX	LINE_RTE-X	262210	262947	131	+	.	.
scaffold1160	subtractBed	intrn	285816	285878	.	-	.	Parent=CGI_10015355;
	scaffold1160	TRF	Tandem_Repeat	285816	285878	126	+	.	.
scaffold1160	subtractBed	intrn	353030	353074	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	353030	353074	90	+	.	.
scaffold1160	subtractBed	intrn	361213	363072	.	+	.	Parent=CGI_10015360;
	scaffold1160	WUBlastX	DNA_Sola	361213	363072	571	-	.	.
scaffold1160	subtractBed	intrn	371134	371175	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	371134	371175	57	+	.	.
scaffold1160	subtractBed	intrn	379454	379519	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	379454	379519	51	+	.	.
scaffold1160	subtractBed	intrn	381290	381353	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	381290	381353	65	+	.	.
scaffold1160	subtractBed	intrn	381304	381350	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	381304	381350	58	+	.	.
scaffold1160	subtractBed	intrn	381530	381615	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	381530	381615	82	+	.	.
scaffold1160	subtractBed	intrn	381530	381626	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	381530	381626	68	+	.	.
scaffold1160	subtractBed	intrn	382140	382175	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	382140	382175	72	+	.	.
scaffold1160	subtractBed	intrn	388408	388441	.	+	.	Parent=CGI_10015360;
	scaffold1160	TRF	Tandem_Repeat	388408	388441	68	+	.	.
scaffold1161	subtractBed	intrn	9384	9425	.	+	.	Parent=CGI_10002995;
	scaffold1161	TRF	Tandem_Repeat	9384	9425	75	+	.	.
scaffold1161	subtractBed	intrn	10189	10237	.	+	.	Parent=CGI_10002995;
	scaffold1161	TRF	Tandem_Repeat	10189	10237	98	+	.	.
scaffold1163	subtractBed	intrn	88539	88713	.	+	.	Parent=CGI_10009339;
	scaffold1163	TRF	Tandem_Repeat	88539	88713	194	+	.	.
scaffold1163	subtractBed	intrn	91887	92145	.	-	.	Parent=CGI_10009340;
	scaffold1163	TRF	Tandem_Repeat	91769	92145	532	+	.	.
scaffold1163	subtractBed	intrn	91887	92074	.	-	.	Parent=CGI_10009340;
	scaffold1163	TRF	Tandem_Repeat	91856	92074	74	+	.	.
scaffold1163	subtractBed	intrn	129760	130100	.	-	.	Parent=CGI_10009343;
	scaffold1163	TRF	Tandem_Repeat	129760	130100	343	+	.	.
scaffold1163	subtractBed	intrn	129760	130121	.	-	.	Parent=CGI_10009343;
	scaffold1163	TRF	Tandem_Repeat	129760	130121	370	+	.	.
scaffold1163	subtractBed	intrn	131466	131807	.	-	.	Parent=CGI_10009343;
	scaffold1163	TRF	Tandem_Repeat	131466	131807	461	+	.	.
scaffold1163	subtractBed	intrn	134051	134498	.	-	.	Parent=CGI_10009343;
	scaffold1163	TRF	Tandem_Repeat	134051	134498	717	+	.	.
scaffold1163	subtractBed	intrn	141255	141450	.	+	.	Parent=CGI_10009344;
	scaffold1163	TRF	Tandem_Repeat	141255	141450	329	+	.	.
scaffold1163	subtractBed	intrn	147752	147801	.	-	.	Parent=CGI_10009345;
	scaffold1163	TRF	Tandem_Repeat	147752	147801	100	+	.	.
scaffold1163	subtractBed	intrn	147825	147878	.	-	.	Parent=CGI_10009345;
	scaffold1163	TRF	Tandem_Repeat	147825	147878	54	+	.	.
scaffold1163	subtractBed	intrn	149637	151815	.	-	.	Parent=CGI_10009345;
	scaffold1163	TRF	Tandem_Repeat	149637	151841	3104	+	.	.
scaffold1163	subtractBed	intrn	149637	151815	.	+	.	Parent=CGI_10009346;
	scaffold1163	TRF	Tandem_Repeat	149637	151841	3104	+	.	.
scaffold1163	subtractBed	intrn	170967	171000	.	-	.	Parent=CGI_10009349;
	scaffold1163	TRF	Tandem_Repeat	170967	171000	68	+	.	.
scaffold1163	subtractBed	intrn	172083	172125	.	-	.	Parent=CGI_10009349;
	scaffold1163	TRF	Tandem_Repeat	172083	172125	86	+	.	.
scaffold1163	subtractBed	intrn	187014	187044	.	-	.	Parent=CGI_10009351;
	scaffold1163	TRF	Tandem_Repeat	187014	187044	62	+	.	.
scaffold1163	subtractBed	intrn	187775	187820	.	-	.	Parent=CGI_10009351;
	scaffold1163	TRF	Tandem_Repeat	187775	187820	76	+	.	.
scaffold1163	subtractBed	intrn	188657	189190	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_L1	188657	189190	105	+	.	.
scaffold1163	subtractBed	intrn	188744	189298	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_L1-Tx1	188744	189298	397	+	.	.
scaffold1163	subtractBed	intrn	189235	191037	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_L1-Tx1	189235	191037	549	+	.	.
scaffold1163	subtractBed	intrn	199861	199898	.	-	.	Parent=CGI_10009351;
	scaffold1163	TRF	Tandem_Repeat	199861	199898	76	+	.	.
scaffold1163	subtractBed	intrn	202986	203770	.	-	.	Parent=CGI_10009351;
	scaffold1163	TRF	Tandem_Repeat	202986	203770	843	+	.	.
scaffold1163	subtractBed	intrn	200485	200787	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_RTE-BovB	200485	200787	21	+	.	.
scaffold1163	subtractBed	intrn	200150	200284	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_RTE-BovB	200150	200284	28	+	.	.
scaffold1163	subtractBed	intrn	198290	198580	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_RTE-X	198290	198580	93	-	.	.
scaffold1163	subtractBed	intrn	198389	198616	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_RTE-X	198389	198616	43	-	.	.
scaffold1163	subtractBed	intrn	198380	198577	.	-	.	Parent=CGI_10009351;
	scaffold1163	WUBlastX	LINE_RTE-X	198380	198577	129	-	.	.
scaffold1163	subtractBed	intrn	216573	216610	.	-	.	Parent=CGI_10009352;
	scaffold1163	TRF	Tandem_Repeat	216573	216610	76	+	.	.
scaffold1164	subtractBed	intrn	23546	23582	.	-	.	Parent=CGI_10012997;
	scaffold1164	TRF	Tandem_Repeat	23546	23582	74	+	.	.
scaffold1164	subtractBed	intrn	31106	31139	.	-	.	Parent=CGI_10012997;
	scaffold1164	TRF	Tandem_Repeat	31106	31139	68	+	.	.
scaffold1164	subtractBed	intrn	31340	31952	.	-	.	Parent=CGI_10012997;
	scaffold1164	TRF	Tandem_Repeat	31340	31952	978	+	.	.
scaffold1164	subtractBed	intrn	32444	32875	.	-	.	Parent=CGI_10012997;
	scaffold1164	TRF	Tandem_Repeat	32444	32875	686	+	.	.
scaffold1164	subtractBed	intrn	45208	45318	.	+	.	Parent=CGI_10012998;
	scaffold1164	TRF	Tandem_Repeat	45208	45318	213	+	.	.
scaffold1164	subtractBed	intrn	97796	97839	.	-	.	Parent=CGI_10013000;
	scaffold1164	TRF	Tandem_Repeat	97796	97839	88	+	.	.
scaffold1164	subtractBed	intrn	112165	112206	.	-	.	Parent=CGI_10013001;
	scaffold1164	TRF	Tandem_Repeat	112165	112206	84	+	.	.
scaffold1164	subtractBed	intrn	114499	114570	.	-	.	Parent=CGI_10013001;
	scaffold1164	TRF	Tandem_Repeat	114499	114570	144	+	.	.
scaffold1164	subtractBed	intrn	158491	158941	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	158491	158941	434	+	.	.
scaffold1164	subtractBed	intrn	158451	158827	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	158451	158827	410	+	.	.
scaffold1164	subtractBed	intrn	158474	158941	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	158474	158941	611	+	.	.
scaffold1164	subtractBed	intrn	158583	158939	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	158583	158939	122	+	.	.
scaffold1164	subtractBed	intrn	158583	158939	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	158583	158939	335	+	.	.
scaffold1164	subtractBed	intrn	169886	170688	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	169886	170688	1170	+	.	.
scaffold1164	subtractBed	intrn	175224	175264	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	175224	175264	66	+	.	.
scaffold1164	subtractBed	intrn	180424	180494	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	180424	180494	88	+	.	.
scaffold1164	subtractBed	intrn	180424	180509	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	180424	180509	131	+	.	.
scaffold1164	subtractBed	intrn	180749	180786	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	180749	180786	76	+	.	.
scaffold1164	subtractBed	intrn	181220	181282	.	+	.	Parent=CGI_10013004;
	scaffold1164	TRF	Tandem_Repeat	181220	181282	65	+	.	.
scaffold1164	subtractBed	intrn	244635	244671	.	+	.	Parent=CGI_10013007;
	scaffold1164	TRF	Tandem_Repeat	244635	244671	65	+	.	.
scaffold1164	subtractBed	intrn	262473	262524	.	-	.	Parent=CGI_10013008;
	scaffold1164	TRF	Tandem_Repeat	262473	262524	50	+	.	.
scaffold1164	subtractBed	intrn	262473	262524	.	-	.	Parent=CGI_10013008;
	scaffold1164	TRF	Tandem_Repeat	262473	262524	68	+	.	.
scaffold1164	subtractBed	intrn	297233	297667	.	-	.	Parent=CGI_10013010;
	scaffold1164	TRF	Tandem_Repeat	297233	297667	564	+	.	.
scaffold1164	subtractBed	intrn	308176	308253	.	-	.	Parent=CGI_10013011;
	scaffold1164	TRF	Tandem_Repeat	308176	308253	149	+	.	.
scaffold1164	subtractBed	intrn	309294	309713	.	-	.	Parent=CGI_10013011;
	scaffold1164	WUBlastX	LINE_L1	309294	309713	56	-	.	.
scaffold1164	subtractBed	intrn	309381	309737	.	-	.	Parent=CGI_10013011;
	scaffold1164	WUBlastX	LINE_L1-Tx1	309381	309737	67	-	.	.
scaffold1164	subtractBed	intrn	309381	309674	.	-	.	Parent=CGI_10013011;
	scaffold1164	WUBlastX	LINE_L1-Tx1	309381	309674	97	-	.	.
scaffold1164	subtractBed	intrn	309378	309803	.	-	.	Parent=CGI_10013011;
	scaffold1164	WUBlastX	LINE_L1	309378	309803	23	-	.	.
scaffold1164	subtractBed	intrn	325085	325132	.	-	.	Parent=CGI_10013012;
	scaffold1164	TRF	Tandem_Repeat	325085	325132	69	+	.	.
scaffold1166	subtractBed	intrn	9942	9988	.	+	.	Parent=CGI_10006284;
	scaffold1166	TRF	Tandem_Repeat	9942	9988	85	+	.	.
scaffold1166	subtractBed	intrn	13547	14914	.	+	.	Parent=CGI_10006284;
	scaffold1166	WUBlastX	LINE_RTE-X	13547	14914	401	-	.	.
scaffold1166	subtractBed	intrn	13288	13353	.	+	.	Parent=CGI_10006284;
	scaffold1166	WUBlastX	LINE_CR1	13288	13353	23	-	.	.
scaffold1166	subtractBed	intrn	23465	23516	.	+	.	Parent=CGI_10006285;
	scaffold1166	TRF	Tandem_Repeat	23465	23516	88	+	.	.
scaffold117	subtractBed	intrn	29826	29875	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	29826	29875	100	+	.	.
scaffold117	subtractBed	intrn	28262	28414	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	28262	28414	20	+	.	.
scaffold117	subtractBed	intrn	28396	28626	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	28396	28626	23	+	.	.
scaffold117	subtractBed	intrn	34054	34107	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	34054	34107	108	+	.	.
scaffold117	subtractBed	intrn	46830	46921	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	46830	46921	66	+	.	.
scaffold117	subtractBed	intrn	37096	37284	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	DNA_Harbinger	37096	37284	26	-	.	.
scaffold117	subtractBed	intrn	37174	37359	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	DNA_Harbinger	37174	37359	70	-	.	.
scaffold117	subtractBed	intrn	36689	37099	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	DNA_Harbinger	36689	37099	202	-	.	.
scaffold117	subtractBed	intrn	37591	37782	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	DNA_Harbinger	37591	37782	44	-	.	.
scaffold117	subtractBed	intrn	53134	53238	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53134	53238	53	+	.	.
scaffold117	subtractBed	intrn	53849	53989	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53849	53989	115	+	.	.
scaffold117	subtractBed	intrn	53753	53992	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53753	53992	93	+	.	.
scaffold117	subtractBed	intrn	53394	53564	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	53394	53564	21	+	.	.
scaffold117	subtractBed	intrn	53122	53256	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53122	53256	49	+	.	.
scaffold117	subtractBed	intrn	53831	54082	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53831	54082	105	+	.	.
scaffold117	subtractBed	intrn	51521	52066	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	51521	52066	35	+	.	.
scaffold117	subtractBed	intrn	51614	52027	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	51614	52027	217	+	.	.
scaffold117	subtractBed	intrn	52014	52403	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	52014	52403	176	+	.	.
scaffold117	subtractBed	intrn	53134	53319	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53134	53319	45	+	.	.
scaffold117	subtractBed	intrn	53687	53989	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	53687	53989	75	+	.	.
scaffold117	subtractBed	intrn	53615	53998	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	53615	53998	57	+	.	.
scaffold117	subtractBed	intrn	51710	52060	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	51710	52060	253	+	.	.
scaffold117	subtractBed	intrn	53292	53525	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_L2	53292	53525	32	+	.	.
scaffold117	subtractBed	intrn	53825	53983	.	+	.	Parent=CGI_10016953;
	scaffold117	WUBlastX	LINE_CR1	53825	53983	113	+	.	.
scaffold117	subtractBed	intrn	59363	60043	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	59363	60043	853	+	.	.
scaffold117	subtractBed	intrn	61227	61956	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	61227	61956	1016	+	.	.
scaffold117	subtractBed	intrn	61252	61953	.	+	.	Parent=CGI_10016953;
	scaffold117	TRF	Tandem_Repeat	61252	61953	1122	+	.	.
scaffold117	subtractBed	intrn	73091	74262	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	73091	74262	1720	+	.	.
scaffold117	subtractBed	intrn	75152	75249	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	75152	75249	81	+	.	.
scaffold117	subtractBed	intrn	75152	75250	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	75152	75250	92	+	.	.
scaffold117	subtractBed	intrn	77739	78340	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	77739	78340	1057	+	.	.
scaffold117	subtractBed	intrn	78856	78907	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	78856	78907	104	+	.	.
scaffold117	subtractBed	intrn	81830	82242	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	81830	82242	266	+	.	.
scaffold117	subtractBed	intrn	85906	85944	.	+	.	Parent=CGI_10016954;
	scaffold117	TRF	Tandem_Repeat	85906	85944	62	+	.	.
scaffold117	subtractBed	intrn	95290	95343	.	+	.	Parent=CGI_10016955;
	scaffold117	TRF	Tandem_Repeat	95290	95343	72	+	.	.
scaffold117	subtractBed	intrn	95286	95343	.	+	.	Parent=CGI_10016955;
	scaffold117	TRF	Tandem_Repeat	95286	95343	80	+	.	.
scaffold117	subtractBed	intrn	217645	217688	.	+	.	Parent=CGI_10016959;
	scaffold117	TRF	Tandem_Repeat	217645	217688	88	+	.	.
scaffold117	subtractBed	intrn	238221	238263	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	238221	238263	86	+	.	.
scaffold117	subtractBed	intrn	238686	238734	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	238686	238734	55	+	.	.
scaffold117	subtractBed	intrn	242386	242445	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	242386	242445	57	+	.	.
scaffold117	subtractBed	intrn	242382	242444	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	242382	242444	81	+	.	.
scaffold117	subtractBed	intrn	242379	242444	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	242379	242444	51	+	.	.
scaffold117	subtractBed	intrn	242379	242444	.	+	.	Parent=CGI_10016961;
	scaffold117	TRF	Tandem_Repeat	242379	242444	87	+	.	.
scaffold117	subtractBed	intrn	245003	245308	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	245003	245308	144	+	.	.
scaffold117	subtractBed	intrn	245737	245979	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	245737	245979	136	+	.	.
scaffold117	subtractBed	intrn	246458	246673	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	246458	246673	62	+	.	.
scaffold117	subtractBed	intrn	247701	247835	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	247701	247835	33	-	.	.
scaffold117	subtractBed	intrn	246977	247213	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	246977	247213	72	+	.	.
scaffold117	subtractBed	intrn	247390	247662	.	+	.	Parent=CGI_10016961;
	scaffold117	WUBlastX	DNA_Kolobok	247390	247662	81	-	.	.
scaffold117	subtractBed	intrn	238221	238263	.	-	.	Parent=CGI_10016962;
	scaffold117	TRF	Tandem_Repeat	238221	238263	86	+	.	.
scaffold117	subtractBed	intrn	238686	238734	.	-	.	Parent=CGI_10016962;
	scaffold117	TRF	Tandem_Repeat	238686	238734	55	+	.	.
scaffold117	subtractBed	intrn	279237	279407	.	-	.	Parent=CGI_10016963;
	scaffold117	WUBlastX	DNA_TcMar-Tc2	279237	279407	65	-	.	.
scaffold117	subtractBed	intrn	279782	279811	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	279782	279811	60	+	.	.
scaffold117	subtractBed	intrn	283406	283445	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	283406	283445	53	+	.	.
scaffold117	subtractBed	intrn	284123	285018	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	284123	285018	1002	+	.	.
scaffold117	subtractBed	intrn	284123	285018	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	284123	285018	1109	+	.	.
scaffold117	subtractBed	intrn	287866	287970	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	287866	287970	63	+	.	.
scaffold117	subtractBed	intrn	288291	288334	.	-	.	Parent=CGI_10016963;
	scaffold117	TRF	Tandem_Repeat	288291	288334	88	+	.	.
scaffold117	subtractBed	intrn	355991	356095	.	-	.	Parent=CGI_10016967;
	scaffold117	WUBlastX	DNA_TcMar-Tc1	355991	356095	53	+	.	.
scaffold117	subtractBed	intrn	382852	383388	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	382852	383589	32	+	.	.
scaffold117	subtractBed	intrn	382816	383238	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	382816	383238	100	+	.	.
scaffold117	subtractBed	intrn	381940	382479	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy-Cigr	381940	382479	174	+	.	.
scaffold117	subtractBed	intrn	381802	382515	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	381802	382515	48	+	.	.
scaffold117	subtractBed	intrn	382663	383148	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	382663	383148	80	+	.	.
scaffold117	subtractBed	intrn	381961	382707	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	381961	382707	102	+	.	.
scaffold117	subtractBed	intrn	382840	383316	.	+	.	Parent=CGI_10016969;
	scaffold117	WUBlastX	LTR_Gypsy	382840	383316	55	+	.	.
scaffold117	subtractBed	intrn	421182	421545	.	-	.	Parent=CGI_10016972;
	scaffold117	TRF	Tandem_Repeat	421182	421549	404	+	.	.
scaffold117	subtractBed	intrn	443246	443453	.	+	.	Parent=CGI_10016974;
	scaffold117	TRF	Tandem_Repeat	443246	443453	346	+	.	.
scaffold117	subtractBed	intrn	461391	461440	.	+	.	Parent=CGI_10016975;
	scaffold117	TRF	Tandem_Repeat	461391	461440	100	+	.	.
scaffold1171	subtractBed	intrn	12481	12726	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1-Tx1	12481	12726	98	+	.	.
scaffold1171	subtractBed	intrn	13832	15685	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1-Tx1	13832	15685	351	+	.	.
scaffold1171	subtractBed	intrn	12753	14243	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1	12753	14243	296	+	.	.
scaffold1171	subtractBed	intrn	12442	12699	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1-Tx1	12442	12699	58	+	.	.
scaffold1171	subtractBed	intrn	16286	16510	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1-Tx1	16286	16510	23	+	.	.
scaffold1171	subtractBed	intrn	16322	16627	.	+	.	Parent=CGI_10002857;
	scaffold1171	WUBlastX	LINE_L1-Tx1	16322	16627	47	+	.	.
scaffold1172	subtractBed	intrn	48057	48134	.	-	.	Parent=CGI_10006905;
	scaffold1172	TRF	Tandem_Repeat	48057	48134	113	+	.	.
scaffold1172	subtractBed	intrn	67175	67213	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	67175	67213	51	+	.	.
scaffold1172	subtractBed	intrn	67761	67793	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	67761	67793	66	+	.	.
scaffold1172	subtractBed	intrn	70790	71342	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	70765	71342	696	+	.	.
scaffold1172	subtractBed	intrn	72739	72763	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	72739	72763	50	+	.	.
scaffold1172	subtractBed	intrn	73209	73976	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	73209	73976	1335	+	.	.
scaffold1172	subtractBed	intrn	74146	74187	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	74146	74187	56	+	.	.
scaffold1172	subtractBed	intrn	74305	74720	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	74305	74752	772	+	.	.
scaffold1172	subtractBed	intrn	76250	76426	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	76250	76426	95	+	.	.
scaffold1172	subtractBed	intrn	77588	77629	.	-	.	Parent=CGI_10006907;
	scaffold1172	TRF	Tandem_Repeat	77588	77629	84	+	.	.
scaffold1172	subtractBed	intrn	85540	85635	.	+	.	Parent=CGI_10006908;
	scaffold1172	TRF	Tandem_Repeat	85540	85635	113	+	.	.
scaffold1172	subtractBed	intrn	87822	87913	.	+	.	Parent=CGI_10006908;
	scaffold1172	TRF	Tandem_Repeat	87822	87913	139	+	.	.
scaffold1172	subtractBed	intrn	95595	95677	.	+	.	Parent=CGI_10006908;
	scaffold1172	TRF	Tandem_Repeat	95595	95677	96	+	.	.
scaffold1172	subtractBed	intrn	95600	95672	.	+	.	Parent=CGI_10006908;
	scaffold1172	TRF	Tandem_Repeat	95600	95672	98	+	.	.
scaffold1172	subtractBed	intrn	135381	135518	.	+	.	Parent=CGI_10006909;
	scaffold1172	WUBlastX	DNA_Kolobok	135381	135518	73	+	.	.
scaffold1172	subtractBed	intrn	135333	135521	.	+	.	Parent=CGI_10006909;
	scaffold1172	WUBlastX	DNA_Kolobok	135333	135521	45	+	.	.
scaffold1172	subtractBed	intrn	134147	134389	.	+	.	Parent=CGI_10006909;
	scaffold1172	WUBlastX	DNA_Kolobok	134147	134389	89	+	.	.
scaffold1172	subtractBed	intrn	136337	136357	.	+	.	Parent=CGI_10006909;
	scaffold1172	WUBlastX	DNA_Kolobok	136337	136528	68	-	.	.
scaffold1172	subtractBed	intrn	136544	136552	.	+	.	Parent=CGI_10006909;
	scaffold1172	WUBlastX	DNA_Kolobok	136367	136552	85	-	.	.
scaffold1172	subtractBed	intrn	139394	139451	.	+	.	Parent=CGI_10006909;
	scaffold1172	TRF	Tandem_Repeat	139394	139451	116	+	.	.
scaffold1172	subtractBed	intrn	143064	143109	.	+	.	Parent=CGI_10006909;
	scaffold1172	TRF	Tandem_Repeat	143064	143109	92	+	.	.
scaffold1172	subtractBed	intrn	136544	136552	.	-	.	Parent=CGI_10006910;
	scaffold1172	WUBlastX	DNA_Kolobok	136367	136552	85	-	.	.
scaffold1173	subtractBed	intrn	17419	17509	.	+	.	Parent=CGI_10005744;
	scaffold1173	TRF	Tandem_Repeat	17419	17509	164	+	.	.
scaffold1173	subtractBed	intrn	19128	19177	.	+	.	Parent=CGI_10005744;
	scaffold1173	TRF	Tandem_Repeat	19128	19177	75	+	.	.
scaffold1173	subtractBed	intrn	19560	19603	.	+	.	Parent=CGI_10005744;
	scaffold1173	TRF	Tandem_Repeat	19560	19603	88	+	.	.
scaffold1173	subtractBed	intrn	21038	21102	.	+	.	Parent=CGI_10005744;
	scaffold1173	TRF	Tandem_Repeat	21038	21102	121	+	.	.
scaffold1173	subtractBed	intrn	67037	67091	.	+	.	Parent=CGI_10005745;
	scaffold1173	TRF	Tandem_Repeat	67037	67091	65	+	.	.
scaffold1173	subtractBed	intrn	67033	67088	.	+	.	Parent=CGI_10005745;
	scaffold1173	TRF	Tandem_Repeat	67033	67088	71	+	.	.
scaffold1173	subtractBed	intrn	68376	69146	.	+	.	Parent=CGI_10005745;
	scaffold1173	WUBlastX	DNA_TcMar-m44	68376	69146	453	+	.	.
scaffold1173	subtractBed	intrn	69460	69464	.	+	.	Parent=CGI_10005745;
	scaffold1173	WUBlastX	DNA_TcMar-m44	69460	69720	77	+	.	.
scaffold1173	subtractBed	intrn	69445	69464	.	+	.	Parent=CGI_10005745;
	scaffold1173	WUBlastX	DNA_TcMar-m44	69445	69603	78	+	.	.
scaffold1173	subtractBed	intrn	85326	85381	.	+	.	Parent=CGI_10005746;
	scaffold1173	TRF	Tandem_Repeat	85326	85381	58	+	.	.
scaffold1173	subtractBed	intrn	85326	85383	.	+	.	Parent=CGI_10005746;
	scaffold1173	TRF	Tandem_Repeat	85326	85383	64	+	.	.
scaffold1173	subtractBed	intrn	87709	87751	.	+	.	Parent=CGI_10005746;
	scaffold1173	TRF	Tandem_Repeat	87709	87751	86	+	.	.
scaffold1173	subtractBed	intrn	87709	87751	.	-	.	Parent=CGI_10005747;
	scaffold1173	TRF	Tandem_Repeat	87709	87751	86	+	.	.
scaffold1173	subtractBed	intrn	92786	92890	.	-	.	Parent=CGI_10005747;
	scaffold1173	TRF	Tandem_Repeat	92786	92890	119	+	.	.
scaffold1173	subtractBed	intrn	101025	101084	.	-	.	Parent=CGI_10005747;
	scaffold1173	TRF	Tandem_Repeat	101025	101084	120	+	.	.
scaffold1173	subtractBed	intrn	100093	100200	.	-	.	Parent=CGI_10005747;
	scaffold1173	WUBlastX	LINE_Penelope	100093	100200	56	+	.	.
scaffold1173	subtractBed	intrn	100172	100672	.	-	.	Parent=CGI_10005747;
	scaffold1173	WUBlastX	LINE_Penelope	100172	100672	129	+	.	.
scaffold1174	subtractBed	intrn	37143	38144	.	-	.	Parent=CGI_10026023;
	scaffold1174	WUBlastX	LINE_L1-Tx1	37143	38144	133	-	.	.
scaffold1174	subtractBed	intrn	38490	38513	.	-	.	Parent=CGI_10026023;
	scaffold1174	WUBlastX	LINE_L1	38490	38582	20	-	.	.
scaffold1174	subtractBed	intrn	140519	141031	.	+	.	Parent=CGI_10026027;
	scaffold1174	WUBlastX	LINE_CR1-L2	140519	141031	185	-	.	.
scaffold1174	subtractBed	intrn	141217	141258	.	+	.	Parent=CGI_10026027;
	scaffold1174	WUBlastX	LINE_CR1	141217	141258	20	-	.	.
scaffold1174	subtractBed	intrn	141027	141218	.	+	.	Parent=CGI_10026027;
	scaffold1174	WUBlastX	LINE_L2	141027	141218	58	-	.	.
scaffold1174	subtractBed	intrn	141051	141251	.	+	.	Parent=CGI_10026027;
	scaffold1174	WUBlastX	LINE_LOA	141051	141251	27	-	.	.
scaffold1174	subtractBed	intrn	142997	143101	.	+	.	Parent=CGI_10026027;
	scaffold1174	TRF	Tandem_Repeat	142997	143101	192	+	.	.
scaffold1174	subtractBed	intrn	176989	177081	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	176989	177081	186	+	.	.
scaffold1174	subtractBed	intrn	177756	177789	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	177756	177789	68	+	.	.
scaffold1174	subtractBed	intrn	169463	170149	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1	169463	170149	95	+	.	.
scaffold1174	subtractBed	intrn	170160	170654	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1-Tx1	170160	170654	108	+	.	.
scaffold1174	subtractBed	intrn	169577	170143	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1	169577	170143	307	+	.	.
scaffold1174	subtractBed	intrn	170169	170567	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1-Tx1	170169	170567	145	+	.	.
scaffold1174	subtractBed	intrn	169577	170299	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1	169577	170299	200	+	.	.
scaffold1174	subtractBed	intrn	170760	171128	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1-Tx1	170760	171128	47	+	.	.
scaffold1174	subtractBed	intrn	171048	171233	.	-	.	Parent=CGI_10026029;
	scaffold1174	WUBlastX	LINE_L1-Tx1	171048	171233	31	+	.	.
scaffold1174	subtractBed	intrn	180283	180319	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	180283	180319	65	+	.	.
scaffold1174	subtractBed	intrn	185967	186024	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	185967	186024	98	+	.	.
scaffold1174	subtractBed	intrn	188020	188050	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	188020	188050	53	+	.	.
scaffold1174	subtractBed	intrn	189971	190037	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	189971	190037	127	+	.	.
scaffold1174	subtractBed	intrn	190214	190246	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	190214	190246	57	+	.	.
scaffold1174	subtractBed	intrn	190913	190972	.	-	.	Parent=CGI_10026029;
	scaffold1174	TRF	Tandem_Repeat	190913	190972	50	+	.	.
scaffold1174	subtractBed	intrn	243840	243872	.	-	.	Parent=CGI_10026031;
	scaffold1174	TRF	Tandem_Repeat	243840	243872	57	+	.	.
scaffold1174	subtractBed	intrn	243872	243904	.	-	.	Parent=CGI_10026031;
	scaffold1174	TRF	Tandem_Repeat	243872	243904	66	+	.	.
scaffold1174	subtractBed	intrn	312208	312255	.	+	.	Parent=CGI_10026033;
	scaffold1174	TRF	Tandem_Repeat	312208	312255	96	+	.	.
scaffold1174	subtractBed	intrn	331740	331783	.	+	.	Parent=CGI_10026034;
	scaffold1174	TRF	Tandem_Repeat	331740	331783	88	+	.	.
scaffold1174	subtractBed	intrn	356659	356854	.	-	.	Parent=CGI_10026035;
	scaffold1174	TRF	Tandem_Repeat	356659	356854	338	+	.	.
scaffold1174	subtractBed	intrn	356659	356854	.	-	.	Parent=CGI_10026035;
	scaffold1174	TRF	Tandem_Repeat	356659	356854	346	+	.	.
scaffold1174	subtractBed	intrn	379889	379923	.	-	.	Parent=CGI_10026036;
	scaffold1174	TRF	Tandem_Repeat	379889	379923	63	+	.	.
scaffold1174	subtractBed	intrn	405727	405764	.	+	.	Parent=CGI_10026037;
	scaffold1174	TRF	Tandem_Repeat	405727	405764	76	+	.	.
scaffold1174	subtractBed	intrn	424412	424450	.	-	.	Parent=CGI_10026038;
	scaffold1174	TRF	Tandem_Repeat	424412	424450	78	+	.	.
scaffold1174	subtractBed	intrn	445276	445342	.	+	.	Parent=CGI_10026041;
	scaffold1174	TRF	Tandem_Repeat	445276	445342	71	+	.	.
scaffold1174	subtractBed	intrn	465632	465659	.	-	.	Parent=CGI_10026043;
	scaffold1174	TRF	Tandem_Repeat	465632	465659	56	+	.	.
scaffold1174	subtractBed	intrn	469265	470052	.	-	.	Parent=CGI_10026043;
	scaffold1174	TRF	Tandem_Repeat	469265	470052	490	+	.	.
scaffold1174	subtractBed	intrn	470146	470334	.	-	.	Parent=CGI_10026043;
	scaffold1174	TRF	Tandem_Repeat	470146	470334	155	+	.	.
scaffold1174	subtractBed	intrn	470786	471751	.	-	.	Parent=CGI_10026043;
	scaffold1174	TRF	Tandem_Repeat	470786	471955	455	+	.	.
scaffold1174	subtractBed	intrn	520270	520300	.	-	.	Parent=CGI_10026049;
	scaffold1174	TRF	Tandem_Repeat	520270	520300	53	+	.	.
scaffold1174	subtractBed	intrn	520298	520330	.	-	.	Parent=CGI_10026049;
	scaffold1174	TRF	Tandem_Repeat	520298	520330	66	+	.	.
scaffold1174	subtractBed	intrn	521970	522008	.	-	.	Parent=CGI_10026049;
	scaffold1174	TRF	Tandem_Repeat	521970	522008	78	+	.	.
scaffold1174	subtractBed	intrn	526773	527082	.	-	.	Parent=CGI_10026049;
	scaffold1174	TRF	Tandem_Repeat	526773	527082	530	+	.	.
scaffold1174	subtractBed	intrn	557490	557545	.	+	.	Parent=CGI_10026051;
	scaffold1174	TRF	Tandem_Repeat	557490	557545	94	+	.	.
scaffold1174	subtractBed	intrn	570076	570121	.	-	.	Parent=CGI_10026052;
	scaffold1174	TRF	Tandem_Repeat	570076	570121	76	+	.	.
scaffold1174	subtractBed	intrn	570852	570882	.	-	.	Parent=CGI_10026052;
	scaffold1174	TRF	Tandem_Repeat	570852	570882	62	+	.	.
scaffold1174	subtractBed	intrn	586042	586082	.	-	.	Parent=CGI_10026054;
	scaffold1174	TRF	Tandem_Repeat	586042	586082	82	+	.	.
scaffold1174	subtractBed	intrn	591630	591672	.	-	.	Parent=CGI_10026055;
	scaffold1174	TRF	Tandem_Repeat	591630	591672	86	+	.	.
scaffold1174	subtractBed	intrn	598654	600073	.	+	.	Parent=CGI_10026056;
	scaffold1174	TRF	Tandem_Repeat	598654	600073	2232	+	.	.
scaffold1174	subtractBed	intrn	651068	651102	.	-	.	Parent=CGI_10026060;
	scaffold1174	TRF	Tandem_Repeat	651068	651102	70	+	.	.
scaffold1174	subtractBed	intrn	729955	730001	.	-	.	Parent=CGI_10026063;
	scaffold1174	TRF	Tandem_Repeat	729955	730001	94	+	.	.
scaffold1174	subtractBed	intrn	738505	738533	.	-	.	Parent=CGI_10026063;
	scaffold1174	TRF	Tandem_Repeat	738505	738533	58	+	.	.
scaffold1174	subtractBed	intrn	741007	741038	.	-	.	Parent=CGI_10026063;
	scaffold1174	TRF	Tandem_Repeat	741007	741038	64	+	.	.
scaffold1174	subtractBed	intrn	742685	742744	.	-	.	Parent=CGI_10026063;
	scaffold1174	TRF	Tandem_Repeat	742685	742744	113	+	.	.
scaffold1174	subtractBed	intrn	812998	813044	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	812998	813044	94	+	.	.
scaffold1174	subtractBed	intrn	820703	820785	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	820703	820785	166	+	.	.
scaffold1174	subtractBed	intrn	822430	822470	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	822430	822470	55	+	.	.
scaffold1174	subtractBed	intrn	825332	825703	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	825332	825703	645	+	.	.
scaffold1174	subtractBed	intrn	829836	829916	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	829836	829916	144	+	.	.
scaffold1174	subtractBed	intrn	834285	834328	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	834285	834328	56	+	.	.
scaffold1174	subtractBed	intrn	834296	834325	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	834296	834325	53	+	.	.
scaffold1174	subtractBed	intrn	843709	843812	.	+	.	Parent=CGI_10026068;
	scaffold1174	TRF	Tandem_Repeat	843709	843812	50	+	.	.
scaffold1174	subtractBed	intrn	866190	866217	.	-	.	Parent=CGI_10026070;
	scaffold1174	TRF	Tandem_Repeat	866190	866217	56	+	.	.
scaffold1174	subtractBed	intrn	928574	928895	.	+	.	Parent=CGI_10026072;
	scaffold1174	TRF	Tandem_Repeat	928574	928895	635	+	.	.
scaffold1174	subtractBed	intrn	932373	932460	.	+	.	Parent=CGI_10026072;
	scaffold1174	TRF	Tandem_Repeat	932373	932460	126	+	.	.
scaffold1174	subtractBed	intrn	928914	929780	.	+	.	Parent=CGI_10026072;
	scaffold1174	WUBlastX	DNA_IS4EU	928914	929780	180	-	.	.
scaffold1174	subtractBed	intrn	930297	930782	.	+	.	Parent=CGI_10026072;
	scaffold1174	WUBlastX	DNA_IS4EU	930297	930782	203	-	.	.
scaffold1174	subtractBed	intrn	928950	929675	.	+	.	Parent=CGI_10026072;
	scaffold1174	WUBlastX	DNA_Kolobok-IS4	928950	929675	235	-	.	.
scaffold1174	subtractBed	intrn	929658	930080	.	+	.	Parent=CGI_10026072;
	scaffold1174	WUBlastX	DNA_IS4EU	929658	930080	44	-	.	.
scaffold1174	subtractBed	intrn	930336	931175	.	+	.	Parent=CGI_10026072;
	scaffold1174	WUBlastX	DNA_Kolobok-Hyd	930336	931175	185	-	.	.
scaffold1174	subtractBed	intrn	975554	975555	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	975554	975730	57	+	.	.
scaffold1174	subtractBed	intrn	975896	975904	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	975896	975979	24	+	.	.
scaffold1174	subtractBed	intrn	975725	975730	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	975554	975730	57	+	.	.
scaffold1174	subtractBed	intrn	975975	975979	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	975896	975979	24	+	.	.
scaffold1174	subtractBed	intrn	976662	976711	.	+	.	Parent=CGI_10026076;
	scaffold1174	TRF	Tandem_Repeat	976662	976711	100	+	.	.
scaffold1174	subtractBed	intrn	978632	978892	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	978632	978892	203	-	.	.
scaffold1174	subtractBed	intrn	979433	979645	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	979433	979645	163	-	.	.
scaffold1174	subtractBed	intrn	976904	977128	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	976904	977128	51	-	.	.
scaffold1174	subtractBed	intrn	976904	977173	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	976904	977173	43	-	.	.
scaffold1174	subtractBed	intrn	979421	979681	.	+	.	Parent=CGI_10026076;
	scaffold1174	WUBlastX	DNA_Harbinger	979421	979681	145	-	.	.
scaffold1174	subtractBed	intrn	1005658	1005714	.	-	.	Parent=CGI_10026078;
	scaffold1174	TRF	Tandem_Repeat	1005658	1005714	114	+	.	.
scaffold1174	subtractBed	intrn	1075123	1075275	.	+	.	Parent=CGI_10026080;
	scaffold1174	WUBlastX	DNA_hAT-Blackja	1075123	1075275	22	-	.	.
scaffold1174	subtractBed	intrn	1075726	1075941	.	+	.	Parent=CGI_10026080;
	scaffold1174	WUBlastX	DNA_hAT-Blackja	1075726	1075941	93	-	.	.
scaffold1174	subtractBed	intrn	1076466	1076669	.	+	.	Parent=CGI_10026080;
	scaffold1174	WUBlastX	DNA_hAT-Blackja	1076466	1076669	28	-	.	.
scaffold1174	subtractBed	intrn	1074693	1074815	.	+	.	Parent=CGI_10026080;
	scaffold1174	WUBlastX	DNA_hAT-Blackja	1074693	1074815	55	-	.	.
scaffold1174	subtractBed	intrn	1076124	1076351	.	+	.	Parent=CGI_10026080;
	scaffold1174	WUBlastX	DNA_hAT-Blackja	1076124	1076351	86	-	.	.
scaffold1174	subtractBed	intrn	1091543	1091689	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	LTR_Pao	1091543	1091689	68	+	.	.
scaffold1174	subtractBed	intrn	1089703	1090707	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	DNA_TcMar-Fot1	1089703	1090707	42	+	.	.
scaffold1174	subtractBed	intrn	1089703	1090089	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	DNA_TcMar-Fot1	1089703	1090089	217	+	.	.
scaffold1174	subtractBed	intrn	1088994	1089671	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	DNA_TcMar-Fot1	1088994	1089671	322	+	.	.
scaffold1174	subtractBed	intrn	1089685	1090149	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	DNA_TcMar-Fot1	1089685	1090149	154	+	.	.
scaffold1174	subtractBed	intrn	1082467	1082823	.	+	.	Parent=CGI_10026081;
	scaffold1174	WUBlastX	DNA_Kolobok-Hyd	1082467	1082823	66	+	.	.
scaffold1177	subtractBed	intrn	79526	80289	.	+	.	Parent=CGI_10003914;
	scaffold1177	TRF	Tandem_Repeat	79526	80289	1438	+	.	.
scaffold1177	subtractBed	intrn	81549	81883	.	+	.	Parent=CGI_10003914;
	scaffold1177	TRF	Tandem_Repeat	81549	81883	598	+	.	.
scaffold1179	subtractBed	intrn	17715	17768	.	+	.	Parent=CGI_10027339;
	scaffold1179	TRF	Tandem_Repeat	17715	17768	81	+	.	.
scaffold1179	subtractBed	intrn	17090	17311	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	17090	17311	68	+	.	.
scaffold1179	subtractBed	intrn	17862	17862	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	17862	18113	43	+	.	.
scaffold1179	subtractBed	intrn	20852	20908	.	+	.	Parent=CGI_10027339;
	scaffold1179	TRF	Tandem_Repeat	20852	20908	62	+	.	.
scaffold1179	subtractBed	intrn	24536	24580	.	+	.	Parent=CGI_10027339;
	scaffold1179	TRF	Tandem_Repeat	24536	24580	90	+	.	.
scaffold1179	subtractBed	intrn	25524	25555	.	+	.	Parent=CGI_10027339;
	scaffold1179	TRF	Tandem_Repeat	25524	25555	55	+	.	.
scaffold1179	subtractBed	intrn	26465	26514	.	+	.	Parent=CGI_10027339;
	scaffold1179	TRF	Tandem_Repeat	26465	26514	73	+	.	.
scaffold1179	subtractBed	intrn	22773	22970	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22773	22970	111	+	.	.
scaffold1179	subtractBed	intrn	22967	23077	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22967	23077	64	+	.	.
scaffold1179	subtractBed	intrn	22195	22767	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy-Cigr	22195	22767	318	+	.	.
scaffold1179	subtractBed	intrn	21997	22620	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	21997	22620	162	+	.	.
scaffold1179	subtractBed	intrn	23243	23497	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy-Cigr	23243	23497	57	+	.	.
scaffold1179	subtractBed	intrn	18212	18355	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	18212	18355	69	+	.	.
scaffold1179	subtractBed	intrn	22093	22626	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22093	22626	199	+	.	.
scaffold1179	subtractBed	intrn	23544	23819	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	23544	23819	54	+	.	.
scaffold1179	subtractBed	intrn	23550	23741	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	23550	23741	69	+	.	.
scaffold1179	subtractBed	intrn	22183	22875	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22183	22875	202	+	.	.
scaffold1179	subtractBed	intrn	23541	23708	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	23541	23708	79	+	.	.
scaffold1179	subtractBed	intrn	18342	18506	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	18342	18506	151	+	.	.
scaffold1179	subtractBed	intrn	18609	18722	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	18609	18722	60	+	.	.
scaffold1179	subtractBed	intrn	18098	18113	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	17862	18113	43	+	.	.
scaffold1179	subtractBed	intrn	23243	23401	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	23243	23401	64	+	.	.
scaffold1179	subtractBed	intrn	23499	23657	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	23499	23657	29	+	.	.
scaffold1179	subtractBed	intrn	24077	24265	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	24077	24265	20	+	.	.
scaffold1179	subtractBed	intrn	22967	23140	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22967	23140	58	+	.	.
scaffold1179	subtractBed	intrn	18300	18506	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	DNA_Harbinger	18300	18506	129	+	.	.
scaffold1179	subtractBed	intrn	22192	22623	.	+	.	Parent=CGI_10027339;
	scaffold1179	WUBlastX	LTR_Gypsy	22192	22623	334	+	.	.
scaffold1179	subtractBed	intrn	40623	40654	.	+	.	Parent=CGI_10027340;
	scaffold1179	TRF	Tandem_Repeat	40623	40654	64	+	.	.
scaffold1179	subtractBed	intrn	44236	44325	.	+	.	Parent=CGI_10027340;
	scaffold1179	WUBlastX	LINE_CR1-L2	44236	44325	24	-	.	.
scaffold1179	subtractBed	intrn	42459	44234	.	+	.	Parent=CGI_10027340;
	scaffold1179	WUBlastX	LINE_CR1-L2	42459	44234	271	-	.	.
scaffold1179	subtractBed	intrn	42459	43616	.	+	.	Parent=CGI_10027340;
	scaffold1179	WUBlastX	LINE_CR1-L2	42459	43616	326	-	.	.
scaffold1179	subtractBed	intrn	83679	83819	.	+	.	Parent=CGI_10027341;
	scaffold1179	TRF	Tandem_Repeat	83679	83819	102	+	.	.
scaffold1179	subtractBed	intrn	84454	84960	.	+	.	Parent=CGI_10027341;
	scaffold1179	WUBlastX	LINE_RTE-X	84454	84960	103	+	.	.
scaffold1179	subtractBed	intrn	88635	88664	.	+	.	Parent=CGI_10027341;
	scaffold1179	TRF	Tandem_Repeat	88635	88664	51	+	.	.
scaffold1179	subtractBed	intrn	90253	90554	.	+	.	Parent=CGI_10027341;
	scaffold1179	TRF	Tandem_Repeat	90253	90554	277	+	.	.
scaffold1179	subtractBed	intrn	90253	90554	.	+	.	Parent=CGI_10027341;
	scaffold1179	TRF	Tandem_Repeat	90253	90554	249	+	.	.
scaffold1179	subtractBed	intrn	113009	113034	.	-	.	Parent=CGI_10027343;
	scaffold1179	TRF	Tandem_Repeat	113009	113034	52	+	.	.
scaffold1179	subtractBed	intrn	122097	122126	.	+	.	Parent=CGI_10027344;
	scaffold1179	TRF	Tandem_Repeat	122097	122126	51	+	.	.
scaffold1179	subtractBed	intrn	124165	124382	.	+	.	Parent=CGI_10027344;
	scaffold1179	TRF	Tandem_Repeat	124165	124382	357	+	.	.
scaffold1179	subtractBed	intrn	184793	184860	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	184793	184860	84	+	.	.
scaffold1179	subtractBed	intrn	187912	188515	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	187912	188515	338	+	.	.
scaffold1179	subtractBed	intrn	188619	188660	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	188619	188660	66	+	.	.
scaffold1179	subtractBed	intrn	191061	191739	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	191061	191739	1160	+	.	.
scaffold1179	subtractBed	intrn	198942	199377	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	198942	199377	509	+	.	.
scaffold1179	subtractBed	intrn	199011	199363	.	-	.	Parent=CGI_10027347;
	scaffold1179	TRF	Tandem_Repeat	199011	199363	373	+	.	.
scaffold1179	subtractBed	intrn	216651	216687	.	+	.	Parent=CGI_10027348;
	scaffold1179	TRF	Tandem_Repeat	216651	216687	65	+	.	.
scaffold1179	subtractBed	intrn	226785	227054	.	+	.	Parent=CGI_10027348;
	scaffold1179	TRF	Tandem_Repeat	226785	227054	495	+	.	.
scaffold1179	subtractBed	intrn	247961	248223	.	-	.	Parent=CGI_10027350;
	scaffold1179	TRF	Tandem_Repeat	247961	248223	228	+	.	.
scaffold1179	subtractBed	intrn	307466	307504	.	+	.	Parent=CGI_10027353;
	scaffold1179	TRF	Tandem_Repeat	307466	307504	78	+	.	.
scaffold1179	subtractBed	intrn	340581	340812	.	+	.	Parent=CGI_10027356;
	scaffold1179	TRF	Tandem_Repeat	340581	340812	118	+	.	.
scaffold1179	subtractBed	intrn	362504	362543	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	362504	362543	80	+	.	.
scaffold1179	subtractBed	intrn	362708	362748	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	362708	362748	82	+	.	.
scaffold1179	subtractBed	intrn	367085	367427	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	367085	367427	550	+	.	.
scaffold1179	subtractBed	intrn	368203	369114	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	368203	369811	1156	+	.	.
scaffold1179	subtractBed	intrn	368203	369114	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	368203	369811	1281	+	.	.
scaffold1179	subtractBed	intrn	369209	369811	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	368203	369811	1156	+	.	.
scaffold1179	subtractBed	intrn	369209	369811	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	368203	369811	1281	+	.	.
scaffold1179	subtractBed	intrn	375503	375670	.	+	.	Parent=CGI_10027358;
	scaffold1179	TRF	Tandem_Repeat	375503	375670	264	+	.	.
scaffold1179	subtractBed	intrn	375503	375670	.	-	.	Parent=CGI_10027359;
	scaffold1179	TRF	Tandem_Repeat	375503	375670	264	+	.	.
scaffold1179	subtractBed	intrn	439370	439414	.	-	.	Parent=CGI_10027365;
	scaffold1179	TRF	Tandem_Repeat	439370	439414	83	+	.	.
scaffold1179	subtractBed	intrn	439719	439775	.	-	.	Parent=CGI_10027365;
	scaffold1179	TRF	Tandem_Repeat	439719	439775	114	+	.	.
scaffold1179	subtractBed	intrn	443994	444206	.	-	.	Parent=CGI_10027365;
	scaffold1179	WUBlastX	DNA_Harbinger	443994	444206	91	+	.	.
scaffold1179	subtractBed	intrn	454708	454757	.	-	.	Parent=CGI_10027367;
	scaffold1179	TRF	Tandem_Repeat	454708	454757	52	+	.	.
scaffold1179	subtractBed	intrn	485605	485669	.	+	.	Parent=CGI_10027373;
	scaffold1179	TRF	Tandem_Repeat	485605	485669	112	+	.	.
scaffold1179	subtractBed	intrn	515290	515358	.	+	.	Parent=CGI_10027375;
	scaffold1179	TRF	Tandem_Repeat	515290	515358	138	+	.	.
scaffold1179	subtractBed	intrn	587943	587976	.	-	.	Parent=CGI_10027379;
	scaffold1179	TRF	Tandem_Repeat	587943	587976	68	+	.	.
scaffold1179	subtractBed	intrn	595796	595948	.	-	.	Parent=CGI_10027379;
	scaffold1179	TRF	Tandem_Repeat	595796	595948	227	+	.	.
scaffold1179	subtractBed	intrn	596318	596390	.	-	.	Parent=CGI_10027379;
	scaffold1179	TRF	Tandem_Repeat	596318	596390	146	+	.	.
scaffold1179	subtractBed	intrn	859915	859959	.	+	.	Parent=CGI_10027390;
	scaffold1179	TRF	Tandem_Repeat	859915	859959	90	+	.	.
scaffold1179	subtractBed	intrn	910463	911074	.	-	.	Parent=CGI_10027392;
	scaffold1179	WUBlastX	LTR_Gypsy	910463	911074	73	-	.	.
scaffold1179	subtractBed	intrn	910416	910573	.	-	.	Parent=CGI_10027392;
	scaffold1179	WUBlastX	LTR_Copia	910301	910573	51	-	.	.
scaffold1179	subtractBed	intrn	940877	941167	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1	940877	941167	33	+	.	.
scaffold1179	subtractBed	intrn	939636	939992	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1-Tx1	939636	939992	80	+	.	.
scaffold1179	subtractBed	intrn	939452	939559	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1-Tx1	939452	939559	89	-	.	.
scaffold1179	subtractBed	intrn	940955	941167	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1-Tx1	940955	941167	77	+	.	.
scaffold1179	subtractBed	intrn	939636	939869	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1-Tx1	939636	939869	97	+	.	.
scaffold1179	subtractBed	intrn	939636	939917	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1-Tx1	939636	939917	81	+	.	.
scaffold1179	subtractBed	intrn	939540	939812	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1	939540	939812	87	+	.	.
scaffold1179	subtractBed	intrn	939636	939812	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1	939636	939812	122	+	.	.
scaffold1179	subtractBed	intrn	940955	941209	.	+	.	Parent=CGI_10027393;
	scaffold1179	WUBlastX	LINE_L1	940955	941209	25	+	.	.
scaffold1179	subtractBed	intrn	1009785	1009827	.	-	.	Parent=CGI_10027394;
	scaffold1179	TRF	Tandem_Repeat	1009785	1009827	77	+	.	.
scaffold1179	subtractBed	intrn	1036787	1036832	.	+	.	Parent=CGI_10027396;
	scaffold1179	TRF	Tandem_Repeat	1036787	1036832	92	+	.	.
scaffold1179	subtractBed	intrn	1066773	1066829	.	+	.	Parent=CGI_10027400;
	scaffold1179	TRF	Tandem_Repeat	1066773	1066829	107	+	.	.
scaffold1179	subtractBed	intrn	1068130	1068336	.	+	.	Parent=CGI_10027400;
	scaffold1179	WUBlastX	LINE_RTE-BovB	1068130	1068336	85	-	.	.
scaffold1179	subtractBed	intrn	1184311	1184361	.	-	.	Parent=CGI_10027411;
	scaffold1179	TRF	Tandem_Repeat	1184311	1184361	102	+	.	.
scaffold1179	subtractBed	intrn	1195981	1196073	.	+	.	Parent=CGI_10027413;
	scaffold1179	TRF	Tandem_Repeat	1195981	1196073	186	+	.	.
scaffold1179	subtractBed	intrn	1201910	1202026	.	+	.	Parent=CGI_10027413;
	scaffold1179	TRF	Tandem_Repeat	1201910	1202026	207	+	.	.
scaffold1179	subtractBed	intrn	1214496	1214542	.	-	.	Parent=CGI_10027415;
	scaffold1179	TRF	Tandem_Repeat	1214496	1214542	94	+	.	.
scaffold1179	subtractBed	intrn	1212986	1213552	.	-	.	Parent=CGI_10027415;
	scaffold1179	WUBlastX	LINE_L1	1212986	1213552	70	+	.	.
scaffold1179	subtractBed	intrn	1213256	1214002	.	-	.	Parent=CGI_10027415;
	scaffold1179	WUBlastX	LINE_L1-Tx1	1213256	1214002	87	+	.	.
scaffold1179	subtractBed	intrn	1212986	1213156	.	-	.	Parent=CGI_10027415;
	scaffold1179	WUBlastX	LINE_L1	1212986	1213156	71	+	.	.
scaffold1179	subtractBed	intrn	1213967	1214215	.	-	.	Parent=CGI_10027415;
	scaffold1179	WUBlastX	LINE_L1	1213967	1214215	51	+	.	.
scaffold1179	subtractBed	intrn	1214063	1214206	.	-	.	Parent=CGI_10027415;
	scaffold1179	WUBlastX	LINE_L1-Tx1	1214063	1214206	55	+	.	.
scaffold1179	subtractBed	intrn	1235685	1235753	.	-	.	Parent=CGI_10027416;
	scaffold1179	TRF	Tandem_Repeat	1235685	1235753	113	+	.	.
scaffold1179	subtractBed	intrn	1235685	1235747	.	-	.	Parent=CGI_10027416;
	scaffold1179	TRF	Tandem_Repeat	1235685	1235747	99	+	.	.
scaffold1179	subtractBed	intrn	1244928	1244970	.	-	.	Parent=CGI_10027416;
	scaffold1179	TRF	Tandem_Repeat	1244928	1244970	50	+	.	.
scaffold1179	subtractBed	intrn	1255839	1255867	.	-	.	Parent=CGI_10027416;
	scaffold1179	TRF	Tandem_Repeat	1255839	1255867	51	+	.	.
scaffold1179	subtractBed	intrn	1288828	1288859	.	+	.	Parent=CGI_10027419;
	scaffold1179	TRF	Tandem_Repeat	1288828	1288859	55	+	.	.
scaffold1179	subtractBed	intrn	1289031	1290153	.	+	.	Parent=CGI_10027419;
	scaffold1179	TRF	Tandem_Repeat	1289031	1290153	1389	+	.	.
scaffold1179	subtractBed	intrn	1299484	1301928	.	+	.	Parent=CGI_10027419;
	scaffold1179	WUBlastX	LTR_Gypsy	1299484	1301928	1966	-	.	.
scaffold1179	subtractBed	intrn	1298091	1299542	.	+	.	Parent=CGI_10027419;
	scaffold1179	WUBlastX	LTR_Gypsy	1298091	1299542	1173	-	.	.
scaffold1179	subtractBed	intrn	1295122	1295256	.	+	.	Parent=CGI_10027419;
	scaffold1179	WUBlastX	DNA_P	1295122	1295256	58	+	.	.
scaffold1179	subtractBed	intrn	1295044	1295274	.	+	.	Parent=CGI_10027419;
	scaffold1179	WUBlastX	LTR_Gypsy	1295044	1295274	55	+	.	.
scaffold1179	subtractBed	intrn	1335160	1335432	.	-	.	Parent=CGI_10027422;
	scaffold1179	WUBlastX	DNA_PiggyBac	1335160	1335432	38	-	.	.
scaffold1179	subtractBed	intrn	1334386	1334601	.	-	.	Parent=CGI_10027422;
	scaffold1179	WUBlastX	DNA_PiggyBac	1334386	1334601	65	-	.	.
scaffold1179	subtractBed	intrn	1348017	1348056	.	+	.	Parent=CGI_10027424;
	scaffold1179	TRF	Tandem_Repeat	1348017	1348056	80	+	.	.
scaffold118	subtractBed	intrn	2292	2369	.	-	.	Parent=CGI_10004578;
	scaffold118	TRF	Tandem_Repeat	2292	2369	156	+	.	.
scaffold118	subtractBed	intrn	8105	8583	.	-	.	Parent=CGI_10004578;
	scaffold118	TRF	Tandem_Repeat	8105	8583	586	+	.	.
scaffold118	subtractBed	intrn	63591	63633	.	-	.	Parent=CGI_10004582;
	scaffold118	TRF	Tandem_Repeat	63591	63633	86	+	.	.
scaffold118	subtractBed	intrn	72790	73296	.	+	.	Parent=CGI_10004583;
	scaffold118	WUBlastX	LINE_CR1-L2	72790	73296	225	+	.	.
scaffold118	subtractBed	intrn	72595	73329	.	+	.	Parent=CGI_10004583;
	scaffold118	WUBlastX	LINE_L2	72595	73329	148	+	.	.
scaffold118	subtractBed	intrn	74209	77424	.	+	.	Parent=CGI_10004583;
	scaffold118	WUBlastX	LINE_L2	74209	77424	1801	+	.	.
scaffold1180	subtractBed	intrn	16762	17959	.	+	.	Parent=CGI_10005979;
	scaffold1180	TRF	Tandem_Repeat	16762	17959	1607	+	.	.
scaffold1180	subtractBed	intrn	23575	23790	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	23575	23790	44	+	.	.
scaffold1180	subtractBed	intrn	23834	23986	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	23834	23986	22	+	.	.
scaffold1180	subtractBed	intrn	25797	26234	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	25797	26234	101	+	.	.
scaffold1180	subtractBed	intrn	24209	24349	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	24209	24349	66	+	.	.
scaffold1180	subtractBed	intrn	25043	25417	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	25043	25417	90	+	.	.
scaffold1180	subtractBed	intrn	24610	24945	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	24610	24945	171	+	.	.
scaffold1180	subtractBed	intrn	25727	25783	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	25727	25783	40	+	.	.
scaffold1180	subtractBed	intrn	24369	24659	.	+	.	Parent=CGI_10005979;
	scaffold1180	WUBlastX	LTR_DIRS	24369	24659	93	+	.	.
scaffold1180	subtractBed	intrn	38282	38309	.	+	.	Parent=CGI_10005979;
	scaffold1180	TRF	Tandem_Repeat	38282	38309	56	+	.	.
scaffold1180	subtractBed	intrn	38311	38420	.	+	.	Parent=CGI_10005979;
	scaffold1180	TRF	Tandem_Repeat	38311	38420	184	+	.	.
scaffold1180	subtractBed	intrn	41040	41075	.	+	.	Parent=CGI_10005979;
	scaffold1180	TRF	Tandem_Repeat	41040	41075	63	+	.	.
scaffold1180	subtractBed	intrn	48241	49037	.	+	.	Parent=CGI_10005980;
	scaffold1180	TRF	Tandem_Repeat	48241	49037	1398	+	.	.
scaffold1180	subtractBed	intrn	78909	78942	.	-	.	Parent=CGI_10005983;
	scaffold1180	TRF	Tandem_Repeat	78909	78942	68	+	.	.
scaffold1180	subtractBed	intrn	102505	102539	.	-	.	Parent=CGI_10005985;
	scaffold1180	TRF	Tandem_Repeat	102505	102539	61	+	.	.
scaffold1180	subtractBed	intrn	106913	107622	.	-	.	Parent=CGI_10005985;
	scaffold1180	TRF	Tandem_Repeat	106913	107622	1119	+	.	.
scaffold1181	subtractBed	intrn	48419	48447	.	-	.	Parent=CGI_10005106;
	scaffold1181	TRF	Tandem_Repeat	48419	48447	58	+	.	.
scaffold1181	subtractBed	intrn	75962	76052	.	+	.	Parent=CGI_10005107;
	scaffold1181	TRF	Tandem_Repeat	75962	76052	164	+	.	.
scaffold1181	subtractBed	intrn	82083	82140	.	+	.	Parent=CGI_10005107;
	scaffold1181	TRF	Tandem_Repeat	82083	82140	116	+	.	.
scaffold1181	subtractBed	intrn	82440	82477	.	+	.	Parent=CGI_10005107;
	scaffold1181	TRF	Tandem_Repeat	82440	82477	67	+	.	.
scaffold1181	subtractBed	intrn	97232	97272	.	+	.	Parent=CGI_10005108;
	scaffold1181	TRF	Tandem_Repeat	97232	97272	57	+	.	.
scaffold1182	subtractBed	intrn	20793	20833	.	-	.	Parent=CGI_10003511;
	scaffold1182	TRF	Tandem_Repeat	20793	20833	82	+	.	.
scaffold1182	subtractBed	intrn	56118	56152	.	-	.	Parent=CGI_10003513;
	scaffold1182	TRF	Tandem_Repeat	56118	56152	56	+	.	.
scaffold1182	subtractBed	intrn	59678	59839	.	-	.	Parent=CGI_10003513;
	scaffold1182	TRF	Tandem_Repeat	59678	59839	54	+	.	.
scaffold1182	subtractBed	intrn	59701	59865	.	-	.	Parent=CGI_10003513;
	scaffold1182	TRF	Tandem_Repeat	59701	59865	87	+	.	.
scaffold1184	subtractBed	intrn	21824	21877	.	+	.	Parent=CGI_10001476;
	scaffold1184	TRF	Tandem_Repeat	21824	21877	108	+	.	.
scaffold1186	subtractBed	intrn	40039	40097	.	+	.	Parent=CGI_10010592;
	scaffold1186	TRF	Tandem_Repeat	40039	40097	109	+	.	.
scaffold1186	subtractBed	intrn	73224	73261	.	+	.	Parent=CGI_10010593;
	scaffold1186	TRF	Tandem_Repeat	73224	73261	58	+	.	.
scaffold1186	subtractBed	intrn	70821	70979	.	+	.	Parent=CGI_10010593;
	scaffold1186	WUBlastX	LINE_RTE-X	70821	70979	25	+	.	.
scaffold1186	subtractBed	intrn	71752	71904	.	+	.	Parent=CGI_10010593;
	scaffold1186	WUBlastX	LINE_RTE-X	71752	71904	40	+	.	.
scaffold1186	subtractBed	intrn	70729	70809	.	+	.	Parent=CGI_10010593;
	scaffold1186	WUBlastX	LINE_RTE-X	70729	70809	46	+	.	.
scaffold1186	subtractBed	intrn	71791	71904	.	+	.	Parent=CGI_10010593;
	scaffold1186	WUBlastX	LINE_RTE-X	71791	71904	45	+	.	.
scaffold1186	subtractBed	intrn	87463	87529	.	+	.	Parent=CGI_10010593;
	scaffold1186	TRF	Tandem_Repeat	87463	87529	71	+	.	.
scaffold1186	subtractBed	intrn	90316	90361	.	+	.	Parent=CGI_10010593;
	scaffold1186	TRF	Tandem_Repeat	90316	90361	65	+	.	.
scaffold1186	subtractBed	intrn	205638	206678	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	205638	206678	956	+	.	.
scaffold1186	subtractBed	intrn	200177	200539	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	200177	200539	46	+	.	.
scaffold1186	subtractBed	intrn	200612	202279	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	200612	202279	968	+	.	.
scaffold1186	subtractBed	intrn	203615	203848	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	203615	203848	74	+	.	.
scaffold1186	subtractBed	intrn	203702	203848	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	203702	203848	165	+	.	.
scaffold1186	subtractBed	intrn	203675	203848	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	203675	203848	111	+	.	.
scaffold1186	subtractBed	intrn	203845	205638	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	203845	205638	1384	+	.	.
scaffold1186	subtractBed	intrn	200264	202597	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Pao	200264	202597	735	+	.	.
scaffold1186	subtractBed	intrn	210219	210271	.	+	.	Parent=CGI_10010597;
	scaffold1186	TRF	Tandem_Repeat	210219	210271	97	+	.	.
scaffold1186	subtractBed	intrn	212019	212528	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	212019	212528	300	+	.	.
scaffold1186	subtractBed	intrn	210646	210921	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	210646	210921	64	+	.	.
scaffold1186	subtractBed	intrn	210574	210894	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	210574	210894	36	+	.	.
scaffold1186	subtractBed	intrn	212504	212761	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	212504	212761	259	+	.	.
scaffold1186	subtractBed	intrn	210694	210909	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	210694	210909	64	+	.	.
scaffold1186	subtractBed	intrn	210954	212435	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	210954	212435	377	+	.	.
scaffold1186	subtractBed	intrn	212758	214686	.	+	.	Parent=CGI_10010597;
	scaffold1186	WUBlastX	LTR_Gypsy	212758	214686	444	+	.	.
scaffold1186	subtractBed	intrn	217534	217572	.	+	.	Parent=CGI_10010597;
	scaffold1186	TRF	Tandem_Repeat	217534	217572	51	+	.	.
scaffold1186	subtractBed	intrn	221602	221656	.	+	.	Parent=CGI_10010597;
	scaffold1186	TRF	Tandem_Repeat	221602	221656	110	+	.	.
scaffold1186	subtractBed	intrn	225105	225163	.	-	.	Parent=CGI_10010599;
	scaffold1186	TRF	Tandem_Repeat	225105	225163	118	+	.	.
scaffold1186	subtractBed	intrn	238333	238812	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1-Tx1	238333	238812	21	+	.	.
scaffold1186	subtractBed	intrn	243345	243824	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	DNA_Crypton	243345	243824	173	-	.	.
scaffold1186	subtractBed	intrn	240392	240832	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_Penelope	240392	240832	93	+	.	.
scaffold1186	subtractBed	intrn	236970	237062	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1-Tx1	236970	237062	25	+	.	.
scaffold1186	subtractBed	intrn	240991	241101	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_Penelope	240991	241101	42	+	.	.
scaffold1186	subtractBed	intrn	240395	240985	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_Penelope	240395	240985	55	+	.	.
scaffold1186	subtractBed	intrn	237198	238337	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1-Tx1	237198	238337	319	+	.	.
scaffold1186	subtractBed	intrn	237724	238560	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1	237724	238560	78	+	.	.
scaffold1186	subtractBed	intrn	236770	236877	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1	236770	236877	39	+	.	.
scaffold1186	subtractBed	intrn	236779	236850	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	LINE_L1-Tx1	236779	236850	44	+	.	.
scaffold1186	subtractBed	intrn	244282	244318	.	-	.	Parent=CGI_10010599;
	scaffold1186	WUBlastX	DNA_Crypton	243848	244318	69	-	.	.
scaffold1187	subtractBed	intrn	84261	84533	.	-	.	Parent=CGI_10004160;
	scaffold1187	TRF	Tandem_Repeat	84261	84593	335	+	.	.
scaffold1188	subtractBed	intrn	31926	31972	.	+	.	Parent=CGI_10025456;
	scaffold1188	TRF	Tandem_Repeat	31926	31972	94	+	.	.
scaffold1188	subtractBed	intrn	35612	35661	.	+	.	Parent=CGI_10025456;
	scaffold1188	TRF	Tandem_Repeat	35612	35661	100	+	.	.
scaffold1188	subtractBed	intrn	112828	114204	.	+	.	Parent=CGI_10025457;
	scaffold1188	TRF	Tandem_Repeat	112828	114204	985	+	.	.
scaffold1188	subtractBed	intrn	112866	114204	.	+	.	Parent=CGI_10025457;
	scaffold1188	TRF	Tandem_Repeat	112866	114204	1384	+	.	.
scaffold1188	subtractBed	intrn	164812	165516	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LINE_Penelope	164812	165516	116	-	.	.
scaffold1188	subtractBed	intrn	164809	165408	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LINE_Penelope	164809	165408	205	-	.	.
scaffold1188	subtractBed	intrn	165395	165580	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LINE_Penelope	165395	165580	73	-	.	.
scaffold1188	subtractBed	intrn	175477	176370	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy	175477	176370	129	-	.	.
scaffold1188	subtractBed	intrn	170978	172444	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy-Cigr	170978	172444	596	-	.	.
scaffold1188	subtractBed	intrn	171257	173533	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy-Cigr	171257	173533	1084	-	.	.
scaffold1188	subtractBed	intrn	173484	173930	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy-Cigr	173484	173930	432	-	.	.
scaffold1188	subtractBed	intrn	170693	170732	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Copia	170517	170732	20	-	.	.
scaffold1188	subtractBed	intrn	173475	174059	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy	173475	174059	298	-	.	.
scaffold1188	subtractBed	intrn	173931	175250	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LINE_L1-Tx1	173931	175250	183	+	.	.
scaffold1188	subtractBed	intrn	176089	176592	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy	176089	176592	79	-	.	.
scaffold1188	subtractBed	intrn	176592	176656	.	-	.	Parent=CGI_10025460;
	scaffold1188	WUBlastX	LTR_Gypsy	176592	177023	51	-	.	.
scaffold1188	subtractBed	intrn	207571	208014	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy	207571	208014	83	-	.	.
scaffold1188	subtractBed	intrn	207150	207197	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy	207150	207197	21	-	.	.
scaffold1188	subtractBed	intrn	205624	206739	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy-Cigr	205624	206739	178	-	.	.
scaffold1188	subtractBed	intrn	205417	205755	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy	205417	205755	27	-	.	.
scaffold1188	subtractBed	intrn	205588	205800	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy	205588	205800	76	-	.	.
scaffold1188	subtractBed	intrn	207619	208093	.	-	.	Parent=CGI_10025462;
	scaffold1188	WUBlastX	LTR_Gypsy	207619	208236	36	-	.	.
scaffold1188	subtractBed	intrn	217203	217361	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	DNA_Kolobok	217203	217361	75	+	.	.
scaffold1188	subtractBed	intrn	218048	218254	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	DNA_Kolobok	218048	218254	79	+	.	.
scaffold1188	subtractBed	intrn	216559	216909	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	LINE_Penelope	216559	216909	67	+	.	.
scaffold1188	subtractBed	intrn	216610	216774	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	LINE_Penelope	216610	216774	71	+	.	.
scaffold1188	subtractBed	intrn	217203	217409	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	DNA_Kolobok	217203	217409	34	+	.	.
scaffold1188	subtractBed	intrn	216082	216906	.	+	.	Parent=CGI_10025463;
	scaffold1188	WUBlastX	LINE_Penelope	216082	216906	42	+	.	.
scaffold1188	subtractBed	intrn	229295	229339	.	-	.	Parent=CGI_10025464;
	scaffold1188	TRF	Tandem_Repeat	229295	229339	56	+	.	.
scaffold1188	subtractBed	intrn	288924	290150	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	288924	290150	531	+	.	.
scaffold1188	subtractBed	intrn	288104	288358	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	288104	288358	75	+	.	.
scaffold1188	subtractBed	intrn	289167	290327	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	289167	290327	735	+	.	.
scaffold1188	subtractBed	intrn	288746	289171	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	288746	289171	238	+	.	.
scaffold1188	subtractBed	intrn	290760	291329	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	290760	291329	302	+	.	.
scaffold1188	subtractBed	intrn	290297	290761	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	290297	290761	190	+	.	.
scaffold1188	subtractBed	intrn	288143	288358	.	+	.	Parent=CGI_10025467;
	scaffold1188	WUBlastX	LTR_Ngaro	288143	288358	112	+	.	.
scaffold1188	subtractBed	intrn	321984	322049	.	-	.	Parent=CGI_10025470;
	scaffold1188	TRF	Tandem_Repeat	321984	322049	62	+	.	.
scaffold1188	subtractBed	intrn	389624	389740	.	-	.	Parent=CGI_10025474;
	scaffold1188	TRF	Tandem_Repeat	389624	389757	99	+	.	.
scaffold1188	subtractBed	intrn	392317	392354	.	-	.	Parent=CGI_10025474;
	scaffold1188	TRF	Tandem_Repeat	392317	392354	58	+	.	.
scaffold1188	subtractBed	intrn	480655	480747	.	+	.	Parent=CGI_10025480;
	scaffold1188	TRF	Tandem_Repeat	480655	480747	186	+	.	.
scaffold1188	subtractBed	intrn	526520	526553	.	+	.	Parent=CGI_10025484;
	scaffold1188	TRF	Tandem_Repeat	526520	526553	59	+	.	.
scaffold1188	subtractBed	intrn	532979	533263	.	+	.	Parent=CGI_10025484;
	scaffold1188	TRF	Tandem_Repeat	532979	533263	273	+	.	.
scaffold1188	subtractBed	intrn	540993	541035	.	+	.	Parent=CGI_10025484;
	scaffold1188	TRF	Tandem_Repeat	540993	541035	59	+	.	.
scaffold1188	subtractBed	intrn	570488	570579	.	+	.	Parent=CGI_10025486;
	scaffold1188	TRF	Tandem_Repeat	570488	570579	116	+	.	.
scaffold1188	subtractBed	intrn	570775	570933	.	+	.	Parent=CGI_10025486;
	scaffold1188	TRF	Tandem_Repeat	570775	570933	151	+	.	.
scaffold1188	subtractBed	intrn	570987	571078	.	+	.	Parent=CGI_10025486;
	scaffold1188	TRF	Tandem_Repeat	570987	571078	87	+	.	.
scaffold1188	subtractBed	intrn	584827	585044	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	584827	585044	296	+	.	.
scaffold1188	subtractBed	intrn	588553	588667	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	588553	588667	110	+	.	.
scaffold1188	subtractBed	intrn	588527	588862	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	588527	588862	399	+	.	.
scaffold1188	subtractBed	intrn	588576	588730	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	588576	588730	79	+	.	.
scaffold1188	subtractBed	intrn	588914	589078	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	588914	589078	127	+	.	.
scaffold1188	subtractBed	intrn	591328	591577	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	591328	591577	353	+	.	.
scaffold1188	subtractBed	intrn	591336	591604	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	591336	591604	194	+	.	.
scaffold1188	subtractBed	intrn	594652	594984	.	+	.	Parent=CGI_10025487;
	scaffold1188	TRF	Tandem_Repeat	594652	594984	380	+	.	.
scaffold1188	subtractBed	intrn	602722	602905	.	+	.	Parent=CGI_10025488;
	scaffold1188	TRF	Tandem_Repeat	602702	602905	214	+	.	.
scaffold1188	subtractBed	intrn	603964	604175	.	+	.	Parent=CGI_10025488;
	scaffold1188	TRF	Tandem_Repeat	603964	604175	239	+	.	.
scaffold1188	subtractBed	intrn	606486	608206	.	+	.	Parent=CGI_10025488;
	scaffold1188	TRF	Tandem_Repeat	606486	608206	2008	+	.	.
scaffold1188	subtractBed	intrn	606486	608206	.	+	.	Parent=CGI_10025488;
	scaffold1188	TRF	Tandem_Repeat	606486	608206	2024	+	.	.
scaffold1188	subtractBed	intrn	606486	608233	.	+	.	Parent=CGI_10025488;
	scaffold1188	TRF	Tandem_Repeat	606486	608233	1772	+	.	.
scaffold1188	subtractBed	intrn	611329	612327	.	+	.	Parent=CGI_10025489;
	scaffold1188	TRF	Tandem_Repeat	611329	612327	1005	+	.	.
scaffold1188	subtractBed	intrn	613651	614056	.	+	.	Parent=CGI_10025489;
	scaffold1188	TRF	Tandem_Repeat	613651	614056	751	+	.	.
scaffold1188	subtractBed	intrn	623517	623558	.	+	.	Parent=CGI_10025491;
	scaffold1188	TRF	Tandem_Repeat	623517	623558	84	+	.	.
scaffold1188	subtractBed	intrn	657104	657283	.	-	.	Parent=CGI_10025493;
	scaffold1188	WUBlastX	LINE_CR1-L2	657104	657283	66	-	.	.
scaffold1188	subtractBed	intrn	656893	657156	.	-	.	Parent=CGI_10025493;
	scaffold1188	WUBlastX	LINE_CR1-L2	656893	657156	92	-	.	.
scaffold1188	subtractBed	intrn	656507	656950	.	-	.	Parent=CGI_10025493;
	scaffold1188	WUBlastX	LINE_L2	656507	656950	50	-	.	.
scaffold1188	subtractBed	intrn	657104	657253	.	-	.	Parent=CGI_10025493;
	scaffold1188	WUBlastX	LINE_CR1-L2	657104	657253	78	-	.	.
scaffold1188	subtractBed	intrn	657098	657391	.	-	.	Parent=CGI_10025493;
	scaffold1188	WUBlastX	LINE_CR1-L2	657098	657391	22	-	.	.
scaffold1188	subtractBed	intrn	673231	673301	.	+	.	Parent=CGI_10025495;
	scaffold1188	TRF	Tandem_Repeat	673231	673301	142	+	.	.
scaffold1188	subtractBed	intrn	676429	676456	.	+	.	Parent=CGI_10025495;
	scaffold1188	TRF	Tandem_Repeat	676429	676456	56	+	.	.
scaffold1188	subtractBed	intrn	682211	682236	.	+	.	Parent=CGI_10025496;
	scaffold1188	TRF	Tandem_Repeat	682211	682236	52	+	.	.
scaffold1188	subtractBed	intrn	693095	693836	.	-	.	Parent=CGI_10025497;
	scaffold1188	TRF	Tandem_Repeat	693052	693836	1196	+	.	.
scaffold1188	subtractBed	intrn	695198	695236	.	-	.	Parent=CGI_10025497;
	scaffold1188	TRF	Tandem_Repeat	695198	695236	78	+	.	.
scaffold1188	subtractBed	intrn	722637	722867	.	+	.	Parent=CGI_10025499;
	scaffold1188	WUBlastX	LINE_RTE-X	722637	722867	33	-	.	.
scaffold1188	subtractBed	intrn	791480	791701	.	+	.	Parent=CGI_10025502;
	scaffold1188	WUBlastX	LINE_L1	791480	791701	109	-	.	.
scaffold1188	subtractBed	intrn	791254	791499	.	+	.	Parent=CGI_10025502;
	scaffold1188	WUBlastX	LINE_L1	791254	791499	90	-	.	.
scaffold1188	subtractBed	intrn	790953	791144	.	+	.	Parent=CGI_10025502;
	scaffold1188	WUBlastX	LINE_L1-Tx1	790953	791144	25	-	.	.
scaffold1188	subtractBed	intrn	791148	791237	.	+	.	Parent=CGI_10025502;
	scaffold1188	WUBlastX	LINE_L1-Tx1	791148	791237	31	-	.	.
scaffold1188	subtractBed	intrn	793920	793967	.	+	.	Parent=CGI_10025502;
	scaffold1188	TRF	Tandem_Repeat	793920	793967	60	+	.	.
scaffold1188	subtractBed	intrn	834971	835004	.	-	.	Parent=CGI_10025508;
	scaffold1188	TRF	Tandem_Repeat	834971	835004	68	+	.	.
scaffold1188	subtractBed	intrn	928436	928474	.	-	.	Parent=CGI_10025510;
	scaffold1188	TRF	Tandem_Repeat	928436	928474	55	+	.	.
scaffold1188	subtractBed	intrn	948403	948429	.	-	.	Parent=CGI_10025512;
	scaffold1188	TRF	Tandem_Repeat	948403	948429	54	+	.	.
scaffold1188	subtractBed	intrn	948717	948808	.	-	.	Parent=CGI_10025512;
	scaffold1188	TRF	Tandem_Repeat	948717	948808	87	+	.	.
scaffold1188	subtractBed	intrn	948895	949022	.	-	.	Parent=CGI_10025512;
	scaffold1188	TRF	Tandem_Repeat	948895	949022	91	+	.	.
scaffold1188	subtractBed	intrn	949249	949342	.	-	.	Parent=CGI_10025512;
	scaffold1188	TRF	Tandem_Repeat	949249	949342	127	+	.	.
scaffold1189	subtractBed	intrn	37489	37869	.	+	.	Parent=CGI_10023793;
	scaffold1189	WUBlastX	DNA_Zator	37489	37869	52	-	.	.
scaffold1189	subtractBed	intrn	42958	42988	.	+	.	Parent=CGI_10023793;
	scaffold1189	TRF	Tandem_Repeat	42958	42988	53	+	.	.
scaffold1189	subtractBed	intrn	71391	71445	.	+	.	Parent=CGI_10023796;
	scaffold1189	TRF	Tandem_Repeat	71391	71445	110	+	.	.
scaffold1189	subtractBed	intrn	109884	109922	.	-	.	Parent=CGI_10023798;
	scaffold1189	TRF	Tandem_Repeat	109884	109922	60	+	.	.
scaffold1189	subtractBed	intrn	140522	140573	.	+	.	Parent=CGI_10023800;
	scaffold1189	TRF	Tandem_Repeat	140522	140573	104	+	.	.
scaffold1189	subtractBed	intrn	141221	141424	.	+	.	Parent=CGI_10023800;
	scaffold1189	WUBlastX	LINE_L1-Tx1	141221	141424	38	-	.	.
scaffold1189	subtractBed	intrn	154047	154097	.	+	.	Parent=CGI_10023801;
	scaffold1189	TRF	Tandem_Repeat	154047	154097	102	+	.	.
scaffold1189	subtractBed	intrn	154936	154989	.	+	.	Parent=CGI_10023801;
	scaffold1189	TRF	Tandem_Repeat	154936	154989	65	+	.	.
scaffold1189	subtractBed	intrn	157242	157282	.	+	.	Parent=CGI_10023802;
	scaffold1189	TRF	Tandem_Repeat	157242	157282	82	+	.	.
scaffold1189	subtractBed	intrn	225836	226265	.	-	.	Parent=CGI_10023805;
	scaffold1189	TRF	Tandem_Repeat	225836	226265	554	+	.	.
scaffold1189	subtractBed	intrn	248328	248365	.	+	.	Parent=CGI_10023806;
	scaffold1189	TRF	Tandem_Repeat	248328	248365	76	+	.	.
scaffold1189	subtractBed	intrn	248590	248621	.	+	.	Parent=CGI_10023806;
	scaffold1189	TRF	Tandem_Repeat	248590	248621	57	+	.	.
scaffold1189	subtractBed	intrn	250752	250791	.	+	.	Parent=CGI_10023806;
	scaffold1189	TRF	Tandem_Repeat	250752	250791	80	+	.	.
scaffold1189	subtractBed	intrn	288882	288920	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	288882	288920	78	+	.	.
scaffold1189	subtractBed	intrn	304602	304636	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	304602	304636	70	+	.	.
scaffold1189	subtractBed	intrn	314494	314531	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	314494	314531	76	+	.	.
scaffold1189	subtractBed	intrn	316774	316842	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	316774	316842	50	+	.	.
scaffold1189	subtractBed	intrn	316774	316836	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	316774	316836	54	+	.	.
scaffold1189	subtractBed	intrn	316774	316836	.	+	.	Parent=CGI_10023808;
	scaffold1189	TRF	Tandem_Repeat	316774	316836	58	+	.	.
scaffold1189	subtractBed	intrn	330119	331782	.	-	.	Parent=CGI_10023809;
	scaffold1189	TRF	Tandem_Repeat	330119	331782	1875	+	.	.
scaffold1189	subtractBed	intrn	330618	331742	.	-	.	Parent=CGI_10023809;
	scaffold1189	TRF	Tandem_Repeat	330618	331742	990	+	.	.
scaffold1189	subtractBed	intrn	330187	331755	.	-	.	Parent=CGI_10023809;
	scaffold1189	TRF	Tandem_Repeat	330187	331755	1803	+	.	.
scaffold1189	subtractBed	intrn	403277	403307	.	+	.	Parent=CGI_10023812;
	scaffold1189	TRF	Tandem_Repeat	403277	403307	62	+	.	.
scaffold1189	subtractBed	intrn	403305	403348	.	+	.	Parent=CGI_10023812;
	scaffold1189	TRF	Tandem_Repeat	403305	403348	88	+	.	.
scaffold1189	subtractBed	intrn	410776	410893	.	+	.	Parent=CGI_10023813;
	scaffold1189	TRF	Tandem_Repeat	410774	410893	135	+	.	.
scaffold1189	subtractBed	intrn	411495	411758	.	+	.	Parent=CGI_10023813;
	scaffold1189	TRF	Tandem_Repeat	411495	411758	384	+	.	.
scaffold1189	subtractBed	intrn	411495	411795	.	+	.	Parent=CGI_10023813;
	scaffold1189	TRF	Tandem_Repeat	411495	411795	334	+	.	.
scaffold1189	subtractBed	intrn	413226	413317	.	+	.	Parent=CGI_10023813;
	scaffold1189	TRF	Tandem_Repeat	413226	413317	112	+	.	.
scaffold1189	subtractBed	intrn	413228	413317	.	+	.	Parent=CGI_10023813;
	scaffold1189	TRF	Tandem_Repeat	413228	413317	126	+	.	.
scaffold1189	subtractBed	intrn	424245	424364	.	+	.	Parent=CGI_10023814;
	scaffold1189	TRF	Tandem_Repeat	424245	424364	199	+	.	.
scaffold1189	subtractBed	intrn	519282	519364	.	-	.	Parent=CGI_10023820;
	scaffold1189	TRF	Tandem_Repeat	519282	519364	96	+	.	.
scaffold1189	subtractBed	intrn	519288	519376	.	-	.	Parent=CGI_10023820;
	scaffold1189	TRF	Tandem_Repeat	519288	519376	137	+	.	.
scaffold1189	subtractBed	intrn	519298	519389	.	-	.	Parent=CGI_10023820;
	scaffold1189	TRF	Tandem_Repeat	519298	519389	75	+	.	.
scaffold1189	subtractBed	intrn	519439	519489	.	-	.	Parent=CGI_10023820;
	scaffold1189	TRF	Tandem_Repeat	519439	519489	77	+	.	.
scaffold1189	subtractBed	intrn	569189	569248	.	+	.	Parent=CGI_10023823;
	scaffold1189	TRF	Tandem_Repeat	569189	569248	120	+	.	.
scaffold1189	subtractBed	intrn	577114	577323	.	+	.	Parent=CGI_10023823;
	scaffold1189	WUBlastX	LINE_RTE-X	577114	577422	48	-	.	.
scaffold1189	subtractBed	intrn	577183	577323	.	+	.	Parent=CGI_10023823;
	scaffold1189	WUBlastX	LINE_CR1	577183	577689	23	-	.	.
scaffold1189	subtractBed	intrn	582621	582701	.	+	.	Parent=CGI_10023824;
	scaffold1189	TRF	Tandem_Repeat	582621	582701	162	+	.	.
scaffold1189	subtractBed	intrn	636263	636313	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1	636263	636313	21	-	.	.
scaffold1189	subtractBed	intrn	635440	635721	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1	635440	635721	56	-	.	.
scaffold1189	subtractBed	intrn	633958	634836	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1-Tx1	633958	634836	129	-	.	.
scaffold1189	subtractBed	intrn	634946	635554	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1-Tx1	634946	635554	344	-	.	.
scaffold1189	subtractBed	intrn	636354	636728	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1-Tx1	636354	636728	64	-	.	.
scaffold1189	subtractBed	intrn	634809	635063	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1	634809	635063	53	-	.	.
scaffold1189	subtractBed	intrn	635437	635676	.	-	.	Parent=CGI_10023828;
	scaffold1189	WUBlastX	LINE_L1-Tx1	635437	635676	131	-	.	.
scaffold1189	subtractBed	intrn	690002	690061	.	+	.	Parent=CGI_10023829;
	scaffold1189	TRF	Tandem_Repeat	690002	690061	120	+	.	.
scaffold1189	subtractBed	intrn	742686	742726	.	-	.	Parent=CGI_10023830;
	scaffold1189	TRF	Tandem_Repeat	742686	742726	82	+	.	.
scaffold1189	subtractBed	intrn	746367	746438	.	-	.	Parent=CGI_10023830;
	scaffold1189	TRF	Tandem_Repeat	746367	746438	137	+	.	.
scaffold1189	subtractBed	intrn	748011	748039	.	-	.	Parent=CGI_10023830;
	scaffold1189	TRF	Tandem_Repeat	748011	748039	58	+	.	.
scaffold1189	subtractBed	intrn	760301	760353	.	+	.	Parent=CGI_10023831;
	scaffold1189	TRF	Tandem_Repeat	760301	760353	54	+	.	.
scaffold1189	subtractBed	intrn	774153	774281	.	+	.	Parent=CGI_10023832;
	scaffold1189	WUBlastX	LINE_RTE-X	774153	774281	38	-	.	.
scaffold1189	subtractBed	intrn	774029	774130	.	+	.	Parent=CGI_10023832;
	scaffold1189	WUBlastX	LINE_RTE-X	774029	774130	46	-	.	.
scaffold1189	subtractBed	intrn	773366	773863	.	+	.	Parent=CGI_10023832;
	scaffold1189	WUBlastX	LINE_RTE-X	773366	773863	103	-	.	.
scaffold1189	subtractBed	intrn	774029	774160	.	+	.	Parent=CGI_10023832;
	scaffold1189	WUBlastX	LINE_RTE-X	774029	774160	27	-	.	.
scaffold1189	subtractBed	intrn	773453	773947	.	+	.	Parent=CGI_10023832;
	scaffold1189	WUBlastX	LINE_RTE-X	773453	773947	69	-	.	.
scaffold1189	subtractBed	intrn	780785	780817	.	+	.	Parent=CGI_10023833;
	scaffold1189	TRF	Tandem_Repeat	780785	780817	66	+	.	.
scaffold1189	subtractBed	intrn	797137	797336	.	+	.	Parent=CGI_10023835;
	scaffold1189	TRF	Tandem_Repeat	797137	797336	204	+	.	.
scaffold1189	subtractBed	intrn	806741	806864	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	806741	806864	88	+	.	.
scaffold1189	subtractBed	intrn	806741	806842	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	806741	806842	62	+	.	.
scaffold1189	subtractBed	intrn	806836	807000	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	806836	807000	99	+	.	.
scaffold1189	subtractBed	intrn	806965	807053	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	806965	807053	124	+	.	.
scaffold1189	subtractBed	intrn	823622	823652	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	823622	823652	62	+	.	.
scaffold1189	subtractBed	intrn	819138	819218	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	819138	819218	72	+	.	.
scaffold1189	subtractBed	intrn	818996	819222	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	818996	819222	325	+	.	.
scaffold1189	subtractBed	intrn	836049	836182	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	836049	836182	205	+	.	.
scaffold1189	subtractBed	intrn	837773	837870	.	+	.	Parent=CGI_10023836;
	scaffold1189	TRF	Tandem_Repeat	837773	837870	117	+	.	.
scaffold1189	subtractBed	intrn	847842	848069	.	+	.	Parent=CGI_10023837;
	scaffold1189	WUBlastX	LINE_CR1-L2	847842	848069	93	-	.	.
scaffold1189	subtractBed	intrn	847758	848105	.	+	.	Parent=CGI_10023837;
	scaffold1189	WUBlastX	LINE_CR1-L2	847758	848105	64	-	.	.
scaffold1189	subtractBed	intrn	848087	848128	.	+	.	Parent=CGI_10023837;
	scaffold1189	WUBlastX	LINE_CR1-L2	848087	848128	42	-	.	.
scaffold1189	subtractBed	intrn	847815	848105	.	+	.	Parent=CGI_10023837;
	scaffold1189	WUBlastX	LINE_CR1-L2	847815	848105	78	-	.	.
scaffold1191	subtractBed	intrn	73854	74585	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	73854	74585	85	-	.	.
scaffold1191	subtractBed	intrn	74823	75002	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	74823	75002	48	-	.	.
scaffold1191	subtractBed	intrn	77269	77529	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_MuDR	77269	77529	91	-	.	.
scaffold1191	subtractBed	intrn	76952	77119	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	76952	77119	101	-	.	.
scaffold1191	subtractBed	intrn	77314	77529	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	77314	77529	96	-	.	.
scaffold1191	subtractBed	intrn	77532	77597	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	77532	77597	51	-	.	.
scaffold1191	subtractBed	intrn	78155	78182	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	DNA_NOF	78155	78322	59	-	.	.
scaffold1191	subtractBed	intrn	79045	79567	.	-	.	Parent=CGI_10005211;
	scaffold1191	TRF	Tandem_Repeat	79045	79567	775	+	.	.
scaffold1191	subtractBed	intrn	86896	86929	.	-	.	Parent=CGI_10005211;
	scaffold1191	TRF	Tandem_Repeat	86896	86929	52	+	.	.
scaffold1191	subtractBed	intrn	85005	85382	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	LTR_DIRS?	85005	85382	132	-	.	.
scaffold1191	subtractBed	intrn	84999	85310	.	-	.	Parent=CGI_10005211;
	scaffold1191	WUBlastX	LTR_DIRS	84999	85310	238	-	.	.
scaffold1191	subtractBed	intrn	89813	89860	.	+	.	Parent=CGI_10005212;
	scaffold1191	TRF	Tandem_Repeat	89813	89860	96	+	.	.
scaffold1191	subtractBed	intrn	94634	94677	.	+	.	Parent=CGI_10005212;
	scaffold1191	TRF	Tandem_Repeat	94634	94677	81	+	.	.
scaffold1191	subtractBed	intrn	96333	96360	.	+	.	Parent=CGI_10005212;
	scaffold1191	TRF	Tandem_Repeat	96333	96360	56	+	.	.
scaffold1191	subtractBed	intrn	93695	93928	.	+	.	Parent=CGI_10005212;
	scaffold1191	WUBlastX	LINE_RTE-X	93695	93928	83	+	.	.
scaffold1191	subtractBed	intrn	93749	93898	.	+	.	Parent=CGI_10005212;
	scaffold1191	WUBlastX	LINE_RTE-X	93749	93898	98	+	.	.
scaffold1195	subtractBed	intrn	23869	23902	.	-	.	Parent=CGI_10012091;
	scaffold1195	TRF	Tandem_Repeat	23869	23902	68	+	.	.
scaffold1195	subtractBed	intrn	23943	23988	.	-	.	Parent=CGI_10012091;
	scaffold1195	TRF	Tandem_Repeat	23943	23988	92	+	.	.
scaffold1195	subtractBed	intrn	28686	28728	.	+	.	Parent=CGI_10012092;
	scaffold1195	TRF	Tandem_Repeat	28686	28728	68	+	.	.
scaffold1195	subtractBed	intrn	35779	35814	.	+	.	Parent=CGI_10012092;
	scaffold1195	TRF	Tandem_Repeat	35779	35814	72	+	.	.
scaffold1195	subtractBed	intrn	54612	54661	.	+	.	Parent=CGI_10012094;
	scaffold1195	TRF	Tandem_Repeat	54612	54661	57	+	.	.
scaffold1195	subtractBed	intrn	59050	59223	.	+	.	Parent=CGI_10012094;
	scaffold1195	WUBlastX	DNA_Zator	59050	59223	54	+	.	.
scaffold1195	subtractBed	intrn	59486	59539	.	+	.	Parent=CGI_10012094;
	scaffold1195	WUBlastX	DNA_Zator	59486	59539	29	+	.	.
scaffold1195	subtractBed	intrn	71367	71448	.	-	.	Parent=CGI_10012095;
	scaffold1195	TRF	Tandem_Repeat	71367	71448	86	+	.	.
scaffold1195	subtractBed	intrn	76751	76882	.	+	.	Parent=CGI_10012096;
	scaffold1195	TRF	Tandem_Repeat	76751	76882	168	+	.	.
scaffold1195	subtractBed	intrn	76751	76854	.	+	.	Parent=CGI_10012096;
	scaffold1195	TRF	Tandem_Repeat	76751	76854	187	+	.	.
scaffold1195	subtractBed	intrn	76751	76876	.	+	.	Parent=CGI_10012096;
	scaffold1195	TRF	Tandem_Repeat	76751	76876	96	+	.	.
scaffold1195	subtractBed	intrn	137178	137274	.	+	.	Parent=CGI_10012098;
	scaffold1195	TRF	Tandem_Repeat	137178	137274	151	+	.	.
scaffold1195	subtractBed	intrn	254802	255111	.	-	.	Parent=CGI_10012100;
	scaffold1195	TRF	Tandem_Repeat	254802	255111	333	+	.	.
scaffold1195	subtractBed	intrn	260101	260138	.	-	.	Parent=CGI_10012100;
	scaffold1195	TRF	Tandem_Repeat	260101	260138	58	+	.	.
scaffold1195	subtractBed	intrn	291075	291139	.	-	.	Parent=CGI_10012102;
	scaffold1195	WUBlastX	LINE_L2	290501	291139	46	-	.	.
scaffold1199	subtractBed	intrn	46728	46742	.	-	.	Parent=CGI_10005923;
	scaffold1199	WUBlastX	RC_Helitron	46728	46946	48	-	.	.
scaffold1199	subtractBed	intrn	47715	47879	.	-	.	Parent=CGI_10005923;
	scaffold1199	WUBlastX	RC_Helitron	47715	47879	35	-	.	.
scaffold1199	subtractBed	intrn	48449	49108	.	-	.	Parent=CGI_10005923;
	scaffold1199	WUBlastX	DNA_Kolobok	48449	49108	67	-	.	.
scaffold1199	subtractBed	intrn	47908	48087	.	-	.	Parent=CGI_10005923;
	scaffold1199	WUBlastX	RC_Helitron	47908	48087	29	-	.	.
scaffold1199	subtractBed	intrn	52606	52663	.	-	.	Parent=CGI_10005924;
	scaffold1199	TRF	Tandem_Repeat	52606	52663	116	+	.	.
scaffold1199	subtractBed	intrn	106604	107008	.	+	.	Parent=CGI_10005927;
	scaffold1199	WUBlastX	DNA_IS4EU	106604	107008	62	+	.	.
scaffold1199	subtractBed	intrn	122042	122097	.	-	.	Parent=CGI_10005928;
	scaffold1199	TRF	Tandem_Repeat	122042	122097	112	+	.	.
scaffold1199	subtractBed	intrn	133279	133315	.	+	.	Parent=CGI_10005931;
	scaffold1199	TRF	Tandem_Repeat	133279	133315	74	+	.	.
scaffold12	subtractBed	intrn	2561	2614	.	+	.	Parent=CGI_10018011;
	scaffold12	TRF	Tandem_Repeat	2561	2614	99	+	.	.
scaffold12	subtractBed	intrn	3359	3571	.	+	.	Parent=CGI_10018011;
	scaffold12	WUBlastX	DNA_hAT-hATw	3359	3571	60	-	.	.
scaffold12	subtractBed	intrn	3634	4122	.	+	.	Parent=CGI_10018011;
	scaffold12	WUBlastX	DNA_hAT-hATw	3634	4122	43	-	.	.
scaffold12	subtractBed	intrn	3252	3350	.	+	.	Parent=CGI_10018011;
	scaffold12	WUBlastX	DNA_hAT-hATw	3252	3350	24	-	.	.
scaffold12	subtractBed	intrn	3240	3329	.	+	.	Parent=CGI_10018011;
	scaffold12	WUBlastX	DNA_hAT-hATw	3240	3329	27	-	.	.
scaffold12	subtractBed	intrn	3715	4314	.	+	.	Parent=CGI_10018011;
	scaffold12	WUBlastX	DNA_hAT-hATw	3715	4314	39	-	.	.
scaffold12	subtractBed	intrn	64078	64112	.	-	.	Parent=CGI_10018015;
	scaffold12	TRF	Tandem_Repeat	64078	64112	61	+	.	.
scaffold12	subtractBed	intrn	112711	112760	.	+	.	Parent=CGI_10018022;
	scaffold12	TRF	Tandem_Repeat	112711	112760	100	+	.	.
scaffold12	subtractBed	intrn	132367	132686	.	+	.	Parent=CGI_10018024;
	scaffold12	TRF	Tandem_Repeat	132367	132686	277	+	.	.
scaffold12	subtractBed	intrn	132367	132686	.	+	.	Parent=CGI_10018024;
	scaffold12	TRF	Tandem_Repeat	132367	132686	326	+	.	.
scaffold12	subtractBed	intrn	178614	179015	.	+	.	Parent=CGI_10018029;
	scaffold12	TRF	Tandem_Repeat	178614	179015	313	+	.	.
scaffold12	subtractBed	intrn	178614	178999	.	+	.	Parent=CGI_10018029;
	scaffold12	TRF	Tandem_Repeat	178614	178999	376	+	.	.
scaffold12	subtractBed	intrn	184449	184770	.	+	.	Parent=CGI_10018029;
	scaffold12	TRF	Tandem_Repeat	184436	184770	445	+	.	.
scaffold12	subtractBed	intrn	241874	241906	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	241874	241906	66	+	.	.
scaffold12	subtractBed	intrn	242177	242826	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	242177	242826	799	+	.	.
scaffold12	subtractBed	intrn	242837	242907	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	242837	242907	97	+	.	.
scaffold12	subtractBed	intrn	242834	242908	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	242834	242908	69	+	.	.
scaffold12	subtractBed	intrn	243698	243765	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	243698	243765	118	+	.	.
scaffold12	subtractBed	intrn	243893	243962	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	243893	243962	124	+	.	.
scaffold12	subtractBed	intrn	244002	244365	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	244002	244365	427	+	.	.
scaffold12	subtractBed	intrn	245476	245535	.	+	.	Parent=CGI_10018033;
	scaffold12	TRF	Tandem_Repeat	245476	245535	111	+	.	.
scaffold12	subtractBed	intrn	292426	292456	.	-	.	Parent=CGI_10018039;
	scaffold12	TRF	Tandem_Repeat	292426	292456	62	+	.	.
scaffold12	subtractBed	intrn	292296	292296	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	292114	292296	39	-	.	.
scaffold12	subtractBed	intrn	293491	293558	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	293491	293694	34	-	.	.
scaffold12	subtractBed	intrn	293557	293558	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	293557	293745	24	-	.	.
scaffold12	subtractBed	intrn	293704	293745	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	293557	293745	24	-	.	.
scaffold12	subtractBed	intrn	294404	294405	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	294404	294574	23	-	.	.
scaffold12	subtractBed	intrn	295322	295323	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	295322	295633	65	-	.	.
scaffold12	subtractBed	intrn	295612	295633	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	295322	295633	65	-	.	.
scaffold12	subtractBed	intrn	302321	302506	.	-	.	Parent=CGI_10018039;
	scaffold12	TRF	Tandem_Repeat	302321	302506	311	+	.	.
scaffold12	subtractBed	intrn	307677	307892	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	307677	307892	48	-	.	.
scaffold12	subtractBed	intrn	308751	308921	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	308751	308921	20	-	.	.
scaffold12	subtractBed	intrn	309316	309420	.	-	.	Parent=CGI_10018039;
	scaffold12	WUBlastX	LTR_Gypsy	309316	309420	33	-	.	.
scaffold12	subtractBed	intrn	319945	319981	.	+	.	Parent=CGI_10018041;
	scaffold12	TRF	Tandem_Repeat	319945	319981	74	+	.	.
scaffold12	subtractBed	intrn	328439	328483	.	+	.	Parent=CGI_10018042;
	scaffold12	TRF	Tandem_Repeat	328439	328483	81	+	.	.
scaffold12	subtractBed	intrn	336484	336567	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	336484	336567	22	+	.	.
scaffold12	subtractBed	intrn	339343	339486	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	339343	339486	24	+	.	.
scaffold12	subtractBed	intrn	340896	340908	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	340896	341039	29	+	.	.
scaffold12	subtractBed	intrn	341025	341039	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	340896	341039	29	+	.	.
scaffold12	subtractBed	intrn	343561	343561	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	343561	343653	30	+	.	.
scaffold12	subtractBed	intrn	343652	343653	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	343561	343653	30	+	.	.
scaffold12	subtractBed	intrn	344503	344509	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	344503	344856	58	+	.	.
scaffold12	subtractBed	intrn	344786	344856	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	344503	344856	58	+	.	.
scaffold12	subtractBed	intrn	345338	345341	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	345338	345514	20	+	.	.
scaffold12	subtractBed	intrn	345513	345514	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	345338	345514	20	+	.	.
scaffold12	subtractBed	intrn	350362	350619	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	350362	350619	28	+	.	.
scaffold12	subtractBed	intrn	351109	351109	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	351109	351246	29	+	.	.
scaffold12	subtractBed	intrn	351628	351628	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	351628	351786	31	+	.	.
scaffold12	subtractBed	intrn	351245	351246	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	351109	351246	29	+	.	.
scaffold12	subtractBed	intrn	351245	351246	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	351148	351246	35	+	.	.
scaffold12	subtractBed	intrn	351782	351786	.	+	.	Parent=CGI_10018042;
	scaffold12	WUBlastX	LTR_Gypsy	351628	351786	31	+	.	.
scaffold12	subtractBed	intrn	358133	358187	.	-	.	Parent=CGI_10018043;
	scaffold12	TRF	Tandem_Repeat	358133	358187	110	+	.	.
scaffold12	subtractBed	intrn	359420	359817	.	-	.	Parent=CGI_10018043;
	scaffold12	TRF	Tandem_Repeat	359420	359817	565	+	.	.
scaffold12	subtractBed	intrn	359420	359817	.	-	.	Parent=CGI_10018043;
	scaffold12	TRF	Tandem_Repeat	359420	359817	633	+	.	.
scaffold12	subtractBed	intrn	384204	384228	.	-	.	Parent=CGI_10018044;
	scaffold12	TRF	Tandem_Repeat	384204	384228	50	+	.	.
scaffold12	subtractBed	intrn	389596	389656	.	-	.	Parent=CGI_10018045;
	scaffold12	TRF	Tandem_Repeat	389596	389656	122	+	.	.
scaffold12	subtractBed	intrn	414934	415268	.	-	.	Parent=CGI_10018047;
	scaffold12	TRF	Tandem_Repeat	414934	415268	519	+	.	.
scaffold12	subtractBed	intrn	416644	416683	.	-	.	Parent=CGI_10018047;
	scaffold12	TRF	Tandem_Repeat	416644	416683	80	+	.	.
scaffold12	subtractBed	intrn	417885	418861	.	-	.	Parent=CGI_10018047;
	scaffold12	TRF	Tandem_Repeat	417885	418873	1627	+	.	.
scaffold12	subtractBed	intrn	437974	438016	.	+	.	Parent=CGI_10018049;
	scaffold12	TRF	Tandem_Repeat	437974	438016	79	+	.	.
scaffold12	subtractBed	intrn	440459	440497	.	+	.	Parent=CGI_10018049;
	scaffold12	TRF	Tandem_Repeat	440459	440497	78	+	.	.
scaffold12	subtractBed	intrn	461393	461428	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	461393	461428	72	+	.	.
scaffold12	subtractBed	intrn	469094	469134	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	469094	469134	82	+	.	.
scaffold12	subtractBed	intrn	470452	470800	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	470452	470800	309	+	.	.
scaffold12	subtractBed	intrn	470454	470800	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	470454	470800	291	+	.	.
scaffold12	subtractBed	intrn	470452	470738	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	470452	470738	251	+	.	.
scaffold12	subtractBed	intrn	491615	492741	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	491615	492741	1641	+	.	.
scaffold12	subtractBed	intrn	492765	492798	.	-	.	Parent=CGI_10018051;
	scaffold12	TRF	Tandem_Repeat	492765	492798	50	+	.	.
scaffold12	subtractBed	intrn	531705	532138	.	-	.	Parent=CGI_10018053;
	scaffold12	TRF	Tandem_Repeat	531705	532138	455	+	.	.
scaffold12	subtractBed	intrn	531885	532109	.	-	.	Parent=CGI_10018053;
	scaffold12	TRF	Tandem_Repeat	531885	532109	91	+	.	.
scaffold120	subtractBed	intrn	29671	29736	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	29671	29736	114	+	.	.
scaffold120	subtractBed	intrn	36078	36139	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	36078	36139	61	+	.	.
scaffold120	subtractBed	intrn	39597	39631	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	39597	39631	70	+	.	.
scaffold120	subtractBed	intrn	40402	40456	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	40402	40456	110	+	.	.
scaffold120	subtractBed	intrn	40713	41907	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	40713	41907	1493	+	.	.
scaffold120	subtractBed	intrn	42885	43260	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	42885	43260	556	+	.	.
scaffold120	subtractBed	intrn	46498	46819	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	46498	46819	350	+	.	.
scaffold120	subtractBed	intrn	46498	46825	.	+	.	Parent=CGI_10017521;
	scaffold120	TRF	Tandem_Repeat	46498	46825	333	+	.	.
scaffold120	subtractBed	intrn	51329	51372	.	+	.	Parent=CGI_10017522;
	scaffold120	TRF	Tandem_Repeat	51329	51372	52	+	.	.
scaffold120	subtractBed	intrn	57780	57995	.	+	.	Parent=CGI_10017522;
	scaffold120	TRF	Tandem_Repeat	57780	57995	360	+	.	.
scaffold120	subtractBed	intrn	198046	198667	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	198046	198667	796	+	.	.
scaffold120	subtractBed	intrn	198046	198667	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	198046	198667	857	+	.	.
scaffold120	subtractBed	intrn	196098	196839	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	196098	196839	982	+	.	.
scaffold120	subtractBed	intrn	196098	196839	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	196098	196839	978	+	.	.
scaffold120	subtractBed	intrn	208025	208052	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	208025	208052	56	+	.	.
scaffold120	subtractBed	intrn	215211	215489	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	215211	215489	341	+	.	.
scaffold120	subtractBed	intrn	216035	217906	.	-	.	Parent=CGI_10017534;
	scaffold120	TRF	Tandem_Repeat	216020	217906	3486	+	.	.
scaffold120	subtractBed	intrn	220071	220136	.	-	.	Parent=CGI_10017534;
	scaffold120	WUBlastX	DNA_Crypton	220071	220136	22	-	.	.
scaffold120	subtractBed	intrn	219356	219910	.	-	.	Parent=CGI_10017534;
	scaffold120	WUBlastX	DNA_Crypton	219356	219910	117	-	.	.
scaffold120	subtractBed	intrn	220262	220918	.	-	.	Parent=CGI_10017534;
	scaffold120	WUBlastX	DNA_Crypton	220262	220918	244	-	.	.
scaffold120	subtractBed	intrn	236663	236688	.	-	.	Parent=CGI_10017535;
	scaffold120	TRF	Tandem_Repeat	236663	236688	52	+	.	.
scaffold120	subtractBed	intrn	237022	237071	.	-	.	Parent=CGI_10017535;
	scaffold120	TRF	Tandem_Repeat	237022	237071	91	+	.	.
scaffold120	subtractBed	intrn	238599	238637	.	-	.	Parent=CGI_10017535;
	scaffold120	TRF	Tandem_Repeat	238599	238637	78	+	.	.
scaffold120	subtractBed	intrn	238744	238778	.	-	.	Parent=CGI_10017535;
	scaffold120	TRF	Tandem_Repeat	238744	238778	70	+	.	.
scaffold120	subtractBed	intrn	258955	260051	.	+	.	Parent=CGI_10017537;
	scaffold120	TRF	Tandem_Repeat	258933	260051	1487	+	.	.
scaffold120	subtractBed	intrn	266483	266704	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	266461	266704	218	+	.	.
scaffold120	subtractBed	intrn	273885	273935	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	273885	273935	57	+	.	.
scaffold120	subtractBed	intrn	283525	283553	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	283525	283553	58	+	.	.
scaffold120	subtractBed	intrn	284840	285116	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	284840	285116	374	+	.	.
scaffold120	subtractBed	intrn	290001	290086	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	290001	290086	118	+	.	.
scaffold120	subtractBed	intrn	291694	291860	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	291694	291860	100	+	.	.
scaffold120	subtractBed	intrn	291749	291860	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	291749	291860	188	+	.	.
scaffold120	subtractBed	intrn	305656	305843	.	-	.	Parent=CGI_10017538;
	scaffold120	TRF	Tandem_Repeat	305656	305843	112	+	.	.
scaffold120	subtractBed	intrn	325733	325893	.	-	.	Parent=CGI_10017539;
	scaffold120	TRF	Tandem_Repeat	325733	325893	178	+	.	.
scaffold120	subtractBed	intrn	325899	326105	.	-	.	Parent=CGI_10017539;
	scaffold120	TRF	Tandem_Repeat	325899	326105	145	+	.	.
scaffold120	subtractBed	intrn	326191	326277	.	-	.	Parent=CGI_10017539;
	scaffold120	TRF	Tandem_Repeat	326191	326277	104	+	.	.
scaffold120	subtractBed	intrn	340615	340723	.	-	.	Parent=CGI_10017539;
	scaffold120	TRF	Tandem_Repeat	340615	340723	62	+	.	.
scaffold120	subtractBed	intrn	349949	350007	.	-	.	Parent=CGI_10017539;
	scaffold120	TRF	Tandem_Repeat	349949	350007	109	+	.	.
scaffold120	subtractBed	intrn	392027	392077	.	-	.	Parent=CGI_10017543;
	scaffold120	TRF	Tandem_Repeat	392027	392077	102	+	.	.
scaffold120	subtractBed	intrn	400925	401165	.	+	.	Parent=CGI_10017544;
	scaffold120	TRF	Tandem_Repeat	400925	401165	228	+	.	.
scaffold120	subtractBed	intrn	440048	440179	.	-	.	Parent=CGI_10017547;
	scaffold120	TRF	Tandem_Repeat	440048	440179	183	+	.	.
scaffold120	subtractBed	intrn	440048	440208	.	-	.	Parent=CGI_10017547;
	scaffold120	TRF	Tandem_Repeat	440048	440208	176	+	.	.
scaffold120	subtractBed	intrn	492991	493599	.	+	.	Parent=CGI_10017550;
	scaffold120	WUBlastX	RC_Helitron	492991	493599	70	+	.	.
scaffold120	subtractBed	intrn	496512	496547	.	+	.	Parent=CGI_10017550;
	scaffold120	TRF	Tandem_Repeat	496512	496547	63	+	.	.
scaffold120	subtractBed	intrn	500774	501741	.	-	.	Parent=CGI_10017551;
	scaffold120	TRF	Tandem_Repeat	500774	501741	1524	+	.	.
scaffold1200	subtractBed	intrn	3503	3659	.	-	.	Parent=CGI_10007614;
	scaffold1200	TRF	Tandem_Repeat	3503	3659	143	+	.	.
scaffold1200	subtractBed	intrn	6758	6786	.	-	.	Parent=CGI_10007614;
	scaffold1200	TRF	Tandem_Repeat	6758	6786	51	+	.	.
scaffold1200	subtractBed	intrn	114700	115593	.	+	.	Parent=CGI_10007620;
	scaffold1200	TRF	Tandem_Repeat	114700	115593	1068	+	.	.
scaffold1200	subtractBed	intrn	151663	151689	.	+	.	Parent=CGI_10007621;
	scaffold1200	TRF	Tandem_Repeat	151663	151689	54	+	.	.
scaffold1200	subtractBed	intrn	155672	155730	.	+	.	Parent=CGI_10007621;
	scaffold1200	TRF	Tandem_Repeat	155672	155730	118	+	.	.
scaffold1200	subtractBed	intrn	156223	156259	.	+	.	Parent=CGI_10007621;
	scaffold1200	TRF	Tandem_Repeat	156223	156259	74	+	.	.
scaffold1200	subtractBed	intrn	164405	164406	.	-	.	Parent=CGI_10007622;
	scaffold1200	WUBlastX	DNA_IS4EU	164405	164557	52	-	.	.
scaffold1203	subtractBed	intrn	19160	19359	.	-	.	Parent=CGI_10010417;
	scaffold1203	TRF	Tandem_Repeat	19160	19359	140	+	.	.
scaffold1203	subtractBed	intrn	19111	19280	.	-	.	Parent=CGI_10010417;
	scaffold1203	TRF	Tandem_Repeat	19111	19280	101	+	.	.
scaffold1203	subtractBed	intrn	20252	21018	.	-	.	Parent=CGI_10010417;
	scaffold1203	TRF	Tandem_Repeat	20252	21018	938	+	.	.
scaffold1203	subtractBed	intrn	21130	21161	.	-	.	Parent=CGI_10010417;
	scaffold1203	TRF	Tandem_Repeat	21130	21161	55	+	.	.
scaffold1203	subtractBed	intrn	96821	97435	.	+	.	Parent=CGI_10010424;
	scaffold1203	WUBlastX	LINE_R2-Hero	96821	97435	67	+	.	.
scaffold1203	subtractBed	intrn	97426	97500	.	+	.	Parent=CGI_10010424;
	scaffold1203	WUBlastX	LINE_R2-Hero	97426	97500	53	+	.	.
scaffold1203	subtractBed	intrn	98076	98174	.	+	.	Parent=CGI_10010424;
	scaffold1203	WUBlastX	LINE_R2-Hero	98076	98174	43	+	.	.
scaffold1203	subtractBed	intrn	106773	106827	.	-	.	Parent=CGI_10010425;
	scaffold1203	TRF	Tandem_Repeat	106773	106827	83	+	.	.
scaffold1203	subtractBed	intrn	106901	106938	.	-	.	Parent=CGI_10010425;
	scaffold1203	TRF	Tandem_Repeat	106901	106938	76	+	.	.
scaffold1203	subtractBed	intrn	108401	108476	.	-	.	Parent=CGI_10010425;
	scaffold1203	TRF	Tandem_Repeat	108401	108476	86	+	.	.
scaffold1203	subtractBed	intrn	108400	108479	.	-	.	Parent=CGI_10010425;
	scaffold1203	TRF	Tandem_Repeat	108400	108479	90	+	.	.
scaffold1203	subtractBed	intrn	108401	108477	.	-	.	Parent=CGI_10010425;
	scaffold1203	TRF	Tandem_Repeat	108401	108477	84	+	.	.
scaffold1203	subtractBed	intrn	124561	124693	.	+	.	Parent=CGI_10010427;
	scaffold1203	TRF	Tandem_Repeat	124561	124693	119	+	.	.
scaffold1203	subtractBed	intrn	126082	126559	.	+	.	Parent=CGI_10010427;
	scaffold1203	TRF	Tandem_Repeat	126018	126559	798	+	.	.
scaffold1203	subtractBed	intrn	126562	126859	.	+	.	Parent=CGI_10010427;
	scaffold1203	TRF	Tandem_Repeat	126562	126859	311	+	.	.
scaffold1203	subtractBed	intrn	132620	132665	.	+	.	Parent=CGI_10010427;
	scaffold1203	TRF	Tandem_Repeat	132620	132665	58	+	.	.
scaffold1203	subtractBed	intrn	134260	135582	.	+	.	Parent=CGI_10010427;
	scaffold1203	TRF	Tandem_Repeat	134260	135582	2265	+	.	.
scaffold1203	subtractBed	intrn	201987	202031	.	+	.	Parent=CGI_10010435;
	scaffold1203	TRF	Tandem_Repeat	201987	202031	90	+	.	.
scaffold1203	subtractBed	intrn	202054	202094	.	+	.	Parent=CGI_10010435;
	scaffold1203	TRF	Tandem_Repeat	202054	202094	82	+	.	.
scaffold1203	subtractBed	intrn	256022	256133	.	-	.	Parent=CGI_10010438;
	scaffold1203	TRF	Tandem_Repeat	256022	256133	54	+	.	.
scaffold1203	subtractBed	intrn	256063	256212	.	-	.	Parent=CGI_10010438;
	scaffold1203	TRF	Tandem_Repeat	256063	256212	58	+	.	.
scaffold1203	subtractBed	intrn	262138	262183	.	-	.	Parent=CGI_10010438;
	scaffold1203	TRF	Tandem_Repeat	262138	262183	58	+	.	.
scaffold1204	subtractBed	intrn	37639	37728	.	-	.	Parent=CGI_10009804;
	scaffold1204	WUBlastX	LTR_Pao	37639	37728	23	+	.	.
scaffold1204	subtractBed	intrn	38431	38574	.	-	.	Parent=CGI_10009804;
	scaffold1204	WUBlastX	LTR_Pao	38424	40016	491	+	.	.
scaffold1204	subtractBed	intrn	67389	67420	.	-	.	Parent=CGI_10009807;
	scaffold1204	TRF	Tandem_Repeat	67389	67420	55	+	.	.
scaffold1204	subtractBed	intrn	160068	160137	.	-	.	Parent=CGI_10009812;
	scaffold1204	TRF	Tandem_Repeat	160068	160137	117	+	.	.
scaffold1204	subtractBed	intrn	160229	160272	.	-	.	Parent=CGI_10009812;
	scaffold1204	TRF	Tandem_Repeat	160229	160272	88	+	.	.
scaffold1204	subtractBed	intrn	168565	168636	.	-	.	Parent=CGI_10009813;
	scaffold1204	TRF	Tandem_Repeat	168565	168636	144	+	.	.
scaffold1204	subtractBed	intrn	184885	185052	.	-	.	Parent=CGI_10009814;
	scaffold1204	TRF	Tandem_Repeat	184885	185084	337	+	.	.
scaffold1204	subtractBed	intrn	199945	201279	.	-	.	Parent=CGI_10009814;
	scaffold1204	TRF	Tandem_Repeat	199945	201279	1952	+	.	.
scaffold1204	subtractBed	intrn	201449	201486	.	-	.	Parent=CGI_10009814;
	scaffold1204	TRF	Tandem_Repeat	201449	201486	58	+	.	.
scaffold1205	subtractBed	intrn	109767	109895	.	-	.	Parent=CGI_10004904;
	scaffold1205	WUBlastX	DNA_Crypton	109767	109997	90	+	.	.
scaffold1205	subtractBed	intrn	109567	109734	.	-	.	Parent=CGI_10004904;
	scaffold1205	WUBlastX	DNA_Crypton	109567	109734	22	+	.	.
scaffold1205	subtractBed	intrn	110065	110244	.	-	.	Parent=CGI_10004904;
	scaffold1205	WUBlastX	DNA_Crypton	110065	110244	71	+	.	.
scaffold1206	subtractBed	intrn	25221	26286	.	+	.	Parent=CGI_10002106;
	scaffold1206	TRF	Tandem_Repeat	25221	26286	1204	+	.	.
scaffold1206	subtractBed	intrn	35428	35429	.	-	.	Parent=CGI_10002107;
	scaffold1206	TRF	Tandem_Repeat	35358	35429	72	+	.	.
scaffold1209	subtractBed	intrn	18907	18960	.	-	.	Parent=CGI_10007964;
	scaffold1209	TRF	Tandem_Repeat	18907	18960	73	+	.	.
scaffold1209	subtractBed	intrn	18910	18959	.	-	.	Parent=CGI_10007964;
	scaffold1209	TRF	Tandem_Repeat	18910	18959	57	+	.	.
scaffold1209	subtractBed	intrn	20840	21403	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_L1	20840	21403	65	-	.	.
scaffold1209	subtractBed	intrn	20640	20810	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_L1	20640	20810	99	-	.	.
scaffold1209	subtractBed	intrn	20229	20642	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_RTE-X	20229	20642	45	-	.	.
scaffold1209	subtractBed	intrn	20117	20191	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_RTE-X	20117	20191	27	-	.	.
scaffold1209	subtractBed	intrn	20265	20609	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_RTE-X	20265	20609	99	-	.	.
scaffold1209	subtractBed	intrn	20810	21298	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_L2	20810	21298	122	-	.	.
scaffold1209	subtractBed	intrn	26308	27849	.	-	.	Parent=CGI_10007964;
	scaffold1209	WUBlastX	LINE_L1-Tx1	26308	27849	369	-	.	.
scaffold1209	subtractBed	intrn	112071	112589	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	DNA_En-Spm	112071	112589	250	+	.	.
scaffold1209	subtractBed	intrn	118920	119602	.	-	.	Parent=CGI_10007967;
	scaffold1209	TRF	Tandem_Repeat	118920	119602	969	+	.	.
scaffold1209	subtractBed	intrn	121094	121453	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	DNA_MuDR	121094	121453	58	-	.	.
scaffold1209	subtractBed	intrn	121133	121561	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	DNA_MuDR	121133	121561	45	-	.	.
scaffold1209	subtractBed	intrn	121891	121893	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	DNA_MuDR	121891	122082	52	-	.	.
scaffold1209	subtractBed	intrn	117200	118390	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	LTR_Gypsy	117200	118390	461	-	.	.
scaffold1209	subtractBed	intrn	122074	122082	.	-	.	Parent=CGI_10007967;
	scaffold1209	WUBlastX	DNA_MuDR	121891	122082	52	-	.	.
scaffold121	subtractBed	intrn	9022	9158	.	+	.	Parent=CGI_10025630;
	scaffold121	TRF	Tandem_Repeat	9022	9158	213	+	.	.
scaffold121	subtractBed	intrn	25487	27198	.	+	.	Parent=CGI_10025631;
	scaffold121	TRF	Tandem_Repeat	25487	27198	2309	+	.	.
scaffold121	subtractBed	intrn	46645	46873	.	+	.	Parent=CGI_10025633;
	scaffold121	TRF	Tandem_Repeat	46645	46873	156	+	.	.
scaffold121	subtractBed	intrn	46645	46873	.	+	.	Parent=CGI_10025633;
	scaffold121	TRF	Tandem_Repeat	46645	46873	188	+	.	.
scaffold121	subtractBed	intrn	47200	47286	.	+	.	Parent=CGI_10025633;
	scaffold121	TRF	Tandem_Repeat	47200	47286	102	+	.	.
scaffold121	subtractBed	intrn	49297	49326	.	+	.	Parent=CGI_10025633;
	scaffold121	TRF	Tandem_Repeat	49297	49326	60	+	.	.
scaffold121	subtractBed	intrn	49340	49372	.	+	.	Parent=CGI_10025633;
	scaffold121	TRF	Tandem_Repeat	49340	49372	57	+	.	.
scaffold121	subtractBed	intrn	64168	64225	.	-	.	Parent=CGI_10025634;
	scaffold121	TRF	Tandem_Repeat	64168	64225	116	+	.	.
scaffold121	subtractBed	intrn	68895	69043	.	-	.	Parent=CGI_10025634;
	scaffold121	TRF	Tandem_Repeat	68895	69043	160	+	.	.
scaffold121	subtractBed	intrn	102941	102974	.	-	.	Parent=CGI_10025636;
	scaffold121	TRF	Tandem_Repeat	102941	102974	50	+	.	.
scaffold121	subtractBed	intrn	149340	149466	.	-	.	Parent=CGI_10025637;
	scaffold121	TRF	Tandem_Repeat	149340	149466	98	+	.	.
scaffold121	subtractBed	intrn	153227	153265	.	-	.	Parent=CGI_10025637;
	scaffold121	TRF	Tandem_Repeat	153227	153265	78	+	.	.
scaffold121	subtractBed	intrn	159616	159737	.	+	.	Parent=CGI_10025638;
	scaffold121	TRF	Tandem_Repeat	159616	159737	156	+	.	.
scaffold121	subtractBed	intrn	188431	188684	.	-	.	Parent=CGI_10025639;
	scaffold121	TRF	Tandem_Repeat	188431	188684	203	+	.	.
scaffold121	subtractBed	intrn	193091	193131	.	+	.	Parent=CGI_10025640;
	scaffold121	TRF	Tandem_Repeat	193091	193131	82	+	.	.
scaffold121	subtractBed	intrn	193836	193909	.	+	.	Parent=CGI_10025640;
	scaffold121	TRF	Tandem_Repeat	193836	193909	148	+	.	.
scaffold121	subtractBed	intrn	196935	197022	.	+	.	Parent=CGI_10025640;
	scaffold121	TRF	Tandem_Repeat	196935	197022	126	+	.	.
scaffold121	subtractBed	intrn	200485	200578	.	+	.	Parent=CGI_10025640;
	scaffold121	TRF	Tandem_Repeat	200485	200578	64	+	.	.
scaffold121	subtractBed	intrn	200605	200654	.	+	.	Parent=CGI_10025640;
	scaffold121	TRF	Tandem_Repeat	200605	200654	100	+	.	.
scaffold121	subtractBed	intrn	356213	356818	.	-	.	Parent=CGI_10025644;
	scaffold121	WUBlastX	LINE_RTE-X	356213	356818	137	+	.	.
scaffold121	subtractBed	intrn	366366	366417	.	+	.	Parent=CGI_10025645;
	scaffold121	TRF	Tandem_Repeat	366366	366417	50	+	.	.
scaffold121	subtractBed	intrn	366368	366410	.	+	.	Parent=CGI_10025645;
	scaffold121	TRF	Tandem_Repeat	366368	366410	50	+	.	.
scaffold121	subtractBed	intrn	366422	367369	.	+	.	Parent=CGI_10025645;
	scaffold121	TRF	Tandem_Repeat	366422	367369	1304	+	.	.
scaffold121	subtractBed	intrn	375187	376246	.	+	.	Parent=CGI_10025645;
	scaffold121	TRF	Tandem_Repeat	375187	376246	1042	+	.	.
scaffold121	subtractBed	intrn	414478	414529	.	-	.	Parent=CGI_10025650;
	scaffold121	TRF	Tandem_Repeat	414478	414529	104	+	.	.
scaffold121	subtractBed	intrn	414997	415040	.	-	.	Parent=CGI_10025650;
	scaffold121	TRF	Tandem_Repeat	414997	415040	88	+	.	.
scaffold121	subtractBed	intrn	474603	474637	.	-	.	Parent=CGI_10025653;
	scaffold121	TRF	Tandem_Repeat	474603	474637	61	+	.	.
scaffold121	subtractBed	intrn	492355	492396	.	-	.	Parent=CGI_10025655;
	scaffold121	TRF	Tandem_Repeat	492355	492396	84	+	.	.
scaffold121	subtractBed	intrn	498854	498918	.	-	.	Parent=CGI_10025656;
	scaffold121	TRF	Tandem_Repeat	498854	498918	121	+	.	.
scaffold121	subtractBed	intrn	500372	500532	.	-	.	Parent=CGI_10025656;
	scaffold121	TRF	Tandem_Repeat	500372	500532	134	+	.	.
scaffold121	subtractBed	intrn	502734	502771	.	-	.	Parent=CGI_10025656;
	scaffold121	TRF	Tandem_Repeat	502734	502771	58	+	.	.
scaffold121	subtractBed	intrn	507570	507634	.	-	.	Parent=CGI_10025657;
	scaffold121	TRF	Tandem_Repeat	507570	507634	96	+	.	.
scaffold121	subtractBed	intrn	509583	509621	.	-	.	Parent=CGI_10025657;
	scaffold121	TRF	Tandem_Repeat	509583	509621	78	+	.	.
scaffold121	subtractBed	intrn	509649	510224	.	-	.	Parent=CGI_10025657;
	scaffold121	WUBlastX	LINE_L1	509649	510224	38	-	.	.
scaffold121	subtractBed	intrn	509658	510074	.	-	.	Parent=CGI_10025657;
	scaffold121	WUBlastX	LINE_L1-Tx1	509658	510074	97	-	.	.
scaffold121	subtractBed	intrn	542274	543324	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	542274	543324	1951	+	.	.
scaffold121	subtractBed	intrn	543497	543542	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	543497	543542	67	+	.	.
scaffold121	subtractBed	intrn	560717	560902	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	560717	560902	238	+	.	.
scaffold121	subtractBed	intrn	574581	574609	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	574581	574609	51	+	.	.
scaffold121	subtractBed	intrn	574581	574616	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	574581	574616	51	+	.	.
scaffold121	subtractBed	intrn	592734	592785	.	-	.	Parent=CGI_10025660;
	scaffold121	TRF	Tandem_Repeat	592734	592785	104	+	.	.
scaffold121	subtractBed	intrn	612471	613483	.	+	.	Parent=CGI_10025661;
	scaffold121	TRF	Tandem_Repeat	612471	613483	1139	+	.	.
scaffold121	subtractBed	intrn	764132	764264	.	+	.	Parent=CGI_10025674;
	scaffold121	TRF	Tandem_Repeat	764132	764264	236	+	.	.
scaffold121	subtractBed	intrn	764185	764284	.	+	.	Parent=CGI_10025674;
	scaffold121	TRF	Tandem_Repeat	764185	764284	56	+	.	.
scaffold121	subtractBed	intrn	764665	764704	.	+	.	Parent=CGI_10025674;
	scaffold121	TRF	Tandem_Repeat	764665	764704	80	+	.	.
scaffold121	subtractBed	intrn	767281	767535	.	+	.	Parent=CGI_10025674;
	scaffold121	TRF	Tandem_Repeat	767281	767535	395	+	.	.
scaffold121	subtractBed	intrn	815893	815932	.	+	.	Parent=CGI_10025678;
	scaffold121	TRF	Tandem_Repeat	815893	815932	53	+	.	.
scaffold121	subtractBed	intrn	833799	833845	.	-	.	Parent=CGI_10025680;
	scaffold121	TRF	Tandem_Repeat	833799	833845	69	+	.	.
scaffold121	subtractBed	intrn	886977	887089	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	886977	887089	65	+	.	.
scaffold121	subtractBed	intrn	887051	887309	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	887051	887309	80	+	.	.
scaffold121	subtractBed	intrn	888101	888854	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	888101	888854	1070	+	.	.
scaffold121	subtractBed	intrn	888966	888991	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	888966	888991	52	+	.	.
scaffold121	subtractBed	intrn	893831	893872	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	893831	893872	84	+	.	.
scaffold121	subtractBed	intrn	894430	894703	.	-	.	Parent=CGI_10025683;
	scaffold121	TRF	Tandem_Repeat	894430	894703	295	+	.	.
scaffold121	subtractBed	intrn	909264	909503	.	-	.	Parent=CGI_10025685;
	scaffold121	WUBlastX	LINE_R2-Hero	909264	909503	61	+	.	.
scaffold121	subtractBed	intrn	965886	965938	.	-	.	Parent=CGI_10025689;
	scaffold121	TRF	Tandem_Repeat	965886	965938	106	+	.	.
scaffold121	subtractBed	intrn	965994	966033	.	-	.	Parent=CGI_10025689;
	scaffold121	TRF	Tandem_Repeat	965994	966033	80	+	.	.
scaffold121	subtractBed	intrn	974392	974447	.	-	.	Parent=CGI_10025689;
	scaffold121	TRF	Tandem_Repeat	974392	974447	112	+	.	.
scaffold121	subtractBed	intrn	982963	983011	.	+	.	Parent=CGI_10025690;
	scaffold121	TRF	Tandem_Repeat	982963	983011	89	+	.	.
scaffold121	subtractBed	intrn	985430	985490	.	+	.	Parent=CGI_10025690;
	scaffold121	TRF	Tandem_Repeat	985430	985490	113	+	.	.
scaffold121	subtractBed	intrn	1020972	1021021	.	-	.	Parent=CGI_10025693;
	scaffold121	TRF	Tandem_Repeat	1020972	1021021	50	+	.	.
scaffold121	subtractBed	intrn	1046852	1046885	.	+	.	Parent=CGI_10025694;
	scaffold121	TRF	Tandem_Repeat	1046852	1046885	61	+	.	.
scaffold121	subtractBed	intrn	1054972	1055676	.	-	.	Parent=CGI_10025695;
	scaffold121	TRF	Tandem_Repeat	1054972	1055676	728	+	.	.
scaffold121	subtractBed	intrn	1064824	1064871	.	-	.	Parent=CGI_10025695;
	scaffold121	TRF	Tandem_Repeat	1064824	1064871	96	+	.	.
scaffold1210	subtractBed	intrn	68471	68511	.	-	.	Parent=CGI_10014597;
	scaffold1210	TRF	Tandem_Repeat	68471	68511	82	+	.	.
scaffold1210	subtractBed	intrn	70223	70850	.	-	.	Parent=CGI_10014597;
	scaffold1210	TRF	Tandem_Repeat	70223	70850	686	+	.	.
scaffold1210	subtractBed	intrn	100166	101252	.	-	.	Parent=CGI_10014599;
	scaffold1210	TRF	Tandem_Repeat	100166	101252	1574	+	.	.
scaffold1210	subtractBed	intrn	101457	101494	.	-	.	Parent=CGI_10014599;
	scaffold1210	TRF	Tandem_Repeat	101457	101494	58	+	.	.
scaffold1210	subtractBed	intrn	113033	113087	.	-	.	Parent=CGI_10014599;
	scaffold1210	TRF	Tandem_Repeat	113033	113087	110	+	.	.
scaffold1210	subtractBed	intrn	112508	112852	.	-	.	Parent=CGI_10014599;
	scaffold1210	WUBlastX	LINE_RTE-X	112508	112852	73	+	.	.
scaffold1210	subtractBed	intrn	112577	112903	.	-	.	Parent=CGI_10014599;
	scaffold1210	WUBlastX	LINE_RTE-X	112577	112903	76	+	.	.
scaffold1210	subtractBed	intrn	115123	115271	.	-	.	Parent=CGI_10014599;
	scaffold1210	TRF	Tandem_Repeat	115123	115271	87	+	.	.
scaffold1210	subtractBed	intrn	134955	135003	.	-	.	Parent=CGI_10014600;
	scaffold1210	TRF	Tandem_Repeat	134955	135003	98	+	.	.
scaffold1210	subtractBed	intrn	183070	183185	.	+	.	Parent=CGI_10014603;
	scaffold1210	TRF	Tandem_Repeat	183070	183185	160	+	.	.
scaffold1210	subtractBed	intrn	225913	225966	.	+	.	Parent=CGI_10014606;
	scaffold1210	TRF	Tandem_Repeat	225913	225966	99	+	.	.
scaffold1210	subtractBed	intrn	293877	294188	.	+	.	Parent=CGI_10014610;
	scaffold1210	WUBlastX	DNA_hAT-Ac	293877	294188	93	+	.	.
scaffold1210	subtractBed	intrn	293871	294242	.	+	.	Parent=CGI_10014610;
	scaffold1210	WUBlastX	DNA_hAT-Ac	293871	294242	72	+	.	.
scaffold1210	subtractBed	intrn	299844	299908	.	+	.	Parent=CGI_10014610;
	scaffold1210	TRF	Tandem_Repeat	299844	299908	121	+	.	.
scaffold1210	subtractBed	intrn	334981	335047	.	+	.	Parent=CGI_10014612;
	scaffold1210	TRF	Tandem_Repeat	334981	335047	125	+	.	.
scaffold1210	subtractBed	intrn	346666	346709	.	+	.	Parent=CGI_10014613;
	scaffold1210	TRF	Tandem_Repeat	346666	346709	88	+	.	.
scaffold1210	subtractBed	intrn	346675	346735	.	+	.	Parent=CGI_10014613;
	scaffold1210	TRF	Tandem_Repeat	346675	346735	59	+	.	.
scaffold1210	subtractBed	intrn	348039	348115	.	+	.	Parent=CGI_10014613;
	scaffold1210	TRF	Tandem_Repeat	348039	348115	106	+	.	.
scaffold1210	subtractBed	intrn	372753	372797	.	+	.	Parent=CGI_10014615;
	scaffold1210	TRF	Tandem_Repeat	372753	372797	81	+	.	.
scaffold1210	subtractBed	intrn	379406	380076	.	+	.	Parent=CGI_10014615;
	scaffold1210	TRF	Tandem_Repeat	379406	380076	983	+	.	.
scaffold1210	subtractBed	intrn	385838	385913	.	+	.	Parent=CGI_10014615;
	scaffold1210	TRF	Tandem_Repeat	385838	385913	116	+	.	.
scaffold1213	subtractBed	intrn	46485	46732	.	-	.	Parent=CGI_10027426;
	scaffold1213	TRF	Tandem_Repeat	46485	46732	319	+	.	.
scaffold1213	subtractBed	intrn	47915	47952	.	-	.	Parent=CGI_10027426;
	scaffold1213	TRF	Tandem_Repeat	47915	47952	76	+	.	.
scaffold1213	subtractBed	intrn	52284	52343	.	-	.	Parent=CGI_10027426;
	scaffold1213	TRF	Tandem_Repeat	52284	52343	57	+	.	.
scaffold1213	subtractBed	intrn	52040	52255	.	-	.	Parent=CGI_10027426;
	scaffold1213	WUBlastX	LINE_RTE-X	52040	52255	60	+	.	.
scaffold1213	subtractBed	intrn	51920	52234	.	-	.	Parent=CGI_10027426;
	scaffold1213	WUBlastX	LINE_RTE-X	51920	52234	31	+	.	.
scaffold1213	subtractBed	intrn	58311	58376	.	-	.	Parent=CGI_10027426;
	scaffold1213	TRF	Tandem_Repeat	58311	58376	123	+	.	.
scaffold1213	subtractBed	intrn	67497	67557	.	-	.	Parent=CGI_10027426;
	scaffold1213	TRF	Tandem_Repeat	67497	67557	122	+	.	.
scaffold1213	subtractBed	intrn	148862	149142	.	+	.	Parent=CGI_10027437;
	scaffold1213	TRF	Tandem_Repeat	148862	149142	284	+	.	.
scaffold1213	subtractBed	intrn	149439	149703	.	+	.	Parent=CGI_10027437;
	scaffold1213	TRF	Tandem_Repeat	149439	149703	253	+	.	.
scaffold1213	subtractBed	intrn	162243	163028	.	-	.	Parent=CGI_10027438;
	scaffold1213	TRF	Tandem_Repeat	162243	163028	804	+	.	.
scaffold1213	subtractBed	intrn	166322	167799	.	-	.	Parent=CGI_10027438;
	scaffold1213	TRF	Tandem_Repeat	166322	167799	1369	+	.	.
scaffold1213	subtractBed	intrn	177133	178281	.	-	.	Parent=CGI_10027439;
	scaffold1213	WUBlastX	LINE_RTE-X	177133	178281	308	-	.	.
scaffold1213	subtractBed	intrn	195758	195820	.	+	.	Parent=CGI_10027440;
	scaffold1213	TRF	Tandem_Repeat	195758	195820	126	+	.	.
scaffold1213	subtractBed	intrn	228816	228862	.	+	.	Parent=CGI_10027441;
	scaffold1213	TRF	Tandem_Repeat	228816	228862	94	+	.	.
scaffold1213	subtractBed	intrn	250226	250603	.	+	.	Parent=CGI_10027441;
	scaffold1213	WUBlastX	DNA_TcMar-Tc1	250226	250603	127	-	.	.
scaffold1213	subtractBed	intrn	251076	251294	.	+	.	Parent=CGI_10027441;
	scaffold1213	WUBlastX	DNA_TcMar-Tc1	251076	251294	94	-	.	.
scaffold1213	subtractBed	intrn	250932	251288	.	+	.	Parent=CGI_10027441;
	scaffold1213	WUBlastX	DNA_TcMar-Tc1	250932	251288	74	-	.	.
scaffold1213	subtractBed	intrn	250202	250678	.	+	.	Parent=CGI_10027441;
	scaffold1213	WUBlastX	DNA_TcMar-Tc1	250202	250678	117	-	.	.
scaffold1213	subtractBed	intrn	290595	290964	.	+	.	Parent=CGI_10027447;
	scaffold1213	TRF	Tandem_Repeat	290595	290964	573	+	.	.
scaffold1213	subtractBed	intrn	293920	294692	.	+	.	Parent=CGI_10027447;
	scaffold1213	TRF	Tandem_Repeat	293920	294692	766	+	.	.
scaffold1213	subtractBed	intrn	300613	300661	.	-	.	Parent=CGI_10027448;
	scaffold1213	TRF	Tandem_Repeat	300613	300661	62	+	.	.
scaffold1213	subtractBed	intrn	317081	317109	.	-	.	Parent=CGI_10027448;
	scaffold1213	TRF	Tandem_Repeat	317081	317109	58	+	.	.
scaffold1213	subtractBed	intrn	321512	321537	.	-	.	Parent=CGI_10027448;
	scaffold1213	TRF	Tandem_Repeat	321512	321537	52	+	.	.
scaffold1213	subtractBed	intrn	357168	357221	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	357168	357221	55	+	.	.
scaffold1213	subtractBed	intrn	358434	358847	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	358434	358847	52	+	.	.
scaffold1213	subtractBed	intrn	359264	359563	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	359264	359563	81	+	.	.
scaffold1213	subtractBed	intrn	359063	359497	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	359063	359497	68	+	.	.
scaffold1213	subtractBed	intrn	359234	359497	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	359234	359497	113	+	.	.
scaffold1213	subtractBed	intrn	359156	359491	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	359156	359491	111	+	.	.
scaffold1213	subtractBed	intrn	358789	358974	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_hAT-Tip100	358789	358974	30	+	.	.
scaffold1213	subtractBed	intrn	363257	363291	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	363257	363291	61	+	.	.
scaffold1213	subtractBed	intrn	386626	388137	.	+	.	Parent=CGI_10027449;
	scaffold1213	WUBlastX	DNA_TcMar-Pogo	386626	388137	792	+	.	.
scaffold1213	subtractBed	intrn	390158	390189	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	390158	390189	64	+	.	.
scaffold1213	subtractBed	intrn	396458	396483	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	396458	396483	52	+	.	.
scaffold1213	subtractBed	intrn	400246	401436	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	400246	401436	1346	+	.	.
scaffold1213	subtractBed	intrn	402802	403761	.	+	.	Parent=CGI_10027449;
	scaffold1213	TRF	Tandem_Repeat	402802	403761	1336	+	.	.
scaffold1213	subtractBed	intrn	409673	410256	.	-	.	Parent=CGI_10027450;
	scaffold1213	TRF	Tandem_Repeat	409673	410256	406	+	.	.
scaffold1213	subtractBed	intrn	409675	410233	.	-	.	Parent=CGI_10027450;
	scaffold1213	TRF	Tandem_Repeat	409675	410233	565	+	.	.
scaffold1213	subtractBed	intrn	409675	410233	.	-	.	Parent=CGI_10027450;
	scaffold1213	TRF	Tandem_Repeat	409675	410233	565	+	.	.
scaffold1213	subtractBed	intrn	412325	413227	.	-	.	Parent=CGI_10027450;
	scaffold1213	TRF	Tandem_Repeat	412325	413227	1108	+	.	.
scaffold1213	subtractBed	intrn	415568	416358	.	-	.	Parent=CGI_10027450;
	scaffold1213	TRF	Tandem_Repeat	415568	416358	938	+	.	.
scaffold1213	subtractBed	intrn	420024	420203	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	420024	420203	117	+	.	.
scaffold1213	subtractBed	intrn	420221	420949	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	420221	420949	207	+	.	.
scaffold1213	subtractBed	intrn	414700	415176	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1	414700	415176	92	-	.	.
scaffold1213	subtractBed	intrn	419988	420200	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	419988	420200	92	+	.	.
scaffold1213	subtractBed	intrn	416599	417627	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	416599	417627	343	-	.	.
scaffold1213	subtractBed	intrn	417654	418061	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	417654	418061	101	-	.	.
scaffold1213	subtractBed	intrn	414832	415284	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	414832	415284	170	-	.	.
scaffold1213	subtractBed	intrn	414781	415176	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	414781	415176	209	-	.	.
scaffold1213	subtractBed	intrn	419237	419452	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	419237	419452	83	-	.	.
scaffold1213	subtractBed	intrn	419303	419503	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1	419303	419503	76	-	.	.
scaffold1213	subtractBed	intrn	420939	421763	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	420939	421763	37	+	.	.
scaffold1213	subtractBed	intrn	420212	420832	.	-	.	Parent=CGI_10027450;
	scaffold1213	WUBlastX	LINE_L1-Tx1	420212	420832	211	+	.	.
scaffold1213	subtractBed	intrn	510923	510951	.	-	.	Parent=CGI_10027452;
	scaffold1213	TRF	Tandem_Repeat	510923	510951	58	+	.	.
scaffold1213	subtractBed	intrn	512170	512205	.	-	.	Parent=CGI_10027452;
	scaffold1213	TRF	Tandem_Repeat	512170	512205	54	+	.	.
scaffold1213	subtractBed	intrn	545652	546341	.	-	.	Parent=CGI_10027453;
	scaffold1213	WUBlastX	LTR_Gypsy	545652	546341	104	-	.	.
scaffold1213	subtractBed	intrn	554099	554386	.	-	.	Parent=CGI_10027454;
	scaffold1213	TRF	Tandem_Repeat	554099	554386	576	+	.	.
scaffold1213	subtractBed	intrn	568022	568064	.	-	.	Parent=CGI_10027454;
	scaffold1213	TRF	Tandem_Repeat	568022	568064	86	+	.	.
scaffold1213	subtractBed	intrn	641924	641977	.	-	.	Parent=CGI_10027457;
	scaffold1213	TRF	Tandem_Repeat	641924	641977	58	+	.	.
scaffold1213	subtractBed	intrn	669208	669283	.	-	.	Parent=CGI_10027461;
	scaffold1213	WUBlastX	DNA_Transib	669104	669283	58	-	.	.
scaffold1213	subtractBed	intrn	681261	681317	.	+	.	Parent=CGI_10027462;
	scaffold1213	TRF	Tandem_Repeat	681261	681317	114	+	.	.
scaffold1213	subtractBed	intrn	697184	697236	.	+	.	Parent=CGI_10027463;
	scaffold1213	TRF	Tandem_Repeat	697184	697236	99	+	.	.
scaffold1213	subtractBed	intrn	712847	712894	.	-	.	Parent=CGI_10027464;
	scaffold1213	TRF	Tandem_Repeat	712847	712894	60	+	.	.
scaffold1213	subtractBed	intrn	723337	723654	.	-	.	Parent=CGI_10027464;
	scaffold1213	TRF	Tandem_Repeat	723337	723654	297	+	.	.
scaffold1213	subtractBed	intrn	757339	757375	.	+	.	Parent=CGI_10027466;
	scaffold1213	TRF	Tandem_Repeat	757339	757375	58	+	.	.
scaffold1213	subtractBed	intrn	779329	779388	.	+	.	Parent=CGI_10027467;
	scaffold1213	TRF	Tandem_Repeat	779329	779388	120	+	.	.
scaffold1213	subtractBed	intrn	796594	796669	.	+	.	Parent=CGI_10027469;
	scaffold1213	TRF	Tandem_Repeat	796594	796669	111	+	.	.
scaffold1213	subtractBed	intrn	805744	805808	.	+	.	Parent=CGI_10027470;
	scaffold1213	TRF	Tandem_Repeat	805744	805808	96	+	.	.
scaffold1213	subtractBed	intrn	958332	958452	.	-	.	Parent=CGI_10027477;
	scaffold1213	TRF	Tandem_Repeat	958332	958452	224	+	.	.
scaffold1213	subtractBed	intrn	958558	958696	.	-	.	Parent=CGI_10027477;
	scaffold1213	TRF	Tandem_Repeat	958558	958696	113	+	.	.
scaffold1213	subtractBed	intrn	983523	983585	.	+	.	Parent=CGI_10027478;
	scaffold1213	TRF	Tandem_Repeat	983523	983585	126	+	.	.
scaffold1213	subtractBed	intrn	1091570	1091656	.	+	.	Parent=CGI_10027484;
	scaffold1213	TRF	Tandem_Repeat	1091570	1091656	142	+	.	.
scaffold1213	subtractBed	intrn	1091971	1092020	.	+	.	Parent=CGI_10027484;
	scaffold1213	TRF	Tandem_Repeat	1091971	1092020	100	+	.	.
scaffold1213	subtractBed	intrn	1118465	1118548	.	-	.	Parent=CGI_10027485;
	scaffold1213	TRF	Tandem_Repeat	1118465	1118548	77	+	.	.
scaffold1213	subtractBed	intrn	1118481	1118545	.	-	.	Parent=CGI_10027485;
	scaffold1213	TRF	Tandem_Repeat	1118481	1118545	96	+	.	.
scaffold1213	subtractBed	intrn	1118465	1118548	.	-	.	Parent=CGI_10027485;
	scaffold1213	TRF	Tandem_Repeat	1118465	1118548	100	+	.	.
scaffold1213	subtractBed	intrn	1120562	1120611	.	-	.	Parent=CGI_10027485;
	scaffold1213	TRF	Tandem_Repeat	1120562	1120611	91	+	.	.
scaffold1213	subtractBed	intrn	1130053	1130132	.	-	.	Parent=CGI_10027485;
	scaffold1213	TRF	Tandem_Repeat	1130053	1130132	63	+	.	.
scaffold1213	subtractBed	intrn	1134995	1135642	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1134995	1135642	115	-	.	.
scaffold1213	subtractBed	intrn	1132330	1133034	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1132330	1133034	223	-	.	.
scaffold1213	subtractBed	intrn	1133426	1133851	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1133426	1133851	204	-	.	.
scaffold1213	subtractBed	intrn	1133881	1134120	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1133881	1134120	140	-	.	.
scaffold1213	subtractBed	intrn	1134060	1134962	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1134060	1134962	496	-	.	.
scaffold1213	subtractBed	intrn	1135001	1135837	.	-	.	Parent=CGI_10027485;
	scaffold1213	WUBlastX	LTR_Ngaro	1135001	1135837	111	-	.	.
scaffold1213	subtractBed	intrn	1212643	1212700	.	+	.	Parent=CGI_10027487;
	scaffold1213	TRF	Tandem_Repeat	1212643	1212700	116	+	.	.
scaffold1213	subtractBed	intrn	1213646	1214063	.	+	.	Parent=CGI_10027487;
	scaffold1213	TRF	Tandem_Repeat	1213646	1214063	611	+	.	.
scaffold1213	subtractBed	intrn	1279677	1279713	.	-	.	Parent=CGI_10027493;
	scaffold1213	TRF	Tandem_Repeat	1279677	1279713	74	+	.	.
scaffold1214	subtractBed	intrn	2692	2736	.	+	.	Parent=CGI_10015471;
	scaffold1214	TRF	Tandem_Repeat	2692	2736	90	+	.	.
scaffold1214	subtractBed	intrn	14094	14121	.	-	.	Parent=CGI_10015472;
	scaffold1214	TRF	Tandem_Repeat	14094	14121	56	+	.	.
scaffold1214	subtractBed	intrn	16720	16775	.	-	.	Parent=CGI_10015472;
	scaffold1214	TRF	Tandem_Repeat	16720	16775	112	+	.	.
scaffold1214	subtractBed	intrn	19137	19171	.	-	.	Parent=CGI_10015472;
	scaffold1214	TRF	Tandem_Repeat	19137	19171	70	+	.	.
scaffold1214	subtractBed	intrn	27460	27506	.	-	.	Parent=CGI_10015472;
	scaffold1214	TRF	Tandem_Repeat	27460	27506	94	+	.	.
scaffold1214	subtractBed	intrn	32794	32837	.	-	.	Parent=CGI_10015472;
	scaffold1214	TRF	Tandem_Repeat	32794	32837	88	+	.	.
scaffold1214	subtractBed	intrn	43450	43979	.	-	.	Parent=CGI_10015473;
	scaffold1214	TRF	Tandem_Repeat	43450	43979	873	+	.	.
scaffold1214	subtractBed	intrn	47947	48436	.	-	.	Parent=CGI_10015473;
	scaffold1214	TRF	Tandem_Repeat	47947	48436	753	+	.	.
scaffold1214	subtractBed	intrn	56777	56832	.	-	.	Parent=CGI_10015473;
	scaffold1214	TRF	Tandem_Repeat	56777	56832	112	+	.	.
scaffold1214	subtractBed	intrn	62443	62482	.	-	.	Parent=CGI_10015473;
	scaffold1214	TRF	Tandem_Repeat	62443	62482	73	+	.	.
scaffold1214	subtractBed	intrn	100423	100468	.	-	.	Parent=CGI_10015474;
	scaffold1214	TRF	Tandem_Repeat	100423	100468	83	+	.	.
scaffold1214	subtractBed	intrn	131985	132731	.	+	.	Parent=CGI_10015477;
	scaffold1214	TRF	Tandem_Repeat	131985	132731	963	+	.	.
scaffold1214	subtractBed	intrn	134421	135365	.	+	.	Parent=CGI_10015477;
	scaffold1214	WUBlastX	DNA_TcMar-m44	134421	135365	588	-	.	.
scaffold1214	subtractBed	intrn	244986	245023	.	+	.	Parent=CGI_10015480;
	scaffold1214	TRF	Tandem_Repeat	244986	245023	58	+	.	.
scaffold1214	subtractBed	intrn	243224	243550	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_L2	243224	243550	28	+	.	.
scaffold1214	subtractBed	intrn	244235	244675	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_RTE-X	244235	244675	54	+	.	.
scaffold1214	subtractBed	intrn	243642	243695	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_I	243642	243695	23	+	.	.
scaffold1214	subtractBed	intrn	243849	244232	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_RTE-X	243849	244232	56	+	.	.
scaffold1214	subtractBed	intrn	244695	244766	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_RTE-X	244695	244766	33	+	.	.
scaffold1214	subtractBed	intrn	243275	243658	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_RTE-X	243275	243658	116	+	.	.
scaffold1214	subtractBed	intrn	244713	244787	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_RTE-X	244713	244787	27	+	.	.
scaffold1214	subtractBed	intrn	247854	247945	.	+	.	Parent=CGI_10015480;
	scaffold1214	TRF	Tandem_Repeat	247854	247945	87	+	.	.
scaffold1214	subtractBed	intrn	251921	252478	.	+	.	Parent=CGI_10015480;
	scaffold1214	TRF	Tandem_Repeat	251921	252478	697	+	.	.
scaffold1214	subtractBed	intrn	250444	250734	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	250444	250734	206	-	.	.
scaffold1214	subtractBed	intrn	251217	251711	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	251217	251711	26	-	.	.
scaffold1214	subtractBed	intrn	249910	250071	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	249910	250071	40	-	.	.
scaffold1214	subtractBed	intrn	251394	251768	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	251394	251768	134	-	.	.
scaffold1214	subtractBed	intrn	250023	250439	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	250023	250439	235	-	.	.
scaffold1214	subtractBed	intrn	250760	251122	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LTR_Ngaro	250760	251122	162	-	.	.
scaffold1214	subtractBed	intrn	247105	247500	.	+	.	Parent=CGI_10015480;
	scaffold1214	WUBlastX	LINE_CR1	247105	247500	60	-	.	.
scaffold1214	subtractBed	intrn	274918	275120	.	-	.	Parent=CGI_10015482;
	scaffold1214	TRF	Tandem_Repeat	274918	275120	140	+	.	.
scaffold1214	subtractBed	intrn	274974	275144	.	-	.	Parent=CGI_10015482;
	scaffold1214	TRF	Tandem_Repeat	274974	275144	150	+	.	.
scaffold1214	subtractBed	intrn	275121	275267	.	-	.	Parent=CGI_10015482;
	scaffold1214	TRF	Tandem_Repeat	275121	275267	123	+	.	.
scaffold1214	subtractBed	intrn	293756	293813	.	-	.	Parent=CGI_10015483;
	scaffold1214	TRF	Tandem_Repeat	293756	293813	73	+	.	.
scaffold1214	subtractBed	intrn	293756	293807	.	-	.	Parent=CGI_10015483;
	scaffold1214	TRF	Tandem_Repeat	293756	293807	86	+	.	.
scaffold1214	subtractBed	intrn	305549	305588	.	-	.	Parent=CGI_10015483;
	scaffold1214	TRF	Tandem_Repeat	305549	305588	80	+	.	.
scaffold1214	subtractBed	intrn	371117	371168	.	-	.	Parent=CGI_10015488;
	scaffold1214	TRF	Tandem_Repeat	371117	371168	104	+	.	.
scaffold1214	subtractBed	intrn	401184	401213	.	+	.	Parent=CGI_10015490;
	scaffold1214	TRF	Tandem_Repeat	401184	401213	51	+	.	.
scaffold1217	subtractBed	intrn	93483	93843	.	-	.	Parent=CGI_10009994;
	scaffold1217	TRF	Tandem_Repeat	93483	93843	502	+	.	.
scaffold1217	subtractBed	intrn	133246	133965	.	+	.	Parent=CGI_10009995;
	scaffold1217	WUBlastX	LTR_Gypsy	133246	133965	176	+	.	.
scaffold1217	subtractBed	intrn	167759	167801	.	+	.	Parent=CGI_10009997;
	scaffold1217	TRF	Tandem_Repeat	167759	167801	86	+	.	.
scaffold1217	subtractBed	intrn	181274	181316	.	-	.	Parent=CGI_10009998;
	scaffold1217	TRF	Tandem_Repeat	181274	181316	86	+	.	.
scaffold1217	subtractBed	intrn	194372	194410	.	+	.	Parent=CGI_10009999;
	scaffold1217	TRF	Tandem_Repeat	194372	194410	51	+	.	.
scaffold1217	subtractBed	intrn	196609	196664	.	+	.	Parent=CGI_10009999;
	scaffold1217	TRF	Tandem_Repeat	196609	196664	112	+	.	.
scaffold1217	subtractBed	intrn	194372	194410	.	-	.	Parent=CGI_10010000;
	scaffold1217	TRF	Tandem_Repeat	194372	194410	51	+	.	.
scaffold1217	subtractBed	intrn	196609	196664	.	-	.	Parent=CGI_10010000;
	scaffold1217	TRF	Tandem_Repeat	196609	196664	112	+	.	.
scaffold1217	subtractBed	intrn	201405	201441	.	-	.	Parent=CGI_10010000;
	scaffold1217	TRF	Tandem_Repeat	201405	201441	74	+	.	.
scaffold1217	subtractBed	intrn	201911	201939	.	-	.	Parent=CGI_10010000;
	scaffold1217	TRF	Tandem_Repeat	201911	201939	58	+	.	.
scaffold1219	subtractBed	intrn	4966	5589	.	+	.	Parent=CGI_10024240;
	scaffold1219	TRF	Tandem_Repeat	4966	5589	764	+	.	.
scaffold1219	subtractBed	intrn	20329	20577	.	+	.	Parent=CGI_10024241;
	scaffold1219	TRF	Tandem_Repeat	20329	20577	417	+	.	.
scaffold1219	subtractBed	intrn	29160	29283	.	+	.	Parent=CGI_10024242;
	scaffold1219	TRF	Tandem_Repeat	29160	29283	57	+	.	.
scaffold1219	subtractBed	intrn	29174	29315	.	+	.	Parent=CGI_10024242;
	scaffold1219	TRF	Tandem_Repeat	29174	29315	142	+	.	.
scaffold1219	subtractBed	intrn	60036	60080	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	60036	60080	90	+	.	.
scaffold1219	subtractBed	intrn	61147	61188	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	61147	61188	84	+	.	.
scaffold1219	subtractBed	intrn	68030	68376	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	68030	68376	480	+	.	.
scaffold1219	subtractBed	intrn	70953	71745	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	70953	71745	950	+	.	.
scaffold1219	subtractBed	intrn	74181	74214	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	74181	74214	59	+	.	.
scaffold1219	subtractBed	intrn	76224	76435	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	76224	76435	110	+	.	.
scaffold1219	subtractBed	intrn	80496	80983	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	80496	80983	615	+	.	.
scaffold1219	subtractBed	intrn	81110	81218	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	81110	81218	71	+	.	.
scaffold1219	subtractBed	intrn	81110	81200	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	81110	81200	85	+	.	.
scaffold1219	subtractBed	intrn	81111	81205	.	+	.	Parent=CGI_10024245;
	scaffold1219	TRF	Tandem_Repeat	81111	81205	111	+	.	.
scaffold1219	subtractBed	intrn	139431	139655	.	+	.	Parent=CGI_10024248;
	scaffold1219	TRF	Tandem_Repeat	139431	139655	243	+	.	.
scaffold1219	subtractBed	intrn	139429	139639	.	+	.	Parent=CGI_10024248;
	scaffold1219	TRF	Tandem_Repeat	139429	139639	298	+	.	.
scaffold1219	subtractBed	intrn	144096	144223	.	+	.	Parent=CGI_10024248;
	scaffold1219	TRF	Tandem_Repeat	144096	144223	88	+	.	.
scaffold1219	subtractBed	intrn	178543	178982	.	-	.	Parent=CGI_10024253;
	scaffold1219	TRF	Tandem_Repeat	178543	178982	601	+	.	.
scaffold1219	subtractBed	intrn	178518	178984	.	-	.	Parent=CGI_10024253;
	scaffold1219	TRF	Tandem_Repeat	178518	178984	642	+	.	.
scaffold1219	subtractBed	intrn	179919	180135	.	-	.	Parent=CGI_10024253;
	scaffold1219	TRF	Tandem_Repeat	179919	180135	312	+	.	.
scaffold1219	subtractBed	intrn	197219	197533	.	-	.	Parent=CGI_10024255;
	scaffold1219	TRF	Tandem_Repeat	197219	197533	560	+	.	.
scaffold1219	subtractBed	intrn	208063	208211	.	-	.	Parent=CGI_10024257;
	scaffold1219	TRF	Tandem_Repeat	208063	208211	90	+	.	.
scaffold1219	subtractBed	intrn	209625	209656	.	-	.	Parent=CGI_10024257;
	scaffold1219	TRF	Tandem_Repeat	209625	209656	55	+	.	.
scaffold1219	subtractBed	intrn	217867	218218	.	-	.	Parent=CGI_10024258;
	scaffold1219	TRF	Tandem_Repeat	217867	218218	542	+	.	.
scaffold1219	subtractBed	intrn	221283	221650	.	-	.	Parent=CGI_10024258;
	scaffold1219	TRF	Tandem_Repeat	221283	221689	742	+	.	.
scaffold1219	subtractBed	intrn	331969	332320	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	331969	332320	550	+	.	.
scaffold1219	subtractBed	intrn	332883	333106	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	332883	333106	193	+	.	.
scaffold1219	subtractBed	intrn	332691	334114	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	332691	334114	461	+	.	.
scaffold1219	subtractBed	intrn	333307	333396	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	333307	333396	63	+	.	.
scaffold1219	subtractBed	intrn	333762	333898	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	333762	333898	116	+	.	.
scaffold1219	subtractBed	intrn	332428	333918	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	332428	333918	161	+	.	.
scaffold1219	subtractBed	intrn	334002	334127	.	-	.	Parent=CGI_10024264;
	scaffold1219	TRF	Tandem_Repeat	334002	334127	148	+	.	.
scaffold1219	subtractBed	intrn	331969	332320	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	331969	332320	550	+	.	.
scaffold1219	subtractBed	intrn	332883	333106	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	332883	333106	193	+	.	.
scaffold1219	subtractBed	intrn	332691	334114	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	332691	334114	461	+	.	.
scaffold1219	subtractBed	intrn	333307	333396	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	333307	333396	63	+	.	.
scaffold1219	subtractBed	intrn	333762	333898	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	333762	333898	116	+	.	.
scaffold1219	subtractBed	intrn	332428	333918	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	332428	333918	161	+	.	.
scaffold1219	subtractBed	intrn	334002	334127	.	+	.	Parent=CGI_10024265;
	scaffold1219	TRF	Tandem_Repeat	334002	334127	148	+	.	.
scaffold1219	subtractBed	intrn	368926	369129	.	+	.	Parent=CGI_10024267;
	scaffold1219	TRF	Tandem_Repeat	368914	369129	405	+	.	.
scaffold1219	subtractBed	intrn	370204	370992	.	+	.	Parent=CGI_10024267;
	scaffold1219	TRF	Tandem_Repeat	370195	370992	1272	+	.	.
scaffold1219	subtractBed	intrn	371988	372024	.	+	.	Parent=CGI_10024267;
	scaffold1219	TRF	Tandem_Repeat	371988	372024	65	+	.	.
scaffold1219	subtractBed	intrn	373405	373452	.	+	.	Parent=CGI_10024267;
	scaffold1219	TRF	Tandem_Repeat	373405	373452	69	+	.	.
scaffold1219	subtractBed	intrn	438778	438816	.	+	.	Parent=CGI_10024274;
	scaffold1219	TRF	Tandem_Repeat	438778	438816	78	+	.	.
scaffold1219	subtractBed	intrn	462143	469012	.	-	.	Parent=CGI_10024277;
	scaffold1219	TRF	Tandem_Repeat	462143	469012	6281	+	.	.
scaffold1219	subtractBed	intrn	477292	477477	.	+	.	Parent=CGI_10024278;
	scaffold1219	TRF	Tandem_Repeat	477292	477477	192	+	.	.
scaffold1219	subtractBed	intrn	477373	477512	.	+	.	Parent=CGI_10024278;
	scaffold1219	TRF	Tandem_Repeat	477373	477512	95	+	.	.
scaffold1219	subtractBed	intrn	511161	511400	.	+	.	Parent=CGI_10024280;
	scaffold1219	TRF	Tandem_Repeat	511161	511400	128	+	.	.
scaffold1219	subtractBed	intrn	527691	528709	.	-	.	Parent=CGI_10024281;
	scaffold1219	TRF	Tandem_Repeat	527691	528709	1203	+	.	.
scaffold1219	subtractBed	intrn	528882	528949	.	-	.	Parent=CGI_10024281;
	scaffold1219	TRF	Tandem_Repeat	528882	528949	64	+	.	.
scaffold1219	subtractBed	intrn	528879	528957	.	-	.	Parent=CGI_10024281;
	scaffold1219	TRF	Tandem_Repeat	528879	528957	104	+	.	.
scaffold1219	subtractBed	intrn	534227	534296	.	-	.	Parent=CGI_10024282;
	scaffold1219	TRF	Tandem_Repeat	534227	534296	140	+	.	.
scaffold1219	subtractBed	intrn	538347	539787	.	-	.	Parent=CGI_10024283;
	scaffold1219	TRF	Tandem_Repeat	538347	539787	1888	+	.	.
scaffold1219	subtractBed	intrn	575631	575672	.	-	.	Parent=CGI_10024286;
	scaffold1219	TRF	Tandem_Repeat	575631	575672	59	+	.	.
scaffold1219	subtractBed	intrn	581505	581927	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LINE_RTE-X	581505	581927	122	-	.	.
scaffold1219	subtractBed	intrn	581388	581936	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LINE_RTE-X	581388	581936	69	-	.	.
scaffold1219	subtractBed	intrn	599795	599831	.	-	.	Parent=CGI_10024286;
	scaffold1219	TRF	Tandem_Repeat	599795	599831	74	+	.	.
scaffold1219	subtractBed	intrn	602622	602665	.	-	.	Parent=CGI_10024286;
	scaffold1219	TRF	Tandem_Repeat	602622	602665	52	+	.	.
scaffold1219	subtractBed	intrn	607833	607939	.	-	.	Parent=CGI_10024286;
	scaffold1219	TRF	Tandem_Repeat	607833	607939	168	+	.	.
scaffold1219	subtractBed	intrn	609019	609193	.	-	.	Parent=CGI_10024286;
	scaffold1219	TRF	Tandem_Repeat	609019	609193	323	+	.	.
scaffold1219	subtractBed	intrn	618177	618968	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LTR_Gypsy	618177	618968	66	-	.	.
scaffold1219	subtractBed	intrn	615345	616181	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LTR_DIRS	615345	616181	609	-	.	.
scaffold1219	subtractBed	intrn	616154	617539	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LTR_DIRS	616154	617539	1207	-	.	.
scaffold1219	subtractBed	intrn	618342	618959	.	-	.	Parent=CGI_10024286;
	scaffold1219	WUBlastX	LTR_DIRS	618342	618959	513	-	.	.
scaffold1219	subtractBed	intrn	575631	575672	.	+	.	Parent=CGI_10024287;
	scaffold1219	TRF	Tandem_Repeat	575631	575672	59	+	.	.
scaffold1219	subtractBed	intrn	679748	679805	.	-	.	Parent=CGI_10024289;
	scaffold1219	TRF	Tandem_Repeat	679748	679805	100	+	.	.
scaffold1219	subtractBed	intrn	679748	679793	.	-	.	Parent=CGI_10024289;
	scaffold1219	TRF	Tandem_Repeat	679748	679793	56	+	.	.
scaffold1219	subtractBed	intrn	731076	731133	.	+	.	Parent=CGI_10024296;
	scaffold1219	TRF	Tandem_Repeat	731076	731133	109	+	.	.
scaffold1219	subtractBed	intrn	734779	734831	.	+	.	Parent=CGI_10024296;
	scaffold1219	TRF	Tandem_Repeat	734779	734831	97	+	.	.
scaffold1219	subtractBed	intrn	736395	736510	.	+	.	Parent=CGI_10024296;
	scaffold1219	TRF	Tandem_Repeat	736395	736510	173	+	.	.
scaffold1219	subtractBed	intrn	848380	848423	.	-	.	Parent=CGI_10024300;
	scaffold1219	TRF	Tandem_Repeat	848380	848423	88	+	.	.
scaffold1219	subtractBed	intrn	848380	848423	.	+	.	Parent=CGI_10024301;
	scaffold1219	TRF	Tandem_Repeat	848380	848423	88	+	.	.
scaffold1219	subtractBed	intrn	870448	870834	.	+	.	Parent=CGI_10024304;
	scaffold1219	WUBlastX	LINE_L1-Tx1	870448	870834	82	-	.	.
scaffold1219	subtractBed	intrn	870343	870828	.	+	.	Parent=CGI_10024304;
	scaffold1219	WUBlastX	LINE_L1-Tx1	870343	870828	30	-	.	.
scaffold1219	subtractBed	intrn	870451	871062	.	+	.	Parent=CGI_10024304;
	scaffold1219	WUBlastX	LINE_L1-Tx1	870451	871062	46	-	.	.
scaffold1219	subtractBed	intrn	870640	870870	.	+	.	Parent=CGI_10024304;
	scaffold1219	WUBlastX	LINE_Dong-R4	870640	870870	51	-	.	.
scaffold1219	subtractBed	intrn	878178	878223	.	-	.	Parent=CGI_10024306;
	scaffold1219	TRF	Tandem_Repeat	878178	878223	92	+	.	.
scaffold1219	subtractBed	intrn	893192	893245	.	-	.	Parent=CGI_10024307;
	scaffold1219	TRF	Tandem_Repeat	893192	893245	63	+	.	.
scaffold1219	subtractBed	intrn	893192	893239	.	-	.	Parent=CGI_10024307;
	scaffold1219	TRF	Tandem_Repeat	893192	893239	69	+	.	.
scaffold1219	subtractBed	intrn	896885	897184	.	-	.	Parent=CGI_10024307;
	scaffold1219	WUBlastX	DNA_hAT-Blackja	896885	897184	80	-	.	.
scaffold122	subtractBed	intrn	23622	23832	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	23622	23832	217	+	.	.
scaffold122	subtractBed	intrn	28060	28368	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	28060	28368	222	+	.	.
scaffold122	subtractBed	intrn	28081	28556	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	28081	28556	273	+	.	.
scaffold122	subtractBed	intrn	28085	28522	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	28085	28522	108	+	.	.
scaffold122	subtractBed	intrn	28257	28392	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	28257	28392	82	+	.	.
scaffold122	subtractBed	intrn	28090	28533	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	28090	28533	191	+	.	.
scaffold122	subtractBed	intrn	43135	43394	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	43135	43394	167	+	.	.
scaffold122	subtractBed	intrn	43160	43269	.	+	.	Parent=CGI_10011865;
	scaffold122	TRF	Tandem_Repeat	43160	43269	68	+	.	.
scaffold122	subtractBed	intrn	122955	122996	.	+	.	Parent=CGI_10011869;
	scaffold122	TRF	Tandem_Repeat	122955	122996	84	+	.	.
scaffold122	subtractBed	intrn	135236	135288	.	+	.	Parent=CGI_10011870;
	scaffold122	TRF	Tandem_Repeat	135236	135288	106	+	.	.
scaffold122	subtractBed	intrn	202354	202594	.	-	.	Parent=CGI_10011875;
	scaffold122	TRF	Tandem_Repeat	202354	202599	375	+	.	.
scaffold122	subtractBed	intrn	203937	203983	.	-	.	Parent=CGI_10011875;
	scaffold122	TRF	Tandem_Repeat	203937	203983	94	+	.	.
scaffold122	subtractBed	intrn	219370	221056	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	219370	221056	1824	+	.	.
scaffold122	subtractBed	intrn	219374	221056	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	219374	221056	1834	+	.	.
scaffold122	subtractBed	intrn	220137	221335	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	220137	221335	1453	+	.	.
scaffold122	subtractBed	intrn	221054	221340	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	221054	221340	265	+	.	.
scaffold122	subtractBed	intrn	222576	223838	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	222576	223838	1035	+	.	.
scaffold122	subtractBed	intrn	225737	227572	.	-	.	Parent=CGI_10011877;
	scaffold122	TRF	Tandem_Repeat	225737	227572	2533	+	.	.
scaffold122	subtractBed	intrn	246994	247028	.	-	.	Parent=CGI_10011879;
	scaffold122	TRF	Tandem_Repeat	246994	247028	70	+	.	.
scaffold122	subtractBed	intrn	255343	255343	.	-	.	Parent=CGI_10011880;
	scaffold122	WUBlastX	DNA_Kolobok	255083	255343	94	-	.	.
scaffold122	subtractBed	intrn	255466	255467	.	-	.	Parent=CGI_10011880;
	scaffold122	WUBlastX	DNA_Kolobok	255466	255651	114	-	.	.
scaffold1220	subtractBed	intrn	17455	17506	.	-	.	Parent=CGI_10006798;
	scaffold1220	TRF	Tandem_Repeat	17455	17506	97	+	.	.
scaffold1220	subtractBed	intrn	17701	17733	.	-	.	Parent=CGI_10006798;
	scaffold1220	TRF	Tandem_Repeat	17701	17733	66	+	.	.
scaffold1220	subtractBed	intrn	19693	19760	.	-	.	Parent=CGI_10006798;
	scaffold1220	TRF	Tandem_Repeat	19693	19760	127	+	.	.
scaffold1220	subtractBed	intrn	19693	19760	.	+	.	Parent=CGI_10006799;
	scaffold1220	TRF	Tandem_Repeat	19693	19760	127	+	.	.
scaffold1220	subtractBed	intrn	20411	20448	.	+	.	Parent=CGI_10006799;
	scaffold1220	TRF	Tandem_Repeat	20411	20448	76	+	.	.
scaffold1220	subtractBed	intrn	32753	32790	.	-	.	Parent=CGI_10006800;
	scaffold1220	TRF	Tandem_Repeat	32753	32790	76	+	.	.
scaffold1220	subtractBed	intrn	68880	68915	.	-	.	Parent=CGI_10006801;
	scaffold1220	TRF	Tandem_Repeat	68880	68915	72	+	.	.
scaffold1220	subtractBed	intrn	92299	92326	.	-	.	Parent=CGI_10006803;
	scaffold1220	TRF	Tandem_Repeat	92299	92326	56	+	.	.
scaffold1220	subtractBed	intrn	92433	92481	.	-	.	Parent=CGI_10006803;
	scaffold1220	TRF	Tandem_Repeat	92433	92481	98	+	.	.
scaffold1220	subtractBed	intrn	92551	92614	.	-	.	Parent=CGI_10006803;
	scaffold1220	TRF	Tandem_Repeat	92551	92614	103	+	.	.
scaffold1220	subtractBed	intrn	98355	98802	.	+	.	Parent=CGI_10006804;
	scaffold1220	TRF	Tandem_Repeat	98355	98827	795	+	.	.
scaffold1220	subtractBed	intrn	100708	100805	.	+	.	Parent=CGI_10006804;
	scaffold1220	TRF	Tandem_Repeat	100708	100805	171	+	.	.
scaffold1220	subtractBed	intrn	101488	101573	.	+	.	Parent=CGI_10006804;
	scaffold1220	TRF	Tandem_Repeat	101488	101573	108	+	.	.
scaffold1220	subtractBed	intrn	155678	155707	.	-	.	Parent=CGI_10006808;
	scaffold1220	TRF	Tandem_Repeat	155678	155707	51	+	.	.
scaffold1221	subtractBed	intrn	7928	8164	.	-	.	Parent=CGI_10019721;
	scaffold1221	WUBlastX	LTR_Gypsy	7928	8317	28	-	.	.
scaffold1221	subtractBed	intrn	8048	8164	.	-	.	Parent=CGI_10019721;
	scaffold1221	WUBlastX	LTR_Gypsy	8048	8317	42	-	.	.
scaffold1221	subtractBed	intrn	14010	14058	.	+	.	Parent=CGI_10019722;
	scaffold1221	TRF	Tandem_Repeat	14010	14058	73	+	.	.
scaffold1221	subtractBed	intrn	17530	17569	.	+	.	Parent=CGI_10019722;
	scaffold1221	TRF	Tandem_Repeat	17530	17569	80	+	.	.
scaffold1221	subtractBed	intrn	20290	20764	.	+	.	Parent=CGI_10019722;
	scaffold1221	TRF	Tandem_Repeat	20290	20764	604	+	.	.
scaffold1221	subtractBed	intrn	20290	20764	.	+	.	Parent=CGI_10019722;
	scaffold1221	TRF	Tandem_Repeat	20290	20764	604	+	.	.
scaffold1221	subtractBed	intrn	20290	20764	.	+	.	Parent=CGI_10019722;
	scaffold1221	TRF	Tandem_Repeat	20290	20764	598	+	.	.
scaffold1221	subtractBed	intrn	63630	63669	.	+	.	Parent=CGI_10019728;
	scaffold1221	TRF	Tandem_Repeat	63630	63669	80	+	.	.
scaffold1221	subtractBed	intrn	64552	64620	.	+	.	Parent=CGI_10019728;
	scaffold1221	TRF	Tandem_Repeat	64552	64620	63	+	.	.
scaffold1221	subtractBed	intrn	66662	67015	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	DNA_Maverick	66662	67015	43	-	.	.
scaffold1221	subtractBed	intrn	67015	67824	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	67015	67824	549	-	.	.
scaffold1221	subtractBed	intrn	68253	68477	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	68253	68477	221	-	.	.
scaffold1221	subtractBed	intrn	69329	69430	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	69329	69430	25	-	.	.
scaffold1221	subtractBed	intrn	66770	67009	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy-Cigr	66770	67009	93	-	.	.
scaffold1221	subtractBed	intrn	66955	67323	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	66955	67323	119	-	.	.
scaffold1221	subtractBed	intrn	67901	68245	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	67901	68245	260	-	.	.
scaffold1221	subtractBed	intrn	69153	69362	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	69153	69362	48	-	.	.
scaffold1221	subtractBed	intrn	67805	68260	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy-Cigr	67805	68260	252	-	.	.
scaffold1221	subtractBed	intrn	68256	68564	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy	68256	68564	206	-	.	.
scaffold1221	subtractBed	intrn	68253	69320	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	LTR_Gypsy-Cigr	68253	69320	194	-	.	.
scaffold1221	subtractBed	intrn	64671	66413	.	+	.	Parent=CGI_10019728;
	scaffold1221	WUBlastX	RC_Helitron	64671	66413	656	+	.	.
scaffold1221	subtractBed	intrn	87952	88761	.	-	.	Parent=CGI_10019730;
	scaffold1221	WUBlastX	DNA_MuDR	87952	88761	242	+	.	.
scaffold1221	subtractBed	intrn	86125	86205	.	-	.	Parent=CGI_10019730;
	scaffold1221	WUBlastX	LTR_Gypsy	86125	86205	84	+	.	.
scaffold1221	subtractBed	intrn	90624	90664	.	-	.	Parent=CGI_10019730;
	scaffold1221	TRF	Tandem_Repeat	90624	90664	82	+	.	.
scaffold1221	subtractBed	intrn	93517	93927	.	-	.	Parent=CGI_10019730;
	scaffold1221	WUBlastX	LINE_RTE-X	93517	93927	94	+	.	.
scaffold1221	subtractBed	intrn	99989	100046	.	+	.	Parent=CGI_10019731;
	scaffold1221	TRF	Tandem_Repeat	99989	100046	116	+	.	.
scaffold1221	subtractBed	intrn	133047	133077	.	-	.	Parent=CGI_10019734;
	scaffold1221	TRF	Tandem_Repeat	133047	133077	62	+	.	.
scaffold1221	subtractBed	intrn	137038	137830	.	-	.	Parent=CGI_10019734;
	scaffold1221	TRF	Tandem_Repeat	137038	137830	1201	+	.	.
scaffold1221	subtractBed	intrn	174204	174254	.	-	.	Parent=CGI_10019736;
	scaffold1221	TRF	Tandem_Repeat	174204	174254	95	+	.	.
scaffold1221	subtractBed	intrn	237920	237958	.	-	.	Parent=CGI_10019737;
	scaffold1221	TRF	Tandem_Repeat	237920	237958	78	+	.	.
scaffold1221	subtractBed	intrn	303511	303855	.	+	.	Parent=CGI_10019742;
	scaffold1221	WUBlastX	LINE_RTE-X	303511	303855	164	-	.	.
scaffold1221	subtractBed	intrn	303478	303939	.	+	.	Parent=CGI_10019742;
	scaffold1221	WUBlastX	LINE_RTE-X	303478	303939	128	-	.	.
scaffold1221	subtractBed	intrn	320905	320931	.	+	.	Parent=CGI_10019744;
	scaffold1221	TRF	Tandem_Repeat	320905	320931	54	+	.	.
scaffold1221	subtractBed	intrn	321018	321048	.	+	.	Parent=CGI_10019744;
	scaffold1221	TRF	Tandem_Repeat	321018	321048	62	+	.	.
scaffold1221	subtractBed	intrn	382904	383001	.	-	.	Parent=CGI_10019745;
	scaffold1221	TRF	Tandem_Repeat	382904	383001	169	+	.	.
scaffold1221	subtractBed	intrn	390295	390630	.	-	.	Parent=CGI_10019745;
	scaffold1221	WUBlastX	LINE_L1	390295	390630	87	+	.	.
scaffold1221	subtractBed	intrn	390349	390708	.	-	.	Parent=CGI_10019745;
	scaffold1221	WUBlastX	LINE_L1-Tx1	390349	390708	163	+	.	.
scaffold1221	subtractBed	intrn	390749	391723	.	-	.	Parent=CGI_10019745;
	scaffold1221	WUBlastX	LINE_L1-Tx1	390749	391723	85	+	.	.
scaffold1221	subtractBed	intrn	390034	390657	.	-	.	Parent=CGI_10019745;
	scaffold1221	WUBlastX	LINE_L1	390034	390657	30	+	.	.
scaffold1221	subtractBed	intrn	417618	417654	.	-	.	Parent=CGI_10019746;
	scaffold1221	TRF	Tandem_Repeat	417618	417654	67	+	.	.
scaffold1221	subtractBed	intrn	511087	511233	.	-	.	Parent=CGI_10019748;
	scaffold1221	WUBlastX	DNA_PiggyBac	511087	511233	65	-	.	.
scaffold1221	subtractBed	intrn	512102	512206	.	-	.	Parent=CGI_10019748;
	scaffold1221	WUBlastX	DNA_PiggyBac	512102	512206	30	-	.	.
scaffold1221	subtractBed	intrn	512126	512206	.	-	.	Parent=CGI_10019748;
	scaffold1221	WUBlastX	DNA_PiggyBac	512126	512206	37	-	.	.
scaffold1221	subtractBed	intrn	512554	512631	.	-	.	Parent=CGI_10019748;
	scaffold1221	WUBlastX	DNA_PiggyBac	512554	512631	48	-	.	.
scaffold1221	subtractBed	intrn	511248	511319	.	-	.	Parent=CGI_10019748;
	scaffold1221	WUBlastX	DNA_PiggyBac	511248	511319	22	-	.	.
scaffold1221	subtractBed	intrn	524067	524212	.	+	.	Parent=CGI_10019749;
	scaffold1221	TRF	Tandem_Repeat	524067	524212	204	+	.	.
scaffold1221	subtractBed	intrn	523216	523650	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	523216	523650	166	+	.	.
scaffold1221	subtractBed	intrn	523671	523994	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	523671	523994	115	+	.	.
scaffold1221	subtractBed	intrn	523662	524054	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	523662	524054	93	+	.	.
scaffold1221	subtractBed	intrn	526435	526656	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1	526435	526656	36	+	.	.
scaffold1221	subtractBed	intrn	525935	526402	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	525935	526402	60	+	.	.
scaffold1221	subtractBed	intrn	526417	526815	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	526417	526815	22	+	.	.
scaffold1221	subtractBed	intrn	525965	526258	.	+	.	Parent=CGI_10019749;
	scaffold1221	WUBlastX	LINE_L1-Tx1	525965	526258	83	+	.	.
scaffold1221	subtractBed	intrn	533421	533480	.	+	.	Parent=CGI_10019749;
	scaffold1221	TRF	Tandem_Repeat	533421	533480	66	+	.	.
scaffold1221	subtractBed	intrn	535055	535099	.	+	.	Parent=CGI_10019749;
	scaffold1221	TRF	Tandem_Repeat	535055	535099	90	+	.	.
scaffold1222	subtractBed	intrn	20382	20458	.	-	.	Parent=CGI_10016234;
	scaffold1222	TRF	Tandem_Repeat	20382	20458	77	+	.	.
scaffold1222	subtractBed	intrn	20701	20727	.	-	.	Parent=CGI_10016234;
	scaffold1222	TRF	Tandem_Repeat	20701	20727	54	+	.	.
scaffold1222	subtractBed	intrn	20771	20857	.	-	.	Parent=CGI_10016234;
	scaffold1222	TRF	Tandem_Repeat	20771	20857	95	+	.	.
scaffold1222	subtractBed	intrn	20771	20857	.	-	.	Parent=CGI_10016234;
	scaffold1222	TRF	Tandem_Repeat	20771	20857	108	+	.	.
scaffold1222	subtractBed	intrn	22035	22366	.	-	.	Parent=CGI_10016234;
	scaffold1222	TRF	Tandem_Repeat	22035	22366	489	+	.	.
scaffold1222	subtractBed	intrn	77160	77260	.	-	.	Parent=CGI_10016236;
	scaffold1222	TRF	Tandem_Repeat	77160	77260	63	+	.	.
scaffold1222	subtractBed	intrn	75838	76413	.	-	.	Parent=CGI_10016236;
	scaffold1222	WUBlastX	LINE_L2	75838	76413	146	+	.	.
scaffold1222	subtractBed	intrn	76656	77159	.	-	.	Parent=CGI_10016236;
	scaffold1222	WUBlastX	LINE_CR1-L2	76656	77159	181	+	.	.
scaffold1222	subtractBed	intrn	76181	76681	.	-	.	Parent=CGI_10016236;
	scaffold1222	WUBlastX	LINE_L2	76181	76681	279	+	.	.
scaffold1222	subtractBed	intrn	76707	77096	.	-	.	Parent=CGI_10016236;
	scaffold1222	WUBlastX	LINE_L2	76707	77096	221	+	.	.
scaffold1222	subtractBed	intrn	136789	136980	.	+	.	Parent=CGI_10016238;
	scaffold1222	WUBlastX	LINE_RTE-X	136789	136980	165	-	.	.
scaffold1222	subtractBed	intrn	136384	136731	.	+	.	Parent=CGI_10016238;
	scaffold1222	WUBlastX	LINE_RTE-X	136384	136731	183	-	.	.
scaffold1222	subtractBed	intrn	136465	136788	.	+	.	Parent=CGI_10016238;
	scaffold1222	WUBlastX	LINE_L2	136465	136788	41	-	.	.
scaffold1222	subtractBed	intrn	144056	144087	.	+	.	Parent=CGI_10016238;
	scaffold1222	TRF	Tandem_Repeat	144056	144087	64	+	.	.
scaffold1222	subtractBed	intrn	150084	150122	.	+	.	Parent=CGI_10016238;
	scaffold1222	TRF	Tandem_Repeat	150084	150122	78	+	.	.
scaffold1222	subtractBed	intrn	190689	190730	.	-	.	Parent=CGI_10016240;
	scaffold1222	TRF	Tandem_Repeat	190689	190730	84	+	.	.
scaffold1222	subtractBed	intrn	195533	196501	.	-	.	Parent=CGI_10016240;
	scaffold1222	WUBlastX	LINE_CR1-L2	195533	196501	224	-	.	.
scaffold1222	subtractBed	intrn	202043	202081	.	-	.	Parent=CGI_10016240;
	scaffold1222	TRF	Tandem_Repeat	202043	202081	78	+	.	.
scaffold1222	subtractBed	intrn	202590	202634	.	-	.	Parent=CGI_10016240;
	scaffold1222	TRF	Tandem_Repeat	202590	202634	90	+	.	.
scaffold1222	subtractBed	intrn	204574	204645	.	-	.	Parent=CGI_10016240;
	scaffold1222	TRF	Tandem_Repeat	204574	204645	137	+	.	.
scaffold1222	subtractBed	intrn	209704	209776	.	-	.	Parent=CGI_10016240;
	scaffold1222	TRF	Tandem_Repeat	209704	209776	103	+	.	.
scaffold1222	subtractBed	intrn	226618	226799	.	-	.	Parent=CGI_10016241;
	scaffold1222	TRF	Tandem_Repeat	226618	226799	136	+	.	.
scaffold1222	subtractBed	intrn	226621	226804	.	-	.	Parent=CGI_10016241;
	scaffold1222	TRF	Tandem_Repeat	226621	226804	135	+	.	.
scaffold1222	subtractBed	intrn	238784	238815	.	-	.	Parent=CGI_10016242;
	scaffold1222	TRF	Tandem_Repeat	238784	238815	64	+	.	.
scaffold1222	subtractBed	intrn	242455	242488	.	-	.	Parent=CGI_10016242;
	scaffold1222	TRF	Tandem_Repeat	242455	242488	68	+	.	.
scaffold1222	subtractBed	intrn	260945	260990	.	+	.	Parent=CGI_10016243;
	scaffold1222	TRF	Tandem_Repeat	260945	260990	58	+	.	.
scaffold1222	subtractBed	intrn	265582	266442	.	+	.	Parent=CGI_10016243;
	scaffold1222	TRF	Tandem_Repeat	265582	266442	1270	+	.	.
scaffold1222	subtractBed	intrn	278884	279076	.	+	.	Parent=CGI_10016244;
	scaffold1222	TRF	Tandem_Repeat	278884	279076	185	+	.	.
scaffold1222	subtractBed	intrn	280815	281120	.	+	.	Parent=CGI_10016244;
	scaffold1222	TRF	Tandem_Repeat	280806	281120	351	+	.	.
scaffold1222	subtractBed	intrn	294272	294352	.	-	.	Parent=CGI_10016245;
	scaffold1222	TRF	Tandem_Repeat	294272	294352	65	+	.	.
scaffold1222	subtractBed	intrn	295414	296363	.	-	.	Parent=CGI_10016245;
	scaffold1222	TRF	Tandem_Repeat	295414	296363	1261	+	.	.
scaffold1222	subtractBed	intrn	296475	296518	.	-	.	Parent=CGI_10016245;
	scaffold1222	TRF	Tandem_Repeat	296475	296518	79	+	.	.
scaffold1222	subtractBed	intrn	302046	302119	.	-	.	Parent=CGI_10016245;
	scaffold1222	TRF	Tandem_Repeat	302046	302119	132	+	.	.
scaffold1222	subtractBed	intrn	361473	361514	.	-	.	Parent=CGI_10016250;
	scaffold1222	TRF	Tandem_Repeat	361473	361514	59	+	.	.
scaffold1222	subtractBed	intrn	360267	361298	.	-	.	Parent=CGI_10016250;
	scaffold1222	TRF	Tandem_Repeat	360267	361298	1463	+	.	.
scaffold1222	subtractBed	intrn	447316	447574	.	-	.	Parent=CGI_10016253;
	scaffold1222	TRF	Tandem_Repeat	447316	447574	355	+	.	.
scaffold1222	subtractBed	intrn	447316	447574	.	-	.	Parent=CGI_10016253;
	scaffold1222	TRF	Tandem_Repeat	447316	447574	380	+	.	.
scaffold1222	subtractBed	intrn	450479	450531	.	-	.	Parent=CGI_10016253;
	scaffold1222	TRF	Tandem_Repeat	450479	450531	56	+	.	.
scaffold1222	subtractBed	intrn	450498	450531	.	-	.	Parent=CGI_10016253;
	scaffold1222	TRF	Tandem_Repeat	450498	450531	59	+	.	.
scaffold1226	subtractBed	intrn	17071	17200	.	+	.	Parent=CGI_10002681;
	scaffold1226	TRF	Tandem_Repeat	17071	17200	66	+	.	.
scaffold1226	subtractBed	intrn	16992	17201	.	+	.	Parent=CGI_10002681;
	scaffold1226	TRF	Tandem_Repeat	16992	17201	171	+	.	.
scaffold1226	subtractBed	intrn	19890	20225	.	+	.	Parent=CGI_10002681;
	scaffold1226	WUBlastX	DNA_Crypton	19890	20225	99	+	.	.
scaffold1227	subtractBed	intrn	27223	27266	.	-	.	Parent=CGI_10010047;
	scaffold1227	TRF	Tandem_Repeat	27223	27266	88	+	.	.
scaffold1227	subtractBed	intrn	79197	79274	.	+	.	Parent=CGI_10010049;
	scaffold1227	TRF	Tandem_Repeat	79197	79274	131	+	.	.
scaffold1227	subtractBed	intrn	84953	84987	.	+	.	Parent=CGI_10010049;
	scaffold1227	TRF	Tandem_Repeat	84953	84987	70	+	.	.
scaffold1227	subtractBed	intrn	134597	134752	.	-	.	Parent=CGI_10010051;
	scaffold1227	TRF	Tandem_Repeat	134597	134752	278	+	.	.
scaffold1227	subtractBed	intrn	134734	135010	.	-	.	Parent=CGI_10010051;
	scaffold1227	TRF	Tandem_Repeat	134734	135010	355	+	.	.
scaffold1227	subtractBed	intrn	134645	134983	.	-	.	Parent=CGI_10010051;
	scaffold1227	TRF	Tandem_Repeat	134645	134983	298	+	.	.
scaffold1227	subtractBed	intrn	137882	138064	.	-	.	Parent=CGI_10010051;
	scaffold1227	TRF	Tandem_Repeat	137882	138064	330	+	.	.
scaffold1227	subtractBed	intrn	162284	162346	.	-	.	Parent=CGI_10010053;
	scaffold1227	TRF	Tandem_Repeat	162284	162346	108	+	.	.
scaffold1227	subtractBed	intrn	168645	168722	.	-	.	Parent=CGI_10010053;
	scaffold1227	TRF	Tandem_Repeat	168645	168722	156	+	.	.
scaffold1227	subtractBed	intrn	210238	210393	.	+	.	Parent=CGI_10010056;
	scaffold1227	WUBlastX	DNA_Kolobok-Hyd	210238	210393	21	+	.	.
scaffold1227	subtractBed	intrn	210601	210601	.	+	.	Parent=CGI_10010056;
	scaffold1227	WUBlastX	DNA_Kolobok-Hyd	210601	211017	50	+	.	.
scaffold1227	subtractBed	intrn	210250	210369	.	+	.	Parent=CGI_10010056;
	scaffold1227	WUBlastX	DNA_Kolobok-Hyd	210250	210369	40	+	.	.
scaffold1227	subtractBed	intrn	209912	209913	.	+	.	Parent=CGI_10010056;
	scaffold1227	WUBlastX	DNA_Kolobok-Hyd	209851	209913	33	+	.	.
scaffold1227	subtractBed	intrn	210463	210601	.	+	.	Parent=CGI_10010056;
	scaffold1227	WUBlastX	DNA_Kolobok-Hyd	210463	211035	43	+	.	.
scaffold1228	subtractBed	intrn	10954	10988	.	+	.	Parent=CGI_10016977;
	scaffold1228	TRF	Tandem_Repeat	10954	10988	52	+	.	.
scaffold1228	subtractBed	intrn	26052	26541	.	+	.	Parent=CGI_10016978;
	scaffold1228	TRF	Tandem_Repeat	26045	26541	167	+	.	.
scaffold1228	subtractBed	intrn	56127	56310	.	+	.	Parent=CGI_10016980;
	scaffold1228	TRF	Tandem_Repeat	56127	56310	260	+	.	.
scaffold1228	subtractBed	intrn	56127	56310	.	-	.	Parent=CGI_10016981;
	scaffold1228	TRF	Tandem_Repeat	56127	56310	260	+	.	.
scaffold1228	subtractBed	intrn	229552	229606	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	229552	229606	110	+	.	.
scaffold1228	subtractBed	intrn	236968	237041	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	236968	237041	85	+	.	.
scaffold1228	subtractBed	intrn	238894	239651	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	238894	239651	663	+	.	.
scaffold1228	subtractBed	intrn	238894	239973	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	238894	239973	634	+	.	.
scaffold1228	subtractBed	intrn	238894	239973	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	238894	239973	736	+	.	.
scaffold1228	subtractBed	intrn	238910	239954	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	238910	239954	658	+	.	.
scaffold1228	subtractBed	intrn	238898	239642	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	238898	239642	501	+	.	.
scaffold1228	subtractBed	intrn	239690	239973	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	239690	239973	187	+	.	.
scaffold1228	subtractBed	intrn	245074	245312	.	+	.	Parent=CGI_10016988;
	scaffold1228	TRF	Tandem_Repeat	245074	245312	379	+	.	.
scaffold1228	subtractBed	intrn	277592	277637	.	+	.	Parent=CGI_10016992;
	scaffold1228	TRF	Tandem_Repeat	277592	277637	56	+	.	.
scaffold1228	subtractBed	intrn	277592	277648	.	+	.	Parent=CGI_10016992;
	scaffold1228	TRF	Tandem_Repeat	277592	277648	51	+	.	.
scaffold1228	subtractBed	intrn	304188	304213	.	-	.	Parent=CGI_10016993;
	scaffold1228	TRF	Tandem_Repeat	304188	304213	52	+	.	.
scaffold1228	subtractBed	intrn	370051	370096	.	+	.	Parent=CGI_10016997;
	scaffold1228	TRF	Tandem_Repeat	370051	370096	92	+	.	.
scaffold1228	subtractBed	intrn	381455	381521	.	-	.	Parent=CGI_10016998;
	scaffold1228	TRF	Tandem_Repeat	381455	381521	82	+	.	.
scaffold1228	subtractBed	intrn	381455	381521	.	-	.	Parent=CGI_10016998;
	scaffold1228	TRF	Tandem_Repeat	381455	381521	98	+	.	.
scaffold1228	subtractBed	intrn	400897	400938	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	400897	400938	84	+	.	.
scaffold1228	subtractBed	intrn	401873	401913	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	401873	401913	50	+	.	.
scaffold1228	subtractBed	intrn	402675	403314	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	402675	403314	784	+	.	.
scaffold1228	subtractBed	intrn	406322	406349	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	406322	406349	56	+	.	.
scaffold1228	subtractBed	intrn	410203	410633	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	410203	410633	300	+	.	.
scaffold1228	subtractBed	intrn	410227	410633	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	410227	410633	404	+	.	.
scaffold1228	subtractBed	intrn	410235	410633	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	410235	410633	458	+	.	.
scaffold1228	subtractBed	intrn	410203	410628	.	+	.	Parent=CGI_10016999;
	scaffold1228	TRF	Tandem_Repeat	410203	410628	516	+	.	.
scaffold1228	subtractBed	intrn	432923	432982	.	+	.	Parent=CGI_10017002;
	scaffold1228	TRF	Tandem_Repeat	432923	432982	54	+	.	.
scaffold1228	subtractBed	intrn	454435	455652	.	-	.	Parent=CGI_10017004;
	scaffold1228	TRF	Tandem_Repeat	454435	455652	1729	+	.	.
scaffold1228	subtractBed	intrn	455814	455844	.	-	.	Parent=CGI_10017004;
	scaffold1228	TRF	Tandem_Repeat	455814	455844	53	+	.	.
scaffold1228	subtractBed	intrn	468724	468763	.	-	.	Parent=CGI_10017006;
	scaffold1228	TRF	Tandem_Repeat	468724	468763	53	+	.	.
scaffold1228	subtractBed	intrn	473566	473636	.	-	.	Parent=CGI_10017006;
	scaffold1228	TRF	Tandem_Repeat	473566	473636	79	+	.	.
scaffold1228	subtractBed	intrn	474911	475132	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_CR1-L2	474911	475132	56	-	.	.
scaffold1228	subtractBed	intrn	475137	475901	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_L2	475137	475901	398	-	.	.
scaffold1228	subtractBed	intrn	475840	476595	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_L2	475840	476595	522	-	.	.
scaffold1228	subtractBed	intrn	475870	476808	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_CR1-L2	475870	476808	410	-	.	.
scaffold1228	subtractBed	intrn	476933	476995	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_CR1-L2	476933	476995	31	-	.	.
scaffold1228	subtractBed	intrn	476604	476894	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_L2	476604	476894	25	-	.	.
scaffold1228	subtractBed	intrn	477041	477736	.	-	.	Parent=CGI_10017006;
	scaffold1228	WUBlastX	LINE_RTE-X	477041	477736	165	-	.	.
scaffold123	subtractBed	intrn	54913	54952	.	-	.	Parent=CGI_10011071;
	scaffold123	TRF	Tandem_Repeat	54913	54952	53	+	.	.
scaffold123	subtractBed	intrn	112286	113203	.	-	.	Parent=CGI_10011073;
	scaffold123	TRF	Tandem_Repeat	112286	113203	635	+	.	.
scaffold123	subtractBed	intrn	112295	113109	.	-	.	Parent=CGI_10011073;
	scaffold123	TRF	Tandem_Repeat	112295	113109	853	+	.	.
scaffold123	subtractBed	intrn	127990	128065	.	+	.	Parent=CGI_10011074;
	scaffold123	TRF	Tandem_Repeat	127990	128065	152	+	.	.
scaffold123	subtractBed	intrn	129161	129196	.	+	.	Parent=CGI_10011074;
	scaffold123	TRF	Tandem_Repeat	129161	129196	72	+	.	.
scaffold123	subtractBed	intrn	130085	130218	.	+	.	Parent=CGI_10011074;
	scaffold123	TRF	Tandem_Repeat	130085	130218	124	+	.	.
scaffold123	subtractBed	intrn	130551	130580	.	+	.	Parent=CGI_10011074;
	scaffold123	TRF	Tandem_Repeat	130551	130580	51	+	.	.
scaffold123	subtractBed	intrn	134806	134858	.	+	.	Parent=CGI_10011074;
	scaffold123	TRF	Tandem_Repeat	134806	134858	106	+	.	.
scaffold1230	subtractBed	intrn	26185	26921	.	-	.	Parent=CGI_10004422;
	scaffold1230	TRF	Tandem_Repeat	26185	26921	818	+	.	.
scaffold1230	subtractBed	intrn	31546	31580	.	-	.	Parent=CGI_10004422;
	scaffold1230	TRF	Tandem_Repeat	31546	31580	54	+	.	.
scaffold1230	subtractBed	intrn	32020	32052	.	-	.	Parent=CGI_10004422;
	scaffold1230	TRF	Tandem_Repeat	32020	32052	66	+	.	.
scaffold1230	subtractBed	intrn	47984	48008	.	-	.	Parent=CGI_10004422;
	scaffold1230	TRF	Tandem_Repeat	47984	48008	50	+	.	.
scaffold1230	subtractBed	intrn	63646	64101	.	-	.	Parent=CGI_10004423;
	scaffold1230	WUBlastX	LINE_L1-Tx1	63646	64101	384	+	.	.
scaffold1230	subtractBed	intrn	63571	64017	.	-	.	Parent=CGI_10004423;
	scaffold1230	WUBlastX	LINE_L1	63571	64017	72	+	.	.
scaffold1230	subtractBed	intrn	79294	79353	.	-	.	Parent=CGI_10004423;
	scaffold1230	TRF	Tandem_Repeat	79294	79353	120	+	.	.
scaffold1230	subtractBed	intrn	82383	82446	.	-	.	Parent=CGI_10004423;
	scaffold1230	TRF	Tandem_Repeat	82383	82446	92	+	.	.
scaffold1230	subtractBed	intrn	63646	64101	.	+	.	Parent=CGI_10004424;
	scaffold1230	WUBlastX	LINE_L1-Tx1	63646	64101	384	+	.	.
scaffold1230	subtractBed	intrn	63571	64017	.	+	.	Parent=CGI_10004424;
	scaffold1230	WUBlastX	LINE_L1	63571	64017	72	+	.	.
scaffold1231	subtractBed	intrn	33634	33740	.	+	.	Parent=CGI_10004702;
	scaffold1231	TRF	Tandem_Repeat	33634	33740	142	+	.	.
scaffold1231	subtractBed	intrn	35344	35489	.	+	.	Parent=CGI_10004702;
	scaffold1231	TRF	Tandem_Repeat	35344	35489	94	+	.	.
scaffold1231	subtractBed	intrn	35399	35489	.	+	.	Parent=CGI_10004702;
	scaffold1231	TRF	Tandem_Repeat	35399	35489	146	+	.	.
scaffold1231	subtractBed	intrn	88666	88787	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	88666	88787	88	+	.	.
scaffold1231	subtractBed	intrn	92195	92375	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	92195	92375	105	+	.	.
scaffold1231	subtractBed	intrn	94085	94145	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	94085	94145	68	+	.	.
scaffold1231	subtractBed	intrn	94812	94842	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	94812	94842	62	+	.	.
scaffold1231	subtractBed	intrn	101050	101108	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	101050	101108	57	+	.	.
scaffold1231	subtractBed	intrn	101050	101108	.	+	.	Parent=CGI_10004703;
	scaffold1231	TRF	Tandem_Repeat	101050	101108	75	+	.	.
scaffold1231	subtractBed	intrn	105744	105995	.	+	.	Parent=CGI_10004703;
	scaffold1231	WUBlastX	LINE_RTE-BovB	105744	105995	65	+	.	.
scaffold1231	subtractBed	intrn	106436	106615	.	+	.	Parent=CGI_10004703;
	scaffold1231	WUBlastX	LINE_RTE-BovB	106436	106615	57	+	.	.
scaffold1231	subtractBed	intrn	105771	105983	.	+	.	Parent=CGI_10004703;
	scaffold1231	WUBlastX	LINE_RTE-BovB	105771	105983	152	+	.	.
scaffold1231	subtractBed	intrn	106116	106328	.	+	.	Parent=CGI_10004703;
	scaffold1231	WUBlastX	LINE_RTE-BovB	106116	106328	74	+	.	.
scaffold1231	subtractBed	intrn	106264	106434	.	+	.	Parent=CGI_10004703;
	scaffold1231	WUBlastX	LINE_RTE-BovB	106264	106434	36	+	.	.
scaffold1232	subtractBed	intrn	62525	62833	.	-	.	Parent=CGI_10014987;
	scaffold1232	WUBlastX	LTR_Ngaro	62525	62833	44	+	.	.
scaffold1232	subtractBed	intrn	62393	62680	.	-	.	Parent=CGI_10014987;
	scaffold1232	WUBlastX	LTR_Ngaro	62393	62680	36	+	.	.
scaffold1232	subtractBed	intrn	62444	62680	.	-	.	Parent=CGI_10014987;
	scaffold1232	WUBlastX	LTR_Ngaro	62444	62680	53	+	.	.
scaffold1232	subtractBed	intrn	119442	119471	.	-	.	Parent=CGI_10014997;
	scaffold1232	TRF	Tandem_Repeat	119442	119471	60	+	.	.
scaffold1232	subtractBed	intrn	125389	125741	.	-	.	Parent=CGI_10014997;
	scaffold1232	TRF	Tandem_Repeat	125389	125741	253	+	.	.
scaffold1232	subtractBed	intrn	125389	125741	.	-	.	Parent=CGI_10014997;
	scaffold1232	TRF	Tandem_Repeat	125389	125741	323	+	.	.
scaffold1232	subtractBed	intrn	157368	157405	.	-	.	Parent=CGI_10014997;
	scaffold1232	TRF	Tandem_Repeat	157368	157405	67	+	.	.
scaffold1232	subtractBed	intrn	157368	157405	.	+	.	Parent=CGI_10014999;
	scaffold1232	TRF	Tandem_Repeat	157368	157405	67	+	.	.
scaffold1232	subtractBed	intrn	190796	190830	.	+	.	Parent=CGI_10015002;
	scaffold1232	TRF	Tandem_Repeat	190796	190830	70	+	.	.
scaffold1232	subtractBed	intrn	217388	217418	.	+	.	Parent=CGI_10015005;
	scaffold1232	TRF	Tandem_Repeat	217388	217418	53	+	.	.
scaffold1233	subtractBed	intrn	1172	1200	.	-	.	Parent=CGI_10003098;
	scaffold1233	TRF	Tandem_Repeat	1172	1200	58	+	.	.
scaffold1233	subtractBed	intrn	6423	6670	.	-	.	Parent=CGI_10003098;
	scaffold1233	TRF	Tandem_Repeat	6423	6670	424	+	.	.
scaffold1233	subtractBed	intrn	15831	15971	.	-	.	Parent=CGI_10003098;
	scaffold1233	TRF	Tandem_Repeat	15831	15971	129	+	.	.
scaffold1233	subtractBed	intrn	13343	13570	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	DNA_IS4EU	13343	13570	120	-	.	.
scaffold1233	subtractBed	intrn	11448	11573	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	DNA_IS4EU	11448	11573	35	+	.	.
scaffold1233	subtractBed	intrn	12271	12381	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	DNA_IS4EU	12271	12381	31	+	.	.
scaffold1233	subtractBed	intrn	12573	12803	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	DNA_IS4EU	12573	12803	90	+	.	.
scaffold1233	subtractBed	intrn	7663	7875	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	LTR_Ngaro	7663	7875	119	-	.	.
scaffold1233	subtractBed	intrn	7666	7947	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	LTR_Ngaro	7666	7947	66	-	.	.
scaffold1233	subtractBed	intrn	13152	13433	.	-	.	Parent=CGI_10003098;
	scaffold1233	WUBlastX	DNA_IS4EU	13152	13433	170	-	.	.
scaffold1235	subtractBed	intrn	5490	5538	.	-	.	Parent=CGI_10011827;
	scaffold1235	TRF	Tandem_Repeat	5490	5538	89	+	.	.
scaffold1235	subtractBed	intrn	12351	12400	.	-	.	Parent=CGI_10011827;
	scaffold1235	TRF	Tandem_Repeat	12351	12400	66	+	.	.
scaffold1235	subtractBed	intrn	19420	19453	.	-	.	Parent=CGI_10011828;
	scaffold1235	TRF	Tandem_Repeat	19420	19453	68	+	.	.
scaffold1235	subtractBed	intrn	19822	19884	.	-	.	Parent=CGI_10011828;
	scaffold1235	TRF	Tandem_Repeat	19822	19884	101	+	.	.
scaffold1235	subtractBed	intrn	24589	24705	.	-	.	Parent=CGI_10011828;
	scaffold1235	WUBlastX	LTR_Gypsy	24589	25332	23	+	.	.
scaffold1235	subtractBed	intrn	26125	28954	.	-	.	Parent=CGI_10011828;
	scaffold1235	WUBlastX	LTR_Gypsy	26114	28954	2574	+	.	.
scaffold1235	subtractBed	intrn	28457	29047	.	-	.	Parent=CGI_10011828;
	scaffold1235	WUBlastX	LTR_Gypsy	28457	29047	106	+	.	.
scaffold1235	subtractBed	intrn	32897	33454	.	-	.	Parent=CGI_10011828;
	scaffold1235	WUBlastX	LINE_L1-Tx1	32897	33454	73	+	.	.
scaffold1235	subtractBed	intrn	75702	76051	.	+	.	Parent=CGI_10011831;
	scaffold1235	TRF	Tandem_Repeat	75696	76051	508	+	.	.
scaffold1235	subtractBed	intrn	75702	76051	.	+	.	Parent=CGI_10011831;
	scaffold1235	TRF	Tandem_Repeat	75696	76051	536	+	.	.
scaffold1235	subtractBed	intrn	101177	101239	.	+	.	Parent=CGI_10011833;
	scaffold1235	WUBlastX	LINE_RTE-X	101177	101239	21	+	.	.
scaffold1235	subtractBed	intrn	101863	102075	.	+	.	Parent=CGI_10011833;
	scaffold1235	WUBlastX	LINE_RTE-X	101863	102075	80	+	.	.
scaffold1235	subtractBed	intrn	117271	117315	.	+	.	Parent=CGI_10011833;
	scaffold1235	TRF	Tandem_Repeat	117271	117315	90	+	.	.
scaffold1235	subtractBed	intrn	122610	122634	.	+	.	Parent=CGI_10011833;
	scaffold1235	TRF	Tandem_Repeat	122610	122634	50	+	.	.
scaffold1235	subtractBed	intrn	127267	127323	.	+	.	Parent=CGI_10011833;
	scaffold1235	TRF	Tandem_Repeat	127267	127323	89	+	.	.
scaffold1235	subtractBed	intrn	160641	160721	.	-	.	Parent=CGI_10011836;
	scaffold1235	WUBlastX	LINE_L2	160641	160721	24	-	.	.
scaffold1235	subtractBed	intrn	160720	161097	.	-	.	Parent=CGI_10011836;
	scaffold1235	WUBlastX	LINE_L2	160720	161097	29	-	.	.
scaffold1235	subtractBed	intrn	204413	204455	.	-	.	Parent=CGI_10011842;
	scaffold1235	TRF	Tandem_Repeat	204413	204455	86	+	.	.
scaffold1237	subtractBed	intrn	13704	13746	.	-	.	Parent=CGI_10012791;
	scaffold1237	TRF	Tandem_Repeat	13704	13746	86	+	.	.
scaffold1237	subtractBed	intrn	136410	136700	.	-	.	Parent=CGI_10012794;
	scaffold1237	TRF	Tandem_Repeat	136410	136700	357	+	.	.
scaffold1237	subtractBed	intrn	204858	205070	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LINE_L1-Tx1	204858	205070	98	+	.	.
scaffold1237	subtractBed	intrn	204780	205073	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LINE_L1-Tx1	204780	205073	51	+	.	.
scaffold1237	subtractBed	intrn	229313	229366	.	+	.	Parent=CGI_10012796;
	scaffold1237	TRF	Tandem_Repeat	229313	229366	72	+	.	.
scaffold1237	subtractBed	intrn	224046	225794	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	224046	225794	291	-	.	.
scaffold1237	subtractBed	intrn	222452	223138	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	222452	223138	50	-	.	.
scaffold1237	subtractBed	intrn	223708	224433	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	223708	224433	282	-	.	.
scaffold1237	subtractBed	intrn	224433	225776	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	224433	225776	430	-	.	.
scaffold1237	subtractBed	intrn	222155	222307	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	222155	222307	20	-	.	.
scaffold1237	subtractBed	intrn	225806	225997	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	225806	225997	117	-	.	.
scaffold1237	subtractBed	intrn	222557	223474	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	222557	223474	182	-	.	.
scaffold1237	subtractBed	intrn	225997	226269	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	225997	226269	148	-	.	.
scaffold1237	subtractBed	intrn	223030	224421	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	223030	224421	112	-	.	.
scaffold1237	subtractBed	intrn	258907	260229	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_DIRS	258907	260229	741	+	.	.
scaffold1237	subtractBed	intrn	258132	258368	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	258132	258368	28	+	.	.
scaffold1237	subtractBed	intrn	261173	261391	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_DIRS	261173	261391	101	+	.	.
scaffold1237	subtractBed	intrn	258676	259491	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	258676	259491	48	+	.	.
scaffold1237	subtractBed	intrn	258559	259305	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	258559	259305	46	+	.	.
scaffold1237	subtractBed	intrn	258904	261156	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_DIRS	258904	261156	662	+	.	.
scaffold1237	subtractBed	intrn	261182	261442	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_DIRS	261182	261442	78	+	.	.
scaffold1237	subtractBed	intrn	258252	258395	.	+	.	Parent=CGI_10012796;
	scaffold1237	WUBlastX	LTR_Gypsy	258252	258395	21	+	.	.
scaffold1237	subtractBed	intrn	275198	275226	.	+	.	Parent=CGI_10012796;
	scaffold1237	TRF	Tandem_Repeat	275198	275226	58	+	.	.
scaffold1237	subtractBed	intrn	279976	280023	.	+	.	Parent=CGI_10012796;
	scaffold1237	TRF	Tandem_Repeat	279976	280023	51	+	.	.
scaffold1237	subtractBed	intrn	281430	281572	.	+	.	Parent=CGI_10012796;
	scaffold1237	TRF	Tandem_Repeat	281430	281572	108	+	.	.
scaffold1237	subtractBed	intrn	281571	281783	.	+	.	Parent=CGI_10012796;
	scaffold1237	TRF	Tandem_Repeat	281571	281783	98	+	.	.
scaffold1237	subtractBed	intrn	298978	299019	.	-	.	Parent=CGI_10012797;
	scaffold1237	TRF	Tandem_Repeat	298978	299019	84	+	.	.
scaffold1237	subtractBed	intrn	314864	315137	.	-	.	Parent=CGI_10012797;
	scaffold1237	TRF	Tandem_Repeat	314864	315137	147	+	.	.
scaffold1237	subtractBed	intrn	315008	315137	.	-	.	Parent=CGI_10012797;
	scaffold1237	TRF	Tandem_Repeat	315008	315137	145	+	.	.
scaffold1237	subtractBed	intrn	317171	317837	.	-	.	Parent=CGI_10012797;
	scaffold1237	TRF	Tandem_Repeat	317171	317837	1077	+	.	.
scaffold1241	subtractBed	intrn	796	845	.	+	.	Parent=CGI_10016414;
	scaffold1241	TRF	Tandem_Repeat	796	845	73	+	.	.
scaffold1241	subtractBed	intrn	12119	12243	.	+	.	Parent=CGI_10016415;
	scaffold1241	TRF	Tandem_Repeat	12119	12243	67	+	.	.
scaffold1241	subtractBed	intrn	12285	12478	.	+	.	Parent=CGI_10016415;
	scaffold1241	TRF	Tandem_Repeat	12285	12478	199	+	.	.
scaffold1241	subtractBed	intrn	12310	12550	.	+	.	Parent=CGI_10016415;
	scaffold1241	TRF	Tandem_Repeat	12310	12550	161	+	.	.
scaffold1241	subtractBed	intrn	12714	12763	.	+	.	Parent=CGI_10016415;
	scaffold1241	TRF	Tandem_Repeat	12714	12763	100	+	.	.
scaffold1241	subtractBed	intrn	27070	27110	.	+	.	Parent=CGI_10016417;
	scaffold1241	TRF	Tandem_Repeat	27070	27110	73	+	.	.
scaffold1241	subtractBed	intrn	27070	27111	.	+	.	Parent=CGI_10016417;
	scaffold1241	TRF	Tandem_Repeat	27070	27111	57	+	.	.
scaffold1241	subtractBed	intrn	33663	34599	.	-	.	Parent=CGI_10016418;
	scaffold1241	TRF	Tandem_Repeat	33663	34599	586	+	.	.
scaffold1241	subtractBed	intrn	33645	34603	.	-	.	Parent=CGI_10016418;
	scaffold1241	TRF	Tandem_Repeat	33645	34603	684	+	.	.
scaffold1241	subtractBed	intrn	33677	34599	.	-	.	Parent=CGI_10016418;
	scaffold1241	TRF	Tandem_Repeat	33677	34599	638	+	.	.
scaffold1241	subtractBed	intrn	38238	38602	.	-	.	Parent=CGI_10016418;
	scaffold1241	TRF	Tandem_Repeat	38238	38602	642	+	.	.
scaffold1241	subtractBed	intrn	44709	44771	.	-	.	Parent=CGI_10016418;
	scaffold1241	WUBlastX	LTR_DIRS	44709	44771	27	+	.	.
scaffold1241	subtractBed	intrn	40728	44750	.	-	.	Parent=CGI_10016418;
	scaffold1241	WUBlastX	LTR_Gypsy	40728	44750	2062	+	.	.
scaffold1241	subtractBed	intrn	40479	42041	.	-	.	Parent=CGI_10016418;
	scaffold1241	WUBlastX	LTR_Gypsy	40479	42041	257	+	.	.
scaffold1241	subtractBed	intrn	52523	53147	.	-	.	Parent=CGI_10016418;
	scaffold1241	TRF	Tandem_Repeat	52523	53147	911	+	.	.
scaffold1241	subtractBed	intrn	76604	76635	.	-	.	Parent=CGI_10016421;
	scaffold1241	TRF	Tandem_Repeat	76604	76635	64	+	.	.
scaffold1241	subtractBed	intrn	78145	78259	.	-	.	Parent=CGI_10016421;
	scaffold1241	TRF	Tandem_Repeat	78145	78259	74	+	.	.
scaffold1241	subtractBed	intrn	78487	78580	.	-	.	Parent=CGI_10016421;
	scaffold1241	TRF	Tandem_Repeat	78487	78580	50	+	.	.
scaffold1241	subtractBed	intrn	79074	79468	.	-	.	Parent=CGI_10016421;
	scaffold1241	TRF	Tandem_Repeat	79074	79468	592	+	.	.
scaffold1241	subtractBed	intrn	153294	153324	.	+	.	Parent=CGI_10016426;
	scaffold1241	TRF	Tandem_Repeat	153294	153324	53	+	.	.
scaffold1241	subtractBed	intrn	230854	230883	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	230854	230883	60	+	.	.
scaffold1241	subtractBed	intrn	245143	245211	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	245143	245211	72	+	.	.
scaffold1241	subtractBed	intrn	246129	246180	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	246129	246180	104	+	.	.
scaffold1241	subtractBed	intrn	248004	248040	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	248004	248040	74	+	.	.
scaffold1241	subtractBed	intrn	248271	248391	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	248271	248391	131	+	.	.
scaffold1241	subtractBed	intrn	255971	256024	.	-	.	Parent=CGI_10016431;
	scaffold1241	TRF	Tandem_Repeat	255971	256024	74	+	.	.
scaffold1241	subtractBed	intrn	260250	260366	.	-	.	Parent=CGI_10016431;
	scaffold1241	WUBlastX	LINE_RTE-X	260250	260366	29	+	.	.
scaffold1241	subtractBed	intrn	260390	260518	.	-	.	Parent=CGI_10016431;
	scaffold1241	WUBlastX	LINE_RTE-X	260390	260518	50	+	.	.
scaffold1241	subtractBed	intrn	260396	260545	.	-	.	Parent=CGI_10016431;
	scaffold1241	WUBlastX	LINE_RTE-X	260396	260545	34	+	.	.
scaffold1241	subtractBed	intrn	330764	330934	.	+	.	Parent=CGI_10016436;
	scaffold1241	WUBlastX	LINE_L2	330764	330934	22	+	.	.
scaffold1241	subtractBed	intrn	331492	332895	.	+	.	Parent=CGI_10016436;
	scaffold1241	WUBlastX	LINE_RTE-X	331492	332895	620	+	.	.
scaffold1241	subtractBed	intrn	330448	330513	.	+	.	Parent=CGI_10016436;
	scaffold1241	WUBlastX	LINE_L1	330448	330513	25	+	.	.
scaffold1241	subtractBed	intrn	375158	375200	.	-	.	Parent=CGI_10016437;
	scaffold1241	TRF	Tandem_Repeat	375158	375200	79	+	.	.
scaffold1241	subtractBed	intrn	386050	386122	.	-	.	Parent=CGI_10016437;
	scaffold1241	TRF	Tandem_Repeat	386050	386122	128	+	.	.
scaffold1244	subtractBed	intrn	18161	18269	.	+	.	Parent=CGI_10020816;
	scaffold1244	TRF	Tandem_Repeat	18161	18269	109	+	.	.
scaffold1244	subtractBed	intrn	92903	92935	.	+	.	Parent=CGI_10020820;
	scaffold1244	TRF	Tandem_Repeat	92903	92935	66	+	.	.
scaffold1244	subtractBed	intrn	100891	101167	.	+	.	Parent=CGI_10020820;
	scaffold1244	TRF	Tandem_Repeat	100891	101167	527	+	.	.
scaffold1244	subtractBed	intrn	99931	100122	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1	99931	100122	61	+	.	.
scaffold1244	subtractBed	intrn	99599	99844	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1-Tx1	99599	99844	92	+	.	.
scaffold1244	subtractBed	intrn	99832	100119	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1-Tx1	99832	100119	56	+	.	.
scaffold1244	subtractBed	intrn	99539	99787	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1-Tx1	99539	99787	56	+	.	.
scaffold1244	subtractBed	intrn	100098	100226	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1	100098	100226	24	+	.	.
scaffold1244	subtractBed	intrn	99417	99566	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1	99417	99566	21	+	.	.
scaffold1244	subtractBed	intrn	99456	99581	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1-Tx1	99456	99581	39	+	.	.
scaffold1244	subtractBed	intrn	99486	99644	.	+	.	Parent=CGI_10020820;
	scaffold1244	WUBlastX	LINE_L1-Tx1	99486	99644	49	+	.	.
scaffold1244	subtractBed	intrn	125343	126143	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	125343	126143	886	-	.	.
scaffold1244	subtractBed	intrn	126997	127155	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	126997	127155	80	-	.	.
scaffold1244	subtractBed	intrn	123312	123701	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	123312	123701	83	-	.	.
scaffold1244	subtractBed	intrn	127697	127909	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	127697	127909	125	-	.	.
scaffold1244	subtractBed	intrn	127405	128175	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	127405	128175	110	-	.	.
scaffold1244	subtractBed	intrn	124432	124518	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_ERV1	124432	124518	28	-	.	.
scaffold1244	subtractBed	intrn	123309	123623	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	123309	123623	95	-	.	.
scaffold1244	subtractBed	intrn	124927	125337	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	124927	125337	376	-	.	.
scaffold1244	subtractBed	intrn	126543	126998	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	126543	126998	162	-	.	.
scaffold1244	subtractBed	intrn	122136	123572	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	122136	123572	500	-	.	.
scaffold1244	subtractBed	intrn	126140	126520	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	126140	126520	231	-	.	.
scaffold1244	subtractBed	intrn	124843	125334	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	124843	125334	140	-	.	.
scaffold1244	subtractBed	intrn	124425	124466	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	124425	124466	20	-	.	.
scaffold1244	subtractBed	intrn	121992	122834	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	121992	122834	46	-	.	.
scaffold1244	subtractBed	intrn	125151	126143	.	+	.	Parent=CGI_10020823;
	scaffold1244	WUBlastX	LTR_Gypsy	125151	126143	520	-	.	.
scaffold1244	subtractBed	intrn	235485	235514	.	+	.	Parent=CGI_10020830;
	scaffold1244	TRF	Tandem_Repeat	235485	235514	60	+	.	.
scaffold1244	subtractBed	intrn	283255	283297	.	+	.	Parent=CGI_10020831;
	scaffold1244	TRF	Tandem_Repeat	283255	283297	70	+	.	.
scaffold1244	subtractBed	intrn	318026	318123	.	+	.	Parent=CGI_10020832;
	scaffold1244	TRF	Tandem_Repeat	318026	318123	56	+	.	.
scaffold1244	subtractBed	intrn	320211	320249	.	+	.	Parent=CGI_10020832;
	scaffold1244	TRF	Tandem_Repeat	320211	320249	78	+	.	.
scaffold1244	subtractBed	intrn	490607	490648	.	+	.	Parent=CGI_10020836;
	scaffold1244	TRF	Tandem_Repeat	490607	490648	59	+	.	.
scaffold1244	subtractBed	intrn	543790	544193	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	543790	544193	538	+	.	.
scaffold1244	subtractBed	intrn	545183	545429	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	545183	545429	359	+	.	.
scaffold1244	subtractBed	intrn	545183	545764	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	545183	545764	606	+	.	.
scaffold1244	subtractBed	intrn	545429	545764	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	545429	545764	384	+	.	.
scaffold1244	subtractBed	intrn	546132	546292	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	546132	546292	227	+	.	.
scaffold1244	subtractBed	intrn	555853	555878	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	555853	555878	52	+	.	.
scaffold1244	subtractBed	intrn	561241	561272	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	561241	561272	57	+	.	.
scaffold1244	subtractBed	intrn	566728	566775	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	566728	566775	87	+	.	.
scaffold1244	subtractBed	intrn	573290	573417	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	573290	573417	91	+	.	.
scaffold1244	subtractBed	intrn	572056	572238	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	572056	572238	39	-	.	.
scaffold1244	subtractBed	intrn	571436	572038	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	571436	572038	272	-	.	.
scaffold1244	subtractBed	intrn	572053	572199	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	572053	572199	43	-	.	.
scaffold1244	subtractBed	intrn	570795	571025	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	570795	571025	87	-	.	.
scaffold1244	subtractBed	intrn	570992	572014	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	570992	572014	163	-	.	.
scaffold1244	subtractBed	intrn	571286	572017	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	571286	572017	166	-	.	.
scaffold1244	subtractBed	intrn	570681	570914	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	570681	570914	30	-	.	.
scaffold1244	subtractBed	intrn	572029	572175	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	LINE_Penelope	572029	572175	76	-	.	.
scaffold1244	subtractBed	intrn	589044	589095	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	589044	589095	86	+	.	.
scaffold1244	subtractBed	intrn	599275	599306	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	599275	599306	64	+	.	.
scaffold1244	subtractBed	intrn	605184	605582	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	DNA_IS4EU	605184	605582	64	+	.	.
scaffold1244	subtractBed	intrn	605998	606171	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	DNA_IS4EU	605998	606171	65	+	.	.
scaffold1244	subtractBed	intrn	605091	605582	.	-	.	Parent=CGI_10020838;
	scaffold1244	WUBlastX	DNA_Kolobok-IS4	605091	605582	41	+	.	.
scaffold1244	subtractBed	intrn	609369	609395	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	609369	609395	54	+	.	.
scaffold1244	subtractBed	intrn	611268	611935	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	611268	611935	900	+	.	.
scaffold1244	subtractBed	intrn	615851	615900	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	615851	615900	91	+	.	.
scaffold1244	subtractBed	intrn	625367	625409	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	625367	625409	54	+	.	.
scaffold1244	subtractBed	intrn	627382	627453	.	-	.	Parent=CGI_10020838;
	scaffold1244	TRF	Tandem_Repeat	627382	627453	58	+	.	.
scaffold1244	subtractBed	intrn	657063	657095	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	657063	657095	66	+	.	.
scaffold1244	subtractBed	intrn	660145	660665	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	660145	660665	493	+	.	.
scaffold1244	subtractBed	intrn	660133	661092	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	660133	661092	621	+	.	.
scaffold1244	subtractBed	intrn	660124	662002	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	660124	662002	907	+	.	.
scaffold1244	subtractBed	intrn	660727	661083	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	660727	661083	261	+	.	.
scaffold1244	subtractBed	intrn	661627	662005	.	-	.	Parent=CGI_10020840;
	scaffold1244	TRF	Tandem_Repeat	661627	662005	495	+	.	.
scaffold1245	subtractBed	intrn	10040	10848	.	-	.	Parent=CGI_10009218;
	scaffold1245	TRF	Tandem_Repeat	10040	10848	703	+	.	.
scaffold1245	subtractBed	intrn	18684	18785	.	-	.	Parent=CGI_10009218;
	scaffold1245	WUBlastX	LINE_CR1-L2	18684	18785	55	+	.	.
scaffold1245	subtractBed	intrn	18826	18927	.	-	.	Parent=CGI_10009218;
	scaffold1245	WUBlastX	LINE_CR1-L2	18826	18927	34	+	.	.
scaffold1245	subtractBed	intrn	104370	104651	.	-	.	Parent=CGI_10009226;
	scaffold1245	WUBlastX	DNA_TcMar-Marin	104370	104651	28	-	.	.
scaffold1245	subtractBed	intrn	104370	104831	.	-	.	Parent=CGI_10009226;
	scaffold1245	WUBlastX	DNA_TcMar-Marin	104370	104831	22	-	.	.
scaffold1245	subtractBed	intrn	104433	104660	.	-	.	Parent=CGI_10009226;
	scaffold1245	WUBlastX	DNA_TcMar-Marin	104433	104660	53	-	.	.
scaffold1245	subtractBed	intrn	104150	104362	.	-	.	Parent=CGI_10009226;
	scaffold1245	WUBlastX	DNA_TcMar-Marin	104150	104362	49	-	.	.
scaffold1245	subtractBed	intrn	104517	104654	.	-	.	Parent=CGI_10009226;
	scaffold1245	WUBlastX	DNA_TcMar-Marin	104517	104654	61	-	.	.
scaffold1245	subtractBed	intrn	109715	109780	.	-	.	Parent=CGI_10009226;
	scaffold1245	TRF	Tandem_Repeat	109715	109780	123	+	.	.
scaffold1245	subtractBed	intrn	115954	115999	.	-	.	Parent=CGI_10009226;
	scaffold1245	TRF	Tandem_Repeat	115954	115999	92	+	.	.
scaffold1245	subtractBed	intrn	125302	126239	.	-	.	Parent=CGI_10009227;
	scaffold1245	TRF	Tandem_Repeat	125302	126239	941	+	.	.
scaffold1245	subtractBed	intrn	177575	177663	.	+	.	Parent=CGI_10009229;
	scaffold1245	TRF	Tandem_Repeat	177575	177663	79	+	.	.
scaffold1247	subtractBed	intrn	109196	109231	.	-	.	Parent=CGI_10008945;
	scaffold1247	TRF	Tandem_Repeat	109196	109231	72	+	.	.
scaffold1247	subtractBed	intrn	112215	112400	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	LINE_L1-Tx1	112215	112400	30	+	.	.
scaffold1247	subtractBed	intrn	113688	113966	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	DNA_TcMar-Tc1	113688	113966	39	+	.	.
scaffold1247	subtractBed	intrn	112649	113146	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	LINE_L1	112649	113146	61	+	.	.
scaffold1247	subtractBed	intrn	112751	113146	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	LINE_L1-Tx1	112751	113146	83	+	.	.
scaffold1247	subtractBed	intrn	112766	113230	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	LINE_L1-Tx1	112766	113230	25	+	.	.
scaffold1247	subtractBed	intrn	113982	114248	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	DNA_TcMar-Tc1	113982	114248	157	+	.	.
scaffold1247	subtractBed	intrn	113832	114248	.	-	.	Parent=CGI_10008945;
	scaffold1247	WUBlastX	DNA_TcMar-Tc1	113832	114248	142	+	.	.
scaffold1247	subtractBed	intrn	131738	131764	.	+	.	Parent=CGI_10008946;
	scaffold1247	TRF	Tandem_Repeat	131738	131764	54	+	.	.
scaffold1247	subtractBed	intrn	133500	133727	.	+	.	Parent=CGI_10008946;
	scaffold1247	TRF	Tandem_Repeat	133500	133727	167	+	.	.
scaffold1247	subtractBed	intrn	142100	143271	.	+	.	Parent=CGI_10008946;
	scaffold1247	TRF	Tandem_Repeat	142100	143271	1736	+	.	.
scaffold1247	subtractBed	intrn	145236	145278	.	+	.	Parent=CGI_10008946;
	scaffold1247	TRF	Tandem_Repeat	145236	145278	86	+	.	.
scaffold1247	subtractBed	intrn	145327	145366	.	+	.	Parent=CGI_10008946;
	scaffold1247	TRF	Tandem_Repeat	145327	145366	71	+	.	.
scaffold1247	subtractBed	intrn	145236	145278	.	-	.	Parent=CGI_10008947;
	scaffold1247	TRF	Tandem_Repeat	145236	145278	86	+	.	.
scaffold1247	subtractBed	intrn	145327	145366	.	-	.	Parent=CGI_10008947;
	scaffold1247	TRF	Tandem_Repeat	145327	145366	71	+	.	.
scaffold1247	subtractBed	intrn	181691	181716	.	-	.	Parent=CGI_10008950;
	scaffold1247	TRF	Tandem_Repeat	181691	181716	52	+	.	.
scaffold1247	subtractBed	intrn	182961	183137	.	-	.	Parent=CGI_10008950;
	scaffold1247	WUBlastX	DNA_TcMar-Tc1	182961	183137	58	+	.	.
scaffold1247	subtractBed	intrn	181983	182192	.	-	.	Parent=CGI_10008950;
	scaffold1247	WUBlastX	DNA_TcMar-Tc1	181983	182192	73	+	.	.
scaffold1247	subtractBed	intrn	180915	181172	.	-	.	Parent=CGI_10008950;
	scaffold1247	WUBlastX	DNA_MuDR	180915	181172	64	-	.	.
scaffold1249	subtractBed	intrn	2370	2415	.	-	.	Parent=CGI_10019043;
	scaffold1249	TRF	Tandem_Repeat	2370	2415	83	+	.	.
scaffold1249	subtractBed	intrn	4391	4430	.	-	.	Parent=CGI_10019043;
	scaffold1249	TRF	Tandem_Repeat	4391	4430	80	+	.	.
scaffold1249	subtractBed	intrn	55625	55670	.	-	.	Parent=CGI_10019045;
	scaffold1249	TRF	Tandem_Repeat	55625	55670	92	+	.	.
scaffold1249	subtractBed	intrn	62827	62892	.	-	.	Parent=CGI_10019045;
	scaffold1249	TRF	Tandem_Repeat	62827	62892	123	+	.	.
scaffold1249	subtractBed	intrn	62827	62892	.	+	.	Parent=CGI_10019046;
	scaffold1249	TRF	Tandem_Repeat	62827	62892	123	+	.	.
scaffold1249	subtractBed	intrn	74764	74812	.	+	.	Parent=CGI_10019046;
	scaffold1249	TRF	Tandem_Repeat	74764	74812	98	+	.	.
scaffold1249	subtractBed	intrn	90234	90269	.	-	.	Parent=CGI_10019047;
	scaffold1249	TRF	Tandem_Repeat	90234	90269	72	+	.	.
scaffold1249	subtractBed	intrn	105407	105462	.	-	.	Parent=CGI_10019048;
	scaffold1249	TRF	Tandem_Repeat	105407	105462	112	+	.	.
scaffold1249	subtractBed	intrn	126015	126073	.	+	.	Parent=CGI_10019051;
	scaffold1249	TRF	Tandem_Repeat	126015	126073	118	+	.	.
scaffold1249	subtractBed	intrn	128541	129923	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	128541	129923	911	+	.	.
scaffold1249	subtractBed	intrn	129898	130281	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	129898	130281	182	+	.	.
scaffold1249	subtractBed	intrn	130036	130407	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	130036	130407	100	+	.	.
scaffold1249	subtractBed	intrn	128253	129914	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	128253	129914	719	+	.	.
scaffold1249	subtractBed	intrn	129970	130338	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	129970	130338	106	+	.	.
scaffold1249	subtractBed	intrn	127868	127942	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_DRE	127868	127942	23	+	.	.
scaffold1249	subtractBed	intrn	128571	130214	.	+	.	Parent=CGI_10019051;
	scaffold1249	WUBlastX	LINE_RTE-X	128571	130214	454	+	.	.
scaffold1249	subtractBed	intrn	207088	207208	.	-	.	Parent=CGI_10019056;
	scaffold1249	TRF	Tandem_Repeat	207088	207208	161	+	.	.
scaffold1249	subtractBed	intrn	207732	207797	.	-	.	Parent=CGI_10019056;
	scaffold1249	TRF	Tandem_Repeat	207732	207797	132	+	.	.
scaffold1249	subtractBed	intrn	208915	208981	.	-	.	Parent=CGI_10019056;
	scaffold1249	TRF	Tandem_Repeat	208915	208981	98	+	.	.
scaffold1249	subtractBed	intrn	254780	255007	.	-	.	Parent=CGI_10019058;
	scaffold1249	TRF	Tandem_Repeat	254780	255007	293	+	.	.
scaffold1249	subtractBed	intrn	254783	254933	.	-	.	Parent=CGI_10019058;
	scaffold1249	TRF	Tandem_Repeat	254783	254933	59	+	.	.
scaffold1249	subtractBed	intrn	254780	255049	.	-	.	Parent=CGI_10019058;
	scaffold1249	TRF	Tandem_Repeat	254780	255049	154	+	.	.
scaffold1249	subtractBed	intrn	261492	261569	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_L2	261492	261569	22	-	.	.
scaffold1249	subtractBed	intrn	259651	260139	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_CR1-L2	259651	260139	22	-	.	.
scaffold1249	subtractBed	intrn	260138	260662	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_CR1-L2	260138	260662	249	-	.	.
scaffold1249	subtractBed	intrn	259781	260641	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_CR1-L2	259781	260641	198	-	.	.
scaffold1249	subtractBed	intrn	260159	260878	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_CR1	260159	260878	55	-	.	.
scaffold1249	subtractBed	intrn	260900	260950	.	-	.	Parent=CGI_10019058;
	scaffold1249	WUBlastX	LINE_L2	260900	260950	20	-	.	.
scaffold1249	subtractBed	intrn	262137	262460	.	-	.	Parent=CGI_10019058;
	scaffold1249	TRF	Tandem_Repeat	262137	262460	425	+	.	.
scaffold1249	subtractBed	intrn	272171	272972	.	-	.	Parent=CGI_10019059;
	scaffold1249	TRF	Tandem_Repeat	272171	272972	774	+	.	.
scaffold1249	subtractBed	intrn	326195	326347	.	+	.	Parent=CGI_10019062;
	scaffold1249	TRF	Tandem_Repeat	326195	326347	207	+	.	.
scaffold1249	subtractBed	intrn	367529	367573	.	+	.	Parent=CGI_10019065;
	scaffold1249	TRF	Tandem_Repeat	367529	367573	81	+	.	.
scaffold1249	subtractBed	intrn	386391	386477	.	+	.	Parent=CGI_10019067;
	scaffold1249	TRF	Tandem_Repeat	386391	386477	65	+	.	.
scaffold1249	subtractBed	intrn	419507	419565	.	+	.	Parent=CGI_10019070;
	scaffold1249	TRF	Tandem_Repeat	419507	419565	84	+	.	.
scaffold1249	subtractBed	intrn	487506	487548	.	-	.	Parent=CGI_10019075;
	scaffold1249	TRF	Tandem_Repeat	487506	487548	86	+	.	.
scaffold1249	subtractBed	intrn	488069	488109	.	-	.	Parent=CGI_10019075;
	scaffold1249	TRF	Tandem_Repeat	488069	488109	82	+	.	.
scaffold1249	subtractBed	intrn	532766	532961	.	+	.	Parent=CGI_10019079;
	scaffold1249	TRF	Tandem_Repeat	532766	532961	177	+	.	.
scaffold1249	subtractBed	intrn	574140	574185	.	+	.	Parent=CGI_10019081;
	scaffold1249	TRF	Tandem_Repeat	574140	574185	74	+	.	.
scaffold1250	subtractBed	intrn	53147	53185	.	-	.	Parent=CGI_10004325;
	scaffold1250	TRF	Tandem_Repeat	53147	53185	51	+	.	.
scaffold1250	subtractBed	intrn	62009	62037	.	-	.	Parent=CGI_10004325;
	scaffold1250	TRF	Tandem_Repeat	62009	62037	58	+	.	.
scaffold1250	subtractBed	intrn	67527	67570	.	-	.	Parent=CGI_10004325;
	scaffold1250	TRF	Tandem_Repeat	67527	67570	70	+	.	.
scaffold1251	subtractBed	intrn	26976	27015	.	-	.	Parent=CGI_10004009;
	scaffold1251	TRF	Tandem_Repeat	26976	27015	80	+	.	.
scaffold1251	subtractBed	intrn	49405	49489	.	-	.	Parent=CGI_10004010;
	scaffold1251	TRF	Tandem_Repeat	49405	49489	170	+	.	.
scaffold1251	subtractBed	intrn	80793	81527	.	-	.	Parent=CGI_10004011;
	scaffold1251	TRF	Tandem_Repeat	80793	81527	725	+	.	.
scaffold1251	subtractBed	intrn	84675	84738	.	-	.	Parent=CGI_10004011;
	scaffold1251	TRF	Tandem_Repeat	84675	84738	92	+	.	.
scaffold1251	subtractBed	intrn	84666	84729	.	-	.	Parent=CGI_10004011;
	scaffold1251	TRF	Tandem_Repeat	84666	84729	92	+	.	.
scaffold1252	subtractBed	intrn	7183	7324	.	+	.	Parent=CGI_10013115;
	scaffold1252	TRF	Tandem_Repeat	7173	7324	187	+	.	.
scaffold1252	subtractBed	intrn	99968	100058	.	+	.	Parent=CGI_10013116;
	scaffold1252	TRF	Tandem_Repeat	99968	100058	110	+	.	.
scaffold1252	subtractBed	intrn	106514	106567	.	+	.	Parent=CGI_10013116;
	scaffold1252	TRF	Tandem_Repeat	106514	106567	99	+	.	.
scaffold1252	subtractBed	intrn	125979	126009	.	+	.	Parent=CGI_10013117;
	scaffold1252	TRF	Tandem_Repeat	125979	126009	53	+	.	.
scaffold1252	subtractBed	intrn	125979	126013	.	+	.	Parent=CGI_10013117;
	scaffold1252	TRF	Tandem_Repeat	125979	126013	52	+	.	.
scaffold1252	subtractBed	intrn	126011	126229	.	+	.	Parent=CGI_10013117;
	scaffold1252	TRF	Tandem_Repeat	126011	126229	377	+	.	.
scaffold1252	subtractBed	intrn	153401	154438	.	-	.	Parent=CGI_10013119;
	scaffold1252	TRF	Tandem_Repeat	153401	154438	1872	+	.	.
scaffold1252	subtractBed	intrn	154599	154640	.	-	.	Parent=CGI_10013119;
	scaffold1252	TRF	Tandem_Repeat	154599	154640	56	+	.	.
scaffold1252	subtractBed	intrn	160139	160250	.	-	.	Parent=CGI_10013119;
	scaffold1252	TRF	Tandem_Repeat	160139	160250	197	+	.	.
scaffold1252	subtractBed	intrn	263981	264215	.	+	.	Parent=CGI_10013121;
	scaffold1252	TRF	Tandem_Repeat	263981	264215	164	+	.	.
scaffold1252	subtractBed	intrn	265588	265708	.	+	.	Parent=CGI_10013121;
	scaffold1252	TRF	Tandem_Repeat	265588	265708	169	+	.	.
scaffold1252	subtractBed	intrn	267984	268038	.	+	.	Parent=CGI_10013121;
	scaffold1252	TRF	Tandem_Repeat	267984	268038	110	+	.	.
scaffold1252	subtractBed	intrn	298862	298916	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	298862	298916	110	+	.	.
scaffold1252	subtractBed	intrn	299444	300425	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	299444	300425	1319	+	.	.
scaffold1252	subtractBed	intrn	304045	304162	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	304045	304162	69	+	.	.
scaffold1252	subtractBed	intrn	304779	304844	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	304779	304844	98	+	.	.
scaffold1252	subtractBed	intrn	329860	331114	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	329860	331114	1748	+	.	.
scaffold1252	subtractBed	intrn	332340	332397	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	332340	332397	73	+	.	.
scaffold1252	subtractBed	intrn	332340	332391	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	332340	332391	86	+	.	.
scaffold1252	subtractBed	intrn	341518	341552	.	-	.	Parent=CGI_10013124;
	scaffold1252	TRF	Tandem_Repeat	341518	341552	70	+	.	.
scaffold1252	subtractBed	intrn	341848	342546	.	-	.	Parent=CGI_10013124;
	scaffold1252	WUBlastX	LINE_RTE-X	341848	342546	212	-	.	.
scaffold1253	subtractBed	intrn	27556	27667	.	+	.	Parent=CGI_10004818;
	scaffold1253	TRF	Tandem_Repeat	27556	27667	82	+	.	.
scaffold1253	subtractBed	intrn	27830	27893	.	+	.	Parent=CGI_10004818;
	scaffold1253	TRF	Tandem_Repeat	27830	27893	83	+	.	.
scaffold1253	subtractBed	intrn	27820	27900	.	+	.	Parent=CGI_10004818;
	scaffold1253	TRF	Tandem_Repeat	27820	27900	72	+	.	.
scaffold1253	subtractBed	intrn	38440	38466	.	+	.	Parent=CGI_10004818;
	scaffold1253	TRF	Tandem_Repeat	38440	38466	54	+	.	.
scaffold1253	subtractBed	intrn	41868	43061	.	+	.	Parent=CGI_10004818;
	scaffold1253	WUBlastX	LTR_Gypsy	41868	43061	149	+	.	.
scaffold1253	subtractBed	intrn	42057	43676	.	+	.	Parent=CGI_10004818;
	scaffold1253	WUBlastX	LTR_Gypsy	42057	43676	1348	+	.	.
scaffold1253	subtractBed	intrn	43788	43817	.	+	.	Parent=CGI_10004818;
	scaffold1253	WUBlastX	LTR_Copia	43788	43817	22	+	.	.
scaffold1253	subtractBed	intrn	41178	41243	.	+	.	Parent=CGI_10004818;
	scaffold1253	WUBlastX	LTR_Gypsy	41178	41243	29	+	.	.
scaffold1253	subtractBed	intrn	41190	41243	.	+	.	Parent=CGI_10004818;
	scaffold1253	WUBlastX	LTR_Gypsy	41190	41243	38	+	.	.
scaffold1253	subtractBed	intrn	105893	106061	.	-	.	Parent=CGI_10004823;
	scaffold1253	TRF	Tandem_Repeat	105893	106061	302	+	.	.
scaffold1253	subtractBed	intrn	109349	109537	.	-	.	Parent=CGI_10004823;
	scaffold1253	WUBlastX	LINE_RTE-BovB	109349	109537	51	+	.	.
scaffold1253	subtractBed	intrn	109340	109591	.	-	.	Parent=CGI_10004823;
	scaffold1253	WUBlastX	LINE_RTE-BovB	109340	109591	47	+	.	.
scaffold1255	subtractBed	intrn	3822	3989	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	3822	3989	91	-	.	.
scaffold1255	subtractBed	intrn	4139	4139	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4139	4312	74	-	.	.
scaffold1255	subtractBed	intrn	4312	4333	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4175	4333	88	-	.	.
scaffold1255	subtractBed	intrn	4312	4312	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4139	4312	74	-	.	.
scaffold1255	subtractBed	intrn	4312	4503	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4244	4744	53	-	.	.
scaffold1255	subtractBed	intrn	4747	4747	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4508	4747	122	-	.	.
scaffold1255	subtractBed	intrn	4834	4841	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4834	5031	107	-	.	.
scaffold1255	subtractBed	intrn	5029	5031	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4834	5031	107	-	.	.
scaffold1255	subtractBed	intrn	5250	5780	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	5250	5780	239	-	.	.
scaffold1255	subtractBed	intrn	5029	5082	.	-	.	Parent=CGI_10018055;
	scaffold1255	WUBlastX	DNA_Kolobok	4843	5082	79	-	.	.
scaffold1255	subtractBed	intrn	33350	33547	.	-	.	Parent=CGI_10018057;
	scaffold1255	TRF	Tandem_Repeat	33350	33547	191	+	.	.
scaffold1255	subtractBed	intrn	36175	36366	.	-	.	Parent=CGI_10018057;
	scaffold1255	TRF	Tandem_Repeat	36175	36366	182	+	.	.
scaffold1255	subtractBed	intrn	36915	37082	.	-	.	Parent=CGI_10018057;
	scaffold1255	TRF	Tandem_Repeat	36915	37096	188	+	.	.
scaffold1255	subtractBed	intrn	57844	57874	.	+	.	Parent=CGI_10018058;
	scaffold1255	TRF	Tandem_Repeat	57844	57874	55	+	.	.
scaffold1255	subtractBed	intrn	171563	172312	.	-	.	Parent=CGI_10018063;
	scaffold1255	TRF	Tandem_Repeat	171563	172312	1069	+	.	.
scaffold1255	subtractBed	intrn	173735	173792	.	-	.	Parent=CGI_10018063;
	scaffold1255	TRF	Tandem_Repeat	173735	173792	100	+	.	.
scaffold1255	subtractBed	intrn	173738	173791	.	-	.	Parent=CGI_10018063;
	scaffold1255	TRF	Tandem_Repeat	173738	173791	65	+	.	.
scaffold1255	subtractBed	intrn	293945	294330	.	+	.	Parent=CGI_10018074;
	scaffold1255	TRF	Tandem_Repeat	293945	294330	772	+	.	.
scaffold1255	subtractBed	intrn	305281	305339	.	-	.	Parent=CGI_10018075;
	scaffold1255	TRF	Tandem_Repeat	305281	305339	91	+	.	.
scaffold1255	subtractBed	intrn	305273	305342	.	-	.	Parent=CGI_10018075;
	scaffold1255	TRF	Tandem_Repeat	305273	305342	97	+	.	.
scaffold1255	subtractBed	intrn	305273	305342	.	-	.	Parent=CGI_10018075;
	scaffold1255	TRF	Tandem_Repeat	305273	305342	79	+	.	.
scaffold1255	subtractBed	intrn	305512	307024	.	-	.	Parent=CGI_10018075;
	scaffold1255	TRF	Tandem_Repeat	305512	307024	2108	+	.	.
scaffold1255	subtractBed	intrn	377258	378478	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	DNA_hAT	377258	378478	257	-	.	.
scaffold1255	subtractBed	intrn	379013	379195	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	DNA_hAT	379013	379195	57	-	.	.
scaffold1255	subtractBed	intrn	386159	386164	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	DNA_hAT	385091	386164	201	-	.	.
scaffold1255	subtractBed	intrn	386230	386253	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	DNA_hAT	386230	386445	74	-	.	.
scaffold1255	subtractBed	intrn	386436	386445	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	DNA_hAT	386230	386445	74	-	.	.
scaffold1255	subtractBed	intrn	392496	392702	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	392496	392702	26	+	.	.
scaffold1255	subtractBed	intrn	392466	392657	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	392466	392657	22	+	.	.
scaffold1255	subtractBed	intrn	392693	393196	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	392693	393196	30	+	.	.
scaffold1255	subtractBed	intrn	397143	397232	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Copia	397143	397232	20	+	.	.
scaffold1255	subtractBed	intrn	396222	396449	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy-Cigr	396222	396449	144	+	.	.
scaffold1255	subtractBed	intrn	396469	396747	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy-Cigr	396469	396747	86	+	.	.
scaffold1255	subtractBed	intrn	393918	394307	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	393918	394307	58	+	.	.
scaffold1255	subtractBed	intrn	393394	393627	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	393394	393627	59	+	.	.
scaffold1255	subtractBed	intrn	396481	396816	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	396481	396816	33	+	.	.
scaffold1255	subtractBed	intrn	393998	395692	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy-Cigr	393998	395692	904	+	.	.
scaffold1255	subtractBed	intrn	393448	393915	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	393448	393915	94	+	.	.
scaffold1255	subtractBed	intrn	393301	393615	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	393301	393615	35	+	.	.
scaffold1255	subtractBed	intrn	397196	397289	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Copia	397196	397294	24	+	.	.
scaffold1255	subtractBed	intrn	394310	396277	.	+	.	Parent=CGI_10018083;
	scaffold1255	WUBlastX	LTR_Gypsy	394310	396277	1302	+	.	.
scaffold1255	subtractBed	intrn	386159	386164	.	-	.	Parent=CGI_10018085;
	scaffold1255	WUBlastX	DNA_hAT	385091	386164	201	-	.	.
scaffold1255	subtractBed	intrn	386230	386253	.	-	.	Parent=CGI_10018085;
	scaffold1255	WUBlastX	DNA_hAT	386230	386445	74	-	.	.
scaffold1255	subtractBed	intrn	386436	386445	.	-	.	Parent=CGI_10018085;
	scaffold1255	WUBlastX	DNA_hAT	386230	386445	74	-	.	.
scaffold1255	subtractBed	intrn	487165	487213	.	+	.	Parent=CGI_10018087;
	scaffold1255	TRF	Tandem_Repeat	487165	487213	98	+	.	.
scaffold1255	subtractBed	intrn	491627	491831	.	+	.	Parent=CGI_10018087;
	scaffold1255	TRF	Tandem_Repeat	491627	491831	132	+	.	.
scaffold1255	subtractBed	intrn	522745	523984	.	-	.	Parent=CGI_10018091;
	scaffold1255	TRF	Tandem_Repeat	522745	523984	1445	+	.	.
scaffold1256	subtractBed	intrn	7492	7864	.	+	.	Parent=CGI_10005420;
	scaffold1256	TRF	Tandem_Repeat	7492	7864	278	+	.	.
scaffold1256	subtractBed	intrn	7492	7864	.	+	.	Parent=CGI_10005420;
	scaffold1256	TRF	Tandem_Repeat	7492	7864	307	+	.	.
scaffold1256	subtractBed	intrn	72237	72286	.	-	.	Parent=CGI_10005426;
	scaffold1256	TRF	Tandem_Repeat	72237	72286	84	+	.	.
scaffold1256	subtractBed	intrn	78656	79456	.	+	.	Parent=CGI_10005427;
	scaffold1256	WUBlastX	LTR_Gypsy	78656	79456	245	+	.	.
scaffold1256	subtractBed	intrn	93414	93573	.	+	.	Parent=CGI_10005430;
	scaffold1256	TRF	Tandem_Repeat	93414	93573	148	+	.	.
scaffold1256	subtractBed	intrn	94284	94578	.	+	.	Parent=CGI_10005430;
	scaffold1256	TRF	Tandem_Repeat	94284	94578	274	+	.	.
scaffold1256	subtractBed	intrn	90546	90797	.	+	.	Parent=CGI_10005430;
	scaffold1256	WUBlastX	LTR_Ngaro	90546	90797	68	+	.	.
scaffold1256	subtractBed	intrn	91579	91641	.	+	.	Parent=CGI_10005430;
	scaffold1256	WUBlastX	LTR_Ngaro	91579	91641	26	+	.	.
scaffold1256	subtractBed	intrn	90481	90830	.	+	.	Parent=CGI_10005430;
	scaffold1256	WUBlastX	LTR_Ngaro	90459	90830	43	+	.	.
scaffold1256	subtractBed	intrn	91626	91703	.	+	.	Parent=CGI_10005430;
	scaffold1256	WUBlastX	LTR_Ngaro	91626	91703	31	+	.	.
scaffold1256	subtractBed	intrn	112376	112409	.	+	.	Parent=CGI_10005431;
	scaffold1256	TRF	Tandem_Repeat	112376	112409	68	+	.	.
scaffold1256	subtractBed	intrn	112583	112635	.	+	.	Parent=CGI_10005431;
	scaffold1256	TRF	Tandem_Repeat	112583	112635	79	+	.	.
scaffold1258	subtractBed	intrn	9572	9612	.	+	.	Parent=CGI_10023480;
	scaffold1258	TRF	Tandem_Repeat	9572	9612	82	+	.	.
scaffold1258	subtractBed	intrn	12829	12866	.	+	.	Parent=CGI_10023480;
	scaffold1258	TRF	Tandem_Repeat	12829	12866	76	+	.	.
scaffold1258	subtractBed	intrn	76899	76926	.	-	.	Parent=CGI_10023484;
	scaffold1258	TRF	Tandem_Repeat	76899	76926	56	+	.	.
scaffold1258	subtractBed	intrn	81775	81998	.	-	.	Parent=CGI_10023484;
	scaffold1258	TRF	Tandem_Repeat	81775	81998	182	+	.	.
scaffold1258	subtractBed	intrn	86856	87334	.	-	.	Parent=CGI_10023484;
	scaffold1258	TRF	Tandem_Repeat	86856	87334	374	+	.	.
scaffold1258	subtractBed	intrn	87108	87466	.	-	.	Parent=CGI_10023484;
	scaffold1258	TRF	Tandem_Repeat	87108	87466	384	+	.	.
scaffold1258	subtractBed	intrn	122456	122819	.	-	.	Parent=CGI_10023486;
	scaffold1258	TRF	Tandem_Repeat	122456	122819	283	+	.	.
scaffold1258	subtractBed	intrn	122476	122807	.	-	.	Parent=CGI_10023486;
	scaffold1258	TRF	Tandem_Repeat	122476	122807	213	+	.	.
scaffold1258	subtractBed	intrn	123704	123869	.	-	.	Parent=CGI_10023486;
	scaffold1258	TRF	Tandem_Repeat	123704	123869	207	+	.	.
scaffold1258	subtractBed	intrn	129496	129548	.	-	.	Parent=CGI_10023486;
	scaffold1258	TRF	Tandem_Repeat	129496	129548	106	+	.	.
scaffold1258	subtractBed	intrn	130419	130505	.	-	.	Parent=CGI_10023486;
	scaffold1258	TRF	Tandem_Repeat	130419	130505	84	+	.	.
scaffold1258	subtractBed	intrn	134792	134841	.	-	.	Parent=CGI_10023487;
	scaffold1258	TRF	Tandem_Repeat	134792	134841	100	+	.	.
scaffold1258	subtractBed	intrn	136368	136595	.	-	.	Parent=CGI_10023487;
	scaffold1258	TRF	Tandem_Repeat	136368	136595	375	+	.	.
scaffold1258	subtractBed	intrn	230322	230400	.	+	.	Parent=CGI_10023492;
	scaffold1258	TRF	Tandem_Repeat	230322	230400	63	+	.	.
scaffold1258	subtractBed	intrn	230422	230508	.	+	.	Parent=CGI_10023492;
	scaffold1258	TRF	Tandem_Repeat	230422	230508	59	+	.	.
scaffold1258	subtractBed	intrn	230570	230646	.	+	.	Parent=CGI_10023492;
	scaffold1258	TRF	Tandem_Repeat	230570	230646	57	+	.	.
scaffold1258	subtractBed	intrn	235534	235564	.	+	.	Parent=CGI_10023492;
	scaffold1258	TRF	Tandem_Repeat	235534	235564	53	+	.	.
scaffold1258	subtractBed	intrn	237409	237587	.	+	.	Parent=CGI_10023492;
	scaffold1258	TRF	Tandem_Repeat	237409	237587	224	+	.	.
scaffold1258	subtractBed	intrn	252501	252991	.	+	.	Parent=CGI_10023493;
	scaffold1258	TRF	Tandem_Repeat	252501	252991	662	+	.	.
scaffold1258	subtractBed	intrn	253026	253406	.	+	.	Parent=CGI_10023493;
	scaffold1258	TRF	Tandem_Repeat	253026	253406	470	+	.	.
scaffold1258	subtractBed	intrn	253026	253406	.	+	.	Parent=CGI_10023493;
	scaffold1258	TRF	Tandem_Repeat	253026	253406	473	+	.	.
scaffold1258	subtractBed	intrn	257717	257830	.	+	.	Parent=CGI_10023493;
	scaffold1258	TRF	Tandem_Repeat	257717	257830	129	+	.	.
scaffold1258	subtractBed	intrn	266715	266971	.	+	.	Parent=CGI_10023493;
	scaffold1258	TRF	Tandem_Repeat	266715	266971	205	+	.	.
scaffold1258	subtractBed	intrn	280730	282733	.	+	.	Parent=CGI_10023494;
	scaffold1258	TRF	Tandem_Repeat	280730	282733	3112	+	.	.
scaffold1258	subtractBed	intrn	307922	307959	.	+	.	Parent=CGI_10023496;
	scaffold1258	TRF	Tandem_Repeat	307922	307959	58	+	.	.
scaffold1258	subtractBed	intrn	383533	383571	.	-	.	Parent=CGI_10023497;
	scaffold1258	TRF	Tandem_Repeat	383533	383571	51	+	.	.
scaffold1258	subtractBed	intrn	383535	383569	.	-	.	Parent=CGI_10023497;
	scaffold1258	TRF	Tandem_Repeat	383535	383569	52	+	.	.
scaffold1258	subtractBed	intrn	487723	487774	.	+	.	Parent=CGI_10023500;
	scaffold1258	TRF	Tandem_Repeat	487723	487774	104	+	.	.
scaffold1258	subtractBed	intrn	541185	541222	.	-	.	Parent=CGI_10023505;
	scaffold1258	TRF	Tandem_Repeat	541185	541222	76	+	.	.
scaffold1258	subtractBed	intrn	541221	541245	.	-	.	Parent=CGI_10023505;
	scaffold1258	TRF	Tandem_Repeat	541221	541245	50	+	.	.
scaffold1258	subtractBed	intrn	541962	541994	.	-	.	Parent=CGI_10023505;
	scaffold1258	TRF	Tandem_Repeat	541962	541994	66	+	.	.
scaffold1258	subtractBed	intrn	650399	650547	.	-	.	Parent=CGI_10023509;
	scaffold1258	TRF	Tandem_Repeat	650399	650547	57	+	.	.
scaffold1258	subtractBed	intrn	651505	652249	.	-	.	Parent=CGI_10023509;
	scaffold1258	TRF	Tandem_Repeat	651505	652249	953	+	.	.
scaffold1258	subtractBed	intrn	651499	652341	.	-	.	Parent=CGI_10023509;
	scaffold1258	TRF	Tandem_Repeat	651499	652341	708	+	.	.
scaffold1258	subtractBed	intrn	658385	658492	.	-	.	Parent=CGI_10023509;
	scaffold1258	TRF	Tandem_Repeat	658385	658492	189	+	.	.
scaffold1258	subtractBed	intrn	722691	722991	.	+	.	Parent=CGI_10023510;
	scaffold1258	TRF	Tandem_Repeat	722691	722991	458	+	.	.
scaffold1258	subtractBed	intrn	738066	738113	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	738066	738113	96	+	.	.
scaffold1258	subtractBed	intrn	742328	742375	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	742328	742375	96	+	.	.
scaffold1258	subtractBed	intrn	746800	746853	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	746800	746853	90	+	.	.
scaffold1258	subtractBed	intrn	747198	747270	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	747198	747270	101	+	.	.
scaffold1258	subtractBed	intrn	748175	748422	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	748175	748422	212	+	.	.
scaffold1258	subtractBed	intrn	748186	748395	.	-	.	Parent=CGI_10023511;
	scaffold1258	TRF	Tandem_Repeat	748186	748395	258	+	.	.
scaffold1258	subtractBed	intrn	781638	781738	.	-	.	Parent=CGI_10023512;
	scaffold1258	TRF	Tandem_Repeat	781638	781738	139	+	.	.
scaffold1258	subtractBed	intrn	787688	787715	.	-	.	Parent=CGI_10023512;
	scaffold1258	TRF	Tandem_Repeat	787688	787715	56	+	.	.
scaffold1258	subtractBed	intrn	791217	791407	.	-	.	Parent=CGI_10023513;
	scaffold1258	TRF	Tandem_Repeat	791217	791407	165	+	.	.
scaffold1258	subtractBed	intrn	818230	818274	.	-	.	Parent=CGI_10023513;
	scaffold1258	TRF	Tandem_Repeat	818230	818274	90	+	.	.
scaffold1259	subtractBed	intrn	10045	10205	.	-	.	Parent=CGI_10005496;
	scaffold1259	TRF	Tandem_Repeat	10045	10205	159	+	.	.
scaffold1259	subtractBed	intrn	12781	13083	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_CR1-L2	12781	13083	130	+	.	.
scaffold1259	subtractBed	intrn	15516	15707	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	15516	15707	44	-	.	.
scaffold1259	subtractBed	intrn	15722	16036	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	15722	16036	39	-	.	.
scaffold1259	subtractBed	intrn	12676	13083	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L2	12676	13083	125	+	.	.
scaffold1259	subtractBed	intrn	13109	13300	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L1	13109	13300	77	+	.	.
scaffold1259	subtractBed	intrn	15516	15635	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA	15516	15635	50	-	.	.
scaffold1259	subtractBed	intrn	15474	15635	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	15474	15635	42	-	.	.
scaffold1259	subtractBed	intrn	15833	16078	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	15833	16078	55	-	.	.
scaffold1259	subtractBed	intrn	12574	13065	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L2	12574	13065	91	+	.	.
scaffold1259	subtractBed	intrn	13010	13333	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L2	13010	13333	46	+	.	.
scaffold1259	subtractBed	intrn	14808	15254	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	14808	15254	62	-	.	.
scaffold1259	subtractBed	intrn	15821	16027	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	15821	16027	60	-	.	.
scaffold1259	subtractBed	intrn	16589	16795	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	DNA_MuDR	16589	16795	22	-	.	.
scaffold1259	subtractBed	intrn	19306	19518	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L1	19306	19518	133	-	.	.
scaffold1259	subtractBed	intrn	18096	18102	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_CR1	17932	18102	40	-	.	.
scaffold1259	subtractBed	intrn	19306	19485	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L1-Tx1	19306	19485	147	-	.	.
scaffold1259	subtractBed	intrn	19306	19641	.	-	.	Parent=CGI_10005496;
	scaffold1259	WUBlastX	LINE_L1	19306	19641	100	-	.	.
scaffold1259	subtractBed	intrn	28592	28688	.	-	.	Parent=CGI_10005497;
	scaffold1259	TRF	Tandem_Repeat	28592	28688	94	+	.	.
scaffold1259	subtractBed	intrn	60350	60380	.	+	.	Parent=CGI_10005498;
	scaffold1259	TRF	Tandem_Repeat	60350	60380	53	+	.	.
scaffold1259	subtractBed	intrn	60447	60475	.	+	.	Parent=CGI_10005498;
	scaffold1259	TRF	Tandem_Repeat	60447	60475	58	+	.	.
scaffold126	subtractBed	intrn	73006	73065	.	+	.	Parent=CGI_10019179;
	scaffold126	TRF	Tandem_Repeat	73006	73065	104	+	.	.
scaffold126	subtractBed	intrn	72200	72202	.	+	.	Parent=CGI_10019179;
	scaffold126	WUBlastX	DNA_Harbinger	71990	72202	69	+	.	.
scaffold126	subtractBed	intrn	191700	191816	.	+	.	Parent=CGI_10019182;
	scaffold126	TRF	Tandem_Repeat	191700	191816	74	+	.	.
scaffold126	subtractBed	intrn	195530	195590	.	+	.	Parent=CGI_10019182;
	scaffold126	TRF	Tandem_Repeat	195530	195590	58	+	.	.
scaffold126	subtractBed	intrn	191700	191816	.	-	.	Parent=CGI_10019184;
	scaffold126	TRF	Tandem_Repeat	191700	191816	74	+	.	.
scaffold126	subtractBed	intrn	195530	195590	.	-	.	Parent=CGI_10019184;
	scaffold126	TRF	Tandem_Repeat	195530	195590	58	+	.	.
scaffold126	subtractBed	intrn	216701	217495	.	+	.	Parent=CGI_10019186;
	scaffold126	TRF	Tandem_Repeat	216701	217495	261	+	.	.
scaffold126	subtractBed	intrn	216884	217535	.	+	.	Parent=CGI_10019186;
	scaffold126	TRF	Tandem_Repeat	216884	217535	885	+	.	.
scaffold126	subtractBed	intrn	219259	220884	.	+	.	Parent=CGI_10019186;
	scaffold126	WUBlastX	LINE_L2	219259	220884	929	+	.	.
scaffold126	subtractBed	intrn	219076	220056	.	+	.	Parent=CGI_10019186;
	scaffold126	WUBlastX	LINE_Rex-Babar	219076	220056	156	+	.	.
scaffold126	subtractBed	intrn	252766	252809	.	+	.	Parent=CGI_10019188;
	scaffold126	TRF	Tandem_Repeat	252766	252809	70	+	.	.
scaffold126	subtractBed	intrn	251927	252268	.	+	.	Parent=CGI_10019188;
	scaffold126	WUBlastX	DNA_Kolobok-IS4	251927	252268	135	-	.	.
scaffold126	subtractBed	intrn	252500	252625	.	+	.	Parent=CGI_10019188;
	scaffold126	WUBlastX	DNA_IS4EU	252500	252625	29	-	.	.
scaffold126	subtractBed	intrn	253377	253865	.	+	.	Parent=CGI_10019188;
	scaffold126	WUBlastX	DNA_IS4EU	253377	253865	52	-	.	.
scaffold126	subtractBed	intrn	251921	252346	.	+	.	Parent=CGI_10019188;
	scaffold126	WUBlastX	DNA_IS4EU	251921	252346	112	-	.	.
scaffold126	subtractBed	intrn	252491	252592	.	+	.	Parent=CGI_10019188;
	scaffold126	WUBlastX	DNA_IS4EU	252491	252592	33	-	.	.
scaffold126	subtractBed	intrn	271185	271526	.	-	.	Parent=CGI_10019191;
	scaffold126	WUBlastX	LTR_Gypsy	271185	271526	100	+	.	.
scaffold126	subtractBed	intrn	387864	388868	.	+	.	Parent=CGI_10019196;
	scaffold126	WUBlastX	DNA_IS4EU	387864	388868	601	+	.	.
scaffold126	subtractBed	intrn	392984	393050	.	+	.	Parent=CGI_10019196;
	scaffold126	TRF	Tandem_Repeat	392984	393050	89	+	.	.
scaffold126	subtractBed	intrn	398841	398871	.	+	.	Parent=CGI_10019196;
	scaffold126	TRF	Tandem_Repeat	398841	398871	62	+	.	.
scaffold126	subtractBed	intrn	406752	406796	.	+	.	Parent=CGI_10019197;
	scaffold126	TRF	Tandem_Repeat	406752	406796	74	+	.	.
scaffold126	subtractBed	intrn	579046	579267	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579025	579267	86	+	.	.
scaffold126	subtractBed	intrn	579734	580051	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579734	580051	64	+	.	.
scaffold126	subtractBed	intrn	579445	579690	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579445	579690	48	+	.	.
scaffold126	subtractBed	intrn	579743	579997	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579743	579997	79	+	.	.
scaffold126	subtractBed	intrn	579358	579612	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579358	579612	63	+	.	.
scaffold126	subtractBed	intrn	579064	579261	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579064	579261	97	+	.	.
scaffold126	subtractBed	intrn	579436	579603	.	+	.	Parent=CGI_10019200;
	scaffold126	WUBlastX	DNA_MuDR	579436	579603	82	+	.	.
scaffold1260	subtractBed	intrn	101169	101205	.	+	.	Parent=CGI_10005943;
	scaffold1260	TRF	Tandem_Repeat	101169	101205	74	+	.	.
scaffold1260	subtractBed	intrn	101814	101876	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	101529	101876	27	-	.	.
scaffold1260	subtractBed	intrn	101814	102108	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	101737	102108	77	-	.	.
scaffold1260	subtractBed	intrn	101833	102240	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	101833	102240	134	-	.	.
scaffold1260	subtractBed	intrn	101818	102102	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	101818	102102	144	-	.	.
scaffold1260	subtractBed	intrn	102082	102573	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	102082	102618	91	-	.	.
scaffold1260	subtractBed	intrn	103026	103310	.	+	.	Parent=CGI_10005943;
	scaffold1260	WUBlastX	DNA_Academ	103026	103310	62	-	.	.
scaffold1260	subtractBed	intrn	101814	101876	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	101529	101876	27	-	.	.
scaffold1260	subtractBed	intrn	101814	102108	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	101737	102108	77	-	.	.
scaffold1260	subtractBed	intrn	101833	102240	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	101833	102240	134	-	.	.
scaffold1260	subtractBed	intrn	101818	102102	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	101818	102102	144	-	.	.
scaffold1260	subtractBed	intrn	102082	102573	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	102082	102618	91	-	.	.
scaffold1260	subtractBed	intrn	103026	103310	.	-	.	Parent=CGI_10005944;
	scaffold1260	WUBlastX	DNA_Academ	103026	103310	62	-	.	.
scaffold1262	subtractBed	intrn	68407	68455	.	-	.	Parent=CGI_10018928;
	scaffold1262	TRF	Tandem_Repeat	68407	68455	71	+	.	.
scaffold1262	subtractBed	intrn	68887	68936	.	-	.	Parent=CGI_10018928;
	scaffold1262	TRF	Tandem_Repeat	68887	68936	66	+	.	.
scaffold1262	subtractBed	intrn	69957	70133	.	-	.	Parent=CGI_10018928;
	scaffold1262	WUBlastX	DNA_Sola	69957	70133	112	+	.	.
scaffold1262	subtractBed	intrn	72242	72283	.	-	.	Parent=CGI_10018928;
	scaffold1262	TRF	Tandem_Repeat	72242	72283	84	+	.	.
scaffold1262	subtractBed	intrn	147643	148801	.	-	.	Parent=CGI_10018933;
	scaffold1262	TRF	Tandem_Repeat	147643	148801	1133	+	.	.
scaffold1262	subtractBed	intrn	147643	148801	.	+	.	Parent=CGI_10018934;
	scaffold1262	TRF	Tandem_Repeat	147643	148801	1133	+	.	.
scaffold1262	subtractBed	intrn	241341	241365	.	+	.	Parent=CGI_10018941;
	scaffold1262	TRF	Tandem_Repeat	241341	241365	50	+	.	.
scaffold1262	subtractBed	intrn	262621	262691	.	-	.	Parent=CGI_10018942;
	scaffold1262	TRF	Tandem_Repeat	262621	262691	142	+	.	.
scaffold1262	subtractBed	intrn	263215	263245	.	-	.	Parent=CGI_10018942;
	scaffold1262	TRF	Tandem_Repeat	263215	263245	62	+	.	.
scaffold1262	subtractBed	intrn	274029	274076	.	-	.	Parent=CGI_10018942;
	scaffold1262	TRF	Tandem_Repeat	274029	274076	60	+	.	.
scaffold1262	subtractBed	intrn	302610	302639	.	-	.	Parent=CGI_10018943;
	scaffold1262	TRF	Tandem_Repeat	302610	302639	51	+	.	.
scaffold1262	subtractBed	intrn	303222	303265	.	-	.	Parent=CGI_10018943;
	scaffold1262	TRF	Tandem_Repeat	303222	303265	88	+	.	.
scaffold1262	subtractBed	intrn	307221	307280	.	-	.	Parent=CGI_10018943;
	scaffold1262	TRF	Tandem_Repeat	307221	307280	104	+	.	.
scaffold1262	subtractBed	intrn	360733	360781	.	-	.	Parent=CGI_10018945;
	scaffold1262	TRF	Tandem_Repeat	360733	360781	98	+	.	.
scaffold1262	subtractBed	intrn	366838	366870	.	-	.	Parent=CGI_10018945;
	scaffold1262	TRF	Tandem_Repeat	366838	366870	66	+	.	.
scaffold1262	subtractBed	intrn	366838	366870	.	+	.	Parent=CGI_10018946;
	scaffold1262	TRF	Tandem_Repeat	366838	366870	66	+	.	.
scaffold1262	subtractBed	intrn	378165	378323	.	-	.	Parent=CGI_10018947;
	scaffold1262	WUBlastX	LTR_Gypsy	378165	378323	75	+	.	.
scaffold1262	subtractBed	intrn	382780	382995	.	-	.	Parent=CGI_10018947;
	scaffold1262	TRF	Tandem_Repeat	382780	382995	360	+	.	.
scaffold1262	subtractBed	intrn	392075	392368	.	+	.	Parent=CGI_10018948;
	scaffold1262	TRF	Tandem_Repeat	392073	392368	385	+	.	.
scaffold1262	subtractBed	intrn	392075	392368	.	+	.	Parent=CGI_10018948;
	scaffold1262	TRF	Tandem_Repeat	392073	392368	538	+	.	.
scaffold1262	subtractBed	intrn	407827	407921	.	-	.	Parent=CGI_10018950;
	scaffold1262	TRF	Tandem_Repeat	407827	407921	63	+	.	.
scaffold1262	subtractBed	intrn	407828	407921	.	-	.	Parent=CGI_10018950;
	scaffold1262	TRF	Tandem_Repeat	407828	407921	82	+	.	.
scaffold1262	subtractBed	intrn	407870	407909	.	-	.	Parent=CGI_10018950;
	scaffold1262	TRF	Tandem_Repeat	407870	407909	59	+	.	.
scaffold1262	subtractBed	intrn	426512	426577	.	+	.	Parent=CGI_10018952;
	scaffold1262	TRF	Tandem_Repeat	426512	426577	77	+	.	.
scaffold1262	subtractBed	intrn	426512	426597	.	+	.	Parent=CGI_10018952;
	scaffold1262	TRF	Tandem_Repeat	426512	426597	61	+	.	.
scaffold1262	subtractBed	intrn	468937	468986	.	+	.	Parent=CGI_10018954;
	scaffold1262	TRF	Tandem_Repeat	468937	468986	100	+	.	.
scaffold1262	subtractBed	intrn	513637	514635	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_IS4EU	513637	514635	541	-	.	.
scaffold1262	subtractBed	intrn	511675	511815	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_IS4EU	511675	511815	29	+	.	.
scaffold1262	subtractBed	intrn	512042	512293	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_IS4EU	512042	512293	45	+	.	.
scaffold1262	subtractBed	intrn	511476	511676	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_Kolobok-IS4	511476	511676	64	+	.	.
scaffold1262	subtractBed	intrn	512090	513232	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_Kolobok-IS4	512090	513232	275	+	.	.
scaffold1262	subtractBed	intrn	511314	511739	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_IS4EU	511314	511739	52	+	.	.
scaffold1262	subtractBed	intrn	515211	515281	.	-	.	Parent=CGI_10018956;
	scaffold1262	TRF	Tandem_Repeat	515211	515281	124	+	.	.
scaffold1262	subtractBed	intrn	515396	515430	.	-	.	Parent=CGI_10018956;
	scaffold1262	TRF	Tandem_Repeat	515396	515430	70	+	.	.
scaffold1262	subtractBed	intrn	515544	515578	.	-	.	Parent=CGI_10018956;
	scaffold1262	TRF	Tandem_Repeat	515544	515578	70	+	.	.
scaffold1262	subtractBed	intrn	515692	515726	.	-	.	Parent=CGI_10018956;
	scaffold1262	TRF	Tandem_Repeat	515692	515726	70	+	.	.
scaffold1262	subtractBed	intrn	515172	515174	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_Kolobok-IS4	515085	515174	39	-	.	.
scaffold1262	subtractBed	intrn	515844	515981	.	-	.	Parent=CGI_10018956;
	scaffold1262	WUBlastX	DNA_Kolobok-IS4	515844	515981	40	-	.	.
scaffold1262	subtractBed	intrn	534285	534310	.	-	.	Parent=CGI_10018958;
	scaffold1262	TRF	Tandem_Repeat	534285	534310	52	+	.	.
scaffold1262	subtractBed	intrn	539198	539263	.	+	.	Parent=CGI_10018959;
	scaffold1262	TRF	Tandem_Repeat	539198	539263	89	+	.	.
scaffold1262	subtractBed	intrn	539110	539110	.	+	.	Parent=CGI_10018959;
	scaffold1262	WUBlastX	LTR_Gypsy	538928	539110	50	+	.	.
scaffold1264	subtractBed	intrn	37249	37773	.	+	.	Parent=CGI_10007170;
	scaffold1264	WUBlastX	LINE_L1	37249	37773	38	+	.	.
scaffold1264	subtractBed	intrn	37129	37626	.	+	.	Parent=CGI_10007170;
	scaffold1264	WUBlastX	LINE_L1-Tx1	37129	37626	42	+	.	.
scaffold1264	subtractBed	intrn	53155	53194	.	+	.	Parent=CGI_10007171;
	scaffold1264	TRF	Tandem_Repeat	53155	53194	53	+	.	.
scaffold1264	subtractBed	intrn	84433	84481	.	-	.	Parent=CGI_10007172;
	scaffold1264	TRF	Tandem_Repeat	84433	84481	98	+	.	.
scaffold1264	subtractBed	intrn	91754	91806	.	-	.	Parent=CGI_10007172;
	scaffold1264	TRF	Tandem_Repeat	91754	91806	106	+	.	.
scaffold1264	subtractBed	intrn	110069	110129	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	110069	110129	50	+	.	.
scaffold1264	subtractBed	intrn	110201	110264	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	110201	110264	58	+	.	.
scaffold1264	subtractBed	intrn	110201	110287	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	110201	110287	77	+	.	.
scaffold1264	subtractBed	intrn	111838	111872	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	111838	111872	70	+	.	.
scaffold1264	subtractBed	intrn	112060	112132	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	112060	112132	137	+	.	.
scaffold1264	subtractBed	intrn	112858	112946	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	112858	112946	81	+	.	.
scaffold1264	subtractBed	intrn	113019	113079	.	+	.	Parent=CGI_10007173;
	scaffold1264	TRF	Tandem_Repeat	113019	113079	50	+	.	.
scaffold1264	subtractBed	intrn	110069	110129	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	110069	110129	50	+	.	.
scaffold1264	subtractBed	intrn	110201	110264	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	110201	110264	58	+	.	.
scaffold1264	subtractBed	intrn	110201	110287	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	110201	110287	77	+	.	.
scaffold1264	subtractBed	intrn	111838	111872	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	111838	111872	70	+	.	.
scaffold1264	subtractBed	intrn	112060	112132	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	112060	112132	137	+	.	.
scaffold1264	subtractBed	intrn	112858	112946	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	112858	112946	81	+	.	.
scaffold1264	subtractBed	intrn	113019	113079	.	-	.	Parent=CGI_10007174;
	scaffold1264	TRF	Tandem_Repeat	113019	113079	50	+	.	.
scaffold1264	subtractBed	intrn	137531	139060	.	-	.	Parent=CGI_10007176;
	scaffold1264	WUBlastX	LINE_L1-Tx1	137531	139060	328	+	.	.
scaffold1264	subtractBed	intrn	136179	137522	.	-	.	Parent=CGI_10007176;
	scaffold1264	WUBlastX	LINE_L1	136179	137522	839	+	.	.
scaffold1264	subtractBed	intrn	135433	136242	.	-	.	Parent=CGI_10007176;
	scaffold1264	WUBlastX	LINE_L1	135433	136242	326	+	.	.
scaffold1264	subtractBed	intrn	140064	140116	.	-	.	Parent=CGI_10007176;
	scaffold1264	TRF	Tandem_Repeat	140064	140116	97	+	.	.
scaffold1264	subtractBed	intrn	147879	147939	.	-	.	Parent=CGI_10007176;
	scaffold1264	TRF	Tandem_Repeat	147879	147939	122	+	.	.
scaffold1264	subtractBed	intrn	149477	149534	.	-	.	Parent=CGI_10007176;
	scaffold1264	TRF	Tandem_Repeat	149477	149534	107	+	.	.
scaffold1264	subtractBed	intrn	147879	147939	.	+	.	Parent=CGI_10007177;
	scaffold1264	TRF	Tandem_Repeat	147879	147939	122	+	.	.
scaffold1264	subtractBed	intrn	149477	149534	.	+	.	Parent=CGI_10007177;
	scaffold1264	TRF	Tandem_Repeat	149477	149534	107	+	.	.
scaffold1266	subtractBed	intrn	31428	31463	.	-	.	Parent=CGI_10004344;
	scaffold1266	TRF	Tandem_Repeat	31428	31463	72	+	.	.
scaffold1267	subtractBed	intrn	29647	31034	.	+	.	Parent=CGI_10025137;
	scaffold1267	TRF	Tandem_Repeat	29647	31034	1493	+	.	.
scaffold1267	subtractBed	intrn	51589	51658	.	-	.	Parent=CGI_10025138;
	scaffold1267	TRF	Tandem_Repeat	51589	51658	54	+	.	.
scaffold1267	subtractBed	intrn	51589	51657	.	-	.	Parent=CGI_10025138;
	scaffold1267	TRF	Tandem_Repeat	51589	51657	75	+	.	.
scaffold1267	subtractBed	intrn	79721	79787	.	+	.	Parent=CGI_10025139;
	scaffold1267	TRF	Tandem_Repeat	79721	79787	134	+	.	.
scaffold1267	subtractBed	intrn	81005	81166	.	+	.	Parent=CGI_10025139;
	scaffold1267	TRF	Tandem_Repeat	81005	81166	188	+	.	.
scaffold1267	subtractBed	intrn	109436	109462	.	+	.	Parent=CGI_10025141;
	scaffold1267	TRF	Tandem_Repeat	109436	109462	54	+	.	.
scaffold1267	subtractBed	intrn	165335	165384	.	+	.	Parent=CGI_10025144;
	scaffold1267	TRF	Tandem_Repeat	165335	165384	100	+	.	.
scaffold1267	subtractBed	intrn	414602	414639	.	+	.	Parent=CGI_10025153;
	scaffold1267	TRF	Tandem_Repeat	414602	414639	76	+	.	.
scaffold1267	subtractBed	intrn	522149	522174	.	-	.	Parent=CGI_10025154;
	scaffold1267	TRF	Tandem_Repeat	522149	522174	52	+	.	.
scaffold1267	subtractBed	intrn	522402	522493	.	-	.	Parent=CGI_10025154;
	scaffold1267	TRF	Tandem_Repeat	522402	522493	123	+	.	.
scaffold1267	subtractBed	intrn	530700	530813	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	530700	530813	74	+	.	.
scaffold1267	subtractBed	intrn	530720	530834	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	530720	530834	76	+	.	.
scaffold1267	subtractBed	intrn	532361	532633	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	532361	532633	357	+	.	.
scaffold1267	subtractBed	intrn	538542	538618	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538542	538618	58	+	.	.
scaffold1267	subtractBed	intrn	538614	538663	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538614	538663	54	+	.	.
scaffold1267	subtractBed	intrn	538685	538856	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538685	538856	66	+	.	.
scaffold1267	subtractBed	intrn	538838	538935	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538838	538935	81	+	.	.
scaffold1267	subtractBed	intrn	538806	538933	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538806	538933	183	+	.	.
scaffold1267	subtractBed	intrn	538802	538936	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	538802	538936	70	+	.	.
scaffold1267	subtractBed	intrn	543181	543490	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	543181	543490	575	+	.	.
scaffold1267	subtractBed	intrn	544725	545403	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	544725	545403	1061	+	.	.
scaffold1267	subtractBed	intrn	545680	545867	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	545680	545867	367	+	.	.
scaffold1267	subtractBed	intrn	545685	545859	.	-	.	Parent=CGI_10025156;
	scaffold1267	TRF	Tandem_Repeat	545685	545859	53	+	.	.
scaffold1267	subtractBed	intrn	548461	548510	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	548461	548510	100	+	.	.
scaffold1267	subtractBed	intrn	552032	553387	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	552032	553387	1796	+	.	.
scaffold1267	subtractBed	intrn	552032	553387	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	552032	553387	2117	+	.	.
scaffold1267	subtractBed	intrn	552032	553387	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	552032	553387	2118	+	.	.
scaffold1267	subtractBed	intrn	552732	553377	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	552732	553377	880	+	.	.
scaffold1267	subtractBed	intrn	559378	559613	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	559378	559613	141	+	.	.
scaffold1267	subtractBed	intrn	559376	559614	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	559376	559614	205	+	.	.
scaffold1267	subtractBed	intrn	559726	559863	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	559726	559863	154	+	.	.
scaffold1267	subtractBed	intrn	559779	559884	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	559779	559884	129	+	.	.
scaffold1267	subtractBed	intrn	560175	560741	.	+	.	Parent=CGI_10025157;
	scaffold1267	TRF	Tandem_Repeat	560175	560741	819	+	.	.
scaffold1267	subtractBed	intrn	594887	595034	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	594887	595034	82	+	.	.
scaffold1267	subtractBed	intrn	595172	595292	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	595172	595292	95	+	.	.
scaffold1267	subtractBed	intrn	595234	595582	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	595234	595582	511	+	.	.
scaffold1267	subtractBed	intrn	595367	595584	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	595367	595584	99	+	.	.
scaffold1267	subtractBed	intrn	596391	596964	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	596391	596964	755	+	.	.
scaffold1267	subtractBed	intrn	596430	596964	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	596430	596964	878	+	.	.
scaffold1267	subtractBed	intrn	596802	596936	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	596802	596936	74	+	.	.
scaffold1267	subtractBed	intrn	599849	599921	.	+	.	Parent=CGI_10025160;
	scaffold1267	TRF	Tandem_Repeat	599849	599921	146	+	.	.
scaffold1267	subtractBed	intrn	630539	630618	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	630539	630618	114	+	.	.
scaffold1267	subtractBed	intrn	630538	630623	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	630538	630623	108	+	.	.
scaffold1267	subtractBed	intrn	630535	630624	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	630535	630624	80	+	.	.
scaffold1267	subtractBed	intrn	632174	632775	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	632174	632775	723	+	.	.
scaffold1267	subtractBed	intrn	635598	635629	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	635598	635629	50	+	.	.
scaffold1267	subtractBed	intrn	636315	636974	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	636315	636974	947	+	.	.
scaffold1267	subtractBed	intrn	638576	639002	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	638576	639002	597	+	.	.
scaffold1267	subtractBed	intrn	641851	642029	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	641851	642029	243	+	.	.
scaffold1267	subtractBed	intrn	645010	645064	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	645010	645064	62	+	.	.
scaffold1267	subtractBed	intrn	645915	646192	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	645915	646192	259	+	.	.
scaffold1267	subtractBed	intrn	645979	646232	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	645979	646232	234	+	.	.
scaffold1267	subtractBed	intrn	646186	646509	.	+	.	Parent=CGI_10025163;
	scaffold1267	TRF	Tandem_Repeat	646186	646509	212	+	.	.
scaffold1267	subtractBed	intrn	674299	674366	.	+	.	Parent=CGI_10025164;
	scaffold1267	TRF	Tandem_Repeat	674299	674366	136	+	.	.
scaffold1267	subtractBed	intrn	691378	691429	.	+	.	Parent=CGI_10025165;
	scaffold1267	TRF	Tandem_Repeat	691378	691429	104	+	.	.
scaffold1267	subtractBed	intrn	698875	699318	.	+	.	Parent=CGI_10025165;
	scaffold1267	TRF	Tandem_Repeat	698875	699318	715	+	.	.
scaffold1267	subtractBed	intrn	698875	699318	.	+	.	Parent=CGI_10025165;
	scaffold1267	TRF	Tandem_Repeat	698875	699318	703	+	.	.
scaffold1267	subtractBed	intrn	701980	702541	.	+	.	Parent=CGI_10025165;
	scaffold1267	TRF	Tandem_Repeat	701980	702541	822	+	.	.
scaffold1267	subtractBed	intrn	702712	703268	.	+	.	Parent=CGI_10025165;
	scaffold1267	TRF	Tandem_Repeat	702712	703268	690	+	.	.
scaffold1267	subtractBed	intrn	712860	713414	.	-	.	Parent=CGI_10025166;
	scaffold1267	TRF	Tandem_Repeat	712860	713414	433	+	.	.
scaffold1267	subtractBed	intrn	741734	742749	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	741734	743792	2114	+	.	.
scaffold1267	subtractBed	intrn	742857	743792	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	741734	743792	2114	+	.	.
scaffold1267	subtractBed	intrn	743987	744201	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	743987	744201	188	+	.	.
scaffold1267	subtractBed	intrn	745630	745831	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	745630	745831	167	+	.	.
scaffold1267	subtractBed	intrn	745953	746913	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	745925	746913	1591	+	.	.
scaffold1267	subtractBed	intrn	747763	750470	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	747763	750470	3324	+	.	.
scaffold1267	subtractBed	intrn	747772	750470	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	747772	750470	4519	+	.	.
scaffold1267	subtractBed	intrn	750307	750560	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	750307	750560	91	+	.	.
scaffold1267	subtractBed	intrn	756991	757169	.	-	.	Parent=CGI_10025169;
	scaffold1267	TRF	Tandem_Repeat	756991	757169	109	+	.	.
scaffold1267	subtractBed	intrn	768870	768916	.	+	.	Parent=CGI_10025170;
	scaffold1267	TRF	Tandem_Repeat	768870	768916	58	+	.	.
scaffold1267	subtractBed	intrn	843170	843520	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	843170	843520	403	+	.	.
scaffold1267	subtractBed	intrn	843170	843512	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	843170	843512	402	+	.	.
scaffold1267	subtractBed	intrn	843170	843520	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	843170	843520	578	+	.	.
scaffold1267	subtractBed	intrn	845694	845728	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	845694	845728	70	+	.	.
scaffold1267	subtractBed	intrn	846764	846866	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	846764	846866	179	+	.	.
scaffold1267	subtractBed	intrn	847937	847983	.	+	.	Parent=CGI_10025173;
	scaffold1267	TRF	Tandem_Repeat	847937	847983	58	+	.	.
scaffold1267	subtractBed	intrn	864862	865194	.	-	.	Parent=CGI_10025174;
	scaffold1267	TRF	Tandem_Repeat	864862	865194	468	+	.	.
scaffold1267	subtractBed	intrn	866693	866732	.	-	.	Parent=CGI_10025174;
	scaffold1267	TRF	Tandem_Repeat	866693	866732	53	+	.	.
scaffold1267	subtractBed	intrn	866696	866732	.	-	.	Parent=CGI_10025174;
	scaffold1267	TRF	Tandem_Repeat	866696	866732	65	+	.	.
scaffold1267	subtractBed	intrn	867818	868102	.	-	.	Parent=CGI_10025174;
	scaffold1267	TRF	Tandem_Repeat	867818	868102	347	+	.	.
scaffold1267	subtractBed	intrn	869209	869424	.	-	.	Parent=CGI_10025174;
	scaffold1267	TRF	Tandem_Repeat	869209	869424	312	+	.	.
scaffold1267	subtractBed	intrn	873129	873485	.	-	.	Parent=CGI_10025174;
	scaffold1267	WUBlastX	DNA_TcMar-Tc2	873129	873485	101	-	.	.
scaffold1267	subtractBed	intrn	925195	925246	.	-	.	Parent=CGI_10025176;
	scaffold1267	TRF	Tandem_Repeat	925195	925246	104	+	.	.
scaffold1267	subtractBed	intrn	932009	932036	.	-	.	Parent=CGI_10025176;
	scaffold1267	TRF	Tandem_Repeat	932009	932036	56	+	.	.
scaffold1267	subtractBed	intrn	980206	980271	.	+	.	Parent=CGI_10025178;
	scaffold1267	TRF	Tandem_Repeat	980206	980271	132	+	.	.
scaffold1267	subtractBed	intrn	1029916	1029977	.	-	.	Parent=CGI_10025180;
	scaffold1267	TRF	Tandem_Repeat	1029916	1029977	90	+	.	.
scaffold1267	subtractBed	intrn	1045611	1046996	.	+	.	Parent=CGI_10025181;
	scaffold1267	TRF	Tandem_Repeat	1045611	1046996	1736	+	.	.
scaffold1267	subtractBed	intrn	1047275	1047311	.	+	.	Parent=CGI_10025181;
	scaffold1267	TRF	Tandem_Repeat	1047275	1047311	65	+	.	.
scaffold1267	subtractBed	intrn	1045200	1045442	.	+	.	Parent=CGI_10025181;
	scaffold1267	WUBlastX	LINE_RTE-X	1045200	1045442	124	+	.	.
scaffold1267	subtractBed	intrn	1044356	1044853	.	+	.	Parent=CGI_10025181;
	scaffold1267	WUBlastX	LINE_RTE-X	1044356	1044853	183	+	.	.
scaffold1267	subtractBed	intrn	1045200	1045529	.	+	.	Parent=CGI_10025181;
	scaffold1267	WUBlastX	LINE_RTE-X	1045200	1045529	71	+	.	.
scaffold1267	subtractBed	intrn	1044637	1045167	.	+	.	Parent=CGI_10025181;
	scaffold1267	WUBlastX	LINE_RTE-X	1044637	1045167	102	+	.	.
scaffold127	subtractBed	intrn	37442	37502	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	37442	37502	50	+	.	.
scaffold127	subtractBed	intrn	37574	37637	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	37574	37637	58	+	.	.
scaffold127	subtractBed	intrn	37574	37660	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	37574	37660	77	+	.	.
scaffold127	subtractBed	intrn	38148	38186	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	38148	38186	78	+	.	.
scaffold127	subtractBed	intrn	39211	39251	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	39211	39251	82	+	.	.
scaffold127	subtractBed	intrn	39440	39480	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	39440	39480	73	+	.	.
scaffold127	subtractBed	intrn	40200	40286	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	40200	40286	86	+	.	.
scaffold127	subtractBed	intrn	40359	40419	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	40359	40419	50	+	.	.
scaffold127	subtractBed	intrn	42125	42161	.	+	.	Parent=CGI_10004404;
	scaffold127	TRF	Tandem_Repeat	42125	42161	67	+	.	.
scaffold1272	subtractBed	intrn	23662	23701	.	-	.	Parent=CGI_10008304;
	scaffold1272	TRF	Tandem_Repeat	23662	23701	53	+	.	.
scaffold1272	subtractBed	intrn	31988	32032	.	+	.	Parent=CGI_10008305;
	scaffold1272	TRF	Tandem_Repeat	31988	32032	54	+	.	.
scaffold1272	subtractBed	intrn	71736	71788	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	71736	71788	106	+	.	.
scaffold1272	subtractBed	intrn	73393	73467	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	73393	73467	105	+	.	.
scaffold1272	subtractBed	intrn	73393	73464	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	73393	73464	117	+	.	.
scaffold1272	subtractBed	intrn	74008	74284	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	74008	74284	455	+	.	.
scaffold1272	subtractBed	intrn	76450	77046	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	76450	77046	685	+	.	.
scaffold1272	subtractBed	intrn	80684	80727	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	80684	80727	88	+	.	.
scaffold1272	subtractBed	intrn	91091	91145	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	91091	91145	53	+	.	.
scaffold1272	subtractBed	intrn	94606	94648	.	+	.	Parent=CGI_10008307;
	scaffold1272	TRF	Tandem_Repeat	94606	94648	86	+	.	.
scaffold1272	subtractBed	intrn	90154	90681	.	+	.	Parent=CGI_10008307;
	scaffold1272	WUBlastX	LINE_Penelope	90154	90681	61	+	.	.
scaffold1272	subtractBed	intrn	161385	162092	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	DNA_Harbinger	161385	162092	373	-	.	.
scaffold1272	subtractBed	intrn	167145	168152	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	LTR_Ngaro	167145	168152	468	-	.	.
scaffold1272	subtractBed	intrn	166458	166871	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	LTR_Ngaro	166458	166871	27	-	.	.
scaffold1272	subtractBed	intrn	166458	166682	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	LTR_Ngaro	166458	166682	50	-	.	.
scaffold1272	subtractBed	intrn	167091	168374	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	LTR_Ngaro	167091	168374	353	-	.	.
scaffold1272	subtractBed	intrn	181120	181392	.	-	.	Parent=CGI_10008310;
	scaffold1272	WUBlastX	LTR_Ngaro	181120	181392	81	-	.	.
scaffold1272	subtractBed	intrn	192715	192762	.	-	.	Parent=CGI_10008310;
	scaffold1272	TRF	Tandem_Repeat	192715	192762	96	+	.	.
scaffold1272	subtractBed	intrn	192763	192793	.	-	.	Parent=CGI_10008310;
	scaffold1272	TRF	Tandem_Repeat	192763	192793	62	+	.	.
scaffold1276	subtractBed	intrn	28988	29221	.	-	.	Parent=CGI_10003438;
	scaffold1276	WUBlastX	LINE_RTE-BovB	28988	29221	78	+	.	.
scaffold1276	subtractBed	intrn	36161	36191	.	-	.	Parent=CGI_10003438;
	scaffold1276	TRF	Tandem_Repeat	36161	36191	62	+	.	.
scaffold1276	subtractBed	intrn	39273	39972	.	-	.	Parent=CGI_10003438;
	scaffold1276	TRF	Tandem_Repeat	39273	39972	1014	+	.	.
scaffold1276	subtractBed	intrn	55341	55396	.	-	.	Parent=CGI_10003440;
	scaffold1276	TRF	Tandem_Repeat	55341	55396	112	+	.	.
scaffold1276	subtractBed	intrn	70641	70680	.	-	.	Parent=CGI_10003441;
	scaffold1276	TRF	Tandem_Repeat	70641	70680	80	+	.	.
scaffold1277	subtractBed	intrn	82675	82872	.	-	.	Parent=CGI_10008022;
	scaffold1277	WUBlastX	LINE_RTE-X	82675	82872	75	+	.	.
scaffold1277	subtractBed	intrn	82953	83873	.	-	.	Parent=CGI_10008022;
	scaffold1277	WUBlastX	LINE_RTE-X	82953	83873	277	+	.	.
scaffold1277	subtractBed	intrn	82723	82893	.	-	.	Parent=CGI_10008022;
	scaffold1277	WUBlastX	LINE_RTE-X	82723	82893	78	+	.	.
scaffold1277	subtractBed	intrn	82874	83008	.	-	.	Parent=CGI_10008022;
	scaffold1277	WUBlastX	LINE_RTE-X	82874	83008	59	+	.	.
scaffold1277	subtractBed	intrn	157629	157661	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	157629	157661	66	+	.	.
scaffold1277	subtractBed	intrn	161661	161790	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	161661	161790	95	+	.	.
scaffold1277	subtractBed	intrn	161776	162017	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	161776	162017	161	+	.	.
scaffold1277	subtractBed	intrn	161836	162017	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	161836	162017	166	+	.	.
scaffold1277	subtractBed	intrn	163470	163657	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	163470	163657	257	+	.	.
scaffold1277	subtractBed	intrn	163516	163657	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	163516	163657	112	+	.	.
scaffold1277	subtractBed	intrn	163525	163583	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	163525	163583	64	+	.	.
scaffold1277	subtractBed	intrn	169842	169901	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	169842	169901	120	+	.	.
scaffold1277	subtractBed	intrn	170318	170373	.	+	.	Parent=CGI_10008023;
	scaffold1277	TRF	Tandem_Repeat	170318	170373	94	+	.	.
scaffold1277	subtractBed	intrn	186010	186351	.	+	.	Parent=CGI_10008024;
	scaffold1277	TRF	Tandem_Repeat	186010	186351	316	+	.	.
scaffold1277	subtractBed	intrn	186027	186352	.	+	.	Parent=CGI_10008024;
	scaffold1277	TRF	Tandem_Repeat	186027	186352	372	+	.	.
scaffold1277	subtractBed	intrn	191892	192899	.	+	.	Parent=CGI_10008024;
	scaffold1277	WUBlastX	LTR_Gypsy	191892	192899	366	-	.	.
scaffold1277	subtractBed	intrn	192015	193082	.	+	.	Parent=CGI_10008024;
	scaffold1277	WUBlastX	LTR_Gypsy	192015	193082	228	-	.	.
scaffold1277	subtractBed	intrn	192063	192755	.	+	.	Parent=CGI_10008024;
	scaffold1277	WUBlastX	LTR_Gypsy	192063	192755	433	-	.	.
scaffold128	subtractBed	intrn	35968	35998	.	-	.	Parent=CGI_10021503;
	scaffold128	TRF	Tandem_Repeat	35968	35998	53	+	.	.
scaffold128	subtractBed	intrn	37057	37082	.	-	.	Parent=CGI_10021503;
	scaffold128	TRF	Tandem_Repeat	37057	37082	52	+	.	.
scaffold128	subtractBed	intrn	57217	58290	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_Kolobok-IS4	57217	58290	133	+	.	.
scaffold128	subtractBed	intrn	58710	59600	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_Kolobok-IS4	58710	59600	447	-	.	.
scaffold128	subtractBed	intrn	57415	58302	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_IS4EU	57415	58302	203	+	.	.
scaffold128	subtractBed	intrn	56494	56793	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_IS4EU	56494	56793	44	+	.	.
scaffold128	subtractBed	intrn	62917	62954	.	-	.	Parent=CGI_10021504;
	scaffold128	TRF	Tandem_Repeat	62917	62954	76	+	.	.
scaffold128	subtractBed	intrn	60752	60892	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_IS4EU	60752	60892	58	-	.	.
scaffold128	subtractBed	intrn	60626	60973	.	-	.	Parent=CGI_10021504;
	scaffold128	WUBlastX	DNA_IS4EU	60626	60973	57	-	.	.
scaffold128	subtractBed	intrn	78273	78363	.	+	.	Parent=CGI_10021506;
	scaffold128	TRF	Tandem_Repeat	78273	78363	80	+	.	.
scaffold128	subtractBed	intrn	78886	79008	.	+	.	Parent=CGI_10021506;
	scaffold128	TRF	Tandem_Repeat	78886	79008	97	+	.	.
scaffold128	subtractBed	intrn	78886	79000	.	+	.	Parent=CGI_10021506;
	scaffold128	TRF	Tandem_Repeat	78886	79000	123	+	.	.
scaffold128	subtractBed	intrn	93295	93429	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	93295	93429	44	-	.	.
scaffold128	subtractBed	intrn	87149	87376	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_TcMar-Tc1	87149	87376	87	+	.	.
scaffold128	subtractBed	intrn	87399	87713	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_TcMar-Tc1	87399	87713	61	+	.	.
scaffold128	subtractBed	intrn	97373	97526	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_Crypton	97373	97579	79	-	.	.
scaffold128	subtractBed	intrn	87026	87388	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_TcMar-Tc1	87026	87388	74	+	.	.
scaffold128	subtractBed	intrn	87402	87593	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_TcMar-Tc1	87402	87593	113	+	.	.
scaffold128	subtractBed	intrn	91097	92038	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_CR1-L2	91097	92038	56	+	.	.
scaffold128	subtractBed	intrn	87402	87644	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	DNA_TcMar-Tc1	87402	87644	100	+	.	.
scaffold128	subtractBed	intrn	93477	93617	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	93477	93617	41	-	.	.
scaffold128	subtractBed	intrn	93337	93471	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	93337	93471	57	-	.	.
scaffold128	subtractBed	intrn	93477	93545	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	93477	93545	47	-	.	.
scaffold128	subtractBed	intrn	94223	94699	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	94223	94699	185	-	.	.
scaffold128	subtractBed	intrn	96736	96900	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	96736	96900	72	-	.	.
scaffold128	subtractBed	intrn	91094	91849	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_L2	91094	91849	313	+	.	.
scaffold128	subtractBed	intrn	96760	96885	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	96760	96885	81	-	.	.
scaffold128	subtractBed	intrn	94121	94699	.	-	.	Parent=CGI_10021507;
	scaffold128	WUBlastX	LINE_Penelope	94121	94699	34	-	.	.
scaffold128	subtractBed	intrn	122299	122802	.	-	.	Parent=CGI_10021509;
	scaffold128	WUBlastX	LINE_RTE-X	122299	122802	112	+	.	.
scaffold128	subtractBed	intrn	122186	122311	.	-	.	Parent=CGI_10021509;
	scaffold128	WUBlastX	LINE_RTE-X	122186	122311	82	+	.	.
scaffold128	subtractBed	intrn	122015	122290	.	-	.	Parent=CGI_10021509;
	scaffold128	WUBlastX	LINE_RTE-X	122015	122290	43	+	.	.
scaffold128	subtractBed	intrn	174785	175021	.	+	.	Parent=CGI_10021511;
	scaffold128	TRF	Tandem_Repeat	174785	175021	183	+	.	.
scaffold128	subtractBed	intrn	176511	176549	.	+	.	Parent=CGI_10021511;
	scaffold128	TRF	Tandem_Repeat	176511	176549	51	+	.	.
scaffold128	subtractBed	intrn	318112	318159	.	+	.	Parent=CGI_10021517;
	scaffold128	TRF	Tandem_Repeat	318112	318159	96	+	.	.
scaffold128	subtractBed	intrn	375948	375999	.	-	.	Parent=CGI_10021518;
	scaffold128	TRF	Tandem_Repeat	375948	375999	86	+	.	.
scaffold128	subtractBed	intrn	375953	376002	.	-	.	Parent=CGI_10021518;
	scaffold128	TRF	Tandem_Repeat	375953	376002	73	+	.	.
scaffold128	subtractBed	intrn	375961	376002	.	-	.	Parent=CGI_10021518;
	scaffold128	TRF	Tandem_Repeat	375961	376002	57	+	.	.
scaffold128	subtractBed	intrn	400208	400254	.	+	.	Parent=CGI_10021520;
	scaffold128	TRF	Tandem_Repeat	400208	400254	51	+	.	.
scaffold128	subtractBed	intrn	412143	412633	.	+	.	Parent=CGI_10021521;
	scaffold128	TRF	Tandem_Repeat	412143	412633	470	+	.	.
scaffold128	subtractBed	intrn	412143	412781	.	+	.	Parent=CGI_10021521;
	scaffold128	TRF	Tandem_Repeat	412143	412781	481	+	.	.
scaffold128	subtractBed	intrn	412162	412773	.	+	.	Parent=CGI_10021521;
	scaffold128	TRF	Tandem_Repeat	412162	412773	470	+	.	.
scaffold128	subtractBed	intrn	412640	412770	.	+	.	Parent=CGI_10021521;
	scaffold128	TRF	Tandem_Repeat	412640	412770	108	+	.	.
scaffold128	subtractBed	intrn	454831	454888	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	454831	454888	116	+	.	.
scaffold128	subtractBed	intrn	464745	464909	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464745	464909	134	+	.	.
scaffold128	subtractBed	intrn	464744	464903	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464744	464903	193	+	.	.
scaffold128	subtractBed	intrn	464744	465215	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464744	465215	303	+	.	.
scaffold128	subtractBed	intrn	464971	465071	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464971	465071	148	+	.	.
scaffold128	subtractBed	intrn	464994	465242	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464994	465242	293	+	.	.
scaffold128	subtractBed	intrn	464994	465242	.	+	.	Parent=CGI_10021524;
	scaffold128	TRF	Tandem_Repeat	464994	465242	336	+	.	.
scaffold128	subtractBed	intrn	553707	553758	.	-	.	Parent=CGI_10021531;
	scaffold128	TRF	Tandem_Repeat	553707	553758	59	+	.	.
scaffold128	subtractBed	intrn	553725	553758	.	-	.	Parent=CGI_10021531;
	scaffold128	TRF	Tandem_Repeat	553725	553758	68	+	.	.
scaffold128	subtractBed	intrn	651020	651685	.	-	.	Parent=CGI_10021536;
	scaffold128	TRF	Tandem_Repeat	651020	651685	670	+	.	.
scaffold128	subtractBed	intrn	652412	654253	.	-	.	Parent=CGI_10021536;
	scaffold128	WUBlastX	LINE_RTE-X	652412	654253	770	+	.	.
scaffold128	subtractBed	intrn	651959	652027	.	-	.	Parent=CGI_10021536;
	scaffold128	WUBlastX	LINE_R1	651959	652027	21	+	.	.
scaffold128	subtractBed	intrn	652220	653419	.	-	.	Parent=CGI_10021536;
	scaffold128	WUBlastX	LINE_L2	652220	653419	213	+	.	.
scaffold1281	subtractBed	intrn	3938	3973	.	-	.	Parent=CGI_10001419;
	scaffold1281	WUBlastX	LINE_RTE-BovB	3938	4135	43	-	.	.
scaffold1281	subtractBed	intrn	7381	7566	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_Gypsy	7381	7566	34	+	.	.
scaffold1281	subtractBed	intrn	8724	9113	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	8724	9113	195	+	.	.
scaffold1281	subtractBed	intrn	12597	12875	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	12597	12875	193	-	.	.
scaffold1281	subtractBed	intrn	8053	8259	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	8053	8259	108	+	.	.
scaffold1281	subtractBed	intrn	10090	10386	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	10090	10386	194	+	.	.
scaffold1281	subtractBed	intrn	7932	8060	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	7932	8060	79	+	.	.
scaffold1281	subtractBed	intrn	8243	8944	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	8243	8944	394	+	.	.
scaffold1281	subtractBed	intrn	9807	10085	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	9807	10085	193	+	.	.
scaffold1281	subtractBed	intrn	8994	9158	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	8994	9158	66	+	.	.
scaffold1281	subtractBed	intrn	10416	10940	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	10416	10940	214	+	.	.
scaffold1281	subtractBed	intrn	11742	12266	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	11742	12266	214	-	.	.
scaffold1281	subtractBed	intrn	12296	12592	.	+	.	Parent=CGI_10001420;
	scaffold1281	WUBlastX	LTR_DIRS	12296	12592	203	-	.	.
scaffold1281	subtractBed	intrn	18579	18619	.	+	.	Parent=CGI_10001420;
	scaffold1281	TRF	Tandem_Repeat	18579	18619	82	+	.	.
scaffold1282	subtractBed	intrn	32042	32145	.	-	.	Parent=CGI_10003896;
	scaffold1282	TRF	Tandem_Repeat	32042	32145	199	+	.	.
scaffold1282	subtractBed	intrn	35752	35794	.	-	.	Parent=CGI_10003896;
	scaffold1282	TRF	Tandem_Repeat	35752	35794	86	+	.	.
scaffold1282	subtractBed	intrn	37183	37340	.	-	.	Parent=CGI_10003896;
	scaffold1282	TRF	Tandem_Repeat	37183	37340	129	+	.	.
scaffold1282	subtractBed	intrn	74841	75615	.	-	.	Parent=CGI_10003897;
	scaffold1282	TRF	Tandem_Repeat	74841	75615	1209	+	.	.
scaffold1283	subtractBed	intrn	12588	12621	.	+	.	Parent=CGI_10011780;
	scaffold1283	TRF	Tandem_Repeat	12588	12621	68	+	.	.
scaffold1283	subtractBed	intrn	26198	27248	.	-	.	Parent=CGI_10011782;
	scaffold1283	TRF	Tandem_Repeat	26197	27248	864	+	.	.
scaffold1283	subtractBed	intrn	26238	27234	.	-	.	Parent=CGI_10011782;
	scaffold1283	TRF	Tandem_Repeat	26238	27234	759	+	.	.
scaffold1283	subtractBed	intrn	27743	28433	.	-	.	Parent=CGI_10011782;
	scaffold1283	TRF	Tandem_Repeat	27743	28477	1326	+	.	.
scaffold1283	subtractBed	intrn	33685	33794	.	+	.	Parent=CGI_10011783;
	scaffold1283	TRF	Tandem_Repeat	33685	33794	148	+	.	.
scaffold1283	subtractBed	intrn	39210	39647	.	+	.	Parent=CGI_10011783;
	scaffold1283	WUBlastX	LINE_RTE-X	39210	39647	50	+	.	.
scaffold1283	subtractBed	intrn	38151	38600	.	+	.	Parent=CGI_10011783;
	scaffold1283	WUBlastX	LINE_RTE-X	38151	38600	146	+	.	.
scaffold1283	subtractBed	intrn	38235	38591	.	+	.	Parent=CGI_10011783;
	scaffold1283	WUBlastX	LINE_RTE-X	38235	38591	219	+	.	.
scaffold1283	subtractBed	intrn	38596	39495	.	+	.	Parent=CGI_10011783;
	scaffold1283	WUBlastX	LINE_RTE-X	38596	39495	166	+	.	.
scaffold1283	subtractBed	intrn	51684	51863	.	-	.	Parent=CGI_10011785;
	scaffold1283	WUBlastX	LINE_RTE-X	51684	51863	67	+	.	.
scaffold1283	subtractBed	intrn	51645	51986	.	-	.	Parent=CGI_10011785;
	scaffold1283	WUBlastX	LINE_RTE-X	51645	51986	52	+	.	.
scaffold1283	subtractBed	intrn	55884	57181	.	-	.	Parent=CGI_10011785;
	scaffold1283	TRF	Tandem_Repeat	55884	57181	1596	+	.	.
scaffold1283	subtractBed	intrn	57617	58494	.	-	.	Parent=CGI_10011785;
	scaffold1283	TRF	Tandem_Repeat	57617	58494	882	+	.	.
scaffold1283	subtractBed	intrn	57617	58494	.	-	.	Parent=CGI_10011785;
	scaffold1283	TRF	Tandem_Repeat	57617	58494	915	+	.	.
scaffold1283	subtractBed	intrn	60014	60163	.	-	.	Parent=CGI_10011785;
	scaffold1283	TRF	Tandem_Repeat	60014	60163	149	+	.	.
scaffold1283	subtractBed	intrn	60273	60459	.	-	.	Parent=CGI_10011785;
	scaffold1283	TRF	Tandem_Repeat	60273	60459	239	+	.	.
scaffold1283	subtractBed	intrn	65166	67128	.	-	.	Parent=CGI_10011786;
	scaffold1283	TRF	Tandem_Repeat	65166	67128	2657	+	.	.
scaffold1283	subtractBed	intrn	65166	67128	.	-	.	Parent=CGI_10011786;
	scaffold1283	TRF	Tandem_Repeat	65166	67128	2675	+	.	.
scaffold1283	subtractBed	intrn	163819	163890	.	-	.	Parent=CGI_10011792;
	scaffold1283	TRF	Tandem_Repeat	163819	163890	56	+	.	.
scaffold1283	subtractBed	intrn	215483	215597	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	215483	215597	58	+	.	.
scaffold1283	subtractBed	intrn	215474	215765	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	215474	215765	404	+	.	.
scaffold1283	subtractBed	intrn	215481	215828	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	215481	215828	239	+	.	.
scaffold1283	subtractBed	intrn	215755	216658	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	215755	216658	992	+	.	.
scaffold1283	subtractBed	intrn	219553	219859	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	219553	219859	176	+	.	.
scaffold1283	subtractBed	intrn	219606	219920	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	219606	219920	434	+	.	.
scaffold1283	subtractBed	intrn	222956	223130	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	222956	223130	341	+	.	.
scaffold1283	subtractBed	intrn	226509	226554	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	226509	226554	67	+	.	.
scaffold1283	subtractBed	intrn	226506	226559	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	226506	226559	67	+	.	.
scaffold1283	subtractBed	intrn	226893	227101	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	226893	227101	364	+	.	.
scaffold1283	subtractBed	intrn	234005	234280	.	-	.	Parent=CGI_10011794;
	scaffold1283	TRF	Tandem_Repeat	234005	234280	543	+	.	.
scaffold1283	subtractBed	intrn	241859	241910	.	-	.	Parent=CGI_10011796;
	scaffold1283	TRF	Tandem_Repeat	241859	241910	104	+	.	.
scaffold1283	subtractBed	intrn	245660	245763	.	-	.	Parent=CGI_10011796;
	scaffold1283	TRF	Tandem_Repeat	245660	245763	190	+	.	.
scaffold1283	subtractBed	intrn	249818	249931	.	-	.	Parent=CGI_10011796;
	scaffold1283	WUBlastX	DNA_TcMar-Marin	249818	249931	46	+	.	.
scaffold1283	subtractBed	intrn	250376	250573	.	-	.	Parent=CGI_10011796;
	scaffold1283	WUBlastX	DNA_TcMar-Marin	250376	250573	27	+	.	.
scaffold1286	subtractBed	intrn	4442	4600	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_CR1	4442	4600	37	-	.	.
scaffold1286	subtractBed	intrn	4242	4367	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_L2	4242	4367	29	-	.	.
scaffold1286	subtractBed	intrn	4412	4600	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_CR1	4412	4600	36	-	.	.
scaffold1286	subtractBed	intrn	4826	5056	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_CR1	4826	5056	90	-	.	.
scaffold1286	subtractBed	intrn	4189	4302	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_CR1	4189	4302	27	-	.	.
scaffold1286	subtractBed	intrn	4799	5122	.	-	.	Parent=CGI_10009504;
	scaffold1286	WUBlastX	LINE_CR1	4799	5122	59	-	.	.
scaffold1286	subtractBed	intrn	12464	12503	.	+	.	Parent=CGI_10009505;
	scaffold1286	TRF	Tandem_Repeat	12464	12503	80	+	.	.
scaffold1286	subtractBed	intrn	31515	31649	.	+	.	Parent=CGI_10009508;
	scaffold1286	WUBlastX	DNA_TcMar-Tc2	31515	31649	71	-	.	.
scaffold1286	subtractBed	intrn	31619	31954	.	+	.	Parent=CGI_10009508;
	scaffold1286	WUBlastX	DNA_TcMar-Tc2	31619	31954	70	-	.	.
scaffold1286	subtractBed	intrn	66473	66548	.	-	.	Parent=CGI_10009511;
	scaffold1286	TRF	Tandem_Repeat	66473	66548	80	+	.	.
scaffold1286	subtractBed	intrn	66478	66548	.	-	.	Parent=CGI_10009511;
	scaffold1286	TRF	Tandem_Repeat	66478	66548	97	+	.	.
scaffold1286	subtractBed	intrn	114432	114557	.	-	.	Parent=CGI_10009514;
	scaffold1286	WUBlastX	LINE_CR1	114432	114557	95	-	.	.
scaffold1286	subtractBed	intrn	114432	114674	.	-	.	Parent=CGI_10009514;
	scaffold1286	WUBlastX	LINE_CR1	114432	114674	61	-	.	.
scaffold1286	subtractBed	intrn	114146	114373	.	-	.	Parent=CGI_10009514;
	scaffold1286	WUBlastX	LINE_CR1	114146	114373	99	-	.	.
scaffold1286	subtractBed	intrn	114228	114698	.	-	.	Parent=CGI_10009514;
	scaffold1286	WUBlastX	LINE_CR1	114228	114698	50	-	.	.
scaffold1286	subtractBed	intrn	176895	176942	.	+	.	Parent=CGI_10009516;
	scaffold1286	TRF	Tandem_Repeat	176895	176942	96	+	.	.
scaffold1286	subtractBed	intrn	188814	188888	.	+	.	Parent=CGI_10009517;
	scaffold1286	TRF	Tandem_Repeat	188814	188888	116	+	.	.
scaffold1288	subtractBed	intrn	46394	46446	.	-	.	Parent=CGI_10010912;
	scaffold1288	TRF	Tandem_Repeat	46394	46446	51	+	.	.
scaffold1288	subtractBed	intrn	46409	46451	.	-	.	Parent=CGI_10010912;
	scaffold1288	TRF	Tandem_Repeat	46409	46451	68	+	.	.
scaffold1288	subtractBed	intrn	55633	55799	.	-	.	Parent=CGI_10010913;
	scaffold1288	TRF	Tandem_Repeat	55633	55799	235	+	.	.
scaffold1288	subtractBed	intrn	58042	58405	.	-	.	Parent=CGI_10010913;
	scaffold1288	TRF	Tandem_Repeat	58042	58405	385	+	.	.
scaffold1288	subtractBed	intrn	58051	58405	.	-	.	Parent=CGI_10010913;
	scaffold1288	TRF	Tandem_Repeat	58051	58405	471	+	.	.
scaffold1288	subtractBed	intrn	58024	58381	.	-	.	Parent=CGI_10010913;
	scaffold1288	TRF	Tandem_Repeat	58024	58381	467	+	.	.
scaffold1288	subtractBed	intrn	60479	60737	.	-	.	Parent=CGI_10010913;
	scaffold1288	TRF	Tandem_Repeat	60479	60737	241	+	.	.
scaffold1288	subtractBed	intrn	112357	112404	.	+	.	Parent=CGI_10010915;
	scaffold1288	TRF	Tandem_Repeat	112357	112404	96	+	.	.
scaffold1288	subtractBed	intrn	115063	115389	.	+	.	Parent=CGI_10010915;
	scaffold1288	TRF	Tandem_Repeat	115063	115389	434	+	.	.
scaffold1288	subtractBed	intrn	116594	116870	.	+	.	Parent=CGI_10010915;
	scaffold1288	TRF	Tandem_Repeat	116594	116870	308	+	.	.
scaffold1288	subtractBed	intrn	116580	116695	.	+	.	Parent=CGI_10010915;
	scaffold1288	TRF	Tandem_Repeat	116580	116695	65	+	.	.
scaffold1288	subtractBed	intrn	136519	136821	.	-	.	Parent=CGI_10010916;
	scaffold1288	TRF	Tandem_Repeat	136519	136821	510	+	.	.
scaffold1288	subtractBed	intrn	138351	138722	.	-	.	Parent=CGI_10010916;
	scaffold1288	TRF	Tandem_Repeat	138351	138722	478	+	.	.
scaffold1288	subtractBed	intrn	138351	138733	.	-	.	Parent=CGI_10010916;
	scaffold1288	TRF	Tandem_Repeat	138351	138733	423	+	.	.
scaffold1288	subtractBed	intrn	145539	145754	.	-	.	Parent=CGI_10010916;
	scaffold1288	TRF	Tandem_Repeat	145539	145754	180	+	.	.
scaffold1288	subtractBed	intrn	155863	155934	.	-	.	Parent=CGI_10010916;
	scaffold1288	TRF	Tandem_Repeat	155863	155934	65	+	.	.
scaffold1288	subtractBed	intrn	155863	155934	.	+	.	Parent=CGI_10010917;
	scaffold1288	TRF	Tandem_Repeat	155863	155934	65	+	.	.
scaffold1288	subtractBed	intrn	164678	164985	.	+	.	Parent=CGI_10010917;
	scaffold1288	TRF	Tandem_Repeat	164678	164985	537	+	.	.
scaffold1288	subtractBed	intrn	167279	167537	.	+	.	Parent=CGI_10010917;
	scaffold1288	TRF	Tandem_Repeat	167279	167578	420	+	.	.
scaffold1288	subtractBed	intrn	182314	182362	.	+	.	Parent=CGI_10010918;
	scaffold1288	TRF	Tandem_Repeat	182314	182362	98	+	.	.
scaffold1288	subtractBed	intrn	245186	245303	.	-	.	Parent=CGI_10010924;
	scaffold1288	TRF	Tandem_Repeat	245166	245303	174	+	.	.
scaffold1288	subtractBed	intrn	255275	255563	.	+	.	Parent=CGI_10010925;
	scaffold1288	TRF	Tandem_Repeat	255275	255563	416	+	.	.
scaffold1288	subtractBed	intrn	255275	256003	.	+	.	Parent=CGI_10010925;
	scaffold1288	TRF	Tandem_Repeat	255275	256003	879	+	.	.
scaffold1288	subtractBed	intrn	255566	256003	.	+	.	Parent=CGI_10010925;
	scaffold1288	TRF	Tandem_Repeat	255566	256003	585	+	.	.
scaffold1293	subtractBed	intrn	128897	128944	.	+	.	Parent=CGI_10015859;
	scaffold1293	TRF	Tandem_Repeat	128897	128944	96	+	.	.
scaffold1293	subtractBed	intrn	132779	132852	.	+	.	Parent=CGI_10015859;
	scaffold1293	TRF	Tandem_Repeat	132779	132852	87	+	.	.
scaffold1293	subtractBed	intrn	133022	134534	.	+	.	Parent=CGI_10015859;
	scaffold1293	TRF	Tandem_Repeat	133022	134534	2145	+	.	.
scaffold1293	subtractBed	intrn	165779	166146	.	-	.	Parent=CGI_10015860;
	scaffold1293	TRF	Tandem_Repeat	165762	166146	467	+	.	.
scaffold1293	subtractBed	intrn	181427	181615	.	-	.	Parent=CGI_10015860;
	scaffold1293	TRF	Tandem_Repeat	181427	181615	360	+	.	.
scaffold1293	subtractBed	intrn	181759	181895	.	-	.	Parent=CGI_10015860;
	scaffold1293	TRF	Tandem_Repeat	181759	181895	265	+	.	.
scaffold1293	subtractBed	intrn	301424	301457	.	-	.	Parent=CGI_10015868;
	scaffold1293	TRF	Tandem_Repeat	301424	301457	68	+	.	.
scaffold1293	subtractBed	intrn	308672	308706	.	-	.	Parent=CGI_10015868;
	scaffold1293	TRF	Tandem_Repeat	308672	308706	70	+	.	.
scaffold1293	subtractBed	intrn	319027	319097	.	-	.	Parent=CGI_10015869;
	scaffold1293	TRF	Tandem_Repeat	319027	319097	88	+	.	.
scaffold1293	subtractBed	intrn	320937	321041	.	-	.	Parent=CGI_10015869;
	scaffold1293	TRF	Tandem_Repeat	320937	321041	103	+	.	.
scaffold1293	subtractBed	intrn	327085	327125	.	-	.	Parent=CGI_10015869;
	scaffold1293	TRF	Tandem_Repeat	327085	327125	82	+	.	.
scaffold1293	subtractBed	intrn	345724	345750	.	-	.	Parent=CGI_10015869;
	scaffold1293	TRF	Tandem_Repeat	345724	345750	54	+	.	.
scaffold1293	subtractBed	intrn	386772	386816	.	+	.	Parent=CGI_10015872;
	scaffold1293	TRF	Tandem_Repeat	386772	386816	81	+	.	.
scaffold1293	subtractBed	intrn	390279	390313	.	+	.	Parent=CGI_10015872;
	scaffold1293	TRF	Tandem_Repeat	390279	390313	70	+	.	.
scaffold1293	subtractBed	intrn	386772	386816	.	-	.	Parent=CGI_10015873;
	scaffold1293	TRF	Tandem_Repeat	386772	386816	81	+	.	.
scaffold1293	subtractBed	intrn	390279	390313	.	-	.	Parent=CGI_10015873;
	scaffold1293	TRF	Tandem_Repeat	390279	390313	70	+	.	.
scaffold1293	subtractBed	intrn	433032	433329	.	+	.	Parent=CGI_10015875;
	scaffold1293	TRF	Tandem_Repeat	433032	433329	233	+	.	.
scaffold1293	subtractBed	intrn	433669	433977	.	+	.	Parent=CGI_10015875;
	scaffold1293	TRF	Tandem_Repeat	433669	433977	343	+	.	.
scaffold1299	subtractBed	intrn	28550	28593	.	+	.	Parent=CGI_10007576;
	scaffold1299	TRF	Tandem_Repeat	28550	28593	88	+	.	.
scaffold1299	subtractBed	intrn	31538	31639	.	+	.	Parent=CGI_10007576;
	scaffold1299	TRF	Tandem_Repeat	31538	31639	188	+	.	.
scaffold1299	subtractBed	intrn	59675	59779	.	-	.	Parent=CGI_10007577;
	scaffold1299	TRF	Tandem_Repeat	59675	59779	56	+	.	.
scaffold1299	subtractBed	intrn	59701	59765	.	-	.	Parent=CGI_10007577;
	scaffold1299	TRF	Tandem_Repeat	59701	59765	67	+	.	.
scaffold1299	subtractBed	intrn	124854	124928	.	-	.	Parent=CGI_10007583;
	scaffold1299	TRF	Tandem_Repeat	124854	124928	150	+	.	.
scaffold1299	subtractBed	intrn	125332	125391	.	-	.	Parent=CGI_10007583;
	scaffold1299	TRF	Tandem_Repeat	125332	125391	111	+	.	.
scaffold1299	subtractBed	intrn	133678	133713	.	+	.	Parent=CGI_10007586;
	scaffold1299	TRF	Tandem_Repeat	133678	133713	72	+	.	.
scaffold1299	subtractBed	intrn	137018	137091	.	+	.	Parent=CGI_10007586;
	scaffold1299	TRF	Tandem_Repeat	137018	137091	148	+	.	.
scaffold1299	subtractBed	intrn	141262	141357	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	141262	141357	69	-	.	.
scaffold1299	subtractBed	intrn	141478	141612	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	141478	141612	81	-	.	.
scaffold1299	subtractBed	intrn	141478	141657	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	141478	141657	58	-	.	.
scaffold1299	subtractBed	intrn	139911	140441	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	139911	140441	234	-	.	.
scaffold1299	subtractBed	intrn	140527	140601	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	140527	140601	33	-	.	.
scaffold1299	subtractBed	intrn	141360	141473	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	141360	141473	71	-	.	.
scaffold1299	subtractBed	intrn	139259	139771	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	139259	139771	137	-	.	.
scaffold1299	subtractBed	intrn	140606	141202	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	140606	141202	162	-	.	.
scaffold1299	subtractBed	intrn	139995	140450	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	139995	140450	296	-	.	.
scaffold1299	subtractBed	intrn	139253	139909	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_RTE-BovB	139253	139909	42	-	.	.
scaffold1299	subtractBed	intrn	138494	138661	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_L1	138494	138661	60	-	.	.
scaffold1299	subtractBed	intrn	140007	140579	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_L1	140007	140579	95	-	.	.
scaffold1299	subtractBed	intrn	138488	138685	.	+	.	Parent=CGI_10007586;
	scaffold1299	WUBlastX	LINE_L1-Tx1	138488	138685	47	-	.	.
scaffold1299	subtractBed	intrn	156208	156246	.	+	.	Parent=CGI_10007586;
	scaffold1299	TRF	Tandem_Repeat	156208	156246	53	+	.	.
scaffold1299	subtractBed	intrn	164930	164963	.	+	.	Parent=CGI_10007586;
	scaffold1299	TRF	Tandem_Repeat	164930	164963	59	+	.	.
scaffold13	subtractBed	intrn	7062	7094	.	+	.	Parent=CGI_10013194;
	scaffold13	TRF	Tandem_Repeat	7062	7094	59	+	.	.
scaffold13	subtractBed	intrn	24728	24785	.	-	.	Parent=CGI_10013195;
	scaffold13	TRF	Tandem_Repeat	24728	24785	102	+	.	.
scaffold13	subtractBed	intrn	72427	73363	.	-	.	Parent=CGI_10013198;
	scaffold13	TRF	Tandem_Repeat	72427	73363	1119	+	.	.
scaffold13	subtractBed	intrn	78552	78683	.	-	.	Parent=CGI_10013198;
	scaffold13	TRF	Tandem_Repeat	78552	78683	94	+	.	.
scaffold13	subtractBed	intrn	87408	87779	.	-	.	Parent=CGI_10013198;
	scaffold13	TRF	Tandem_Repeat	87408	87799	651	+	.	.
scaffold13	subtractBed	intrn	87408	87779	.	-	.	Parent=CGI_10013198;
	scaffold13	TRF	Tandem_Repeat	87408	87802	576	+	.	.
scaffold13	subtractBed	intrn	96891	97346	.	+	.	Parent=CGI_10013200;
	scaffold13	TRF	Tandem_Repeat	96865	97346	653	+	.	.
scaffold13	subtractBed	intrn	98029	98244	.	+	.	Parent=CGI_10013200;
	scaffold13	TRF	Tandem_Repeat	98029	98244	243	+	.	.
scaffold13	subtractBed	intrn	98864	99012	.	+	.	Parent=CGI_10013200;
	scaffold13	TRF	Tandem_Repeat	98846	99012	250	+	.	.
scaffold13	subtractBed	intrn	98864	99032	.	+	.	Parent=CGI_10013200;
	scaffold13	TRF	Tandem_Repeat	98846	99032	218	+	.	.
scaffold13	subtractBed	intrn	100409	100523	.	+	.	Parent=CGI_10013200;
	scaffold13	TRF	Tandem_Repeat	100409	100523	94	+	.	.
scaffold13	subtractBed	intrn	106805	107316	.	+	.	Parent=CGI_10013201;
	scaffold13	TRF	Tandem_Repeat	106791	107316	701	+	.	.
scaffold13	subtractBed	intrn	113072	113792	.	+	.	Parent=CGI_10013202;
	scaffold13	TRF	Tandem_Repeat	113053	113792	519	+	.	.
scaffold13	subtractBed	intrn	113072	113792	.	+	.	Parent=CGI_10013202;
	scaffold13	TRF	Tandem_Repeat	113057	113792	626	+	.	.
scaffold13	subtractBed	intrn	116508	116574	.	+	.	Parent=CGI_10013202;
	scaffold13	TRF	Tandem_Repeat	116508	116574	80	+	.	.
scaffold13	subtractBed	intrn	117980	118046	.	+	.	Parent=CGI_10013202;
	scaffold13	TRF	Tandem_Repeat	117980	118046	80	+	.	.
scaffold13	subtractBed	intrn	126592	126987	.	+	.	Parent=CGI_10013204;
	scaffold13	WUBlastX	LINE_Penelope	126592	126987	33	+	.	.
scaffold13	subtractBed	intrn	172105	172121	.	+	.	Parent=CGI_10013207;
	scaffold13	WUBlastX	DNA_hAT-Blackja	171969	172121	26	+	.	.
scaffold13	subtractBed	intrn	172275	172496	.	+	.	Parent=CGI_10013207;
	scaffold13	WUBlastX	DNA_hAT-Blackja	172275	172496	46	+	.	.
scaffold13	subtractBed	intrn	173581	174089	.	+	.	Parent=CGI_10013207;
	scaffold13	TRF	Tandem_Repeat	173581	174089	493	+	.	.
scaffold13	subtractBed	intrn	174562	174696	.	+	.	Parent=CGI_10013207;
	scaffold13	TRF	Tandem_Repeat	174562	174696	227	+	.	.
scaffold13	subtractBed	intrn	180657	180703	.	+	.	Parent=CGI_10013207;
	scaffold13	TRF	Tandem_Repeat	180657	180703	78	+	.	.
scaffold13	subtractBed	intrn	180658	180707	.	+	.	Parent=CGI_10013207;
	scaffold13	TRF	Tandem_Repeat	180658	180707	66	+	.	.
scaffold13	subtractBed	intrn	187467	187500	.	+	.	Parent=CGI_10013207;
	scaffold13	TRF	Tandem_Repeat	187467	187500	68	+	.	.
scaffold13	subtractBed	intrn	193030	193050	.	+	.	Parent=CGI_10013207;
	scaffold13	WUBlastX	DNA_IS4EU	192397	193050	60	+	.	.
scaffold13	subtractBed	intrn	193030	193032	.	+	.	Parent=CGI_10013207;
	scaffold13	WUBlastX	DNA_IS4EU	192130	193032	28	+	.	.
scaffold1301	subtractBed	intrn	71272	71305	.	-	.	Parent=CGI_10027704;
	scaffold1301	TRF	Tandem_Repeat	71272	71305	68	+	.	.
scaffold1301	subtractBed	intrn	162729	163118	.	+	.	Parent=CGI_10027708;
	scaffold1301	TRF	Tandem_Repeat	162729	163118	227	+	.	.
scaffold1301	subtractBed	intrn	210113	210166	.	+	.	Parent=CGI_10027709;
	scaffold1301	TRF	Tandem_Repeat	210113	210166	108	+	.	.
scaffold1301	subtractBed	intrn	242007	242088	.	+	.	Parent=CGI_10027711;
	scaffold1301	TRF	Tandem_Repeat	242007	242088	164	+	.	.
scaffold1301	subtractBed	intrn	316598	317287	.	-	.	Parent=CGI_10027714;
	scaffold1301	WUBlastX	LTR_Ngaro	316598	317287	142	+	.	.
scaffold1301	subtractBed	intrn	318962	319939	.	-	.	Parent=CGI_10027714;
	scaffold1301	WUBlastX	LTR_Ngaro	318962	319939	346	+	.	.
scaffold1301	subtractBed	intrn	317475	319052	.	-	.	Parent=CGI_10027714;
	scaffold1301	WUBlastX	LTR_Ngaro	317475	319052	1078	+	.	.
scaffold1301	subtractBed	intrn	319673	319991	.	-	.	Parent=CGI_10027714;
	scaffold1301	WUBlastX	LTR_Ngaro	319673	319993	38	+	.	.
scaffold1301	subtractBed	intrn	316577	317398	.	-	.	Parent=CGI_10027714;
	scaffold1301	WUBlastX	LTR_Ngaro	316577	317398	48	+	.	.
scaffold1301	subtractBed	intrn	351076	351102	.	+	.	Parent=CGI_10027715;
	scaffold1301	TRF	Tandem_Repeat	351076	351102	54	+	.	.
scaffold1301	subtractBed	intrn	436494	436531	.	-	.	Parent=CGI_10027721;
	scaffold1301	TRF	Tandem_Repeat	436494	436531	76	+	.	.
scaffold1301	subtractBed	intrn	439885	440044	.	-	.	Parent=CGI_10027721;
	scaffold1301	TRF	Tandem_Repeat	439885	440044	178	+	.	.
scaffold1301	subtractBed	intrn	460845	461054	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	460845	461054	115	+	.	.
scaffold1301	subtractBed	intrn	460891	461810	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	460891	461810	1005	+	.	.
scaffold1301	subtractBed	intrn	460891	461810	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	460891	461810	1168	+	.	.
scaffold1301	subtractBed	intrn	470373	470598	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	470356	470598	179	+	.	.
scaffold1301	subtractBed	intrn	470601	471343	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	470601	471343	728	+	.	.
scaffold1301	subtractBed	intrn	470470	471264	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	470470	471264	423	+	.	.
scaffold1301	subtractBed	intrn	476017	476076	.	+	.	Parent=CGI_10027722;
	scaffold1301	TRF	Tandem_Repeat	476017	476076	50	+	.	.
scaffold1301	subtractBed	intrn	552313	553804	.	+	.	Parent=CGI_10027730;
	scaffold1301	TRF	Tandem_Repeat	552313	553804	1115	+	.	.
scaffold1301	subtractBed	intrn	552313	553769	.	+	.	Parent=CGI_10027730;
	scaffold1301	TRF	Tandem_Repeat	552313	553769	1095	+	.	.
scaffold1301	subtractBed	intrn	552983	553804	.	+	.	Parent=CGI_10027730;
	scaffold1301	TRF	Tandem_Repeat	552983	553804	710	+	.	.
scaffold1301	subtractBed	intrn	564500	564536	.	+	.	Parent=CGI_10027730;
	scaffold1301	TRF	Tandem_Repeat	564500	564536	67	+	.	.
scaffold1301	subtractBed	intrn	552313	553804	.	-	.	Parent=CGI_10027731;
	scaffold1301	TRF	Tandem_Repeat	552313	553804	1115	+	.	.
scaffold1301	subtractBed	intrn	552313	553769	.	-	.	Parent=CGI_10027731;
	scaffold1301	TRF	Tandem_Repeat	552313	553769	1095	+	.	.
scaffold1301	subtractBed	intrn	552983	553804	.	-	.	Parent=CGI_10027731;
	scaffold1301	TRF	Tandem_Repeat	552983	553804	710	+	.	.
scaffold1301	subtractBed	intrn	564500	564536	.	-	.	Parent=CGI_10027731;
	scaffold1301	TRF	Tandem_Repeat	564500	564536	67	+	.	.
scaffold1301	subtractBed	intrn	570550	571374	.	+	.	Parent=CGI_10027732;
	scaffold1301	TRF	Tandem_Repeat	570550	571374	1094	+	.	.
scaffold1301	subtractBed	intrn	572456	573232	.	+	.	Parent=CGI_10027732;
	scaffold1301	TRF	Tandem_Repeat	572456	573232	1187	+	.	.
scaffold1301	subtractBed	intrn	622496	622531	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	622496	622531	72	+	.	.
scaffold1301	subtractBed	intrn	623138	623180	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	623138	623180	86	+	.	.
scaffold1301	subtractBed	intrn	625536	625952	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	625536	625952	252	-	.	.
scaffold1301	subtractBed	intrn	625952	626239	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	625952	626239	197	-	.	.
scaffold1301	subtractBed	intrn	627195	627569	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	627195	627569	130	-	.	.
scaffold1301	subtractBed	intrn	627496	627915	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	627496	627915	221	-	.	.
scaffold1301	subtractBed	intrn	624634	625536	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	624634	625536	786	-	.	.
scaffold1301	subtractBed	intrn	627923	628330	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	627923	628330	279	-	.	.
scaffold1301	subtractBed	intrn	628382	628711	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	628382	628711	22	-	.	.
scaffold1301	subtractBed	intrn	625952	626311	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	625952	626311	36	-	.	.
scaffold1301	subtractBed	intrn	627923	628651	.	+	.	Parent=CGI_10027735;
	scaffold1301	WUBlastX	LTR_Pao	627923	628651	250	-	.	.
scaffold1301	subtractBed	intrn	647161	647203	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	647161	647203	86	+	.	.
scaffold1301	subtractBed	intrn	648238	648301	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	648238	648301	128	+	.	.
scaffold1301	subtractBed	intrn	651725	651765	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	651725	651765	73	+	.	.
scaffold1301	subtractBed	intrn	658773	658838	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	658773	658838	114	+	.	.
scaffold1301	subtractBed	intrn	660344	661009	.	+	.	Parent=CGI_10027735;
	scaffold1301	TRF	Tandem_Repeat	660344	661009	1000	+	.	.
scaffold1301	subtractBed	intrn	694411	694675	.	-	.	Parent=CGI_10027737;
	scaffold1301	TRF	Tandem_Repeat	694411	694675	408	+	.	.
scaffold1301	subtractBed	intrn	768409	768433	.	+	.	Parent=CGI_10027741;
	scaffold1301	TRF	Tandem_Repeat	768409	768433	50	+	.	.
scaffold1301	subtractBed	intrn	789188	789234	.	+	.	Parent=CGI_10027743;
	scaffold1301	TRF	Tandem_Repeat	789188	789234	94	+	.	.
scaffold1301	subtractBed	intrn	789571	789619	.	+	.	Parent=CGI_10027743;
	scaffold1301	TRF	Tandem_Repeat	789571	789619	98	+	.	.
scaffold1301	subtractBed	intrn	792548	792604	.	+	.	Parent=CGI_10027743;
	scaffold1301	TRF	Tandem_Repeat	792548	792604	114	+	.	.
scaffold1301	subtractBed	intrn	792941	792989	.	+	.	Parent=CGI_10027743;
	scaffold1301	TRF	Tandem_Repeat	792941	792989	98	+	.	.
scaffold1301	subtractBed	intrn	795598	795654	.	+	.	Parent=CGI_10027743;
	scaffold1301	WUBlastX	DNA_MuDR	795598	795894	24	-	.	.
scaffold1301	subtractBed	intrn	795999	796262	.	+	.	Parent=CGI_10027743;
	scaffold1301	WUBlastX	DNA_MuDR	795999	796262	118	-	.	.
scaffold1301	subtractBed	intrn	796026	796304	.	+	.	Parent=CGI_10027743;
	scaffold1301	WUBlastX	DNA_MuDR	796026	796304	100	-	.	.
scaffold1301	subtractBed	intrn	796383	796631	.	+	.	Parent=CGI_10027743;
	scaffold1301	WUBlastX	DNA_MuDR	796383	796631	110	-	.	.
scaffold1301	subtractBed	intrn	796035	796352	.	+	.	Parent=CGI_10027743;
	scaffold1301	WUBlastX	DNA_MuDR	796035	796352	86	-	.	.
scaffold1301	subtractBed	intrn	795999	796262	.	-	.	Parent=CGI_10027744;
	scaffold1301	WUBlastX	DNA_MuDR	795999	796262	118	-	.	.
scaffold1301	subtractBed	intrn	796026	796304	.	-	.	Parent=CGI_10027744;
	scaffold1301	WUBlastX	DNA_MuDR	796026	796304	100	-	.	.
scaffold1301	subtractBed	intrn	796383	796631	.	-	.	Parent=CGI_10027744;
	scaffold1301	WUBlastX	DNA_MuDR	796383	796631	110	-	.	.
scaffold1301	subtractBed	intrn	796035	796352	.	-	.	Parent=CGI_10027744;
	scaffold1301	WUBlastX	DNA_MuDR	796035	796352	86	-	.	.
scaffold1301	subtractBed	intrn	838758	838787	.	+	.	Parent=CGI_10027745;
	scaffold1301	TRF	Tandem_Repeat	838758	838787	51	+	.	.
scaffold1301	subtractBed	intrn	894610	895462	.	+	.	Parent=CGI_10027746;
	scaffold1301	TRF	Tandem_Repeat	894610	895462	1463	+	.	.
scaffold1301	subtractBed	intrn	922775	922821	.	-	.	Parent=CGI_10027749;
	scaffold1301	TRF	Tandem_Repeat	922775	922821	51	+	.	.
scaffold1301	subtractBed	intrn	945397	945428	.	+	.	Parent=CGI_10027751;
	scaffold1301	TRF	Tandem_Repeat	945397	945428	64	+	.	.
scaffold1301	subtractBed	intrn	945545	946312	.	+	.	Parent=CGI_10027751;
	scaffold1301	TRF	Tandem_Repeat	945545	946312	976	+	.	.
scaffold1301	subtractBed	intrn	947076	947207	.	+	.	Parent=CGI_10027751;
	scaffold1301	TRF	Tandem_Repeat	947076	947207	52	+	.	.
scaffold1301	subtractBed	intrn	955591	956124	.	+	.	Parent=CGI_10027751;
	scaffold1301	WUBlastX	LINE_RTE-X	955591	956124	138	+	.	.
scaffold1301	subtractBed	intrn	958126	959520	.	+	.	Parent=CGI_10027751;
	scaffold1301	WUBlastX	DNA_TcMar-Pogo	958126	959520	528	+	.	.
scaffold1301	subtractBed	intrn	955501	956004	.	+	.	Parent=CGI_10027751;
	scaffold1301	WUBlastX	LINE_RTE-X	955501	956004	83	+	.	.
scaffold1301	subtractBed	intrn	958039	958431	.	+	.	Parent=CGI_10027751;
	scaffold1301	WUBlastX	DNA_TcMar-Tigge	958039	958431	61	+	.	.
scaffold1301	subtractBed	intrn	1014472	1014534	.	-	.	Parent=CGI_10027756;
	scaffold1301	TRF	Tandem_Repeat	1014472	1014534	103	+	.	.
scaffold1301	subtractBed	intrn	1064291	1064886	.	-	.	Parent=CGI_10027758;
	scaffold1301	TRF	Tandem_Repeat	1064291	1064886	711	+	.	.
scaffold1301	subtractBed	intrn	1068159	1068188	.	-	.	Parent=CGI_10027758;
	scaffold1301	TRF	Tandem_Repeat	1068159	1068188	60	+	.	.
scaffold1301	subtractBed	intrn	1090736	1090826	.	-	.	Parent=CGI_10027758;
	scaffold1301	TRF	Tandem_Repeat	1090736	1090826	94	+	.	.
scaffold1301	subtractBed	intrn	1179237	1179509	.	+	.	Parent=CGI_10027764;
	scaffold1301	TRF	Tandem_Repeat	1179237	1179509	501	+	.	.
scaffold1301	subtractBed	intrn	1239440	1239795	.	+	.	Parent=CGI_10027767;
	scaffold1301	TRF	Tandem_Repeat	1239440	1239795	329	+	.	.
scaffold1301	subtractBed	intrn	1244540	1244743	.	-	.	Parent=CGI_10027768;
	scaffold1301	WUBlastX	LINE_RTE-X	1244540	1244743	22	+	.	.
scaffold1301	subtractBed	intrn	1244633	1244743	.	-	.	Parent=CGI_10027768;
	scaffold1301	WUBlastX	LINE_RTE-X	1244633	1244743	24	+	.	.
scaffold1301	subtractBed	intrn	1244784	1244984	.	-	.	Parent=CGI_10027768;
	scaffold1301	WUBlastX	LINE_RTE-X	1244784	1244984	51	+	.	.
scaffold1301	subtractBed	intrn	1244784	1245041	.	-	.	Parent=CGI_10027768;
	scaffold1301	WUBlastX	LINE_RTE-X	1244784	1245041	33	+	.	.
scaffold1301	subtractBed	intrn	1244766	1244945	.	-	.	Parent=CGI_10027768;
	scaffold1301	WUBlastX	LINE_RTE-X	1244766	1244945	60	+	.	.
scaffold1301	subtractBed	intrn	1246042	1247460	.	-	.	Parent=CGI_10027768;
	scaffold1301	TRF	Tandem_Repeat	1246042	1247460	2015	+	.	.
scaffold1301	subtractBed	intrn	1249626	1249683	.	-	.	Parent=CGI_10027768;
	scaffold1301	TRF	Tandem_Repeat	1249626	1249683	98	+	.	.
scaffold1301	subtractBed	intrn	1250427	1250696	.	-	.	Parent=CGI_10027768;
	scaffold1301	TRF	Tandem_Repeat	1250427	1250696	438	+	.	.
scaffold1301	subtractBed	intrn	1258491	1258562	.	-	.	Parent=CGI_10027768;
	scaffold1301	TRF	Tandem_Repeat	1258491	1258562	99	+	.	.
scaffold1301	subtractBed	intrn	1258816	1259221	.	-	.	Parent=CGI_10027768;
	scaffold1301	TRF	Tandem_Repeat	1258816	1259221	231	+	.	.
scaffold1301	subtractBed	intrn	1281487	1281533	.	-	.	Parent=CGI_10027770;
	scaffold1301	TRF	Tandem_Repeat	1281487	1281533	94	+	.	.
scaffold1301	subtractBed	intrn	1287927	1287971	.	-	.	Parent=CGI_10027770;
	scaffold1301	TRF	Tandem_Repeat	1287927	1287971	90	+	.	.
scaffold1301	subtractBed	intrn	1370702	1370730	.	-	.	Parent=CGI_10027774;
	scaffold1301	TRF	Tandem_Repeat	1370702	1370730	58	+	.	.
scaffold1301	subtractBed	intrn	1402053	1402093	.	-	.	Parent=CGI_10027777;
	scaffold1301	TRF	Tandem_Repeat	1402053	1402093	55	+	.	.
scaffold1304	subtractBed	intrn	31062	31323	.	+	.	Parent=CGI_10003862;
	scaffold1304	TRF	Tandem_Repeat	31062	31323	226	+	.	.
scaffold1304	subtractBed	intrn	31695	31904	.	+	.	Parent=CGI_10003862;
	scaffold1304	WUBlastX	LINE_L1	31695	31904	39	-	.	.
scaffold1304	subtractBed	intrn	39140	39226	.	-	.	Parent=CGI_10003863;
	scaffold1304	TRF	Tandem_Repeat	39140	39226	65	+	.	.
scaffold1304	subtractBed	intrn	39388	39475	.	-	.	Parent=CGI_10003863;
	scaffold1304	TRF	Tandem_Repeat	39388	39475	50	+	.	.
scaffold1304	subtractBed	intrn	48378	48430	.	+	.	Parent=CGI_10003864;
	scaffold1304	TRF	Tandem_Repeat	48378	48430	90	+	.	.
scaffold1304	subtractBed	intrn	69976	70029	.	-	.	Parent=CGI_10003866;
	scaffold1304	TRF	Tandem_Repeat	69976	70029	108	+	.	.
scaffold1304	subtractBed	intrn	74392	74422	.	-	.	Parent=CGI_10003866;
	scaffold1304	TRF	Tandem_Repeat	74392	74422	62	+	.	.
scaffold1304	subtractBed	intrn	74420	74517	.	-	.	Parent=CGI_10003866;
	scaffold1304	TRF	Tandem_Repeat	74420	74517	160	+	.	.
scaffold1307	subtractBed	intrn	9655	10338	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	DNA_IS4EU	9655	10338	353	+	.	.
scaffold1307	subtractBed	intrn	10951	11217	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	DNA_IS4EU	10951	11217	169	+	.	.
scaffold1307	subtractBed	intrn	11612	11806	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	DNA_IS4EU	11612	11806	31	-	.	.
scaffold1307	subtractBed	intrn	11163	11291	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	DNA_IS4EU	11163	11291	31	+	.	.
scaffold1307	subtractBed	intrn	9310	10338	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	DNA_Kolobok-IS4	9310	10338	250	+	.	.
scaffold1307	subtractBed	intrn	18320	18478	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	LINE_RTE-X	18320	18478	23	-	.	.
scaffold1307	subtractBed	intrn	18069	18356	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	LINE_RTE-X	18069	18356	93	-	.	.
scaffold1307	subtractBed	intrn	18087	18407	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	LINE_RTE-X	18087	18407	49	-	.	.
scaffold1307	subtractBed	intrn	17943	18389	.	+	.	Parent=CGI_10023739;
	scaffold1307	WUBlastX	LINE_RTE-X	17943	18389	28	-	.	.
scaffold1307	subtractBed	intrn	119339	119427	.	+	.	Parent=CGI_10023745;
	scaffold1307	TRF	Tandem_Repeat	119339	119427	178	+	.	.
scaffold1307	subtractBed	intrn	122860	123000	.	+	.	Parent=CGI_10023745;
	scaffold1307	TRF	Tandem_Repeat	122860	123000	99	+	.	.
scaffold1307	subtractBed	intrn	136397	136429	.	-	.	Parent=CGI_10023746;
	scaffold1307	TRF	Tandem_Repeat	136397	136429	50	+	.	.
scaffold1307	subtractBed	intrn	137638	137686	.	-	.	Parent=CGI_10023746;
	scaffold1307	TRF	Tandem_Repeat	137638	137686	71	+	.	.
scaffold1307	subtractBed	intrn	140142	140181	.	-	.	Parent=CGI_10023746;
	scaffold1307	TRF	Tandem_Repeat	140142	140704	955	+	.	.
scaffold1307	subtractBed	intrn	140970	141052	.	-	.	Parent=CGI_10023746;
	scaffold1307	TRF	Tandem_Repeat	140970	141052	123	+	.	.
scaffold1307	subtractBed	intrn	162793	163072	.	+	.	Parent=CGI_10023748;
	scaffold1307	TRF	Tandem_Repeat	162793	163072	274	+	.	.
scaffold1307	subtractBed	intrn	162855	162978	.	+	.	Parent=CGI_10023748;
	scaffold1307	TRF	Tandem_Repeat	162855	162978	88	+	.	.
scaffold1307	subtractBed	intrn	163902	163995	.	+	.	Parent=CGI_10023748;
	scaffold1307	TRF	Tandem_Repeat	163902	163995	134	+	.	.
scaffold1307	subtractBed	intrn	165512	165605	.	+	.	Parent=CGI_10023748;
	scaffold1307	TRF	Tandem_Repeat	165512	165605	152	+	.	.
scaffold1307	subtractBed	intrn	331868	332485	.	+	.	Parent=CGI_10023754;
	scaffold1307	WUBlastX	LTR_Gypsy-Cigr	331868	332917	356	+	.	.
scaffold1307	subtractBed	intrn	331469	331624	.	+	.	Parent=CGI_10023754;
	scaffold1307	WUBlastX	LTR_Gypsy	331469	331624	45	+	.	.
scaffold1307	subtractBed	intrn	330696	331520	.	+	.	Parent=CGI_10023754;
	scaffold1307	WUBlastX	LTR_Gypsy	330696	331520	483	+	.	.
scaffold1307	subtractBed	intrn	331562	332485	.	+	.	Parent=CGI_10023754;
	scaffold1307	WUBlastX	LTR_Gypsy	331562	332701	1111	+	.	.
scaffold1307	subtractBed	intrn	406126	406910	.	-	.	Parent=CGI_10023758;
	scaffold1307	TRF	Tandem_Repeat	406124	406910	1259	+	.	.
scaffold1307	subtractBed	intrn	416375	416511	.	-	.	Parent=CGI_10023758;
	scaffold1307	TRF	Tandem_Repeat	416375	416511	118	+	.	.
scaffold1307	subtractBed	intrn	416375	416511	.	-	.	Parent=CGI_10023758;
	scaffold1307	TRF	Tandem_Repeat	416375	416511	97	+	.	.
scaffold1307	subtractBed	intrn	421018	421044	.	-	.	Parent=CGI_10023758;
	scaffold1307	TRF	Tandem_Repeat	421018	421044	54	+	.	.
scaffold1307	subtractBed	intrn	458420	458935	.	-	.	Parent=CGI_10023761;
	scaffold1307	WUBlastX	DNA_TcMar-Tc1	458420	458935	138	-	.	.
scaffold1307	subtractBed	intrn	471697	472312	.	-	.	Parent=CGI_10023763;
	scaffold1307	TRF	Tandem_Repeat	471697	472312	1126	+	.	.
scaffold1307	subtractBed	intrn	493736	493784	.	+	.	Parent=CGI_10023764;
	scaffold1307	TRF	Tandem_Repeat	493736	493784	98	+	.	.
scaffold1307	subtractBed	intrn	495475	495500	.	+	.	Parent=CGI_10023764;
	scaffold1307	TRF	Tandem_Repeat	495475	495500	52	+	.	.
scaffold1307	subtractBed	intrn	511930	511972	.	-	.	Parent=CGI_10023765;
	scaffold1307	TRF	Tandem_Repeat	511930	511972	86	+	.	.
scaffold1307	subtractBed	intrn	519828	519981	.	-	.	Parent=CGI_10023765;
	scaffold1307	TRF	Tandem_Repeat	519828	519996	126	+	.	.
scaffold1307	subtractBed	intrn	524271	524563	.	-	.	Parent=CGI_10023765;
	scaffold1307	TRF	Tandem_Repeat	524271	524563	435	+	.	.
scaffold1307	subtractBed	intrn	532218	532280	.	-	.	Parent=CGI_10023767;
	scaffold1307	TRF	Tandem_Repeat	532218	532280	126	+	.	.
scaffold1307	subtractBed	intrn	549362	550819	.	-	.	Parent=CGI_10023767;
	scaffold1307	TRF	Tandem_Repeat	549362	550819	2281	+	.	.
scaffold1307	subtractBed	intrn	549362	550819	.	-	.	Parent=CGI_10023767;
	scaffold1307	TRF	Tandem_Repeat	549362	550819	2320	+	.	.
scaffold1307	subtractBed	intrn	550850	550909	.	-	.	Parent=CGI_10023767;
	scaffold1307	TRF	Tandem_Repeat	550850	550909	84	+	.	.
scaffold1307	subtractBed	intrn	589121	589158	.	+	.	Parent=CGI_10023769;
	scaffold1307	TRF	Tandem_Repeat	589121	589158	76	+	.	.
scaffold1307	subtractBed	intrn	594544	595954	.	+	.	Parent=CGI_10023769;
	scaffold1307	TRF	Tandem_Repeat	594544	595954	2056	+	.	.
scaffold1307	subtractBed	intrn	596033	596261	.	+	.	Parent=CGI_10023769;
	scaffold1307	TRF	Tandem_Repeat	596033	596261	133	+	.	.
scaffold1307	subtractBed	intrn	592125	592307	.	+	.	Parent=CGI_10023769;
	scaffold1307	WUBlastX	LTR_Gypsy	592125	592307	94	+	.	.
scaffold1307	subtractBed	intrn	592071	592307	.	+	.	Parent=CGI_10023769;
	scaffold1307	WUBlastX	LTR_Gypsy	592071	592307	83	+	.	.
scaffold1307	subtractBed	intrn	592391	592444	.	+	.	Parent=CGI_10023769;
	scaffold1307	WUBlastX	LTR_Gypsy	592391	592444	22	+	.	.
scaffold1307	subtractBed	intrn	592107	592385	.	+	.	Parent=CGI_10023769;
	scaffold1307	WUBlastX	LTR_Gypsy	592107	592385	67	+	.	.
scaffold1307	subtractBed	intrn	600488	600551	.	+	.	Parent=CGI_10023770;
	scaffold1307	TRF	Tandem_Repeat	600488	600551	103	+	.	.
scaffold1307	subtractBed	intrn	601643	601677	.	+	.	Parent=CGI_10023770;
	scaffold1307	TRF	Tandem_Repeat	601643	601677	70	+	.	.
scaffold1307	subtractBed	intrn	602217	602270	.	+	.	Parent=CGI_10023770;
	scaffold1307	TRF	Tandem_Repeat	602217	602270	108	+	.	.
scaffold1307	subtractBed	intrn	621930	622861	.	-	.	Parent=CGI_10023774;
	scaffold1307	TRF	Tandem_Repeat	621930	622861	1047	+	.	.
scaffold1307	subtractBed	intrn	629897	630108	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	629897	630145	471	+	.	.
scaffold1307	subtractBed	intrn	631695	633196	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	631695	633196	2314	+	.	.
scaffold1307	subtractBed	intrn	631695	633196	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	631695	633196	2337	+	.	.
scaffold1307	subtractBed	intrn	634173	634424	.	-	.	Parent=CGI_10023775;
	scaffold1307	WUBlastX	DNA_hAT-Blackja	634173	634424	66	-	.	.
scaffold1307	subtractBed	intrn	639084	639143	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	639084	639143	120	+	.	.
scaffold1307	subtractBed	intrn	639141	639179	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	639141	639179	53	+	.	.
scaffold1307	subtractBed	intrn	639443	639482	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	639443	639482	80	+	.	.
scaffold1307	subtractBed	intrn	639955	640002	.	-	.	Parent=CGI_10023775;
	scaffold1307	TRF	Tandem_Repeat	639955	640002	96	+	.	.
scaffold1307	subtractBed	intrn	647625	647962	.	+	.	Parent=CGI_10023776;
	scaffold1307	TRF	Tandem_Repeat	647625	647962	359	+	.	.
scaffold1307	subtractBed	intrn	652803	653060	.	+	.	Parent=CGI_10023776;
	scaffold1307	TRF	Tandem_Repeat	652803	653060	293	+	.	.
scaffold1307	subtractBed	intrn	678449	678701	.	+	.	Parent=CGI_10023781;
	scaffold1307	TRF	Tandem_Repeat	678449	678701	158	+	.	.
scaffold1307	subtractBed	intrn	678721	678897	.	+	.	Parent=CGI_10023781;
	scaffold1307	TRF	Tandem_Repeat	678721	678897	216	+	.	.
scaffold1314	subtractBed	intrn	22146	22199	.	+	.	Parent=CGI_10009302;
	scaffold1314	TRF	Tandem_Repeat	22146	22199	101	+	.	.
scaffold1314	subtractBed	intrn	24488	25030	.	+	.	Parent=CGI_10009303;
	scaffold1314	WUBlastX	DNA_Sola	24488	25030	42	+	.	.
scaffold1314	subtractBed	intrn	24317	25072	.	+	.	Parent=CGI_10009303;
	scaffold1314	WUBlastX	DNA_Sola	24317	25072	22	+	.	.
scaffold1314	subtractBed	intrn	25526	25608	.	+	.	Parent=CGI_10009303;
	scaffold1314	WUBlastX	DNA_Sola	25258	25608	48	+	.	.
scaffold1314	subtractBed	intrn	109932	109995	.	+	.	Parent=CGI_10009306;
	scaffold1314	TRF	Tandem_Repeat	109932	109995	56	+	.	.
scaffold1314	subtractBed	intrn	117291	117338	.	+	.	Parent=CGI_10009306;
	scaffold1314	TRF	Tandem_Repeat	117291	117338	96	+	.	.
scaffold1314	subtractBed	intrn	184155	184192	.	-	.	Parent=CGI_10009309;
	scaffold1314	TRF	Tandem_Repeat	184155	184192	76	+	.	.
scaffold1314	subtractBed	intrn	187253	187343	.	-	.	Parent=CGI_10009309;
	scaffold1314	TRF	Tandem_Repeat	187253	187343	87	+	.	.
scaffold1314	subtractBed	intrn	187579	187628	.	-	.	Parent=CGI_10009309;
	scaffold1314	TRF	Tandem_Repeat	187579	187628	100	+	.	.
scaffold1314	subtractBed	intrn	187806	187831	.	-	.	Parent=CGI_10009309;
	scaffold1314	TRF	Tandem_Repeat	187806	187831	52	+	.	.
scaffold1314	subtractBed	intrn	188896	188966	.	-	.	Parent=CGI_10009309;
	scaffold1314	TRF	Tandem_Repeat	188896	188966	67	+	.	.
scaffold1314	subtractBed	intrn	184979	185398	.	-	.	Parent=CGI_10009309;
	scaffold1314	WUBlastX	LINE_Penelope	184979	185398	69	+	.	.
scaffold1315	subtractBed	intrn	28230	28406	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1	28230	28406	28	+	.	.
scaffold1315	subtractBed	intrn	28179	28421	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1-Tx1	28179	28421	23	+	.	.
scaffold1315	subtractBed	intrn	26974	27405	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1-Tx1	26974	27405	49	+	.	.
scaffold1315	subtractBed	intrn	28433	28840	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1-Tx1	28433	28840	34	+	.	.
scaffold1315	subtractBed	intrn	28275	28415	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1	28275	28415	33	+	.	.
scaffold1315	subtractBed	intrn	28430	28687	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	LINE_L1-Tx1	28430	28687	65	+	.	.
scaffold1315	subtractBed	intrn	30689	30689	.	+	.	Parent=CGI_10021591;
	scaffold1315	WUBlastX	DNA_Sola	30522	30689	81	+	.	.
scaffold1315	subtractBed	intrn	34483	34528	.	-	.	Parent=CGI_10021592;
	scaffold1315	TRF	Tandem_Repeat	34483	34528	92	+	.	.
scaffold1315	subtractBed	intrn	111203	111670	.	+	.	Parent=CGI_10021597;
	scaffold1315	TRF	Tandem_Repeat	111203	111670	268	+	.	.
scaffold1315	subtractBed	intrn	197136	197400	.	+	.	Parent=CGI_10021607;
	scaffold1315	TRF	Tandem_Repeat	197136	197400	458	+	.	.
scaffold1315	subtractBed	intrn	197136	197400	.	-	.	Parent=CGI_10021608;
	scaffold1315	TRF	Tandem_Repeat	197136	197400	458	+	.	.
scaffold1315	subtractBed	intrn	352647	352707	.	-	.	Parent=CGI_10021618;
	scaffold1315	TRF	Tandem_Repeat	352647	352707	104	+	.	.
scaffold1315	subtractBed	intrn	448539	448586	.	-	.	Parent=CGI_10021620;
	scaffold1315	TRF	Tandem_Repeat	448539	448586	96	+	.	.
scaffold1315	subtractBed	intrn	471642	471694	.	+	.	Parent=CGI_10021621;
	scaffold1315	TRF	Tandem_Repeat	471642	471694	106	+	.	.
scaffold1315	subtractBed	intrn	525705	526049	.	+	.	Parent=CGI_10021623;
	scaffold1315	WUBlastX	LINE_RTE-X	525705	526049	86	+	.	.
scaffold1315	subtractBed	intrn	549408	549446	.	-	.	Parent=CGI_10021624;
	scaffold1315	TRF	Tandem_Repeat	549408	549446	51	+	.	.
scaffold1315	subtractBed	intrn	689035	689535	.	-	.	Parent=CGI_10021627;
	scaffold1315	WUBlastX	LINE_Penelope	689035	689535	21	-	.	.
scaffold1315	subtractBed	intrn	688683	689276	.	-	.	Parent=CGI_10021627;
	scaffold1315	WUBlastX	LINE_Penelope	688683	689276	61	-	.	.
scaffold1315	subtractBed	intrn	689371	689628	.	-	.	Parent=CGI_10021627;
	scaffold1315	WUBlastX	LINE_Penelope	689371	689628	51	-	.	.
scaffold1315	subtractBed	intrn	688722	689033	.	-	.	Parent=CGI_10021627;
	scaffold1315	WUBlastX	LINE_Penelope	688722	689033	63	-	.	.
scaffold1315	subtractBed	intrn	693238	693501	.	-	.	Parent=CGI_10021627;
	scaffold1315	TRF	Tandem_Repeat	693238	693501	168	+	.	.
scaffold1316	subtractBed	intrn	33351	33432	.	+	.	Parent=CGI_10016292;
	scaffold1316	TRF	Tandem_Repeat	33351	33432	101	+	.	.
scaffold1316	subtractBed	intrn	33348	33432	.	+	.	Parent=CGI_10016292;
	scaffold1316	TRF	Tandem_Repeat	33348	33432	71	+	.	.
scaffold1316	subtractBed	intrn	41444	41482	.	+	.	Parent=CGI_10016292;
	scaffold1316	TRF	Tandem_Repeat	41444	41482	78	+	.	.
scaffold1316	subtractBed	intrn	41576	41619	.	+	.	Parent=CGI_10016292;
	scaffold1316	TRF	Tandem_Repeat	41576	41619	88	+	.	.
scaffold1316	subtractBed	intrn	47030	47082	.	+	.	Parent=CGI_10016292;
	scaffold1316	TRF	Tandem_Repeat	47030	47082	97	+	.	.
scaffold1316	subtractBed	intrn	115403	115460	.	+	.	Parent=CGI_10016297;
	scaffold1316	TRF	Tandem_Repeat	115403	115460	116	+	.	.
scaffold1316	subtractBed	intrn	194040	194066	.	-	.	Parent=CGI_10016299;
	scaffold1316	TRF	Tandem_Repeat	194040	194066	54	+	.	.
scaffold1316	subtractBed	intrn	207617	207662	.	+	.	Parent=CGI_10016302;
	scaffold1316	TRF	Tandem_Repeat	207617	207662	92	+	.	.
scaffold1316	subtractBed	intrn	207668	207701	.	+	.	Parent=CGI_10016302;
	scaffold1316	TRF	Tandem_Repeat	207668	207701	59	+	.	.
scaffold1316	subtractBed	intrn	260650	260856	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_ERV1	260650	260856	66	+	.	.
scaffold1316	subtractBed	intrn	260056	260538	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_Gypsy	260011	260538	59	+	.	.
scaffold1316	subtractBed	intrn	260098	260823	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_Gypsy-Cigr	260098	260823	186	+	.	.
scaffold1316	subtractBed	intrn	260887	260946	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_Copia	260887	261159	44	+	.	.
scaffold1316	subtractBed	intrn	260596	260916	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_Gypsy	260596	260916	57	+	.	.
scaffold1316	subtractBed	intrn	260830	260946	.	+	.	Parent=CGI_10016306;
	scaffold1316	WUBlastX	LTR_Copia	260830	261228	31	+	.	.
scaffold1316	subtractBed	intrn	343901	343936	.	+	.	Parent=CGI_10016310;
	scaffold1316	TRF	Tandem_Repeat	343901	343936	72	+	.	.
scaffold1316	subtractBed	intrn	348932	348980	.	+	.	Parent=CGI_10016310;
	scaffold1316	TRF	Tandem_Repeat	348932	348980	98	+	.	.
scaffold1316	subtractBed	intrn	369801	370202	.	-	.	Parent=CGI_10016312;
	scaffold1316	WUBlastX	LINE_L1-Tx1	369801	370202	135	-	.	.
scaffold1316	subtractBed	intrn	369654	370151	.	-	.	Parent=CGI_10016312;
	scaffold1316	WUBlastX	LINE_L1-Tx1	369654	370151	91	-	.	.
scaffold1316	subtractBed	intrn	370211	370771	.	-	.	Parent=CGI_10016312;
	scaffold1316	WUBlastX	LINE_L1-Tx1	370211	370771	57	-	.	.
scaffold1316	subtractBed	intrn	380116	380162	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	380116	380162	76	+	.	.
scaffold1316	subtractBed	intrn	380207	380245	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	380207	380245	78	+	.	.
scaffold1316	subtractBed	intrn	380325	380380	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	380325	380380	112	+	.	.
scaffold1316	subtractBed	intrn	385015	385054	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	385015	385054	80	+	.	.
scaffold1316	subtractBed	intrn	385304	385400	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	385304	385400	178	+	.	.
scaffold1316	subtractBed	intrn	388347	388400	.	-	.	Parent=CGI_10016312;
	scaffold1316	TRF	Tandem_Repeat	388347	388400	90	+	.	.
scaffold1316	subtractBed	intrn	428970	429009	.	-	.	Parent=CGI_10016315;
	scaffold1316	TRF	Tandem_Repeat	428970	429009	80	+	.	.
scaffold1316	subtractBed	intrn	429210	429251	.	-	.	Parent=CGI_10016315;
	scaffold1316	TRF	Tandem_Repeat	429210	429251	84	+	.	.
scaffold1317	subtractBed	intrn	12422	12475	.	-	.	Parent=CGI_10006053;
	scaffold1317	TRF	Tandem_Repeat	12422	12475	108	+	.	.
scaffold1317	subtractBed	intrn	13362	13999	.	-	.	Parent=CGI_10006053;
	scaffold1317	TRF	Tandem_Repeat	13362	13999	956	+	.	.
scaffold1317	subtractBed	intrn	17308	17795	.	-	.	Parent=CGI_10006053;
	scaffold1317	TRF	Tandem_Repeat	17308	17808	356	+	.	.
scaffold1317	subtractBed	intrn	17308	17765	.	-	.	Parent=CGI_10006053;
	scaffold1317	TRF	Tandem_Repeat	17308	17765	647	+	.	.
scaffold1317	subtractBed	intrn	41036	41126	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	41036	41126	146	+	.	.
scaffold1317	subtractBed	intrn	41092	41181	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	41092	41181	99	+	.	.
scaffold1317	subtractBed	intrn	42667	42773	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	42667	42773	142	+	.	.
scaffold1317	subtractBed	intrn	43464	43490	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	43464	43490	54	+	.	.
scaffold1317	subtractBed	intrn	43929	43974	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	43929	43974	92	+	.	.
scaffold1317	subtractBed	intrn	47354	47409	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	47354	47409	87	+	.	.
scaffold1317	subtractBed	intrn	47671	47706	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	47671	47706	63	+	.	.
scaffold1317	subtractBed	intrn	48100	48125	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	48100	48125	52	+	.	.
scaffold1317	subtractBed	intrn	48601	48625	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	48601	48625	50	+	.	.
scaffold1317	subtractBed	intrn	48776	48820	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	48776	48820	90	+	.	.
scaffold1317	subtractBed	intrn	48938	48979	.	+	.	Parent=CGI_10006054;
	scaffold1317	TRF	Tandem_Repeat	48938	48979	75	+	.	.
scaffold1317	subtractBed	intrn	116259	116348	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	116259	116348	117	+	.	.
scaffold1317	subtractBed	intrn	117722	117809	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	117722	117809	95	+	.	.
scaffold1317	subtractBed	intrn	125375	125405	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	125375	125405	53	+	.	.
scaffold1317	subtractBed	intrn	129904	130046	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	129889	130046	316	+	.	.
scaffold1317	subtractBed	intrn	133007	133248	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	133007	133248	346	+	.	.
scaffold1317	subtractBed	intrn	134448	134541	.	+	.	Parent=CGI_10006057;
	scaffold1317	TRF	Tandem_Repeat	134448	134541	87	+	.	.
scaffold1318	subtractBed	intrn	48151	48738	.	+	.	Parent=CGI_10008644;
	scaffold1318	WUBlastX	DNA_TcMar-Tc1	48151	48738	81	+	.	.
scaffold1318	subtractBed	intrn	48147	48585	.	+	.	Parent=CGI_10008644;
	scaffold1318	WUBlastX	DNA_TcMar-Tc1	48130	48585	205	+	.	.
scaffold1318	subtractBed	intrn	48585	48773	.	+	.	Parent=CGI_10008644;
	scaffold1318	WUBlastX	DNA_TcMar-Tc1	48585	48773	72	+	.	.
scaffold1318	subtractBed	intrn	73040	73097	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	73040	73097	66	+	.	.
scaffold1318	subtractBed	intrn	73042	73093	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	73042	73093	63	+	.	.
scaffold1318	subtractBed	intrn	80689	80755	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	80689	80755	71	+	.	.
scaffold1318	subtractBed	intrn	83117	83153	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	83117	83153	74	+	.	.
scaffold1318	subtractBed	intrn	90020	90069	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	90020	90069	100	+	.	.
scaffold1318	subtractBed	intrn	91530	91570	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	91530	91570	82	+	.	.
scaffold1318	subtractBed	intrn	91644	91685	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	91644	91685	66	+	.	.
scaffold1318	subtractBed	intrn	93593	94522	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	93593	94522	1065	+	.	.
scaffold1318	subtractBed	intrn	93593	94522	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	93593	94522	1179	+	.	.
scaffold1318	subtractBed	intrn	93614	94522	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	93614	94522	1135	+	.	.
scaffold1318	subtractBed	intrn	94733	94780	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	94733	94780	78	+	.	.
scaffold1318	subtractBed	intrn	95068	95106	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	95068	95106	78	+	.	.
scaffold1318	subtractBed	intrn	95508	95548	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	95508	95548	82	+	.	.
scaffold1318	subtractBed	intrn	95878	95939	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	95878	95939	115	+	.	.
scaffold1318	subtractBed	intrn	96248	96289	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	96248	96289	68	+	.	.
scaffold1318	subtractBed	intrn	96753	96803	.	+	.	Parent=CGI_10008645;
	scaffold1318	TRF	Tandem_Repeat	96753	96803	102	+	.	.
scaffold1318	subtractBed	intrn	137870	137897	.	+	.	Parent=CGI_10008647;
	scaffold1318	TRF	Tandem_Repeat	137870	137897	56	+	.	.
scaffold1318	subtractBed	intrn	137897	137942	.	+	.	Parent=CGI_10008647;
	scaffold1318	TRF	Tandem_Repeat	137897	137942	92	+	.	.
scaffold1321	subtractBed	intrn	32045	32145	.	-	.	Parent=CGI_10010658;
	scaffold1321	TRF	Tandem_Repeat	32045	32145	166	+	.	.
scaffold1321	subtractBed	intrn	32045	32145	.	-	.	Parent=CGI_10010658;
	scaffold1321	TRF	Tandem_Repeat	32045	32145	177	+	.	.
scaffold1321	subtractBed	intrn	32211	32266	.	-	.	Parent=CGI_10010658;
	scaffold1321	TRF	Tandem_Repeat	32211	32266	51	+	.	.
scaffold1321	subtractBed	intrn	33531	33593	.	-	.	Parent=CGI_10010658;
	scaffold1321	TRF	Tandem_Repeat	33531	33593	108	+	.	.
scaffold1321	subtractBed	intrn	50140	50184	.	-	.	Parent=CGI_10010658;
	scaffold1321	TRF	Tandem_Repeat	50140	50184	58	+	.	.
scaffold1321	subtractBed	intrn	32045	32145	.	+	.	Parent=CGI_10010659;
	scaffold1321	TRF	Tandem_Repeat	32045	32145	166	+	.	.
scaffold1321	subtractBed	intrn	32045	32145	.	+	.	Parent=CGI_10010659;
	scaffold1321	TRF	Tandem_Repeat	32045	32145	177	+	.	.
scaffold1321	subtractBed	intrn	32211	32266	.	+	.	Parent=CGI_10010659;
	scaffold1321	TRF	Tandem_Repeat	32211	32266	51	+	.	.
scaffold1321	subtractBed	intrn	33531	33593	.	+	.	Parent=CGI_10010659;
	scaffold1321	TRF	Tandem_Repeat	33531	33593	108	+	.	.
scaffold1321	subtractBed	intrn	125090	125093	.	-	.	Parent=CGI_10010661;
	scaffold1321	WUBlastX	DNA_Harbinger	124920	125093	56	-	.	.
scaffold1321	subtractBed	intrn	129490	129791	.	-	.	Parent=CGI_10010661;
	scaffold1321	WUBlastX	LTR_Gypsy	129490	129996	25	-	.	.
scaffold1321	subtractBed	intrn	151229	151262	.	+	.	Parent=CGI_10010664;
	scaffold1321	TRF	Tandem_Repeat	151229	151262	68	+	.	.
scaffold1321	subtractBed	intrn	152001	152074	.	+	.	Parent=CGI_10010664;
	scaffold1321	TRF	Tandem_Repeat	152001	152074	51	+	.	.
scaffold1321	subtractBed	intrn	151918	152104	.	+	.	Parent=CGI_10010664;
	scaffold1321	TRF	Tandem_Repeat	151918	152104	141	+	.	.
scaffold1321	subtractBed	intrn	155253	155403	.	+	.	Parent=CGI_10010664;
	scaffold1321	TRF	Tandem_Repeat	155253	155403	126	+	.	.
scaffold1321	subtractBed	intrn	160975	161472	.	+	.	Parent=CGI_10010664;
	scaffold1321	WUBlastX	LTR_Gypsy	160975	161472	161	-	.	.
scaffold1321	subtractBed	intrn	160312	161376	.	+	.	Parent=CGI_10010664;
	scaffold1321	WUBlastX	LTR_Gypsy	160312	161376	736	-	.	.
scaffold1321	subtractBed	intrn	160285	160395	.	+	.	Parent=CGI_10010664;
	scaffold1321	WUBlastX	LTR_Gypsy	160285	160395	32	-	.	.
scaffold1321	subtractBed	intrn	161592	161657	.	+	.	Parent=CGI_10010664;
	scaffold1321	WUBlastX	LTR_Gypsy	161592	161657	34	-	.	.
scaffold1322	subtractBed	intrn	11441	11495	.	-	.	Parent=CGI_10019460;
	scaffold1322	TRF	Tandem_Repeat	11441	11495	110	+	.	.
scaffold1322	subtractBed	intrn	71604	71764	.	+	.	Parent=CGI_10019462;
	scaffold1322	TRF	Tandem_Repeat	71604	71764	234	+	.	.
scaffold1322	subtractBed	intrn	71634	71737	.	+	.	Parent=CGI_10019462;
	scaffold1322	TRF	Tandem_Repeat	71634	71737	51	+	.	.
scaffold1322	subtractBed	intrn	175262	175297	.	+	.	Parent=CGI_10019465;
	scaffold1322	TRF	Tandem_Repeat	175262	175297	63	+	.	.
scaffold1322	subtractBed	intrn	175365	175417	.	+	.	Parent=CGI_10019465;
	scaffold1322	TRF	Tandem_Repeat	175365	175417	61	+	.	.
scaffold1322	subtractBed	intrn	175740	175772	.	+	.	Parent=CGI_10019465;
	scaffold1322	TRF	Tandem_Repeat	175740	175772	66	+	.	.
scaffold1322	subtractBed	intrn	175764	175907	.	+	.	Parent=CGI_10019465;
	scaffold1322	TRF	Tandem_Repeat	175764	175907	93	+	.	.
scaffold1322	subtractBed	intrn	175774	175904	.	+	.	Parent=CGI_10019465;
	scaffold1322	TRF	Tandem_Repeat	175774	175904	79	+	.	.
scaffold1322	subtractBed	intrn	195180	195335	.	+	.	Parent=CGI_10019467;
	scaffold1322	WUBlastX	LINE_RTE-X	195180	195335	48	-	.	.
scaffold1322	subtractBed	intrn	212916	212961	.	-	.	Parent=CGI_10019470;
	scaffold1322	TRF	Tandem_Repeat	212916	212961	92	+	.	.
scaffold1322	subtractBed	intrn	270360	270824	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Gypsy	270360	270824	123	+	.	.
scaffold1322	subtractBed	intrn	269916	270824	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Gypsy	269916	270824	47	+	.	.
scaffold1322	subtractBed	intrn	270078	270824	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Gypsy	270078	270824	76	+	.	.
scaffold1322	subtractBed	intrn	270294	270842	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Gypsy-Cigr	270294	270842	120	+	.	.
scaffold1322	subtractBed	intrn	267480	267776	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LINE_RTE-X	267480	267776	23	-	.	.
scaffold1322	subtractBed	intrn	267513	267695	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LINE_RTE-X	267513	267695	30	-	.	.
scaffold1322	subtractBed	intrn	280893	281852	.	+	.	Parent=CGI_10019472;
	scaffold1322	TRF	Tandem_Repeat	280893	281852	1385	+	.	.
scaffold1322	subtractBed	intrn	285353	285392	.	+	.	Parent=CGI_10019472;
	scaffold1322	TRF	Tandem_Repeat	285353	285392	52	+	.	.
scaffold1322	subtractBed	intrn	285400	286200	.	+	.	Parent=CGI_10019472;
	scaffold1322	TRF	Tandem_Repeat	285400	286200	1039	+	.	.
scaffold1322	subtractBed	intrn	290781	291145	.	+	.	Parent=CGI_10019472;
	scaffold1322	TRF	Tandem_Repeat	290757	291145	698	+	.	.
scaffold1322	subtractBed	intrn	301264	301572	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	301264	301572	71	-	.	.
scaffold1322	subtractBed	intrn	301070	301465	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	301070	301465	97	-	.	.
scaffold1322	subtractBed	intrn	300080	300526	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	300080	300526	250	-	.	.
scaffold1322	subtractBed	intrn	301037	301159	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	301037	301159	50	-	.	.
scaffold1322	subtractBed	intrn	299932	300048	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	299932	300048	49	-	.	.
scaffold1322	subtractBed	intrn	298915	299025	.	+	.	Parent=CGI_10019472;
	scaffold1322	WUBlastX	LTR_Ngaro	298915	299025	69	-	.	.
scaffold1322	subtractBed	intrn	327454	327504	.	-	.	Parent=CGI_10019473;
	scaffold1322	TRF	Tandem_Repeat	327454	327504	95	+	.	.
scaffold1322	subtractBed	intrn	327746	327810	.	-	.	Parent=CGI_10019473;
	scaffold1322	TRF	Tandem_Repeat	327746	327810	130	+	.	.
scaffold1322	subtractBed	intrn	368649	368735	.	+	.	Parent=CGI_10019476;
	scaffold1322	WUBlastX	LINE_RTE-BovB	368649	368735	48	-	.	.
scaffold1322	subtractBed	intrn	368622	368834	.	+	.	Parent=CGI_10019476;
	scaffold1322	WUBlastX	LINE_RTE-X	368622	368834	26	-	.	.
scaffold1322	subtractBed	intrn	366937	368628	.	+	.	Parent=CGI_10019476;
	scaffold1322	WUBlastX	LINE_RTE-X	366937	368628	612	-	.	.
scaffold1322	subtractBed	intrn	368634	368750	.	+	.	Parent=CGI_10019476;
	scaffold1322	WUBlastX	LINE_RTE-X	368634	368750	46	-	.	.
scaffold1322	subtractBed	intrn	370251	370309	.	+	.	Parent=CGI_10019476;
	scaffold1322	TRF	Tandem_Repeat	370251	370309	118	+	.	.
scaffold1322	subtractBed	intrn	407979	408200	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	407979	408200	80	-	.	.
scaffold1322	subtractBed	intrn	408846	409331	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	408846	409445	36	-	.	.
scaffold1322	subtractBed	intrn	405670	408018	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	405670	408018	1394	-	.	.
scaffold1322	subtractBed	intrn	408233	408436	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	408233	408436	39	-	.	.
scaffold1322	subtractBed	intrn	408951	409178	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	408951	409178	119	-	.	.
scaffold1322	subtractBed	intrn	408242	408406	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	408242	408406	46	-	.	.
scaffold1322	subtractBed	intrn	409177	409331	.	-	.	Parent=CGI_10019477;
	scaffold1322	WUBlastX	LTR_Pao	409177	409863	91	-	.	.
scaffold1322	subtractBed	intrn	433192	433226	.	-	.	Parent=CGI_10019478;
	scaffold1322	TRF	Tandem_Repeat	433192	433226	63	+	.	.
scaffold1322	subtractBed	intrn	463490	463492	.	+	.	Parent=CGI_10019481;
	scaffold1322	WUBlastX	DNA_IS4EU	463490	463570	49	+	.	.
scaffold1322	subtractBed	intrn	533806	533834	.	+	.	Parent=CGI_10019483;
	scaffold1322	TRF	Tandem_Repeat	533806	533834	58	+	.	.
scaffold1322	subtractBed	intrn	536167	536477	.	+	.	Parent=CGI_10019483;
	scaffold1322	TRF	Tandem_Repeat	536167	536477	257	+	.	.
scaffold1322	subtractBed	intrn	536167	536452	.	+	.	Parent=CGI_10019483;
	scaffold1322	TRF	Tandem_Repeat	536167	536452	317	+	.	.
scaffold1322	subtractBed	intrn	578876	578940	.	-	.	Parent=CGI_10019486;
	scaffold1322	TRF	Tandem_Repeat	578876	578940	85	+	.	.
scaffold1322	subtractBed	intrn	587512	587613	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	587512	587613	41	-	.	.
scaffold1322	subtractBed	intrn	588850	589128	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	588850	589128	49	-	.	.
scaffold1322	subtractBed	intrn	588359	588862	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	588359	588862	189	-	.	.
scaffold1322	subtractBed	intrn	587851	588180	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	587851	588180	78	-	.	.
scaffold1322	subtractBed	intrn	588288	588494	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	588288	588494	34	-	.	.
scaffold1322	subtractBed	intrn	589444	590124	.	-	.	Parent=CGI_10019486;
	scaffold1322	WUBlastX	LTR_Ngaro	589444	590124	63	-	.	.
scaffold1323	subtractBed	intrn	14176	14210	.	+	.	Parent=CGI_10009080;
	scaffold1323	TRF	Tandem_Repeat	14176	14210	70	+	.	.
scaffold1323	subtractBed	intrn	11484	11684	.	+	.	Parent=CGI_10009080;
	scaffold1323	WUBlastX	LINE_Penelope	11484	11684	45	+	.	.
scaffold1323	subtractBed	intrn	12096	12263	.	+	.	Parent=CGI_10009080;
	scaffold1323	WUBlastX	LINE_Penelope	12096	12263	32	+	.	.
scaffold1323	subtractBed	intrn	11645	12085	.	+	.	Parent=CGI_10009080;
	scaffold1323	WUBlastX	LINE_Penelope	11645	12085	133	+	.	.
scaffold1323	subtractBed	intrn	16963	16994	.	+	.	Parent=CGI_10009080;
	scaffold1323	TRF	Tandem_Repeat	16963	16994	64	+	.	.
scaffold1323	subtractBed	intrn	25120	25218	.	+	.	Parent=CGI_10009080;
	scaffold1323	WUBlastX	DNA_Sola	24829	25218	93	-	.	.
scaffold1323	subtractBed	intrn	35642	35686	.	+	.	Parent=CGI_10009080;
	scaffold1323	TRF	Tandem_Repeat	35642	35686	90	+	.	.
scaffold1323	subtractBed	intrn	71086	71318	.	+	.	Parent=CGI_10009082;
	scaffold1323	TRF	Tandem_Repeat	71086	71318	421	+	.	.
scaffold1323	subtractBed	intrn	70380	71000	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	DNA_MuDR	70380	71000	140	-	.	.
scaffold1323	subtractBed	intrn	69790	70371	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	DNA_MuDR	69790	70371	169	-	.	.
scaffold1323	subtractBed	intrn	75690	75863	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	75690	75863	70	-	.	.
scaffold1323	subtractBed	intrn	75513	75830	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	75513	75830	37	-	.	.
scaffold1323	subtractBed	intrn	75844	76134	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	75844	76134	58	-	.	.
scaffold1323	subtractBed	intrn	78091	78486	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	78091	78486	63	-	.	.
scaffold1323	subtractBed	intrn	77597	78112	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	77597	78112	305	-	.	.
scaffold1323	subtractBed	intrn	76122	76778	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	76122	76778	207	-	.	.
scaffold1323	subtractBed	intrn	76762	76821	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_Ngaro	76762	76821	42	-	.	.
scaffold1323	subtractBed	intrn	77405	78091	.	+	.	Parent=CGI_10009082;
	scaffold1323	WUBlastX	LTR_DIRS	77405	78091	69	-	.	.
scaffold1323	subtractBed	intrn	80331	80371	.	+	.	Parent=CGI_10009082;
	scaffold1323	TRF	Tandem_Repeat	80331	80371	82	+	.	.
scaffold1323	subtractBed	intrn	83110	83151	.	+	.	Parent=CGI_10009082;
	scaffold1323	TRF	Tandem_Repeat	83110	83151	84	+	.	.
scaffold1323	subtractBed	intrn	85905	85986	.	+	.	Parent=CGI_10009082;
	scaffold1323	TRF	Tandem_Repeat	85905	85986	155	+	.	.
scaffold1323	subtractBed	intrn	87749	87804	.	+	.	Parent=CGI_10009082;
	scaffold1323	TRF	Tandem_Repeat	87749	87804	78	+	.	.
scaffold1323	subtractBed	intrn	157943	157975	.	-	.	Parent=CGI_10009087;
	scaffold1323	TRF	Tandem_Repeat	157943	157975	59	+	.	.
scaffold1323	subtractBed	intrn	167664	169436	.	-	.	Parent=CGI_10009087;
	scaffold1323	TRF	Tandem_Repeat	167664	169436	2009	+	.	.
scaffold1323	subtractBed	intrn	167664	169484	.	-	.	Parent=CGI_10009087;
	scaffold1323	TRF	Tandem_Repeat	167664	169484	2040	+	.	.
scaffold1323	subtractBed	intrn	171748	171781	.	-	.	Parent=CGI_10009087;
	scaffold1323	TRF	Tandem_Repeat	171748	171781	59	+	.	.
scaffold1323	subtractBed	intrn	193820	193917	.	-	.	Parent=CGI_10009088;
	scaffold1323	TRF	Tandem_Repeat	193820	193917	178	+	.	.
scaffold1323	subtractBed	intrn	200518	200603	.	-	.	Parent=CGI_10009088;
	scaffold1323	TRF	Tandem_Repeat	200518	200603	98	+	.	.
scaffold1323	subtractBed	intrn	200507	200586	.	-	.	Parent=CGI_10009088;
	scaffold1323	TRF	Tandem_Repeat	200507	200586	74	+	.	.
scaffold1323	subtractBed	intrn	207883	207946	.	-	.	Parent=CGI_10009088;
	scaffold1323	TRF	Tandem_Repeat	207883	207946	128	+	.	.
scaffold1323	subtractBed	intrn	220330	220354	.	-	.	Parent=CGI_10009089;
	scaffold1323	TRF	Tandem_Repeat	220330	220354	50	+	.	.
scaffold1323	subtractBed	intrn	222228	222401	.	-	.	Parent=CGI_10009089;
	scaffold1323	TRF	Tandem_Repeat	222228	222401	62	+	.	.
scaffold1323	subtractBed	intrn	222416	222863	.	-	.	Parent=CGI_10009089;
	scaffold1323	TRF	Tandem_Repeat	222416	222863	574	+	.	.
scaffold1323	subtractBed	intrn	222536	222884	.	-	.	Parent=CGI_10009089;
	scaffold1323	TRF	Tandem_Repeat	222536	222884	295	+	.	.
scaffold1324	subtractBed	intrn	16331	16384	.	-	.	Parent=CGI_10018371;
	scaffold1324	TRF	Tandem_Repeat	16331	16384	108	+	.	.
scaffold1324	subtractBed	intrn	19636	19941	.	-	.	Parent=CGI_10018371;
	scaffold1324	WUBlastX	LINE_Penelope	19636	19941	111	+	.	.
scaffold1324	subtractBed	intrn	48432	48849	.	+	.	Parent=CGI_10018375;
	scaffold1324	TRF	Tandem_Repeat	48432	48849	631	+	.	.
scaffold1324	subtractBed	intrn	62392	63111	.	+	.	Parent=CGI_10018375;
	scaffold1324	TRF	Tandem_Repeat	62392	63111	1039	+	.	.
scaffold1324	subtractBed	intrn	62403	63111	.	+	.	Parent=CGI_10018375;
	scaffold1324	TRF	Tandem_Repeat	62403	63111	1032	+	.	.
scaffold1324	subtractBed	intrn	64145	64198	.	+	.	Parent=CGI_10018375;
	scaffold1324	TRF	Tandem_Repeat	64145	64198	108	+	.	.
scaffold1324	subtractBed	intrn	65499	65525	.	+	.	Parent=CGI_10018375;
	scaffold1324	TRF	Tandem_Repeat	65499	65525	54	+	.	.
scaffold1324	subtractBed	intrn	85772	86104	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	85772	86104	422	+	.	.
scaffold1324	subtractBed	intrn	85626	86104	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	85626	86104	548	+	.	.
scaffold1324	subtractBed	intrn	88385	88658	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	88385	88658	383	+	.	.
scaffold1324	subtractBed	intrn	89278	89732	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	89278	89732	253	+	.	.
scaffold1324	subtractBed	intrn	89267	89752	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	89267	89759	611	+	.	.
scaffold1324	subtractBed	intrn	91308	91651	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	91290	91651	347	+	.	.
scaffold1324	subtractBed	intrn	93868	94988	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	93868	94988	1503	+	.	.
scaffold1324	subtractBed	intrn	93963	94096	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	93963	94096	68	+	.	.
scaffold1324	subtractBed	intrn	93990	94121	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	93990	94121	75	+	.	.
scaffold1324	subtractBed	intrn	107750	107830	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	107750	107830	162	+	.	.
scaffold1324	subtractBed	intrn	107841	107872	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	107841	107872	64	+	.	.
scaffold1324	subtractBed	intrn	107870	107896	.	+	.	Parent=CGI_10018378;
	scaffold1324	TRF	Tandem_Repeat	107870	107896	54	+	.	.
scaffold1324	subtractBed	intrn	135614	137345	.	+	.	Parent=CGI_10018381;
	scaffold1324	TRF	Tandem_Repeat	135614	137345	1732	+	.	.
scaffold1324	subtractBed	intrn	145128	145495	.	+	.	Parent=CGI_10018381;
	scaffold1324	TRF	Tandem_Repeat	145128	145495	607	+	.	.
scaffold1324	subtractBed	intrn	152153	152191	.	+	.	Parent=CGI_10018381;
	scaffold1324	TRF	Tandem_Repeat	152153	152191	78	+	.	.
scaffold1324	subtractBed	intrn	145128	145495	.	-	.	Parent=CGI_10018382;
	scaffold1324	TRF	Tandem_Repeat	145128	145495	607	+	.	.
scaffold1324	subtractBed	intrn	164658	164880	.	+	.	Parent=CGI_10018383;
	scaffold1324	TRF	Tandem_Repeat	164658	164880	331	+	.	.
scaffold1324	subtractBed	intrn	174066	174096	.	+	.	Parent=CGI_10018384;
	scaffold1324	TRF	Tandem_Repeat	174066	174096	53	+	.	.
scaffold1324	subtractBed	intrn	175898	176323	.	+	.	Parent=CGI_10018384;
	scaffold1324	TRF	Tandem_Repeat	175898	176323	640	+	.	.
scaffold1324	subtractBed	intrn	192534	192599	.	+	.	Parent=CGI_10018386;
	scaffold1324	TRF	Tandem_Repeat	192534	192599	132	+	.	.
scaffold1324	subtractBed	intrn	193174	193274	.	+	.	Parent=CGI_10018386;
	scaffold1324	TRF	Tandem_Repeat	193174	193274	139	+	.	.
scaffold1324	subtractBed	intrn	233894	234461	.	-	.	Parent=CGI_10018391;
	scaffold1324	TRF	Tandem_Repeat	233894	234513	1006	+	.	.
scaffold1324	subtractBed	intrn	235409	235492	.	-	.	Parent=CGI_10018391;
	scaffold1324	TRF	Tandem_Repeat	235409	235492	141	+	.	.
scaffold1324	subtractBed	intrn	240122	240482	.	-	.	Parent=CGI_10018391;
	scaffold1324	TRF	Tandem_Repeat	240122	240482	560	+	.	.
scaffold1324	subtractBed	intrn	246663	246719	.	-	.	Parent=CGI_10018391;
	scaffold1324	TRF	Tandem_Repeat	246663	246719	114	+	.	.
scaffold1324	subtractBed	intrn	248576	249321	.	-	.	Parent=CGI_10018391;
	scaffold1324	TRF	Tandem_Repeat	248576	249321	974	+	.	.
scaffold1324	subtractBed	intrn	314310	315364	.	-	.	Parent=CGI_10018395;
	scaffold1324	TRF	Tandem_Repeat	314310	315364	1090	+	.	.
scaffold1324	subtractBed	intrn	321393	321438	.	-	.	Parent=CGI_10018395;
	scaffold1324	TRF	Tandem_Repeat	321393	321438	92	+	.	.
scaffold1324	subtractBed	intrn	322882	322935	.	-	.	Parent=CGI_10018395;
	scaffold1324	TRF	Tandem_Repeat	322882	322935	92	+	.	.
scaffold1324	subtractBed	intrn	323866	324840	.	-	.	Parent=CGI_10018395;
	scaffold1324	WUBlastX	DNA_TcMar-Tc1	323866	324840	318	+	.	.
scaffold1324	subtractBed	intrn	523037	523132	.	-	.	Parent=CGI_10018403;
	scaffold1324	TRF	Tandem_Repeat	523037	523132	178	+	.	.
scaffold1327	subtractBed	intrn	88733	88964	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	88733	88964	401	+	.	.
scaffold1327	subtractBed	intrn	93501	93536	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	93501	93536	72	+	.	.
scaffold1327	subtractBed	intrn	94619	94831	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	94619	94831	277	+	.	.
scaffold1327	subtractBed	intrn	97307	97356	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	97307	97356	57	+	.	.
scaffold1327	subtractBed	intrn	99780	100322	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	99776	100322	713	+	.	.
scaffold1327	subtractBed	intrn	100893	101053	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	100893	101053	231	+	.	.
scaffold1327	subtractBed	intrn	103822	104027	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	103822	104027	412	+	.	.
scaffold1327	subtractBed	intrn	106441	106839	.	+	.	Parent=CGI_10014336;
	scaffold1327	TRF	Tandem_Repeat	106441	106839	629	+	.	.
scaffold1327	subtractBed	intrn	118157	118228	.	+	.	Parent=CGI_10014337;
	scaffold1327	TRF	Tandem_Repeat	118157	118228	144	+	.	.
scaffold1327	subtractBed	intrn	123320	123578	.	+	.	Parent=CGI_10014337;
	scaffold1327	TRF	Tandem_Repeat	123320	123578	284	+	.	.
scaffold1327	subtractBed	intrn	123324	123510	.	+	.	Parent=CGI_10014337;
	scaffold1327	TRF	Tandem_Repeat	123324	123510	190	+	.	.
scaffold1327	subtractBed	intrn	128229	128590	.	-	.	Parent=CGI_10014338;
	scaffold1327	TRF	Tandem_Repeat	128229	128590	393	+	.	.
scaffold1327	subtractBed	intrn	128874	128915	.	-	.	Parent=CGI_10014338;
	scaffold1327	TRF	Tandem_Repeat	128874	128915	84	+	.	.
scaffold1327	subtractBed	intrn	135470	135683	.	+	.	Parent=CGI_10014339;
	scaffold1327	TRF	Tandem_Repeat	135470	135683	198	+	.	.
scaffold1327	subtractBed	intrn	167872	167927	.	+	.	Parent=CGI_10014340;
	scaffold1327	TRF	Tandem_Repeat	167872	167927	60	+	.	.
scaffold1327	subtractBed	intrn	167873	167934	.	+	.	Parent=CGI_10014340;
	scaffold1327	TRF	Tandem_Repeat	167873	167934	63	+	.	.
scaffold1327	subtractBed	intrn	169850	169914	.	+	.	Parent=CGI_10014340;
	scaffold1327	TRF	Tandem_Repeat	169850	169914	130	+	.	.
scaffold1327	subtractBed	intrn	170794	170821	.	+	.	Parent=CGI_10014340;
	scaffold1327	TRF	Tandem_Repeat	170794	170821	56	+	.	.
scaffold1327	subtractBed	intrn	193139	193205	.	+	.	Parent=CGI_10014341;
	scaffold1327	TRF	Tandem_Repeat	193139	193205	53	+	.	.
scaffold1327	subtractBed	intrn	195643	195685	.	+	.	Parent=CGI_10014341;
	scaffold1327	TRF	Tandem_Repeat	195643	195685	86	+	.	.
scaffold1327	subtractBed	intrn	193442	193636	.	+	.	Parent=CGI_10014341;
	scaffold1327	WUBlastX	LINE_RTE-X	193442	193636	104	+	.	.
scaffold1327	subtractBed	intrn	245986	246043	.	-	.	Parent=CGI_10014344;
	scaffold1327	TRF	Tandem_Repeat	245986	246043	116	+	.	.
scaffold1327	subtractBed	intrn	273471	273600	.	-	.	Parent=CGI_10014345;
	scaffold1327	TRF	Tandem_Repeat	273471	273600	62	+	.	.
scaffold1327	subtractBed	intrn	273465	273620	.	-	.	Parent=CGI_10014345;
	scaffold1327	TRF	Tandem_Repeat	273465	273620	303	+	.	.
scaffold1327	subtractBed	intrn	278935	278960	.	-	.	Parent=CGI_10014345;
	scaffold1327	TRF	Tandem_Repeat	278935	278960	52	+	.	.
scaffold1328	subtractBed	intrn	107324	107413	.	-	.	Parent=CGI_10012987;
	scaffold1328	TRF	Tandem_Repeat	107324	107413	76	+	.	.
scaffold1328	subtractBed	intrn	107959	108878	.	-	.	Parent=CGI_10012987;
	scaffold1328	TRF	Tandem_Repeat	107959	108878	1210	+	.	.
scaffold1328	subtractBed	intrn	229896	230015	.	-	.	Parent=CGI_10012991;
	scaffold1328	TRF	Tandem_Repeat	229896	230015	150	+	.	.
scaffold1328	subtractBed	intrn	240967	241012	.	-	.	Parent=CGI_10012991;
	scaffold1328	TRF	Tandem_Repeat	240967	241012	92	+	.	.
scaffold1328	subtractBed	intrn	241759	241811	.	-	.	Parent=CGI_10012991;
	scaffold1328	TRF	Tandem_Repeat	241759	241811	106	+	.	.
scaffold1328	subtractBed	intrn	316802	317129	.	-	.	Parent=CGI_10012993;
	scaffold1328	TRF	Tandem_Repeat	316802	317129	333	+	.	.
scaffold1328	subtractBed	intrn	316799	317185	.	-	.	Parent=CGI_10012993;
	scaffold1328	TRF	Tandem_Repeat	316799	317185	258	+	.	.
scaffold1328	subtractBed	intrn	311668	316782	.	-	.	Parent=CGI_10012993;
	scaffold1328	WUBlastX	LTR_Pao	311668	316782	3981	-	.	.
scaffold1328	subtractBed	intrn	317257	317523	.	-	.	Parent=CGI_10012993;
	scaffold1328	WUBlastX	LTR_Pao	317257	317523	58	-	.	.
scaffold1329	subtractBed	intrn	81916	81953	.	-	.	Parent=CGI_10015782;
	scaffold1329	TRF	Tandem_Repeat	81916	81953	58	+	.	.
scaffold1329	subtractBed	intrn	87479	87778	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_TcMar-m44	87479	87778	140	+	.	.
scaffold1329	subtractBed	intrn	93895	94041	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	93895	94041	52	-	.	.
scaffold1329	subtractBed	intrn	91822	92319	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Tag1	91822	92319	29	-	.	.
scaffold1329	subtractBed	intrn	92576	93394	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	92576	93394	423	-	.	.
scaffold1329	subtractBed	intrn	92624	93541	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	92624	93541	188	-	.	.
scaffold1329	subtractBed	intrn	93862	94035	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT	93862	94035	28	-	.	.
scaffold1329	subtractBed	intrn	91963	92553	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	91963	92553	202	-	.	.
scaffold1329	subtractBed	intrn	93898	94077	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	93898	94077	36	-	.	.
scaffold1329	subtractBed	intrn	91897	92229	.	-	.	Parent=CGI_10015782;
	scaffold1329	WUBlastX	DNA_hAT-Ac	91897	92229	59	-	.	.
scaffold1329	subtractBed	intrn	235349	235466	.	+	.	Parent=CGI_10015786;
	scaffold1329	TRF	Tandem_Repeat	235349	235466	69	+	.	.
scaffold1329	subtractBed	intrn	236518	236559	.	+	.	Parent=CGI_10015786;
	scaffold1329	TRF	Tandem_Repeat	236518	236559	84	+	.	.
scaffold1329	subtractBed	intrn	292741	292797	.	-	.	Parent=CGI_10015792;
	scaffold1329	TRF	Tandem_Repeat	292741	292797	114	+	.	.
scaffold1329	subtractBed	intrn	295004	295059	.	-	.	Parent=CGI_10015792;
	scaffold1329	TRF	Tandem_Repeat	295004	295059	112	+	.	.
scaffold1329	subtractBed	intrn	296254	296311	.	-	.	Parent=CGI_10015792;
	scaffold1329	TRF	Tandem_Repeat	296254	296311	116	+	.	.
scaffold1329	subtractBed	intrn	316166	316220	.	-	.	Parent=CGI_10015793;
	scaffold1329	TRF	Tandem_Repeat	316166	316220	101	+	.	.
scaffold1329	subtractBed	intrn	347035	347061	.	-	.	Parent=CGI_10015796;
	scaffold1329	TRF	Tandem_Repeat	347035	347061	54	+	.	.
scaffold1329	subtractBed	intrn	356220	356277	.	-	.	Parent=CGI_10015797;
	scaffold1329	TRF	Tandem_Repeat	356220	356277	116	+	.	.
scaffold1329	subtractBed	intrn	376025	376052	.	+	.	Parent=CGI_10015798;
	scaffold1329	TRF	Tandem_Repeat	376025	376052	56	+	.	.
scaffold1329	subtractBed	intrn	422361	424019	.	-	.	Parent=CGI_10015799;
	scaffold1329	TRF	Tandem_Repeat	422361	424019	2013	+	.	.
scaffold1329	subtractBed	intrn	422361	424019	.	-	.	Parent=CGI_10015799;
	scaffold1329	TRF	Tandem_Repeat	422361	424019	2040	+	.	.
scaffold1330	subtractBed	intrn	22747	23309	.	+	.	Parent=CGI_10009450;
	scaffold1330	TRF	Tandem_Repeat	22747	23309	411	+	.	.
scaffold1330	subtractBed	intrn	22765	23309	.	+	.	Parent=CGI_10009450;
	scaffold1330	TRF	Tandem_Repeat	22765	23309	618	+	.	.
scaffold1330	subtractBed	intrn	23399	23569	.	+	.	Parent=CGI_10009450;
	scaffold1330	TRF	Tandem_Repeat	23399	23569	189	+	.	.
scaffold1330	subtractBed	intrn	23407	23569	.	+	.	Parent=CGI_10009450;
	scaffold1330	TRF	Tandem_Repeat	23407	23569	152	+	.	.
scaffold1330	subtractBed	intrn	23407	23586	.	+	.	Parent=CGI_10009450;
	scaffold1330	TRF	Tandem_Repeat	23407	23586	180	+	.	.
scaffold1330	subtractBed	intrn	54035	54288	.	-	.	Parent=CGI_10009454;
	scaffold1330	TRF	Tandem_Repeat	54035	54318	336	+	.	.
scaffold1330	subtractBed	intrn	65331	65369	.	-	.	Parent=CGI_10009455;
	scaffold1330	TRF	Tandem_Repeat	65331	65369	71	+	.	.
scaffold1330	subtractBed	intrn	187903	187947	.	-	.	Parent=CGI_10009458;
	scaffold1330	TRF	Tandem_Repeat	187903	187947	72	+	.	.
scaffold1330	subtractBed	intrn	189912	189951	.	-	.	Parent=CGI_10009458;
	scaffold1330	TRF	Tandem_Repeat	189912	189951	80	+	.	.
scaffold1330	subtractBed	intrn	190756	190796	.	-	.	Parent=CGI_10009458;
	scaffold1330	TRF	Tandem_Repeat	190756	190796	82	+	.	.
scaffold1330	subtractBed	intrn	191417	191472	.	-	.	Parent=CGI_10009458;
	scaffold1330	TRF	Tandem_Repeat	191417	191472	60	+	.	.
scaffold1333	subtractBed	intrn	7277	7319	.	-	.	Parent=CGI_10009672;
	scaffold1333	TRF	Tandem_Repeat	7277	7319	54	+	.	.
scaffold1333	subtractBed	intrn	8986	9381	.	-	.	Parent=CGI_10009672;
	scaffold1333	TRF	Tandem_Repeat	8986	9381	458	+	.	.
scaffold1333	subtractBed	intrn	11361	11759	.	-	.	Parent=CGI_10009672;
	scaffold1333	WUBlastX	LTR_Copia	11361	11759	38	-	.	.
scaffold1333	subtractBed	intrn	54289	55152	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	LTR_Ngaro	54289	55152	333	-	.	.
scaffold1333	subtractBed	intrn	54157	54510	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	DNA?_Crypton?	54157	54510	28	-	.	.
scaffold1333	subtractBed	intrn	54214	54450	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	LTR_DIRS	54214	54450	56	-	.	.
scaffold1333	subtractBed	intrn	55292	56503	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	LTR_Ngaro	55292	56503	807	-	.	.
scaffold1333	subtractBed	intrn	56872	56934	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	LTR_ERV1	56872	56934	23	-	.	.
scaffold1333	subtractBed	intrn	55235	56761	.	-	.	Parent=CGI_10009674;
	scaffold1333	WUBlastX	LTR_Ngaro	55235	56761	551	-	.	.
scaffold1333	subtractBed	intrn	59309	60271	.	-	.	Parent=CGI_10009676;
	scaffold1333	TRF	Tandem_Repeat	59309	60271	1229	+	.	.
scaffold1333	subtractBed	intrn	91364	91401	.	-	.	Parent=CGI_10009680;
	scaffold1333	TRF	Tandem_Repeat	91364	91401	58	+	.	.
scaffold1333	subtractBed	intrn	115569	116760	.	-	.	Parent=CGI_10009682;
	scaffold1333	TRF	Tandem_Repeat	115569	116760	1500	+	.	.
scaffold1333	subtractBed	intrn	139023	139080	.	+	.	Parent=CGI_10009683;
	scaffold1333	TRF	Tandem_Repeat	139023	139080	116	+	.	.
scaffold1333	subtractBed	intrn	139125	139172	.	+	.	Parent=CGI_10009683;
	scaffold1333	TRF	Tandem_Repeat	139125	139172	96	+	.	.
scaffold1333	subtractBed	intrn	154235	154272	.	+	.	Parent=CGI_10009685;
	scaffold1333	TRF	Tandem_Repeat	154235	154272	60	+	.	.
scaffold1333	subtractBed	intrn	156409	156479	.	+	.	Parent=CGI_10009685;
	scaffold1333	TRF	Tandem_Repeat	156409	156479	90	+	.	.
scaffold1333	subtractBed	intrn	187689	187802	.	+	.	Parent=CGI_10009686;
	scaffold1333	TRF	Tandem_Repeat	187689	187802	185	+	.	.
scaffold1333	subtractBed	intrn	204774	204829	.	-	.	Parent=CGI_10009688;
	scaffold1333	TRF	Tandem_Repeat	204774	204829	85	+	.	.
scaffold1333	subtractBed	intrn	211581	211629	.	-	.	Parent=CGI_10009689;
	scaffold1333	TRF	Tandem_Repeat	211581	211629	50	+	.	.
scaffold1333	subtractBed	intrn	230737	230775	.	-	.	Parent=CGI_10009689;
	scaffold1333	TRF	Tandem_Repeat	230737	230775	78	+	.	.
scaffold1333	subtractBed	intrn	237120	237202	.	-	.	Parent=CGI_10009689;
	scaffold1333	TRF	Tandem_Repeat	237120	237202	157	+	.	.
scaffold1334	subtractBed	intrn	1784	1825	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	1784	1825	50	+	.	.
scaffold1334	subtractBed	intrn	5120	5173	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	5120	5173	108	+	.	.
scaffold1334	subtractBed	intrn	7590	8843	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_Penelope	7590	8843	437	+	.	.
scaffold1334	subtractBed	intrn	9544	9726	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_Penelope	9544	9726	44	+	.	.
scaffold1334	subtractBed	intrn	9121	9687	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_Penelope	9121	9687	58	+	.	.
scaffold1334	subtractBed	intrn	7620	9077	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_Penelope	7620	9077	231	+	.	.
scaffold1334	subtractBed	intrn	8337	9488	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_Penelope	8337	9488	87	+	.	.
scaffold1334	subtractBed	intrn	12515	12649	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_RTE-X	12515	12649	50	+	.	.
scaffold1334	subtractBed	intrn	12703	12798	.	-	.	Parent=CGI_10003403;
	scaffold1334	WUBlastX	LINE_RTE-X	12703	12798	32	+	.	.
scaffold1334	subtractBed	intrn	19088	19119	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	19088	19119	55	+	.	.
scaffold1334	subtractBed	intrn	20423	20760	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	20423	20760	292	+	.	.
scaffold1334	subtractBed	intrn	20425	20783	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	20425	20783	361	+	.	.
scaffold1334	subtractBed	intrn	20423	20785	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	20423	20785	336	+	.	.
scaffold1334	subtractBed	intrn	23220	23402	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	23220	23402	161	+	.	.
scaffold1334	subtractBed	intrn	23176	23612	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	23176	23612	322	+	.	.
scaffold1334	subtractBed	intrn	23406	23613	.	-	.	Parent=CGI_10003403;
	scaffold1334	TRF	Tandem_Repeat	23406	23613	222	+	.	.
scaffold1335	subtractBed	intrn	2406	2678	.	+	.	Parent=CGI_10001395;
	scaffold1335	TRF	Tandem_Repeat	2406	2678	261	+	.	.
scaffold1335	subtractBed	intrn	2406	2678	.	+	.	Parent=CGI_10001395;
	scaffold1335	TRF	Tandem_Repeat	2406	2678	262	+	.	.
scaffold1335	subtractBed	intrn	2406	2678	.	+	.	Parent=CGI_10001395;
	scaffold1335	TRF	Tandem_Repeat	2406	2678	280	+	.	.
scaffold1335	subtractBed	intrn	10255	10379	.	+	.	Parent=CGI_10001395;
	scaffold1335	TRF	Tandem_Repeat	10255	10379	196	+	.	.
scaffold1335	subtractBed	intrn	12438	12554	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	12438	12554	32	-	.	.
scaffold1335	subtractBed	intrn	12674	13180	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	12674	13180	121	-	.	.
scaffold1335	subtractBed	intrn	13183	13659	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	13183	13659	202	-	.	.
scaffold1335	subtractBed	intrn	12557	13180	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	12557	13180	96	-	.	.
scaffold1335	subtractBed	intrn	14866	15423	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	14866	15423	149	-	.	.
scaffold1335	subtractBed	intrn	14980	15543	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	14980	15543	75	-	.	.
scaffold1335	subtractBed	intrn	12758	13204	.	+	.	Parent=CGI_10001395;
	scaffold1335	WUBlastX	LINE_Penelope	12758	13204	141	-	.	.
scaffold1337	subtractBed	intrn	73369	73417	.	-	.	Parent=CGI_10012829;
	scaffold1337	TRF	Tandem_Repeat	73369	73417	98	+	.	.
scaffold1337	subtractBed	intrn	74079	74167	.	-	.	Parent=CGI_10012829;
	scaffold1337	TRF	Tandem_Repeat	74079	74167	178	+	.	.
scaffold1337	subtractBed	intrn	92095	92225	.	+	.	Parent=CGI_10012830;
	scaffold1337	TRF	Tandem_Repeat	92095	92225	119	+	.	.
scaffold1337	subtractBed	intrn	93128	93176	.	+	.	Parent=CGI_10012830;
	scaffold1337	TRF	Tandem_Repeat	93128	93176	98	+	.	.
scaffold1337	subtractBed	intrn	118101	118142	.	-	.	Parent=CGI_10012831;
	scaffold1337	TRF	Tandem_Repeat	118101	118142	52	+	.	.
scaffold1337	subtractBed	intrn	128013	128205	.	-	.	Parent=CGI_10012831;
	scaffold1337	TRF	Tandem_Repeat	128013	128205	206	+	.	.
scaffold1337	subtractBed	intrn	128013	128205	.	+	.	Parent=CGI_10012833;
	scaffold1337	TRF	Tandem_Repeat	128013	128205	206	+	.	.
scaffold1337	subtractBed	intrn	135831	136022	.	+	.	Parent=CGI_10012833;
	scaffold1337	WUBlastX	LINE_RTE-X	135831	136022	51	+	.	.
scaffold1337	subtractBed	intrn	139517	140178	.	+	.	Parent=CGI_10012833;
	scaffold1337	TRF	Tandem_Repeat	139517	140178	805	+	.	.
scaffold1337	subtractBed	intrn	155282	155379	.	+	.	Parent=CGI_10012836;
	scaffold1337	TRF	Tandem_Repeat	155282	155379	126	+	.	.
scaffold1337	subtractBed	intrn	162287	162329	.	+	.	Parent=CGI_10012837;
	scaffold1337	TRF	Tandem_Repeat	162287	162329	86	+	.	.
scaffold1337	subtractBed	intrn	167621	167711	.	-	.	Parent=CGI_10012838;
	scaffold1337	TRF	Tandem_Repeat	167621	167711	94	+	.	.
scaffold1337	subtractBed	intrn	167946	167980	.	-	.	Parent=CGI_10012838;
	scaffold1337	TRF	Tandem_Repeat	167946	167980	70	+	.	.
scaffold1337	subtractBed	intrn	169108	169132	.	-	.	Parent=CGI_10012838;
	scaffold1337	TRF	Tandem_Repeat	169108	169132	50	+	.	.
scaffold1337	subtractBed	intrn	190362	190420	.	-	.	Parent=CGI_10012840;
	scaffold1337	TRF	Tandem_Repeat	190362	190420	57	+	.	.
scaffold1337	subtractBed	intrn	281979	282545	.	-	.	Parent=CGI_10012842;
	scaffold1337	WUBlastX	LINE_L2	281979	282545	82	-	.	.
scaffold1337	subtractBed	intrn	281907	282356	.	-	.	Parent=CGI_10012842;
	scaffold1337	WUBlastX	LINE_L2	281907	282356	54	-	.	.
scaffold1337	subtractBed	intrn	281970	282569	.	-	.	Parent=CGI_10012842;
	scaffold1337	WUBlastX	LINE_L1	281970	282722	25	-	.	.
scaffold1337	subtractBed	intrn	333710	334519	.	-	.	Parent=CGI_10012845;
	scaffold1337	TRF	Tandem_Repeat	333710	334519	755	+	.	.
scaffold1337	subtractBed	intrn	340213	340270	.	-	.	Parent=CGI_10012845;
	scaffold1337	TRF	Tandem_Repeat	340213	340270	98	+	.	.
scaffold1337	subtractBed	intrn	340213	340270	.	+	.	Parent=CGI_10012846;
	scaffold1337	TRF	Tandem_Repeat	340213	340270	98	+	.	.
scaffold1340	subtractBed	intrn	6291	6294	.	-	.	Parent=CGI_10001405;
	scaffold1340	WUBlastX	DNA_hAT	4669	6294	404	-	.	.
scaffold1341	subtractBed	intrn	7033	7072	.	+	.	Parent=CGI_10004662;
	scaffold1341	TRF	Tandem_Repeat	7033	7072	62	+	.	.
scaffold1341	subtractBed	intrn	7062	7121	.	+	.	Parent=CGI_10004662;
	scaffold1341	TRF	Tandem_Repeat	7062	7121	102	+	.	.
scaffold1341	subtractBed	intrn	5529	5801	.	+	.	Parent=CGI_10004662;
	scaffold1341	WUBlastX	LINE_L1-Tx1	5529	5801	21	-	.	.
scaffold1341	subtractBed	intrn	5598	5750	.	+	.	Parent=CGI_10004662;
	scaffold1341	WUBlastX	LINE_L1	5598	5750	23	-	.	.
scaffold1341	subtractBed	intrn	12761	12807	.	+	.	Parent=CGI_10004662;
	scaffold1341	TRF	Tandem_Repeat	12761	12807	67	+	.	.
scaffold1341	subtractBed	intrn	14318	14361	.	+	.	Parent=CGI_10004662;
	scaffold1341	TRF	Tandem_Repeat	14318	14361	61	+	.	.
scaffold1341	subtractBed	intrn	22343	22594	.	+	.	Parent=CGI_10004662;
	scaffold1341	WUBlastX	LINE_L2	22343	22594	57	-	.	.
scaffold1341	subtractBed	intrn	22346	22552	.	+	.	Parent=CGI_10004662;
	scaffold1341	WUBlastX	LINE_L2	22346	22552	100	-	.	.
scaffold1341	subtractBed	intrn	21653	22537	.	+	.	Parent=CGI_10004662;
	scaffold1341	WUBlastX	LINE_L2	21653	22537	93	-	.	.
scaffold1341	subtractBed	intrn	26895	26944	.	+	.	Parent=CGI_10004662;
	scaffold1341	TRF	Tandem_Repeat	26895	26944	100	+	.	.
scaffold1341	subtractBed	intrn	37139	37532	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	37139	37532	522	+	.	.
scaffold1341	subtractBed	intrn	37555	37723	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	37555	37723	223	+	.	.
scaffold1341	subtractBed	intrn	38216	38425	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	38216	38425	163	+	.	.
scaffold1341	subtractBed	intrn	39684	39851	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	39684	39851	219	+	.	.
scaffold1341	subtractBed	intrn	39846	40842	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	39846	40842	1401	+	.	.
scaffold1341	subtractBed	intrn	47929	48858	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	47929	48858	1446	+	.	.
scaffold1341	subtractBed	intrn	49472	50551	.	-	.	Parent=CGI_10004664;
	scaffold1341	TRF	Tandem_Repeat	49472	50551	1567	+	.	.
scaffold1341	subtractBed	intrn	73014	73121	.	+	.	Parent=CGI_10004665;
	scaffold1341	TRF	Tandem_Repeat	73014	73121	207	+	.	.
scaffold1341	subtractBed	intrn	79499	79711	.	+	.	Parent=CGI_10004665;
	scaffold1341	TRF	Tandem_Repeat	79499	79711	345	+	.	.
scaffold1343	subtractBed	intrn	8242	8299	.	+	.	Parent=CGI_10005044;
	scaffold1343	TRF	Tandem_Repeat	8242	8299	116	+	.	.
scaffold1343	subtractBed	intrn	31507	31542	.	+	.	Parent=CGI_10005045;
	scaffold1343	TRF	Tandem_Repeat	31507	31542	72	+	.	.
scaffold1343	subtractBed	intrn	50479	50531	.	+	.	Parent=CGI_10005047;
	scaffold1343	TRF	Tandem_Repeat	50479	50531	106	+	.	.
scaffold1343	subtractBed	intrn	52238	52311	.	+	.	Parent=CGI_10005047;
	scaffold1343	TRF	Tandem_Repeat	52238	52311	112	+	.	.
scaffold1343	subtractBed	intrn	56588	56655	.	+	.	Parent=CGI_10005047;
	scaffold1343	TRF	Tandem_Repeat	56588	56655	136	+	.	.
scaffold1343	subtractBed	intrn	56794	56839	.	+	.	Parent=CGI_10005047;
	scaffold1343	TRF	Tandem_Repeat	56794	56839	83	+	.	.
scaffold1343	subtractBed	intrn	95103	95269	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	95103	95269	274	+	.	.
scaffold1343	subtractBed	intrn	96001	96107	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	96001	96107	187	+	.	.
scaffold1343	subtractBed	intrn	101156	101236	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	101156	101236	135	+	.	.
scaffold1343	subtractBed	intrn	102312	102464	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	102312	102464	148	+	.	.
scaffold1343	subtractBed	intrn	102988	103942	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	102988	103942	1213	+	.	.
scaffold1343	subtractBed	intrn	102988	103942	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	102988	103942	1359	+	.	.
scaffold1343	subtractBed	intrn	102988	103942	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	102988	103942	1386	+	.	.
scaffold1343	subtractBed	intrn	99765	100601	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	99765	100601	305	+	.	.
scaffold1343	subtractBed	intrn	100053	100784	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	100053	100784	194	+	.	.
scaffold1343	subtractBed	intrn	99903	100589	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	99903	100589	351	+	.	.
scaffold1343	subtractBed	intrn	99084	100607	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	99084	100607	238	+	.	.
scaffold1343	subtractBed	intrn	100638	100958	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	100638	100958	99	+	.	.
scaffold1343	subtractBed	intrn	98238	99761	.	+	.	Parent=CGI_10005048;
	scaffold1343	WUBlastX	DNA_Maverick	98238	99761	140	+	.	.
scaffold1343	subtractBed	intrn	109666	109703	.	+	.	Parent=CGI_10005048;
	scaffold1343	TRF	Tandem_Repeat	109666	109703	67	+	.	.
scaffold1345	subtractBed	intrn	156894	156939	.	-	.	Parent=CGI_10016281;
	scaffold1345	TRF	Tandem_Repeat	156894	156939	92	+	.	.
scaffold1345	subtractBed	intrn	158844	158876	.	-	.	Parent=CGI_10016281;
	scaffold1345	TRF	Tandem_Repeat	158844	158876	66	+	.	.
scaffold1345	subtractBed	intrn	241500	241631	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	241500	241631	58	-	.	.
scaffold1345	subtractBed	intrn	241565	241699	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	241565	241699	23	-	.	.
scaffold1345	subtractBed	intrn	242357	242401	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	242357	242401	29	-	.	.
scaffold1345	subtractBed	intrn	243514	243759	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	243514	243759	59	-	.	.
scaffold1345	subtractBed	intrn	240272	240805	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	240272	240805	153	-	.	.
scaffold1345	subtractBed	intrn	240230	240706	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	240230	240706	179	-	.	.
scaffold1345	subtractBed	intrn	240260	240661	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	240260	240661	205	-	.	.
scaffold1345	subtractBed	intrn	241500	241607	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	241500	241607	77	-	.	.
scaffold1345	subtractBed	intrn	242416	242862	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	242416	242862	180	-	.	.
scaffold1345	subtractBed	intrn	243484	243612	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	243484	243612	29	-	.	.
scaffold1345	subtractBed	intrn	240036	240263	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	240036	240263	116	-	.	.
scaffold1345	subtractBed	intrn	240081	240335	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	240081	240335	145	-	.	.
scaffold1345	subtractBed	intrn	242261	242401	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	242261	242401	24	-	.	.
scaffold1345	subtractBed	intrn	239985	240275	.	-	.	Parent=CGI_10016283;
	scaffold1345	WUBlastX	LTR_Gypsy	239985	240275	105	-	.	.
scaffold1345	subtractBed	intrn	245878	246106	.	-	.	Parent=CGI_10016283;
	scaffold1345	TRF	Tandem_Repeat	245878	246106	440	+	.	.
scaffold1345	subtractBed	intrn	366786	367046	.	-	.	Parent=CGI_10016287;
	scaffold1345	TRF	Tandem_Repeat	366786	367046	495	+	.	.
scaffold1345	subtractBed	intrn	393168	393378	.	-	.	Parent=CGI_10016288;
	scaffold1345	TRF	Tandem_Repeat	393168	393378	287	+	.	.
scaffold1345	subtractBed	intrn	393204	393279	.	-	.	Parent=CGI_10016288;
	scaffold1345	TRF	Tandem_Repeat	393204	393279	51	+	.	.
scaffold1345	subtractBed	intrn	393161	393386	.	-	.	Parent=CGI_10016288;
	scaffold1345	TRF	Tandem_Repeat	393161	393386	326	+	.	.
scaffold1345	subtractBed	intrn	394156	394394	.	-	.	Parent=CGI_10016288;
	scaffold1345	TRF	Tandem_Repeat	394156	394394	301	+	.	.
scaffold1345	subtractBed	intrn	395601	395641	.	-	.	Parent=CGI_10016288;
	scaffold1345	TRF	Tandem_Repeat	395601	395641	82	+	.	.
scaffold1345	subtractBed	intrn	396618	396623	.	-	.	Parent=CGI_10016288;
	scaffold1345	WUBlastX	LINE_L1	396339	396623	31	-	.	.
scaffold1345	subtractBed	intrn	405358	405384	.	-	.	Parent=CGI_10016289;
	scaffold1345	TRF	Tandem_Repeat	405358	405384	54	+	.	.
scaffold1345	subtractBed	intrn	455311	455348	.	-	.	Parent=CGI_10016290;
	scaffold1345	TRF	Tandem_Repeat	455311	455348	76	+	.	.
scaffold1347	subtractBed	intrn	21728	21850	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	LTR_Gypsy-Cigr	21728	21850	24	+	.	.
scaffold1347	subtractBed	intrn	21927	22226	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	LTR_Gypsy-Cigr	21927	22226	94	+	.	.
scaffold1347	subtractBed	intrn	24180	24299	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	24180	24299	42	+	.	.
scaffold1347	subtractBed	intrn	23753	24178	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	23753	24178	166	+	.	.
scaffold1347	subtractBed	intrn	21903	22289	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	LTR_Gypsy	21903	22289	70	+	.	.
scaffold1347	subtractBed	intrn	24824	25177	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	24824	25177	32	+	.	.
scaffold1347	subtractBed	intrn	25949	26350	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	25949	26350	183	+	.	.
scaffold1347	subtractBed	intrn	26388	26600	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	26388	26600	43	+	.	.
scaffold1347	subtractBed	intrn	27301	28836	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	27301	28836	869	-	.	.
scaffold1347	subtractBed	intrn	25542	25673	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	25542	25673	50	+	.	.
scaffold1347	subtractBed	intrn	24887	25108	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	24887	25108	40	+	.	.
scaffold1347	subtractBed	intrn	26433	26867	.	-	.	Parent=CGI_10012972;
	scaffold1347	WUBlastX	DNA_IS4EU	26433	26867	97	+	.	.
scaffold1347	subtractBed	intrn	53564	53601	.	+	.	Parent=CGI_10012973;
	scaffold1347	TRF	Tandem_Repeat	53564	53601	76	+	.	.
scaffold1347	subtractBed	intrn	56200	56236	.	+	.	Parent=CGI_10012973;
	scaffold1347	TRF	Tandem_Repeat	56200	56236	51	+	.	.
scaffold1347	subtractBed	intrn	141865	142209	.	+	.	Parent=CGI_10012974;
	scaffold1347	WUBlastX	LINE_RTE-X	141865	142209	57	+	.	.
scaffold1347	subtractBed	intrn	141609	141809	.	+	.	Parent=CGI_10012974;
	scaffold1347	WUBlastX	LINE_RTE-X	141609	141809	88	+	.	.
scaffold1347	subtractBed	intrn	141761	142000	.	+	.	Parent=CGI_10012974;
	scaffold1347	WUBlastX	LINE_RTE-X	141761	142000	58	+	.	.
scaffold1347	subtractBed	intrn	141555	141758	.	+	.	Parent=CGI_10012974;
	scaffold1347	WUBlastX	LINE_RTE-X	141555	141758	114	+	.	.
scaffold1347	subtractBed	intrn	142012	142251	.	+	.	Parent=CGI_10012974;
	scaffold1347	WUBlastX	LINE_RTE-X	142012	142251	41	+	.	.
scaffold1347	subtractBed	intrn	197081	197135	.	+	.	Parent=CGI_10012977;
	scaffold1347	TRF	Tandem_Repeat	197081	197135	110	+	.	.
scaffold1347	subtractBed	intrn	197252	197302	.	+	.	Parent=CGI_10012977;
	scaffold1347	TRF	Tandem_Repeat	197252	197302	93	+	.	.
scaffold1347	subtractBed	intrn	198922	198971	.	+	.	Parent=CGI_10012977;
	scaffold1347	TRF	Tandem_Repeat	198922	198971	100	+	.	.
scaffold1347	subtractBed	intrn	253751	254334	.	+	.	Parent=CGI_10012979;
	scaffold1347	TRF	Tandem_Repeat	253751	254334	600	+	.	.
scaffold1347	subtractBed	intrn	256503	256663	.	+	.	Parent=CGI_10012979;
	scaffold1347	TRF	Tandem_Repeat	256503	256663	171	+	.	.
scaffold1347	subtractBed	intrn	256671	256779	.	+	.	Parent=CGI_10012979;
	scaffold1347	TRF	Tandem_Repeat	256671	256779	103	+	.	.
scaffold1347	subtractBed	intrn	256844	256931	.	+	.	Parent=CGI_10012979;
	scaffold1347	TRF	Tandem_Repeat	256844	256931	90	+	.	.
scaffold1347	subtractBed	intrn	265172	265268	.	-	.	Parent=CGI_10012980;
	scaffold1347	TRF	Tandem_Repeat	265172	265268	103	+	.	.
scaffold1347	subtractBed	intrn	265532	265567	.	-	.	Parent=CGI_10012980;
	scaffold1347	TRF	Tandem_Repeat	265532	265567	72	+	.	.
scaffold1347	subtractBed	intrn	266478	266510	.	-	.	Parent=CGI_10012980;
	scaffold1347	TRF	Tandem_Repeat	266478	266510	50	+	.	.
scaffold1347	subtractBed	intrn	266754	266869	.	-	.	Parent=CGI_10012980;
	scaffold1347	TRF	Tandem_Repeat	266754	266869	78	+	.	.
scaffold1347	subtractBed	intrn	266754	266858	.	-	.	Parent=CGI_10012980;
	scaffold1347	TRF	Tandem_Repeat	266754	266858	94	+	.	.
scaffold1347	subtractBed	intrn	317032	317057	.	+	.	Parent=CGI_10012984;
	scaffold1347	TRF	Tandem_Repeat	317032	317057	52	+	.	.
scaffold1347	subtractBed	intrn	325152	325892	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	325152	325892	458	+	.	.
scaffold1347	subtractBed	intrn	325913	326254	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	325913	326254	213	+	.	.
scaffold1347	subtractBed	intrn	326319	326438	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	326319	326438	40	+	.	.
scaffold1347	subtractBed	intrn	326358	326495	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	326358	326495	29	+	.	.
scaffold1347	subtractBed	intrn	326475	326669	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	326475	326669	32	+	.	.
scaffold1347	subtractBed	intrn	325326	326024	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	325326	326024	261	+	.	.
scaffold1347	subtractBed	intrn	326289	326441	.	+	.	Parent=CGI_10012984;
	scaffold1347	WUBlastX	DNA_Maverick	326289	326441	27	+	.	.
scaffold1348	subtractBed	intrn	44244	44288	.	+	.	Parent=CGI_10008064;
	scaffold1348	TRF	Tandem_Repeat	44244	44288	90	+	.	.
scaffold1348	subtractBed	intrn	45931	45977	.	+	.	Parent=CGI_10008064;
	scaffold1348	TRF	Tandem_Repeat	45931	45977	94	+	.	.
scaffold1348	subtractBed	intrn	169486	169572	.	+	.	Parent=CGI_10008093;
	scaffold1348	TRF	Tandem_Repeat	169486	169572	104	+	.	.
scaffold1348	subtractBed	intrn	186927	187455	.	+	.	Parent=CGI_10008094;
	scaffold1348	TRF	Tandem_Repeat	186927	187455	470	+	.	.
scaffold1348	subtractBed	intrn	186943	187458	.	+	.	Parent=CGI_10008094;
	scaffold1348	TRF	Tandem_Repeat	186943	187458	543	+	.	.
scaffold1349	subtractBed	intrn	77014	77473	.	+	.	Parent=CGI_10009936;
	scaffold1349	TRF	Tandem_Repeat	77014	77473	659	+	.	.
scaffold1349	subtractBed	intrn	82669	82702	.	+	.	Parent=CGI_10009936;
	scaffold1349	TRF	Tandem_Repeat	82669	82702	68	+	.	.
scaffold1349	subtractBed	intrn	101255	101725	.	-	.	Parent=CGI_10009938;
	scaffold1349	WUBlastX	LINE_L2	101255	101725	74	+	.	.
scaffold1349	subtractBed	intrn	101342	101686	.	-	.	Parent=CGI_10009938;
	scaffold1349	WUBlastX	LINE_CR1-L2	101342	101686	96	+	.	.
scaffold1349	subtractBed	intrn	155751	155784	.	-	.	Parent=CGI_10009942;
	scaffold1349	TRF	Tandem_Repeat	155751	155784	50	+	.	.
scaffold1349	subtractBed	intrn	156491	156592	.	-	.	Parent=CGI_10009942;
	scaffold1349	WUBlastX	LINE_L2	156491	156592	30	-	.	.
scaffold1349	subtractBed	intrn	156744	156908	.	-	.	Parent=CGI_10009942;
	scaffold1349	WUBlastX	LINE_L2	156744	156908	34	-	.	.
scaffold1349	subtractBed	intrn	157703	157748	.	-	.	Parent=CGI_10009942;
	scaffold1349	TRF	Tandem_Repeat	157703	157748	92	+	.	.
scaffold1349	subtractBed	intrn	210563	210636	.	-	.	Parent=CGI_10009943;
	scaffold1349	TRF	Tandem_Repeat	210563	210636	118	+	.	.
scaffold1349	subtractBed	intrn	216711	216759	.	-	.	Parent=CGI_10009943;
	scaffold1349	TRF	Tandem_Repeat	216711	216759	98	+	.	.
scaffold1349	subtractBed	intrn	228528	228615	.	-	.	Parent=CGI_10009943;
	scaffold1349	TRF	Tandem_Repeat	228528	228615	169	+	.	.
scaffold1350	subtractBed	intrn	37817	37867	.	-	.	Parent=CGI_10017291;
	scaffold1350	TRF	Tandem_Repeat	37817	37867	102	+	.	.
scaffold1350	subtractBed	intrn	39732	40478	.	-	.	Parent=CGI_10017291;
	scaffold1350	TRF	Tandem_Repeat	39732	40478	715	+	.	.
scaffold1350	subtractBed	intrn	49985	50015	.	-	.	Parent=CGI_10017292;
	scaffold1350	TRF	Tandem_Repeat	49985	50015	62	+	.	.
scaffold1350	subtractBed	intrn	53466	54195	.	-	.	Parent=CGI_10017292;
	scaffold1350	TRF	Tandem_Repeat	53466	54195	431	+	.	.
scaffold1350	subtractBed	intrn	53466	54195	.	-	.	Parent=CGI_10017292;
	scaffold1350	TRF	Tandem_Repeat	53466	54195	467	+	.	.
scaffold1350	subtractBed	intrn	53474	54197	.	-	.	Parent=CGI_10017292;
	scaffold1350	TRF	Tandem_Repeat	53474	54197	372	+	.	.
scaffold1350	subtractBed	intrn	95413	95507	.	-	.	Parent=CGI_10017297;
	scaffold1350	TRF	Tandem_Repeat	95413	95507	190	+	.	.
scaffold1350	subtractBed	intrn	110016	110396	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Ngaro	110016	110396	45	-	.	.
scaffold1350	subtractBed	intrn	109950	110333	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Ngaro	109950	110333	22	-	.	.
scaffold1350	subtractBed	intrn	109607	109831	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Ngaro	109607	109831	81	-	.	.
scaffold1350	subtractBed	intrn	119829	120107	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Gypsy	119829	120107	63	+	.	.
scaffold1350	subtractBed	intrn	119245	119892	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Gypsy	119245	119892	556	+	.	.
scaffold1350	subtractBed	intrn	119254	120060	.	-	.	Parent=CGI_10017297;
	scaffold1350	WUBlastX	LTR_Gypsy	119254	120060	343	+	.	.
scaffold1350	subtractBed	intrn	119829	120107	.	+	.	Parent=CGI_10017298;
	scaffold1350	WUBlastX	LTR_Gypsy	119829	120107	63	+	.	.
scaffold1350	subtractBed	intrn	119245	119892	.	+	.	Parent=CGI_10017298;
	scaffold1350	WUBlastX	LTR_Gypsy	119245	119892	556	+	.	.
scaffold1350	subtractBed	intrn	119254	120060	.	+	.	Parent=CGI_10017298;
	scaffold1350	WUBlastX	LTR_Gypsy	119254	120060	343	+	.	.
scaffold1350	subtractBed	intrn	124085	124410	.	+	.	Parent=CGI_10017298;
	scaffold1350	TRF	Tandem_Repeat	124085	124410	426	+	.	.
scaffold1350	subtractBed	intrn	124304	124556	.	+	.	Parent=CGI_10017298;
	scaffold1350	TRF	Tandem_Repeat	124304	124566	156	+	.	.
scaffold1350	subtractBed	intrn	136861	136896	.	-	.	Parent=CGI_10017299;
	scaffold1350	TRF	Tandem_Repeat	136861	136896	63	+	.	.
scaffold1350	subtractBed	intrn	149035	149661	.	-	.	Parent=CGI_10017301;
	scaffold1350	WUBlastX	LINE_L1-Tx1	149035	149661	23	+	.	.
scaffold1350	subtractBed	intrn	176587	177132	.	-	.	Parent=CGI_10017302;
	scaffold1350	WUBlastX	LINE_L2	176587	177132	93	+	.	.
scaffold1350	subtractBed	intrn	177453	181244	.	-	.	Parent=CGI_10017302;
	scaffold1350	WUBlastX	LINE_L1-Tx1	177453	181244	1877	+	.	.
scaffold1350	subtractBed	intrn	185813	185939	.	-	.	Parent=CGI_10017302;
	scaffold1350	TRF	Tandem_Repeat	185813	185939	132	+	.	.
scaffold1350	subtractBed	intrn	185819	185926	.	-	.	Parent=CGI_10017302;
	scaffold1350	TRF	Tandem_Repeat	185819	185926	125	+	.	.
scaffold1350	subtractBed	intrn	185824	185939	.	-	.	Parent=CGI_10017302;
	scaffold1350	TRF	Tandem_Repeat	185824	185939	133	+	.	.
scaffold1350	subtractBed	intrn	203271	203672	.	-	.	Parent=CGI_10017304;
	scaffold1350	WUBlastX	LTR_Ngaro	203271	203672	170	-	.	.
scaffold1350	subtractBed	intrn	207526	207780	.	-	.	Parent=CGI_10017304;
	scaffold1350	WUBlastX	LINE_L1	207526	207780	65	-	.	.
scaffold1350	subtractBed	intrn	289224	289406	.	+	.	Parent=CGI_10017309;
	scaffold1350	TRF	Tandem_Repeat	289224	289406	142	+	.	.
scaffold1350	subtractBed	intrn	347283	347593	.	+	.	Parent=CGI_10017314;
	scaffold1350	TRF	Tandem_Repeat	347283	347593	264	+	.	.
scaffold1350	subtractBed	intrn	347272	347554	.	+	.	Parent=CGI_10017314;
	scaffold1350	TRF	Tandem_Repeat	347272	347554	348	+	.	.
scaffold1350	subtractBed	intrn	347761	347978	.	+	.	Parent=CGI_10017314;
	scaffold1350	TRF	Tandem_Repeat	347761	347978	223	+	.	.
scaffold1350	subtractBed	intrn	347756	347989	.	+	.	Parent=CGI_10017314;
	scaffold1350	TRF	Tandem_Repeat	347756	347989	423	+	.	.
scaffold1350	subtractBed	intrn	349382	349435	.	+	.	Parent=CGI_10017314;
	scaffold1350	TRF	Tandem_Repeat	349382	349435	108	+	.	.
scaffold1350	subtractBed	intrn	385612	385671	.	+	.	Parent=CGI_10017316;
	scaffold1350	TRF	Tandem_Repeat	385612	385671	106	+	.	.
scaffold1350	subtractBed	intrn	391739	391823	.	+	.	Parent=CGI_10017316;
	scaffold1350	TRF	Tandem_Repeat	391739	391823	161	+	.	.
scaffold1350	subtractBed	intrn	392046	392081	.	+	.	Parent=CGI_10017316;
	scaffold1350	TRF	Tandem_Repeat	392046	392081	72	+	.	.
scaffold1350	subtractBed	intrn	395210	395252	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	395210	395252	52	+	.	.
scaffold1350	subtractBed	intrn	395367	395401	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	395367	395401	70	+	.	.
scaffold1350	subtractBed	intrn	400863	401842	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	400863	401842	1265	+	.	.
scaffold1350	subtractBed	intrn	397661	397804	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	397661	397804	41	-	.	.
scaffold1350	subtractBed	intrn	397022	397750	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	397022	397750	188	-	.	.
scaffold1350	subtractBed	intrn	398346	398513	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	398346	398513	81	-	.	.
scaffold1350	subtractBed	intrn	398385	398564	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_CR1	398385	398564	37	-	.	.
scaffold1350	subtractBed	intrn	397821	397940	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-BovB	397821	397940	53	-	.	.
scaffold1350	subtractBed	intrn	397927	398334	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	397927	398334	157	-	.	.
scaffold1350	subtractBed	intrn	398590	398688	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	398590	398688	26	-	.	.
scaffold1350	subtractBed	intrn	399909	400019	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_L1-Tx1	399909	400019	55	-	.	.
scaffold1350	subtractBed	intrn	400121	400549	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_L1-Tx1	400121	400549	20	-	.	.
scaffold1350	subtractBed	intrn	398590	398775	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	398590	398775	20	-	.	.
scaffold1350	subtractBed	intrn	396908	397780	.	+	.	Parent=CGI_10017317;
	scaffold1350	WUBlastX	LINE_RTE-X	396908	397780	125	-	.	.
scaffold1350	subtractBed	intrn	407339	408471	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	407339	408471	376	+	.	.
scaffold1350	subtractBed	intrn	407339	408471	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	407339	408471	1167	+	.	.
scaffold1350	subtractBed	intrn	407339	408471	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	407339	408471	1200	+	.	.
scaffold1350	subtractBed	intrn	410389	410691	.	+	.	Parent=CGI_10017317;
	scaffold1350	TRF	Tandem_Repeat	410389	410691	597	+	.	.
scaffold1350	subtractBed	intrn	451165	451542	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_Pao	451165	451542	74	+	.	.
scaffold1350	subtractBed	intrn	452136	456443	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_Pao	452136	456443	2853	+	.	.
scaffold1350	subtractBed	intrn	451563	455030	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_Pao	451563	455030	2276	+	.	.
scaffold1350	subtractBed	intrn	459717	460511	.	-	.	Parent=CGI_10017319;
	scaffold1350	TRF	Tandem_Repeat	459717	460511	1527	+	.	.
scaffold1350	subtractBed	intrn	468883	469509	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	468883	469509	252	+	.	.
scaffold1350	subtractBed	intrn	469511	469639	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	469511	469639	87	+	.	.
scaffold1350	subtractBed	intrn	468048	468842	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	468048	468842	114	+	.	.
scaffold1350	subtractBed	intrn	470092	471486	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	470092	471486	746	+	.	.
scaffold1350	subtractBed	intrn	469018	469560	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	469018	469560	356	+	.	.
scaffold1350	subtractBed	intrn	471327	472238	.	-	.	Parent=CGI_10017319;
	scaffold1350	WUBlastX	LTR_DIRS	471327	472238	520	+	.	.
scaffold1352	subtractBed	intrn	51896	51952	.	-	.	Parent=CGI_10018408;
	scaffold1352	TRF	Tandem_Repeat	51896	51952	114	+	.	.
scaffold1352	subtractBed	intrn	169453	169504	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	169453	169504	104	+	.	.
scaffold1352	subtractBed	intrn	175390	175421	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	175390	175421	55	+	.	.
scaffold1352	subtractBed	intrn	177098	177182	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	177098	177182	53	+	.	.
scaffold1352	subtractBed	intrn	177203	177282	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	177203	177282	54	+	.	.
scaffold1352	subtractBed	intrn	177970	178012	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	177970	178012	86	+	.	.
scaffold1352	subtractBed	intrn	178122	178160	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	178122	178160	78	+	.	.
scaffold1352	subtractBed	intrn	172261	173013	.	-	.	Parent=CGI_10018412;
	scaffold1352	WUBlastX	DNA_TcMar-Tc1	172261	173013	153	-	.	.
scaffold1352	subtractBed	intrn	172861	173193	.	-	.	Parent=CGI_10018412;
	scaffold1352	WUBlastX	DNA_TcMar-Tc1	172861	173193	49	-	.	.
scaffold1352	subtractBed	intrn	183767	183833	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	183767	183833	80	+	.	.
scaffold1352	subtractBed	intrn	185381	185447	.	-	.	Parent=CGI_10018412;
	scaffold1352	TRF	Tandem_Repeat	185381	185447	82	+	.	.
scaffold1352	subtractBed	intrn	217162	217428	.	-	.	Parent=CGI_10018413;
	scaffold1352	WUBlastX	LINE_L1	217162	217428	91	-	.	.
scaffold1352	subtractBed	intrn	217165	217584	.	-	.	Parent=CGI_10018413;
	scaffold1352	WUBlastX	LINE_L1	217165	217584	52	-	.	.
scaffold1352	subtractBed	intrn	217174	217395	.	-	.	Parent=CGI_10018413;
	scaffold1352	WUBlastX	LINE_L1-Tx1	217174	217395	133	-	.	.
scaffold1352	subtractBed	intrn	221577	221606	.	-	.	Parent=CGI_10018413;
	scaffold1352	TRF	Tandem_Repeat	221577	221606	51	+	.	.
scaffold1352	subtractBed	intrn	237646	237678	.	-	.	Parent=CGI_10018416;
	scaffold1352	TRF	Tandem_Repeat	237646	237678	66	+	.	.
scaffold1352	subtractBed	intrn	244666	244699	.	-	.	Parent=CGI_10018416;
	scaffold1352	TRF	Tandem_Repeat	244666	244699	50	+	.	.
scaffold1352	subtractBed	intrn	300405	300613	.	+	.	Parent=CGI_10018423;
	scaffold1352	TRF	Tandem_Repeat	300405	300613	102	+	.	.
scaffold1352	subtractBed	intrn	400730	400771	.	+	.	Parent=CGI_10018425;
	scaffold1352	TRF	Tandem_Repeat	400730	400771	68	+	.	.
scaffold1352	subtractBed	intrn	402393	402536	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	402393	402536	41	+	.	.
scaffold1352	subtractBed	intrn	404175	404543	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	404175	404543	114	+	.	.
scaffold1352	subtractBed	intrn	402990	403373	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	402990	403373	29	+	.	.
scaffold1352	subtractBed	intrn	402972	403022	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE	402972	403022	24	+	.	.
scaffold1352	subtractBed	intrn	401497	401757	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_L2	401497	401757	75	+	.	.
scaffold1352	subtractBed	intrn	403072	403155	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	403072	403155	38	+	.	.
scaffold1352	subtractBed	intrn	402007	402435	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	402007	402435	85	+	.	.
scaffold1352	subtractBed	intrn	403387	404196	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	403387	404196	165	+	.	.
scaffold1352	subtractBed	intrn	403200	403373	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	403200	403373	45	+	.	.
scaffold1352	subtractBed	intrn	401494	401817	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_L1-Tx1	401494	401817	48	+	.	.
scaffold1352	subtractBed	intrn	401986	402366	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	401986	402366	154	+	.	.
scaffold1352	subtractBed	intrn	402330	402494	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	402330	402494	49	+	.	.
scaffold1352	subtractBed	intrn	403722	405050	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	403722	405050	37	+	.	.
scaffold1352	subtractBed	intrn	402384	402626	.	+	.	Parent=CGI_10018425;
	scaffold1352	WUBlastX	LINE_RTE-X	402384	402626	23	+	.	.
scaffold1352	subtractBed	intrn	453033	453086	.	+	.	Parent=CGI_10018429;
	scaffold1352	TRF	Tandem_Repeat	453033	453086	81	+	.	.
scaffold1352	subtractBed	intrn	495643	495673	.	-	.	Parent=CGI_10018431;
	scaffold1352	TRF	Tandem_Repeat	495643	495673	62	+	.	.
scaffold1353	subtractBed	intrn	26984	27016	.	-	.	Parent=CGI_10003639;
	scaffold1353	TRF	Tandem_Repeat	26984	27016	66	+	.	.
scaffold1353	subtractBed	intrn	27016	27071	.	-	.	Parent=CGI_10003639;
	scaffold1353	TRF	Tandem_Repeat	27016	27071	112	+	.	.
scaffold1354	subtractBed	intrn	102973	103949	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	102973	103949	1305	+	.	.
scaffold1354	subtractBed	intrn	104153	104775	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	104153	104775	799	+	.	.
scaffold1354	subtractBed	intrn	105300	105670	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	105300	105670	425	+	.	.
scaffold1354	subtractBed	intrn	108059	108175	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	108059	108175	189	+	.	.
scaffold1354	subtractBed	intrn	108204	108388	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	108204	108413	251	+	.	.
scaffold1354	subtractBed	intrn	110273	110605	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	110273	110605	386	+	.	.
scaffold1354	subtractBed	intrn	111115	111432	.	-	.	Parent=CGI_10014929;
	scaffold1354	TRF	Tandem_Repeat	111115	111432	573	+	.	.
scaffold1354	subtractBed	intrn	117496	117530	.	+	.	Parent=CGI_10014930;
	scaffold1354	TRF	Tandem_Repeat	117496	117530	54	+	.	.
scaffold1354	subtractBed	intrn	123395	123911	.	+	.	Parent=CGI_10014930;
	scaffold1354	TRF	Tandem_Repeat	123395	123911	529	+	.	.
scaffold1354	subtractBed	intrn	125490	125887	.	+	.	Parent=CGI_10014930;
	scaffold1354	TRF	Tandem_Repeat	125483	125887	222	+	.	.
scaffold1354	subtractBed	intrn	125800	126122	.	+	.	Parent=CGI_10014930;
	scaffold1354	TRF	Tandem_Repeat	125800	126122	448	+	.	.
scaffold1354	subtractBed	intrn	125490	126158	.	+	.	Parent=CGI_10014930;
	scaffold1354	TRF	Tandem_Repeat	125483	126158	304	+	.	.
scaffold1354	subtractBed	intrn	134127	134245	.	-	.	Parent=CGI_10014931;
	scaffold1354	TRF	Tandem_Repeat	134127	134245	130	+	.	.
scaffold1354	subtractBed	intrn	146571	146604	.	-	.	Parent=CGI_10014932;
	scaffold1354	TRF	Tandem_Repeat	146571	146604	50	+	.	.
scaffold1354	subtractBed	intrn	170733	170828	.	-	.	Parent=CGI_10014934;
	scaffold1354	WUBlastX	LINE_L1-Tx1	170733	170828	32	-	.	.
scaffold1354	subtractBed	intrn	171709	174201	.	-	.	Parent=CGI_10014934;
	scaffold1354	WUBlastX	LINE_L1-Tx1	171709	174201	1162	-	.	.
scaffold1354	subtractBed	intrn	174154	174259	.	-	.	Parent=CGI_10014934;
	scaffold1354	WUBlastX	LINE_L2	174154	174267	21	-	.	.
scaffold1354	subtractBed	intrn	174082	174249	.	-	.	Parent=CGI_10014934;
	scaffold1354	WUBlastX	LINE_L2	174082	174249	31	-	.	.
scaffold1354	subtractBed	intrn	175812	176026	.	-	.	Parent=CGI_10014934;
	scaffold1354	TRF	Tandem_Repeat	175812	176026	134	+	.	.
scaffold1354	subtractBed	intrn	174521	174682	.	-	.	Parent=CGI_10014934;
	scaffold1354	WUBlastX	LINE_DRE	174521	174682	26	-	.	.
scaffold1354	subtractBed	intrn	179822	179860	.	-	.	Parent=CGI_10014935;
	scaffold1354	TRF	Tandem_Repeat	179822	179860	78	+	.	.
scaffold1354	subtractBed	intrn	187339	188128	.	+	.	Parent=CGI_10014936;
	scaffold1354	TRF	Tandem_Repeat	187339	188128	1119	+	.	.
scaffold1354	subtractBed	intrn	187850	188006	.	+	.	Parent=CGI_10014936;
	scaffold1354	TRF	Tandem_Repeat	187850	188006	86	+	.	.
scaffold1354	subtractBed	intrn	187347	188230	.	+	.	Parent=CGI_10014936;
	scaffold1354	TRF	Tandem_Repeat	187347	188230	713	+	.	.
scaffold1354	subtractBed	intrn	203634	205069	.	-	.	Parent=CGI_10014937;
	scaffold1354	TRF	Tandem_Repeat	203634	205069	817	+	.	.
scaffold1354	subtractBed	intrn	203634	205069	.	-	.	Parent=CGI_10014937;
	scaffold1354	TRF	Tandem_Repeat	203634	205069	1018	+	.	.
scaffold1354	subtractBed	intrn	203634	205069	.	-	.	Parent=CGI_10014937;
	scaffold1354	TRF	Tandem_Repeat	203634	205069	954	+	.	.
scaffold1354	subtractBed	intrn	216075	216312	.	+	.	Parent=CGI_10014938;
	scaffold1354	TRF	Tandem_Repeat	216075	216312	458	+	.	.
scaffold1354	subtractBed	intrn	219308	219594	.	+	.	Parent=CGI_10014938;
	scaffold1354	TRF	Tandem_Repeat	219308	219594	439	+	.	.
scaffold1354	subtractBed	intrn	219308	219594	.	+	.	Parent=CGI_10014938;
	scaffold1354	TRF	Tandem_Repeat	219308	219594	448	+	.	.
scaffold1354	subtractBed	intrn	230047	231132	.	+	.	Parent=CGI_10014938;
	scaffold1354	TRF	Tandem_Repeat	230047	231132	1310	+	.	.
scaffold1354	subtractBed	intrn	238983	239222	.	+	.	Parent=CGI_10014938;
	scaffold1354	TRF	Tandem_Repeat	238983	239222	426	+	.	.
scaffold1354	subtractBed	intrn	275246	275274	.	-	.	Parent=CGI_10014939;
	scaffold1354	TRF	Tandem_Repeat	275246	275274	58	+	.	.
scaffold1354	subtractBed	intrn	276018	277046	.	-	.	Parent=CGI_10014939;
	scaffold1354	TRF	Tandem_Repeat	276018	277071	591	+	.	.
scaffold1354	subtractBed	intrn	349429	350464	.	+	.	Parent=CGI_10014943;
	scaffold1354	TRF	Tandem_Repeat	349429	350464	694	+	.	.
scaffold1354	subtractBed	intrn	349583	350470	.	+	.	Parent=CGI_10014943;
	scaffold1354	TRF	Tandem_Repeat	349583	350470	711	+	.	.
scaffold1354	subtractBed	intrn	353759	353798	.	+	.	Parent=CGI_10014943;
	scaffold1354	TRF	Tandem_Repeat	353759	353798	53	+	.	.
scaffold1354	subtractBed	intrn	370898	370944	.	+	.	Parent=CGI_10014945;
	scaffold1354	TRF	Tandem_Repeat	370898	370944	94	+	.	.
scaffold1357	subtractBed	intrn	36445	36526	.	-	.	Parent=CGI_10004035;
	scaffold1357	TRF	Tandem_Repeat	36445	36526	58	+	.	.
scaffold1357	subtractBed	intrn	36445	36639	.	-	.	Parent=CGI_10004035;
	scaffold1357	TRF	Tandem_Repeat	36445	36639	53	+	.	.
scaffold1357	subtractBed	intrn	74476	74534	.	-	.	Parent=CGI_10004037;
	scaffold1357	TRF	Tandem_Repeat	74476	74534	118	+	.	.
scaffold1357	subtractBed	intrn	79432	79560	.	-	.	Parent=CGI_10004038;
	scaffold1357	WUBlastX	DNA_Maverick	79432	79560	51	-	.	.
scaffold1357	subtractBed	intrn	79560	80312	.	-	.	Parent=CGI_10004038;
	scaffold1357	WUBlastX	DNA_Maverick	79560	80312	384	-	.	.
scaffold1358	subtractBed	intrn	92152	92200	.	+	.	Parent=CGI_10011354;
	scaffold1358	TRF	Tandem_Repeat	92152	92200	55	+	.	.
scaffold1358	subtractBed	intrn	92152	92200	.	+	.	Parent=CGI_10011354;
	scaffold1358	TRF	Tandem_Repeat	92152	92200	55	+	.	.
scaffold1358	subtractBed	intrn	92152	92200	.	-	.	Parent=CGI_10011355;
	scaffold1358	TRF	Tandem_Repeat	92152	92200	55	+	.	.
scaffold1358	subtractBed	intrn	92152	92200	.	-	.	Parent=CGI_10011355;
	scaffold1358	TRF	Tandem_Repeat	92152	92200	55	+	.	.
scaffold1358	subtractBed	intrn	98464	98496	.	-	.	Parent=CGI_10011355;
	scaffold1358	TRF	Tandem_Repeat	98464	98496	66	+	.	.
scaffold1358	subtractBed	intrn	98494	98520	.	-	.	Parent=CGI_10011355;
	scaffold1358	TRF	Tandem_Repeat	98494	98520	54	+	.	.
scaffold1358	subtractBed	intrn	110170	110602	.	+	.	Parent=CGI_10011356;
	scaffold1358	TRF	Tandem_Repeat	110170	110602	329	+	.	.
scaffold1358	subtractBed	intrn	110170	110780	.	+	.	Parent=CGI_10011356;
	scaffold1358	TRF	Tandem_Repeat	110170	110780	448	+	.	.
scaffold1358	subtractBed	intrn	110612	111361	.	+	.	Parent=CGI_10011356;
	scaffold1358	TRF	Tandem_Repeat	110612	111361	290	+	.	.
scaffold1358	subtractBed	intrn	110170	111361	.	+	.	Parent=CGI_10011356;
	scaffold1358	TRF	Tandem_Repeat	110170	111361	424	+	.	.
scaffold1358	subtractBed	intrn	269723	269774	.	-	.	Parent=CGI_10011359;
	scaffold1358	TRF	Tandem_Repeat	269723	269774	104	+	.	.
scaffold1359	subtractBed	intrn	7893	7930	.	-	.	Parent=CGI_10013230;
	scaffold1359	TRF	Tandem_Repeat	7893	7930	76	+	.	.
scaffold1359	subtractBed	intrn	42758	42802	.	-	.	Parent=CGI_10013231;
	scaffold1359	TRF	Tandem_Repeat	42758	42802	90	+	.	.
scaffold1359	subtractBed	intrn	54258	54301	.	-	.	Parent=CGI_10013232;
	scaffold1359	TRF	Tandem_Repeat	54258	54301	54	+	.	.
scaffold1359	subtractBed	intrn	56085	56160	.	-	.	Parent=CGI_10013232;
	scaffold1359	TRF	Tandem_Repeat	56085	56160	143	+	.	.
scaffold1359	subtractBed	intrn	74351	74442	.	+	.	Parent=CGI_10013233;
	scaffold1359	TRF	Tandem_Repeat	74351	74442	157	+	.	.
scaffold1359	subtractBed	intrn	135730	135781	.	+	.	Parent=CGI_10013235;
	scaffold1359	TRF	Tandem_Repeat	135730	135781	104	+	.	.
scaffold1359	subtractBed	intrn	138137	138168	.	-	.	Parent=CGI_10013236;
	scaffold1359	TRF	Tandem_Repeat	138137	138168	64	+	.	.
scaffold1359	subtractBed	intrn	144145	144203	.	-	.	Parent=CGI_10013236;
	scaffold1359	TRF	Tandem_Repeat	144145	144203	52	+	.	.
scaffold1359	subtractBed	intrn	144116	144703	.	-	.	Parent=CGI_10013236;
	scaffold1359	TRF	Tandem_Repeat	144116	144703	741	+	.	.
scaffold1359	subtractBed	intrn	143042	143266	.	-	.	Parent=CGI_10013236;
	scaffold1359	WUBlastX	LINE_RTE-X	143042	143266	66	+	.	.
scaffold1359	subtractBed	intrn	145941	146133	.	-	.	Parent=CGI_10013236;
	scaffold1359	TRF	Tandem_Repeat	145941	146133	293	+	.	.
scaffold1359	subtractBed	intrn	146147	146201	.	-	.	Parent=CGI_10013236;
	scaffold1359	TRF	Tandem_Repeat	146147	146201	53	+	.	.
scaffold1359	subtractBed	intrn	176474	176517	.	-	.	Parent=CGI_10013237;
	scaffold1359	TRF	Tandem_Repeat	176474	176517	88	+	.	.
scaffold1359	subtractBed	intrn	231155	231372	.	-	.	Parent=CGI_10013244;
	scaffold1359	WUBlastX	DNA_IS4EU	231114	231992	27	+	.	.
scaffold1359	subtractBed	intrn	283225	283349	.	-	.	Parent=CGI_10013248;
	scaffold1359	TRF	Tandem_Repeat	283225	283353	240	+	.	.
scaffold1359	subtractBed	intrn	311682	311986	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	311682	311986	496	+	.	.
scaffold1359	subtractBed	intrn	312664	313103	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	312664	313103	619	+	.	.
scaffold1359	subtractBed	intrn	313310	313423	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	313310	313423	93	+	.	.
scaffold1359	subtractBed	intrn	315934	316227	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	315934	316227	518	+	.	.
scaffold1359	subtractBed	intrn	316852	316908	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	316852	316908	87	+	.	.
scaffold1359	subtractBed	intrn	317605	317792	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	317605	317792	193	+	.	.
scaffold1359	subtractBed	intrn	334458	334513	.	-	.	Parent=CGI_10013249;
	scaffold1359	TRF	Tandem_Repeat	334458	334513	98	+	.	.
scaffold1359	subtractBed	intrn	345148	345290	.	-	.	Parent=CGI_10013250;
	scaffold1359	TRF	Tandem_Repeat	345148	345290	171	+	.	.
scaffold1359	subtractBed	intrn	345095	345354	.	-	.	Parent=CGI_10013250;
	scaffold1359	TRF	Tandem_Repeat	345095	345354	61	+	.	.
scaffold1359	subtractBed	intrn	345407	345519	.	-	.	Parent=CGI_10013250;
	scaffold1359	TRF	Tandem_Repeat	345407	345519	109	+	.	.
scaffold1359	subtractBed	intrn	345506	345630	.	-	.	Parent=CGI_10013250;
	scaffold1359	TRF	Tandem_Repeat	345506	345630	110	+	.	.
scaffold1359	subtractBed	intrn	345534	345630	.	-	.	Parent=CGI_10013250;
	scaffold1359	TRF	Tandem_Repeat	345534	345630	115	+	.	.
scaffold1360	subtractBed	intrn	39707	40006	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	39707	40006	163	-	.	.
scaffold1360	subtractBed	intrn	40089	40307	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	40089	40307	97	-	.	.
scaffold1360	subtractBed	intrn	40305	40769	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	40305	40769	285	-	.	.
scaffold1360	subtractBed	intrn	40822	41097	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	40822	41097	104	-	.	.
scaffold1360	subtractBed	intrn	40203	40778	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	40203	40778	144	-	.	.
scaffold1360	subtractBed	intrn	39710	40093	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	39710	40093	50	-	.	.
scaffold1360	subtractBed	intrn	40846	41184	.	+	.	Parent=CGI_10022624;
	scaffold1360	WUBlastX	LINE_RTE-BovB	40846	41184	44	-	.	.
scaffold1360	subtractBed	intrn	100230	100771	.	+	.	Parent=CGI_10022625;
	scaffold1360	TRF	Tandem_Repeat	100230	100771	604	+	.	.
scaffold1360	subtractBed	intrn	110638	110935	.	+	.	Parent=CGI_10022626;
	scaffold1360	TRF	Tandem_Repeat	110638	110935	501	+	.	.
scaffold1360	subtractBed	intrn	116026	116073	.	+	.	Parent=CGI_10022626;
	scaffold1360	TRF	Tandem_Repeat	116026	116073	78	+	.	.
scaffold1360	subtractBed	intrn	114528	115020	.	+	.	Parent=CGI_10022626;
	scaffold1360	TRF	Tandem_Repeat	114528	115020	842	+	.	.
scaffold1360	subtractBed	intrn	114554	115014	.	+	.	Parent=CGI_10022626;
	scaffold1360	TRF	Tandem_Repeat	114554	115014	276	+	.	.
scaffold1360	subtractBed	intrn	165853	165916	.	-	.	Parent=CGI_10022634;
	scaffold1360	TRF	Tandem_Repeat	165853	165916	128	+	.	.
scaffold1360	subtractBed	intrn	167863	168076	.	-	.	Parent=CGI_10022634;
	scaffold1360	TRF	Tandem_Repeat	167863	168076	295	+	.	.
scaffold1360	subtractBed	intrn	168440	168960	.	-	.	Parent=CGI_10022634;
	scaffold1360	TRF	Tandem_Repeat	168440	168960	272	+	.	.
scaffold1360	subtractBed	intrn	168440	168964	.	-	.	Parent=CGI_10022634;
	scaffold1360	TRF	Tandem_Repeat	168440	168964	316	+	.	.
scaffold1360	subtractBed	intrn	176246	176359	.	-	.	Parent=CGI_10022635;
	scaffold1360	TRF	Tandem_Repeat	176246	176359	102	+	.	.
scaffold1360	subtractBed	intrn	196831	196859	.	+	.	Parent=CGI_10022636;
	scaffold1360	TRF	Tandem_Repeat	196831	196859	58	+	.	.
scaffold1360	subtractBed	intrn	200400	200432	.	+	.	Parent=CGI_10022636;
	scaffold1360	TRF	Tandem_Repeat	200400	200432	66	+	.	.
scaffold1360	subtractBed	intrn	200660	200689	.	+	.	Parent=CGI_10022636;
	scaffold1360	TRF	Tandem_Repeat	200660	200689	60	+	.	.
scaffold1360	subtractBed	intrn	206307	206354	.	+	.	Parent=CGI_10022636;
	scaffold1360	TRF	Tandem_Repeat	206307	206354	87	+	.	.
scaffold1360	subtractBed	intrn	207503	207532	.	+	.	Parent=CGI_10022636;
	scaffold1360	TRF	Tandem_Repeat	207503	207532	60	+	.	.
scaffold1360	subtractBed	intrn	200400	200432	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	200400	200432	66	+	.	.
scaffold1360	subtractBed	intrn	200660	200689	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	200660	200689	60	+	.	.
scaffold1360	subtractBed	intrn	206307	206354	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	206307	206354	87	+	.	.
scaffold1360	subtractBed	intrn	207503	207532	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	207503	207532	60	+	.	.
scaffold1360	subtractBed	intrn	210892	211130	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	210892	211130	359	+	.	.
scaffold1360	subtractBed	intrn	211248	212073	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	211248	212073	716	+	.	.
scaffold1360	subtractBed	intrn	220647	220686	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	220647	220686	53	+	.	.
scaffold1360	subtractBed	intrn	220717	223053	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	220717	223053	2380	+	.	.
scaffold1360	subtractBed	intrn	220717	223014	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	220717	223014	2843	+	.	.
scaffold1360	subtractBed	intrn	221675	221730	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	221675	221730	67	+	.	.
scaffold1360	subtractBed	intrn	224553	225640	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	224553	225640	1675	+	.	.
scaffold1360	subtractBed	intrn	230834	231297	.	-	.	Parent=CGI_10022637;
	scaffold1360	TRF	Tandem_Repeat	230834	231297	811	+	.	.
scaffold1360	subtractBed	intrn	254786	254841	.	-	.	Parent=CGI_10022641;
	scaffold1360	TRF	Tandem_Repeat	254786	254841	67	+	.	.
scaffold1360	subtractBed	intrn	267761	268395	.	+	.	Parent=CGI_10022642;
	scaffold1360	TRF	Tandem_Repeat	267761	268395	792	+	.	.
scaffold1360	subtractBed	intrn	267761	268394	.	+	.	Parent=CGI_10022642;
	scaffold1360	TRF	Tandem_Repeat	267761	268394	877	+	.	.
scaffold1360	subtractBed	intrn	288777	289046	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	288777	289046	330	+	.	.
scaffold1360	subtractBed	intrn	290187	290330	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	290187	290330	85	+	.	.
scaffold1360	subtractBed	intrn	290468	290731	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	290468	290731	492	+	.	.
scaffold1360	subtractBed	intrn	290499	290716	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	290499	290716	190	+	.	.
scaffold1360	subtractBed	intrn	293124	293148	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	293124	293148	50	+	.	.
scaffold1360	subtractBed	intrn	298226	298282	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	298226	298282	114	+	.	.
scaffold1360	subtractBed	intrn	298381	298420	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	298381	298420	80	+	.	.
scaffold1360	subtractBed	intrn	299376	299413	.	+	.	Parent=CGI_10022643;
	scaffold1360	TRF	Tandem_Repeat	299376	299413	51	+	.	.
scaffold1360	subtractBed	intrn	304734	304796	.	-	.	Parent=CGI_10022645;
	scaffold1360	TRF	Tandem_Repeat	304734	304796	119	+	.	.
scaffold1360	subtractBed	intrn	312393	312429	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	312393	312429	74	+	.	.
scaffold1360	subtractBed	intrn	315387	315438	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	315387	315438	104	+	.	.
scaffold1360	subtractBed	intrn	319117	319180	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	319117	319180	128	+	.	.
scaffold1360	subtractBed	intrn	321855	321901	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	321855	321901	94	+	.	.
scaffold1360	subtractBed	intrn	322497	322553	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	322497	322553	114	+	.	.
scaffold1360	subtractBed	intrn	325109	325182	.	-	.	Parent=CGI_10022646;
	scaffold1360	TRF	Tandem_Repeat	325109	325182	139	+	.	.
scaffold1360	subtractBed	intrn	442677	442726	.	+	.	Parent=CGI_10022655;
	scaffold1360	TRF	Tandem_Repeat	442677	442726	66	+	.	.
scaffold1360	subtractBed	intrn	519219	519255	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	519219	519255	74	+	.	.
scaffold1360	subtractBed	intrn	519828	519873	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	519828	519873	58	+	.	.
scaffold1360	subtractBed	intrn	522736	522812	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	522736	522812	70	+	.	.
scaffold1360	subtractBed	intrn	522733	522808	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	522733	522808	62	+	.	.
scaffold1360	subtractBed	intrn	528902	528933	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	528902	528933	55	+	.	.
scaffold1360	subtractBed	intrn	529489	529525	.	-	.	Parent=CGI_10022657;
	scaffold1360	TRF	Tandem_Repeat	529489	529525	65	+	.	.
scaffold1360	subtractBed	intrn	560408	560435	.	+	.	Parent=CGI_10022659;
	scaffold1360	TRF	Tandem_Repeat	560408	560435	56	+	.	.
scaffold1360	subtractBed	intrn	566391	566859	.	+	.	Parent=CGI_10022659;
	scaffold1360	TRF	Tandem_Repeat	566391	566859	613	+	.	.
scaffold1360	subtractBed	intrn	566386	566875	.	+	.	Parent=CGI_10022659;
	scaffold1360	TRF	Tandem_Repeat	566386	566875	467	+	.	.
scaffold1360	subtractBed	intrn	694439	694499	.	-	.	Parent=CGI_10022667;
	scaffold1360	TRF	Tandem_Repeat	694439	694499	113	+	.	.
scaffold1360	subtractBed	intrn	709377	709673	.	-	.	Parent=CGI_10022667;
	scaffold1360	TRF	Tandem_Repeat	709377	709673	168	+	.	.
scaffold1360	subtractBed	intrn	709377	709677	.	-	.	Parent=CGI_10022667;
	scaffold1360	TRF	Tandem_Repeat	709377	709677	498	+	.	.
scaffold1360	subtractBed	intrn	715305	715353	.	-	.	Parent=CGI_10022667;
	scaffold1360	TRF	Tandem_Repeat	715305	715353	82	+	.	.
scaffold1360	subtractBed	intrn	716709	717038	.	-	.	Parent=CGI_10022667;
	scaffold1360	TRF	Tandem_Repeat	716709	717079	343	+	.	.
scaffold1360	subtractBed	intrn	734374	734733	.	+	.	Parent=CGI_10022670;
	scaffold1360	WUBlastX	LINE_RTE-X	734374	734751	144	-	.	.
scaffold1360	subtractBed	intrn	734404	734712	.	+	.	Parent=CGI_10022670;
	scaffold1360	WUBlastX	LINE_RTE-X	734404	734712	176	-	.	.
scaffold1360	subtractBed	intrn	734269	734706	.	+	.	Parent=CGI_10022670;
	scaffold1360	WUBlastX	LINE_RTE-X	734269	734706	141	-	.	.
scaffold1360	subtractBed	intrn	736941	736988	.	+	.	Parent=CGI_10022670;
	scaffold1360	TRF	Tandem_Repeat	736941	736988	87	+	.	.
scaffold1360	subtractBed	intrn	766987	767131	.	+	.	Parent=CGI_10022672;
	scaffold1360	TRF	Tandem_Repeat	766987	767131	121	+	.	.
scaffold1360	subtractBed	intrn	767439	767468	.	+	.	Parent=CGI_10022672;
	scaffold1360	TRF	Tandem_Repeat	767439	767468	60	+	.	.
scaffold1362	subtractBed	intrn	1295	1325	.	+	.	Parent=CGI_10023924;
	scaffold1362	TRF	Tandem_Repeat	1295	1325	62	+	.	.
scaffold1362	subtractBed	intrn	3803	3879	.	+	.	Parent=CGI_10023924;
	scaffold1362	TRF	Tandem_Repeat	3803	3879	154	+	.	.
scaffold1362	subtractBed	intrn	17270	17315	.	+	.	Parent=CGI_10023924;
	scaffold1362	TRF	Tandem_Repeat	17270	17315	83	+	.	.
scaffold1362	subtractBed	intrn	61548	61582	.	-	.	Parent=CGI_10023927;
	scaffold1362	TRF	Tandem_Repeat	61548	61582	70	+	.	.
scaffold1362	subtractBed	intrn	77133	77163	.	+	.	Parent=CGI_10023928;
	scaffold1362	TRF	Tandem_Repeat	77133	77163	62	+	.	.
scaffold1362	subtractBed	intrn	77611	77664	.	+	.	Parent=CGI_10023928;
	scaffold1362	TRF	Tandem_Repeat	77611	77664	108	+	.	.
scaffold1362	subtractBed	intrn	78405	78446	.	+	.	Parent=CGI_10023928;
	scaffold1362	TRF	Tandem_Repeat	78405	78446	84	+	.	.
scaffold1362	subtractBed	intrn	82063	82096	.	+	.	Parent=CGI_10023928;
	scaffold1362	TRF	Tandem_Repeat	82063	82096	50	+	.	.
scaffold1362	subtractBed	intrn	122134	122168	.	+	.	Parent=CGI_10023929;
	scaffold1362	TRF	Tandem_Repeat	122134	122168	70	+	.	.
scaffold1362	subtractBed	intrn	125555	125598	.	+	.	Parent=CGI_10023929;
	scaffold1362	TRF	Tandem_Repeat	125555	125598	88	+	.	.
scaffold1362	subtractBed	intrn	160728	160783	.	+	.	Parent=CGI_10023931;
	scaffold1362	TRF	Tandem_Repeat	160728	160783	76	+	.	.
scaffold1362	subtractBed	intrn	177027	177089	.	+	.	Parent=CGI_10023932;
	scaffold1362	TRF	Tandem_Repeat	177027	177089	110	+	.	.
scaffold1362	subtractBed	intrn	198881	202513	.	-	.	Parent=CGI_10023934;
	scaffold1362	WUBlastX	LTR_Gypsy	198881	202513	425	+	.	.
scaffold1362	subtractBed	intrn	200288	202450	.	-	.	Parent=CGI_10023934;
	scaffold1362	WUBlastX	LTR_Gypsy	200288	202450	1167	+	.	.
scaffold1362	subtractBed	intrn	201032	203992	.	-	.	Parent=CGI_10023934;
	scaffold1362	WUBlastX	LTR_Gypsy-Cigr	201032	203992	1285	+	.	.
scaffold1362	subtractBed	intrn	226030	226057	.	-	.	Parent=CGI_10023934;
	scaffold1362	TRF	Tandem_Repeat	226030	226057	56	+	.	.
scaffold1362	subtractBed	intrn	233568	233645	.	-	.	Parent=CGI_10023934;
	scaffold1362	TRF	Tandem_Repeat	233568	233645	138	+	.	.
scaffold1362	subtractBed	intrn	235641	235749	.	-	.	Parent=CGI_10023934;
	scaffold1362	TRF	Tandem_Repeat	235641	235749	119	+	.	.
scaffold1362	subtractBed	intrn	265140	265192	.	+	.	Parent=CGI_10023936;
	scaffold1362	TRF	Tandem_Repeat	265140	265192	106	+	.	.
scaffold1362	subtractBed	intrn	268052	268096	.	+	.	Parent=CGI_10023936;
	scaffold1362	TRF	Tandem_Repeat	268052	268096	90	+	.	.
scaffold1362	subtractBed	intrn	277433	277463	.	+	.	Parent=CGI_10023938;
	scaffold1362	TRF	Tandem_Repeat	277433	277463	62	+	.	.
scaffold1362	subtractBed	intrn	349974	349998	.	+	.	Parent=CGI_10023941;
	scaffold1362	TRF	Tandem_Repeat	349974	349998	50	+	.	.
scaffold1362	subtractBed	intrn	384806	384842	.	+	.	Parent=CGI_10023943;
	scaffold1362	TRF	Tandem_Repeat	384806	384842	74	+	.	.
scaffold1362	subtractBed	intrn	572964	572972	.	-	.	Parent=CGI_10023946;
	scaffold1362	WUBlastX	DNA_IS4EU	572964	573362	64	-	.	.
scaffold1362	subtractBed	intrn	572540	572548	.	-	.	Parent=CGI_10023946;
	scaffold1362	WUBlastX	DNA_IS4EU	572375	572548	65	-	.	.
scaffold1362	subtractBed	intrn	572964	572972	.	-	.	Parent=CGI_10023946;
	scaffold1362	WUBlastX	DNA_Kolobok-IS4	572964	573455	41	-	.	.
scaffold1362	subtractBed	intrn	573218	573362	.	-	.	Parent=CGI_10023946;
	scaffold1362	WUBlastX	DNA_IS4EU	572964	573362	64	-	.	.
scaffold1362	subtractBed	intrn	573218	573455	.	-	.	Parent=CGI_10023946;
	scaffold1362	WUBlastX	DNA_Kolobok-IS4	572964	573455	41	-	.	.
scaffold1362	subtractBed	intrn	590171	590196	.	-	.	Parent=CGI_10023947;
	scaffold1362	TRF	Tandem_Repeat	590171	590196	52	+	.	.
scaffold1362	subtractBed	intrn	602403	602431	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	602403	602431	58	+	.	.
scaffold1362	subtractBed	intrn	604106	604146	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	604106	604146	82	+	.	.
scaffold1362	subtractBed	intrn	607825	607990	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	607825	607990	113	+	.	.
scaffold1362	subtractBed	intrn	607821	607991	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	607821	607991	193	+	.	.
scaffold1362	subtractBed	intrn	607990	608126	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	607990	608126	103	+	.	.
scaffold1362	subtractBed	intrn	608012	608139	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	608012	608139	85	+	.	.
scaffold1362	subtractBed	intrn	613208	613245	.	+	.	Parent=CGI_10023949;
	scaffold1362	TRF	Tandem_Repeat	613208	613245	58	+	.	.
scaffold1362	subtractBed	intrn	613208	613245	.	-	.	Parent=CGI_10023950;
	scaffold1362	TRF	Tandem_Repeat	613208	613245	58	+	.	.
scaffold1362	subtractBed	intrn	622619	622858	.	-	.	Parent=CGI_10023952;
	scaffold1362	TRF	Tandem_Repeat	622619	622858	408	+	.	.
scaffold1362	subtractBed	intrn	700911	700938	.	-	.	Parent=CGI_10023954;
	scaffold1362	TRF	Tandem_Repeat	700911	700938	56	+	.	.
scaffold1362	subtractBed	intrn	698106	698309	.	-	.	Parent=CGI_10023954;
	scaffold1362	WUBlastX	LINE_RTE-X	698106	698309	75	-	.	.
scaffold1362	subtractBed	intrn	698681	698794	.	-	.	Parent=CGI_10023954;
	scaffold1362	WUBlastX	LINE_RTE-X	698681	698794	33	-	.	.
scaffold1362	subtractBed	intrn	698043	698309	.	-	.	Parent=CGI_10023954;
	scaffold1362	WUBlastX	LINE_RTE-X	698043	698309	24	-	.	.
scaffold1362	subtractBed	intrn	698354	698794	.	-	.	Parent=CGI_10023954;
	scaffold1362	WUBlastX	LINE_RTE-X	698354	698794	22	-	.	.
scaffold1362	subtractBed	intrn	796951	796992	.	+	.	Parent=CGI_10023962;
	scaffold1362	TRF	Tandem_Repeat	796951	796992	84	+	.	.
scaffold1362	subtractBed	intrn	800175	800225	.	+	.	Parent=CGI_10023962;
	scaffold1362	TRF	Tandem_Repeat	800175	800225	102	+	.	.
scaffold1362	subtractBed	intrn	832190	832219	.	+	.	Parent=CGI_10023966;
	scaffold1362	TRF	Tandem_Repeat	832190	832219	60	+	.	.
scaffold1362	subtractBed	intrn	867768	869962	.	+	.	Parent=CGI_10023968;
	scaffold1362	TRF	Tandem_Repeat	867768	869962	3195	+	.	.
scaffold1362	subtractBed	intrn	867768	869962	.	+	.	Parent=CGI_10023968;
	scaffold1362	TRF	Tandem_Repeat	867768	869962	3059	+	.	.
scaffold1366	subtractBed	intrn	13333	13586	.	-	.	Parent=CGI_10012280;
	scaffold1366	TRF	Tandem_Repeat	13333	13586	355	+	.	.
scaffold1366	subtractBed	intrn	46332	46388	.	-	.	Parent=CGI_10012284;
	scaffold1366	TRF	Tandem_Repeat	46332	46388	114	+	.	.
scaffold1366	subtractBed	intrn	48053	48329	.	-	.	Parent=CGI_10012284;
	scaffold1366	TRF	Tandem_Repeat	48053	48329	314	+	.	.
scaffold1366	subtractBed	intrn	48339	48879	.	-	.	Parent=CGI_10012284;
	scaffold1366	TRF	Tandem_Repeat	48339	48879	645	+	.	.
scaffold1366	subtractBed	intrn	49327	50908	.	-	.	Parent=CGI_10012284;
	scaffold1366	TRF	Tandem_Repeat	49327	50908	2239	+	.	.
scaffold1366	subtractBed	intrn	49041	49317	.	-	.	Parent=CGI_10012284;
	scaffold1366	TRF	Tandem_Repeat	49041	49317	314	+	.	.
scaffold1366	subtractBed	intrn	67347	67382	.	+	.	Parent=CGI_10012287;
	scaffold1366	TRF	Tandem_Repeat	67347	67382	54	+	.	.
scaffold1366	subtractBed	intrn	67610	67650	.	+	.	Parent=CGI_10012287;
	scaffold1366	TRF	Tandem_Repeat	67610	67650	55	+	.	.
scaffold1366	subtractBed	intrn	67607	67662	.	+	.	Parent=CGI_10012287;
	scaffold1366	TRF	Tandem_Repeat	67607	67662	67	+	.	.
scaffold1366	subtractBed	intrn	67607	67662	.	+	.	Parent=CGI_10012287;
	scaffold1366	TRF	Tandem_Repeat	67607	67662	96	+	.	.
scaffold1366	subtractBed	intrn	82838	83355	.	+	.	Parent=CGI_10012289;
	scaffold1366	TRF	Tandem_Repeat	82838	83355	778	+	.	.
scaffold1366	subtractBed	intrn	109453	109809	.	+	.	Parent=CGI_10012291;
	scaffold1366	WUBlastX	LINE_RTE-BovB	109453	109809	39	-	.	.
scaffold1366	subtractBed	intrn	115373	115446	.	+	.	Parent=CGI_10012291;
	scaffold1366	TRF	Tandem_Repeat	115373	115446	134	+	.	.
scaffold1366	subtractBed	intrn	118519	118885	.	+	.	Parent=CGI_10012291;
	scaffold1366	TRF	Tandem_Repeat	118519	118885	322	+	.	.
scaffold1366	subtractBed	intrn	137450	137752	.	-	.	Parent=CGI_10012293;
	scaffold1366	WUBlastX	LINE_RTE-X	137450	137752	29	-	.	.
scaffold1366	subtractBed	intrn	137558	137770	.	-	.	Parent=CGI_10012293;
	scaffold1366	WUBlastX	LINE_RTE-X	137558	137770	68	-	.	.
scaffold1366	subtractBed	intrn	163988	164344	.	+	.	Parent=CGI_10012296;
	scaffold1366	WUBlastX	DNA_Crypton	163988	164344	122	-	.	.
scaffold1366	subtractBed	intrn	163773	163982	.	+	.	Parent=CGI_10012296;
	scaffold1366	WUBlastX	DNA_Crypton	163773	163982	46	-	.	.
scaffold1366	subtractBed	intrn	174417	174445	.	+	.	Parent=CGI_10012296;
	scaffold1366	TRF	Tandem_Repeat	174417	174445	58	+	.	.
scaffold1366	subtractBed	intrn	179619	180276	.	-	.	Parent=CGI_10012297;
	scaffold1366	TRF	Tandem_Repeat	179619	180276	432	+	.	.
scaffold1366	subtractBed	intrn	179732	180261	.	-	.	Parent=CGI_10012297;
	scaffold1366	TRF	Tandem_Repeat	179732	180261	351	+	.	.
scaffold1366	subtractBed	intrn	179977	180269	.	-	.	Parent=CGI_10012297;
	scaffold1366	TRF	Tandem_Repeat	179977	180269	320	+	.	.
scaffold1366	subtractBed	intrn	197388	197435	.	-	.	Parent=CGI_10012298;
	scaffold1366	TRF	Tandem_Repeat	197388	197435	51	+	.	.
scaffold1366	subtractBed	intrn	231286	231337	.	-	.	Parent=CGI_10012303;
	scaffold1366	TRF	Tandem_Repeat	231286	231337	104	+	.	.
scaffold1366	subtractBed	intrn	252807	252832	.	-	.	Parent=CGI_10012304;
	scaffold1366	TRF	Tandem_Repeat	252807	252832	52	+	.	.
scaffold1366	subtractBed	intrn	255055	255316	.	-	.	Parent=CGI_10012304;
	scaffold1366	TRF	Tandem_Repeat	255055	255447	535	+	.	.
scaffold1366	subtractBed	intrn	255382	255447	.	-	.	Parent=CGI_10012304;
	scaffold1366	TRF	Tandem_Repeat	255055	255447	535	+	.	.
scaffold1368	subtractBed	intrn	12650	12700	.	+	.	Parent=CGI_10002236;
	scaffold1368	TRF	Tandem_Repeat	12650	12700	93	+	.	.
scaffold1371	subtractBed	intrn	28977	29045	.	+	.	Parent=CGI_10005455;
	scaffold1371	TRF	Tandem_Repeat	28977	29045	79	+	.	.
scaffold1371	subtractBed	intrn	29688	29923	.	+	.	Parent=CGI_10005455;
	scaffold1371	TRF	Tandem_Repeat	29688	29923	429	+	.	.
scaffold1371	subtractBed	intrn	34544	34650	.	+	.	Parent=CGI_10005456;
	scaffold1371	TRF	Tandem_Repeat	34544	34650	178	+	.	.
scaffold1371	subtractBed	intrn	34966	35578	.	+	.	Parent=CGI_10005456;
	scaffold1371	TRF	Tandem_Repeat	34966	35578	626	+	.	.
scaffold1371	subtractBed	intrn	45696	45938	.	+	.	Parent=CGI_10005457;
	scaffold1371	TRF	Tandem_Repeat	45661	45938	502	+	.	.
scaffold1372	subtractBed	intrn	52500	52583	.	+	.	Parent=CGI_10015661;
	scaffold1372	TRF	Tandem_Repeat	52500	52583	168	+	.	.
scaffold1372	subtractBed	intrn	53903	53937	.	+	.	Parent=CGI_10015661;
	scaffold1372	TRF	Tandem_Repeat	53903	53937	52	+	.	.
scaffold1372	subtractBed	intrn	110419	110443	.	-	.	Parent=CGI_10015663;
	scaffold1372	TRF	Tandem_Repeat	110419	110443	50	+	.	.
scaffold1372	subtractBed	intrn	109453	109830	.	-	.	Parent=CGI_10015663;
	scaffold1372	WUBlastX	LINE_RTE-X	109453	109830	62	+	.	.
scaffold1372	subtractBed	intrn	109826	110110	.	-	.	Parent=CGI_10015663;
	scaffold1372	WUBlastX	LINE_RTE-X	109826	110110	92	+	.	.
scaffold1372	subtractBed	intrn	109844	110014	.	-	.	Parent=CGI_10015663;
	scaffold1372	WUBlastX	LINE_RTE-X	109844	110014	97	+	.	.
scaffold1372	subtractBed	intrn	270233	270600	.	-	.	Parent=CGI_10015667;
	scaffold1372	TRF	Tandem_Repeat	270233	270600	576	+	.	.
scaffold1372	subtractBed	intrn	274345	274395	.	-	.	Parent=CGI_10015667;
	scaffold1372	TRF	Tandem_Repeat	274345	274395	102	+	.	.
scaffold1372	subtractBed	intrn	274715	274755	.	-	.	Parent=CGI_10015667;
	scaffold1372	TRF	Tandem_Repeat	274715	274755	73	+	.	.
scaffold1372	subtractBed	intrn	293540	293585	.	-	.	Parent=CGI_10015668;
	scaffold1372	TRF	Tandem_Repeat	293540	293585	92	+	.	.
scaffold1372	subtractBed	intrn	294685	294750	.	-	.	Parent=CGI_10015668;
	scaffold1372	TRF	Tandem_Repeat	294685	294750	132	+	.	.
scaffold1372	subtractBed	intrn	305266	305301	.	-	.	Parent=CGI_10015668;
	scaffold1372	TRF	Tandem_Repeat	305266	305301	72	+	.	.
scaffold1372	subtractBed	intrn	342526	342579	.	+	.	Parent=CGI_10015669;
	scaffold1372	TRF	Tandem_Repeat	342526	342579	108	+	.	.
scaffold1372	subtractBed	intrn	344448	344483	.	+	.	Parent=CGI_10015669;
	scaffold1372	TRF	Tandem_Repeat	344448	344483	72	+	.	.
scaffold1372	subtractBed	intrn	347034	347095	.	+	.	Parent=CGI_10015670;
	scaffold1372	TRF	Tandem_Repeat	347034	347095	88	+	.	.
scaffold1372	subtractBed	intrn	347029	347088	.	+	.	Parent=CGI_10015670;
	scaffold1372	TRF	Tandem_Repeat	347029	347088	84	+	.	.
scaffold1372	subtractBed	intrn	347119	347907	.	+	.	Parent=CGI_10015670;
	scaffold1372	TRF	Tandem_Repeat	347119	347907	1180	+	.	.
scaffold1372	subtractBed	intrn	350567	350792	.	+	.	Parent=CGI_10015670;
	scaffold1372	TRF	Tandem_Repeat	350567	350792	196	+	.	.
scaffold1372	subtractBed	intrn	351040	351227	.	+	.	Parent=CGI_10015670;
	scaffold1372	TRF	Tandem_Repeat	351040	351227	209	+	.	.
scaffold1372	subtractBed	intrn	370978	371062	.	-	.	Parent=CGI_10015671;
	scaffold1372	TRF	Tandem_Repeat	370978	371062	170	+	.	.
scaffold1373	subtractBed	intrn	4984	5246	.	-	.	Parent=CGI_10007903;
	scaffold1373	TRF	Tandem_Repeat	4984	5246	384	+	.	.
scaffold1373	subtractBed	intrn	1285	1884	.	-	.	Parent=CGI_10007903;
	scaffold1373	WUBlastX	LINE_RTE-X	1285	1884	147	+	.	.
scaffold1373	subtractBed	intrn	1297	2019	.	-	.	Parent=CGI_10007903;
	scaffold1373	WUBlastX	LINE_RTE-X	1297	2019	107	+	.	.
scaffold1373	subtractBed	intrn	20958	22133	.	-	.	Parent=CGI_10007904;
	scaffold1373	WUBlastX	LTR_Pao	20958	22133	1135	+	.	.
scaffold1373	subtractBed	intrn	29613	29682	.	-	.	Parent=CGI_10007904;
	scaffold1373	TRF	Tandem_Repeat	29613	29682	78	+	.	.
scaffold1373	subtractBed	intrn	29773	29804	.	-	.	Parent=CGI_10007904;
	scaffold1373	TRF	Tandem_Repeat	29773	29804	55	+	.	.
scaffold1373	subtractBed	intrn	29889	29965	.	-	.	Parent=CGI_10007904;
	scaffold1373	TRF	Tandem_Repeat	29889	29965	136	+	.	.
scaffold1373	subtractBed	intrn	20958	22133	.	+	.	Parent=CGI_10007905;
	scaffold1373	WUBlastX	LTR_Pao	20958	22133	1135	+	.	.
scaffold1373	subtractBed	intrn	56110	56146	.	+	.	Parent=CGI_10007907;
	scaffold1373	TRF	Tandem_Repeat	56110	56146	74	+	.	.
scaffold1373	subtractBed	intrn	61144	61187	.	+	.	Parent=CGI_10007907;
	scaffold1373	TRF	Tandem_Repeat	61144	61187	88	+	.	.
scaffold1373	subtractBed	intrn	106291	106406	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	106291	106406	68	+	.	.
scaffold1373	subtractBed	intrn	106217	106671	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	106216	106671	736	+	.	.
scaffold1373	subtractBed	intrn	107805	107890	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	107805	107890	127	+	.	.
scaffold1373	subtractBed	intrn	107805	107890	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	107805	107890	145	+	.	.
scaffold1373	subtractBed	intrn	111771	112071	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	111771	112071	239	+	.	.
scaffold1373	subtractBed	intrn	111714	112040	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	111699	112040	252	+	.	.
scaffold1373	subtractBed	intrn	114476	114859	.	+	.	Parent=CGI_10007909;
	scaffold1373	TRF	Tandem_Repeat	114457	114859	533	+	.	.
scaffold1373	subtractBed	intrn	166900	167478	.	-	.	Parent=CGI_10007913;
	scaffold1373	WUBlastX	LINE_Penelope	166900	167478	32	-	.	.
scaffold1374	subtractBed	intrn	61036	61386	.	+	.	Parent=CGI_10003419;
	scaffold1374	TRF	Tandem_Repeat	61036	61386	614	+	.	.
scaffold1374	subtractBed	intrn	62273	63043	.	+	.	Parent=CGI_10003419;
	scaffold1374	TRF	Tandem_Repeat	62273	63043	1114	+	.	.
scaffold1375	subtractBed	intrn	37318	37362	.	-	.	Parent=CGI_10003982;
	scaffold1375	TRF	Tandem_Repeat	37318	37362	90	+	.	.
scaffold1375	subtractBed	intrn	37957	38074	.	-	.	Parent=CGI_10003982;
	scaffold1375	TRF	Tandem_Repeat	37957	38074	236	+	.	.
scaffold1375	subtractBed	intrn	43931	44586	.	+	.	Parent=CGI_10003983;
	scaffold1375	TRF	Tandem_Repeat	43899	44586	1054	+	.	.
scaffold1375	subtractBed	intrn	45062	45353	.	+	.	Parent=CGI_10003983;
	scaffold1375	TRF	Tandem_Repeat	45062	45353	344	+	.	.
scaffold1375	subtractBed	intrn	64259	65005	.	+	.	Parent=CGI_10003984;
	scaffold1375	TRF	Tandem_Repeat	64259	65005	984	+	.	.
scaffold1375	subtractBed	intrn	65900	66113	.	+	.	Parent=CGI_10003984;
	scaffold1375	TRF	Tandem_Repeat	65900	66113	74	+	.	.
scaffold1376	subtractBed	intrn	15590	15757	.	-	.	Parent=CGI_10002794;
	scaffold1376	WUBlastX	LINE_L2	15590	15757	61	+	.	.
scaffold1376	subtractBed	intrn	15775	16107	.	-	.	Parent=CGI_10002794;
	scaffold1376	WUBlastX	LINE_L2	15775	16107	129	+	.	.
scaffold1376	subtractBed	intrn	15557	15760	.	-	.	Parent=CGI_10002794;
	scaffold1376	WUBlastX	LINE_CR1-L2	15557	15760	32	+	.	.
scaffold1376	subtractBed	intrn	17259	17308	.	-	.	Parent=CGI_10002794;
	scaffold1376	TRF	Tandem_Repeat	17259	17308	100	+	.	.
scaffold1376	subtractBed	intrn	40654	40702	.	-	.	Parent=CGI_10002795;
	scaffold1376	TRF	Tandem_Repeat	40654	40702	53	+	.	.
scaffold1376	subtractBed	intrn	46029	46072	.	-	.	Parent=CGI_10002795;
	scaffold1376	TRF	Tandem_Repeat	46029	46072	88	+	.	.
scaffold1376	subtractBed	intrn	48156	48189	.	-	.	Parent=CGI_10002795;
	scaffold1376	TRF	Tandem_Repeat	48156	48189	50	+	.	.
scaffold1376	subtractBed	intrn	44465	44611	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_L1-Tx1	44465	44611	111	-	.	.
scaffold1376	subtractBed	intrn	45442	45498	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_R2	45442	45498	24	-	.	.
scaffold1376	subtractBed	intrn	42742	44460	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_L1-Tx1	42742	44460	429	-	.	.
scaffold1376	subtractBed	intrn	44462	44647	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_L1	44462	44647	108	-	.	.
scaffold1376	subtractBed	intrn	42655	42720	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_L1	42655	42720	20	-	.	.
scaffold1376	subtractBed	intrn	44465	44689	.	-	.	Parent=CGI_10002795;
	scaffold1376	WUBlastX	LINE_L1	44465	44689	46	-	.	.
scaffold1376	subtractBed	intrn	49687	49724	.	-	.	Parent=CGI_10002795;
	scaffold1376	TRF	Tandem_Repeat	49687	49724	58	+	.	.
scaffold1376	subtractBed	intrn	52004	52187	.	-	.	Parent=CGI_10002795;
	scaffold1376	TRF	Tandem_Repeat	52004	52187	172	+	.	.
scaffold1377	subtractBed	intrn	5107	5171	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	5107	5171	130	+	.	.
scaffold1377	subtractBed	intrn	13524	13578	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	13524	13578	65	+	.	.
scaffold1377	subtractBed	intrn	13522	13575	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	13522	13575	67	+	.	.
scaffold1377	subtractBed	intrn	14571	14611	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	14571	14611	82	+	.	.
scaffold1377	subtractBed	intrn	14733	14794	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	14733	14794	97	+	.	.
scaffold1377	subtractBed	intrn	7970	8221	.	+	.	Parent=CGI_10008617;
	scaffold1377	WUBlastX	LTR_DIRS	7970	8221	98	-	.	.
scaffold1377	subtractBed	intrn	8057	8824	.	+	.	Parent=CGI_10008617;
	scaffold1377	WUBlastX	LTR_DIRS	8057	8824	35	-	.	.
scaffold1377	subtractBed	intrn	7737	7973	.	+	.	Parent=CGI_10008617;
	scaffold1377	WUBlastX	LTR_DIRS	7737	7973	24	-	.	.
scaffold1377	subtractBed	intrn	18488	18532	.	+	.	Parent=CGI_10008617;
	scaffold1377	TRF	Tandem_Repeat	18488	18532	54	+	.	.
scaffold1377	subtractBed	intrn	127636	127800	.	+	.	Parent=CGI_10008621;
	scaffold1377	WUBlastX	DNA_Crypton	127636	127800	64	+	.	.
scaffold1377	subtractBed	intrn	127781	128170	.	+	.	Parent=CGI_10008621;
	scaffold1377	WUBlastX	DNA_Crypton	127781	128170	138	+	.	.
scaffold1377	subtractBed	intrn	128161	128331	.	+	.	Parent=CGI_10008621;
	scaffold1377	WUBlastX	DNA_Crypton	128161	128331	78	+	.	.
scaffold1377	subtractBed	intrn	135413	135445	.	+	.	Parent=CGI_10008621;
	scaffold1377	TRF	Tandem_Repeat	135413	135445	66	+	.	.
scaffold1377	subtractBed	intrn	146354	146531	.	+	.	Parent=CGI_10008621;
	scaffold1377	TRF	Tandem_Repeat	146354	146531	80	+	.	.
scaffold1377	subtractBed	intrn	148295	148423	.	+	.	Parent=CGI_10008621;
	scaffold1377	TRF	Tandem_Repeat	148295	148423	77	+	.	.
scaffold1377	subtractBed	intrn	148773	149675	.	+	.	Parent=CGI_10008621;
	scaffold1377	WUBlastX	LTR_Gypsy	148773	149675	244	+	.	.
scaffold1377	subtractBed	intrn	149001	149828	.	+	.	Parent=CGI_10008621;
	scaffold1377	WUBlastX	LTR_Gypsy	149001	149828	232	+	.	.
scaffold1377	subtractBed	intrn	186566	186871	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_IS4EU	186566	186871	96	+	.	.
scaffold1377	subtractBed	intrn	185293	185904	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_Kolobok-IS4	185293	185904	259	-	.	.
scaffold1377	subtractBed	intrn	185897	186310	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_Kolobok-IS4	185897	186310	48	-	.	.
scaffold1377	subtractBed	intrn	186856	187200	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_IS4EU	186856	187200	124	+	.	.
scaffold1377	subtractBed	intrn	186422	186883	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_IS4EU	186422	186883	53	+	.	.
scaffold1377	subtractBed	intrn	183339	183527	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_IS4EU	183339	183527	47	+	.	.
scaffold1377	subtractBed	intrn	183939	184094	.	+	.	Parent=CGI_10008623;
	scaffold1377	WUBlastX	DNA_IS4EU	183939	184094	33	+	.	.
scaffold1377	subtractBed	intrn	201851	201879	.	-	.	Parent=CGI_10008624;
	scaffold1377	TRF	Tandem_Repeat	201851	201879	58	+	.	.
scaffold1377	subtractBed	intrn	204850	204899	.	-	.	Parent=CGI_10008624;
	scaffold1377	TRF	Tandem_Repeat	204850	204899	57	+	.	.
scaffold1377	subtractBed	intrn	206166	206225	.	-	.	Parent=CGI_10008624;
	scaffold1377	TRF	Tandem_Repeat	206166	206225	75	+	.	.
scaffold138	subtractBed	intrn	2601	2648	.	+	.	Parent=CGI_10008423;
	scaffold138	TRF	Tandem_Repeat	2601	2648	87	+	.	.
scaffold138	subtractBed	intrn	3324	3365	.	+	.	Parent=CGI_10008423;
	scaffold138	TRF	Tandem_Repeat	3324	3365	84	+	.	.
scaffold138	subtractBed	intrn	12438	12485	.	+	.	Parent=CGI_10008423;
	scaffold138	TRF	Tandem_Repeat	12438	12485	96	+	.	.
scaffold138	subtractBed	intrn	28047	28466	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	28047	28466	42	-	.	.
scaffold138	subtractBed	intrn	26233	26649	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	26233	26649	96	-	.	.
scaffold138	subtractBed	intrn	26070	26207	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	26070	26207	37	-	.	.
scaffold138	subtractBed	intrn	27886	28029	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	27886	28029	90	-	.	.
scaffold138	subtractBed	intrn	26236	26535	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	26236	26535	140	-	.	.
scaffold138	subtractBed	intrn	28032	28358	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	28032	28358	63	-	.	.
scaffold138	subtractBed	intrn	27853	28038	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	27853	28038	85	-	.	.
scaffold138	subtractBed	intrn	26103	26240	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	26103	26240	40	-	.	.
scaffold138	subtractBed	intrn	27793	28029	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	27793	28029	57	-	.	.
scaffold138	subtractBed	intrn	28047	28154	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1	28047	28154	64	-	.	.
scaffold138	subtractBed	intrn	29658	29897	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	29658	29897	22	-	.	.
scaffold138	subtractBed	intrn	28319	28582	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1	28319	28582	41	-	.	.
scaffold138	subtractBed	intrn	29733	29906	.	+	.	Parent=CGI_10008423;
	scaffold138	WUBlastX	LINE_L1-Tx1	29733	29906	43	-	.	.
scaffold138	subtractBed	intrn	45463	46054	.	+	.	Parent=CGI_10008424;
	scaffold138	TRF	Tandem_Repeat	45463	46054	586	+	.	.
scaffold138	subtractBed	intrn	46828	47266	.	+	.	Parent=CGI_10008424;
	scaffold138	TRF	Tandem_Repeat	46822	47266	511	+	.	.
scaffold138	subtractBed	intrn	46828	47266	.	+	.	Parent=CGI_10008424;
	scaffold138	TRF	Tandem_Repeat	46822	47266	574	+	.	.
scaffold138	subtractBed	intrn	48687	49744	.	+	.	Parent=CGI_10008424;
	scaffold138	TRF	Tandem_Repeat	48687	49744	1072	+	.	.
scaffold138	subtractBed	intrn	55650	55688	.	-	.	Parent=CGI_10008425;
	scaffold138	TRF	Tandem_Repeat	55650	55688	78	+	.	.
scaffold138	subtractBed	intrn	75704	75919	.	-	.	Parent=CGI_10008427;
	scaffold138	WUBlastX	LINE_L1-Tx1	75704	75919	49	-	.	.
scaffold138	subtractBed	intrn	75918	76130	.	-	.	Parent=CGI_10008427;
	scaffold138	WUBlastX	LINE_L1-Tx1	75918	76130	70	-	.	.
scaffold138	subtractBed	intrn	76008	76190	.	-	.	Parent=CGI_10008427;
	scaffold138	WUBlastX	LINE_L1-Tx1	76008	76190	33	-	.	.
scaffold138	subtractBed	intrn	75421	75717	.	-	.	Parent=CGI_10008427;
	scaffold138	WUBlastX	LINE_L1	75421	75717	49	-	.	.
scaffold138	subtractBed	intrn	86697	86882	.	+	.	Parent=CGI_10008428;
	scaffold138	WUBlastX	LINE_RTE-X	86697	86882	70	-	.	.
scaffold138	subtractBed	intrn	86482	86679	.	+	.	Parent=CGI_10008428;
	scaffold138	WUBlastX	LINE_RTE-X	86482	86679	41	-	.	.
scaffold138	subtractBed	intrn	86694	86969	.	+	.	Parent=CGI_10008428;
	scaffold138	WUBlastX	LINE_RTE-X	86694	86969	66	-	.	.
scaffold138	subtractBed	intrn	164292	164687	.	-	.	Parent=CGI_10008431;
	scaffold138	WUBlastX	LINE_CR1-L2	164292	164687	50	-	.	.
scaffold138	subtractBed	intrn	164292	164621	.	-	.	Parent=CGI_10008431;
	scaffold138	WUBlastX	LINE_L2	164292	164621	100	-	.	.
scaffold1380	subtractBed	intrn	94660	94774	.	+	.	Parent=CGI_10004352;
	scaffold1380	TRF	Tandem_Repeat	94660	94774	178	+	.	.
scaffold1382	subtractBed	intrn	27806	27899	.	+	.	Parent=CGI_10011169;
	scaffold1382	TRF	Tandem_Repeat	27806	27899	152	+	.	.
scaffold1382	subtractBed	intrn	37786	37825	.	+	.	Parent=CGI_10011171;
	scaffold1382	TRF	Tandem_Repeat	37786	37825	80	+	.	.
scaffold1382	subtractBed	intrn	117244	117674	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	117244	117674	727	+	.	.
scaffold1382	subtractBed	intrn	120278	120323	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	120278	120323	56	+	.	.
scaffold1382	subtractBed	intrn	122709	122759	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	122709	122759	102	+	.	.
scaffold1382	subtractBed	intrn	122945	122977	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	122945	122977	66	+	.	.
scaffold1382	subtractBed	intrn	122975	123018	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	122975	123018	88	+	.	.
scaffold1382	subtractBed	intrn	123513	123572	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	123513	123572	66	+	.	.
scaffold1382	subtractBed	intrn	128768	128806	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	128768	128806	60	+	.	.
scaffold1382	subtractBed	intrn	138525	138614	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	138525	138614	94	+	.	.
scaffold1382	subtractBed	intrn	139814	139873	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	139814	139873	57	+	.	.
scaffold1382	subtractBed	intrn	140487	140769	.	-	.	Parent=CGI_10011173;
	scaffold1382	TRF	Tandem_Repeat	140487	140769	128	+	.	.
scaffold1382	subtractBed	intrn	138692	139549	.	-	.	Parent=CGI_10011173;
	scaffold1382	WUBlastX	LINE_RTE-X	138692	139549	248	+	.	.
scaffold1382	subtractBed	intrn	139337	139606	.	-	.	Parent=CGI_10011173;
	scaffold1382	WUBlastX	LINE_RTE-X	139337	139606	86	+	.	.
scaffold1382	subtractBed	intrn	138632	139027	.	-	.	Parent=CGI_10011173;
	scaffold1382	WUBlastX	LINE_CR1	138632	139027	70	+	.	.
scaffold1382	subtractBed	intrn	166726	166843	.	+	.	Parent=CGI_10011174;
	scaffold1382	TRF	Tandem_Repeat	166726	166843	146	+	.	.
scaffold1382	subtractBed	intrn	178419	178835	.	+	.	Parent=CGI_10011175;
	scaffold1382	TRF	Tandem_Repeat	178419	178835	595	+	.	.
scaffold1382	subtractBed	intrn	178434	178642	.	+	.	Parent=CGI_10011175;
	scaffold1382	TRF	Tandem_Repeat	178434	178642	88	+	.	.
scaffold1382	subtractBed	intrn	218920	218943	.	-	.	Parent=CGI_10011177;
	scaffold1382	WUBlastX	DNA_Harbinger	218920	219264	170	+	.	.
scaffold1382	subtractBed	intrn	217967	218074	.	-	.	Parent=CGI_10011177;
	scaffold1382	WUBlastX	DNA_Harbinger	217967	218074	21	+	.	.
scaffold1382	subtractBed	intrn	219830	219834	.	-	.	Parent=CGI_10011177;
	scaffold1382	WUBlastX	DNA_Harbinger	219830	219946	37	+	.	.
scaffold1382	subtractBed	intrn	219353	219634	.	-	.	Parent=CGI_10011177;
	scaffold1382	WUBlastX	DNA_Harbinger	219353	219634	220	+	.	.
scaffold1382	subtractBed	intrn	226474	228025	.	-	.	Parent=CGI_10011177;
	scaffold1382	TRF	Tandem_Repeat	226474	228025	2518	+	.	.
scaffold1382	subtractBed	intrn	226703	228025	.	-	.	Parent=CGI_10011177;
	scaffold1382	TRF	Tandem_Repeat	226703	228025	2293	+	.	.
scaffold1382	subtractBed	intrn	225971	228025	.	-	.	Parent=CGI_10011177;
	scaffold1382	TRF	Tandem_Repeat	225971	228025	3397	+	.	.
scaffold1382	subtractBed	intrn	219830	219834	.	+	.	Parent=CGI_10011178;
	scaffold1382	WUBlastX	DNA_Harbinger	219830	219946	37	+	.	.
scaffold1382	subtractBed	intrn	219353	219634	.	+	.	Parent=CGI_10011178;
	scaffold1382	WUBlastX	DNA_Harbinger	219353	219634	220	+	.	.
scaffold1382	subtractBed	intrn	232612	232866	.	-	.	Parent=CGI_10011181;
	scaffold1382	WUBlastX	LTR_DIRS	232612	232866	88	-	.	.
scaffold1382	subtractBed	intrn	232615	232818	.	-	.	Parent=CGI_10011181;
	scaffold1382	WUBlastX	LTR_DIRS	232615	232818	120	-	.	.
scaffold1382	subtractBed	intrn	233324	233710	.	-	.	Parent=CGI_10011181;
	scaffold1382	WUBlastX	DNA_Kolobok	233324	233710	35	-	.	.
scaffold1385	subtractBed	intrn	24682	24831	.	-	.	Parent=CGI_10013834;
	scaffold1385	WUBlastX	LINE_RTE-X	24682	24831	40	+	.	.
scaffold1385	subtractBed	intrn	24613	24885	.	-	.	Parent=CGI_10013834;
	scaffold1385	WUBlastX	LINE_RTE-X	24613	24885	26	+	.	.
scaffold1385	subtractBed	intrn	24613	24834	.	-	.	Parent=CGI_10013834;
	scaffold1385	WUBlastX	LINE_RTE-X	24613	24834	30	+	.	.
scaffold1385	subtractBed	intrn	47208	47939	.	+	.	Parent=CGI_10013838;
	scaffold1385	TRF	Tandem_Repeat	47208	47954	775	+	.	.
scaffold1385	subtractBed	intrn	48203	48261	.	+	.	Parent=CGI_10013838;
	scaffold1385	TRF	Tandem_Repeat	48203	48261	118	+	.	.
scaffold1385	subtractBed	intrn	50643	50705	.	+	.	Parent=CGI_10013839;
	scaffold1385	TRF	Tandem_Repeat	50643	50705	126	+	.	.
scaffold1385	subtractBed	intrn	70386	71373	.	-	.	Parent=CGI_10013840;
	scaffold1385	TRF	Tandem_Repeat	70386	71373	1203	+	.	.
scaffold1385	subtractBed	intrn	76174	76232	.	-	.	Parent=CGI_10013840;
	scaffold1385	TRF	Tandem_Repeat	76174	76232	91	+	.	.
scaffold1385	subtractBed	intrn	81034	81079	.	-	.	Parent=CGI_10013840;
	scaffold1385	TRF	Tandem_Repeat	81034	81079	58	+	.	.
scaffold1385	subtractBed	intrn	81031	81084	.	-	.	Parent=CGI_10013840;
	scaffold1385	TRF	Tandem_Repeat	81031	81084	58	+	.	.
scaffold1385	subtractBed	intrn	93388	93416	.	-	.	Parent=CGI_10013841;
	scaffold1385	TRF	Tandem_Repeat	93388	93416	58	+	.	.
scaffold1385	subtractBed	intrn	95167	95210	.	-	.	Parent=CGI_10013841;
	scaffold1385	TRF	Tandem_Repeat	95167	95210	88	+	.	.
scaffold1385	subtractBed	intrn	96660	96713	.	-	.	Parent=CGI_10013841;
	scaffold1385	TRF	Tandem_Repeat	96660	96713	99	+	.	.
scaffold1385	subtractBed	intrn	105193	105229	.	-	.	Parent=CGI_10013841;
	scaffold1385	TRF	Tandem_Repeat	105193	105229	56	+	.	.
scaffold1385	subtractBed	intrn	144689	144745	.	-	.	Parent=CGI_10013842;
	scaffold1385	TRF	Tandem_Repeat	144689	144745	69	+	.	.
scaffold1385	subtractBed	intrn	175799	175925	.	+	.	Parent=CGI_10013844;
	scaffold1385	TRF	Tandem_Repeat	175799	175925	130	+	.	.
scaffold1385	subtractBed	intrn	268826	269263	.	-	.	Parent=CGI_10013848;
	scaffold1385	WUBlastX	LINE_RTE-X	268826	269263	49	-	.	.
scaffold1385	subtractBed	intrn	268949	269323	.	-	.	Parent=CGI_10013848;
	scaffold1385	WUBlastX	LINE_RTE-X	268949	269323	88	-	.	.
scaffold1385	subtractBed	intrn	349381	349436	.	-	.	Parent=CGI_10013851;
	scaffold1385	TRF	Tandem_Repeat	349381	349436	112	+	.	.
scaffold1385	subtractBed	intrn	349703	349738	.	-	.	Parent=CGI_10013851;
	scaffold1385	TRF	Tandem_Repeat	349703	349738	72	+	.	.
scaffold1386	subtractBed	intrn	42688	42822	.	+	.	Parent=CGI_10005449;
	scaffold1386	TRF	Tandem_Repeat	42688	42822	225	+	.	.
scaffold1386	subtractBed	intrn	45247	45298	.	+	.	Parent=CGI_10005449;
	scaffold1386	TRF	Tandem_Repeat	45247	45298	104	+	.	.
scaffold1388	subtractBed	intrn	11253	11287	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	11253	11287	70	+	.	.
scaffold1388	subtractBed	intrn	13428	13454	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	13428	13454	54	+	.	.
scaffold1388	subtractBed	intrn	16830	16887	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	16830	16887	116	+	.	.
scaffold1388	subtractBed	intrn	22527	22609	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	22527	22609	157	+	.	.
scaffold1388	subtractBed	intrn	24329	24371	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	24329	24371	86	+	.	.
scaffold1388	subtractBed	intrn	26351	27164	.	-	.	Parent=CGI_10008878;
	scaffold1388	TRF	Tandem_Repeat	26351	27164	678	+	.	.
scaffold1388	subtractBed	intrn	165668	165710	.	-	.	Parent=CGI_10008881;
	scaffold1388	TRF	Tandem_Repeat	165668	165710	77	+	.	.
scaffold1388	subtractBed	intrn	171819	171882	.	-	.	Parent=CGI_10008881;
	scaffold1388	TRF	Tandem_Repeat	171819	171882	60	+	.	.
scaffold1388	subtractBed	intrn	173519	173554	.	-	.	Parent=CGI_10008881;
	scaffold1388	TRF	Tandem_Repeat	173519	173554	63	+	.	.
scaffold1388	subtractBed	intrn	190772	190839	.	-	.	Parent=CGI_10008882;
	scaffold1388	TRF	Tandem_Repeat	190772	190839	127	+	.	.
scaffold1388	subtractBed	intrn	202351	202482	.	-	.	Parent=CGI_10008883;
	scaffold1388	TRF	Tandem_Repeat	202351	202482	113	+	.	.
scaffold139	subtractBed	intrn	99820	99851	.	+	.	Parent=CGI_10005335;
	scaffold139	TRF	Tandem_Repeat	99820	99851	55	+	.	.
scaffold139	subtractBed	intrn	101781	101806	.	+	.	Parent=CGI_10005335;
	scaffold139	TRF	Tandem_Repeat	101781	101806	52	+	.	.
scaffold139	subtractBed	intrn	109044	109084	.	+	.	Parent=CGI_10005336;
	scaffold139	TRF	Tandem_Repeat	109044	109084	82	+	.	.
scaffold139	subtractBed	intrn	109218	109730	.	+	.	Parent=CGI_10005336;
	scaffold139	TRF	Tandem_Repeat	109218	109730	785	+	.	.
scaffold139	subtractBed	intrn	111740	112890	.	+	.	Parent=CGI_10005336;
	scaffold139	TRF	Tandem_Repeat	111740	112890	1089	+	.	.
scaffold139	subtractBed	intrn	111740	112890	.	+	.	Parent=CGI_10005336;
	scaffold139	TRF	Tandem_Repeat	111740	112890	1006	+	.	.
scaffold139	subtractBed	intrn	111740	112890	.	+	.	Parent=CGI_10005336;
	scaffold139	TRF	Tandem_Repeat	111740	112890	1181	+	.	.
scaffold1391	subtractBed	intrn	197599	197653	.	-	.	Parent=CGI_10016938;
	scaffold1391	TRF	Tandem_Repeat	197599	197653	110	+	.	.
scaffold1391	subtractBed	intrn	204384	204834	.	+	.	Parent=CGI_10016939;
	scaffold1391	TRF	Tandem_Repeat	204384	204834	498	+	.	.
scaffold1391	subtractBed	intrn	204652	204796	.	+	.	Parent=CGI_10016939;
	scaffold1391	TRF	Tandem_Repeat	204652	204796	182	+	.	.
scaffold1391	subtractBed	intrn	224788	224995	.	-	.	Parent=CGI_10016942;
	scaffold1391	TRF	Tandem_Repeat	224788	224995	133	+	.	.
scaffold1391	subtractBed	intrn	224758	225009	.	-	.	Parent=CGI_10016942;
	scaffold1391	TRF	Tandem_Repeat	224758	225009	450	+	.	.
scaffold1391	subtractBed	intrn	231195	231544	.	-	.	Parent=CGI_10016942;
	scaffold1391	TRF	Tandem_Repeat	231195	231544	219	+	.	.
scaffold1391	subtractBed	intrn	232289	232449	.	-	.	Parent=CGI_10016942;
	scaffold1391	TRF	Tandem_Repeat	232289	232449	161	+	.	.
scaffold1391	subtractBed	intrn	303636	303721	.	+	.	Parent=CGI_10016947;
	scaffold1391	TRF	Tandem_Repeat	303636	303721	163	+	.	.
scaffold1391	subtractBed	intrn	354171	354237	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	354171	354237	127	+	.	.
scaffold1391	subtractBed	intrn	355496	355568	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	355496	355568	146	+	.	.
scaffold1391	subtractBed	intrn	361250	361495	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	361242	361495	125	+	.	.
scaffold1391	subtractBed	intrn	361250	361495	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	361242	361495	220	+	.	.
scaffold1391	subtractBed	intrn	382889	382915	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	382889	382915	54	+	.	.
scaffold1391	subtractBed	intrn	382953	383016	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	382953	383016	128	+	.	.
scaffold1391	subtractBed	intrn	386155	386246	.	+	.	Parent=CGI_10016948;
	scaffold1391	TRF	Tandem_Repeat	386155	386246	139	+	.	.
scaffold1393	subtractBed	intrn	10659	10943	.	-	.	Parent=CGI_10004890;
	scaffold1393	WUBlastX	DNA_Sola	10659	10943	61	+	.	.
scaffold1393	subtractBed	intrn	43233	43288	.	-	.	Parent=CGI_10004891;
	scaffold1393	TRF	Tandem_Repeat	43233	43288	112	+	.	.
scaffold1393	subtractBed	intrn	43672	43722	.	-	.	Parent=CGI_10004891;
	scaffold1393	TRF	Tandem_Repeat	43672	43722	50	+	.	.
scaffold1393	subtractBed	intrn	90281	90324	.	+	.	Parent=CGI_10004897;
	scaffold1393	TRF	Tandem_Repeat	90281	90324	61	+	.	.
scaffold1396	subtractBed	intrn	73172	73211	.	-	.	Parent=CGI_10005961;
	scaffold1396	TRF	Tandem_Repeat	73172	73211	80	+	.	.
scaffold1397	subtractBed	intrn	23130	23366	.	-	.	Parent=CGI_10017113;
	scaffold1397	WUBlastX	LTR_Ngaro	23130	24074	173	+	.	.
scaffold1397	subtractBed	intrn	24093	24351	.	-	.	Parent=CGI_10017113;
	scaffold1397	WUBlastX	LTR_Ngaro	24052	24351	239	+	.	.
scaffold1397	subtractBed	intrn	24351	24869	.	-	.	Parent=CGI_10017113;
	scaffold1397	WUBlastX	LTR_Ngaro	24351	24869	183	+	.	.
scaffold1397	subtractBed	intrn	24890	25267	.	-	.	Parent=CGI_10017113;
	scaffold1397	WUBlastX	LTR_Ngaro	24890	25267	169	+	.	.
scaffold1397	subtractBed	intrn	209311	209354	.	-	.	Parent=CGI_10017120;
	scaffold1397	TRF	Tandem_Repeat	209311	209354	54	+	.	.
scaffold1397	subtractBed	intrn	209719	209871	.	-	.	Parent=CGI_10017120;
	scaffold1397	WUBlastX	DNA_IS4EU	209719	209871	71	-	.	.
scaffold1397	subtractBed	intrn	209868	210170	.	-	.	Parent=CGI_10017120;
	scaffold1397	WUBlastX	DNA_IS4EU	209868	210170	222	-	.	.
scaffold1397	subtractBed	intrn	209802	210164	.	-	.	Parent=CGI_10017120;
	scaffold1397	WUBlastX	DNA_Kolobok-IS4	209802	210164	141	-	.	.
scaffold1397	subtractBed	intrn	210130	210348	.	-	.	Parent=CGI_10017120;
	scaffold1397	WUBlastX	DNA_Kolobok-IS4	210130	210384	44	-	.	.
scaffold1397	subtractBed	intrn	221195	221227	.	-	.	Parent=CGI_10017120;
	scaffold1397	TRF	Tandem_Repeat	221195	221227	66	+	.	.
scaffold1397	subtractBed	intrn	217787	219592	.	-	.	Parent=CGI_10017120;
	scaffold1397	WUBlastX	DNA_Sola	217787	219592	352	-	.	.
scaffold1397	subtractBed	intrn	342525	342553	.	+	.	Parent=CGI_10017122;
	scaffold1397	TRF	Tandem_Repeat	342525	342553	58	+	.	.
scaffold1397	subtractBed	intrn	347224	347285	.	-	.	Parent=CGI_10017123;
	scaffold1397	TRF	Tandem_Repeat	347224	347285	115	+	.	.
scaffold1397	subtractBed	intrn	428583	428775	.	+	.	Parent=CGI_10017127;
	scaffold1397	TRF	Tandem_Repeat	428583	428775	296	+	.	.
scaffold1397	subtractBed	intrn	432560	432719	.	+	.	Parent=CGI_10017127;
	scaffold1397	TRF	Tandem_Repeat	432560	432719	115	+	.	.
scaffold1397	subtractBed	intrn	433284	433820	.	+	.	Parent=CGI_10017127;
	scaffold1397	TRF	Tandem_Repeat	433284	433820	975	+	.	.
scaffold1397	subtractBed	intrn	446789	446946	.	+	.	Parent=CGI_10017128;
	scaffold1397	TRF	Tandem_Repeat	446789	446946	145	+	.	.
scaffold1397	subtractBed	intrn	449542	450390	.	+	.	Parent=CGI_10017128;
	scaffold1397	TRF	Tandem_Repeat	449542	450390	700	+	.	.
scaffold1397	subtractBed	intrn	449517	450345	.	+	.	Parent=CGI_10017128;
	scaffold1397	TRF	Tandem_Repeat	449517	450345	611	+	.	.
scaffold1397	subtractBed	intrn	449618	450066	.	+	.	Parent=CGI_10017128;
	scaffold1397	TRF	Tandem_Repeat	449618	450066	77	+	.	.
scaffold1397	subtractBed	intrn	449542	450390	.	-	.	Parent=CGI_10017129;
	scaffold1397	TRF	Tandem_Repeat	449542	450390	700	+	.	.
scaffold1397	subtractBed	intrn	449517	450345	.	-	.	Parent=CGI_10017129;
	scaffold1397	TRF	Tandem_Repeat	449517	450345	611	+	.	.
scaffold1397	subtractBed	intrn	449618	450066	.	-	.	Parent=CGI_10017129;
	scaffold1397	TRF	Tandem_Repeat	449618	450066	77	+	.	.
scaffold1397	subtractBed	intrn	452044	452317	.	-	.	Parent=CGI_10017129;
	scaffold1397	TRF	Tandem_Repeat	452044	452317	395	+	.	.
scaffold1397	subtractBed	intrn	464717	464749	.	-	.	Parent=CGI_10017131;
	scaffold1397	TRF	Tandem_Repeat	464717	464749	66	+	.	.
scaffold1397	subtractBed	intrn	469061	469124	.	-	.	Parent=CGI_10017131;
	scaffold1397	TRF	Tandem_Repeat	469061	469124	83	+	.	.
scaffold1397	subtractBed	intrn	469101	469339	.	-	.	Parent=CGI_10017131;
	scaffold1397	TRF	Tandem_Repeat	469101	469339	111	+	.	.
scaffold1397	subtractBed	intrn	469101	469339	.	-	.	Parent=CGI_10017131;
	scaffold1397	TRF	Tandem_Repeat	469101	469339	71	+	.	.
scaffold1399	subtractBed	intrn	22231	22393	.	+	.	Parent=CGI_10007047;
	scaffold1399	TRF	Tandem_Repeat	22231	22393	125	+	.	.
scaffold1399	subtractBed	intrn	29035	29088	.	+	.	Parent=CGI_10007047;
	scaffold1399	TRF	Tandem_Repeat	29035	29088	65	+	.	.
scaffold1399	subtractBed	intrn	33517	33738	.	+	.	Parent=CGI_10007047;
	scaffold1399	WUBlastX	LINE_L1-Tx1	33517	33738	25	-	.	.
scaffold1399	subtractBed	intrn	33397	33723	.	+	.	Parent=CGI_10007047;
	scaffold1399	WUBlastX	LINE_L1	33397	33723	24	-	.	.
scaffold1399	subtractBed	intrn	33929	34096	.	+	.	Parent=CGI_10007047;
	scaffold1399	WUBlastX	LINE_L1	33929	34096	31	-	.	.
scaffold1399	subtractBed	intrn	47507	47597	.	+	.	Parent=CGI_10007048;
	scaffold1399	TRF	Tandem_Repeat	47507	47597	182	+	.	.
scaffold1399	subtractBed	intrn	56157	56182	.	+	.	Parent=CGI_10007048;
	scaffold1399	TRF	Tandem_Repeat	56157	56182	52	+	.	.
scaffold1399	subtractBed	intrn	67046	67426	.	+	.	Parent=CGI_10007049;
	scaffold1399	TRF	Tandem_Repeat	67046	67426	509	+	.	.
scaffold1399	subtractBed	intrn	67061	67490	.	+	.	Parent=CGI_10007049;
	scaffold1399	TRF	Tandem_Repeat	67061	67490	331	+	.	.
scaffold1399	subtractBed	intrn	67068	67490	.	+	.	Parent=CGI_10007049;
	scaffold1399	TRF	Tandem_Repeat	67068	67490	402	+	.	.
scaffold1399	subtractBed	intrn	68167	68412	.	+	.	Parent=CGI_10007049;
	scaffold1399	TRF	Tandem_Repeat	68167	68412	361	+	.	.
scaffold1399	subtractBed	intrn	74857	76104	.	+	.	Parent=CGI_10007049;
	scaffold1399	TRF	Tandem_Repeat	74857	76104	1898	+	.	.
scaffold1399	subtractBed	intrn	101779	101824	.	+	.	Parent=CGI_10007050;
	scaffold1399	TRF	Tandem_Repeat	101779	101824	92	+	.	.
scaffold1399	subtractBed	intrn	105779	107504	.	+	.	Parent=CGI_10007050;
	scaffold1399	TRF	Tandem_Repeat	105779	107504	2416	+	.	.
scaffold1399	subtractBed	intrn	105779	107504	.	+	.	Parent=CGI_10007050;
	scaffold1399	TRF	Tandem_Repeat	105779	107504	2377	+	.	.
scaffold1399	subtractBed	intrn	109416	109946	.	+	.	Parent=CGI_10007050;
	scaffold1399	TRF	Tandem_Repeat	109416	109946	794	+	.	.
scaffold1399	subtractBed	intrn	111135	111175	.	+	.	Parent=CGI_10007050;
	scaffold1399	TRF	Tandem_Repeat	111135	111175	82	+	.	.
scaffold1399	subtractBed	intrn	117515	118438	.	+	.	Parent=CGI_10007050;
	scaffold1399	WUBlastX	LTR_DIRS	117515	118438	596	-	.	.
scaffold1399	subtractBed	intrn	119512	120546	.	+	.	Parent=CGI_10007050;
	scaffold1399	WUBlastX	LTR_Gypsy	119512	120546	87	-	.	.
scaffold1399	subtractBed	intrn	118333	120354	.	+	.	Parent=CGI_10007050;
	scaffold1399	WUBlastX	LTR_DIRS	118333	120354	1398	-	.	.
scaffold1399	subtractBed	intrn	120730	121098	.	+	.	Parent=CGI_10007050;
	scaffold1399	WUBlastX	LTR_DIRS	120730	121098	84	-	.	.
scaffold1399	subtractBed	intrn	148857	148891	.	+	.	Parent=CGI_10007057;
	scaffold1399	TRF	Tandem_Repeat	148857	148891	70	+	.	.
scaffold1399	subtractBed	intrn	151473	151508	.	+	.	Parent=CGI_10007057;
	scaffold1399	TRF	Tandem_Repeat	151473	151508	72	+	.	.
scaffold1399	subtractBed	intrn	152326	153121	.	+	.	Parent=CGI_10007057;
	scaffold1399	TRF	Tandem_Repeat	152326	153121	1177	+	.	.
scaffold1399	subtractBed	intrn	158737	158776	.	+	.	Parent=CGI_10007057;
	scaffold1399	TRF	Tandem_Repeat	158737	158776	80	+	.	.
scaffold140	subtractBed	intrn	72457	72513	.	-	.	Parent=CGI_10020123;
	scaffold140	TRF	Tandem_Repeat	72457	72513	114	+	.	.
scaffold140	subtractBed	intrn	73034	74011	.	-	.	Parent=CGI_10020123;
	scaffold140	WUBlastX	LINE_L1-Tx1	73034	74011	258	+	.	.
scaffold140	subtractBed	intrn	74133	74609	.	-	.	Parent=CGI_10020123;
	scaffold140	WUBlastX	LINE_L1-Tx1	74133	74609	73	+	.	.
scaffold140	subtractBed	intrn	73921	74118	.	-	.	Parent=CGI_10020123;
	scaffold140	WUBlastX	LINE_L1-Tx1	73921	74118	77	+	.	.
scaffold140	subtractBed	intrn	72890	74050	.	-	.	Parent=CGI_10020123;
	scaffold140	WUBlastX	LINE_L1-Tx1	72890	74050	138	+	.	.
scaffold140	subtractBed	intrn	160308	160339	.	-	.	Parent=CGI_10020124;
	scaffold140	TRF	Tandem_Repeat	160308	160339	55	+	.	.
scaffold140	subtractBed	intrn	160451	161198	.	-	.	Parent=CGI_10020124;
	scaffold140	TRF	Tandem_Repeat	160451	161198	979	+	.	.
scaffold140	subtractBed	intrn	169942	170090	.	-	.	Parent=CGI_10020124;
	scaffold140	TRF	Tandem_Repeat	169942	170090	120	+	.	.
scaffold140	subtractBed	intrn	170196	170328	.	-	.	Parent=CGI_10020124;
	scaffold140	TRF	Tandem_Repeat	170196	170328	151	+	.	.
scaffold140	subtractBed	intrn	268532	268579	.	+	.	Parent=CGI_10020132;
	scaffold140	TRF	Tandem_Repeat	268532	268579	60	+	.	.
scaffold140	subtractBed	intrn	268533	268583	.	+	.	Parent=CGI_10020132;
	scaffold140	TRF	Tandem_Repeat	268533	268583	61	+	.	.
scaffold140	subtractBed	intrn	268549	268598	.	+	.	Parent=CGI_10020132;
	scaffold140	TRF	Tandem_Repeat	268549	268598	54	+	.	.
scaffold140	subtractBed	intrn	315413	315545	.	-	.	Parent=CGI_10020134;
	scaffold140	WUBlastX	RC_Helitron	315413	315553	24	-	.	.
scaffold140	subtractBed	intrn	343886	344263	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_L2	343886	344263	122	-	.	.
scaffold140	subtractBed	intrn	345440	345625	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_CR1	345440	345625	61	-	.	.
scaffold140	subtractBed	intrn	345473	345631	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_CR1-L2	345473	345631	100	-	.	.
scaffold140	subtractBed	intrn	345473	345808	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_L2	345473	345808	72	-	.	.
scaffold140	subtractBed	intrn	345111	345348	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_CR1-L2	345064	345348	74	-	.	.
scaffold140	subtractBed	intrn	345380	345592	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_L2	345380	345592	54	-	.	.
scaffold140	subtractBed	intrn	346057	346096	.	+	.	Parent=CGI_10020135;
	scaffold140	WUBlastX	LINE_L2	346034	346096	21	-	.	.
scaffold140	subtractBed	intrn	345440	345625	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_CR1	345440	345625	61	-	.	.
scaffold140	subtractBed	intrn	345473	345631	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_CR1-L2	345473	345631	100	-	.	.
scaffold140	subtractBed	intrn	345473	345808	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L2	345473	345808	72	-	.	.
scaffold140	subtractBed	intrn	345111	345348	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_CR1-L2	345064	345348	74	-	.	.
scaffold140	subtractBed	intrn	345380	345592	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L2	345380	345592	54	-	.	.
scaffold140	subtractBed	intrn	346057	346096	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L2	346034	346096	21	-	.	.
scaffold140	subtractBed	intrn	363727	363780	.	-	.	Parent=CGI_10020136;
	scaffold140	TRF	Tandem_Repeat	363727	363780	108	+	.	.
scaffold140	subtractBed	intrn	365526	366317	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1-Tx1	365526	366317	385	-	.	.
scaffold140	subtractBed	intrn	365261	365413	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1-Tx1	365261	365413	20	-	.	.
scaffold140	subtractBed	intrn	365340	366320	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1-Tx1	365340	366320	151	-	.	.
scaffold140	subtractBed	intrn	365892	366533	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_CR1	365892	366533	53	-	.	.
scaffold140	subtractBed	intrn	364872	365246	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1-Tx1	364872	365246	96	-	.	.
scaffold140	subtractBed	intrn	365294	365515	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1-Tx1	365294	365515	45	-	.	.
scaffold140	subtractBed	intrn	366854	366943	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L2	366854	366943	26	-	.	.
scaffold140	subtractBed	intrn	365916	366404	.	-	.	Parent=CGI_10020136;
	scaffold140	WUBlastX	LINE_L1	365916	366404	87	-	.	.
scaffold140	subtractBed	intrn	559864	559925	.	+	.	Parent=CGI_10020146;
	scaffold140	TRF	Tandem_Repeat	559864	559925	106	+	.	.
scaffold140	subtractBed	intrn	562767	563381	.	+	.	Parent=CGI_10020146;
	scaffold140	TRF	Tandem_Repeat	562767	563381	775	+	.	.
scaffold140	subtractBed	intrn	602488	603288	.	+	.	Parent=CGI_10020147;
	scaffold140	TRF	Tandem_Repeat	602488	603288	1280	+	.	.
scaffold140	subtractBed	intrn	609766	610038	.	-	.	Parent=CGI_10020148;
	scaffold140	TRF	Tandem_Repeat	609766	610038	483	+	.	.
scaffold140	subtractBed	intrn	614634	614660	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	614634	614660	54	+	.	.
scaffold140	subtractBed	intrn	617913	617974	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	617913	617974	124	+	.	.
scaffold140	subtractBed	intrn	621836	621905	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	621836	621905	124	+	.	.
scaffold140	subtractBed	intrn	622421	622463	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	622421	622463	86	+	.	.
scaffold140	subtractBed	intrn	624357	624382	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	624357	624382	52	+	.	.
scaffold140	subtractBed	intrn	624809	624967	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	624809	624967	189	+	.	.
scaffold140	subtractBed	intrn	628330	628389	.	-	.	Parent=CGI_10020149;
	scaffold140	TRF	Tandem_Repeat	628330	628389	75	+	.	.
scaffold1401	subtractBed	intrn	2067	2104	.	-	.	Parent=CGI_10001278;
	scaffold1401	TRF	Tandem_Repeat	2067	2104	67	+	.	.
scaffold1401	subtractBed	intrn	2920	2945	.	-	.	Parent=CGI_10001278;
	scaffold1401	TRF	Tandem_Repeat	2920	2945	52	+	.	.
scaffold1401	subtractBed	intrn	5468	6031	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-X	5468	6031	47	-	.	.
scaffold1401	subtractBed	intrn	4430	4639	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-X	4430	4639	38	-	.	.
scaffold1401	subtractBed	intrn	3211	4437	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-X	3211	4437	616	-	.	.
scaffold1401	subtractBed	intrn	4653	5426	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-X	4653	5426	148	-	.	.
scaffold1401	subtractBed	intrn	6296	6493	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_L2	6296	6634	59	-	.	.
scaffold1401	subtractBed	intrn	6338	6493	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_L2	6338	6622	84	-	.	.
scaffold1401	subtractBed	intrn	5408	5554	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_I	5408	5554	22	-	.	.
scaffold1401	subtractBed	intrn	4183	4497	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-BovB	4183	4497	54	-	.	.
scaffold1401	subtractBed	intrn	2960	3214	.	-	.	Parent=CGI_10001278;
	scaffold1401	WUBlastX	LINE_RTE-X	2960	3214	55	-	.	.
scaffold1402	subtractBed	intrn	40733	41004	.	-	.	Parent=CGI_10017572;
	scaffold1402	TRF	Tandem_Repeat	40733	41004	454	+	.	.
scaffold1402	subtractBed	intrn	40794	41401	.	-	.	Parent=CGI_10017572;
	scaffold1402	TRF	Tandem_Repeat	40794	41401	430	+	.	.
scaffold1402	subtractBed	intrn	40989	41338	.	-	.	Parent=CGI_10017572;
	scaffold1402	TRF	Tandem_Repeat	40989	41338	619	+	.	.
scaffold1402	subtractBed	intrn	40728	41418	.	-	.	Parent=CGI_10017572;
	scaffold1402	TRF	Tandem_Repeat	40728	41418	480	+	.	.
scaffold1402	subtractBed	intrn	64753	64816	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	64753	64816	74	+	.	.
scaffold1402	subtractBed	intrn	64756	64816	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	64756	64816	95	+	.	.
scaffold1402	subtractBed	intrn	65649	65717	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	65649	65717	75	+	.	.
scaffold1402	subtractBed	intrn	73640	73741	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	73640	73741	131	+	.	.
scaffold1402	subtractBed	intrn	73859	73901	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	73859	73901	86	+	.	.
scaffold1402	subtractBed	intrn	74219	74271	.	-	.	Parent=CGI_10017574;
	scaffold1402	TRF	Tandem_Repeat	74219	74271	106	+	.	.
scaffold1402	subtractBed	intrn	86632	86681	.	-	.	Parent=CGI_10017576;
	scaffold1402	TRF	Tandem_Repeat	86632	86681	93	+	.	.
scaffold1402	subtractBed	intrn	90403	90629	.	-	.	Parent=CGI_10017576;
	scaffold1402	TRF	Tandem_Repeat	90403	90632	237	+	.	.
scaffold1402	subtractBed	intrn	112108	112147	.	+	.	Parent=CGI_10017577;
	scaffold1402	TRF	Tandem_Repeat	112108	112147	80	+	.	.
scaffold1402	subtractBed	intrn	157835	158080	.	-	.	Parent=CGI_10017580;
	scaffold1402	WUBlastX	LINE_RTE-X	157835	158080	73	+	.	.
scaffold1402	subtractBed	intrn	157826	158209	.	-	.	Parent=CGI_10017580;
	scaffold1402	WUBlastX	LINE_RTE-X	157826	158209	62	+	.	.
scaffold1402	subtractBed	intrn	168423	168470	.	-	.	Parent=CGI_10017581;
	scaffold1402	TRF	Tandem_Repeat	168423	168470	96	+	.	.
scaffold1402	subtractBed	intrn	169468	169536	.	-	.	Parent=CGI_10017581;
	scaffold1402	TRF	Tandem_Repeat	169468	169536	138	+	.	.
scaffold1402	subtractBed	intrn	173321	175035	.	-	.	Parent=CGI_10017581;
	scaffold1402	TRF	Tandem_Repeat	173321	175035	2706	+	.	.
scaffold1402	subtractBed	intrn	176439	176505	.	-	.	Parent=CGI_10017581;
	scaffold1402	TRF	Tandem_Repeat	176439	176505	134	+	.	.
scaffold1402	subtractBed	intrn	241208	241302	.	-	.	Parent=CGI_10017583;
	scaffold1402	TRF	Tandem_Repeat	241208	241302	181	+	.	.
scaffold1402	subtractBed	intrn	245164	245207	.	-	.	Parent=CGI_10017583;
	scaffold1402	TRF	Tandem_Repeat	245164	245207	88	+	.	.
scaffold1402	subtractBed	intrn	246435	246478	.	-	.	Parent=CGI_10017583;
	scaffold1402	TRF	Tandem_Repeat	246435	246478	88	+	.	.
scaffold1402	subtractBed	intrn	246579	246637	.	-	.	Parent=CGI_10017583;
	scaffold1402	TRF	Tandem_Repeat	246579	246637	52	+	.	.
scaffold1402	subtractBed	intrn	263523	263589	.	-	.	Parent=CGI_10017585;
	scaffold1402	TRF	Tandem_Repeat	263523	263589	80	+	.	.
scaffold1402	subtractBed	intrn	264084	264117	.	-	.	Parent=CGI_10017585;
	scaffold1402	TRF	Tandem_Repeat	264084	264117	68	+	.	.
scaffold1402	subtractBed	intrn	264115	264147	.	-	.	Parent=CGI_10017585;
	scaffold1402	TRF	Tandem_Repeat	264115	264147	66	+	.	.
scaffold1402	subtractBed	intrn	264335	264385	.	-	.	Parent=CGI_10017585;
	scaffold1402	TRF	Tandem_Repeat	264335	264385	102	+	.	.
scaffold1402	subtractBed	intrn	266774	266868	.	-	.	Parent=CGI_10017585;
	scaffold1402	TRF	Tandem_Repeat	266774	266868	118	+	.	.
scaffold1402	subtractBed	intrn	286018	286054	.	-	.	Parent=CGI_10017586;
	scaffold1402	TRF	Tandem_Repeat	286018	286054	74	+	.	.
scaffold1402	subtractBed	intrn	286162	286196	.	-	.	Parent=CGI_10017586;
	scaffold1402	TRF	Tandem_Repeat	286162	286196	70	+	.	.
scaffold1402	subtractBed	intrn	303557	303671	.	-	.	Parent=CGI_10017588;
	scaffold1402	TRF	Tandem_Repeat	303557	303671	221	+	.	.
scaffold1402	subtractBed	intrn	342104	342475	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	342104	342475	245	+	.	.
scaffold1402	subtractBed	intrn	341752	341949	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	341752	341949	50	+	.	.
scaffold1402	subtractBed	intrn	342167	343591	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	342167	343591	455	+	.	.
scaffold1402	subtractBed	intrn	341815	341949	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	341815	341949	66	+	.	.
scaffold1402	subtractBed	intrn	342478	343029	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	342478	343029	458	+	.	.
scaffold1402	subtractBed	intrn	342024	342188	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	342024	342188	74	+	.	.
scaffold1402	subtractBed	intrn	341836	342000	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1	341836	342000	51	+	.	.
scaffold1402	subtractBed	intrn	343055	343711	.	-	.	Parent=CGI_10017589;
	scaffold1402	WUBlastX	LINE_CR1-L2	343055	343711	43	+	.	.
scaffold1402	subtractBed	intrn	404127	404864	.	+	.	Parent=CGI_10017593;
	scaffold1402	WUBlastX	DNA_TcMar-Tc1	404127	404864	94	+	.	.
scaffold1402	subtractBed	intrn	404565	404864	.	+	.	Parent=CGI_10017593;
	scaffold1402	WUBlastX	DNA_TcMar-Tc1	404565	404864	155	+	.	.
scaffold1402	subtractBed	intrn	403981	404553	.	+	.	Parent=CGI_10017593;
	scaffold1402	WUBlastX	DNA_TcMar-Tc1	403981	404553	22	+	.	.
scaffold1403	subtractBed	intrn	9174	9205	.	-	.	Parent=CGI_10020155;
	scaffold1403	TRF	Tandem_Repeat	9174	9205	55	+	.	.
scaffold1403	subtractBed	intrn	9254	10001	.	-	.	Parent=CGI_10020155;
	scaffold1403	TRF	Tandem_Repeat	9254	10001	1007	+	.	.
scaffold1403	subtractBed	intrn	11103	11461	.	-	.	Parent=CGI_10020155;
	scaffold1403	TRF	Tandem_Repeat	11103	11461	421	+	.	.
scaffold1403	subtractBed	intrn	13766	14176	.	-	.	Parent=CGI_10020155;
	scaffold1403	WUBlastX	LTR_Pao	13766	14176	76	-	.	.
scaffold1403	subtractBed	intrn	13838	14209	.	-	.	Parent=CGI_10020155;
	scaffold1403	WUBlastX	LTR_Pao	13838	14635	48	-	.	.
scaffold1403	subtractBed	intrn	72224	72275	.	+	.	Parent=CGI_10020157;
	scaffold1403	TRF	Tandem_Repeat	72224	72275	104	+	.	.
scaffold1403	subtractBed	intrn	96795	96842	.	+	.	Parent=CGI_10020159;
	scaffold1403	TRF	Tandem_Repeat	96795	96842	96	+	.	.
scaffold1403	subtractBed	intrn	97367	97426	.	+	.	Parent=CGI_10020159;
	scaffold1403	TRF	Tandem_Repeat	97367	97426	57	+	.	.
scaffold1403	subtractBed	intrn	127167	127196	.	-	.	Parent=CGI_10020161;
	scaffold1403	TRF	Tandem_Repeat	127167	127196	51	+	.	.
scaffold1403	subtractBed	intrn	133951	133988	.	+	.	Parent=CGI_10020162;
	scaffold1403	TRF	Tandem_Repeat	133951	133988	76	+	.	.
scaffold1403	subtractBed	intrn	143743	145046	.	+	.	Parent=CGI_10020162;
	scaffold1403	TRF	Tandem_Repeat	143743	145046	2135	+	.	.
scaffold1403	subtractBed	intrn	145547	145807	.	+	.	Parent=CGI_10020162;
	scaffold1403	TRF	Tandem_Repeat	145547	145807	369	+	.	.
scaffold1403	subtractBed	intrn	176617	176642	.	+	.	Parent=CGI_10020165;
	scaffold1403	TRF	Tandem_Repeat	176617	176642	52	+	.	.
scaffold1403	subtractBed	intrn	182558	182587	.	+	.	Parent=CGI_10020165;
	scaffold1403	TRF	Tandem_Repeat	182558	182587	51	+	.	.
scaffold1403	subtractBed	intrn	183897	183935	.	+	.	Parent=CGI_10020165;
	scaffold1403	TRF	Tandem_Repeat	183897	183935	69	+	.	.
scaffold1403	subtractBed	intrn	184527	184588	.	+	.	Parent=CGI_10020165;
	scaffold1403	TRF	Tandem_Repeat	184527	184588	79	+	.	.
scaffold1403	subtractBed	intrn	303166	303441	.	+	.	Parent=CGI_10020166;
	scaffold1403	WUBlastX	LTR_DIRS	303166	303441	124	+	.	.
scaffold1403	subtractBed	intrn	303446	305377	.	+	.	Parent=CGI_10020166;
	scaffold1403	WUBlastX	LTR_DIRS	303446	305377	912	+	.	.
scaffold1403	subtractBed	intrn	309579	310749	.	+	.	Parent=CGI_10020166;
	scaffold1403	TRF	Tandem_Repeat	309579	310749	1469	+	.	.
scaffold1403	subtractBed	intrn	335913	335994	.	+	.	Parent=CGI_10020167;
	scaffold1403	TRF	Tandem_Repeat	335913	335994	51	+	.	.
scaffold1403	subtractBed	intrn	348224	348311	.	-	.	Parent=CGI_10020168;
	scaffold1403	TRF	Tandem_Repeat	348224	348311	176	+	.	.
scaffold1403	subtractBed	intrn	393159	393254	.	+	.	Parent=CGI_10020172;
	scaffold1403	WUBlastX	LINE_CR1	393159	394067	22	+	.	.
scaffold1403	subtractBed	intrn	407642	407688	.	-	.	Parent=CGI_10020174;
	scaffold1403	TRF	Tandem_Repeat	407642	407688	87	+	.	.
scaffold1403	subtractBed	intrn	434825	435621	.	-	.	Parent=CGI_10020176;
	scaffold1403	TRF	Tandem_Repeat	434825	435621	1337	+	.	.
scaffold1403	subtractBed	intrn	435630	435722	.	-	.	Parent=CGI_10020176;
	scaffold1403	TRF	Tandem_Repeat	435630	435722	96	+	.	.
scaffold1403	subtractBed	intrn	435635	435722	.	-	.	Parent=CGI_10020176;
	scaffold1403	TRF	Tandem_Repeat	435635	435722	113	+	.	.
scaffold1403	subtractBed	intrn	436613	436637	.	-	.	Parent=CGI_10020176;
	scaffold1403	TRF	Tandem_Repeat	436613	436637	50	+	.	.
scaffold1403	subtractBed	intrn	458899	459164	.	+	.	Parent=CGI_10020178;
	scaffold1403	TRF	Tandem_Repeat	458899	459164	370	+	.	.
scaffold1403	subtractBed	intrn	460602	460650	.	+	.	Parent=CGI_10020178;
	scaffold1403	TRF	Tandem_Repeat	460602	460650	52	+	.	.
scaffold1403	subtractBed	intrn	463702	463738	.	+	.	Parent=CGI_10020178;
	scaffold1403	TRF	Tandem_Repeat	463702	463738	74	+	.	.
scaffold1403	subtractBed	intrn	571614	571871	.	-	.	Parent=CGI_10020184;
	scaffold1403	WUBlastX	LTR_Pao	571614	571871	29	-	.	.
scaffold1403	subtractBed	intrn	572961	573266	.	-	.	Parent=CGI_10020184;
	scaffold1403	TRF	Tandem_Repeat	572961	573266	375	+	.	.
scaffold1403	subtractBed	intrn	576409	576496	.	-	.	Parent=CGI_10020184;
	scaffold1403	TRF	Tandem_Repeat	576409	576496	81	+	.	.
scaffold1403	subtractBed	intrn	616950	617033	.	-	.	Parent=CGI_10020190;
	scaffold1403	WUBlastX	LTR_Pao	616950	617033	36	+	.	.
scaffold1403	subtractBed	intrn	617036	617089	.	-	.	Parent=CGI_10020190;
	scaffold1403	WUBlastX	LTR_Pao	617036	617089	27	+	.	.
scaffold1404	subtractBed	intrn	44906	45026	.	+	.	Parent=CGI_10008824;
	scaffold1404	TRF	Tandem_Repeat	44906	45026	77	+	.	.
scaffold1404	subtractBed	intrn	47204	47239	.	+	.	Parent=CGI_10008824;
	scaffold1404	TRF	Tandem_Repeat	47204	47239	72	+	.	.
scaffold1404	subtractBed	intrn	60399	60449	.	-	.	Parent=CGI_10008825;
	scaffold1404	TRF	Tandem_Repeat	60399	60449	102	+	.	.
scaffold1404	subtractBed	intrn	63688	63736	.	-	.	Parent=CGI_10008825;
	scaffold1404	TRF	Tandem_Repeat	63688	63736	98	+	.	.
scaffold1404	subtractBed	intrn	142207	142268	.	+	.	Parent=CGI_10008831;
	scaffold1404	TRF	Tandem_Repeat	142207	142268	124	+	.	.
scaffold1404	subtractBed	intrn	177335	177361	.	+	.	Parent=CGI_10008832;
	scaffold1404	TRF	Tandem_Repeat	177335	177361	54	+	.	.
scaffold1404	subtractBed	intrn	186009	186041	.	+	.	Parent=CGI_10008832;
	scaffold1404	TRF	Tandem_Repeat	186009	186041	66	+	.	.
scaffold1404	subtractBed	intrn	195669	199615	.	+	.	Parent=CGI_10008832;
	scaffold1404	TRF	Tandem_Repeat	195669	199615	4118	+	.	.
scaffold1404	subtractBed	intrn	195669	199615	.	+	.	Parent=CGI_10008832;
	scaffold1404	TRF	Tandem_Repeat	195669	199615	4582	+	.	.
scaffold1404	subtractBed	intrn	195669	199615	.	+	.	Parent=CGI_10008832;
	scaffold1404	TRF	Tandem_Repeat	195669	199615	4582	+	.	.
scaffold1408	subtractBed	intrn	3606	4085	.	+	.	Parent=CGI_10000933;
	scaffold1408	WUBlastX	LINE_RTE-X	3606	4085	22	-	.	.
scaffold1409	subtractBed	intrn	22600	22634	.	-	.	Parent=CGI_10013780;
	scaffold1409	TRF	Tandem_Repeat	22600	22634	70	+	.	.
scaffold1409	subtractBed	intrn	56248	56443	.	+	.	Parent=CGI_10013781;
	scaffold1409	TRF	Tandem_Repeat	56248	56443	171	+	.	.
scaffold1409	subtractBed	intrn	61169	61217	.	+	.	Parent=CGI_10013781;
	scaffold1409	TRF	Tandem_Repeat	61169	61217	98	+	.	.
scaffold1409	subtractBed	intrn	134042	134097	.	-	.	Parent=CGI_10013783;
	scaffold1409	TRF	Tandem_Repeat	134042	134097	103	+	.	.
scaffold1409	subtractBed	intrn	137952	139016	.	-	.	Parent=CGI_10013783;
	scaffold1409	WUBlastX	LINE_RTE-BovB	137952	139016	1288	-	.	.
scaffold1409	subtractBed	intrn	139016	140464	.	-	.	Parent=CGI_10013783;
	scaffold1409	WUBlastX	LINE_RTE-BovB	139016	140464	1949	-	.	.
scaffold1409	subtractBed	intrn	140466	140522	.	-	.	Parent=CGI_10013783;
	scaffold1409	WUBlastX	LINE_RTE-BovB	140466	140522	41	-	.	.
scaffold1409	subtractBed	intrn	142445	142490	.	-	.	Parent=CGI_10013783;
	scaffold1409	TRF	Tandem_Repeat	142445	142490	74	+	.	.
scaffold1409	subtractBed	intrn	146004	146036	.	-	.	Parent=CGI_10013783;
	scaffold1409	TRF	Tandem_Repeat	146004	146036	66	+	.	.
scaffold1409	subtractBed	intrn	225948	226026	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	225948	226026	113	+	.	.
scaffold1409	subtractBed	intrn	225948	226026	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	225948	226026	113	+	.	.
scaffold1409	subtractBed	intrn	226278	226328	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	226278	226328	102	+	.	.
scaffold1409	subtractBed	intrn	227667	227954	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	227667	227954	325	+	.	.
scaffold1409	subtractBed	intrn	228790	229254	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	228790	229254	743	+	.	.
scaffold1409	subtractBed	intrn	230142	230177	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	230142	230177	72	+	.	.
scaffold1409	subtractBed	intrn	232129	232379	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	232129	232379	294	+	.	.
scaffold1409	subtractBed	intrn	236400	236450	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	236400	236450	50	+	.	.
scaffold1409	subtractBed	intrn	240301	240356	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	240301	240356	66	+	.	.
scaffold1409	subtractBed	intrn	240304	240352	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	240304	240352	57	+	.	.
scaffold1409	subtractBed	intrn	240301	240358	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	240301	240358	107	+	.	.
scaffold1409	subtractBed	intrn	247204	247374	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	247204	247374	333	+	.	.
scaffold1409	subtractBed	intrn	247966	248012	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	247966	248012	94	+	.	.
scaffold1409	subtractBed	intrn	256044	256964	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	256044	256964	1119	+	.	.
scaffold1409	subtractBed	intrn	257765	258005	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	257765	258005	328	+	.	.
scaffold1409	subtractBed	intrn	265186	266344	.	+	.	Parent=CGI_10013785;
	scaffold1409	TRF	Tandem_Repeat	265186	266344	1188	+	.	.
scaffold1409	subtractBed	intrn	269811	269926	.	+	.	Parent=CGI_10013786;
	scaffold1409	TRF	Tandem_Repeat	269811	269926	94	+	.	.
scaffold1409	subtractBed	intrn	272484	272545	.	+	.	Parent=CGI_10013786;
	scaffold1409	TRF	Tandem_Repeat	272484	272545	115	+	.	.
scaffold1409	subtractBed	intrn	273645	274215	.	+	.	Parent=CGI_10013786;
	scaffold1409	TRF	Tandem_Repeat	273645	274215	758	+	.	.
scaffold1409	subtractBed	intrn	307498	307539	.	+	.	Parent=CGI_10013789;
	scaffold1409	TRF	Tandem_Repeat	307498	307539	75	+	.	.
scaffold1409	subtractBed	intrn	307613	307679	.	+	.	Parent=CGI_10013789;
	scaffold1409	TRF	Tandem_Repeat	307613	307679	127	+	.	.
scaffold1409	subtractBed	intrn	329798	329865	.	-	.	Parent=CGI_10013791;
	scaffold1409	TRF	Tandem_Repeat	329798	329865	118	+	.	.
scaffold1409	subtractBed	intrn	329900	331023	.	-	.	Parent=CGI_10013791;
	scaffold1409	TRF	Tandem_Repeat	329900	331023	1589	+	.	.
scaffold1409	subtractBed	intrn	334440	335580	.	-	.	Parent=CGI_10013791;
	scaffold1409	TRF	Tandem_Repeat	334440	335580	1620	+	.	.
scaffold1409	subtractBed	intrn	337570	337858	.	-	.	Parent=CGI_10013791;
	scaffold1409	WUBlastX	LINE_L2	337570	337902	70	-	.	.
scaffold1409	subtractBed	intrn	336901	337482	.	-	.	Parent=CGI_10013791;
	scaffold1409	WUBlastX	LINE_L1-Tx1	336901	337482	29	-	.	.
scaffold1409	subtractBed	intrn	340029	340418	.	-	.	Parent=CGI_10013791;
	scaffold1409	TRF	Tandem_Repeat	340029	340418	690	+	.	.
scaffold1409	subtractBed	intrn	350031	350676	.	-	.	Parent=CGI_10013791;
	scaffold1409	TRF	Tandem_Repeat	350031	350676	349	+	.	.
scaffold1409	subtractBed	intrn	329798	329865	.	+	.	Parent=CGI_10013793;
	scaffold1409	TRF	Tandem_Repeat	329798	329865	118	+	.	.
scaffold1409	subtractBed	intrn	329900	331023	.	+	.	Parent=CGI_10013793;
	scaffold1409	TRF	Tandem_Repeat	329900	331023	1589	+	.	.
scaffold1409	subtractBed	intrn	334440	335580	.	+	.	Parent=CGI_10013793;
	scaffold1409	TRF	Tandem_Repeat	334440	335580	1620	+	.	.
scaffold1409	subtractBed	intrn	337570	337858	.	+	.	Parent=CGI_10013793;
	scaffold1409	WUBlastX	LINE_L2	337570	337902	70	-	.	.
scaffold1409	subtractBed	intrn	336901	337482	.	+	.	Parent=CGI_10013793;
	scaffold1409	WUBlastX	LINE_L1-Tx1	336901	337482	29	-	.	.
scaffold1409	subtractBed	intrn	356715	356740	.	-	.	Parent=CGI_10013794;
	scaffold1409	TRF	Tandem_Repeat	356715	356740	52	+	.	.
scaffold141	subtractBed	intrn	15284	15318	.	-	.	Parent=CGI_10006577;
	scaffold141	TRF	Tandem_Repeat	15284	15318	70	+	.	.
scaffold141	subtractBed	intrn	15284	15318	.	+	.	Parent=CGI_10006578;
	scaffold141	TRF	Tandem_Repeat	15284	15318	70	+	.	.
scaffold141	subtractBed	intrn	37060	37352	.	+	.	Parent=CGI_10006580;
	scaffold141	TRF	Tandem_Repeat	37060	37352	453	+	.	.
scaffold141	subtractBed	intrn	40147	40842	.	+	.	Parent=CGI_10006580;
	scaffold141	WUBlastX	LINE_L1	40147	40842	197	-	.	.
scaffold141	subtractBed	intrn	40123	40971	.	+	.	Parent=CGI_10006580;
	scaffold141	WUBlastX	LINE_L1	40123	40971	25	-	.	.
scaffold1411	subtractBed	intrn	473	1539	.	-	.	Parent=CGI_10009183;
	scaffold1411	TRF	Tandem_Repeat	473	1539	1139	+	.	.
scaffold1411	subtractBed	intrn	473	1539	.	-	.	Parent=CGI_10009183;
	scaffold1411	TRF	Tandem_Repeat	473	1539	1083	+	.	.
scaffold1411	subtractBed	intrn	476	1539	.	-	.	Parent=CGI_10009183;
	scaffold1411	TRF	Tandem_Repeat	476	1539	1091	+	.	.
scaffold1411	subtractBed	intrn	12860	12911	.	-	.	Parent=CGI_10009183;
	scaffold1411	TRF	Tandem_Repeat	12860	12911	50	+	.	.
scaffold1411	subtractBed	intrn	14898	14922	.	-	.	Parent=CGI_10009183;
	scaffold1411	TRF	Tandem_Repeat	14898	14922	50	+	.	.
scaffold1411	subtractBed	intrn	36495	36528	.	-	.	Parent=CGI_10009185;
	scaffold1411	TRF	Tandem_Repeat	36495	36528	61	+	.	.
scaffold1411	subtractBed	intrn	72017	72051	.	-	.	Parent=CGI_10009186;
	scaffold1411	TRF	Tandem_Repeat	72017	72051	70	+	.	.
scaffold1411	subtractBed	intrn	73148	73173	.	-	.	Parent=CGI_10009186;
	scaffold1411	TRF	Tandem_Repeat	73148	73173	52	+	.	.
scaffold1411	subtractBed	intrn	80049	80375	.	-	.	Parent=CGI_10009186;
	scaffold1411	WUBlastX	LINE_RTE-X	80049	80375	58	+	.	.
scaffold1411	subtractBed	intrn	79872	80375	.	-	.	Parent=CGI_10009186;
	scaffold1411	WUBlastX	LINE_RTE-X	79872	80375	38	+	.	.
scaffold1411	subtractBed	intrn	83039	83071	.	-	.	Parent=CGI_10009186;
	scaffold1411	TRF	Tandem_Repeat	83039	83071	66	+	.	.
scaffold1411	subtractBed	intrn	128789	128815	.	-	.	Parent=CGI_10009190;
	scaffold1411	TRF	Tandem_Repeat	128789	128815	54	+	.	.
scaffold1411	subtractBed	intrn	128895	128935	.	-	.	Parent=CGI_10009190;
	scaffold1411	TRF	Tandem_Repeat	128895	128935	82	+	.	.
scaffold1411	subtractBed	intrn	138664	138705	.	-	.	Parent=CGI_10009191;
	scaffold1411	TRF	Tandem_Repeat	138664	138705	84	+	.	.
scaffold1411	subtractBed	intrn	140900	140959	.	-	.	Parent=CGI_10009191;
	scaffold1411	TRF	Tandem_Repeat	140900	140959	104	+	.	.
scaffold1411	subtractBed	intrn	141070	141115	.	-	.	Parent=CGI_10009191;
	scaffold1411	TRF	Tandem_Repeat	141070	141115	92	+	.	.
scaffold1411	subtractBed	intrn	155127	155170	.	-	.	Parent=CGI_10009192;
	scaffold1411	TRF	Tandem_Repeat	155127	155170	79	+	.	.
scaffold1418	subtractBed	intrn	8052	8105	.	+	.	Parent=CGI_10001497;
	scaffold1418	TRF	Tandem_Repeat	8052	8105	108	+	.	.
scaffold1418	subtractBed	intrn	8743	8835	.	+	.	Parent=CGI_10001497;
	scaffold1418	TRF	Tandem_Repeat	8743	8835	150	+	.	.
scaffold1418	subtractBed	intrn	14704	14713	.	+	.	Parent=CGI_10001498;
	scaffold1418	WUBlastX	DNA_Kolobok-IS4	14704	14841	78	+	.	.
scaffold1419	subtractBed	intrn	20699	20755	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	20699	20755	114	+	.	.
scaffold1419	subtractBed	intrn	27164	27231	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	27164	27231	82	+	.	.
scaffold1419	subtractBed	intrn	27161	27230	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	27161	27230	131	+	.	.
scaffold1419	subtractBed	intrn	36932	37737	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	36932	37737	731	+	.	.
scaffold1419	subtractBed	intrn	37082	37771	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	37082	37797	512	+	.	.
scaffold1419	subtractBed	intrn	37610	37771	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	37610	37790	143	+	.	.
scaffold1419	subtractBed	intrn	49695	50354	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	49695	50354	581	+	.	.
scaffold1419	subtractBed	intrn	49689	50358	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	49689	50358	695	+	.	.
scaffold1419	subtractBed	intrn	49772	50358	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	49772	50358	661	+	.	.
scaffold1419	subtractBed	intrn	69198	69243	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	69198	69243	65	+	.	.
scaffold1419	subtractBed	intrn	69244	69278	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	69244	69278	70	+	.	.
scaffold1419	subtractBed	intrn	77074	77216	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	77074	77216	94	+	.	.
scaffold1419	subtractBed	intrn	80925	81260	.	-	.	Parent=CGI_10005452;
	scaffold1419	WUBlastX	DNA_TcMar-Marin	80925	81260	83	+	.	.
scaffold1419	subtractBed	intrn	86002	86048	.	-	.	Parent=CGI_10005452;
	scaffold1419	TRF	Tandem_Repeat	86002	86048	51	+	.	.
scaffold1419	subtractBed	intrn	107043	107072	.	-	.	Parent=CGI_10005453;
	scaffold1419	TRF	Tandem_Repeat	107043	107072	60	+	.	.
scaffold142	subtractBed	intrn	45530	45621	.	-	.	Parent=CGI_10026754;
	scaffold142	TRF	Tandem_Repeat	45530	45621	96	+	.	.
scaffold142	subtractBed	intrn	45682	45856	.	-	.	Parent=CGI_10026754;
	scaffold142	TRF	Tandem_Repeat	45682	45856	165	+	.	.
scaffold142	subtractBed	intrn	45896	45992	.	-	.	Parent=CGI_10026754;
	scaffold142	TRF	Tandem_Repeat	45896	45992	117	+	.	.
scaffold142	subtractBed	intrn	46061	46161	.	-	.	Parent=CGI_10026754;
	scaffold142	TRF	Tandem_Repeat	46061	46161	96	+	.	.
scaffold142	subtractBed	intrn	186181	186425	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	186181	186425	118	+	.	.
scaffold142	subtractBed	intrn	189276	189301	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	189276	189301	52	+	.	.
scaffold142	subtractBed	intrn	196473	196561	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	196473	196561	108	+	.	.
scaffold142	subtractBed	intrn	197467	197527	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	197467	197527	122	+	.	.
scaffold142	subtractBed	intrn	203098	203292	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	203098	203292	173	+	.	.
scaffold142	subtractBed	intrn	203098	203262	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	203098	203262	178	+	.	.
scaffold142	subtractBed	intrn	206220	206274	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	206220	206274	110	+	.	.
scaffold142	subtractBed	intrn	206272	206314	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	206272	206314	86	+	.	.
scaffold142	subtractBed	intrn	209101	209136	.	-	.	Parent=CGI_10026756;
	scaffold142	TRF	Tandem_Repeat	209101	209136	54	+	.	.
scaffold142	subtractBed	intrn	218511	219021	.	-	.	Parent=CGI_10026759;
	scaffold142	TRF	Tandem_Repeat	218511	219021	336	+	.	.
scaffold142	subtractBed	intrn	218505	218818	.	-	.	Parent=CGI_10026759;
	scaffold142	TRF	Tandem_Repeat	218505	218818	499	+	.	.
scaffold142	subtractBed	intrn	218790	218978	.	-	.	Parent=CGI_10026759;
	scaffold142	TRF	Tandem_Repeat	218790	218978	199	+	.	.
scaffold142	subtractBed	intrn	237398	238918	.	+	.	Parent=CGI_10026760;
	scaffold142	WUBlastX	LINE_CR1	237398	238918	1294	+	.	.
scaffold142	subtractBed	intrn	236693	237352	.	+	.	Parent=CGI_10026760;
	scaffold142	WUBlastX	LINE_CR1	236693	237352	249	+	.	.
scaffold142	subtractBed	intrn	237191	239224	.	+	.	Parent=CGI_10026760;
	scaffold142	WUBlastX	LINE_I	237191	239224	241	+	.	.
scaffold142	subtractBed	intrn	236795	238918	.	+	.	Parent=CGI_10026760;
	scaffold142	WUBlastX	LINE_CR1	236795	238918	1260	+	.	.
scaffold142	subtractBed	intrn	235848	236693	.	+	.	Parent=CGI_10026760;
	scaffold142	WUBlastX	LINE_CR1	235848	236693	504	+	.	.
scaffold142	subtractBed	intrn	243045	243069	.	+	.	Parent=CGI_10026760;
	scaffold142	TRF	Tandem_Repeat	243045	243069	50	+	.	.
scaffold142	subtractBed	intrn	243207	244120	.	+	.	Parent=CGI_10026760;
	scaffold142	TRF	Tandem_Repeat	243207	244120	943	+	.	.
scaffold142	subtractBed	intrn	377551	377604	.	-	.	Parent=CGI_10026761;
	scaffold142	TRF	Tandem_Repeat	377551	377604	55	+	.	.
scaffold142	subtractBed	intrn	480544	480571	.	+	.	Parent=CGI_10026764;
	scaffold142	TRF	Tandem_Repeat	480544	480571	56	+	.	.
scaffold142	subtractBed	intrn	497420	497471	.	+	.	Parent=CGI_10026764;
	scaffold142	TRF	Tandem_Repeat	497420	497471	97	+	.	.
scaffold142	subtractBed	intrn	570523	570649	.	+	.	Parent=CGI_10026766;
	scaffold142	TRF	Tandem_Repeat	570523	570649	87	+	.	.
scaffold142	subtractBed	intrn	570558	570666	.	+	.	Parent=CGI_10026766;
	scaffold142	TRF	Tandem_Repeat	570558	570666	81	+	.	.
scaffold142	subtractBed	intrn	570581	570666	.	+	.	Parent=CGI_10026766;
	scaffold142	TRF	Tandem_Repeat	570581	570666	82	+	.	.
scaffold142	subtractBed	intrn	571956	572001	.	+	.	Parent=CGI_10026766;
	scaffold142	TRF	Tandem_Repeat	571956	572001	92	+	.	.
scaffold142	subtractBed	intrn	580907	580946	.	+	.	Parent=CGI_10026766;
	scaffold142	TRF	Tandem_Repeat	580907	580946	73	+	.	.
scaffold142	subtractBed	intrn	590959	590997	.	+	.	Parent=CGI_10026767;
	scaffold142	TRF	Tandem_Repeat	590959	590997	60	+	.	.
scaffold142	subtractBed	intrn	591495	591555	.	+	.	Parent=CGI_10026767;
	scaffold142	TRF	Tandem_Repeat	591495	591555	122	+	.	.
scaffold142	subtractBed	intrn	656211	656968	.	+	.	Parent=CGI_10026768;
	scaffold142	TRF	Tandem_Repeat	656211	656968	1026	+	.	.
scaffold142	subtractBed	intrn	747293	747361	.	+	.	Parent=CGI_10026769;
	scaffold142	TRF	Tandem_Repeat	747293	747361	138	+	.	.
scaffold142	subtractBed	intrn	746524	746997	.	+	.	Parent=CGI_10026769;
	scaffold142	WUBlastX	LINE_L2	746524	746997	26	+	.	.
scaffold142	subtractBed	intrn	746806	746973	.	+	.	Parent=CGI_10026769;
	scaffold142	WUBlastX	LINE_CR1-L2	746806	746973	39	+	.	.
scaffold142	subtractBed	intrn	853184	853230	.	+	.	Parent=CGI_10026773;
	scaffold142	TRF	Tandem_Repeat	853184	853230	94	+	.	.
scaffold142	subtractBed	intrn	863091	863136	.	+	.	Parent=CGI_10026774;
	scaffold142	TRF	Tandem_Repeat	863091	863136	92	+	.	.
scaffold142	subtractBed	intrn	966329	966417	.	-	.	Parent=CGI_10026782;
	scaffold142	TRF	Tandem_Repeat	966329	966417	126	+	.	.
scaffold142	subtractBed	intrn	968200	968226	.	-	.	Parent=CGI_10026782;
	scaffold142	TRF	Tandem_Repeat	968200	968226	54	+	.	.
scaffold142	subtractBed	intrn	970131	970179	.	-	.	Parent=CGI_10026782;
	scaffold142	TRF	Tandem_Repeat	970131	970179	98	+	.	.
scaffold142	subtractBed	intrn	980422	982260	.	-	.	Parent=CGI_10026782;
	scaffold142	WUBlastX	DNA_MuDR	980422	982260	439	+	.	.
scaffold142	subtractBed	intrn	980749	982617	.	-	.	Parent=CGI_10026782;
	scaffold142	WUBlastX	DNA_MuDR	980749	982617	440	+	.	.
scaffold142	subtractBed	intrn	982754	983443	.	-	.	Parent=CGI_10026782;
	scaffold142	WUBlastX	DNA_NOF?	982754	983443	118	+	.	.
scaffold142	subtractBed	intrn	1016894	1016936	.	-	.	Parent=CGI_10026784;
	scaffold142	TRF	Tandem_Repeat	1016894	1016936	58	+	.	.
scaffold142	subtractBed	intrn	1039657	1039694	.	-	.	Parent=CGI_10026784;
	scaffold142	TRF	Tandem_Repeat	1039657	1039694	76	+	.	.
scaffold142	subtractBed	intrn	1051841	1051867	.	-	.	Parent=CGI_10026785;
	scaffold142	TRF	Tandem_Repeat	1051841	1051867	54	+	.	.
scaffold142	subtractBed	intrn	1057167	1057203	.	-	.	Parent=CGI_10026785;
	scaffold142	TRF	Tandem_Repeat	1057167	1057203	65	+	.	.
scaffold142	subtractBed	intrn	1065884	1065927	.	-	.	Parent=CGI_10026785;
	scaffold142	TRF	Tandem_Repeat	1065884	1065927	81	+	.	.
scaffold142	subtractBed	intrn	1071486	1071515	.	-	.	Parent=CGI_10026785;
	scaffold142	TRF	Tandem_Repeat	1071486	1071515	60	+	.	.
scaffold142	subtractBed	intrn	1075620	1075648	.	-	.	Parent=CGI_10026785;
	scaffold142	TRF	Tandem_Repeat	1075620	1075648	58	+	.	.
scaffold142	subtractBed	intrn	1107443	1107469	.	+	.	Parent=CGI_10026787;
	scaffold142	TRF	Tandem_Repeat	1107443	1107469	54	+	.	.
scaffold142	subtractBed	intrn	1113018	1113364	.	+	.	Parent=CGI_10026787;
	scaffold142	TRF	Tandem_Repeat	1113018	1113364	480	+	.	.
scaffold142	subtractBed	intrn	1218970	1219668	.	+	.	Parent=CGI_10026797;
	scaffold142	WUBlastX	DNA_Harbinger	1218970	1219668	33	-	.	.
scaffold142	subtractBed	intrn	1219135	1220073	.	+	.	Parent=CGI_10026797;
	scaffold142	WUBlastX	DNA_Harbinger	1219135	1220073	365	-	.	.
scaffold142	subtractBed	intrn	1243595	1243642	.	+	.	Parent=CGI_10026798;
	scaffold142	WUBlastX	DNA_MuDR	1243595	1243918	103	+	.	.
scaffold142	subtractBed	intrn	1243910	1243918	.	+	.	Parent=CGI_10026799;
	scaffold142	WUBlastX	DNA_MuDR	1243595	1243918	103	+	.	.
scaffold1422	subtractBed	intrn	6295	6321	.	-	.	Parent=CGI_10003187;
	scaffold1422	TRF	Tandem_Repeat	6295	6321	54	+	.	.
scaffold1422	subtractBed	intrn	17015	17065	.	-	.	Parent=CGI_10003187;
	scaffold1422	TRF	Tandem_Repeat	17015	17065	93	+	.	.
scaffold1422	subtractBed	intrn	17679	17704	.	-	.	Parent=CGI_10003187;
	scaffold1422	TRF	Tandem_Repeat	17679	17704	52	+	.	.
scaffold1423	subtractBed	intrn	15275	16018	.	-	.	Parent=CGI_10025403;
	scaffold1423	TRF	Tandem_Repeat	15275	16018	1215	+	.	.
scaffold1423	subtractBed	intrn	18565	18743	.	-	.	Parent=CGI_10025403;
	scaffold1423	TRF	Tandem_Repeat	18565	18756	160	+	.	.
scaffold1423	subtractBed	intrn	18570	18743	.	-	.	Parent=CGI_10025403;
	scaffold1423	TRF	Tandem_Repeat	18570	18758	145	+	.	.
scaffold1423	subtractBed	intrn	23281	23583	.	-	.	Parent=CGI_10025403;
	scaffold1423	WUBlastX	LINE_RTE-X	23281	23583	80	+	.	.
scaffold1423	subtractBed	intrn	23290	23487	.	-	.	Parent=CGI_10025403;
	scaffold1423	WUBlastX	LINE_RTE-X	23290	23487	96	+	.	.
scaffold1423	subtractBed	intrn	26616	26972	.	-	.	Parent=CGI_10025403;
	scaffold1423	TRF	Tandem_Repeat	26616	26972	430	+	.	.
scaffold1423	subtractBed	intrn	27187	27470	.	-	.	Parent=CGI_10025403;
	scaffold1423	TRF	Tandem_Repeat	27187	27470	261	+	.	.
scaffold1423	subtractBed	intrn	51009	51038	.	+	.	Parent=CGI_10025405;
	scaffold1423	TRF	Tandem_Repeat	51009	51038	60	+	.	.
scaffold1423	subtractBed	intrn	52245	52271	.	+	.	Parent=CGI_10025405;
	scaffold1423	TRF	Tandem_Repeat	52245	52271	54	+	.	.
scaffold1423	subtractBed	intrn	52408	52669	.	+	.	Parent=CGI_10025405;
	scaffold1423	TRF	Tandem_Repeat	52408	52669	157	+	.	.
scaffold1423	subtractBed	intrn	69606	69641	.	+	.	Parent=CGI_10025407;
	scaffold1423	TRF	Tandem_Repeat	69606	69641	72	+	.	.
scaffold1423	subtractBed	intrn	70023	70083	.	+	.	Parent=CGI_10025407;
	scaffold1423	TRF	Tandem_Repeat	70023	70083	59	+	.	.
scaffold1423	subtractBed	intrn	70031	70093	.	+	.	Parent=CGI_10025407;
	scaffold1423	TRF	Tandem_Repeat	70031	70093	81	+	.	.
scaffold1423	subtractBed	intrn	123253	123279	.	+	.	Parent=CGI_10025414;
	scaffold1423	TRF	Tandem_Repeat	123253	123279	54	+	.	.
scaffold1423	subtractBed	intrn	143517	143560	.	+	.	Parent=CGI_10025416;
	scaffold1423	TRF	Tandem_Repeat	143517	143560	88	+	.	.
scaffold1423	subtractBed	intrn	174385	174684	.	-	.	Parent=CGI_10025418;
	scaffold1423	TRF	Tandem_Repeat	174385	174684	421	+	.	.
scaffold1423	subtractBed	intrn	195744	195761	.	-	.	Parent=CGI_10025421;
	scaffold1423	WUBlastX	DNA_hAT	195744	195989	96	-	.	.
scaffold1423	subtractBed	intrn	195204	195206	.	-	.	Parent=CGI_10025421;
	scaffold1423	WUBlastX	DNA_hAT	194973	195206	30	-	.	.
scaffold1423	subtractBed	intrn	196199	196200	.	-	.	Parent=CGI_10025421;
	scaffold1423	WUBlastX	DNA_hAT	196199	197140	328	-	.	.
scaffold1423	subtractBed	intrn	197086	197140	.	-	.	Parent=CGI_10025421;
	scaffold1423	WUBlastX	DNA_hAT	196199	197140	328	-	.	.
scaffold1423	subtractBed	intrn	198099	198130	.	-	.	Parent=CGI_10025421;
	scaffold1423	WUBlastX	DNA_hAT	198099	198314	45	-	.	.
scaffold1423	subtractBed	intrn	218351	218387	.	-	.	Parent=CGI_10025424;
	scaffold1423	TRF	Tandem_Repeat	218351	218387	74	+	.	.
scaffold1423	subtractBed	intrn	331194	331231	.	-	.	Parent=CGI_10025427;
	scaffold1423	TRF	Tandem_Repeat	331194	331231	67	+	.	.
scaffold1423	subtractBed	intrn	368708	369703	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	368708	369703	811	+	.	.
scaffold1423	subtractBed	intrn	368697	369703	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	368697	369703	903	+	.	.
scaffold1423	subtractBed	intrn	372610	372642	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	372610	372642	66	+	.	.
scaffold1423	subtractBed	intrn	377265	377815	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	377265	377829	1058	+	.	.
scaffold1423	subtractBed	intrn	378849	379060	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	378849	379101	260	+	.	.
scaffold1423	subtractBed	intrn	378860	379060	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	378860	379101	244	+	.	.
scaffold1423	subtractBed	intrn	387093	387117	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	387093	387117	50	+	.	.
scaffold1423	subtractBed	intrn	387115	387249	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	387115	387249	52	+	.	.
scaffold1423	subtractBed	intrn	387093	387253	.	-	.	Parent=CGI_10025428;
	scaffold1423	TRF	Tandem_Repeat	387093	387253	69	+	.	.
scaffold1423	subtractBed	intrn	575287	575345	.	-	.	Parent=CGI_10025431;
	scaffold1423	TRF	Tandem_Repeat	575287	575345	118	+	.	.
scaffold1423	subtractBed	intrn	604266	604417	.	-	.	Parent=CGI_10025433;
	scaffold1423	TRF	Tandem_Repeat	604266	604417	107	+	.	.
scaffold1423	subtractBed	intrn	672101	672412	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672101	672412	129	+	.	.
scaffold1423	subtractBed	intrn	672412	672507	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672412	672507	54	+	.	.
scaffold1423	subtractBed	intrn	672506	672619	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672506	672619	73	+	.	.
scaffold1423	subtractBed	intrn	672954	673139	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672954	673139	63	+	.	.
scaffold1423	subtractBed	intrn	672131	672466	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672131	672466	116	+	.	.
scaffold1423	subtractBed	intrn	672954	673109	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672954	673109	78	+	.	.
scaffold1423	subtractBed	intrn	672839	673024	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	672839	673024	99	+	.	.
scaffold1423	subtractBed	intrn	674007	674138	.	-	.	Parent=CGI_10025436;
	scaffold1423	WUBlastX	DNA_Harbinger	674007	674138	39	-	.	.
scaffold1423	subtractBed	intrn	714036	714395	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LINE_RTE-X	714036	714395	35	+	.	.
scaffold1423	subtractBed	intrn	713796	714317	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LINE_Jockey	713796	714317	64	+	.	.
scaffold1423	subtractBed	intrn	713898	714326	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LINE_RTE-BovB	713898	714326	187	+	.	.
scaffold1423	subtractBed	intrn	714322	714444	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LINE_RTE-BovB	714322	714444	33	+	.	.
scaffold1423	subtractBed	intrn	714696	715832	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LINE_RTE-BovB	714696	715832	418	+	.	.
scaffold1423	subtractBed	intrn	721545	721574	.	-	.	Parent=CGI_10025438;
	scaffold1423	TRF	Tandem_Repeat	721545	721574	60	+	.	.
scaffold1423	subtractBed	intrn	729399	730574	.	-	.	Parent=CGI_10025438;
	scaffold1423	TRF	Tandem_Repeat	729399	730574	1647	+	.	.
scaffold1423	subtractBed	intrn	726073	727014	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LTR_Ngaro	726073	727014	220	-	.	.
scaffold1423	subtractBed	intrn	732071	732259	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LTR_Ngaro	732071	732259	58	-	.	.
scaffold1423	subtractBed	intrn	728530	728958	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LTR_Ngaro	728530	728958	95	-	.	.
scaffold1423	subtractBed	intrn	726990	728552	.	-	.	Parent=CGI_10025438;
	scaffold1423	WUBlastX	LTR_Ngaro	726990	728552	946	-	.	.
scaffold1423	subtractBed	intrn	833155	833182	.	+	.	Parent=CGI_10025440;
	scaffold1423	TRF	Tandem_Repeat	833155	833182	56	+	.	.
scaffold1423	subtractBed	intrn	834872	834973	.	+	.	Parent=CGI_10025440;
	scaffold1423	TRF	Tandem_Repeat	834872	834973	66	+	.	.
scaffold1423	subtractBed	intrn	867572	867622	.	+	.	Parent=CGI_10025441;
	scaffold1423	TRF	Tandem_Repeat	867572	867622	68	+	.	.
scaffold1423	subtractBed	intrn	867572	867634	.	+	.	Parent=CGI_10025441;
	scaffold1423	TRF	Tandem_Repeat	867572	867634	65	+	.	.
scaffold1423	subtractBed	intrn	869121	869341	.	+	.	Parent=CGI_10025441;
	scaffold1423	TRF	Tandem_Repeat	869121	869341	327	+	.	.
scaffold1423	subtractBed	intrn	870015	870206	.	+	.	Parent=CGI_10025441;
	scaffold1423	TRF	Tandem_Repeat	870015	870206	287	+	.	.
scaffold1423	subtractBed	intrn	876959	877010	.	-	.	Parent=CGI_10025442;
	scaffold1423	TRF	Tandem_Repeat	876959	877010	90	+	.	.
scaffold1423	subtractBed	intrn	891299	891615	.	-	.	Parent=CGI_10025442;
	scaffold1423	TRF	Tandem_Repeat	891299	891615	272	+	.	.
scaffold1423	subtractBed	intrn	900226	900302	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	900226	900302	140	+	.	.
scaffold1423	subtractBed	intrn	908392	908733	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	908392	908733	265	+	.	.
scaffold1423	subtractBed	intrn	912425	912990	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	912425	912990	733	+	.	.
scaffold1423	subtractBed	intrn	913081	913264	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	913081	913264	83	+	.	.
scaffold1423	subtractBed	intrn	912420	913386	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	912420	913398	745	+	.	.
scaffold1423	subtractBed	intrn	913289	913386	.	-	.	Parent=CGI_10025443;
	scaffold1423	TRF	Tandem_Repeat	913289	913398	69	+	.	.
scaffold1423	subtractBed	intrn	926581	926624	.	+	.	Parent=CGI_10025444;
	scaffold1423	TRF	Tandem_Repeat	926581	926624	63	+	.	.
scaffold1423	subtractBed	intrn	929515	929559	.	+	.	Parent=CGI_10025444;
	scaffold1423	TRF	Tandem_Repeat	929515	929559	63	+	.	.
scaffold1423	subtractBed	intrn	934867	935277	.	+	.	Parent=CGI_10025444;
	scaffold1423	TRF	Tandem_Repeat	934867	935317	672	+	.	.
scaffold1423	subtractBed	intrn	950659	950890	.	+	.	Parent=CGI_10025445;
	scaffold1423	TRF	Tandem_Repeat	950659	950890	353	+	.	.
scaffold1423	subtractBed	intrn	950659	950929	.	+	.	Parent=CGI_10025445;
	scaffold1423	TRF	Tandem_Repeat	950659	950929	184	+	.	.
scaffold1423	subtractBed	intrn	968624	968857	.	-	.	Parent=CGI_10025447;
	scaffold1423	TRF	Tandem_Repeat	968624	968857	432	+	.	.
scaffold1423	subtractBed	intrn	969140	969467	.	-	.	Parent=CGI_10025447;
	scaffold1423	TRF	Tandem_Repeat	969140	969469	624	+	.	.
scaffold1423	subtractBed	intrn	1002351	1002565	.	-	.	Parent=CGI_10025448;
	scaffold1423	TRF	Tandem_Repeat	1002351	1002565	331	+	.	.
scaffold1423	subtractBed	intrn	1010237	1010434	.	+	.	Parent=CGI_10025449;
	scaffold1423	TRF	Tandem_Repeat	1010237	1010434	292	+	.	.
scaffold1423	subtractBed	intrn	1016718	1018661	.	+	.	Parent=CGI_10025449;
	scaffold1423	TRF	Tandem_Repeat	1016718	1018661	2991	+	.	.
scaffold1423	subtractBed	intrn	1020838	1021990	.	+	.	Parent=CGI_10025449;
	scaffold1423	TRF	Tandem_Repeat	1020838	1021990	1285	+	.	.
scaffold1423	subtractBed	intrn	1060442	1060786	.	+	.	Parent=CGI_10025454;
	scaffold1423	WUBlastX	LTR_Ngaro	1060442	1060786	66	+	.	.
scaffold1423	subtractBed	intrn	1058089	1058757	.	+	.	Parent=CGI_10025454;
	scaffold1423	WUBlastX	LTR_Ngaro	1058089	1058757	143	+	.	.
scaffold1423	subtractBed	intrn	1059099	1060418	.	+	.	Parent=CGI_10025454;
	scaffold1423	WUBlastX	LTR_Ngaro	1059099	1060418	935	+	.	.
scaffold1423	subtractBed	intrn	1058814	1060424	.	+	.	Parent=CGI_10025454;
	scaffold1423	WUBlastX	LTR_Ngaro	1058814	1060424	784	+	.	.
scaffold1426	subtractBed	intrn	1772	1819	.	-	.	Parent=CGI_10003025;
	scaffold1426	TRF	Tandem_Repeat	1772	1819	96	+	.	.
scaffold1426	subtractBed	intrn	6647	6973	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Charlie	6647	6973	86	+	.	.
scaffold1426	subtractBed	intrn	5871	6380	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Tip100	5871	6380	61	+	.	.
scaffold1426	subtractBed	intrn	6015	6419	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Tip100	6015	6419	96	+	.	.
scaffold1426	subtractBed	intrn	6611	6880	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Tip100	6611	6880	131	+	.	.
scaffold1426	subtractBed	intrn	6880	7038	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Tip100	6880	7038	63	+	.	.
scaffold1426	subtractBed	intrn	7133	7483	.	-	.	Parent=CGI_10003025;
	scaffold1426	WUBlastX	DNA_hAT-Tip100	7133	7483	44	+	.	.
scaffold1426	subtractBed	intrn	44453	45230	.	-	.	Parent=CGI_10003026;
	scaffold1426	TRF	Tandem_Repeat	44453	45230	1015	+	.	.
scaffold1427	subtractBed	intrn	7756	7937	.	+	.	Parent=CGI_10005223;
	scaffold1427	TRF	Tandem_Repeat	7756	7937	301	+	.	.
scaffold1427	subtractBed	intrn	7944	8210	.	+	.	Parent=CGI_10005223;
	scaffold1427	TRF	Tandem_Repeat	7944	8210	256	+	.	.
scaffold1427	subtractBed	intrn	9136	9378	.	+	.	Parent=CGI_10005223;
	scaffold1427	TRF	Tandem_Repeat	9136	9378	235	+	.	.
scaffold1427	subtractBed	intrn	9136	9378	.	-	.	Parent=CGI_10005224;
	scaffold1427	TRF	Tandem_Repeat	9136	9378	235	+	.	.
scaffold1427	subtractBed	intrn	85724	86299	.	+	.	Parent=CGI_10005230;
	scaffold1427	WUBlastX	LTR_Gypsy	85724	86299	80	+	.	.
scaffold1427	subtractBed	intrn	84956	85282	.	+	.	Parent=CGI_10005230;
	scaffold1427	WUBlastX	LTR_Gypsy	84956	85282	96	+	.	.
scaffold1427	subtractBed	intrn	85070	86203	.	+	.	Parent=CGI_10005230;
	scaffold1427	WUBlastX	LTR_Gypsy	85070	86203	339	+	.	.
scaffold1427	subtractBed	intrn	84946	84978	.	+	.	Parent=CGI_10005230;
	scaffold1427	WUBlastX	LTR_Gypsy	84946	84978	21	+	.	.
scaffold1427	subtractBed	intrn	105745	106023	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	105745	106023	36	-	.	.
scaffold1427	subtractBed	intrn	104753	105265	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	104753	105265	192	-	.	.
scaffold1427	subtractBed	intrn	104834	105268	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	104834	105268	215	-	.	.
scaffold1427	subtractBed	intrn	105790	106092	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	105790	106092	41	-	.	.
scaffold1427	subtractBed	intrn	105231	105575	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	105231	105575	58	-	.	.
scaffold1427	subtractBed	intrn	105351	105629	.	+	.	Parent=CGI_10005232;
	scaffold1427	WUBlastX	DNA_Harbinger	105351	105629	87	-	.	.
scaffold1428	subtractBed	intrn	23510	23943	.	+	.	Parent=CGI_10001542;
	scaffold1428	TRF	Tandem_Repeat	23510	23943	139	+	.	.
scaffold1429	subtractBed	intrn	3714	3752	.	-	.	Parent=CGI_10001354;
	scaffold1429	TRF	Tandem_Repeat	3714	3752	51	+	.	.
scaffold1429	subtractBed	intrn	14565	15194	.	+	.	Parent=CGI_10001355;
	scaffold1429	WUBlastX	DNA_IS4EU	14565	15194	234	-	.	.
scaffold1429	subtractBed	intrn	15563	15862	.	+	.	Parent=CGI_10001355;
	scaffold1429	WUBlastX	DNA_Kolobok-IS4	15455	15862	27	+	.	.
scaffold1429	subtractBed	intrn	17269	17437	.	+	.	Parent=CGI_10001355;
	scaffold1429	WUBlastX	DNA_IS4EU	17269	17514	57	-	.	.
scaffold1429	subtractBed	intrn	15775	16470	.	+	.	Parent=CGI_10001355;
	scaffold1429	WUBlastX	DNA_IS4EU	15775	16470	329	+	.	.
scaffold143	subtractBed	intrn	19430	19747	.	+	.	Parent=CGI_10010006;
	scaffold143	WUBlastX	LTR_Gypsy	19430	19747	63	-	.	.
scaffold143	subtractBed	intrn	19806	20975	.	+	.	Parent=CGI_10010006;
	scaffold143	WUBlastX	LTR_Gypsy	19806	20975	1055	-	.	.
scaffold143	subtractBed	intrn	20900	22741	.	+	.	Parent=CGI_10010006;
	scaffold143	WUBlastX	LTR_Gypsy	20900	22741	1581	-	.	.
scaffold143	subtractBed	intrn	19644	20459	.	+	.	Parent=CGI_10010006;
	scaffold143	WUBlastX	LTR_Gypsy	19644	20459	147	-	.	.
scaffold143	subtractBed	intrn	19610	19759	.	+	.	Parent=CGI_10010006;
	scaffold143	WUBlastX	LTR_Gypsy	19610	19759	66	-	.	.
scaffold143	subtractBed	intrn	40035	40277	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	40035	40277	181	-	.	.
scaffold143	subtractBed	intrn	40226	41227	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	40226	41227	975	-	.	.
scaffold143	subtractBed	intrn	41239	42708	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	41239	42708	1406	-	.	.
scaffold143	subtractBed	intrn	42980	43483	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	42980	43483	480	-	.	.
scaffold143	subtractBed	intrn	42860	43432	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	42860	43432	262	-	.	.
scaffold143	subtractBed	intrn	42735	42983	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	42735	42983	37	-	.	.
scaffold143	subtractBed	intrn	39863	39982	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	39863	39982	20	-	.	.
scaffold143	subtractBed	intrn	39951	40265	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	39951	40265	44	-	.	.
scaffold143	subtractBed	intrn	39882	40259	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	39882	40259	27	-	.	.
scaffold143	subtractBed	intrn	46216	46279	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	46216	46279	121	+	.	.
scaffold143	subtractBed	intrn	57442	57493	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	57442	57493	97	+	.	.
scaffold143	subtractBed	intrn	59195	59353	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	59195	59353	196	+	.	.
scaffold143	subtractBed	intrn	65790	65959	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	65790	65959	208	+	.	.
scaffold143	subtractBed	intrn	65791	65961	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	65791	65961	195	+	.	.
scaffold143	subtractBed	intrn	65790	65961	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	65790	65961	215	+	.	.
scaffold143	subtractBed	intrn	66788	66870	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	66788	66870	139	+	.	.
scaffold143	subtractBed	intrn	68649	68713	.	+	.	Parent=CGI_10010007;
	scaffold143	TRF	Tandem_Repeat	68649	68713	130	+	.	.
scaffold143	subtractBed	intrn	73259	75634	.	+	.	Parent=CGI_10010007;
	scaffold143	WUBlastX	LTR_Gypsy	73259	75634	2051	+	.	.
scaffold143	subtractBed	intrn	117839	118172	.	-	.	Parent=CGI_10010011;
	scaffold143	TRF	Tandem_Repeat	117839	118172	551	+	.	.
scaffold143	subtractBed	intrn	120708	121016	.	-	.	Parent=CGI_10010011;
	scaffold143	TRF	Tandem_Repeat	120708	121016	501	+	.	.
scaffold143	subtractBed	intrn	117839	118172	.	+	.	Parent=CGI_10010012;
	scaffold143	TRF	Tandem_Repeat	117839	118172	551	+	.	.
scaffold143	subtractBed	intrn	120708	121016	.	+	.	Parent=CGI_10010012;
	scaffold143	TRF	Tandem_Repeat	120708	121016	501	+	.	.
scaffold143	subtractBed	intrn	147194	147349	.	+	.	Parent=CGI_10010012;
	scaffold143	WUBlastX	LINE_RTE-X	147194	147349	25	-	.	.
scaffold143	subtractBed	intrn	147254	147361	.	+	.	Parent=CGI_10010012;
	scaffold143	WUBlastX	LINE_RTE-X	147254	147361	41	-	.	.
scaffold143	subtractBed	intrn	147363	147521	.	+	.	Parent=CGI_10010012;
	scaffold143	WUBlastX	LINE_RTE-X	147363	147521	22	-	.	.
scaffold143	subtractBed	intrn	154990	155056	.	-	.	Parent=CGI_10010014;
	scaffold143	TRF	Tandem_Repeat	154990	155056	80	+	.	.
scaffold143	subtractBed	intrn	154998	155056	.	-	.	Parent=CGI_10010014;
	scaffold143	TRF	Tandem_Repeat	154998	155056	73	+	.	.
scaffold143	subtractBed	intrn	155309	156631	.	-	.	Parent=CGI_10010014;
	scaffold143	TRF	Tandem_Repeat	155309	156631	1608	+	.	.
scaffold143	subtractBed	intrn	158355	158410	.	-	.	Parent=CGI_10010014;
	scaffold143	TRF	Tandem_Repeat	158355	158410	60	+	.	.
scaffold143	subtractBed	intrn	158683	158717	.	-	.	Parent=CGI_10010014;
	scaffold143	TRF	Tandem_Repeat	158683	158717	70	+	.	.
scaffold143	subtractBed	intrn	175577	175970	.	-	.	Parent=CGI_10010015;
	scaffold143	TRF	Tandem_Repeat	175577	175970	636	+	.	.
scaffold143	subtractBed	intrn	181851	181916	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1	181851	181916	21	-	.	.
scaffold143	subtractBed	intrn	182843	185035	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	182843	185035	872	-	.	.
scaffold143	subtractBed	intrn	184613	185119	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_Tad1?	184613	185119	68	-	.	.
scaffold143	subtractBed	intrn	186642	186685	.	-	.	Parent=CGI_10010015;
	scaffold143	TRF	Tandem_Repeat	186642	186685	88	+	.	.
scaffold143	subtractBed	intrn	189670	189719	.	-	.	Parent=CGI_10010015;
	scaffold143	TRF	Tandem_Repeat	189670	189719	100	+	.	.
scaffold143	subtractBed	intrn	186017	186073	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_RTE-BovB	186017	186073	20	-	.	.
scaffold143	subtractBed	intrn	190207	190596	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1	190207	190596	57	-	.	.
scaffold143	subtractBed	intrn	186962	187366	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	186962	187366	106	-	.	.
scaffold143	subtractBed	intrn	187964	188143	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1	187964	188143	89	-	.	.
scaffold143	subtractBed	intrn	186896	187309	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	186896	187309	105	-	.	.
scaffold143	subtractBed	intrn	186818	187315	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	186818	187315	90	-	.	.
scaffold143	subtractBed	intrn	190279	190581	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	190279	190581	162	-	.	.
scaffold143	subtractBed	intrn	192071	192775	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1	192071	192775	139	-	.	.
scaffold143	subtractBed	intrn	194480	195148	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L2	194480	195148	117	-	.	.
scaffold143	subtractBed	intrn	193069	193398	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	193069	193398	102	-	.	.
scaffold143	subtractBed	intrn	193769	194134	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	193769	194134	279	-	.	.
scaffold143	subtractBed	intrn	194591	195247	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L2	194591	195247	27	-	.	.
scaffold143	subtractBed	intrn	193162	193410	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1-Tx1	193162	193410	154	-	.	.
scaffold143	subtractBed	intrn	192067	192910	.	-	.	Parent=CGI_10010015;
	scaffold143	WUBlastX	LINE_L1	192032	192910	36	-	.	.
scaffold143	subtractBed	intrn	212305	212951	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_L1	212235	212951	218	-	.	.
scaffold143	subtractBed	intrn	212310	212912	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_L1-Tx1	212310	212912	412	-	.	.
scaffold143	subtractBed	intrn	213120	213173	.	-	.	Parent=CGI_10010016;
	scaffold143	TRF	Tandem_Repeat	213120	213173	108	+	.	.
scaffold143	subtractBed	intrn	215168	215515	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_CR1-L2	215168	215515	117	+	.	.
scaffold143	subtractBed	intrn	215096	215515	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_CR1-L2	215096	215515	88	+	.	.
scaffold143	subtractBed	intrn	215000	215515	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_CR1-L2	215000	215515	59	+	.	.
scaffold143	subtractBed	intrn	215288	215515	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_CR1-L2	215288	215515	118	+	.	.
scaffold143	subtractBed	intrn	212505	213083	.	-	.	Parent=CGI_10010016;
	scaffold143	WUBlastX	LINE_CR1	212505	213083	51	-	.	.
scaffold143	subtractBed	intrn	219236	219372	.	-	.	Parent=CGI_10010016;
	scaffold143	TRF	Tandem_Repeat	219236	219372	96	+	.	.
scaffold143	subtractBed	intrn	219261	219393	.	-	.	Parent=CGI_10010016;
	scaffold143	TRF	Tandem_Repeat	219261	219393	70	+	.	.
scaffold143	subtractBed	intrn	219677	219715	.	-	.	Parent=CGI_10010016;
	scaffold143	TRF	Tandem_Repeat	219677	219715	51	+	.	.
scaffold143	subtractBed	intrn	219236	219372	.	+	.	Parent=CGI_10010017;
	scaffold143	TRF	Tandem_Repeat	219236	219372	96	+	.	.
scaffold143	subtractBed	intrn	219261	219393	.	+	.	Parent=CGI_10010017;
	scaffold143	TRF	Tandem_Repeat	219261	219393	70	+	.	.
scaffold143	subtractBed	intrn	219677	219715	.	+	.	Parent=CGI_10010017;
	scaffold143	TRF	Tandem_Repeat	219677	219715	51	+	.	.
scaffold143	subtractBed	intrn	221878	222395	.	+	.	Parent=CGI_10010017;
	scaffold143	TRF	Tandem_Repeat	221878	222395	941	+	.	.
scaffold143	subtractBed	intrn	233818	233873	.	-	.	Parent=CGI_10010018;
	scaffold143	TRF	Tandem_Repeat	233818	233873	112	+	.	.
scaffold143	subtractBed	intrn	234091	234306	.	-	.	Parent=CGI_10010018;
	scaffold143	TRF	Tandem_Repeat	234091	234306	326	+	.	.
scaffold143	subtractBed	intrn	234192	234265	.	-	.	Parent=CGI_10010018;
	scaffold143	TRF	Tandem_Repeat	234192	234265	51	+	.	.
scaffold143	subtractBed	intrn	239806	239870	.	-	.	Parent=CGI_10010018;
	scaffold143	TRF	Tandem_Repeat	239806	239870	130	+	.	.
scaffold143	subtractBed	intrn	241292	241349	.	-	.	Parent=CGI_10010018;
	scaffold143	TRF	Tandem_Repeat	241292	241349	116	+	.	.
scaffold1437	subtractBed	intrn	12655	13363	.	+	.	Parent=CGI_10003664;
	scaffold1437	TRF	Tandem_Repeat	12655	13363	956	+	.	.
scaffold1437	subtractBed	intrn	12673	13351	.	+	.	Parent=CGI_10003664;
	scaffold1437	TRF	Tandem_Repeat	12673	13351	974	+	.	.
scaffold1437	subtractBed	intrn	13266	13347	.	+	.	Parent=CGI_10003664;
	scaffold1437	TRF	Tandem_Repeat	13266	13347	54	+	.	.
scaffold1437	subtractBed	intrn	15019	15111	.	+	.	Parent=CGI_10003664;
	scaffold1437	TRF	Tandem_Repeat	15019	15111	120	+	.	.
scaffold1437	subtractBed	intrn	56457	56481	.	-	.	Parent=CGI_10003666;
	scaffold1437	TRF	Tandem_Repeat	56457	56481	50	+	.	.
scaffold1437	subtractBed	intrn	67199	67257	.	-	.	Parent=CGI_10003668;
	scaffold1437	TRF	Tandem_Repeat	67199	67257	50	+	.	.
scaffold1438	subtractBed	intrn	10973	11102	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	10973	11102	93	+	.	.
scaffold1438	subtractBed	intrn	11018	11164	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	11018	11164	73	+	.	.
scaffold1438	subtractBed	intrn	22186	22301	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	22186	22301	110	+	.	.
scaffold1438	subtractBed	intrn	22341	22434	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	22341	22434	82	+	.	.
scaffold1438	subtractBed	intrn	22629	22713	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	22629	22713	91	+	.	.
scaffold1438	subtractBed	intrn	23003	23129	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	23003	23129	121	+	.	.
scaffold1438	subtractBed	intrn	23221	23314	.	+	.	Parent=CGI_10002215;
	scaffold1438	TRF	Tandem_Repeat	23221	23314	82	+	.	.
scaffold144	subtractBed	intrn	34436	34524	.	+	.	Parent=CGI_10022877;
	scaffold144	TRF	Tandem_Repeat	34436	34524	151	+	.	.
scaffold144	subtractBed	intrn	44396	44432	.	+	.	Parent=CGI_10022877;
	scaffold144	TRF	Tandem_Repeat	44396	44432	74	+	.	.
scaffold144	subtractBed	intrn	45257	45302	.	+	.	Parent=CGI_10022877;
	scaffold144	TRF	Tandem_Repeat	45257	45302	92	+	.	.
scaffold144	subtractBed	intrn	62892	62953	.	+	.	Parent=CGI_10022878;
	scaffold144	TRF	Tandem_Repeat	62892	62953	124	+	.	.
scaffold144	subtractBed	intrn	63288	63340	.	+	.	Parent=CGI_10022878;
	scaffold144	TRF	Tandem_Repeat	63288	63340	106	+	.	.
scaffold144	subtractBed	intrn	70374	71083	.	+	.	Parent=CGI_10022878;
	scaffold144	TRF	Tandem_Repeat	70374	71083	899	+	.	.
scaffold144	subtractBed	intrn	71090	71128	.	+	.	Parent=CGI_10022878;
	scaffold144	TRF	Tandem_Repeat	71090	71128	60	+	.	.
scaffold144	subtractBed	intrn	73641	73984	.	+	.	Parent=CGI_10022878;
	scaffold144	TRF	Tandem_Repeat	73641	73984	206	+	.	.
scaffold144	subtractBed	intrn	70374	71083	.	-	.	Parent=CGI_10022879;
	scaffold144	TRF	Tandem_Repeat	70374	71083	899	+	.	.
scaffold144	subtractBed	intrn	71090	71128	.	-	.	Parent=CGI_10022879;
	scaffold144	TRF	Tandem_Repeat	71090	71128	60	+	.	.
scaffold144	subtractBed	intrn	87324	87521	.	-	.	Parent=CGI_10022880;
	scaffold144	TRF	Tandem_Repeat	87324	87521	333	+	.	.
scaffold144	subtractBed	intrn	87324	87549	.	-	.	Parent=CGI_10022880;
	scaffold144	TRF	Tandem_Repeat	87324	87549	209	+	.	.
scaffold144	subtractBed	intrn	114965	114999	.	-	.	Parent=CGI_10022882;
	scaffold144	TRF	Tandem_Repeat	114965	114999	70	+	.	.
scaffold144	subtractBed	intrn	124940	125083	.	-	.	Parent=CGI_10022882;
	scaffold144	TRF	Tandem_Repeat	124940	125083	105	+	.	.
scaffold144	subtractBed	intrn	164928	165385	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	164928	165385	290	+	.	.
scaffold144	subtractBed	intrn	164968	165385	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	164968	165385	354	+	.	.
scaffold144	subtractBed	intrn	164923	165385	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	164923	165385	505	+	.	.
scaffold144	subtractBed	intrn	166020	166207	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	166020	166207	107	+	.	.
scaffold144	subtractBed	intrn	169359	169415	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	169359	169415	51	+	.	.
scaffold144	subtractBed	intrn	171898	172281	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	171898	172281	563	+	.	.
scaffold144	subtractBed	intrn	171898	172281	.	+	.	Parent=CGI_10022884;
	scaffold144	TRF	Tandem_Repeat	171898	172281	612	+	.	.
scaffold144	subtractBed	intrn	190139	190207	.	-	.	Parent=CGI_10022886;
	scaffold144	TRF	Tandem_Repeat	190139	190207	104	+	.	.
scaffold144	subtractBed	intrn	293546	293594	.	-	.	Parent=CGI_10022893;
	scaffold144	TRF	Tandem_Repeat	293546	293594	98	+	.	.
scaffold144	subtractBed	intrn	293839	293927	.	-	.	Parent=CGI_10022893;
	scaffold144	TRF	Tandem_Repeat	293839	293927	97	+	.	.
scaffold144	subtractBed	intrn	344145	344214	.	-	.	Parent=CGI_10022896;
	scaffold144	TRF	Tandem_Repeat	344145	344214	122	+	.	.
scaffold144	subtractBed	intrn	387873	388196	.	-	.	Parent=CGI_10022897;
	scaffold144	TRF	Tandem_Repeat	387873	388196	538	+	.	.
scaffold144	subtractBed	intrn	389156	389206	.	-	.	Parent=CGI_10022897;
	scaffold144	TRF	Tandem_Repeat	389156	389206	102	+	.	.
scaffold144	subtractBed	intrn	405588	405653	.	-	.	Parent=CGI_10022899;
	scaffold144	TRF	Tandem_Repeat	405588	405653	132	+	.	.
scaffold144	subtractBed	intrn	418115	418182	.	-	.	Parent=CGI_10022899;
	scaffold144	TRF	Tandem_Repeat	418115	418182	136	+	.	.
scaffold144	subtractBed	intrn	424663	425108	.	-	.	Parent=CGI_10022899;
	scaffold144	TRF	Tandem_Repeat	424663	425108	240	+	.	.
scaffold144	subtractBed	intrn	484873	484994	.	+	.	Parent=CGI_10022903;
	scaffold144	TRF	Tandem_Repeat	484873	484994	154	+	.	.
scaffold144	subtractBed	intrn	679021	679058	.	+	.	Parent=CGI_10022908;
	scaffold144	TRF	Tandem_Repeat	679021	679058	76	+	.	.
scaffold144	subtractBed	intrn	710101	710161	.	+	.	Parent=CGI_10022910;
	scaffold144	TRF	Tandem_Repeat	710101	710161	115	+	.	.
scaffold144	subtractBed	intrn	711815	711848	.	+	.	Parent=CGI_10022910;
	scaffold144	TRF	Tandem_Repeat	711815	711848	68	+	.	.
scaffold144	subtractBed	intrn	736030	736129	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	736030	736129	200	+	.	.
scaffold144	subtractBed	intrn	741516	741545	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	741516	741545	60	+	.	.
scaffold144	subtractBed	intrn	741851	741888	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	741851	741888	76	+	.	.
scaffold144	subtractBed	intrn	741997	742021	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	741997	742021	50	+	.	.
scaffold144	subtractBed	intrn	742916	742945	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	742916	742945	60	+	.	.
scaffold144	subtractBed	intrn	743021	743065	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	743021	743065	65	+	.	.
scaffold144	subtractBed	intrn	745887	745925	.	+	.	Parent=CGI_10022912;
	scaffold144	TRF	Tandem_Repeat	745887	745925	69	+	.	.
scaffold144	subtractBed	intrn	736030	736129	.	-	.	Parent=CGI_10022913;
	scaffold144	TRF	Tandem_Repeat	736030	736129	200	+	.	.
scaffold144	subtractBed	intrn	741516	741545	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	741516	741545	60	+	.	.
scaffold144	subtractBed	intrn	741851	741888	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	741851	741888	76	+	.	.
scaffold144	subtractBed	intrn	741997	742021	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	741997	742021	50	+	.	.
scaffold144	subtractBed	intrn	742916	742945	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	742916	742945	60	+	.	.
scaffold144	subtractBed	intrn	743021	743065	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	743021	743065	65	+	.	.
scaffold144	subtractBed	intrn	745887	745925	.	-	.	Parent=CGI_10022914;
	scaffold144	TRF	Tandem_Repeat	745887	745925	69	+	.	.
scaffold144	subtractBed	intrn	779828	779889	.	-	.	Parent=CGI_10022916;
	scaffold144	TRF	Tandem_Repeat	779828	779889	65	+	.	.
scaffold144	subtractBed	intrn	779828	779889	.	-	.	Parent=CGI_10022916;
	scaffold144	TRF	Tandem_Repeat	779828	779889	83	+	.	.
scaffold144	subtractBed	intrn	786799	786902	.	-	.	Parent=CGI_10022916;
	scaffold144	TRF	Tandem_Repeat	786799	786902	190	+	.	.
scaffold144	subtractBed	intrn	794169	794256	.	-	.	Parent=CGI_10022916;
	scaffold144	TRF	Tandem_Repeat	794169	794256	167	+	.	.
scaffold1440	subtractBed	intrn	39282	40409	.	-	.	Parent=CGI_10008353;
	scaffold1440	WUBlastX	LTR_Pao	39282	40409	506	+	.	.
scaffold1440	subtractBed	intrn	39483	40415	.	-	.	Parent=CGI_10008353;
	scaffold1440	WUBlastX	LTR_Pao	39483	40415	877	+	.	.
scaffold1440	subtractBed	intrn	48557	49144	.	-	.	Parent=CGI_10008354;
	scaffold1440	WUBlastX	DNA_Maverick	48557	49144	175	-	.	.
scaffold1440	subtractBed	intrn	48557	49042	.	-	.	Parent=CGI_10008354;
	scaffold1440	WUBlastX	DNA_Maverick	48557	49042	218	-	.	.
scaffold1440	subtractBed	intrn	56275	57236	.	-	.	Parent=CGI_10008354;
	scaffold1440	TRF	Tandem_Repeat	56275	57236	1286	+	.	.
scaffold1440	subtractBed	intrn	57984	58439	.	-	.	Parent=CGI_10008354;
	scaffold1440	TRF	Tandem_Repeat	57984	58439	556	+	.	.
scaffold1440	subtractBed	intrn	49099	49173	.	-	.	Parent=CGI_10008354;
	scaffold1440	WUBlastX	DNA_Maverick	49099	49173	23	-	.	.
scaffold1440	subtractBed	intrn	63093	63273	.	-	.	Parent=CGI_10008354;
	scaffold1440	TRF	Tandem_Repeat	63093	63273	80	+	.	.
scaffold1440	subtractBed	intrn	68146	68172	.	-	.	Parent=CGI_10008354;
	scaffold1440	TRF	Tandem_Repeat	68146	68172	54	+	.	.
scaffold1440	subtractBed	intrn	177908	177954	.	+	.	Parent=CGI_10008358;
	scaffold1440	TRF	Tandem_Repeat	177908	177954	94	+	.	.
scaffold1440	subtractBed	intrn	178622	178655	.	+	.	Parent=CGI_10008358;
	scaffold1440	TRF	Tandem_Repeat	178622	178655	68	+	.	.
scaffold1440	subtractBed	intrn	186870	186903	.	+	.	Parent=CGI_10008358;
	scaffold1440	TRF	Tandem_Repeat	186870	186903	50	+	.	.
scaffold1440	subtractBed	intrn	187051	187094	.	+	.	Parent=CGI_10008358;
	scaffold1440	TRF	Tandem_Repeat	187051	187094	61	+	.	.
scaffold1440	subtractBed	intrn	188584	189777	.	+	.	Parent=CGI_10008358;
	scaffold1440	WUBlastX	DNA_Sola	188584	189777	232	+	.	.
scaffold1440	subtractBed	intrn	188827	189789	.	+	.	Parent=CGI_10008358;
	scaffold1440	WUBlastX	DNA_Sola	188827	189789	284	+	.	.
scaffold1440	subtractBed	intrn	189782	190339	.	+	.	Parent=CGI_10008358;
	scaffold1440	WUBlastX	DNA_Sola	189782	190339	361	+	.	.
scaffold1442	subtractBed	intrn	19599	19874	.	-	.	Parent=CGI_10003583;
	scaffold1442	WUBlastX	LINE_L1-Tx1	19599	19874	50	-	.	.
scaffold1442	subtractBed	intrn	19897	20304	.	-	.	Parent=CGI_10003583;
	scaffold1442	WUBlastX	LINE_L1-Tx1	19897	20304	101	-	.	.
scaffold1442	subtractBed	intrn	19566	19772	.	-	.	Parent=CGI_10003583;
	scaffold1442	WUBlastX	LINE_L1-Tx1	19566	19772	34	-	.	.
scaffold1442	subtractBed	intrn	19847	19954	.	-	.	Parent=CGI_10003583;
	scaffold1442	WUBlastX	LINE_L1	19847	19954	22	-	.	.
scaffold1442	subtractBed	intrn	19608	19829	.	-	.	Parent=CGI_10003583;
	scaffold1442	WUBlastX	LINE_L1-Tx1	19608	19829	74	-	.	.
scaffold1442	subtractBed	intrn	29720	30692	.	-	.	Parent=CGI_10003584;
	scaffold1442	TRF	Tandem_Repeat	29720	30692	1148	+	.	.
scaffold1442	subtractBed	intrn	35605	35652	.	-	.	Parent=CGI_10003584;
	scaffold1442	TRF	Tandem_Repeat	35605	35652	87	+	.	.
scaffold1442	subtractBed	intrn	35767	36588	.	-	.	Parent=CGI_10003584;
	scaffold1442	WUBlastX	LINE_L1-Tx1	35767	36588	84	-	.	.
scaffold1442	subtractBed	intrn	36602	38143	.	-	.	Parent=CGI_10003584;
	scaffold1442	WUBlastX	LINE_L1-Tx1	36602	38143	928	-	.	.
scaffold1442	subtractBed	intrn	38142	38627	.	-	.	Parent=CGI_10003584;
	scaffold1442	WUBlastX	LINE_L1-Tx1	38142	38627	293	-	.	.
scaffold1442	subtractBed	intrn	38562	38666	.	-	.	Parent=CGI_10003584;
	scaffold1442	WUBlastX	LINE_CR1	38562	38723	32	-	.	.
scaffold1442	subtractBed	intrn	58284	58286	.	-	.	Parent=CGI_10003586;
	scaffold1442	WUBlastX	DNA_MuDR	58284	58499	91	-	.	.
scaffold1445	subtractBed	intrn	111587	111630	.	-	.	Parent=CGI_10010367;
	scaffold1445	TRF	Tandem_Repeat	111587	111630	88	+	.	.
scaffold1445	subtractBed	intrn	112153	112186	.	-	.	Parent=CGI_10010367;
	scaffold1445	TRF	Tandem_Repeat	112153	112186	68	+	.	.
scaffold1445	subtractBed	intrn	134497	134726	.	+	.	Parent=CGI_10010369;
	scaffold1445	TRF	Tandem_Repeat	134497	134726	311	+	.	.
scaffold1445	subtractBed	intrn	137321	137393	.	+	.	Parent=CGI_10010370;
	scaffold1445	WUBlastX	LINE_Jockey	137321	137524	35	+	.	.
scaffold1445	subtractBed	intrn	192967	193578	.	-	.	Parent=CGI_10010372;
	scaffold1445	WUBlastX	LTR_Gypsy-Cigr	192967	193578	164	-	.	.
scaffold1445	subtractBed	intrn	225583	225670	.	-	.	Parent=CGI_10010374;
	scaffold1445	TRF	Tandem_Repeat	225583	225670	131	+	.	.
scaffold1445	subtractBed	intrn	215920	215926	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LTR_Gypsy	215630	215926	39	-	.	.
scaffold1445	subtractBed	intrn	216414	216788	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LINE_L1-Tx1	216414	216788	29	-	.	.
scaffold1445	subtractBed	intrn	217647	218231	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LINE_L1	217647	218231	45	-	.	.
scaffold1445	subtractBed	intrn	222397	222723	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LTR_Gypsy	222397	222723	20	-	.	.
scaffold1445	subtractBed	intrn	226294	226620	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LTR_Gypsy	226294	226620	20	-	.	.
scaffold1445	subtractBed	intrn	226977	227303	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LTR_Gypsy	226977	227303	20	-	.	.
scaffold1445	subtractBed	intrn	216492	218138	.	-	.	Parent=CGI_10010374;
	scaffold1445	WUBlastX	LINE_L1-Tx1	216492	218138	369	-	.	.
scaffold1445	subtractBed	intrn	231018	231593	.	-	.	Parent=CGI_10010374;
	scaffold1445	TRF	Tandem_Repeat	231018	231593	408	+	.	.
scaffold1445	subtractBed	intrn	231036	231306	.	-	.	Parent=CGI_10010374;
	scaffold1445	TRF	Tandem_Repeat	231036	231306	299	+	.	.
scaffold1445	subtractBed	intrn	231035	231537	.	-	.	Parent=CGI_10010374;
	scaffold1445	TRF	Tandem_Repeat	231035	231537	424	+	.	.
scaffold1445	subtractBed	intrn	231035	231306	.	-	.	Parent=CGI_10010374;
	scaffold1445	TRF	Tandem_Repeat	231035	231306	345	+	.	.
scaffold1445	subtractBed	intrn	240417	240454	.	-	.	Parent=CGI_10010375;
	scaffold1445	TRF	Tandem_Repeat	240417	240454	76	+	.	.
scaffold1445	subtractBed	intrn	244558	244619	.	-	.	Parent=CGI_10010375;
	scaffold1445	TRF	Tandem_Repeat	244558	244619	124	+	.	.
scaffold1445	subtractBed	intrn	246175	246228	.	-	.	Parent=CGI_10010375;
	scaffold1445	TRF	Tandem_Repeat	246175	246228	99	+	.	.
scaffold1445	subtractBed	intrn	246368	246407	.	-	.	Parent=CGI_10010375;
	scaffold1445	TRF	Tandem_Repeat	246368	246407	80	+	.	.
scaffold1445	subtractBed	intrn	247113	247144	.	-	.	Parent=CGI_10010375;
	scaffold1445	TRF	Tandem_Repeat	247113	247144	64	+	.	.
scaffold1447	subtractBed	intrn	22426	22456	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	22426	22456	62	+	.	.
scaffold1447	subtractBed	intrn	24268	24346	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	24268	24346	131	+	.	.
scaffold1447	subtractBed	intrn	27395	27436	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	27395	27436	50	+	.	.
scaffold1447	subtractBed	intrn	37139	37188	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	37139	37188	100	+	.	.
scaffold1447	subtractBed	intrn	37916	37990	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	37916	37990	55	+	.	.
scaffold1447	subtractBed	intrn	39095	39129	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	39095	39129	70	+	.	.
scaffold1447	subtractBed	intrn	39241	39308	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	39241	39308	136	+	.	.
scaffold1447	subtractBed	intrn	39704	39771	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	39704	39771	136	+	.	.
scaffold1447	subtractBed	intrn	39940	39979	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	39940	39979	64	+	.	.
scaffold1447	subtractBed	intrn	40587	40764	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	40587	40764	73	+	.	.
scaffold1447	subtractBed	intrn	44452	44580	.	+	.	Parent=CGI_10013812;
	scaffold1447	TRF	Tandem_Repeat	44452	44580	63	+	.	.
scaffold1447	subtractBed	intrn	48875	49267	.	+	.	Parent=CGI_10013812;
	scaffold1447	WUBlastX	LINE_Penelope	48875	49267	64	-	.	.
scaffold1447	subtractBed	intrn	102515	102572	.	-	.	Parent=CGI_10013817;
	scaffold1447	TRF	Tandem_Repeat	102515	102572	66	+	.	.
scaffold1447	subtractBed	intrn	99729	100286	.	-	.	Parent=CGI_10013817;
	scaffold1447	WUBlastX	DNA_TcMar-Tc1	99729	100286	300	-	.	.
scaffold1447	subtractBed	intrn	100285	100683	.	-	.	Parent=CGI_10013817;
	scaffold1447	WUBlastX	DNA_TcMar-Tc1	100285	100683	42	-	.	.
scaffold1447	subtractBed	intrn	149743	150027	.	-	.	Parent=CGI_10013818;
	scaffold1447	WUBlastX	LINE_RTE-X	149743	150027	115	-	.	.
scaffold1447	subtractBed	intrn	149647	150003	.	-	.	Parent=CGI_10013818;
	scaffold1447	WUBlastX	LINE_RTE-X	149647	150003	32	-	.	.
scaffold1447	subtractBed	intrn	153109	153432	.	-	.	Parent=CGI_10013818;
	scaffold1447	WUBlastX	DNA_TcMar-Tc1	153109	153432	93	-	.	.
scaffold1447	subtractBed	intrn	153118	153276	.	-	.	Parent=CGI_10013818;
	scaffold1447	WUBlastX	DNA_TcMar-Tc1	153118	153276	100	-	.	.
scaffold1447	subtractBed	intrn	152966	153091	.	-	.	Parent=CGI_10013818;
	scaffold1447	WUBlastX	DNA_TcMar-Tc1	152966	153091	63	-	.	.
scaffold1447	subtractBed	intrn	170572	170768	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	170572	170768	155	+	.	.
scaffold1447	subtractBed	intrn	172875	172907	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	172875	172907	66	+	.	.
scaffold1447	subtractBed	intrn	175280	175341	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	175280	175341	83	+	.	.
scaffold1447	subtractBed	intrn	175387	176172	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	175387	176172	908	+	.	.
scaffold1447	subtractBed	intrn	177005	178376	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	177005	178376	1944	+	.	.
scaffold1447	subtractBed	intrn	180469	180510	.	+	.	Parent=CGI_10013820;
	scaffold1447	TRF	Tandem_Repeat	180469	180510	68	+	.	.
scaffold1447	subtractBed	intrn	265844	265898	.	+	.	Parent=CGI_10013828;
	scaffold1447	TRF	Tandem_Repeat	265844	265898	110	+	.	.
scaffold1447	subtractBed	intrn	269396	269455	.	+	.	Parent=CGI_10013828;
	scaffold1447	TRF	Tandem_Repeat	269396	269455	113	+	.	.
scaffold1447	subtractBed	intrn	304257	304317	.	-	.	Parent=CGI_10013830;
	scaffold1447	TRF	Tandem_Repeat	304257	304317	79	+	.	.
scaffold1448	subtractBed	intrn	10672	10728	.	+	.	Parent=CGI_10011852;
	scaffold1448	TRF	Tandem_Repeat	10672	10728	114	+	.	.
scaffold1448	subtractBed	intrn	3545	3646	.	+	.	Parent=CGI_10011852;
	scaffold1448	WUBlastX	LINE_RTE-X	3545	3646	27	-	.	.
scaffold1448	subtractBed	intrn	4050	4229	.	+	.	Parent=CGI_10011852;
	scaffold1448	WUBlastX	LINE_RTE-X	4050	4229	102	-	.	.
scaffold1448	subtractBed	intrn	4107	4319	.	+	.	Parent=CGI_10011852;
	scaffold1448	WUBlastX	LINE_RTE-X	4107	4319	91	-	.	.
scaffold1448	subtractBed	intrn	3661	4110	.	+	.	Parent=CGI_10011852;
	scaffold1448	WUBlastX	LINE_RTE-X	3661	4110	229	-	.	.
scaffold1448	subtractBed	intrn	4107	4262	.	+	.	Parent=CGI_10011852;
	scaffold1448	WUBlastX	LINE_RTE-X	4107	4262	99	-	.	.
scaffold1448	subtractBed	intrn	30141	30833	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	30141	30833	441	-	.	.
scaffold1448	subtractBed	intrn	30819	31421	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	30819	31421	470	-	.	.
scaffold1448	subtractBed	intrn	31489	31601	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	31489	31899	60	-	.	.
scaffold1448	subtractBed	intrn	28861	29199	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	28861	29199	131	-	.	.
scaffold1448	subtractBed	intrn	29181	29684	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	29181	29684	161	-	.	.
scaffold1448	subtractBed	intrn	29301	29786	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	29301	29786	116	-	.	.
scaffold1448	subtractBed	intrn	29798	30106	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	29798	30106	66	-	.	.
scaffold1448	subtractBed	intrn	29855	30106	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	29855	30106	81	-	.	.
scaffold1448	subtractBed	intrn	29763	29834	.	-	.	Parent=CGI_10011853;
	scaffold1448	WUBlastX	LTR_Ngaro	29763	29834	45	-	.	.
scaffold1448	subtractBed	intrn	206662	206697	.	+	.	Parent=CGI_10011856;
	scaffold1448	TRF	Tandem_Repeat	206662	206697	54	+	.	.
scaffold1448	subtractBed	intrn	208008	208054	.	+	.	Parent=CGI_10011856;
	scaffold1448	TRF	Tandem_Repeat	208008	208054	94	+	.	.
scaffold1448	subtractBed	intrn	210062	210791	.	+	.	Parent=CGI_10011856;
	scaffold1448	TRF	Tandem_Repeat	210062	210791	1322	+	.	.
scaffold1448	subtractBed	intrn	220879	220986	.	+	.	Parent=CGI_10011856;
	scaffold1448	WUBlastX	LTR_Pao	220879	220986	28	+	.	.
scaffold1448	subtractBed	intrn	217442	219064	.	+	.	Parent=CGI_10011856;
	scaffold1448	WUBlastX	LTR_Pao	217442	219064	712	+	.	.
scaffold1448	subtractBed	intrn	220930	222450	.	+	.	Parent=CGI_10011856;
	scaffold1448	WUBlastX	LTR_Pao	220930	222450	906	+	.	.
scaffold1448	subtractBed	intrn	217034	219055	.	+	.	Parent=CGI_10011856;
	scaffold1448	WUBlastX	LTR_Pao	217034	219055	675	+	.	.
scaffold1448	subtractBed	intrn	268778	268779	.	-	.	Parent=CGI_10011859;
	scaffold1448	WUBlastX	DNA_Kolobok-Hyd	268778	268972	41	-	.	.
scaffold1448	subtractBed	intrn	269364	269920	.	-	.	Parent=CGI_10011860;
	scaffold1448	WUBlastX	DNA_IS4EU	269216	269920	80	-	.	.
scaffold1448	subtractBed	intrn	269630	270040	.	-	.	Parent=CGI_10011860;
	scaffold1448	WUBlastX	DNA_Kolobok-Hyd	269630	270040	23	-	.	.
scaffold1449	subtractBed	intrn	51700	51921	.	-	.	Parent=CGI_10010690;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	51700	51921	97	-	.	.
scaffold1449	subtractBed	intrn	51682	51963	.	-	.	Parent=CGI_10010690;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	51682	51963	59	-	.	.
scaffold1449	subtractBed	intrn	51718	52119	.	-	.	Parent=CGI_10010690;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	51718	52119	23	-	.	.
scaffold1449	subtractBed	intrn	75560	75606	.	+	.	Parent=CGI_10010691;
	scaffold1449	TRF	Tandem_Repeat	75560	75606	67	+	.	.
scaffold1449	subtractBed	intrn	73191	73343	.	+	.	Parent=CGI_10010691;
	scaffold1449	WUBlastX	DNA_TcMar-Marin	73191	73343	35	-	.	.
scaffold1449	subtractBed	intrn	72966	73313	.	+	.	Parent=CGI_10010691;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	72966	73313	55	-	.	.
scaffold1449	subtractBed	intrn	72301	72957	.	+	.	Parent=CGI_10010691;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	72301	72957	387	-	.	.
scaffold1449	subtractBed	intrn	73062	73295	.	+	.	Parent=CGI_10010691;
	scaffold1449	WUBlastX	DNA_TcMar-Tc1	73062	73295	78	-	.	.
scaffold1449	subtractBed	intrn	184216	184293	.	-	.	Parent=CGI_10010695;
	scaffold1449	TRF	Tandem_Repeat	184216	184293	111	+	.	.
scaffold1449	subtractBed	intrn	184216	184293	.	-	.	Parent=CGI_10010695;
	scaffold1449	TRF	Tandem_Repeat	184216	184293	138	+	.	.
scaffold1449	subtractBed	intrn	185118	185175	.	-	.	Parent=CGI_10010695;
	scaffold1449	TRF	Tandem_Repeat	185118	185175	107	+	.	.
scaffold1449	subtractBed	intrn	186476	186537	.	-	.	Parent=CGI_10010695;
	scaffold1449	TRF	Tandem_Repeat	186476	186537	79	+	.	.
scaffold1449	subtractBed	intrn	186471	186538	.	-	.	Parent=CGI_10010695;
	scaffold1449	TRF	Tandem_Repeat	186471	186538	91	+	.	.
scaffold145	subtractBed	intrn	37930	37964	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	37930	37964	70	+	.	.
scaffold145	subtractBed	intrn	41377	41415	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	41377	41415	69	+	.	.
scaffold145	subtractBed	intrn	43047	43095	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	43047	43095	98	+	.	.
scaffold145	subtractBed	intrn	45007	45033	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	45007	45033	54	+	.	.
scaffold145	subtractBed	intrn	56735	56776	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	56735	56776	57	+	.	.
scaffold145	subtractBed	intrn	61700	61736	.	+	.	Parent=CGI_10026546;
	scaffold145	TRF	Tandem_Repeat	61700	61736	67	+	.	.
scaffold145	subtractBed	intrn	79095	79204	.	+	.	Parent=CGI_10026547;
	scaffold145	TRF	Tandem_Repeat	79095	79204	132	+	.	.
scaffold145	subtractBed	intrn	204796	204846	.	+	.	Parent=CGI_10026552;
	scaffold145	TRF	Tandem_Repeat	204796	204846	102	+	.	.
scaffold145	subtractBed	intrn	206509	206534	.	+	.	Parent=CGI_10026552;
	scaffold145	TRF	Tandem_Repeat	206509	206534	52	+	.	.
scaffold145	subtractBed	intrn	317843	318291	.	-	.	Parent=CGI_10026554;
	scaffold145	TRF	Tandem_Repeat	317843	318291	207	+	.	.
scaffold145	subtractBed	intrn	317841	318291	.	-	.	Parent=CGI_10026554;
	scaffold145	TRF	Tandem_Repeat	317841	318291	301	+	.	.
scaffold145	subtractBed	intrn	318638	319278	.	-	.	Parent=CGI_10026554;
	scaffold145	TRF	Tandem_Repeat	318638	319278	603	+	.	.
scaffold145	subtractBed	intrn	318644	318765	.	-	.	Parent=CGI_10026554;
	scaffold145	TRF	Tandem_Repeat	318644	318765	140	+	.	.
scaffold145	subtractBed	intrn	349014	349047	.	-	.	Parent=CGI_10026555;
	scaffold145	TRF	Tandem_Repeat	349014	349047	68	+	.	.
scaffold145	subtractBed	intrn	362995	363115	.	-	.	Parent=CGI_10026555;
	scaffold145	TRF	Tandem_Repeat	362995	363115	233	+	.	.
scaffold145	subtractBed	intrn	366150	366906	.	-	.	Parent=CGI_10026555;
	scaffold145	TRF	Tandem_Repeat	366150	366906	1119	+	.	.
scaffold145	subtractBed	intrn	370990	371123	.	-	.	Parent=CGI_10026555;
	scaffold145	TRF	Tandem_Repeat	370990	371123	76	+	.	.
scaffold145	subtractBed	intrn	391820	392485	.	+	.	Parent=CGI_10026556;
	scaffold145	WUBlastX	LINE_L1-Tx1	391820	392485	35	+	.	.
scaffold145	subtractBed	intrn	397752	397841	.	+	.	Parent=CGI_10026556;
	scaffold145	TRF	Tandem_Repeat	397673	397841	257	+	.	.
scaffold145	subtractBed	intrn	420307	420502	.	-	.	Parent=CGI_10026557;
	scaffold145	TRF	Tandem_Repeat	420307	420502	326	+	.	.
scaffold145	subtractBed	intrn	420564	421077	.	-	.	Parent=CGI_10026557;
	scaffold145	TRF	Tandem_Repeat	420564	421077	866	+	.	.
scaffold145	subtractBed	intrn	422330	422572	.	-	.	Parent=CGI_10026557;
	scaffold145	WUBlastX	DNA_TcMar-Tc1	422330	422572	23	+	.	.
scaffold145	subtractBed	intrn	422336	422539	.	-	.	Parent=CGI_10026557;
	scaffold145	WUBlastX	DNA_TcMar-Tc1	422336	422539	31	+	.	.
scaffold145	subtractBed	intrn	437294	437338	.	-	.	Parent=CGI_10026557;
	scaffold145	TRF	Tandem_Repeat	437294	437338	90	+	.	.
scaffold145	subtractBed	intrn	452251	452318	.	-	.	Parent=CGI_10026558;
	scaffold145	TRF	Tandem_Repeat	452251	452318	118	+	.	.
scaffold145	subtractBed	intrn	453156	453216	.	-	.	Parent=CGI_10026558;
	scaffold145	TRF	Tandem_Repeat	453156	453216	122	+	.	.
scaffold145	subtractBed	intrn	647423	647659	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	647423	647659	153	+	.	.
scaffold145	subtractBed	intrn	649658	650116	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649658	650116	68	+	.	.
scaffold145	subtractBed	intrn	642490	642894	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_Crypton	642490	642894	88	-	.	.
scaffold145	subtractBed	intrn	649697	650233	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649697	650233	39	+	.	.
scaffold145	subtractBed	intrn	649661	649957	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649661	649957	72	+	.	.
scaffold145	subtractBed	intrn	649129	649461	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649129	649461	66	+	.	.
scaffold145	subtractBed	intrn	648857	649141	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	648857	649141	80	+	.	.
scaffold145	subtractBed	intrn	649168	649326	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649168	649326	77	+	.	.
scaffold145	subtractBed	intrn	649353	649658	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649353	649658	218	+	.	.
scaffold145	subtractBed	intrn	649664	649900	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_TcMar-Fot1	649664	649900	180	+	.	.
scaffold145	subtractBed	intrn	642933	643199	.	-	.	Parent=CGI_10026560;
	scaffold145	WUBlastX	DNA_Crypton	642933	643199	88	-	.	.
scaffold145	subtractBed	intrn	670778	670824	.	-	.	Parent=CGI_10026560;
	scaffold145	TRF	Tandem_Repeat	670778	670824	67	+	.	.
scaffold145	subtractBed	intrn	845652	845698	.	+	.	Parent=CGI_10026567;
	scaffold145	TRF	Tandem_Repeat	845652	845698	67	+	.	.
scaffold145	subtractBed	intrn	856774	857668	.	+	.	Parent=CGI_10026567;
	scaffold145	TRF	Tandem_Repeat	856774	857673	1710	+	.	.
scaffold145	subtractBed	intrn	858411	858663	.	+	.	Parent=CGI_10026567;
	scaffold145	TRF	Tandem_Repeat	858411	858674	510	+	.	.
scaffold145	subtractBed	intrn	870241	871034	.	+	.	Parent=CGI_10026567;
	scaffold145	TRF	Tandem_Repeat	870241	871034	1408	+	.	.
scaffold145	subtractBed	intrn	870241	871034	.	-	.	Parent=CGI_10026568;
	scaffold145	TRF	Tandem_Repeat	870241	871034	1408	+	.	.
scaffold145	subtractBed	intrn	971463	972088	.	+	.	Parent=CGI_10026570;
	scaffold145	TRF	Tandem_Repeat	971463	972088	906	+	.	.
scaffold145	subtractBed	intrn	1105004	1105035	.	+	.	Parent=CGI_10026571;
	scaffold145	TRF	Tandem_Repeat	1105004	1105035	64	+	.	.
scaffold145	subtractBed	intrn	1116828	1116890	.	+	.	Parent=CGI_10026571;
	scaffold145	TRF	Tandem_Repeat	1116828	1116890	83	+	.	.
scaffold145	subtractBed	intrn	1124739	1124811	.	+	.	Parent=CGI_10026573;
	scaffold145	TRF	Tandem_Repeat	1124739	1124811	112	+	.	.
scaffold145	subtractBed	intrn	1125101	1125202	.	+	.	Parent=CGI_10026573;
	scaffold145	TRF	Tandem_Repeat	1125101	1125202	84	+	.	.
scaffold145	subtractBed	intrn	1130302	1130353	.	-	.	Parent=CGI_10026574;
	scaffold145	TRF	Tandem_Repeat	1130302	1130353	97	+	.	.
scaffold145	subtractBed	intrn	1137805	1138182	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137805	1138182	206	-	.	.
scaffold145	subtractBed	intrn	1137508	1137801	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137508	1137801	35	-	.	.
scaffold145	subtractBed	intrn	1138262	1138495	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-X	1138262	1138495	34	-	.	.
scaffold145	subtractBed	intrn	1137631	1138191	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137631	1138191	85	-	.	.
scaffold145	subtractBed	intrn	1138274	1138450	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_Jockey	1138274	1138450	49	-	.	.
scaffold145	subtractBed	intrn	1137426	1137560	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137426	1137560	63	-	.	.
scaffold145	subtractBed	intrn	1137375	1137575	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137375	1137575	41	-	.	.
scaffold145	subtractBed	intrn	1137736	1138227	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137736	1138227	131	-	.	.
scaffold145	subtractBed	intrn	1137477	1137575	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137477	1137575	56	-	.	.
scaffold145	subtractBed	intrn	1138259	1138369	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1138259	1138369	95	-	.	.
scaffold145	subtractBed	intrn	1139296	1139721	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1139296	1139721	32	-	.	.
scaffold145	subtractBed	intrn	1138196	1138411	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1138196	1138411	67	-	.	.
scaffold145	subtractBed	intrn	1137332	1137385	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1137332	1137385	29	-	.	.
scaffold145	subtractBed	intrn	1138262	1138408	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1138262	1138408	68	-	.	.
scaffold145	subtractBed	intrn	1139494	1139739	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1139494	1139739	35	-	.	.
scaffold145	subtractBed	intrn	1139599	1139739	.	-	.	Parent=CGI_10026575;
	scaffold145	WUBlastX	LINE_RTE-BovB	1139599	1139739	66	-	.	.
scaffold145	subtractBed	intrn	1150006	1150250	.	+	.	Parent=CGI_10026576;
	scaffold145	TRF	Tandem_Repeat	1150006	1150250	400	+	.	.
scaffold145	subtractBed	intrn	1152131	1152340	.	+	.	Parent=CGI_10026576;
	scaffold145	WUBlastX	LTR_Gypsy	1152131	1152340	21	+	.	.
scaffold145	subtractBed	intrn	1152612	1154594	.	+	.	Parent=CGI_10026576;
	scaffold145	WUBlastX	LTR_DIRS	1152612	1154594	780	+	.	.
scaffold145	subtractBed	intrn	1154486	1155385	.	+	.	Parent=CGI_10026576;
	scaffold145	WUBlastX	LTR_DIRS	1154486	1155385	382	+	.	.
scaffold145	subtractBed	intrn	1152507	1154252	.	+	.	Parent=CGI_10026576;
	scaffold145	WUBlastX	LTR_DIRS	1152507	1154252	908	+	.	.
scaffold145	subtractBed	intrn	1152318	1153244	.	+	.	Parent=CGI_10026576;
	scaffold145	WUBlastX	LTR_Gypsy	1152318	1153244	32	+	.	.
scaffold145	subtractBed	intrn	1159803	1159844	.	+	.	Parent=CGI_10026576;
	scaffold145	TRF	Tandem_Repeat	1159803	1159844	68	+	.	.
scaffold145	subtractBed	intrn	1159804	1159841	.	+	.	Parent=CGI_10026576;
	scaffold145	TRF	Tandem_Repeat	1159804	1159841	51	+	.	.
scaffold1452	subtractBed	intrn	193318	193371	.	-	.	Parent=CGI_10010097;
	scaffold1452	TRF	Tandem_Repeat	193318	193371	74	+	.	.
scaffold1452	subtractBed	intrn	200967	200991	.	-	.	Parent=CGI_10010097;
	scaffold1452	TRF	Tandem_Repeat	200967	200991	50	+	.	.
scaffold1454	subtractBed	intrn	9701	9750	.	-	.	Parent=CGI_10004310;
	scaffold1454	TRF	Tandem_Repeat	9701	9750	100	+	.	.
scaffold1454	subtractBed	intrn	8764	9120	.	-	.	Parent=CGI_10004310;
	scaffold1454	WUBlastX	DNA_TcMar-Tc1	8764	9120	37	-	.	.
scaffold1454	subtractBed	intrn	8740	9048	.	-	.	Parent=CGI_10004310;
	scaffold1454	WUBlastX	DNA_TcMar-Tc1	8740	9048	39	-	.	.
scaffold1454	subtractBed	intrn	55871	56437	.	-	.	Parent=CGI_10004313;
	scaffold1454	WUBlastX	RC_Helitron	55871	56437	240	-	.	.
scaffold1454	subtractBed	intrn	55964	56632	.	-	.	Parent=CGI_10004313;
	scaffold1454	WUBlastX	DNA_Helitron	55964	56632	268	-	.	.
scaffold1454	subtractBed	intrn	63934	64416	.	-	.	Parent=CGI_10004314;
	scaffold1454	WUBlastX	DNA_Zator	63934	64416	113	-	.	.
scaffold1454	subtractBed	intrn	66359	66406	.	-	.	Parent=CGI_10004314;
	scaffold1454	WUBlastX	LTR_ERV1	66359	66406	28	-	.	.
scaffold1454	subtractBed	intrn	66350	66406	.	-	.	Parent=CGI_10004314;
	scaffold1454	WUBlastX	LTR_ERV1	66350	66406	26	-	.	.
scaffold1454	subtractBed	intrn	66278	66556	.	-	.	Parent=CGI_10004314;
	scaffold1454	WUBlastX	LTR_ERV1	66278	66556	23	-	.	.
scaffold1455	subtractBed	intrn	3400	3527	.	+	.	Parent=CGI_10003298;
	scaffold1455	TRF	Tandem_Repeat	3400	3527	102	+	.	.
scaffold1455	subtractBed	intrn	6762	6803	.	+	.	Parent=CGI_10003298;
	scaffold1455	TRF	Tandem_Repeat	6762	6803	84	+	.	.
scaffold1455	subtractBed	intrn	26202	26248	.	-	.	Parent=CGI_10003299;
	scaffold1455	TRF	Tandem_Repeat	26202	26248	58	+	.	.
scaffold1455	subtractBed	intrn	26202	26248	.	-	.	Parent=CGI_10003299;
	scaffold1455	TRF	Tandem_Repeat	26202	26248	76	+	.	.
scaffold1455	subtractBed	intrn	26958	27006	.	-	.	Parent=CGI_10003299;
	scaffold1455	TRF	Tandem_Repeat	26958	27006	98	+	.	.
scaffold1455	subtractBed	intrn	57372	58085	.	-	.	Parent=CGI_10003301;
	scaffold1455	WUBlastX	LTR_Gypsy	57372	58085	83	-	.	.
scaffold1456	subtractBed	intrn	143743	144156	.	+	.	Parent=CGI_10007784;
	scaffold1456	TRF	Tandem_Repeat	143729	144156	676	+	.	.
scaffold1456	subtractBed	intrn	147292	147321	.	-	.	Parent=CGI_10007785;
	scaffold1456	TRF	Tandem_Repeat	147292	147321	60	+	.	.
scaffold1456	subtractBed	intrn	188071	188291	.	-	.	Parent=CGI_10007787;
	scaffold1456	TRF	Tandem_Repeat	188071	188291	302	+	.	.
scaffold1456	subtractBed	intrn	189077	189216	.	-	.	Parent=CGI_10007787;
	scaffold1456	TRF	Tandem_Repeat	189077	189216	122	+	.	.
scaffold1459	subtractBed	intrn	11004	11480	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	11004	11480	114	+	.	.
scaffold1459	subtractBed	intrn	10504	10599	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	10504	10599	31	+	.	.
scaffold1459	subtractBed	intrn	10230	10505	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	10230	10505	42	+	.	.
scaffold1459	subtractBed	intrn	10541	10936	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	10541	10936	90	+	.	.
scaffold1459	subtractBed	intrn	10652	10987	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	10652	10987	60	+	.	.
scaffold1459	subtractBed	intrn	10248	10445	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	10248	10445	63	+	.	.
scaffold1459	subtractBed	intrn	15304	15768	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	15304	15768	193	+	.	.
scaffold1459	subtractBed	intrn	16042	16113	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	16042	16113	25	+	.	.
scaffold1459	subtractBed	intrn	15346	16080	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	15346	16080	114	+	.	.
scaffold1459	subtractBed	intrn	15340	15711	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	15340	15711	225	+	.	.
scaffold1459	subtractBed	intrn	15229	15711	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	15229	15711	119	+	.	.
scaffold1459	subtractBed	intrn	17798	17914	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	17798	17914	20	+	.	.
scaffold1459	subtractBed	intrn	16544	16837	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	16544	16837	56	+	.	.
scaffold1459	subtractBed	intrn	16104	16487	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	16104	16487	66	+	.	.
scaffold1459	subtractBed	intrn	16116	16427	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1	16116	16427	84	+	.	.
scaffold1459	subtractBed	intrn	16161	16424	.	-	.	Parent=CGI_10010100;
	scaffold1459	WUBlastX	LINE_L1-Tx1	16161	16424	108	+	.	.
scaffold1459	subtractBed	intrn	106127	109819	.	-	.	Parent=CGI_10010107;
	scaffold1459	WUBlastX	LTR_Gypsy	106127	109819	1149	+	.	.
scaffold1459	subtractBed	intrn	109760	109852	.	-	.	Parent=CGI_10010107;
	scaffold1459	WUBlastX	LTR_Copia	109760	109852	29	+	.	.
scaffold1459	subtractBed	intrn	110081	110236	.	-	.	Parent=CGI_10010107;
	scaffold1459	WUBlastX	LTR_Gypsy	110081	110236	20	+	.	.
scaffold1459	subtractBed	intrn	105470	105886	.	-	.	Parent=CGI_10010107;
	scaffold1459	WUBlastX	LTR_Gypsy	105470	105886	44	+	.	.
scaffold1459	subtractBed	intrn	105614	109222	.	-	.	Parent=CGI_10010107;
	scaffold1459	WUBlastX	LTR_Gypsy	105614	109222	1229	+	.	.
scaffold1459	subtractBed	intrn	114643	114672	.	-	.	Parent=CGI_10010107;
	scaffold1459	TRF	Tandem_Repeat	114643	114672	60	+	.	.
scaffold1459	subtractBed	intrn	205904	205929	.	-	.	Parent=CGI_10010114;
	scaffold1459	TRF	Tandem_Repeat	205904	205929	52	+	.	.
scaffold1459	subtractBed	intrn	214141	214221	.	-	.	Parent=CGI_10010114;
	scaffold1459	TRF	Tandem_Repeat	214141	214221	65	+	.	.
scaffold1459	subtractBed	intrn	214170	214207	.	-	.	Parent=CGI_10010114;
	scaffold1459	TRF	Tandem_Repeat	214170	214207	67	+	.	.
scaffold1459	subtractBed	intrn	214255	214554	.	-	.	Parent=CGI_10010114;
	scaffold1459	WUBlastX	LINE_L1-Tx1	214255	214554	43	-	.	.
scaffold146	subtractBed	intrn	15977	16372	.	+	.	Parent=CGI_10024878;
	scaffold146	WUBlastX	LINE_CR1-L2	15977	16372	20	+	.	.
scaffold146	subtractBed	intrn	17125	17162	.	+	.	Parent=CGI_10024878;
	scaffold146	TRF	Tandem_Repeat	17125	17162	67	+	.	.
scaffold146	subtractBed	intrn	19081	19130	.	+	.	Parent=CGI_10024878;
	scaffold146	TRF	Tandem_Repeat	19081	19130	100	+	.	.
scaffold146	subtractBed	intrn	19350	19683	.	+	.	Parent=CGI_10024878;
	scaffold146	TRF	Tandem_Repeat	19350	19683	404	+	.	.
scaffold146	subtractBed	intrn	19749	19807	.	+	.	Parent=CGI_10024878;
	scaffold146	TRF	Tandem_Repeat	19749	19807	118	+	.	.
scaffold146	subtractBed	intrn	16040	16423	.	+	.	Parent=CGI_10024878;
	scaffold146	WUBlastX	LINE_L2	16040	16423	97	+	.	.
scaffold146	subtractBed	intrn	41930	41957	.	+	.	Parent=CGI_10024882;
	scaffold146	TRF	Tandem_Repeat	41930	41957	56	+	.	.
scaffold146	subtractBed	intrn	47549	47596	.	+	.	Parent=CGI_10024882;
	scaffold146	TRF	Tandem_Repeat	47549	47596	96	+	.	.
scaffold146	subtractBed	intrn	85067	85979	.	+	.	Parent=CGI_10024885;
	scaffold146	TRF	Tandem_Repeat	85067	85979	1105	+	.	.
scaffold146	subtractBed	intrn	150883	150924	.	+	.	Parent=CGI_10024887;
	scaffold146	TRF	Tandem_Repeat	150883	150924	77	+	.	.
scaffold146	subtractBed	intrn	150923	150956	.	+	.	Parent=CGI_10024887;
	scaffold146	TRF	Tandem_Repeat	150923	150956	68	+	.	.
scaffold146	subtractBed	intrn	178176	178634	.	+	.	Parent=CGI_10024889;
	scaffold146	TRF	Tandem_Repeat	178176	178634	659	+	.	.
scaffold146	subtractBed	intrn	178704	179490	.	+	.	Parent=CGI_10024889;
	scaffold146	TRF	Tandem_Repeat	178704	179490	1028	+	.	.
scaffold146	subtractBed	intrn	178704	179489	.	+	.	Parent=CGI_10024889;
	scaffold146	TRF	Tandem_Repeat	178704	179489	1201	+	.	.
scaffold146	subtractBed	intrn	210206	210248	.	+	.	Parent=CGI_10024892;
	scaffold146	TRF	Tandem_Repeat	210206	210248	86	+	.	.
scaffold146	subtractBed	intrn	219504	219866	.	+	.	Parent=CGI_10024892;
	scaffold146	TRF	Tandem_Repeat	219504	219866	379	+	.	.
scaffold146	subtractBed	intrn	240569	241435	.	+	.	Parent=CGI_10024892;
	scaffold146	TRF	Tandem_Repeat	240569	241435	915	+	.	.
scaffold146	subtractBed	intrn	348651	348761	.	-	.	Parent=CGI_10024897;
	scaffold146	TRF	Tandem_Repeat	348651	348761	152	+	.	.
scaffold146	subtractBed	intrn	350736	350894	.	-	.	Parent=CGI_10024897;
	scaffold146	TRF	Tandem_Repeat	350736	350894	156	+	.	.
scaffold146	subtractBed	intrn	355601	355645	.	-	.	Parent=CGI_10024897;
	scaffold146	TRF	Tandem_Repeat	355601	355645	63	+	.	.
scaffold146	subtractBed	intrn	433327	433354	.	+	.	Parent=CGI_10024905;
	scaffold146	TRF	Tandem_Repeat	433327	433354	56	+	.	.
scaffold146	subtractBed	intrn	434148	434188	.	+	.	Parent=CGI_10024905;
	scaffold146	TRF	Tandem_Repeat	434148	434188	73	+	.	.
scaffold146	subtractBed	intrn	438182	438219	.	+	.	Parent=CGI_10024905;
	scaffold146	TRF	Tandem_Repeat	438182	438219	76	+	.	.
scaffold146	subtractBed	intrn	453061	453348	.	-	.	Parent=CGI_10024906;
	scaffold146	WUBlastX	LINE_RTE-X	453061	453348	118	-	.	.
scaffold146	subtractBed	intrn	453034	453384	.	-	.	Parent=CGI_10024906;
	scaffold146	WUBlastX	LINE_RTE-X	453034	453384	96	-	.	.
scaffold146	subtractBed	intrn	475479	475737	.	+	.	Parent=CGI_10024909;
	scaffold146	TRF	Tandem_Repeat	475479	475737	394	+	.	.
scaffold146	subtractBed	intrn	475479	475781	.	+	.	Parent=CGI_10024909;
	scaffold146	TRF	Tandem_Repeat	475479	475781	392	+	.	.
scaffold146	subtractBed	intrn	619152	619190	.	-	.	Parent=CGI_10024915;
	scaffold146	TRF	Tandem_Repeat	619152	619190	62	+	.	.
scaffold146	subtractBed	intrn	624937	625695	.	-	.	Parent=CGI_10024915;
	scaffold146	WUBlastX	LINE_L1-Tx1	624937	625695	152	-	.	.
scaffold146	subtractBed	intrn	624787	625665	.	-	.	Parent=CGI_10024915;
	scaffold146	WUBlastX	LINE_L1-Tx1	624787	625665	118	-	.	.
scaffold146	subtractBed	intrn	646532	646571	.	-	.	Parent=CGI_10024916;
	scaffold146	TRF	Tandem_Repeat	646532	646571	71	+	.	.
scaffold146	subtractBed	intrn	641979	642203	.	-	.	Parent=CGI_10024916;
	scaffold146	WUBlastX	LINE_L1-Tx1	641979	642203	45	-	.	.
scaffold146	subtractBed	intrn	643735	643986	.	-	.	Parent=CGI_10024916;
	scaffold146	WUBlastX	LINE_Penelope	643735	643986	46	-	.	.
scaffold146	subtractBed	intrn	643747	644151	.	-	.	Parent=CGI_10024916;
	scaffold146	WUBlastX	LINE_Penelope	643747	644151	23	-	.	.
scaffold146	subtractBed	intrn	643774	644052	.	-	.	Parent=CGI_10024916;
	scaffold146	WUBlastX	LINE_Penelope	643774	644052	60	-	.	.
scaffold146	subtractBed	intrn	675155	675198	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	675155	675198	88	+	.	.
scaffold146	subtractBed	intrn	682438	682493	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	682438	682493	103	+	.	.
scaffold146	subtractBed	intrn	687974	688017	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	687974	688017	88	+	.	.
scaffold146	subtractBed	intrn	697913	697990	.	-	.	Parent=CGI_10024919;
	scaffold146	WUBlastX	DNA_hAT-hATw	697913	698413	28	-	.	.
scaffold146	subtractBed	intrn	698388	698413	.	-	.	Parent=CGI_10024919;
	scaffold146	WUBlastX	DNA_hAT-hATw	697913	698413	28	-	.	.
scaffold146	subtractBed	intrn	699737	699774	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	699737	699774	76	+	.	.
scaffold146	subtractBed	intrn	709789	710034	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	709789	710034	219	+	.	.
scaffold146	subtractBed	intrn	724033	724083	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	724033	724083	102	+	.	.
scaffold146	subtractBed	intrn	735632	735730	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	735632	735730	103	+	.	.
scaffold146	subtractBed	intrn	738550	738593	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	738550	738593	79	+	.	.
scaffold146	subtractBed	intrn	744529	744579	.	-	.	Parent=CGI_10024919;
	scaffold146	TRF	Tandem_Repeat	744529	744579	75	+	.	.
scaffold146	subtractBed	intrn	793684	793918	.	+	.	Parent=CGI_10024921;
	scaffold146	TRF	Tandem_Repeat	793684	793918	150	+	.	.
scaffold146	subtractBed	intrn	799891	799969	.	+	.	Parent=CGI_10024921;
	scaffold146	TRF	Tandem_Repeat	799891	799969	95	+	.	.
scaffold146	subtractBed	intrn	842599	842603	.	+	.	Parent=CGI_10024922;
	scaffold146	WUBlastX	LTR_Gypsy	842599	842772	27	+	.	.
scaffold146	subtractBed	intrn	843790	844147	.	+	.	Parent=CGI_10024922;
	scaffold146	TRF	Tandem_Repeat	843790	844147	475	+	.	.
scaffold146	subtractBed	intrn	902986	903259	.	-	.	Parent=CGI_10024925;
	scaffold146	TRF	Tandem_Repeat	902986	903259	362	+	.	.
scaffold146	subtractBed	intrn	902962	903259	.	-	.	Parent=CGI_10024925;
	scaffold146	TRF	Tandem_Repeat	902962	903259	377	+	.	.
scaffold146	subtractBed	intrn	980205	980247	.	-	.	Parent=CGI_10024927;
	scaffold146	TRF	Tandem_Repeat	980205	980247	63	+	.	.
scaffold1462	subtractBed	intrn	134344	136353	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	DNA_Zator	134344	136353	1133	+	.	.
scaffold1462	subtractBed	intrn	137249	137395	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	DNA_Zator	137249	137395	107	+	.	.
scaffold1462	subtractBed	intrn	137492	138046	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	DNA_Zator	137492	138046	101	+	.	.
scaffold1462	subtractBed	intrn	138778	138903	.	+	.	Parent=CGI_10014372;
	scaffold1462	TRF	Tandem_Repeat	138778	138903	173	+	.	.
scaffold1462	subtractBed	intrn	146023	146049	.	+	.	Parent=CGI_10014372;
	scaffold1462	TRF	Tandem_Repeat	146023	146049	54	+	.	.
scaffold1462	subtractBed	intrn	158448	158558	.	+	.	Parent=CGI_10014372;
	scaffold1462	TRF	Tandem_Repeat	158448	158558	138	+	.	.
scaffold1462	subtractBed	intrn	159480	159701	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	LINE_L2	159480	159701	117	-	.	.
scaffold1462	subtractBed	intrn	159567	159752	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	LINE_L2	159567	159752	104	-	.	.
scaffold1462	subtractBed	intrn	159567	159827	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	LINE_L2	159567	159827	25	-	.	.
scaffold1462	subtractBed	intrn	159367	159561	.	+	.	Parent=CGI_10014372;
	scaffold1462	WUBlastX	LINE_L2	159367	159561	71	-	.	.
scaffold1462	subtractBed	intrn	229491	229547	.	+	.	Parent=CGI_10014376;
	scaffold1462	TRF	Tandem_Repeat	229491	229547	114	+	.	.
scaffold1462	subtractBed	intrn	232997	233027	.	+	.	Parent=CGI_10014376;
	scaffold1462	TRF	Tandem_Repeat	232997	233027	62	+	.	.
scaffold1462	subtractBed	intrn	233622	234602	.	+	.	Parent=CGI_10014376;
	scaffold1462	TRF	Tandem_Repeat	233622	234602	1179	+	.	.
scaffold1462	subtractBed	intrn	255086	255113	.	+	.	Parent=CGI_10014378;
	scaffold1462	TRF	Tandem_Repeat	255086	255113	56	+	.	.
scaffold1462	subtractBed	intrn	256402	257920	.	+	.	Parent=CGI_10014378;
	scaffold1462	TRF	Tandem_Repeat	256402	257920	2253	+	.	.
scaffold1462	subtractBed	intrn	255595	257920	.	+	.	Parent=CGI_10014378;
	scaffold1462	TRF	Tandem_Repeat	255595	257920	2447	+	.	.
scaffold1462	subtractBed	intrn	255579	257920	.	+	.	Parent=CGI_10014378;
	scaffold1462	TRF	Tandem_Repeat	255579	257920	2473	+	.	.
scaffold1462	subtractBed	intrn	258090	258163	.	+	.	Parent=CGI_10014378;
	scaffold1462	TRF	Tandem_Repeat	258090	258163	69	+	.	.
scaffold1462	subtractBed	intrn	306404	306730	.	-	.	Parent=CGI_10014383;
	scaffold1462	WUBlastX	LINE_RTE-BovB	306404	306730	49	+	.	.
scaffold1462	subtractBed	intrn	306724	306948	.	-	.	Parent=CGI_10014383;
	scaffold1462	WUBlastX	LINE_RTE-BovB	306724	306948	90	+	.	.
scaffold1462	subtractBed	intrn	306305	306391	.	-	.	Parent=CGI_10014383;
	scaffold1462	WUBlastX	LINE_RTE-BovB	306305	306391	53	+	.	.
scaffold1462	subtractBed	intrn	306593	306739	.	-	.	Parent=CGI_10014383;
	scaffold1462	WUBlastX	LINE_RTE-BovB	306593	306739	70	+	.	.
scaffold1462	subtractBed	intrn	325355	325408	.	-	.	Parent=CGI_10014383;
	scaffold1462	TRF	Tandem_Repeat	325355	325408	99	+	.	.
scaffold1462	subtractBed	intrn	326753	326793	.	-	.	Parent=CGI_10014383;
	scaffold1462	TRF	Tandem_Repeat	326753	326793	82	+	.	.
scaffold1462	subtractBed	intrn	355000	355048	.	+	.	Parent=CGI_10014386;
	scaffold1462	TRF	Tandem_Repeat	355000	355048	50	+	.	.
scaffold1462	subtractBed	intrn	348403	349026	.	+	.	Parent=CGI_10014386;
	scaffold1462	WUBlastX	DNA_Maverick	348403	349026	409	-	.	.
scaffold1462	subtractBed	intrn	359430	359543	.	+	.	Parent=CGI_10014386;
	scaffold1462	WUBlastX	DNA_Harbinger	359430	359543	68	-	.	.
scaffold1462	subtractBed	intrn	359533	359664	.	+	.	Parent=CGI_10014386;
	scaffold1462	WUBlastX	DNA_Harbinger	359533	359664	32	-	.	.
scaffold1462	subtractBed	intrn	367149	371852	.	+	.	Parent=CGI_10014386;
	scaffold1462	WUBlastX	RC_Helitron	367149	371852	2664	-	.	.
scaffold1462	subtractBed	intrn	373087	374090	.	+	.	Parent=CGI_10014386;
	scaffold1462	TRF	Tandem_Repeat	373087	374090	1085	+	.	.
scaffold1462	subtractBed	intrn	373075	374090	.	+	.	Parent=CGI_10014386;
	scaffold1462	TRF	Tandem_Repeat	373075	374090	1892	+	.	.
scaffold1462	subtractBed	intrn	372375	372995	.	+	.	Parent=CGI_10014386;
	scaffold1462	WUBlastX	RC_Helitron	372375	372995	374	-	.	.
scaffold1462	subtractBed	intrn	378762	378820	.	+	.	Parent=CGI_10014386;
	scaffold1462	TRF	Tandem_Repeat	378762	378820	109	+	.	.
scaffold1462	subtractBed	intrn	367149	371852	.	-	.	Parent=CGI_10014387;
	scaffold1462	WUBlastX	RC_Helitron	367149	371852	2664	-	.	.
scaffold1462	subtractBed	intrn	373087	374090	.	-	.	Parent=CGI_10014387;
	scaffold1462	TRF	Tandem_Repeat	373087	374090	1085	+	.	.
scaffold1462	subtractBed	intrn	373075	374090	.	-	.	Parent=CGI_10014387;
	scaffold1462	TRF	Tandem_Repeat	373075	374090	1892	+	.	.
scaffold1462	subtractBed	intrn	372375	372995	.	-	.	Parent=CGI_10014387;
	scaffold1462	WUBlastX	RC_Helitron	372375	372995	374	-	.	.
scaffold1462	subtractBed	intrn	396495	396497	.	+	.	Parent=CGI_10014389;
	scaffold1462	WUBlastX	DNA_IS4EU	396186	396497	54	+	.	.
scaffold1464	subtractBed	intrn	2558	2998	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	2558	2998	303	+	.	.
scaffold1464	subtractBed	intrn	2336	2596	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	2336	2596	78	+	.	.
scaffold1464	subtractBed	intrn	2980	3441	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	2980	3441	314	+	.	.
scaffold1464	subtractBed	intrn	2423	2977	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	2423	2977	235	+	.	.
scaffold1464	subtractBed	intrn	2378	2596	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	2378	2596	88	+	.	.
scaffold1464	subtractBed	intrn	3016	3591	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LTR_Gypsy	3016	3591	187	+	.	.
scaffold1464	subtractBed	intrn	6982	7284	.	+	.	Parent=CGI_10003234;
	scaffold1464	WUBlastX	LINE_Penelope	6982	7284	31	-	.	.
scaffold1464	subtractBed	intrn	49012	49049	.	+	.	Parent=CGI_10003238;
	scaffold1464	TRF	Tandem_Repeat	49012	49049	76	+	.	.
scaffold1464	subtractBed	intrn	53124	53183	.	+	.	Parent=CGI_10003238;
	scaffold1464	TRF	Tandem_Repeat	53124	53183	120	+	.	.
scaffold1464	subtractBed	intrn	61710	61750	.	+	.	Parent=CGI_10003238;
	scaffold1464	TRF	Tandem_Repeat	61710	61750	82	+	.	.
scaffold1467	subtractBed	intrn	10390	10423	.	-	.	Parent=CGI_10005083;
	scaffold1467	TRF	Tandem_Repeat	10390	10423	50	+	.	.
scaffold1467	subtractBed	intrn	10393	10436	.	-	.	Parent=CGI_10005083;
	scaffold1467	TRF	Tandem_Repeat	10393	10436	70	+	.	.
scaffold1467	subtractBed	intrn	15513	15546	.	-	.	Parent=CGI_10005083;
	scaffold1467	TRF	Tandem_Repeat	15513	15546	52	+	.	.
scaffold1467	subtractBed	intrn	81044	81070	.	-	.	Parent=CGI_10005087;
	scaffold1467	TRF	Tandem_Repeat	81044	81070	54	+	.	.
scaffold1467	subtractBed	intrn	113436	113467	.	-	.	Parent=CGI_10005089;
	scaffold1467	TRF	Tandem_Repeat	113436	113467	64	+	.	.
scaffold1467	subtractBed	intrn	113971	114004	.	-	.	Parent=CGI_10005089;
	scaffold1467	TRF	Tandem_Repeat	113971	114004	59	+	.	.
scaffold1467	subtractBed	intrn	114754	115554	.	-	.	Parent=CGI_10005089;
	scaffold1467	TRF	Tandem_Repeat	114754	115554	1284	+	.	.
scaffold1468	subtractBed	intrn	53913	54506	.	-	.	Parent=CGI_10006770;
	scaffold1468	TRF	Tandem_Repeat	53913	54506	713	+	.	.
scaffold1468	subtractBed	intrn	53925	54506	.	-	.	Parent=CGI_10006770;
	scaffold1468	TRF	Tandem_Repeat	53925	54506	832	+	.	.
scaffold1468	subtractBed	intrn	53913	54506	.	-	.	Parent=CGI_10006770;
	scaffold1468	TRF	Tandem_Repeat	53913	54506	750	+	.	.
scaffold1468	subtractBed	intrn	142167	142193	.	+	.	Parent=CGI_10006780;
	scaffold1468	TRF	Tandem_Repeat	142167	142193	54	+	.	.
scaffold1469	subtractBed	intrn	65454	65604	.	+	.	Parent=CGI_10015411;
	scaffold1469	TRF	Tandem_Repeat	65454	65604	230	+	.	.
scaffold1469	subtractBed	intrn	123561	123628	.	+	.	Parent=CGI_10015414;
	scaffold1469	TRF	Tandem_Repeat	123561	123628	136	+	.	.
scaffold1469	subtractBed	intrn	129749	129800	.	+	.	Parent=CGI_10015414;
	scaffold1469	TRF	Tandem_Repeat	129749	129800	104	+	.	.
scaffold1469	subtractBed	intrn	155351	155393	.	+	.	Parent=CGI_10015414;
	scaffold1469	TRF	Tandem_Repeat	155351	155393	86	+	.	.
scaffold1469	subtractBed	intrn	241606	242149	.	-	.	Parent=CGI_10015418;
	scaffold1469	TRF	Tandem_Repeat	241606	242149	633	+	.	.
scaffold1469	subtractBed	intrn	253606	253638	.	-	.	Parent=CGI_10015420;
	scaffold1469	TRF	Tandem_Repeat	253606	253638	57	+	.	.
scaffold1469	subtractBed	intrn	256703	257957	.	-	.	Parent=CGI_10015422;
	scaffold1469	TRF	Tandem_Repeat	256703	257957	1396	+	.	.
scaffold1469	subtractBed	intrn	256703	257957	.	-	.	Parent=CGI_10015422;
	scaffold1469	TRF	Tandem_Repeat	256703	257957	1468	+	.	.
scaffold1469	subtractBed	intrn	303013	303055	.	+	.	Parent=CGI_10015425;
	scaffold1469	TRF	Tandem_Repeat	303013	303055	86	+	.	.
scaffold1469	subtractBed	intrn	331240	334059	.	-	.	Parent=CGI_10015428;
	scaffold1469	WUBlastX	DNA_Zator	331240	334059	1412	+	.	.
scaffold1469	subtractBed	intrn	334210	334389	.	-	.	Parent=CGI_10015428;
	scaffold1469	WUBlastX	DNA_Zator	334210	334389	64	+	.	.
scaffold1469	subtractBed	intrn	334853	335020	.	-	.	Parent=CGI_10015428;
	scaffold1469	WUBlastX	DNA_Zator	334853	335020	51	+	.	.
scaffold1470	subtractBed	intrn	3477	3802	.	-	.	Parent=CGI_10003541;
	scaffold1470	TRF	Tandem_Repeat	3477	3802	471	+	.	.
scaffold1470	subtractBed	intrn	3477	3802	.	-	.	Parent=CGI_10003541;
	scaffold1470	TRF	Tandem_Repeat	3477	3802	481	+	.	.
scaffold1473	subtractBed	intrn	15282	15560	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L1-Tx1	15282	15560	71	-	.	.
scaffold1473	subtractBed	intrn	15348	15608	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L1	15348	15608	58	-	.	.
scaffold1473	subtractBed	intrn	18337	18434	.	+	.	Parent=CGI_10003509;
	scaffold1473	TRF	Tandem_Repeat	18337	18434	169	+	.	.
scaffold1473	subtractBed	intrn	18659	19012	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	18659	19012	61	-	.	.
scaffold1473	subtractBed	intrn	18973	19476	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	18973	19476	26	-	.	.
scaffold1473	subtractBed	intrn	17173	17445	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	17173	17445	81	-	.	.
scaffold1473	subtractBed	intrn	17176	17586	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	17176	17586	37	-	.	.
scaffold1473	subtractBed	intrn	18668	18952	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	18668	18952	90	-	.	.
scaffold1473	subtractBed	intrn	17173	17502	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	17173	17502	68	-	.	.
scaffold1473	subtractBed	intrn	19105	19857	.	+	.	Parent=CGI_10003509;
	scaffold1473	WUBlastX	LINE_L2	19105	19857	127	-	.	.
scaffold1473	subtractBed	intrn	33582	33664	.	+	.	Parent=CGI_10003509;
	scaffold1473	TRF	Tandem_Repeat	33582	33664	166	+	.	.
scaffold1475	subtractBed	intrn	109002	109889	.	-	.	Parent=CGI_10005953;
	scaffold1475	WUBlastX	LINE_L1-Tx1	109002	109889	72	-	.	.
scaffold1475	subtractBed	intrn	136341	136397	.	-	.	Parent=CGI_10005954;
	scaffold1475	TRF	Tandem_Repeat	136341	136397	107	+	.	.
scaffold1475	subtractBed	intrn	137228	137278	.	-	.	Parent=CGI_10005954;
	scaffold1475	TRF	Tandem_Repeat	137228	137278	50	+	.	.
scaffold1476	subtractBed	intrn	150606	151001	.	-	.	Parent=CGI_10009825;
	scaffold1476	TRF	Tandem_Repeat	150606	151001	516	+	.	.
scaffold1476	subtractBed	intrn	158393	158427	.	-	.	Parent=CGI_10009825;
	scaffold1476	TRF	Tandem_Repeat	158393	158427	61	+	.	.
scaffold1476	subtractBed	intrn	160384	160753	.	-	.	Parent=CGI_10009825;
	scaffold1476	TRF	Tandem_Repeat	160384	160753	490	+	.	.
scaffold1476	subtractBed	intrn	160815	160931	.	-	.	Parent=CGI_10009825;
	scaffold1476	TRF	Tandem_Repeat	160815	160931	234	+	.	.
scaffold1476	subtractBed	intrn	160913	161234	.	-	.	Parent=CGI_10009825;
	scaffold1476	TRF	Tandem_Repeat	160913	161234	278	+	.	.
scaffold1476	subtractBed	intrn	175811	176630	.	+	.	Parent=CGI_10009826;
	scaffold1476	TRF	Tandem_Repeat	175811	176630	833	+	.	.
scaffold1476	subtractBed	intrn	170899	171075	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_CR1-L2	170899	171075	20	+	.	.
scaffold1476	subtractBed	intrn	171850	171954	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_L2	171850	171954	32	+	.	.
scaffold1476	subtractBed	intrn	172540	173721	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	172540	173721	54	-	.	.
scaffold1476	subtractBed	intrn	173715	174107	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	173715	174107	111	-	.	.
scaffold1476	subtractBed	intrn	171114	171506	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_CR1-L2	171114	171506	108	+	.	.
scaffold1476	subtractBed	intrn	172540	172662	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	172540	172662	73	-	.	.
scaffold1476	subtractBed	intrn	173940	174137	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_Jockey	173940	174137	73	-	.	.
scaffold1476	subtractBed	intrn	172389	172553	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_CR1-L2	172389	172553	21	+	.	.
scaffold1476	subtractBed	intrn	175116	175187	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	175116	175187	23	-	.	.
scaffold1476	subtractBed	intrn	172510	172632	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	172510	172632	29	-	.	.
scaffold1476	subtractBed	intrn	170987	171127	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_L2	170987	171127	44	+	.	.
scaffold1476	subtractBed	intrn	171503	171628	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_CR1-L2	171503	171628	62	+	.	.
scaffold1476	subtractBed	intrn	171063	171215	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_CR1	171063	171215	63	+	.	.
scaffold1476	subtractBed	intrn	173026	173754	.	+	.	Parent=CGI_10009826;
	scaffold1476	WUBlastX	LINE_RTE-X	173026	173754	157	-	.	.
scaffold1476	subtractBed	intrn	228985	229025	.	+	.	Parent=CGI_10009827;
	scaffold1476	TRF	Tandem_Repeat	228985	229025	55	+	.	.
scaffold1476	subtractBed	intrn	240305	240404	.	-	.	Parent=CGI_10009828;
	scaffold1476	TRF	Tandem_Repeat	240305	240404	191	+	.	.
scaffold1476	subtractBed	intrn	240736	240776	.	-	.	Parent=CGI_10009828;
	scaffold1476	TRF	Tandem_Repeat	240736	240776	82	+	.	.
scaffold148	subtractBed	intrn	166882	166931	.	-	.	Parent=CGI_10008521;
	scaffold148	TRF	Tandem_Repeat	166882	166931	100	+	.	.
scaffold148	subtractBed	intrn	166961	167007	.	-	.	Parent=CGI_10008521;
	scaffold148	TRF	Tandem_Repeat	166961	167007	94	+	.	.
scaffold148	subtractBed	intrn	177351	177487	.	+	.	Parent=CGI_10008522;
	scaffold148	TRF	Tandem_Repeat	177351	177487	199	+	.	.
scaffold1480	subtractBed	intrn	134233	134280	.	-	.	Parent=CGI_10008637;
	scaffold1480	TRF	Tandem_Repeat	134233	134280	60	+	.	.
scaffold1480	subtractBed	intrn	134311	136268	.	-	.	Parent=CGI_10008637;
	scaffold1480	TRF	Tandem_Repeat	134311	136268	3020	+	.	.
scaffold1480	subtractBed	intrn	137670	138625	.	-	.	Parent=CGI_10008637;
	scaffold1480	WUBlastX	LINE_R2	137670	138692	160	-	.	.
scaffold1480	subtractBed	intrn	137673	138625	.	-	.	Parent=CGI_10008637;
	scaffold1480	WUBlastX	LINE_R2	137673	139004	108	-	.	.
scaffold1480	subtractBed	intrn	137673	138350	.	-	.	Parent=CGI_10008637;
	scaffold1480	WUBlastX	LINE_R2	137673	138350	203	-	.	.
scaffold1480	subtractBed	intrn	137670	138191	.	-	.	Parent=CGI_10008637;
	scaffold1480	WUBlastX	LINE_R2	137670	138191	271	-	.	.
scaffold1480	subtractBed	intrn	157844	159706	.	-	.	Parent=CGI_10008638;
	scaffold1480	WUBlastX	LINE_L1	157844	159706	244	-	.	.
scaffold1480	subtractBed	intrn	157646	159403	.	-	.	Parent=CGI_10008638;
	scaffold1480	WUBlastX	LINE_R2	157646	159403	898	-	.	.
scaffold1480	subtractBed	intrn	157083	157646	.	-	.	Parent=CGI_10008638;
	scaffold1480	WUBlastX	LINE_R2	157083	157646	288	-	.	.
scaffold1480	subtractBed	intrn	159699	160028	.	-	.	Parent=CGI_10008638;
	scaffold1480	WUBlastX	LINE_R2	159699	160028	144	-	.	.
scaffold1480	subtractBed	intrn	156975	157637	.	-	.	Parent=CGI_10008638;
	scaffold1480	WUBlastX	LINE_R2	156975	157637	95	-	.	.
scaffold1480	subtractBed	intrn	199341	199468	.	+	.	Parent=CGI_10008642;
	scaffold1480	TRF	Tandem_Repeat	199341	199468	96	+	.	.
scaffold1480	subtractBed	intrn	201728	201766	.	+	.	Parent=CGI_10008642;
	scaffold1480	TRF	Tandem_Repeat	201728	201766	78	+	.	.
scaffold1480	subtractBed	intrn	204514	204541	.	+	.	Parent=CGI_10008642;
	scaffold1480	TRF	Tandem_Repeat	204514	204541	56	+	.	.
scaffold1480	subtractBed	intrn	211427	211499	.	+	.	Parent=CGI_10008642;
	scaffold1480	TRF	Tandem_Repeat	211427	211499	67	+	.	.
scaffold1481	subtractBed	intrn	19276	19338	.	-	.	Parent=CGI_10003892;
	scaffold1481	TRF	Tandem_Repeat	19276	19338	69	+	.	.
scaffold1481	subtractBed	intrn	19272	19336	.	-	.	Parent=CGI_10003892;
	scaffold1481	TRF	Tandem_Repeat	19272	19336	68	+	.	.
scaffold1481	subtractBed	intrn	19272	19345	.	-	.	Parent=CGI_10003892;
	scaffold1481	TRF	Tandem_Repeat	19272	19345	52	+	.	.
scaffold1481	subtractBed	intrn	28368	28616	.	-	.	Parent=CGI_10003892;
	scaffold1481	WUBlastX	LINE_L1-Tx1	28368	28616	27	+	.	.
scaffold1481	subtractBed	intrn	28284	28559	.	-	.	Parent=CGI_10003892;
	scaffold1481	WUBlastX	LINE_L1-Tx1	28284	28559	73	+	.	.
scaffold1481	subtractBed	intrn	35836	35867	.	-	.	Parent=CGI_10003892;
	scaffold1481	TRF	Tandem_Repeat	35836	35867	64	+	.	.
scaffold1484	subtractBed	intrn	30070	30242	.	-	.	Parent=CGI_10013253;
	scaffold1484	TRF	Tandem_Repeat	30070	30242	64	+	.	.
scaffold1484	subtractBed	intrn	30021	30150	.	-	.	Parent=CGI_10013253;
	scaffold1484	TRF	Tandem_Repeat	30021	30150	84	+	.	.
scaffold1484	subtractBed	intrn	31192	31243	.	-	.	Parent=CGI_10013253;
	scaffold1484	TRF	Tandem_Repeat	31192	31243	104	+	.	.
scaffold1484	subtractBed	intrn	69688	69738	.	+	.	Parent=CGI_10013256;
	scaffold1484	TRF	Tandem_Repeat	69688	69738	102	+	.	.
scaffold1484	subtractBed	intrn	109307	109398	.	-	.	Parent=CGI_10013260;
	scaffold1484	TRF	Tandem_Repeat	109307	109398	71	+	.	.
scaffold1484	subtractBed	intrn	112094	112228	.	-	.	Parent=CGI_10013260;
	scaffold1484	TRF	Tandem_Repeat	112094	112228	89	+	.	.
scaffold1484	subtractBed	intrn	106762	107124	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_DIRS	106762	107124	29	-	.	.
scaffold1484	subtractBed	intrn	108110	108457	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	108110	108457	202	-	.	.
scaffold1484	subtractBed	intrn	108450	108716	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	108450	108716	170	-	.	.
scaffold1484	subtractBed	intrn	106684	107058	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	106684	107058	161	-	.	.
scaffold1484	subtractBed	intrn	107779	108111	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	107779	108111	140	-	.	.
scaffold1484	subtractBed	intrn	108710	108934	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	108710	108934	53	-	.	.
scaffold1484	subtractBed	intrn	108110	108886	.	-	.	Parent=CGI_10013260;
	scaffold1484	WUBlastX	LTR_Ngaro	108110	108886	119	-	.	.
scaffold1484	subtractBed	intrn	179562	179623	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	179562	179623	99	+	.	.
scaffold1484	subtractBed	intrn	180379	180485	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	180379	180485	133	+	.	.
scaffold1484	subtractBed	intrn	183302	183434	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	183302	183434	180	+	.	.
scaffold1484	subtractBed	intrn	185079	185762	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	185079	185762	794	+	.	.
scaffold1484	subtractBed	intrn	185929	185982	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	185929	185982	58	+	.	.
scaffold1484	subtractBed	intrn	189732	189846	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	189732	189846	196	+	.	.
scaffold1484	subtractBed	intrn	202758	202805	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	202758	202805	52	+	.	.
scaffold1484	subtractBed	intrn	202974	204138	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	202974	204138	1480	+	.	.
scaffold1484	subtractBed	intrn	208691	208821	.	+	.	Parent=CGI_10013262;
	scaffold1484	TRF	Tandem_Repeat	208691	208821	208	+	.	.
scaffold1484	subtractBed	intrn	319441	319507	.	-	.	Parent=CGI_10013270;
	scaffold1484	TRF	Tandem_Repeat	319441	319507	125	+	.	.
scaffold1484	subtractBed	intrn	324086	324122	.	+	.	Parent=CGI_10013271;
	scaffold1484	TRF	Tandem_Repeat	324086	324122	74	+	.	.
scaffold1484	subtractBed	intrn	347124	347161	.	-	.	Parent=CGI_10013272;
	scaffold1484	TRF	Tandem_Repeat	347124	347161	76	+	.	.
scaffold1485	subtractBed	intrn	6525	6572	.	+	.	Parent=CGI_10003288;
	scaffold1485	TRF	Tandem_Repeat	6525	6572	96	+	.	.
scaffold1485	subtractBed	intrn	6572	6609	.	+	.	Parent=CGI_10003288;
	scaffold1485	TRF	Tandem_Repeat	6572	6609	76	+	.	.
scaffold1485	subtractBed	intrn	29766	29778	.	+	.	Parent=CGI_10003290;
	scaffold1485	WUBlastX	DNA_hAT	29569	29778	66	+	.	.
scaffold1485	subtractBed	intrn	30773	31072	.	+	.	Parent=CGI_10003290;
	scaffold1485	TRF	Tandem_Repeat	30773	31072	519	+	.	.
scaffold1485	subtractBed	intrn	47885	47909	.	-	.	Parent=CGI_10003293;
	scaffold1485	TRF	Tandem_Repeat	47885	47909	50	+	.	.
scaffold1485	subtractBed	intrn	48294	48602	.	-	.	Parent=CGI_10003293;
	scaffold1485	WUBlastX	LINE_RTE-X	48294	48602	185	-	.	.
scaffold1485	subtractBed	intrn	48601	48606	.	-	.	Parent=CGI_10003293;
	scaffold1485	WUBlastX	LINE_RTE-X	48601	49017	194	-	.	.
scaffold1485	subtractBed	intrn	48165	48551	.	-	.	Parent=CGI_10003293;
	scaffold1485	WUBlastX	LINE_RTE-X	48165	48551	133	-	.	.
scaffold1488	subtractBed	intrn	31791	31822	.	+	.	Parent=CGI_10005177;
	scaffold1488	TRF	Tandem_Repeat	31791	31822	64	+	.	.
scaffold1488	subtractBed	intrn	51863	51912	.	+	.	Parent=CGI_10005177;
	scaffold1488	TRF	Tandem_Repeat	51863	51912	91	+	.	.
scaffold1488	subtractBed	intrn	96216	96554	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	96216	96554	32	+	.	.
scaffold1488	subtractBed	intrn	96273	96482	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	96273	96482	53	+	.	.
scaffold1488	subtractBed	intrn	96285	96545	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	96285	96545	36	+	.	.
scaffold1488	subtractBed	intrn	99748	100038	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	99748	100038	27	+	.	.
scaffold1488	subtractBed	intrn	99183	99683	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	99183	99683	217	-	.	.
scaffold1488	subtractBed	intrn	99039	99683	.	+	.	Parent=CGI_10005179;
	scaffold1488	WUBlastX	LINE_RTE-X	99039	99683	167	-	.	.
scaffold1488	subtractBed	intrn	115252	115350	.	+	.	Parent=CGI_10005179;
	scaffold1488	TRF	Tandem_Repeat	115252	115350	99	+	.	.
scaffold1488	subtractBed	intrn	116117	116250	.	+	.	Parent=CGI_10005179;
	scaffold1488	TRF	Tandem_Repeat	116117	116250	110	+	.	.
scaffold1488	subtractBed	intrn	119396	119936	.	+	.	Parent=CGI_10005179;
	scaffold1488	TRF	Tandem_Repeat	119396	119936	974	+	.	.
scaffold1489	subtractBed	intrn	41270	41376	.	-	.	Parent=CGI_10004845;
	scaffold1489	TRF	Tandem_Repeat	41270	41376	171	+	.	.
scaffold1489	subtractBed	intrn	87735	87786	.	-	.	Parent=CGI_10004848;
	scaffold1489	TRF	Tandem_Repeat	87735	87786	52	+	.	.
scaffold1489	subtractBed	intrn	88810	88870	.	-	.	Parent=CGI_10004848;
	scaffold1489	TRF	Tandem_Repeat	88810	88870	61	+	.	.
scaffold1489	subtractBed	intrn	88806	88869	.	-	.	Parent=CGI_10004848;
	scaffold1489	TRF	Tandem_Repeat	88806	88869	66	+	.	.
scaffold1489	subtractBed	intrn	90883	90964	.	-	.	Parent=CGI_10004848;
	scaffold1489	TRF	Tandem_Repeat	90883	90964	157	+	.	.
scaffold149	subtractBed	intrn	8185	8215	.	+	.	Parent=CGI_10025282;
	scaffold149	TRF	Tandem_Repeat	8185	8215	62	+	.	.
scaffold149	subtractBed	intrn	31293	31341	.	-	.	Parent=CGI_10025283;
	scaffold149	TRF	Tandem_Repeat	31293	31341	71	+	.	.
scaffold149	subtractBed	intrn	46763	46802	.	-	.	Parent=CGI_10025285;
	scaffold149	TRF	Tandem_Repeat	46763	46802	80	+	.	.
scaffold149	subtractBed	intrn	90086	90137	.	+	.	Parent=CGI_10025289;
	scaffold149	TRF	Tandem_Repeat	90086	90137	104	+	.	.
scaffold149	subtractBed	intrn	85595	85804	.	+	.	Parent=CGI_10025289;
	scaffold149	WUBlastX	LINE_L2	85595	85804	41	-	.	.
scaffold149	subtractBed	intrn	113132	113196	.	+	.	Parent=CGI_10025290;
	scaffold149	TRF	Tandem_Repeat	113132	113196	130	+	.	.
scaffold149	subtractBed	intrn	112798	113088	.	+	.	Parent=CGI_10025290;
	scaffold149	WUBlastX	LTR_Gypsy	112798	113088	25	+	.	.
scaffold149	subtractBed	intrn	113548	113617	.	+	.	Parent=CGI_10025290;
	scaffold149	TRF	Tandem_Repeat	113548	113617	95	+	.	.
scaffold149	subtractBed	intrn	113548	113617	.	+	.	Parent=CGI_10025290;
	scaffold149	TRF	Tandem_Repeat	113548	113617	95	+	.	.
scaffold149	subtractBed	intrn	128228	128471	.	-	.	Parent=CGI_10025291;
	scaffold149	TRF	Tandem_Repeat	128228	128471	364	+	.	.
scaffold149	subtractBed	intrn	131982	132021	.	-	.	Parent=CGI_10025291;
	scaffold149	TRF	Tandem_Repeat	131982	132021	80	+	.	.
scaffold149	subtractBed	intrn	133933	133976	.	-	.	Parent=CGI_10025291;
	scaffold149	TRF	Tandem_Repeat	133933	133976	63	+	.	.
scaffold149	subtractBed	intrn	161506	162042	.	+	.	Parent=CGI_10025293;
	scaffold149	TRF	Tandem_Repeat	161506	162042	300	+	.	.
scaffold149	subtractBed	intrn	161506	162042	.	+	.	Parent=CGI_10025293;
	scaffold149	TRF	Tandem_Repeat	161506	162042	435	+	.	.
scaffold149	subtractBed	intrn	185949	186090	.	-	.	Parent=CGI_10025295;
	scaffold149	TRF	Tandem_Repeat	185949	186090	230	+	.	.
scaffold149	subtractBed	intrn	191758	191988	.	-	.	Parent=CGI_10025295;
	scaffold149	WUBlastX	LINE_L1	191758	191988	21	+	.	.
scaffold149	subtractBed	intrn	192117	192629	.	-	.	Parent=CGI_10025295;
	scaffold149	WUBlastX	LINE_L1-Tx1	192117	192629	114	+	.	.
scaffold149	subtractBed	intrn	191490	191666	.	-	.	Parent=CGI_10025295;
	scaffold149	WUBlastX	LINE_L1-Tx1	191490	191666	34	+	.	.
scaffold149	subtractBed	intrn	192057	192422	.	-	.	Parent=CGI_10025295;
	scaffold149	WUBlastX	LINE_L1-Tx1	192057	192422	42	+	.	.
scaffold149	subtractBed	intrn	298526	298568	.	+	.	Parent=CGI_10025297;
	scaffold149	TRF	Tandem_Repeat	298526	298568	86	+	.	.
scaffold149	subtractBed	intrn	298588	298653	.	+	.	Parent=CGI_10025297;
	scaffold149	TRF	Tandem_Repeat	298588	298653	132	+	.	.
scaffold149	subtractBed	intrn	298526	298568	.	-	.	Parent=CGI_10025298;
	scaffold149	TRF	Tandem_Repeat	298526	298568	86	+	.	.
scaffold149	subtractBed	intrn	298588	298653	.	-	.	Parent=CGI_10025298;
	scaffold149	TRF	Tandem_Repeat	298588	298653	132	+	.	.
scaffold149	subtractBed	intrn	311285	311330	.	+	.	Parent=CGI_10025300;
	scaffold149	TRF	Tandem_Repeat	311285	311330	83	+	.	.
scaffold149	subtractBed	intrn	346251	346277	.	+	.	Parent=CGI_10025300;
	scaffold149	TRF	Tandem_Repeat	346251	346277	54	+	.	.
scaffold149	subtractBed	intrn	347825	348085	.	+	.	Parent=CGI_10025300;
	scaffold149	WUBlastX	LINE_L1-Tx1	347825	348085	57	-	.	.
scaffold149	subtractBed	intrn	348067	348189	.	+	.	Parent=CGI_10025300;
	scaffold149	WUBlastX	LINE_L1-Tx1	348067	348189	56	-	.	.
scaffold149	subtractBed	intrn	347409	347561	.	+	.	Parent=CGI_10025300;
	scaffold149	WUBlastX	LINE_L1-Tx1	347409	347561	24	-	.	.
scaffold149	subtractBed	intrn	352090	352131	.	+	.	Parent=CGI_10025300;
	scaffold149	TRF	Tandem_Repeat	352090	352131	57	+	.	.
scaffold149	subtractBed	intrn	420728	420796	.	-	.	Parent=CGI_10025302;
	scaffold149	TRF	Tandem_Repeat	420728	420796	138	+	.	.
scaffold149	subtractBed	intrn	488401	488425	.	-	.	Parent=CGI_10025303;
	scaffold149	TRF	Tandem_Repeat	488401	488425	50	+	.	.
scaffold149	subtractBed	intrn	497551	498174	.	-	.	Parent=CGI_10025304;
	scaffold149	TRF	Tandem_Repeat	497551	498174	489	+	.	.
scaffold149	subtractBed	intrn	497551	498174	.	-	.	Parent=CGI_10025304;
	scaffold149	TRF	Tandem_Repeat	497551	498174	561	+	.	.
scaffold149	subtractBed	intrn	497993	498185	.	-	.	Parent=CGI_10025304;
	scaffold149	TRF	Tandem_Repeat	497993	498185	255	+	.	.
scaffold149	subtractBed	intrn	497551	498174	.	-	.	Parent=CGI_10025304;
	scaffold149	TRF	Tandem_Repeat	497551	498174	519	+	.	.
scaffold149	subtractBed	intrn	502215	502271	.	-	.	Parent=CGI_10025304;
	scaffold149	TRF	Tandem_Repeat	502215	502271	105	+	.	.
scaffold149	subtractBed	intrn	555664	555731	.	-	.	Parent=CGI_10025307;
	scaffold149	TRF	Tandem_Repeat	555664	555731	109	+	.	.
scaffold149	subtractBed	intrn	556101	556223	.	-	.	Parent=CGI_10025307;
	scaffold149	TRF	Tandem_Repeat	556101	556223	173	+	.	.
scaffold149	subtractBed	intrn	587342	587393	.	+	.	Parent=CGI_10025308;
	scaffold149	TRF	Tandem_Repeat	587342	587393	104	+	.	.
scaffold149	subtractBed	intrn	588106	588155	.	+	.	Parent=CGI_10025308;
	scaffold149	TRF	Tandem_Repeat	588106	588155	100	+	.	.
scaffold149	subtractBed	intrn	589564	589653	.	+	.	Parent=CGI_10025308;
	scaffold149	WUBlastX	LTR_Ngaro	589564	589653	30	-	.	.
scaffold149	subtractBed	intrn	589647	589880	.	+	.	Parent=CGI_10025308;
	scaffold149	WUBlastX	LTR_Ngaro	589647	589880	27	-	.	.
scaffold149	subtractBed	intrn	601123	601157	.	-	.	Parent=CGI_10025311;
	scaffold149	TRF	Tandem_Repeat	601123	601157	70	+	.	.
scaffold149	subtractBed	intrn	622657	623472	.	-	.	Parent=CGI_10025312;
	scaffold149	WUBlastX	LINE_L1-Tx1	622657	623472	54	+	.	.
scaffold149	subtractBed	intrn	636747	636787	.	+	.	Parent=CGI_10025314;
	scaffold149	TRF	Tandem_Repeat	636747	636787	82	+	.	.
scaffold149	subtractBed	intrn	697031	697265	.	+	.	Parent=CGI_10025315;
	scaffold149	TRF	Tandem_Repeat	697031	697265	327	+	.	.
scaffold149	subtractBed	intrn	700105	700303	.	+	.	Parent=CGI_10025315;
	scaffold149	TRF	Tandem_Repeat	700091	700303	264	+	.	.
scaffold149	subtractBed	intrn	709350	709397	.	-	.	Parent=CGI_10025316;
	scaffold149	TRF	Tandem_Repeat	709350	709397	96	+	.	.
scaffold149	subtractBed	intrn	709920	710228	.	-	.	Parent=CGI_10025316;
	scaffold149	TRF	Tandem_Repeat	709920	710253	487	+	.	.
scaffold149	subtractBed	intrn	711059	711336	.	-	.	Parent=CGI_10025316;
	scaffold149	TRF	Tandem_Repeat	711059	711336	303	+	.	.
scaffold149	subtractBed	intrn	713104	713266	.	-	.	Parent=CGI_10025316;
	scaffold149	TRF	Tandem_Repeat	713104	713266	132	+	.	.
scaffold149	subtractBed	intrn	741807	741880	.	-	.	Parent=CGI_10025317;
	scaffold149	TRF	Tandem_Repeat	741807	741880	148	+	.	.
scaffold149	subtractBed	intrn	747392	747536	.	+	.	Parent=CGI_10025319;
	scaffold149	TRF	Tandem_Repeat	747392	747536	209	+	.	.
scaffold149	subtractBed	intrn	778133	778946	.	-	.	Parent=CGI_10025321;
	scaffold149	TRF	Tandem_Repeat	778133	778946	862	+	.	.
scaffold149	subtractBed	intrn	779128	779389	.	-	.	Parent=CGI_10025321;
	scaffold149	TRF	Tandem_Repeat	779128	779389	463	+	.	.
scaffold149	subtractBed	intrn	800244	800670	.	-	.	Parent=CGI_10025322;
	scaffold149	TRF	Tandem_Repeat	800244	800670	402	+	.	.
scaffold149	subtractBed	intrn	800305	800635	.	-	.	Parent=CGI_10025322;
	scaffold149	TRF	Tandem_Repeat	800305	800635	446	+	.	.
scaffold149	subtractBed	intrn	805539	805605	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	805539	805605	62	+	.	.
scaffold149	subtractBed	intrn	801780	804374	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	801780	804374	3468	+	.	.
scaffold149	subtractBed	intrn	806245	807739	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	806245	807739	1393	+	.	.
scaffold149	subtractBed	intrn	807664	807733	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	807664	807733	55	+	.	.
scaffold149	subtractBed	intrn	809734	809838	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	809734	809838	76	+	.	.
scaffold149	subtractBed	intrn	818429	818689	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	818429	818689	384	+	.	.
scaffold149	subtractBed	intrn	823847	824548	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	823847	824548	567	+	.	.
scaffold149	subtractBed	intrn	823884	824540	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	823884	824540	828	+	.	.
scaffold149	subtractBed	intrn	823884	824547	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	823884	824547	851	+	.	.
scaffold149	subtractBed	intrn	825189	825761	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	825189	825761	722	+	.	.
scaffold149	subtractBed	intrn	827131	828060	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	827131	828060	1518	+	.	.
scaffold149	subtractBed	intrn	827131	828975	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	827131	828975	2358	+	.	.
scaffold149	subtractBed	intrn	827131	828975	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	827131	828975	2358	+	.	.
scaffold149	subtractBed	intrn	827896	828922	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	827896	828922	1080	+	.	.
scaffold149	subtractBed	intrn	828130	828975	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	828130	828975	639	+	.	.
scaffold149	subtractBed	intrn	830496	830996	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	830496	830996	851	+	.	.
scaffold149	subtractBed	intrn	830496	830996	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	830496	830996	860	+	.	.
scaffold149	subtractBed	intrn	831463	831892	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	831463	831892	675	+	.	.
scaffold149	subtractBed	intrn	835798	836459	.	-	.	Parent=CGI_10025323;
	scaffold149	TRF	Tandem_Repeat	835798	836459	994	+	.	.
scaffold149	subtractBed	intrn	818429	818689	.	+	.	Parent=CGI_10025324;
	scaffold149	TRF	Tandem_Repeat	818429	818689	384	+	.	.
scaffold149	subtractBed	intrn	845719	845754	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	845719	845754	56	+	.	.
scaffold149	subtractBed	intrn	846637	847018	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	846637	847018	204	+	.	.
scaffold149	subtractBed	intrn	849202	849507	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	849202	849507	477	+	.	.
scaffold149	subtractBed	intrn	851255	851312	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	851255	851312	109	+	.	.
scaffold149	subtractBed	intrn	851341	851419	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	851341	851419	115	+	.	.
scaffold149	subtractBed	intrn	855497	855555	.	-	.	Parent=CGI_10025325;
	scaffold149	TRF	Tandem_Repeat	855497	855555	118	+	.	.
scaffold149	subtractBed	intrn	862547	862583	.	-	.	Parent=CGI_10025328;
	scaffold149	TRF	Tandem_Repeat	862547	862583	74	+	.	.
scaffold149	subtractBed	intrn	866766	867079	.	-	.	Parent=CGI_10025328;
	scaffold149	TRF	Tandem_Repeat	866766	867079	83	+	.	.
scaffold149	subtractBed	intrn	866750	867089	.	-	.	Parent=CGI_10025328;
	scaffold149	TRF	Tandem_Repeat	866750	867089	181	+	.	.
scaffold149	subtractBed	intrn	866750	867088	.	-	.	Parent=CGI_10025328;
	scaffold149	TRF	Tandem_Repeat	866750	867088	180	+	.	.
scaffold149	subtractBed	intrn	866921	867092	.	-	.	Parent=CGI_10025328;
	scaffold149	TRF	Tandem_Repeat	866921	867092	139	+	.	.
scaffold149	subtractBed	intrn	881751	882118	.	-	.	Parent=CGI_10025329;
	scaffold149	TRF	Tandem_Repeat	881751	882153	465	+	.	.
scaffold149	subtractBed	intrn	882387	882808	.	-	.	Parent=CGI_10025329;
	scaffold149	TRF	Tandem_Repeat	882387	882808	519	+	.	.
scaffold149	subtractBed	intrn	882987	883600	.	-	.	Parent=CGI_10025329;
	scaffold149	TRF	Tandem_Repeat	882987	883600	1012	+	.	.
scaffold149	subtractBed	intrn	899225	899357	.	+	.	Parent=CGI_10025330;
	scaffold149	TRF	Tandem_Repeat	899225	899357	184	+	.	.
scaffold149	subtractBed	intrn	901877	902070	.	+	.	Parent=CGI_10025330;
	scaffold149	TRF	Tandem_Repeat	901877	902070	280	+	.	.
scaffold149	subtractBed	intrn	902177	902204	.	+	.	Parent=CGI_10025330;
	scaffold149	TRF	Tandem_Repeat	902177	902204	56	+	.	.
scaffold149	subtractBed	intrn	912432	912466	.	-	.	Parent=CGI_10025331;
	scaffold149	TRF	Tandem_Repeat	912432	912466	70	+	.	.
scaffold149	subtractBed	intrn	914135	914313	.	-	.	Parent=CGI_10025331;
	scaffold149	TRF	Tandem_Repeat	914135	914313	313	+	.	.
scaffold149	subtractBed	intrn	915105	915236	.	-	.	Parent=CGI_10025331;
	scaffold149	TRF	Tandem_Repeat	915105	915236	192	+	.	.
scaffold149	subtractBed	intrn	915135	915235	.	-	.	Parent=CGI_10025331;
	scaffold149	TRF	Tandem_Repeat	915135	915235	121	+	.	.
scaffold149	subtractBed	intrn	919330	919449	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	919330	919449	91	+	.	.
scaffold149	subtractBed	intrn	919343	919495	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	919343	919495	152	+	.	.
scaffold149	subtractBed	intrn	919697	920121	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	919697	920121	294	+	.	.
scaffold149	subtractBed	intrn	919827	920049	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	919827	920049	58	+	.	.
scaffold149	subtractBed	intrn	919824	920177	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	919824	920177	195	+	.	.
scaffold149	subtractBed	intrn	924526	924575	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	924526	924575	84	+	.	.
scaffold149	subtractBed	intrn	926003	927316	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	926003	927316	1577	+	.	.
scaffold149	subtractBed	intrn	928303	928338	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	928303	928338	72	+	.	.
scaffold149	subtractBed	intrn	930055	930097	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	930055	930097	59	+	.	.
scaffold149	subtractBed	intrn	931180	931596	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	931180	931596	200	+	.	.
scaffold149	subtractBed	intrn	931180	931688	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	931180	931688	778	+	.	.
scaffold149	subtractBed	intrn	931675	931817	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	931675	931817	200	+	.	.
scaffold149	subtractBed	intrn	938135	938187	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	938135	938187	79	+	.	.
scaffold149	subtractBed	intrn	938169	938225	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	938169	938225	96	+	.	.
scaffold149	subtractBed	intrn	938135	938221	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	938135	938221	88	+	.	.
scaffold149	subtractBed	intrn	938141	938227	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	938141	938227	97	+	.	.
scaffold149	subtractBed	intrn	938513	938624	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	938513	938624	102	+	.	.
scaffold149	subtractBed	intrn	939539	939596	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	939539	939596	116	+	.	.
scaffold149	subtractBed	intrn	939790	939826	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	939790	939826	74	+	.	.
scaffold149	subtractBed	intrn	940656	942045	.	+	.	Parent=CGI_10025332;
	scaffold149	TRF	Tandem_Repeat	940626	942045	1364	+	.	.
scaffold149	subtractBed	intrn	958976	959122	.	-	.	Parent=CGI_10025333;
	scaffold149	WUBlastX	LINE_L1-Tx1	958976	959122	28	-	.	.
scaffold149	subtractBed	intrn	958887	959000	.	-	.	Parent=CGI_10025333;
	scaffold149	WUBlastX	LINE_L1-Tx1	958887	959000	36	-	.	.
scaffold149	subtractBed	intrn	978561	978590	.	+	.	Parent=CGI_10025334;
	scaffold149	TRF	Tandem_Repeat	978561	978590	51	+	.	.
scaffold149	subtractBed	intrn	977819	977905	.	+	.	Parent=CGI_10025334;
	scaffold149	WUBlastX	LINE_Penelope	977573	977905	39	+	.	.
scaffold149	subtractBed	intrn	999279	999298	.	-	.	Parent=CGI_10025337;
	scaffold149	WUBlastX	DNA_Harbinger	998912	999298	158	+	.	.
scaffold149	subtractBed	intrn	999745	1000016	.	-	.	Parent=CGI_10025337;
	scaffold149	TRF	Tandem_Repeat	999745	1000016	203	+	.	.
scaffold149	subtractBed	intrn	1000791	1001049	.	-	.	Parent=CGI_10025337;
	scaffold149	TRF	Tandem_Repeat	1000791	1001049	194	+	.	.
scaffold149	subtractBed	intrn	1001157	1001157	.	-	.	Parent=CGI_10025337;
	scaffold149	WUBlastX	DNA_Harbinger	1001157	1001276	97	+	.	.
scaffold149	subtractBed	intrn	1002046	1002180	.	-	.	Parent=CGI_10025337;
	scaffold149	WUBlastX	DNA_Harbinger	1002046	1002180	60	+	.	.
scaffold149	subtractBed	intrn	1002433	1002699	.	-	.	Parent=CGI_10025337;
	scaffold149	WUBlastX	DNA_Harbinger	1002433	1002699	128	+	.	.
scaffold149	subtractBed	intrn	1002246	1002368	.	-	.	Parent=CGI_10025337;
	scaffold149	WUBlastX	DNA_Harbinger	1002246	1002368	76	+	.	.
scaffold149	subtractBed	intrn	999279	999298	.	+	.	Parent=CGI_10025338;
	scaffold149	WUBlastX	DNA_Harbinger	998912	999298	158	+	.	.
scaffold149	subtractBed	intrn	999745	1000016	.	+	.	Parent=CGI_10025338;
	scaffold149	TRF	Tandem_Repeat	999745	1000016	203	+	.	.
scaffold149	subtractBed	intrn	1000791	1001049	.	+	.	Parent=CGI_10025338;
	scaffold149	TRF	Tandem_Repeat	1000791	1001049	194	+	.	.
scaffold149	subtractBed	intrn	1001157	1001157	.	+	.	Parent=CGI_10025338;
	scaffold149	WUBlastX	DNA_Harbinger	1001157	1001276	97	+	.	.
scaffold149	subtractBed	intrn	1035843	1035893	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1035843	1035893	57	+	.	.
scaffold149	subtractBed	intrn	1037253	1037450	.	-	.	Parent=CGI_10025339;
	scaffold149	WUBlastX	DNA_TcMar-Marin	1037253	1037450	48	-	.	.
scaffold149	subtractBed	intrn	1037802	1038020	.	-	.	Parent=CGI_10025339;
	scaffold149	WUBlastX	DNA_TcMar-Marin	1037802	1038020	42	-	.	.
scaffold149	subtractBed	intrn	1037202	1037396	.	-	.	Parent=CGI_10025339;
	scaffold149	WUBlastX	DNA_TcMar-Marin	1037202	1037396	25	-	.	.
scaffold149	subtractBed	intrn	1042362	1042453	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1042362	1042453	98	+	.	.
scaffold149	subtractBed	intrn	1042530	1042689	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1042530	1042689	196	+	.	.
scaffold149	subtractBed	intrn	1042919	1043012	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1042919	1043012	82	+	.	.
scaffold149	subtractBed	intrn	1049460	1049593	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1049460	1049593	83	+	.	.
scaffold149	subtractBed	intrn	1053988	1054035	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1053988	1054035	53	+	.	.
scaffold149	subtractBed	intrn	1053988	1054035	.	-	.	Parent=CGI_10025339;
	scaffold149	TRF	Tandem_Repeat	1053988	1054035	53	+	.	.
scaffold1490	subtractBed	intrn	8831	8878	.	+	.	Parent=CGI_10014903;
	scaffold1490	TRF	Tandem_Repeat	8831	8878	64	+	.	.
scaffold1490	subtractBed	intrn	10449	10496	.	+	.	Parent=CGI_10014903;
	scaffold1490	TRF	Tandem_Repeat	10449	10496	96	+	.	.
scaffold1490	subtractBed	intrn	12013	12134	.	+	.	Parent=CGI_10014903;
	scaffold1490	TRF	Tandem_Repeat	12013	12134	217	+	.	.
scaffold1490	subtractBed	intrn	99869	100676	.	+	.	Parent=CGI_10014909;
	scaffold1490	TRF	Tandem_Repeat	99869	100676	1062	+	.	.
scaffold1490	subtractBed	intrn	101852	101880	.	+	.	Parent=CGI_10014909;
	scaffold1490	TRF	Tandem_Repeat	101852	101880	58	+	.	.
scaffold1490	subtractBed	intrn	140641	140675	.	-	.	Parent=CGI_10014910;
	scaffold1490	TRF	Tandem_Repeat	140641	140675	61	+	.	.
scaffold1490	subtractBed	intrn	189129	189364	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	189129	189364	359	+	.	.
scaffold1490	subtractBed	intrn	190642	192307	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	190642	192307	2093	+	.	.
scaffold1490	subtractBed	intrn	195936	196421	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	195936	196421	632	+	.	.
scaffold1490	subtractBed	intrn	198938	200102	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	198938	200102	1358	+	.	.
scaffold1490	subtractBed	intrn	198938	200100	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	198938	200100	1372	+	.	.
scaffold1490	subtractBed	intrn	201456	201608	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	201456	201608	40	+	.	.
scaffold1490	subtractBed	intrn	201743	201994	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	201743	201994	37	+	.	.
scaffold1490	subtractBed	intrn	202186	202485	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	202186	202485	213	+	.	.
scaffold1490	subtractBed	intrn	202713	202949	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	202713	202949	117	+	.	.
scaffold1490	subtractBed	intrn	206021	206121	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	206021	206121	157	+	.	.
scaffold1490	subtractBed	intrn	206358	206466	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	206358	206466	148	+	.	.
scaffold1490	subtractBed	intrn	206842	207033	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	206842	207033	70	+	.	.
scaffold1490	subtractBed	intrn	207395	208099	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	207395	208099	88	+	.	.
scaffold1490	subtractBed	intrn	207392	207880	.	+	.	Parent=CGI_10014912;
	scaffold1490	WUBlastX	DNA_NOF	207392	207880	104	+	.	.
scaffold1490	subtractBed	intrn	213533	215018	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	213533	215018	2098	+	.	.
scaffold1490	subtractBed	intrn	213498	215018	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	213498	215018	1965	+	.	.
scaffold1490	subtractBed	intrn	217447	217768	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	217447	217768	608	+	.	.
scaffold1490	subtractBed	intrn	222367	222730	.	+	.	Parent=CGI_10014912;
	scaffold1490	TRF	Tandem_Repeat	222367	222730	422	+	.	.
scaffold1490	subtractBed	intrn	229561	229859	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	229561	229859	292	+	.	.
scaffold1490	subtractBed	intrn	229561	229863	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	229561	229863	298	+	.	.
scaffold1490	subtractBed	intrn	229925	230317	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	229925	230317	680	+	.	.
scaffold1490	subtractBed	intrn	229925	230807	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	229925	230807	687	+	.	.
scaffold1490	subtractBed	intrn	230317	230807	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	230317	230807	716	+	.	.
scaffold1490	subtractBed	intrn	230807	231367	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	230807	231367	713	+	.	.
scaffold1490	subtractBed	intrn	236735	238022	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	236735	238022	1672	+	.	.
scaffold1490	subtractBed	intrn	236735	238334	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	236735	238334	2080	+	.	.
scaffold1490	subtractBed	intrn	238028	238334	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	238028	238334	479	+	.	.
scaffold1490	subtractBed	intrn	239383	240234	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	239383	240234	1047	+	.	.
scaffold1490	subtractBed	intrn	245854	246304	.	+	.	Parent=CGI_10014914;
	scaffold1490	TRF	Tandem_Repeat	245854	246304	861	+	.	.
scaffold1490	subtractBed	intrn	275130	275504	.	+	.	Parent=CGI_10014916;
	scaffold1490	TRF	Tandem_Repeat	275128	275504	578	+	.	.
scaffold1490	subtractBed	intrn	277268	277506	.	+	.	Parent=CGI_10014916;
	scaffold1490	TRF	Tandem_Repeat	277268	277506	207	+	.	.
scaffold1490	subtractBed	intrn	277234	277506	.	+	.	Parent=CGI_10014916;
	scaffold1490	TRF	Tandem_Repeat	277234	277506	268	+	.	.
scaffold1490	subtractBed	intrn	284587	284979	.	-	.	Parent=CGI_10014917;
	scaffold1490	TRF	Tandem_Repeat	284587	284979	137	+	.	.
scaffold1490	subtractBed	intrn	284699	284956	.	-	.	Parent=CGI_10014917;
	scaffold1490	TRF	Tandem_Repeat	284699	284956	113	+	.	.
scaffold1490	subtractBed	intrn	302385	302564	.	+	.	Parent=CGI_10014918;
	scaffold1490	TRF	Tandem_Repeat	302385	302564	227	+	.	.
scaffold1490	subtractBed	intrn	314741	315353	.	+	.	Parent=CGI_10014918;
	scaffold1490	TRF	Tandem_Repeat	314741	315353	744	+	.	.
scaffold1490	subtractBed	intrn	331736	332000	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	331736	332000	442	+	.	.
scaffold1490	subtractBed	intrn	337622	337743	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337622	337743	140	+	.	.
scaffold1490	subtractBed	intrn	337622	338192	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337622	338192	167	+	.	.
scaffold1490	subtractBed	intrn	337804	338192	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337804	338192	256	+	.	.
scaffold1490	subtractBed	intrn	337637	338185	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337637	338185	270	+	.	.
scaffold1490	subtractBed	intrn	337622	338192	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337622	338192	290	+	.	.
scaffold1490	subtractBed	intrn	337802	338192	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	337802	338192	284	+	.	.
scaffold1490	subtractBed	intrn	353647	353768	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	353647	353768	115	+	.	.
scaffold1490	subtractBed	intrn	353827	354416	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	353827	354416	496	+	.	.
scaffold1490	subtractBed	intrn	353960	354407	.	+	.	Parent=CGI_10014920;
	scaffold1490	TRF	Tandem_Repeat	353960	354407	613	+	.	.
scaffold1490	subtractBed	intrn	378019	378049	.	+	.	Parent=CGI_10014923;
	scaffold1490	TRF	Tandem_Repeat	378019	378049	62	+	.	.
scaffold1490	subtractBed	intrn	384035	384073	.	+	.	Parent=CGI_10014923;
	scaffold1490	TRF	Tandem_Repeat	384035	384073	60	+	.	.
scaffold1490	subtractBed	intrn	392935	392963	.	+	.	Parent=CGI_10014923;
	scaffold1490	WUBlastX	LINE_L1	392935	393474	30	+	.	.
scaffold1491	subtractBed	intrn	13855	13909	.	-	.	Parent=CGI_10005609;
	scaffold1491	TRF	Tandem_Repeat	13855	13909	110	+	.	.
scaffold1491	subtractBed	intrn	14498	14537	.	-	.	Parent=CGI_10005609;
	scaffold1491	TRF	Tandem_Repeat	14498	14537	80	+	.	.
scaffold1491	subtractBed	intrn	58552	59542	.	-	.	Parent=CGI_10005614;
	scaffold1491	TRF	Tandem_Repeat	58552	59542	914	+	.	.
scaffold1491	subtractBed	intrn	100172	100259	.	-	.	Parent=CGI_10005615;
	scaffold1491	TRF	Tandem_Repeat	100172	100259	114	+	.	.
scaffold1492	subtractBed	intrn	10098	10177	.	-	.	Parent=CGI_10012067;
	scaffold1492	TRF	Tandem_Repeat	10098	10177	133	+	.	.
scaffold1492	subtractBed	intrn	10554	10612	.	-	.	Parent=CGI_10012067;
	scaffold1492	TRF	Tandem_Repeat	10554	10612	118	+	.	.
scaffold1492	subtractBed	intrn	10847	11132	.	-	.	Parent=CGI_10012067;
	scaffold1492	TRF	Tandem_Repeat	10847	11132	473	+	.	.
scaffold1492	subtractBed	intrn	11134	11159	.	-	.	Parent=CGI_10012067;
	scaffold1492	TRF	Tandem_Repeat	11134	11159	52	+	.	.
scaffold1492	subtractBed	intrn	15959	16001	.	-	.	Parent=CGI_10012067;
	scaffold1492	TRF	Tandem_Repeat	15959	16001	86	+	.	.
scaffold1492	subtractBed	intrn	16939	16993	.	+	.	Parent=CGI_10012068;
	scaffold1492	TRF	Tandem_Repeat	16939	16993	110	+	.	.
scaffold1492	subtractBed	intrn	106527	106577	.	+	.	Parent=CGI_10012074;
	scaffold1492	TRF	Tandem_Repeat	106527	106577	102	+	.	.
scaffold1492	subtractBed	intrn	109512	109613	.	+	.	Parent=CGI_10012075;
	scaffold1492	TRF	Tandem_Repeat	109512	109613	91	+	.	.
scaffold1492	subtractBed	intrn	109524	109690	.	+	.	Parent=CGI_10012075;
	scaffold1492	TRF	Tandem_Repeat	109524	109690	115	+	.	.
scaffold1492	subtractBed	intrn	111055	111087	.	+	.	Parent=CGI_10012075;
	scaffold1492	TRF	Tandem_Repeat	111055	111087	66	+	.	.
scaffold1492	subtractBed	intrn	119486	119515	.	+	.	Parent=CGI_10012075;
	scaffold1492	TRF	Tandem_Repeat	119486	119515	51	+	.	.
scaffold1492	subtractBed	intrn	152821	152867	.	-	.	Parent=CGI_10012077;
	scaffold1492	TRF	Tandem_Repeat	152821	152867	87	+	.	.
scaffold1492	subtractBed	intrn	158262	158307	.	-	.	Parent=CGI_10012077;
	scaffold1492	TRF	Tandem_Repeat	158262	158307	83	+	.	.
scaffold1492	subtractBed	intrn	176354	176402	.	+	.	Parent=CGI_10012081;
	scaffold1492	TRF	Tandem_Repeat	176354	176402	50	+	.	.
scaffold1492	subtractBed	intrn	182035	182108	.	+	.	Parent=CGI_10012081;
	scaffold1492	TRF	Tandem_Repeat	182035	182108	148	+	.	.
scaffold1492	subtractBed	intrn	184231	187454	.	+	.	Parent=CGI_10012081;
	scaffold1492	TRF	Tandem_Repeat	184231	187454	6448	+	.	.
scaffold1492	subtractBed	intrn	189375	189419	.	+	.	Parent=CGI_10012081;
	scaffold1492	TRF	Tandem_Repeat	189375	189419	72	+	.	.
scaffold1492	subtractBed	intrn	238649	238739	.	+	.	Parent=CGI_10012083;
	scaffold1492	TRF	Tandem_Repeat	238649	238739	101	+	.	.
scaffold1492	subtractBed	intrn	267666	267710	.	-	.	Parent=CGI_10012085;
	scaffold1492	TRF	Tandem_Repeat	267666	267710	90	+	.	.
scaffold1492	subtractBed	intrn	273030	273080	.	-	.	Parent=CGI_10012085;
	scaffold1492	TRF	Tandem_Repeat	273030	273080	102	+	.	.
scaffold1492	subtractBed	intrn	273078	273103	.	-	.	Parent=CGI_10012085;
	scaffold1492	TRF	Tandem_Repeat	273078	273103	52	+	.	.
scaffold1492	subtractBed	intrn	273359	273405	.	-	.	Parent=CGI_10012085;
	scaffold1492	TRF	Tandem_Repeat	273359	273405	76	+	.	.
scaffold1493	subtractBed	intrn	26752	28045	.	-	.	Parent=CGI_10006737;
	scaffold1493	TRF	Tandem_Repeat	26752	28045	1883	+	.	.
scaffold1493	subtractBed	intrn	28069	28126	.	-	.	Parent=CGI_10006737;
	scaffold1493	TRF	Tandem_Repeat	28069	28126	71	+	.	.
scaffold1493	subtractBed	intrn	28069	28130	.	-	.	Parent=CGI_10006737;
	scaffold1493	TRF	Tandem_Repeat	28069	28130	97	+	.	.
scaffold1493	subtractBed	intrn	28069	28134	.	-	.	Parent=CGI_10006737;
	scaffold1493	TRF	Tandem_Repeat	28069	28134	105	+	.	.
scaffold1493	subtractBed	intrn	28076	28135	.	-	.	Parent=CGI_10006737;
	scaffold1493	TRF	Tandem_Repeat	28076	28135	57	+	.	.
scaffold1493	subtractBed	intrn	40785	41086	.	+	.	Parent=CGI_10006738;
	scaffold1493	TRF	Tandem_Repeat	40762	41086	569	+	.	.
scaffold1493	subtractBed	intrn	93831	93877	.	+	.	Parent=CGI_10006742;
	scaffold1493	TRF	Tandem_Repeat	93831	93877	94	+	.	.
scaffold1493	subtractBed	intrn	92973	93449	.	+	.	Parent=CGI_10006742;
	scaffold1493	WUBlastX	DNA_Harbinger	92973	93449	153	+	.	.
scaffold1493	subtractBed	intrn	140798	140839	.	-	.	Parent=CGI_10006743;
	scaffold1493	TRF	Tandem_Repeat	140798	140839	84	+	.	.
scaffold1493	subtractBed	intrn	153581	153626	.	+	.	Parent=CGI_10006744;
	scaffold1493	TRF	Tandem_Repeat	153581	153626	85	+	.	.
scaffold1497	subtractBed	intrn	17476	17527	.	+	.	Parent=CGI_10006959;
	scaffold1497	TRF	Tandem_Repeat	17476	17527	104	+	.	.
scaffold1497	subtractBed	intrn	17642	17689	.	+	.	Parent=CGI_10006959;
	scaffold1497	TRF	Tandem_Repeat	17642	17689	96	+	.	.
scaffold1497	subtractBed	intrn	22418	22447	.	+	.	Parent=CGI_10006959;
	scaffold1497	TRF	Tandem_Repeat	22418	22447	51	+	.	.
scaffold1497	subtractBed	intrn	24907	25080	.	+	.	Parent=CGI_10006959;
	scaffold1497	WUBlastX	DNA_Kolobok	24907	25080	53	+	.	.
scaffold1497	subtractBed	intrn	24509	24751	.	+	.	Parent=CGI_10006959;
	scaffold1497	WUBlastX	DNA_Kolobok	24509	24751	68	+	.	.
scaffold1497	subtractBed	intrn	39727	40815	.	+	.	Parent=CGI_10006963;
	scaffold1497	WUBlastX	LINE_RTE-X	39727	40815	318	-	.	.
scaffold1497	subtractBed	intrn	40766	41113	.	+	.	Parent=CGI_10006963;
	scaffold1497	WUBlastX	LINE_RTE-X	40766	41113	204	-	.	.
scaffold1497	subtractBed	intrn	40967	41155	.	+	.	Parent=CGI_10006963;
	scaffold1497	WUBlastX	LINE_RTE-BovB	40967	41155	57	-	.	.
scaffold1497	subtractBed	intrn	110573	110614	.	-	.	Parent=CGI_10006965;
	scaffold1497	TRF	Tandem_Repeat	110573	110614	84	+	.	.
scaffold1497	subtractBed	intrn	134740	134784	.	+	.	Parent=CGI_10006966;
	scaffold1497	TRF	Tandem_Repeat	134740	134784	90	+	.	.
scaffold1497	subtractBed	intrn	136097	136140	.	+	.	Parent=CGI_10006966;
	scaffold1497	TRF	Tandem_Repeat	136097	136140	79	+	.	.
scaffold1497	subtractBed	intrn	134740	134784	.	-	.	Parent=CGI_10006967;
	scaffold1497	TRF	Tandem_Repeat	134740	134784	90	+	.	.
scaffold1497	subtractBed	intrn	136097	136140	.	-	.	Parent=CGI_10006967;
	scaffold1497	TRF	Tandem_Repeat	136097	136140	79	+	.	.
scaffold1497	subtractBed	intrn	155177	155757	.	-	.	Parent=CGI_10006968;
	scaffold1497	TRF	Tandem_Repeat	155177	155757	858	+	.	.
scaffold1498	subtractBed	intrn	1432	1462	.	+	.	Parent=CGI_10004755;
	scaffold1498	TRF	Tandem_Repeat	1432	1462	62	+	.	.
scaffold1498	subtractBed	intrn	2101	2577	.	+	.	Parent=CGI_10004755;
	scaffold1498	WUBlastX	LINE_L2	2101	2577	97	-	.	.
scaffold1498	subtractBed	intrn	36282	36325	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	36282	36325	88	+	.	.
scaffold1498	subtractBed	intrn	36947	36992	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	36947	36992	92	+	.	.
scaffold1498	subtractBed	intrn	37935	37974	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	37935	37974	80	+	.	.
scaffold1498	subtractBed	intrn	38415	38444	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	38415	38444	51	+	.	.
scaffold1498	subtractBed	intrn	43832	43857	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	43832	43857	52	+	.	.
scaffold1498	subtractBed	intrn	47599	47624	.	+	.	Parent=CGI_10004756;
	scaffold1498	TRF	Tandem_Repeat	47599	47624	52	+	.	.
scaffold1498	subtractBed	intrn	67979	68025	.	-	.	Parent=CGI_10004757;
	scaffold1498	TRF	Tandem_Repeat	67979	68025	85	+	.	.
scaffold1498	subtractBed	intrn	92200	92510	.	+	.	Parent=CGI_10004758;
	scaffold1498	TRF	Tandem_Repeat	92200	92510	223	+	.	.
scaffold1498	subtractBed	intrn	90180	91052	.	+	.	Parent=CGI_10004758;
	scaffold1498	WUBlastX	LINE_L2	90180	91052	450	-	.	.
scaffold1498	subtractBed	intrn	91010	91402	.	+	.	Parent=CGI_10004758;
	scaffold1498	WUBlastX	LINE_L2	91010	91402	169	-	.	.
scaffold1498	subtractBed	intrn	91387	91611	.	+	.	Parent=CGI_10004758;
	scaffold1498	WUBlastX	LINE_L2	91387	91611	139	-	.	.
scaffold1499	subtractBed	intrn	16179	16221	.	+	.	Parent=CGI_10001715;
	scaffold1499	TRF	Tandem_Repeat	16179	16221	50	+	.	.
scaffold150	subtractBed	intrn	153193	153634	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	153193	153634	649	+	.	.
scaffold150	subtractBed	intrn	153945	154171	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	153945	154171	310	+	.	.
scaffold150	subtractBed	intrn	157773	157809	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	157773	157809	74	+	.	.
scaffold150	subtractBed	intrn	157867	157891	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	157867	157891	50	+	.	.
scaffold150	subtractBed	intrn	160477	160513	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	160477	160513	74	+	.	.
scaffold150	subtractBed	intrn	160571	160595	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	160571	160595	50	+	.	.
scaffold150	subtractBed	intrn	183508	183553	.	+	.	Parent=CGI_10028589;
	scaffold150	TRF	Tandem_Repeat	183508	183553	76	+	.	.
scaffold150	subtractBed	intrn	204603	205397	.	-	.	Parent=CGI_10028590;
	scaffold150	WUBlastX	DNA_IS4EU	204603	205397	406	+	.	.
scaffold150	subtractBed	intrn	224267	224335	.	+	.	Parent=CGI_10028591;
	scaffold150	WUBlastX	DNA_hAT	224267	224578	59	+	.	.
scaffold150	subtractBed	intrn	225583	225642	.	+	.	Parent=CGI_10028591;
	scaffold150	TRF	Tandem_Repeat	225583	225642	93	+	.	.
scaffold150	subtractBed	intrn	225708	225774	.	+	.	Parent=CGI_10028591;
	scaffold150	TRF	Tandem_Repeat	225708	225774	55	+	.	.
scaffold150	subtractBed	intrn	225708	225754	.	+	.	Parent=CGI_10028591;
	scaffold150	TRF	Tandem_Repeat	225708	225754	60	+	.	.
scaffold150	subtractBed	intrn	231163	231856	.	+	.	Parent=CGI_10028591;
	scaffold150	TRF	Tandem_Repeat	231163	231856	1003	+	.	.
scaffold150	subtractBed	intrn	232019	232091	.	+	.	Parent=CGI_10028591;
	scaffold150	TRF	Tandem_Repeat	232019	232091	128	+	.	.
scaffold150	subtractBed	intrn	230932	231111	.	+	.	Parent=CGI_10028591;
	scaffold150	WUBlastX	LINE_RTE-X	230932	231111	103	+	.	.
scaffold150	subtractBed	intrn	237995	238162	.	+	.	Parent=CGI_10028591;
	scaffold150	WUBlastX	DNA_PiggyBac	237995	238162	50	+	.	.
scaffold150	subtractBed	intrn	225583	225642	.	-	.	Parent=CGI_10028592;
	scaffold150	TRF	Tandem_Repeat	225583	225642	93	+	.	.
scaffold150	subtractBed	intrn	225708	225774	.	-	.	Parent=CGI_10028592;
	scaffold150	TRF	Tandem_Repeat	225708	225774	55	+	.	.
scaffold150	subtractBed	intrn	225708	225754	.	-	.	Parent=CGI_10028592;
	scaffold150	TRF	Tandem_Repeat	225708	225754	60	+	.	.
scaffold150	subtractBed	intrn	231163	231856	.	-	.	Parent=CGI_10028592;
	scaffold150	TRF	Tandem_Repeat	231163	231856	1003	+	.	.
scaffold150	subtractBed	intrn	232019	232091	.	-	.	Parent=CGI_10028592;
	scaffold150	TRF	Tandem_Repeat	232019	232091	128	+	.	.
scaffold150	subtractBed	intrn	230932	231111	.	-	.	Parent=CGI_10028592;
	scaffold150	WUBlastX	LINE_RTE-X	230932	231111	103	+	.	.
scaffold150	subtractBed	intrn	425604	425660	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	425604	425660	51	+	.	.
scaffold150	subtractBed	intrn	425604	425662	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	425604	425662	55	+	.	.
scaffold150	subtractBed	intrn	432619	432655	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	432619	432655	65	+	.	.
scaffold150	subtractBed	intrn	433169	433230	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	433169	433230	60	+	.	.
scaffold150	subtractBed	intrn	433168	433254	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	433168	433254	77	+	.	.
scaffold150	subtractBed	intrn	433250	433340	.	-	.	Parent=CGI_10028608;
	scaffold150	TRF	Tandem_Repeat	433250	433340	82	+	.	.
scaffold150	subtractBed	intrn	518826	518877	.	-	.	Parent=CGI_10028611;
	scaffold150	TRF	Tandem_Repeat	518826	518877	104	+	.	.
scaffold150	subtractBed	intrn	602901	603270	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	602901	603270	486	+	.	.
scaffold150	subtractBed	intrn	610580	611607	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	610580	611607	408	+	.	.
scaffold150	subtractBed	intrn	610580	611607	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	610580	611607	452	+	.	.
scaffold150	subtractBed	intrn	611828	612041	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	611828	612041	261	+	.	.
scaffold150	subtractBed	intrn	623741	624399	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	623741	624399	933	+	.	.
scaffold150	subtractBed	intrn	626492	626529	.	+	.	Parent=CGI_10028616;
	scaffold150	TRF	Tandem_Repeat	626492	626529	58	+	.	.
scaffold150	subtractBed	intrn	692034	692064	.	-	.	Parent=CGI_10028621;
	scaffold150	TRF	Tandem_Repeat	692034	692064	62	+	.	.
scaffold150	subtractBed	intrn	739568	739678	.	+	.	Parent=CGI_10028623;
	scaffold150	TRF	Tandem_Repeat	739568	739678	54	+	.	.
scaffold150	subtractBed	intrn	739575	739673	.	+	.	Parent=CGI_10028623;
	scaffold150	TRF	Tandem_Repeat	739575	739673	78	+	.	.
scaffold150	subtractBed	intrn	748110	748249	.	+	.	Parent=CGI_10028623;
	scaffold150	TRF	Tandem_Repeat	748110	748249	271	+	.	.
scaffold150	subtractBed	intrn	754611	754827	.	+	.	Parent=CGI_10028623;
	scaffold150	WUBlastX	RC_Helitron	754504	754827	50	+	.	.
scaffold150	subtractBed	intrn	760619	761702	.	+	.	Parent=CGI_10028624;
	scaffold150	TRF	Tandem_Repeat	760619	761702	1482	+	.	.
scaffold150	subtractBed	intrn	762931	762976	.	+	.	Parent=CGI_10028624;
	scaffold150	TRF	Tandem_Repeat	762931	762976	57	+	.	.
scaffold150	subtractBed	intrn	762934	762975	.	+	.	Parent=CGI_10028624;
	scaffold150	TRF	Tandem_Repeat	762934	762975	50	+	.	.
scaffold150	subtractBed	intrn	767281	767328	.	+	.	Parent=CGI_10028624;
	scaffold150	TRF	Tandem_Repeat	767281	767328	60	+	.	.
scaffold150	subtractBed	intrn	767284	767328	.	+	.	Parent=CGI_10028624;
	scaffold150	TRF	Tandem_Repeat	767284	767328	81	+	.	.
scaffold150	subtractBed	intrn	765949	765993	.	+	.	Parent=CGI_10028624;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	765640	765993	64	+	.	.
scaffold150	subtractBed	intrn	760619	761702	.	-	.	Parent=CGI_10028625;
	scaffold150	TRF	Tandem_Repeat	760619	761702	1482	+	.	.
scaffold150	subtractBed	intrn	762931	762976	.	-	.	Parent=CGI_10028625;
	scaffold150	TRF	Tandem_Repeat	762931	762976	57	+	.	.
scaffold150	subtractBed	intrn	762934	762975	.	-	.	Parent=CGI_10028625;
	scaffold150	TRF	Tandem_Repeat	762934	762975	50	+	.	.
scaffold150	subtractBed	intrn	767281	767328	.	-	.	Parent=CGI_10028625;
	scaffold150	TRF	Tandem_Repeat	767281	767328	60	+	.	.
scaffold150	subtractBed	intrn	767284	767328	.	-	.	Parent=CGI_10028625;
	scaffold150	TRF	Tandem_Repeat	767284	767328	81	+	.	.
scaffold150	subtractBed	intrn	765949	765993	.	-	.	Parent=CGI_10028625;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	765640	765993	64	+	.	.
scaffold150	subtractBed	intrn	843272	843306	.	-	.	Parent=CGI_10028627;
	scaffold150	TRF	Tandem_Repeat	843272	843306	61	+	.	.
scaffold150	subtractBed	intrn	856688	856727	.	+	.	Parent=CGI_10028629;
	scaffold150	TRF	Tandem_Repeat	856688	856727	73	+	.	.
scaffold150	subtractBed	intrn	907605	907641	.	+	.	Parent=CGI_10028630;
	scaffold150	TRF	Tandem_Repeat	907605	907641	65	+	.	.
scaffold150	subtractBed	intrn	907605	907644	.	+	.	Parent=CGI_10028630;
	scaffold150	TRF	Tandem_Repeat	907605	907644	53	+	.	.
scaffold150	subtractBed	intrn	911668	911712	.	+	.	Parent=CGI_10028630;
	scaffold150	TRF	Tandem_Repeat	911668	911712	63	+	.	.
scaffold150	subtractBed	intrn	1055963	1056251	.	+	.	Parent=CGI_10028647;
	scaffold150	TRF	Tandem_Repeat	1055934	1056251	609	+	.	.
scaffold150	subtractBed	intrn	1116238	1116557	.	-	.	Parent=CGI_10028652;
	scaffold150	TRF	Tandem_Repeat	1116238	1116572	233	+	.	.
scaffold150	subtractBed	intrn	1148388	1148466	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1148388	1148466	74	+	.	.
scaffold150	subtractBed	intrn	1146580	1147322	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1146580	1147322	1014	+	.	.
scaffold150	subtractBed	intrn	1150871	1150908	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1150871	1150908	67	+	.	.
scaffold150	subtractBed	intrn	1152061	1152259	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1152061	1152259	346	+	.	.
scaffold150	subtractBed	intrn	1155212	1155610	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1155212	1155610	690	+	.	.
scaffold150	subtractBed	intrn	1163059	1163105	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1163059	1163105	60	+	.	.
scaffold150	subtractBed	intrn	1163278	1164824	.	+	.	Parent=CGI_10028654;
	scaffold150	TRF	Tandem_Repeat	1163278	1164824	2150	+	.	.
scaffold150	subtractBed	intrn	1176090	1176146	.	-	.	Parent=CGI_10028656;
	scaffold150	TRF	Tandem_Repeat	1176090	1176146	69	+	.	.
scaffold150	subtractBed	intrn	1181291	1181589	.	-	.	Parent=CGI_10028657;
	scaffold150	TRF	Tandem_Repeat	1181291	1181589	314	+	.	.
scaffold150	subtractBed	intrn	1186550	1186597	.	-	.	Parent=CGI_10028657;
	scaffold150	TRF	Tandem_Repeat	1186550	1186597	96	+	.	.
scaffold150	subtractBed	intrn	1186597	1186637	.	-	.	Parent=CGI_10028657;
	scaffold150	TRF	Tandem_Repeat	1186597	1186637	73	+	.	.
scaffold150	subtractBed	intrn	1186830	1186856	.	-	.	Parent=CGI_10028657;
	scaffold150	TRF	Tandem_Repeat	1186830	1186856	54	+	.	.
scaffold150	subtractBed	intrn	1196906	1197065	.	+	.	Parent=CGI_10028658;
	scaffold150	TRF	Tandem_Repeat	1196878	1197065	159	+	.	.
scaffold150	subtractBed	intrn	1199262	1200296	.	-	.	Parent=CGI_10028659;
	scaffold150	TRF	Tandem_Repeat	1199242	1200296	778	+	.	.
scaffold150	subtractBed	intrn	1199262	1200296	.	-	.	Parent=CGI_10028659;
	scaffold150	TRF	Tandem_Repeat	1199242	1200296	959	+	.	.
scaffold150	subtractBed	intrn	1199262	1200222	.	-	.	Parent=CGI_10028659;
	scaffold150	TRF	Tandem_Repeat	1199242	1200222	1017	+	.	.
scaffold150	subtractBed	intrn	1214103	1214527	.	-	.	Parent=CGI_10028661;
	scaffold150	TRF	Tandem_Repeat	1214103	1214527	207	+	.	.
scaffold150	subtractBed	intrn	1214192	1214564	.	-	.	Parent=CGI_10028661;
	scaffold150	TRF	Tandem_Repeat	1214192	1214564	568	+	.	.
scaffold150	subtractBed	intrn	1214192	1214564	.	-	.	Parent=CGI_10028661;
	scaffold150	TRF	Tandem_Repeat	1214192	1214564	453	+	.	.
scaffold150	subtractBed	intrn	1215265	1215419	.	-	.	Parent=CGI_10028661;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1215030	1215419	30	+	.	.
scaffold150	subtractBed	intrn	1215265	1215266	.	-	.	Parent=CGI_10028661;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1214982	1215266	30	+	.	.
scaffold150	subtractBed	intrn	1216149	1216155	.	-	.	Parent=CGI_10028661;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1216149	1216373	25	+	.	.
scaffold150	subtractBed	intrn	1215989	1215996	.	-	.	Parent=CGI_10028661;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1215922	1215996	42	+	.	.
scaffold150	subtractBed	intrn	1216365	1216373	.	-	.	Parent=CGI_10028661;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1216149	1216373	25	+	.	.
scaffold150	subtractBed	intrn	1222443	1223386	.	-	.	Parent=CGI_10028661;
	scaffold150	TRF	Tandem_Repeat	1222443	1223386	1006	+	.	.
scaffold150	subtractBed	intrn	1222485	1223386	.	-	.	Parent=CGI_10028661;
	scaffold150	TRF	Tandem_Repeat	1222485	1223386	1257	+	.	.
scaffold150	subtractBed	intrn	1214103	1214527	.	+	.	Parent=CGI_10028662;
	scaffold150	TRF	Tandem_Repeat	1214103	1214527	207	+	.	.
scaffold150	subtractBed	intrn	1214192	1214564	.	+	.	Parent=CGI_10028662;
	scaffold150	TRF	Tandem_Repeat	1214192	1214564	568	+	.	.
scaffold150	subtractBed	intrn	1214192	1214564	.	+	.	Parent=CGI_10028662;
	scaffold150	TRF	Tandem_Repeat	1214192	1214564	453	+	.	.
scaffold150	subtractBed	intrn	1215265	1215419	.	+	.	Parent=CGI_10028662;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1215030	1215419	30	+	.	.
scaffold150	subtractBed	intrn	1215265	1215266	.	+	.	Parent=CGI_10028662;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1214982	1215266	30	+	.	.
scaffold150	subtractBed	intrn	1216149	1216155	.	+	.	Parent=CGI_10028662;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1216149	1216373	25	+	.	.
scaffold150	subtractBed	intrn	1215989	1215996	.	+	.	Parent=CGI_10028662;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1215922	1215996	42	+	.	.
scaffold150	subtractBed	intrn	1216365	1216373	.	+	.	Parent=CGI_10028662;
	scaffold150	WUBlastX	DNA_Kolobok-Hyd	1216149	1216373	25	+	.	.
scaffold150	subtractBed	intrn	1230426	1230473	.	-	.	Parent=CGI_10028663;
	scaffold150	TRF	Tandem_Repeat	1230426	1230473	55	+	.	.
scaffold150	subtractBed	intrn	1304170	1304595	.	-	.	Parent=CGI_10028672;
	scaffold150	TRF	Tandem_Repeat	1304170	1304595	342	+	.	.
scaffold150	subtractBed	intrn	1304168	1304595	.	-	.	Parent=CGI_10028672;
	scaffold150	TRF	Tandem_Repeat	1304168	1304595	423	+	.	.
scaffold150	subtractBed	intrn	1305568	1306391	.	-	.	Parent=CGI_10028672;
	scaffold150	TRF	Tandem_Repeat	1305568	1306391	1199	+	.	.
scaffold150	subtractBed	intrn	1307475	1307545	.	-	.	Parent=CGI_10028672;
	scaffold150	TRF	Tandem_Repeat	1307475	1307545	142	+	.	.
scaffold150	subtractBed	intrn	1320726	1320763	.	-	.	Parent=CGI_10028674;
	scaffold150	TRF	Tandem_Repeat	1320726	1320763	67	+	.	.
scaffold150	subtractBed	intrn	1320893	1321008	.	-	.	Parent=CGI_10028674;
	scaffold150	TRF	Tandem_Repeat	1320893	1321008	187	+	.	.
scaffold150	subtractBed	intrn	1323592	1323644	.	-	.	Parent=CGI_10028674;
	scaffold150	TRF	Tandem_Repeat	1323592	1323644	97	+	.	.
scaffold150	subtractBed	intrn	1329182	1329218	.	-	.	Parent=CGI_10028674;
	scaffold150	TRF	Tandem_Repeat	1329182	1329218	74	+	.	.
scaffold150	subtractBed	intrn	1348719	1349542	.	+	.	Parent=CGI_10028675;
	scaffold150	TRF	Tandem_Repeat	1348701	1349542	1066	+	.	.
scaffold150	subtractBed	intrn	1353824	1354636	.	-	.	Parent=CGI_10028676;
	scaffold150	WUBlastX	LTR_DIRS	1353824	1354636	369	-	.	.
scaffold150	subtractBed	intrn	1354612	1355247	.	-	.	Parent=CGI_10028676;
	scaffold150	WUBlastX	LTR_DIRS	1354612	1355247	275	-	.	.
scaffold150	subtractBed	intrn	1354630	1355463	.	-	.	Parent=CGI_10028676;
	scaffold150	WUBlastX	LTR_DIRS	1354630	1355463	129	-	.	.
scaffold150	subtractBed	intrn	1352745	1353680	.	-	.	Parent=CGI_10028676;
	scaffold150	WUBlastX	LTR_DIRS	1352745	1353680	458	-	.	.
scaffold150	subtractBed	intrn	1365310	1365453	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1365310	1365453	126	+	.	.
scaffold150	subtractBed	intrn	1366517	1366576	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1366517	1366576	93	+	.	.
scaffold150	subtractBed	intrn	1368098	1368160	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1368098	1368160	58	+	.	.
scaffold150	subtractBed	intrn	1371921	1371976	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1371921	1371976	112	+	.	.
scaffold150	subtractBed	intrn	1377910	1378197	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1377910	1378197	324	+	.	.
scaffold150	subtractBed	intrn	1377910	1378197	.	+	.	Parent=CGI_10028677;
	scaffold150	TRF	Tandem_Repeat	1377910	1378197	366	+	.	.
scaffold150	subtractBed	intrn	1396588	1396710	.	-	.	Parent=CGI_10028679;
	scaffold150	TRF	Tandem_Repeat	1396588	1396710	129	+	.	.
scaffold150	subtractBed	intrn	1401868	1401961	.	-	.	Parent=CGI_10028679;
	scaffold150	TRF	Tandem_Repeat	1401868	1401961	134	+	.	.
scaffold150	subtractBed	intrn	1405476	1405519	.	-	.	Parent=CGI_10028679;
	scaffold150	TRF	Tandem_Repeat	1405476	1405519	88	+	.	.
scaffold150	subtractBed	intrn	1406108	1406144	.	-	.	Parent=CGI_10028679;
	scaffold150	TRF	Tandem_Repeat	1406108	1406144	65	+	.	.
scaffold150	subtractBed	intrn	1405476	1405519	.	+	.	Parent=CGI_10028680;
	scaffold150	TRF	Tandem_Repeat	1405476	1405519	88	+	.	.
scaffold150	subtractBed	intrn	1406108	1406144	.	+	.	Parent=CGI_10028680;
	scaffold150	TRF	Tandem_Repeat	1406108	1406144	65	+	.	.
scaffold150	subtractBed	intrn	1439277	1439319	.	+	.	Parent=CGI_10028683;
	scaffold150	TRF	Tandem_Repeat	1439277	1439319	59	+	.	.
scaffold150	subtractBed	intrn	1439489	1440366	.	+	.	Parent=CGI_10028683;
	scaffold150	TRF	Tandem_Repeat	1439489	1440366	1307	+	.	.
scaffold150	subtractBed	intrn	1441553	1441985	.	+	.	Parent=CGI_10028683;
	scaffold150	TRF	Tandem_Repeat	1441553	1441985	577	+	.	.
scaffold150	subtractBed	intrn	1450742	1450838	.	-	.	Parent=CGI_10028684;
	scaffold150	TRF	Tandem_Repeat	1450742	1450838	103	+	.	.
scaffold150	subtractBed	intrn	1450766	1450841	.	-	.	Parent=CGI_10028684;
	scaffold150	TRF	Tandem_Repeat	1450766	1450841	79	+	.	.
scaffold150	subtractBed	intrn	1581973	1582093	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1581973	1582093	224	+	.	.
scaffold150	subtractBed	intrn	1582194	1582263	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1582194	1582263	140	+	.	.
scaffold150	subtractBed	intrn	1585576	1585634	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1585576	1585634	118	+	.	.
scaffold150	subtractBed	intrn	1580672	1580986	.	+	.	Parent=CGI_10028690;
	scaffold150	WUBlastX	DNA_Kolobok	1580672	1580986	121	+	.	.
scaffold150	subtractBed	intrn	1581593	1581652	.	+	.	Parent=CGI_10028690;
	scaffold150	WUBlastX	DNA_Kolobok	1581593	1581652	34	+	.	.
scaffold150	subtractBed	intrn	1580669	1581040	.	+	.	Parent=CGI_10028690;
	scaffold150	WUBlastX	DNA_Kolobok	1580669	1581040	111	+	.	.
scaffold150	subtractBed	intrn	1581581	1581649	.	+	.	Parent=CGI_10028690;
	scaffold150	WUBlastX	DNA_Kolobok	1581581	1581649	25	+	.	.
scaffold150	subtractBed	intrn	1581197	1581439	.	+	.	Parent=CGI_10028690;
	scaffold150	WUBlastX	DNA_Kolobok	1581197	1581439	118	+	.	.
scaffold150	subtractBed	intrn	1587567	1587798	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1587563	1587798	357	+	.	.
scaffold150	subtractBed	intrn	1587885	1588194	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1587885	1588194	230	+	.	.
scaffold150	subtractBed	intrn	1589604	1589657	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1589604	1589657	99	+	.	.
scaffold150	subtractBed	intrn	1589734	1589771	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1589734	1589771	67	+	.	.
scaffold150	subtractBed	intrn	1589769	1589803	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1589769	1589803	70	+	.	.
scaffold150	subtractBed	intrn	1589842	1589922	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1589842	1589922	71	+	.	.
scaffold150	subtractBed	intrn	1590576	1592947	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1590576	1592947	3358	+	.	.
scaffold150	subtractBed	intrn	1594630	1594736	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1594630	1594736	171	+	.	.
scaffold150	subtractBed	intrn	1595444	1595526	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1595444	1595526	109	+	.	.
scaffold150	subtractBed	intrn	1595945	1595992	.	+	.	Parent=CGI_10028690;
	scaffold150	TRF	Tandem_Repeat	1595945	1595992	60	+	.	.
scaffold150	subtractBed	intrn	1610649	1611221	.	+	.	Parent=CGI_10028691;
	scaffold150	WUBlastX	LINE_CR1-L2	1610649	1611221	110	+	.	.
scaffold150	subtractBed	intrn	1610649	1611575	.	+	.	Parent=CGI_10028691;
	scaffold150	WUBlastX	LINE_CR1-L2	1610649	1611575	48	+	.	.
scaffold150	subtractBed	intrn	1610570	1610653	.	+	.	Parent=CGI_10028691;
	scaffold150	WUBlastX	LINE_CR1-L2	1610570	1610653	64	+	.	.
scaffold150	subtractBed	intrn	1610589	1610957	.	+	.	Parent=CGI_10028691;
	scaffold150	WUBlastX	LINE_CR1-L2	1610589	1610957	87	+	.	.
scaffold150	subtractBed	intrn	1610519	1610620	.	+	.	Parent=CGI_10028691;
	scaffold150	WUBlastX	LINE_L2	1610519	1610620	32	+	.	.
scaffold150	subtractBed	intrn	1760005	1760328	.	+	.	Parent=CGI_10028702;
	scaffold150	WUBlastX	DNA_IS4EU	1760005	1760328	84	-	.	.
scaffold150	subtractBed	intrn	1792868	1792910	.	-	.	Parent=CGI_10028703;
	scaffold150	TRF	Tandem_Repeat	1792868	1792910	86	+	.	.
scaffold150	subtractBed	intrn	1822441	1822494	.	-	.	Parent=CGI_10028704;
	scaffold150	TRF	Tandem_Repeat	1822441	1822494	99	+	.	.
scaffold150	subtractBed	intrn	1823184	1823226	.	-	.	Parent=CGI_10028704;
	scaffold150	TRF	Tandem_Repeat	1823184	1823226	86	+	.	.
scaffold150	subtractBed	intrn	1831789	1831843	.	-	.	Parent=CGI_10028707;
	scaffold150	TRF	Tandem_Repeat	1831789	1831843	56	+	.	.
scaffold1500	subtractBed	intrn	120102	120159	.	+	.	Parent=CGI_10007897;
	scaffold1500	TRF	Tandem_Repeat	120102	120159	107	+	.	.
scaffold1500	subtractBed	intrn	131253	131303	.	+	.	Parent=CGI_10007897;
	scaffold1500	TRF	Tandem_Repeat	131253	131303	72	+	.	.
scaffold1500	subtractBed	intrn	177829	177864	.	-	.	Parent=CGI_10007900;
	scaffold1500	TRF	Tandem_Repeat	177829	177864	72	+	.	.
scaffold1500	subtractBed	intrn	187786	187825	.	-	.	Parent=CGI_10007900;
	scaffold1500	TRF	Tandem_Repeat	187786	187825	80	+	.	.
scaffold1500	subtractBed	intrn	185375	185680	.	-	.	Parent=CGI_10007900;
	scaffold1500	WUBlastX	LTR_Gypsy	185375	185680	156	-	.	.
scaffold1500	subtractBed	intrn	185661	186290	.	-	.	Parent=CGI_10007900;
	scaffold1500	WUBlastX	LTR_Gypsy	185661	186290	506	-	.	.
scaffold1500	subtractBed	intrn	185276	185683	.	-	.	Parent=CGI_10007900;
	scaffold1500	WUBlastX	LTR_Gypsy	185276	185683	147	-	.	.
scaffold1500	subtractBed	intrn	185685	186218	.	-	.	Parent=CGI_10007900;
	scaffold1500	WUBlastX	LTR_Gypsy	185685	186218	509	-	.	.
scaffold1501	subtractBed	intrn	24865	24892	.	+	.	Parent=CGI_10004162;
	scaffold1501	TRF	Tandem_Repeat	24865	24892	56	+	.	.
scaffold1501	subtractBed	intrn	27311	27374	.	+	.	Parent=CGI_10004162;
	scaffold1501	TRF	Tandem_Repeat	27311	27374	128	+	.	.
scaffold1501	subtractBed	intrn	57112	57303	.	-	.	Parent=CGI_10004167;
	scaffold1501	TRF	Tandem_Repeat	57112	57303	196	+	.	.
scaffold1501	subtractBed	intrn	76086	76240	.	+	.	Parent=CGI_10004168;
	scaffold1501	TRF	Tandem_Repeat	76086	76240	204	+	.	.
scaffold1501	subtractBed	intrn	79083	79836	.	+	.	Parent=CGI_10004168;
	scaffold1501	TRF	Tandem_Repeat	79083	79836	693	+	.	.
scaffold1501	subtractBed	intrn	91282	91339	.	+	.	Parent=CGI_10004168;
	scaffold1501	TRF	Tandem_Repeat	91282	91339	116	+	.	.
scaffold1503	subtractBed	intrn	506	557	.	-	.	Parent=CGI_10009522;
	scaffold1503	TRF	Tandem_Repeat	506	557	104	+	.	.
scaffold1503	subtractBed	intrn	1839	2123	.	-	.	Parent=CGI_10009522;
	scaffold1503	TRF	Tandem_Repeat	1839	2123	552	+	.	.
scaffold1503	subtractBed	intrn	16278	17435	.	-	.	Parent=CGI_10009524;
	scaffold1503	TRF	Tandem_Repeat	16278	17435	1753	+	.	.
scaffold1503	subtractBed	intrn	16278	17435	.	-	.	Parent=CGI_10009524;
	scaffold1503	TRF	Tandem_Repeat	16278	17435	1798	+	.	.
scaffold1503	subtractBed	intrn	16281	17439	.	-	.	Parent=CGI_10009524;
	scaffold1503	TRF	Tandem_Repeat	16281	17439	1828	+	.	.
scaffold1503	subtractBed	intrn	21921	21957	.	-	.	Parent=CGI_10009524;
	scaffold1503	TRF	Tandem_Repeat	21921	21957	74	+	.	.
scaffold1503	subtractBed	intrn	41926	42115	.	+	.	Parent=CGI_10009525;
	scaffold1503	TRF	Tandem_Repeat	41926	42115	301	+	.	.
scaffold1503	subtractBed	intrn	42436	42518	.	+	.	Parent=CGI_10009525;
	scaffold1503	TRF	Tandem_Repeat	42436	42518	78	+	.	.
scaffold1503	subtractBed	intrn	57003	57263	.	+	.	Parent=CGI_10009528;
	scaffold1503	WUBlastX	DNA_TcMar-Tc1	57003	57263	164	-	.	.
scaffold1503	subtractBed	intrn	57620	57901	.	+	.	Parent=CGI_10009528;
	scaffold1503	WUBlastX	DNA_TcMar-Tc1	57620	57901	26	-	.	.
scaffold1503	subtractBed	intrn	57006	57347	.	+	.	Parent=CGI_10009528;
	scaffold1503	WUBlastX	DNA_TcMar-Tc1	57006	57347	148	-	.	.
scaffold1503	subtractBed	intrn	56379	56981	.	+	.	Parent=CGI_10009528;
	scaffold1503	WUBlastX	DNA_TcMar-Tc1	56379	56981	303	-	.	.
scaffold1503	subtractBed	intrn	67183	67438	.	+	.	Parent=CGI_10009528;
	scaffold1503	TRF	Tandem_Repeat	67183	67438	187	+	.	.
scaffold1503	subtractBed	intrn	67183	67509	.	+	.	Parent=CGI_10009528;
	scaffold1503	TRF	Tandem_Repeat	67183	67509	276	+	.	.
scaffold1503	subtractBed	intrn	67183	67500	.	+	.	Parent=CGI_10009528;
	scaffold1503	TRF	Tandem_Repeat	67183	67500	176	+	.	.
scaffold1503	subtractBed	intrn	64362	66286	.	+	.	Parent=CGI_10009528;
	scaffold1503	TRF	Tandem_Repeat	64362	66286	1356	+	.	.
scaffold1503	subtractBed	intrn	80765	80790	.	-	.	Parent=CGI_10009530;
	scaffold1503	TRF	Tandem_Repeat	80765	80790	52	+	.	.
scaffold1503	subtractBed	intrn	86801	86831	.	-	.	Parent=CGI_10009530;
	scaffold1503	TRF	Tandem_Repeat	86801	86831	62	+	.	.
scaffold1503	subtractBed	intrn	99829	99883	.	+	.	Parent=CGI_10009531;
	scaffold1503	TRF	Tandem_Repeat	99829	99883	103	+	.	.
scaffold1503	subtractBed	intrn	119558	119968	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	119545	119968	322	+	.	.
scaffold1503	subtractBed	intrn	121629	122475	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	121629	122475	1271	+	.	.
scaffold1503	subtractBed	intrn	133691	133766	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	133691	133766	109	+	.	.
scaffold1503	subtractBed	intrn	138576	138605	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	138576	138605	60	+	.	.
scaffold1503	subtractBed	intrn	139997	140200	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	139997	140200	160	+	.	.
scaffold1503	subtractBed	intrn	147224	147264	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	147224	147264	73	+	.	.
scaffold1503	subtractBed	intrn	149677	149711	.	+	.	Parent=CGI_10009534;
	scaffold1503	TRF	Tandem_Repeat	149677	149711	70	+	.	.
scaffold1503	subtractBed	intrn	195669	196278	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	195669	196278	253	+	.	.
scaffold1503	subtractBed	intrn	195816	196151	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	195816	196151	536	+	.	.
scaffold1503	subtractBed	intrn	195817	196151	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	195817	196151	521	+	.	.
scaffold1503	subtractBed	intrn	196106	196251	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	196106	196251	97	+	.	.
scaffold1503	subtractBed	intrn	195932	196278	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	195932	196278	341	+	.	.
scaffold1503	subtractBed	intrn	195764	196271	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	195764	196271	131	+	.	.
scaffold1503	subtractBed	intrn	196744	196783	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	196744	196783	64	+	.	.
scaffold1503	subtractBed	intrn	199806	199919	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	199806	199919	210	+	.	.
scaffold1503	subtractBed	intrn	200925	200960	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	200925	200960	63	+	.	.
scaffold1503	subtractBed	intrn	200911	200960	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	200911	200960	64	+	.	.
scaffold1503	subtractBed	intrn	206447	207236	.	+	.	Parent=CGI_10009539;
	scaffold1503	TRF	Tandem_Repeat	206447	207236	1049	+	.	.
scaffold1503	subtractBed	intrn	222543	223280	.	-	.	Parent=CGI_10009541;
	scaffold1503	TRF	Tandem_Repeat	222543	223280	337	+	.	.
scaffold1503	subtractBed	intrn	227255	227455	.	-	.	Parent=CGI_10009541;
	scaffold1503	WUBlastX	LINE_RTE-BovB	227255	227455	123	+	.	.
scaffold1506	subtractBed	intrn	6595	6631	.	+	.	Parent=CGI_10003366;
	scaffold1506	TRF	Tandem_Repeat	6595	6631	74	+	.	.
scaffold1506	subtractBed	intrn	44065	44122	.	-	.	Parent=CGI_10003368;
	scaffold1506	TRF	Tandem_Repeat	44065	44122	116	+	.	.
scaffold1506	subtractBed	intrn	44481	44539	.	-	.	Parent=CGI_10003368;
	scaffold1506	TRF	Tandem_Repeat	44481	44539	118	+	.	.
scaffold1507	subtractBed	intrn	1161	1191	.	+	.	Parent=CGI_10001767;
	scaffold1507	TRF	Tandem_Repeat	1161	1191	62	+	.	.
scaffold1507	subtractBed	intrn	2071	2106	.	+	.	Parent=CGI_10001767;
	scaffold1507	TRF	Tandem_Repeat	2071	2106	72	+	.	.
scaffold1507	subtractBed	intrn	9652	10781	.	+	.	Parent=CGI_10001767;
	scaffold1507	TRF	Tandem_Repeat	9652	10781	783	+	.	.
scaffold1507	subtractBed	intrn	9681	10269	.	+	.	Parent=CGI_10001767;
	scaffold1507	TRF	Tandem_Repeat	9681	10269	454	+	.	.
scaffold1507	subtractBed	intrn	9652	10781	.	-	.	Parent=CGI_10001768;
	scaffold1507	TRF	Tandem_Repeat	9652	10781	783	+	.	.
scaffold1507	subtractBed	intrn	9681	10269	.	-	.	Parent=CGI_10001768;
	scaffold1507	TRF	Tandem_Repeat	9681	10269	454	+	.	.
scaffold1507	subtractBed	intrn	13515	13787	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	13515	13787	189	+	.	.
scaffold1507	subtractBed	intrn	13898	14131	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	13898	14131	144	+	.	.
scaffold1507	subtractBed	intrn	14107	14325	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	14107	14325	99	+	.	.
scaffold1507	subtractBed	intrn	12947	13423	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	12947	13423	145	+	.	.
scaffold1507	subtractBed	intrn	13353	13787	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	13353	13787	108	+	.	.
scaffold1507	subtractBed	intrn	13521	14015	.	-	.	Parent=CGI_10001768;
	scaffold1507	WUBlastX	LTR_Ngaro	13521	14015	118	+	.	.
scaffold1508	subtractBed	intrn	33105	33160	.	-	.	Parent=CGI_10007801;
	scaffold1508	TRF	Tandem_Repeat	33105	33160	78	+	.	.
scaffold1508	subtractBed	intrn	42742	42967	.	-	.	Parent=CGI_10007801;
	scaffold1508	TRF	Tandem_Repeat	42742	42967	337	+	.	.
scaffold1508	subtractBed	intrn	67372	67430	.	-	.	Parent=CGI_10007801;
	scaffold1508	TRF	Tandem_Repeat	67372	67430	118	+	.	.
scaffold1508	subtractBed	intrn	97198	97240	.	+	.	Parent=CGI_10007803;
	scaffold1508	TRF	Tandem_Repeat	97198	97240	86	+	.	.
scaffold1508	subtractBed	intrn	98520	98572	.	+	.	Parent=CGI_10007803;
	scaffold1508	TRF	Tandem_Repeat	98520	98572	97	+	.	.
scaffold1508	subtractBed	intrn	110634	110688	.	+	.	Parent=CGI_10007804;
	scaffold1508	TRF	Tandem_Repeat	110634	110688	110	+	.	.
scaffold1508	subtractBed	intrn	117132	117228	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	117132	117228	103	+	.	.
scaffold1508	subtractBed	intrn	117146	117216	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	117146	117216	87	+	.	.
scaffold1508	subtractBed	intrn	119156	119203	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	119156	119203	51	+	.	.
scaffold1508	subtractBed	intrn	119159	119203	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	119159	119203	72	+	.	.
scaffold1508	subtractBed	intrn	132588	132649	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	132588	132649	124	+	.	.
scaffold1508	subtractBed	intrn	141328	142038	.	-	.	Parent=CGI_10007806;
	scaffold1508	TRF	Tandem_Repeat	141328	142078	1020	+	.	.
scaffold1508	subtractBed	intrn	143699	144730	.	-	.	Parent=CGI_10007806;
	scaffold1508	WUBlastX	DNA_TcMar-Tc1	143699	144730	417	+	.	.
scaffold1508	subtractBed	intrn	132588	132649	.	+	.	Parent=CGI_10007807;
	scaffold1508	TRF	Tandem_Repeat	132588	132649	124	+	.	.
scaffold1508	subtractBed	intrn	141328	142038	.	+	.	Parent=CGI_10007807;
	scaffold1508	TRF	Tandem_Repeat	141328	142078	1020	+	.	.
scaffold1508	subtractBed	intrn	155653	155723	.	+	.	Parent=CGI_10007809;
	scaffold1508	TRF	Tandem_Repeat	155653	155723	88	+	.	.
scaffold1508	subtractBed	intrn	155653	155714	.	+	.	Parent=CGI_10007809;
	scaffold1508	TRF	Tandem_Repeat	155653	155714	70	+	.	.
scaffold1508	subtractBed	intrn	156554	156602	.	+	.	Parent=CGI_10007809;
	scaffold1508	TRF	Tandem_Repeat	156554	156602	82	+	.	.
scaffold1508	subtractBed	intrn	160161	160204	.	+	.	Parent=CGI_10007809;
	scaffold1508	TRF	Tandem_Repeat	160161	160204	88	+	.	.
scaffold1509	subtractBed	intrn	29731	29891	.	-	.	Parent=CGI_10007240;
	scaffold1509	TRF	Tandem_Repeat	29731	29891	85	+	.	.
scaffold1509	subtractBed	intrn	29981	30068	.	-	.	Parent=CGI_10007240;
	scaffold1509	TRF	Tandem_Repeat	29981	30068	167	+	.	.
scaffold1509	subtractBed	intrn	30810	30992	.	-	.	Parent=CGI_10007240;
	scaffold1509	TRF	Tandem_Repeat	30810	30992	89	+	.	.
scaffold1509	subtractBed	intrn	32553	32621	.	-	.	Parent=CGI_10007240;
	scaffold1509	TRF	Tandem_Repeat	32553	32621	122	+	.	.
scaffold1509	subtractBed	intrn	34287	34335	.	-	.	Parent=CGI_10007240;
	scaffold1509	TRF	Tandem_Repeat	34287	34335	89	+	.	.
scaffold1509	subtractBed	intrn	109214	109255	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	109214	109255	77	+	.	.
scaffold1509	subtractBed	intrn	111055	111108	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	111055	111108	99	+	.	.
scaffold1509	subtractBed	intrn	112564	112613	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	112564	112613	100	+	.	.
scaffold1509	subtractBed	intrn	115789	115867	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	115789	115867	144	+	.	.
scaffold1509	subtractBed	intrn	121037	121097	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	121037	121097	122	+	.	.
scaffold1509	subtractBed	intrn	126890	126938	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	126890	126938	89	+	.	.
scaffold1509	subtractBed	intrn	132692	132767	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	132692	132767	145	+	.	.
scaffold1509	subtractBed	intrn	138207	138483	.	-	.	Parent=CGI_10007241;
	scaffold1509	TRF	Tandem_Repeat	138207	138483	374	+	.	.
scaffold1512	subtractBed	intrn	31110	31155	.	+	.	Parent=CGI_10019850;
	scaffold1512	TRF	Tandem_Repeat	31110	31155	58	+	.	.
scaffold1512	subtractBed	intrn	31747	31793	.	+	.	Parent=CGI_10019850;
	scaffold1512	TRF	Tandem_Repeat	31747	31793	58	+	.	.
scaffold1512	subtractBed	intrn	104774	104904	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	103903	104904	435	-	.	.
scaffold1512	subtractBed	intrn	109814	109969	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	109814	109969	25	-	.	.
scaffold1512	subtractBed	intrn	108350	109927	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	108350	109927	375	-	.	.
scaffold1512	subtractBed	intrn	108227	108421	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	108227	108421	83	-	.	.
scaffold1512	subtractBed	intrn	108542	109861	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	108542	109861	1264	-	.	.
scaffold1512	subtractBed	intrn	107363	107857	.	-	.	Parent=CGI_10019851;
	scaffold1512	WUBlastX	LTR_Gypsy	107363	107857	121	-	.	.
scaffold1512	subtractBed	intrn	182541	182573	.	-	.	Parent=CGI_10019855;
	scaffold1512	TRF	Tandem_Repeat	182541	182573	66	+	.	.
scaffold1512	subtractBed	intrn	182541	182573	.	+	.	Parent=CGI_10019856;
	scaffold1512	TRF	Tandem_Repeat	182541	182573	66	+	.	.
scaffold1512	subtractBed	intrn	197973	198071	.	+	.	Parent=CGI_10019857;
	scaffold1512	TRF	Tandem_Repeat	197973	198071	83	+	.	.
scaffold1512	subtractBed	intrn	199113	199206	.	+	.	Parent=CGI_10019857;
	scaffold1512	TRF	Tandem_Repeat	199113	199206	109	+	.	.
scaffold1512	subtractBed	intrn	299738	299766	.	-	.	Parent=CGI_10019863;
	scaffold1512	TRF	Tandem_Repeat	299738	299766	51	+	.	.
scaffold1512	subtractBed	intrn	343886	343917	.	+	.	Parent=CGI_10019866;
	scaffold1512	TRF	Tandem_Repeat	343886	343917	55	+	.	.
scaffold1512	subtractBed	intrn	499737	499741	.	-	.	Parent=CGI_10019873;
	scaffold1512	WUBlastX	LINE_RTE-BovB	499737	499943	76	+	.	.
scaffold1512	subtractBed	intrn	526667	527019	.	-	.	Parent=CGI_10019876;
	scaffold1512	TRF	Tandem_Repeat	526667	527019	514	+	.	.
scaffold1512	subtractBed	intrn	592445	593569	.	-	.	Parent=CGI_10019880;
	scaffold1512	TRF	Tandem_Repeat	592445	593569	1562	+	.	.
scaffold1512	subtractBed	intrn	593600	593659	.	-	.	Parent=CGI_10019880;
	scaffold1512	TRF	Tandem_Repeat	593600	593659	75	+	.	.
scaffold1512	subtractBed	intrn	593596	593658	.	-	.	Parent=CGI_10019880;
	scaffold1512	TRF	Tandem_Repeat	593596	593658	99	+	.	.
scaffold1512	subtractBed	intrn	593593	593658	.	-	.	Parent=CGI_10019880;
	scaffold1512	TRF	Tandem_Repeat	593593	593658	105	+	.	.
scaffold1514	subtractBed	intrn	44424	44470	.	+	.	Parent=CGI_10005308;
	scaffold1514	TRF	Tandem_Repeat	44424	44470	85	+	.	.
scaffold1515	subtractBed	intrn	38980	39244	.	-	.	Parent=CGI_10004443;
	scaffold1515	TRF	Tandem_Repeat	38980	39244	232	+	.	.
scaffold1518	subtractBed	intrn	57608	58224	.	+	.	Parent=CGI_10017788;
	scaffold1518	TRF	Tandem_Repeat	57608	58224	856	+	.	.
scaffold1518	subtractBed	intrn	66718	66749	.	+	.	Parent=CGI_10017788;
	scaffold1518	TRF	Tandem_Repeat	66718	66749	64	+	.	.
scaffold1518	subtractBed	intrn	73406	74112	.	+	.	Parent=CGI_10017788;
	scaffold1518	TRF	Tandem_Repeat	73406	74112	949	+	.	.
scaffold1518	subtractBed	intrn	75961	76206	.	+	.	Parent=CGI_10017788;
	scaffold1518	WUBlastX	LTR_DIRS	75961	76206	129	-	.	.
scaffold1518	subtractBed	intrn	78238	78298	.	+	.	Parent=CGI_10017789;
	scaffold1518	TRF	Tandem_Repeat	78238	78298	122	+	.	.
scaffold1518	subtractBed	intrn	107017	107306	.	-	.	Parent=CGI_10017792;
	scaffold1518	TRF	Tandem_Repeat	107017	107306	221	+	.	.
scaffold1518	subtractBed	intrn	129801	129994	.	-	.	Parent=CGI_10017794;
	scaffold1518	TRF	Tandem_Repeat	129801	130002	147	+	.	.
scaffold1518	subtractBed	intrn	135145	135199	.	-	.	Parent=CGI_10017794;
	scaffold1518	TRF	Tandem_Repeat	135145	135199	110	+	.	.
scaffold1518	subtractBed	intrn	136316	136373	.	-	.	Parent=CGI_10017794;
	scaffold1518	TRF	Tandem_Repeat	136316	136373	116	+	.	.
scaffold1518	subtractBed	intrn	147470	147543	.	-	.	Parent=CGI_10017795;
	scaffold1518	TRF	Tandem_Repeat	147470	147543	94	+	.	.
scaffold1518	subtractBed	intrn	150045	150250	.	-	.	Parent=CGI_10017795;
	scaffold1518	TRF	Tandem_Repeat	150045	150250	349	+	.	.
scaffold1518	subtractBed	intrn	157632	157976	.	+	.	Parent=CGI_10017796;
	scaffold1518	TRF	Tandem_Repeat	157632	157976	573	+	.	.
scaffold1518	subtractBed	intrn	159520	159849	.	+	.	Parent=CGI_10017796;
	scaffold1518	WUBlastX	DNA_hAT-Tip100	159520	159849	90	+	.	.
scaffold1518	subtractBed	intrn	159448	159714	.	+	.	Parent=CGI_10017796;
	scaffold1518	WUBlastX	DNA_hAT-Tip100	159448	159714	63	+	.	.
scaffold1518	subtractBed	intrn	159499	159732	.	+	.	Parent=CGI_10017796;
	scaffold1518	WUBlastX	DNA_hAT-Tip100	159499	159732	181	+	.	.
scaffold1518	subtractBed	intrn	162634	163582	.	+	.	Parent=CGI_10017796;
	scaffold1518	TRF	Tandem_Repeat	162634	163582	791	+	.	.
scaffold1518	subtractBed	intrn	162589	164300	.	+	.	Parent=CGI_10017796;
	scaffold1518	TRF	Tandem_Repeat	162589	164300	479	+	.	.
scaffold1518	subtractBed	intrn	162593	164294	.	+	.	Parent=CGI_10017796;
	scaffold1518	TRF	Tandem_Repeat	162593	164294	1052	+	.	.
scaffold1518	subtractBed	intrn	162580	164308	.	+	.	Parent=CGI_10017796;
	scaffold1518	TRF	Tandem_Repeat	162580	164308	1125	+	.	.
scaffold1518	subtractBed	intrn	174922	174956	.	+	.	Parent=CGI_10017797;
	scaffold1518	TRF	Tandem_Repeat	174922	174956	70	+	.	.
scaffold1518	subtractBed	intrn	176647	176793	.	+	.	Parent=CGI_10017797;
	scaffold1518	TRF	Tandem_Repeat	176647	176793	213	+	.	.
scaffold1518	subtractBed	intrn	210456	210520	.	+	.	Parent=CGI_10017800;
	scaffold1518	TRF	Tandem_Repeat	210456	210520	103	+	.	.
scaffold1518	subtractBed	intrn	210459	210520	.	+	.	Parent=CGI_10017800;
	scaffold1518	TRF	Tandem_Repeat	210459	210520	115	+	.	.
scaffold1518	subtractBed	intrn	210560	211144	.	+	.	Parent=CGI_10017800;
	scaffold1518	WUBlastX	LINE_Penelope	210560	211144	39	+	.	.
scaffold1518	subtractBed	intrn	264392	264417	.	+	.	Parent=CGI_10017803;
	scaffold1518	TRF	Tandem_Repeat	264392	264417	52	+	.	.
scaffold1518	subtractBed	intrn	268905	269555	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	268905	269555	205	-	.	.
scaffold1518	subtractBed	intrn	271069	271848	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	271069	271848	190	-	.	.
scaffold1518	subtractBed	intrn	271081	271491	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	271081	271491	195	-	.	.
scaffold1518	subtractBed	intrn	269519	270628	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	269519	270628	704	-	.	.
scaffold1518	subtractBed	intrn	270928	271764	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	270928	271764	162	-	.	.
scaffold1518	subtractBed	intrn	268615	268911	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	268615	268911	142	-	.	.
scaffold1518	subtractBed	intrn	270637	270702	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LTR_Ngaro	270637	270702	22	-	.	.
scaffold1518	subtractBed	intrn	275443	275500	.	+	.	Parent=CGI_10017803;
	scaffold1518	TRF	Tandem_Repeat	275443	275500	82	+	.	.
scaffold1518	subtractBed	intrn	286024	286734	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	286024	286734	323	+	.	.
scaffold1518	subtractBed	intrn	286682	286735	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	286682	287965	721	+	.	.
scaffold1518	subtractBed	intrn	285447	285980	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	285447	285980	85	+	.	.
scaffold1518	subtractBed	intrn	285648	285986	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	285648	285986	103	+	.	.
scaffold1518	subtractBed	intrn	285771	285986	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	285771	285986	107	+	.	.
scaffold1518	subtractBed	intrn	285585	285983	.	+	.	Parent=CGI_10017803;
	scaffold1518	WUBlastX	LINE_L2	285585	285983	100	+	.	.
scaffold1518	subtractBed	intrn	302983	303087	.	+	.	Parent=CGI_10017805;
	scaffold1518	TRF	Tandem_Repeat	302983	303087	65	+	.	.
scaffold1518	subtractBed	intrn	303002	303106	.	+	.	Parent=CGI_10017805;
	scaffold1518	TRF	Tandem_Repeat	303002	303106	74	+	.	.
scaffold1518	subtractBed	intrn	307117	307164	.	+	.	Parent=CGI_10017805;
	scaffold1518	TRF	Tandem_Repeat	307117	307164	96	+	.	.
scaffold1518	subtractBed	intrn	330663	330693	.	+	.	Parent=CGI_10017806;
	scaffold1518	TRF	Tandem_Repeat	330663	330693	53	+	.	.
scaffold1518	subtractBed	intrn	341754	342068	.	+	.	Parent=CGI_10017806;
	scaffold1518	TRF	Tandem_Repeat	341754	342068	537	+	.	.
scaffold1518	subtractBed	intrn	360132	360275	.	+	.	Parent=CGI_10017807;
	scaffold1518	TRF	Tandem_Repeat	360132	360275	163	+	.	.
scaffold1518	subtractBed	intrn	360345	360528	.	+	.	Parent=CGI_10017807;
	scaffold1518	TRF	Tandem_Repeat	360345	360528	260	+	.	.
scaffold1518	subtractBed	intrn	381568	381601	.	-	.	Parent=CGI_10017809;
	scaffold1518	TRF	Tandem_Repeat	381568	381601	68	+	.	.
scaffold1518	subtractBed	intrn	409829	409890	.	-	.	Parent=CGI_10017811;
	scaffold1518	TRF	Tandem_Repeat	409829	409890	124	+	.	.
scaffold1518	subtractBed	intrn	425838	426292	.	-	.	Parent=CGI_10017813;
	scaffold1518	TRF	Tandem_Repeat	425838	426292	574	+	.	.
scaffold1518	subtractBed	intrn	425838	426292	.	-	.	Parent=CGI_10017813;
	scaffold1518	TRF	Tandem_Repeat	425838	426292	578	+	.	.
scaffold1518	subtractBed	intrn	455984	456387	.	+	.	Parent=CGI_10017815;
	scaffold1518	TRF	Tandem_Repeat	455984	456387	497	+	.	.
scaffold1518	subtractBed	intrn	455984	456387	.	+	.	Parent=CGI_10017815;
	scaffold1518	TRF	Tandem_Repeat	455984	456387	479	+	.	.
scaffold1518	subtractBed	intrn	455985	456383	.	+	.	Parent=CGI_10017815;
	scaffold1518	TRF	Tandem_Repeat	455985	456383	526	+	.	.
scaffold1518	subtractBed	intrn	456555	456592	.	+	.	Parent=CGI_10017815;
	scaffold1518	TRF	Tandem_Repeat	456555	456592	76	+	.	.
scaffold1518	subtractBed	intrn	466593	467307	.	+	.	Parent=CGI_10017815;
	scaffold1518	TRF	Tandem_Repeat	466593	467307	1053	+	.	.
scaffold1518	subtractBed	intrn	467730	467927	.	+	.	Parent=CGI_10017815;
	scaffold1518	WUBlastX	LTR_DIRS	467730	467927	106	-	.	.
scaffold1518	subtractBed	intrn	467930	468136	.	+	.	Parent=CGI_10017815;
	scaffold1518	WUBlastX	LTR_DIRS	467930	468136	50	-	.	.
scaffold1518	subtractBed	intrn	485282	485355	.	-	.	Parent=CGI_10017816;
	scaffold1518	TRF	Tandem_Repeat	485282	485355	53	+	.	.
scaffold1518	subtractBed	intrn	492976	493466	.	-	.	Parent=CGI_10017817;
	scaffold1518	TRF	Tandem_Repeat	492976	493466	504	+	.	.
scaffold1519	subtractBed	intrn	15367	15427	.	+	.	Parent=CGI_10005933;
	scaffold1519	TRF	Tandem_Repeat	15367	15427	113	+	.	.
scaffold1519	subtractBed	intrn	15518	15550	.	+	.	Parent=CGI_10005933;
	scaffold1519	TRF	Tandem_Repeat	15518	15550	57	+	.	.
scaffold1519	subtractBed	intrn	19055	19088	.	+	.	Parent=CGI_10005933;
	scaffold1519	TRF	Tandem_Repeat	19055	19088	52	+	.	.
scaffold152	subtractBed	intrn	62932	63847	.	-	.	Parent=CGI_10014894;
	scaffold152	TRF	Tandem_Repeat	62932	63847	1329	+	.	.
scaffold152	subtractBed	intrn	64604	64734	.	-	.	Parent=CGI_10014894;
	scaffold152	TRF	Tandem_Repeat	64604	64734	110	+	.	.
scaffold152	subtractBed	intrn	74822	74851	.	-	.	Parent=CGI_10014894;
	scaffold152	TRF	Tandem_Repeat	74822	74851	60	+	.	.
scaffold152	subtractBed	intrn	74536	74691	.	-	.	Parent=CGI_10014894;
	scaffold152	WUBlastX	LINE_CR1	74536	74691	78	+	.	.
scaffold152	subtractBed	intrn	74261	74626	.	-	.	Parent=CGI_10014894;
	scaffold152	WUBlastX	LINE_CR1-L2	74261	74626	78	+	.	.
scaffold152	subtractBed	intrn	74201	74530	.	-	.	Parent=CGI_10014894;
	scaffold152	WUBlastX	LINE_CR1	74201	74530	230	+	.	.
scaffold152	subtractBed	intrn	298151	298248	.	-	.	Parent=CGI_10014898;
	scaffold152	TRF	Tandem_Repeat	298151	298248	103	+	.	.
scaffold152	subtractBed	intrn	298151	298248	.	-	.	Parent=CGI_10014898;
	scaffold152	TRF	Tandem_Repeat	298151	298248	103	+	.	.
scaffold152	subtractBed	intrn	335060	335581	.	+	.	Parent=CGI_10014899;
	scaffold152	WUBlastX	LINE_L1-Tx1	335060	335581	223	-	.	.
scaffold152	subtractBed	intrn	335072	335674	.	+	.	Parent=CGI_10014899;
	scaffold152	WUBlastX	LINE_L1-Tx1	335072	335674	103	-	.	.
scaffold152	subtractBed	intrn	342560	342952	.	+	.	Parent=CGI_10014899;
	scaffold152	WUBlastX	LTR_Ngaro	342560	342952	88	+	.	.
scaffold152	subtractBed	intrn	348045	348092	.	+	.	Parent=CGI_10014899;
	scaffold152	TRF	Tandem_Repeat	348045	348092	55	+	.	.
scaffold152	subtractBed	intrn	348059	348108	.	+	.	Parent=CGI_10014899;
	scaffold152	TRF	Tandem_Repeat	348059	348108	50	+	.	.
scaffold1521	subtractBed	intrn	13218	13251	.	+	.	Parent=CGI_10017929;
	scaffold1521	TRF	Tandem_Repeat	13218	13251	68	+	.	.
scaffold1521	subtractBed	intrn	72251	72463	.	+	.	Parent=CGI_10017931;
	scaffold1521	TRF	Tandem_Repeat	72251	72463	204	+	.	.
scaffold1521	subtractBed	intrn	65510	66590	.	+	.	Parent=CGI_10017931;
	scaffold1521	TRF	Tandem_Repeat	65510	66590	1526	+	.	.
scaffold1521	subtractBed	intrn	82712	83496	.	+	.	Parent=CGI_10017931;
	scaffold1521	TRF	Tandem_Repeat	82712	83496	1115	+	.	.
scaffold1521	subtractBed	intrn	139529	139565	.	-	.	Parent=CGI_10017933;
	scaffold1521	TRF	Tandem_Repeat	139529	139565	74	+	.	.
scaffold1521	subtractBed	intrn	140520	140854	.	-	.	Parent=CGI_10017933;
	scaffold1521	TRF	Tandem_Repeat	140520	140854	439	+	.	.
scaffold1521	subtractBed	intrn	140511	140836	.	-	.	Parent=CGI_10017933;
	scaffold1521	TRF	Tandem_Repeat	140511	140836	197	+	.	.
scaffold1521	subtractBed	intrn	176872	176957	.	-	.	Parent=CGI_10017935;
	scaffold1521	TRF	Tandem_Repeat	176872	176957	172	+	.	.
scaffold1521	subtractBed	intrn	194735	194860	.	+	.	Parent=CGI_10017937;
	scaffold1521	TRF	Tandem_Repeat	194735	194860	110	+	.	.
scaffold1521	subtractBed	intrn	198862	198905	.	+	.	Parent=CGI_10017937;
	scaffold1521	TRF	Tandem_Repeat	198862	198905	88	+	.	.
scaffold1521	subtractBed	intrn	204305	204330	.	+	.	Parent=CGI_10017937;
	scaffold1521	TRF	Tandem_Repeat	204305	204330	52	+	.	.
scaffold1521	subtractBed	intrn	204495	204520	.	+	.	Parent=CGI_10017937;
	scaffold1521	TRF	Tandem_Repeat	204495	204520	52	+	.	.
scaffold1521	subtractBed	intrn	206132	206167	.	+	.	Parent=CGI_10017937;
	scaffold1521	TRF	Tandem_Repeat	206132	206167	72	+	.	.
scaffold1521	subtractBed	intrn	218583	218643	.	+	.	Parent=CGI_10017939;
	scaffold1521	TRF	Tandem_Repeat	218583	218643	108	+	.	.
scaffold1521	subtractBed	intrn	217413	217655	.	+	.	Parent=CGI_10017939;
	scaffold1521	WUBlastX	DNA_TcMar-Tc1	217413	217655	112	+	.	.
scaffold1521	subtractBed	intrn	217494	217652	.	+	.	Parent=CGI_10017939;
	scaffold1521	WUBlastX	DNA_TcMar-Tc1	217494	217652	117	+	.	.
scaffold1521	subtractBed	intrn	217491	217688	.	+	.	Parent=CGI_10017939;
	scaffold1521	WUBlastX	DNA_TcMar-Tc1	217491	217688	90	+	.	.
scaffold1521	subtractBed	intrn	216817	217437	.	+	.	Parent=CGI_10017939;
	scaffold1521	WUBlastX	DNA_TcMar-Tc1	216817	217437	265	+	.	.
scaffold1521	subtractBed	intrn	217661	217798	.	+	.	Parent=CGI_10017939;
	scaffold1521	WUBlastX	DNA_TcMar-Tc1	217661	217798	72	+	.	.
scaffold1521	subtractBed	intrn	229805	229839	.	+	.	Parent=CGI_10017939;
	scaffold1521	TRF	Tandem_Repeat	229805	229839	52	+	.	.
scaffold1521	subtractBed	intrn	229789	229842	.	+	.	Parent=CGI_10017939;
	scaffold1521	TRF	Tandem_Repeat	229789	229842	67	+	.	.
scaffold1521	subtractBed	intrn	313165	313222	.	-	.	Parent=CGI_10017946;
	scaffold1521	TRF	Tandem_Repeat	313165	313222	107	+	.	.
scaffold1521	subtractBed	intrn	346800	346971	.	-	.	Parent=CGI_10017948;
	scaffold1521	TRF	Tandem_Repeat	346800	346971	229	+	.	.
scaffold1521	subtractBed	intrn	350489	350523	.	-	.	Parent=CGI_10017948;
	scaffold1521	TRF	Tandem_Repeat	350489	350523	70	+	.	.
scaffold1521	subtractBed	intrn	351752	351792	.	-	.	Parent=CGI_10017948;
	scaffold1521	TRF	Tandem_Repeat	351752	351792	64	+	.	.
scaffold1521	subtractBed	intrn	384366	384443	.	-	.	Parent=CGI_10017950;
	scaffold1521	TRF	Tandem_Repeat	384366	384443	142	+	.	.
scaffold1521	subtractBed	intrn	441397	441478	.	-	.	Parent=CGI_10017955;
	scaffold1521	TRF	Tandem_Repeat	441397	441478	101	+	.	.
scaffold1521	subtractBed	intrn	443688	443790	.	-	.	Parent=CGI_10017955;
	scaffold1521	TRF	Tandem_Repeat	443688	443790	188	+	.	.
scaffold1521	subtractBed	intrn	519075	519110	.	+	.	Parent=CGI_10017960;
	scaffold1521	TRF	Tandem_Repeat	519075	519110	56	+	.	.
scaffold1521	subtractBed	intrn	519642	519680	.	+	.	Parent=CGI_10017960;
	scaffold1521	TRF	Tandem_Repeat	519642	519680	69	+	.	.
scaffold1521	subtractBed	intrn	521800	521830	.	+	.	Parent=CGI_10017960;
	scaffold1521	TRF	Tandem_Repeat	521800	521830	62	+	.	.
scaffold1524	subtractBed	intrn	66549	66590	.	+	.	Parent=CGI_10007401;
	scaffold1524	TRF	Tandem_Repeat	66549	66590	75	+	.	.
scaffold1525	subtractBed	intrn	29601	29647	.	+	.	Parent=CGI_10013853;
	scaffold1525	TRF	Tandem_Repeat	29601	29647	69	+	.	.
scaffold1525	subtractBed	intrn	42155	42221	.	+	.	Parent=CGI_10013853;
	scaffold1525	TRF	Tandem_Repeat	42155	42221	134	+	.	.
scaffold1525	subtractBed	intrn	40701	41153	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1-Tx1	40701	41153	128	+	.	.
scaffold1525	subtractBed	intrn	42019	42144	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1	42019	42144	23	+	.	.
scaffold1525	subtractBed	intrn	39852	40067	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1-Tx1	39852	40067	39	+	.	.
scaffold1525	subtractBed	intrn	40070	40690	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1-Tx1	40070	40690	389	+	.	.
scaffold1525	subtractBed	intrn	40692	41075	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1-Tx1	40692	41075	232	+	.	.
scaffold1525	subtractBed	intrn	41165	41992	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1-Tx1	41165	41992	162	+	.	.
scaffold1525	subtractBed	intrn	39929	40654	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L1	39929	40654	145	+	.	.
scaffold1525	subtractBed	intrn	39140	39208	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_L2	39140	39208	21	+	.	.
scaffold1525	subtractBed	intrn	46466	46643	.	+	.	Parent=CGI_10013853;
	scaffold1525	TRF	Tandem_Repeat	46466	46643	80	+	.	.
scaffold1525	subtractBed	intrn	47700	47730	.	+	.	Parent=CGI_10013853;
	scaffold1525	TRF	Tandem_Repeat	47700	47730	53	+	.	.
scaffold1525	subtractBed	intrn	48682	48854	.	+	.	Parent=CGI_10013853;
	scaffold1525	TRF	Tandem_Repeat	48682	48854	70	+	.	.
scaffold1525	subtractBed	intrn	56222	57349	.	+	.	Parent=CGI_10013853;
	scaffold1525	WUBlastX	LINE_Penelope	56222	57349	513	+	.	.
scaffold1525	subtractBed	intrn	74702	74769	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	74702	74769	86	+	.	.
scaffold1525	subtractBed	intrn	82122	82146	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	82122	82146	50	+	.	.
scaffold1525	subtractBed	intrn	98775	98819	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	98775	98819	90	+	.	.
scaffold1525	subtractBed	intrn	99173	99208	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	99173	99208	72	+	.	.
scaffold1525	subtractBed	intrn	99876	99992	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	99876	99992	144	+	.	.
scaffold1525	subtractBed	intrn	100274	100346	.	+	.	Parent=CGI_10013854;
	scaffold1525	TRF	Tandem_Repeat	100274	100346	146	+	.	.
scaffold1525	subtractBed	intrn	155910	155945	.	+	.	Parent=CGI_10013858;
	scaffold1525	TRF	Tandem_Repeat	155910	155945	54	+	.	.
scaffold1525	subtractBed	intrn	156054	156098	.	+	.	Parent=CGI_10013858;
	scaffold1525	TRF	Tandem_Repeat	156054	156098	90	+	.	.
scaffold1525	subtractBed	intrn	165544	165685	.	+	.	Parent=CGI_10013858;
	scaffold1525	TRF	Tandem_Repeat	165544	165685	128	+	.	.
scaffold1525	subtractBed	intrn	165544	165685	.	-	.	Parent=CGI_10013859;
	scaffold1525	TRF	Tandem_Repeat	165544	165685	128	+	.	.
scaffold1525	subtractBed	intrn	210343	210368	.	-	.	Parent=CGI_10013862;
	scaffold1525	TRF	Tandem_Repeat	210343	210368	52	+	.	.
scaffold1525	subtractBed	intrn	230428	230433	.	-	.	Parent=CGI_10013864;
	scaffold1525	WUBlastX	DNA_Kolobok	230221	230433	69	-	.	.
scaffold1525	subtractBed	intrn	284350	284389	.	-	.	Parent=CGI_10013865;
	scaffold1525	TRF	Tandem_Repeat	284350	284389	53	+	.	.
scaffold1525	subtractBed	intrn	284353	284389	.	-	.	Parent=CGI_10013865;
	scaffold1525	TRF	Tandem_Repeat	284353	284389	65	+	.	.
scaffold1525	subtractBed	intrn	282633	282938	.	-	.	Parent=CGI_10013865;
	scaffold1525	WUBlastX	DNA_En-Spm	282633	282938	163	-	.	.
scaffold1525	subtractBed	intrn	282937	283011	.	-	.	Parent=CGI_10013865;
	scaffold1525	WUBlastX	DNA_En-Spm	282937	283011	27	-	.	.
scaffold1525	subtractBed	intrn	357248	357952	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	357248	357952	218	+	.	.
scaffold1525	subtractBed	intrn	355098	355502	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	355098	355502	95	+	.	.
scaffold1525	subtractBed	intrn	355480	357045	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	355480	357045	932	+	.	.
scaffold1525	subtractBed	intrn	354803	355078	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	354803	355078	47	+	.	.
scaffold1525	subtractBed	intrn	357086	357928	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	357086	357928	75	+	.	.
scaffold1525	subtractBed	intrn	354863	355090	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	354863	355090	69	+	.	.
scaffold1525	subtractBed	intrn	354539	355093	.	-	.	Parent=CGI_10013870;
	scaffold1525	WUBlastX	LTR_Ngaro	354539	355093	30	+	.	.
scaffold1526	subtractBed	intrn	33098	33133	.	+	.	Parent=CGI_10006180;
	scaffold1526	TRF	Tandem_Repeat	33098	33133	54	+	.	.
scaffold1526	subtractBed	intrn	33098	33133	.	-	.	Parent=CGI_10006181;
	scaffold1526	TRF	Tandem_Repeat	33098	33133	54	+	.	.
scaffold1526	subtractBed	intrn	51630	51666	.	-	.	Parent=CGI_10006183;
	scaffold1526	TRF	Tandem_Repeat	51630	51666	56	+	.	.
scaffold1526	subtractBed	intrn	51666	51693	.	-	.	Parent=CGI_10006183;
	scaffold1526	TRF	Tandem_Repeat	51666	51693	56	+	.	.
scaffold1526	subtractBed	intrn	52395	52554	.	-	.	Parent=CGI_10006183;
	scaffold1526	TRF	Tandem_Repeat	52395	52554	248	+	.	.
scaffold1526	subtractBed	intrn	58942	59087	.	-	.	Parent=CGI_10006185;
	scaffold1526	TRF	Tandem_Repeat	58942	59087	274	+	.	.
scaffold1526	subtractBed	intrn	60172	60218	.	-	.	Parent=CGI_10006185;
	scaffold1526	TRF	Tandem_Repeat	60172	60218	94	+	.	.
scaffold1526	subtractBed	intrn	71869	71923	.	-	.	Parent=CGI_10006185;
	scaffold1526	TRF	Tandem_Repeat	71869	71923	110	+	.	.
scaffold1526	subtractBed	intrn	75293	75325	.	+	.	Parent=CGI_10006186;
	scaffold1526	TRF	Tandem_Repeat	75293	75325	66	+	.	.
scaffold1526	subtractBed	intrn	87180	87317	.	-	.	Parent=CGI_10006187;
	scaffold1526	TRF	Tandem_Repeat	87180	87317	175	+	.	.
scaffold1526	subtractBed	intrn	88175	89098	.	-	.	Parent=CGI_10006187;
	scaffold1526	WUBlastX	DNA_TcMar-Tc2	88175	89098	436	-	.	.
scaffold1526	subtractBed	intrn	89085	89255	.	-	.	Parent=CGI_10006187;
	scaffold1526	WUBlastX	DNA_TcMar-Tc2	89085	89255	52	-	.	.
scaffold1527	subtractBed	intrn	159521	159803	.	-	.	Parent=CGI_10011614;
	scaffold1527	TRF	Tandem_Repeat	159521	159803	204	+	.	.
scaffold1527	subtractBed	intrn	159818	160345	.	-	.	Parent=CGI_10011614;
	scaffold1527	TRF	Tandem_Repeat	159818	160345	643	+	.	.
scaffold1528	subtractBed	intrn	40556	40626	.	-	.	Parent=CGI_10013212;
	scaffold1528	TRF	Tandem_Repeat	40556	40626	133	+	.	.
scaffold1528	subtractBed	intrn	40326	40511	.	-	.	Parent=CGI_10013212;
	scaffold1528	WUBlastX	LINE_RTE-X	40326	40511	53	-	.	.
scaffold1528	subtractBed	intrn	169337	169375	.	-	.	Parent=CGI_10013220;
	scaffold1528	TRF	Tandem_Repeat	169337	169375	78	+	.	.
scaffold1528	subtractBed	intrn	171689	171793	.	-	.	Parent=CGI_10013220;
	scaffold1528	TRF	Tandem_Repeat	171689	171793	167	+	.	.
scaffold1528	subtractBed	intrn	197767	197844	.	-	.	Parent=CGI_10013222;
	scaffold1528	TRF	Tandem_Repeat	197767	197844	52	+	.	.
scaffold1528	subtractBed	intrn	198707	199468	.	-	.	Parent=CGI_10013222;
	scaffold1528	TRF	Tandem_Repeat	198707	199468	1020	+	.	.
scaffold1528	subtractBed	intrn	199585	199610	.	-	.	Parent=CGI_10013222;
	scaffold1528	TRF	Tandem_Repeat	199585	199610	52	+	.	.
scaffold1528	subtractBed	intrn	200972	201034	.	-	.	Parent=CGI_10013222;
	scaffold1528	TRF	Tandem_Repeat	200972	201034	126	+	.	.
scaffold1528	subtractBed	intrn	197767	197844	.	+	.	Parent=CGI_10013223;
	scaffold1528	TRF	Tandem_Repeat	197767	197844	52	+	.	.
scaffold1528	subtractBed	intrn	198707	199468	.	+	.	Parent=CGI_10013223;
	scaffold1528	TRF	Tandem_Repeat	198707	199468	1020	+	.	.
scaffold1528	subtractBed	intrn	199585	199610	.	+	.	Parent=CGI_10013223;
	scaffold1528	TRF	Tandem_Repeat	199585	199610	52	+	.	.
scaffold1528	subtractBed	intrn	200972	201034	.	+	.	Parent=CGI_10013223;
	scaffold1528	TRF	Tandem_Repeat	200972	201034	126	+	.	.
scaffold1528	subtractBed	intrn	215413	216008	.	+	.	Parent=CGI_10013224;
	scaffold1528	TRF	Tandem_Repeat	215413	216008	280	+	.	.
scaffold1528	subtractBed	intrn	215413	215815	.	+	.	Parent=CGI_10013224;
	scaffold1528	TRF	Tandem_Repeat	215413	215815	213	+	.	.
scaffold1528	subtractBed	intrn	215730	215972	.	+	.	Parent=CGI_10013224;
	scaffold1528	TRF	Tandem_Repeat	215730	215972	292	+	.	.
scaffold1528	subtractBed	intrn	242218	242254	.	-	.	Parent=CGI_10013225;
	scaffold1528	TRF	Tandem_Repeat	242218	242254	74	+	.	.
scaffold1528	subtractBed	intrn	244676	244727	.	-	.	Parent=CGI_10013225;
	scaffold1528	TRF	Tandem_Repeat	244676	244727	104	+	.	.
scaffold1528	subtractBed	intrn	272955	272986	.	+	.	Parent=CGI_10013227;
	scaffold1528	TRF	Tandem_Repeat	272955	272986	64	+	.	.
scaffold1528	subtractBed	intrn	283566	283640	.	+	.	Parent=CGI_10013228;
	scaffold1528	TRF	Tandem_Repeat	283566	283640	150	+	.	.
scaffold1528	subtractBed	intrn	284654	284956	.	+	.	Parent=CGI_10013228;
	scaffold1528	TRF	Tandem_Repeat	284654	284956	453	+	.	.
scaffold1528	subtractBed	intrn	286587	286589	.	+	.	Parent=CGI_10013228;
	scaffold1528	WUBlastX	LINE_L1	286587	286661	21	+	.	.
scaffold1528	subtractBed	intrn	295752	295781	.	+	.	Parent=CGI_10013229;
	scaffold1528	TRF	Tandem_Repeat	295752	295781	60	+	.	.
scaffold1528	subtractBed	intrn	301763	302612	.	+	.	Parent=CGI_10013229;
	scaffold1528	TRF	Tandem_Repeat	301763	302612	1179	+	.	.
scaffold1528	subtractBed	intrn	315070	315156	.	+	.	Parent=CGI_10013229;
	scaffold1528	TRF	Tandem_Repeat	315070	315156	167	+	.	.
scaffold1532	subtractBed	intrn	8248	8298	.	+	.	Parent=CGI_10028231;
	scaffold1532	TRF	Tandem_Repeat	8248	8298	93	+	.	.
scaffold1532	subtractBed	intrn	73310	73565	.	+	.	Parent=CGI_10028233;
	scaffold1532	TRF	Tandem_Repeat	73310	73565	322	+	.	.
scaffold1532	subtractBed	intrn	108128	108403	.	-	.	Parent=CGI_10028235;
	scaffold1532	TRF	Tandem_Repeat	108128	108403	216	+	.	.
scaffold1532	subtractBed	intrn	176937	176953	.	-	.	Parent=CGI_10028236;
	scaffold1532	WUBlastX	DNA_Harbinger	176657	176953	77	-	.	.
scaffold1532	subtractBed	intrn	176937	176941	.	-	.	Parent=CGI_10028236;
	scaffold1532	WUBlastX	DNA_Harbinger	176747	176941	94	-	.	.
scaffold1532	subtractBed	intrn	199228	199322	.	-	.	Parent=CGI_10028237;
	scaffold1532	TRF	Tandem_Repeat	199228	199322	102	+	.	.
scaffold1532	subtractBed	intrn	326842	326887	.	+	.	Parent=CGI_10028244;
	scaffold1532	TRF	Tandem_Repeat	326842	326887	92	+	.	.
scaffold1532	subtractBed	intrn	330742	330851	.	+	.	Parent=CGI_10028244;
	scaffold1532	WUBlastX	LINE_RTE-X	330742	331482	199	-	.	.
scaffold1532	subtractBed	intrn	327178	330675	.	+	.	Parent=CGI_10028244;
	scaffold1532	WUBlastX	LINE_RTE-X	327178	330675	2069	-	.	.
scaffold1532	subtractBed	intrn	332533	332584	.	+	.	Parent=CGI_10028244;
	scaffold1532	TRF	Tandem_Repeat	332533	332584	104	+	.	.
scaffold1532	subtractBed	intrn	331441	331482	.	+	.	Parent=CGI_10028244;
	scaffold1532	WUBlastX	LINE_RTE-X	330742	331482	199	-	.	.
scaffold1532	subtractBed	intrn	326842	326887	.	-	.	Parent=CGI_10028245;
	scaffold1532	TRF	Tandem_Repeat	326842	326887	92	+	.	.
scaffold1532	subtractBed	intrn	330742	330851	.	-	.	Parent=CGI_10028245;
	scaffold1532	WUBlastX	LINE_RTE-X	330742	331482	199	-	.	.
scaffold1532	subtractBed	intrn	327178	330675	.	-	.	Parent=CGI_10028245;
	scaffold1532	WUBlastX	LINE_RTE-X	327178	330675	2069	-	.	.
scaffold1532	subtractBed	intrn	391970	392923	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	391970	392923	358	+	.	.
scaffold1532	subtractBed	intrn	392123	393085	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	392123	393085	394	+	.	.
scaffold1532	subtractBed	intrn	397883	397981	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	DNA_IS4EU	397883	397981	56	+	.	.
scaffold1532	subtractBed	intrn	393905	394525	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	393905	394525	95	+	.	.
scaffold1532	subtractBed	intrn	394034	394531	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	394034	394531	489	+	.	.
scaffold1532	subtractBed	intrn	394527	395360	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	394527	395360	569	+	.	.
scaffold1532	subtractBed	intrn	395371	396450	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	395371	396450	738	+	.	.
scaffold1532	subtractBed	intrn	397883	397954	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	DNA_IS4EU	397883	397954	57	+	.	.
scaffold1532	subtractBed	intrn	397421	397828	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	DNA_IS4EU	397421	397828	89	+	.	.
scaffold1532	subtractBed	intrn	393539	393670	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	393539	393670	31	+	.	.
scaffold1532	subtractBed	intrn	397397	397744	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	DNA_Kolobok-IS4	397397	397744	94	+	.	.
scaffold1532	subtractBed	intrn	393698	393784	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	393698	393784	27	+	.	.
scaffold1532	subtractBed	intrn	393767	394531	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	393767	394531	83	+	.	.
scaffold1532	subtractBed	intrn	393043	393513	.	+	.	Parent=CGI_10028249;
	scaffold1532	WUBlastX	LTR_Gypsy	393043	393513	125	+	.	.
scaffold1532	subtractBed	intrn	408086	408151	.	+	.	Parent=CGI_10028250;
	scaffold1532	TRF	Tandem_Repeat	408086	408151	132	+	.	.
scaffold1532	subtractBed	intrn	409084	409125	.	+	.	Parent=CGI_10028250;
	scaffold1532	TRF	Tandem_Repeat	409084	409125	68	+	.	.
scaffold1532	subtractBed	intrn	410802	412193	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410802	412193	431	-	.	.
scaffold1532	subtractBed	intrn	410296	410694	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410296	410694	102	-	.	.
scaffold1532	subtractBed	intrn	410766	410960	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410766	410960	51	-	.	.
scaffold1532	subtractBed	intrn	410799	411734	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410799	411734	478	-	.	.
scaffold1532	subtractBed	intrn	412293	412685	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_L1-Tx1	412293	412685	211	-	.	.
scaffold1532	subtractBed	intrn	410176	410643	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410176	410643	53	-	.	.
scaffold1532	subtractBed	intrn	409942	410019	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_R2	409942	410019	23	-	.	.
scaffold1532	subtractBed	intrn	411798	412280	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_I	411798	412280	38	-	.	.
scaffold1532	subtractBed	intrn	410799	411950	.	+	.	Parent=CGI_10028250;
	scaffold1532	WUBlastX	LINE_RTE-X	410799	411950	465	-	.	.
scaffold1532	subtractBed	intrn	525511	525548	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	525511	525548	76	+	.	.
scaffold1532	subtractBed	intrn	531214	531287	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	531214	531287	121	+	.	.
scaffold1532	subtractBed	intrn	531214	531287	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	531214	531287	121	+	.	.
scaffold1532	subtractBed	intrn	531214	531287	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	531214	531287	121	+	.	.
scaffold1532	subtractBed	intrn	533320	533389	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	533320	533389	113	+	.	.
scaffold1532	subtractBed	intrn	538544	538625	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	538544	538625	155	+	.	.
scaffold1532	subtractBed	intrn	538625	538664	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	538625	538664	53	+	.	.
scaffold1532	subtractBed	intrn	540476	540514	.	+	.	Parent=CGI_10028254;
	scaffold1532	TRF	Tandem_Repeat	540476	540514	78	+	.	.
scaffold1532	subtractBed	intrn	582038	582110	.	-	.	Parent=CGI_10028257;
	scaffold1532	TRF	Tandem_Repeat	582038	582110	146	+	.	.
scaffold1532	subtractBed	intrn	584333	584620	.	-	.	Parent=CGI_10028257;
	scaffold1532	TRF	Tandem_Repeat	584333	584620	354	+	.	.
scaffold1532	subtractBed	intrn	584403	584631	.	-	.	Parent=CGI_10028257;
	scaffold1532	TRF	Tandem_Repeat	584403	584631	276	+	.	.
scaffold1532	subtractBed	intrn	586778	587047	.	-	.	Parent=CGI_10028257;
	scaffold1532	WUBlastX	DNA_Kolobok	586778	587047	76	-	.	.
scaffold1532	subtractBed	intrn	587374	587454	.	-	.	Parent=CGI_10028257;
	scaffold1532	WUBlastX	DNA_Kolobok	587374	587454	24	-	.	.
scaffold1532	subtractBed	intrn	587688	587897	.	-	.	Parent=CGI_10028257;
	scaffold1532	WUBlastX	DNA_Kolobok	587688	587897	92	-	.	.
scaffold1532	subtractBed	intrn	586841	587047	.	-	.	Parent=CGI_10028257;
	scaffold1532	WUBlastX	DNA_Kolobok	586841	587047	84	-	.	.
scaffold1532	subtractBed	intrn	587670	587996	.	-	.	Parent=CGI_10028257;
	scaffold1532	WUBlastX	DNA_Kolobok	587670	587996	88	-	.	.
scaffold1532	subtractBed	intrn	595059	595121	.	+	.	Parent=CGI_10028259;
	scaffold1532	TRF	Tandem_Repeat	595059	595121	65	+	.	.
scaffold1532	subtractBed	intrn	609146	609265	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	609146	609265	65	-	.	.
scaffold1532	subtractBed	intrn	608872	608943	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	608872	608943	25	-	.	.
scaffold1532	subtractBed	intrn	606907	607175	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	606840	607175	68	-	.	.
scaffold1532	subtractBed	intrn	608523	608678	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	608523	608678	56	-	.	.
scaffold1532	subtractBed	intrn	609026	609265	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	609026	609265	35	-	.	.
scaffold1532	subtractBed	intrn	606907	607109	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	606633	607109	160	-	.	.
scaffold1532	subtractBed	intrn	607338	607526	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	607338	607526	105	-	.	.
scaffold1532	subtractBed	intrn	609844	609966	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	609844	609966	87	-	.	.
scaffold1532	subtractBed	intrn	610151	610196	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	610151	610570	113	-	.	.
scaffold1532	subtractBed	intrn	607338	607589	.	-	.	Parent=CGI_10028261;
	scaffold1532	WUBlastX	DNA_PiggyBac	607338	607589	59	-	.	.
scaffold1532	subtractBed	intrn	635407	635503	.	+	.	Parent=CGI_10028263;
	scaffold1532	TRF	Tandem_Repeat	635407	635503	135	+	.	.
scaffold1532	subtractBed	intrn	640868	641413	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	640868	641413	145	+	.	.
scaffold1532	subtractBed	intrn	641072	641425	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	641072	641425	153	+	.	.
scaffold1532	subtractBed	intrn	641360	641776	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	641360	641776	89	+	.	.
scaffold1532	subtractBed	intrn	639358	640545	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	639358	640545	257	+	.	.
scaffold1532	subtractBed	intrn	640269	640919	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	640269	640919	202	+	.	.
scaffold1532	subtractBed	intrn	641498	641788	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	641498	641788	124	+	.	.
scaffold1532	subtractBed	intrn	638912	639115	.	+	.	Parent=CGI_10028264;
	scaffold1532	WUBlastX	LTR_Ngaro	638912	639115	105	+	.	.
scaffold1532	subtractBed	intrn	728283	728882	.	-	.	Parent=CGI_10028267;
	scaffold1532	TRF	Tandem_Repeat	728283	728882	1092	+	.	.
scaffold1532	subtractBed	intrn	729858	729995	.	-	.	Parent=CGI_10028267;
	scaffold1532	TRF	Tandem_Repeat	729858	730020	221	+	.	.
scaffold1532	subtractBed	intrn	733574	733607	.	-	.	Parent=CGI_10028267;
	scaffold1532	TRF	Tandem_Repeat	733574	733607	68	+	.	.
scaffold1532	subtractBed	intrn	764966	765027	.	+	.	Parent=CGI_10028269;
	scaffold1532	TRF	Tandem_Repeat	764966	765027	88	+	.	.
scaffold1532	subtractBed	intrn	783901	783927	.	-	.	Parent=CGI_10028271;
	scaffold1532	TRF	Tandem_Repeat	783901	783927	54	+	.	.
scaffold1532	subtractBed	intrn	784581	784637	.	-	.	Parent=CGI_10028271;
	scaffold1532	TRF	Tandem_Repeat	784581	784637	114	+	.	.
scaffold1532	subtractBed	intrn	790561	790627	.	-	.	Parent=CGI_10028271;
	scaffold1532	TRF	Tandem_Repeat	790561	790627	134	+	.	.
scaffold1532	subtractBed	intrn	796209	796249	.	-	.	Parent=CGI_10028272;
	scaffold1532	TRF	Tandem_Repeat	796209	796249	82	+	.	.
scaffold1532	subtractBed	intrn	798764	798814	.	-	.	Parent=CGI_10028272;
	scaffold1532	TRF	Tandem_Repeat	798764	798814	88	+	.	.
scaffold1532	subtractBed	intrn	799691	799787	.	-	.	Parent=CGI_10028272;
	scaffold1532	TRF	Tandem_Repeat	799691	799787	88	+	.	.
scaffold1532	subtractBed	intrn	815120	815153	.	-	.	Parent=CGI_10028272;
	scaffold1532	TRF	Tandem_Repeat	815120	815153	50	+	.	.
scaffold1532	subtractBed	intrn	815153	815196	.	-	.	Parent=CGI_10028272;
	scaffold1532	TRF	Tandem_Repeat	815153	815196	70	+	.	.
scaffold1532	subtractBed	intrn	929520	930239	.	+	.	Parent=CGI_10028274;
	scaffold1532	TRF	Tandem_Repeat	929520	930239	212	+	.	.
scaffold1532	subtractBed	intrn	929599	930033	.	+	.	Parent=CGI_10028274;
	scaffold1532	TRF	Tandem_Repeat	929599	930033	419	+	.	.
scaffold1532	subtractBed	intrn	931181	931756	.	+	.	Parent=CGI_10028274;
	scaffold1532	TRF	Tandem_Repeat	931181	931756	202	+	.	.
scaffold1532	subtractBed	intrn	958207	958854	.	+	.	Parent=CGI_10028276;
	scaffold1532	WUBlastX	LINE_Penelope	958207	958854	160	+	.	.
scaffold1532	subtractBed	intrn	957875	958174	.	+	.	Parent=CGI_10028276;
	scaffold1532	WUBlastX	LINE_Penelope	957875	958174	103	+	.	.
scaffold1532	subtractBed	intrn	957848	958207	.	+	.	Parent=CGI_10028276;
	scaffold1532	WUBlastX	LINE_Penelope	957848	958207	37	+	.	.
scaffold1532	subtractBed	intrn	963188	963278	.	+	.	Parent=CGI_10028276;
	scaffold1532	TRF	Tandem_Repeat	963188	963278	86	+	.	.
scaffold1532	subtractBed	intrn	963264	963324	.	+	.	Parent=CGI_10028276;
	scaffold1532	TRF	Tandem_Repeat	963264	963324	50	+	.	.
scaffold1532	subtractBed	intrn	974934	975317	.	-	.	Parent=CGI_10028277;
	scaffold1532	WUBlastX	LINE_RTE-X	974934	975317	78	-	.	.
scaffold1532	subtractBed	intrn	974994	975323	.	-	.	Parent=CGI_10028277;
	scaffold1532	WUBlastX	LINE_RTE-X	974994	975323	135	-	.	.
scaffold1532	subtractBed	intrn	975120	975362	.	-	.	Parent=CGI_10028277;
	scaffold1532	WUBlastX	LINE_RTE-X	975120	975362	85	-	.	.
scaffold1532	subtractBed	intrn	988091	988837	.	-	.	Parent=CGI_10028278;
	scaffold1532	WUBlastX	LTR_Gypsy	988091	988837	86	+	.	.
scaffold1532	subtractBed	intrn	987745	988080	.	-	.	Parent=CGI_10028278;
	scaffold1532	WUBlastX	LTR_Gypsy	987745	988080	111	+	.	.
scaffold1532	subtractBed	intrn	988770	988898	.	-	.	Parent=CGI_10028278;
	scaffold1532	WUBlastX	LTR_Gypsy	988770	988898	26	+	.	.
scaffold1532	subtractBed	intrn	988094	988651	.	-	.	Parent=CGI_10028278;
	scaffold1532	WUBlastX	LTR_Gypsy	988094	988651	218	+	.	.
scaffold1532	subtractBed	intrn	988711	988866	.	-	.	Parent=CGI_10028278;
	scaffold1532	WUBlastX	LTR_Gypsy	988711	988866	57	+	.	.
scaffold1532	subtractBed	intrn	1134685	1135227	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1134685	1135227	101	-	.	.
scaffold1532	subtractBed	intrn	1133427	1133612	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133427	1133612	55	-	.	.
scaffold1532	subtractBed	intrn	1133439	1133594	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133439	1133594	59	-	.	.
scaffold1532	subtractBed	intrn	1133313	1133585	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133313	1133585	37	-	.	.
scaffold1532	subtractBed	intrn	1133710	1133892	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133710	1133892	58	-	.	.
scaffold1532	subtractBed	intrn	1133882	1134196	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133882	1134196	66	-	.	.
scaffold1532	subtractBed	intrn	1134217	1134363	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1134217	1134363	45	-	.	.
scaffold1532	subtractBed	intrn	1133631	1133750	.	+	.	Parent=CGI_10028283;
	scaffold1532	WUBlastX	LTR_Ngaro	1133631	1133750	33	-	.	.
scaffold1532	subtractBed	intrn	1144266	1144324	.	+	.	Parent=CGI_10028283;
	scaffold1532	TRF	Tandem_Repeat	1144266	1144324	118	+	.	.
scaffold1532	subtractBed	intrn	1306884	1306925	.	-	.	Parent=CGI_10028288;
	scaffold1532	TRF	Tandem_Repeat	1306884	1306925	84	+	.	.
scaffold1532	subtractBed	intrn	1314445	1314477	.	-	.	Parent=CGI_10028288;
	scaffold1532	TRF	Tandem_Repeat	1314445	1314477	50	+	.	.
scaffold1532	subtractBed	intrn	1332475	1332529	.	-	.	Parent=CGI_10028288;
	scaffold1532	TRF	Tandem_Repeat	1332475	1332529	110	+	.	.
scaffold1532	subtractBed	intrn	1335853	1335890	.	-	.	Parent=CGI_10028288;
	scaffold1532	TRF	Tandem_Repeat	1335853	1335890	76	+	.	.
scaffold1532	subtractBed	intrn	1380092	1380270	.	-	.	Parent=CGI_10028289;
	scaffold1532	TRF	Tandem_Repeat	1380092	1380270	126	+	.	.
scaffold1532	subtractBed	intrn	1380142	1380256	.	-	.	Parent=CGI_10028289;
	scaffold1532	TRF	Tandem_Repeat	1380142	1380256	106	+	.	.
scaffold1532	subtractBed	intrn	1380433	1380622	.	-	.	Parent=CGI_10028289;
	scaffold1532	TRF	Tandem_Repeat	1380433	1380622	326	+	.	.
scaffold1532	subtractBed	intrn	1413517	1413572	.	+	.	Parent=CGI_10028293;
	scaffold1532	TRF	Tandem_Repeat	1413517	1413572	103	+	.	.
scaffold1532	subtractBed	intrn	1424286	1424370	.	-	.	Parent=CGI_10028294;
	scaffold1532	TRF	Tandem_Repeat	1424286	1424370	163	+	.	.
scaffold1532	subtractBed	intrn	1426448	1426479	.	-	.	Parent=CGI_10028294;
	scaffold1532	TRF	Tandem_Repeat	1426448	1426479	64	+	.	.
scaffold1532	subtractBed	intrn	1428776	1428827	.	-	.	Parent=CGI_10028294;
	scaffold1532	TRF	Tandem_Repeat	1428776	1428827	104	+	.	.
scaffold1532	subtractBed	intrn	1461501	1461549	.	-	.	Parent=CGI_10028297;
	scaffold1532	TRF	Tandem_Repeat	1461501	1461549	98	+	.	.
scaffold1532	subtractBed	intrn	1463959	1464024	.	-	.	Parent=CGI_10028297;
	scaffold1532	TRF	Tandem_Repeat	1463959	1464024	132	+	.	.
scaffold1532	subtractBed	intrn	1472501	1473049	.	-	.	Parent=CGI_10028298;
	scaffold1532	TRF	Tandem_Repeat	1472501	1473049	737	+	.	.
scaffold1532	subtractBed	intrn	1504845	1505080	.	+	.	Parent=CGI_10028301;
	scaffold1532	TRF	Tandem_Repeat	1504845	1505080	212	+	.	.
scaffold1532	subtractBed	intrn	1580767	1580804	.	-	.	Parent=CGI_10028312;
	scaffold1532	TRF	Tandem_Repeat	1580767	1580804	76	+	.	.
scaffold1532	subtractBed	intrn	1591819	1594503	.	-	.	Parent=CGI_10028312;
	scaffold1532	TRF	Tandem_Repeat	1591819	1594503	3530	+	.	.
scaffold1532	subtractBed	intrn	1615761	1615822	.	+	.	Parent=CGI_10028314;
	scaffold1532	TRF	Tandem_Repeat	1615761	1615822	124	+	.	.
scaffold1532	subtractBed	intrn	1618838	1618873	.	+	.	Parent=CGI_10028314;
	scaffold1532	TRF	Tandem_Repeat	1618838	1618873	54	+	.	.
scaffold1532	subtractBed	intrn	1624310	1625049	.	+	.	Parent=CGI_10028314;
	scaffold1532	TRF	Tandem_Repeat	1624310	1625049	1063	+	.	.
scaffold1532	subtractBed	intrn	1625366	1626580	.	+	.	Parent=CGI_10028314;
	scaffold1532	TRF	Tandem_Repeat	1625366	1626580	1878	+	.	.
scaffold1533	subtractBed	intrn	3846	4842	.	-	.	Parent=CGI_10012863;
	scaffold1533	TRF	Tandem_Repeat	3846	4842	1047	+	.	.
scaffold1533	subtractBed	intrn	3846	4842	.	-	.	Parent=CGI_10012863;
	scaffold1533	TRF	Tandem_Repeat	3846	4842	1205	+	.	.
scaffold1533	subtractBed	intrn	3846	4842	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	3846	4842	1047	+	.	.
scaffold1533	subtractBed	intrn	3846	4842	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	3846	4842	1205	+	.	.
scaffold1533	subtractBed	intrn	15544	15798	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	15544	15798	474	+	.	.
scaffold1533	subtractBed	intrn	18766	19773	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	18766	19773	1683	+	.	.
scaffold1533	subtractBed	intrn	20327	20939	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	20327	20939	1028	+	.	.
scaffold1533	subtractBed	intrn	21834	22215	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	21834	22215	629	+	.	.
scaffold1533	subtractBed	intrn	26594	26886	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	26594	26886	388	+	.	.
scaffold1533	subtractBed	intrn	38511	38579	.	+	.	Parent=CGI_10012864;
	scaffold1533	TRF	Tandem_Repeat	38511	38579	122	+	.	.
scaffold1533	subtractBed	intrn	55469	55727	.	+	.	Parent=CGI_10012865;
	scaffold1533	TRF	Tandem_Repeat	55469	55727	133	+	.	.
scaffold1533	subtractBed	intrn	55597	55737	.	+	.	Parent=CGI_10012865;
	scaffold1533	TRF	Tandem_Repeat	55597	55737	264	+	.	.
scaffold1533	subtractBed	intrn	67574	68312	.	+	.	Parent=CGI_10012866;
	scaffold1533	TRF	Tandem_Repeat	67574	68312	1214	+	.	.
scaffold1533	subtractBed	intrn	75430	76124	.	+	.	Parent=CGI_10012866;
	scaffold1533	TRF	Tandem_Repeat	75430	76124	1147	+	.	.
scaffold1533	subtractBed	intrn	75430	76124	.	+	.	Parent=CGI_10012866;
	scaffold1533	TRF	Tandem_Repeat	75430	76124	1147	+	.	.
scaffold1533	subtractBed	intrn	94262	94432	.	+	.	Parent=CGI_10012868;
	scaffold1533	WUBlastX	DNA_Harbinger	94262	94432	78	+	.	.
scaffold1533	subtractBed	intrn	95240	95596	.	+	.	Parent=CGI_10012868;
	scaffold1533	WUBlastX	LINE_CR1-L2	95240	95596	20	-	.	.
scaffold1533	subtractBed	intrn	94238	94450	.	+	.	Parent=CGI_10012868;
	scaffold1533	WUBlastX	DNA_Harbinger	94238	94450	76	+	.	.
scaffold1533	subtractBed	intrn	152446	152493	.	+	.	Parent=CGI_10012871;
	scaffold1533	TRF	Tandem_Repeat	152446	152493	51	+	.	.
scaffold1533	subtractBed	intrn	152448	152494	.	+	.	Parent=CGI_10012871;
	scaffold1533	TRF	Tandem_Repeat	152448	152494	53	+	.	.
scaffold1533	subtractBed	intrn	168520	168552	.	-	.	Parent=CGI_10012872;
	scaffold1533	TRF	Tandem_Repeat	168520	168552	57	+	.	.
scaffold1533	subtractBed	intrn	215570	215633	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	215570	215633	87	+	.	.
scaffold1533	subtractBed	intrn	215750	215793	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	215750	215793	54	+	.	.
scaffold1533	subtractBed	intrn	217679	217742	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	217679	217742	87	+	.	.
scaffold1533	subtractBed	intrn	219775	219838	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	219775	219838	87	+	.	.
scaffold1533	subtractBed	intrn	221871	221934	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	221871	221934	87	+	.	.
scaffold1533	subtractBed	intrn	223967	224030	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	223967	224030	87	+	.	.
scaffold1533	subtractBed	intrn	226063	226126	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	226063	226126	87	+	.	.
scaffold1533	subtractBed	intrn	226243	226286	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	226243	226286	54	+	.	.
scaffold1533	subtractBed	intrn	226403	226458	.	+	.	Parent=CGI_10012876;
	scaffold1533	TRF	Tandem_Repeat	226403	226458	94	+	.	.
scaffold1533	subtractBed	intrn	245869	246073	.	+	.	Parent=CGI_10012877;
	scaffold1533	TRF	Tandem_Repeat	245869	246073	241	+	.	.
scaffold1533	subtractBed	intrn	247790	247841	.	+	.	Parent=CGI_10012877;
	scaffold1533	TRF	Tandem_Repeat	247790	247841	50	+	.	.
scaffold1533	subtractBed	intrn	253199	253242	.	+	.	Parent=CGI_10012877;
	scaffold1533	TRF	Tandem_Repeat	253199	253242	88	+	.	.
scaffold1533	subtractBed	intrn	294790	294828	.	+	.	Parent=CGI_10012879;
	scaffold1533	TRF	Tandem_Repeat	294790	294828	69	+	.	.
scaffold1536	subtractBed	intrn	70098	70188	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	70098	70188	123	+	.	.
scaffold1536	subtractBed	intrn	74250	75329	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	74250	75329	1786	+	.	.
scaffold1536	subtractBed	intrn	78821	78853	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	78821	78853	50	+	.	.
scaffold1536	subtractBed	intrn	79974	80505	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	79974	80505	603	+	.	.
scaffold1536	subtractBed	intrn	82474	83420	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	82474	83420	1390	+	.	.
scaffold1536	subtractBed	intrn	84834	84873	.	+	.	Parent=CGI_10004415;
	scaffold1536	TRF	Tandem_Repeat	84834	84873	62	+	.	.
scaffold1537	subtractBed	intrn	8581	8742	.	+	.	Parent=CGI_10001150;
	scaffold1537	WUBlastX	LINE_Penelope	8581	8742	88	+	.	.
scaffold1537	subtractBed	intrn	8581	8853	.	+	.	Parent=CGI_10001150;
	scaffold1537	WUBlastX	LINE_Penelope	8581	8853	78	+	.	.
scaffold1537	subtractBed	intrn	8454	8597	.	+	.	Parent=CGI_10001150;
	scaffold1537	WUBlastX	LINE_Penelope	8454	8597	20	+	.	.
scaffold1537	subtractBed	intrn	9039	9095	.	+	.	Parent=CGI_10001150;
	scaffold1537	WUBlastX	LINE_Penelope	9039	9095	36	+	.	.
scaffold154	subtractBed	intrn	36330	36357	.	-	.	Parent=CGI_10004830;
	scaffold154	TRF	Tandem_Repeat	36330	36357	56	+	.	.
scaffold154	subtractBed	intrn	36537	36624	.	-	.	Parent=CGI_10004830;
	scaffold154	TRF	Tandem_Repeat	36537	36624	108	+	.	.
scaffold154	subtractBed	intrn	49590	49633	.	+	.	Parent=CGI_10004832;
	scaffold154	TRF	Tandem_Repeat	49590	49633	88	+	.	.
scaffold154	subtractBed	intrn	50822	50863	.	+	.	Parent=CGI_10004832;
	scaffold154	TRF	Tandem_Repeat	50822	50863	59	+	.	.
scaffold154	subtractBed	intrn	51036	51887	.	+	.	Parent=CGI_10004832;
	scaffold154	TRF	Tandem_Repeat	51036	51887	1510	+	.	.
scaffold154	subtractBed	intrn	56481	56666	.	-	.	Parent=CGI_10004833;
	scaffold154	WUBlastX	DNA_Harbinger	56481	56666	25	-	.	.
scaffold154	subtractBed	intrn	61506	61543	.	-	.	Parent=CGI_10004833;
	scaffold154	TRF	Tandem_Repeat	61506	61543	76	+	.	.
scaffold154	subtractBed	intrn	61633	61660	.	-	.	Parent=CGI_10004833;
	scaffold154	TRF	Tandem_Repeat	61633	61660	56	+	.	.
scaffold154	subtractBed	intrn	74700	75709	.	+	.	Parent=CGI_10004834;
	scaffold154	TRF	Tandem_Repeat	74700	75709	1389	+	.	.
scaffold154	subtractBed	intrn	92073	92115	.	-	.	Parent=CGI_10004835;
	scaffold154	TRF	Tandem_Repeat	92073	92115	50	+	.	.
scaffold154	subtractBed	intrn	92073	92115	.	-	.	Parent=CGI_10004835;
	scaffold154	TRF	Tandem_Repeat	92073	92115	59	+	.	.
scaffold154	subtractBed	intrn	93568	93645	.	-	.	Parent=CGI_10004835;
	scaffold154	TRF	Tandem_Repeat	93568	93645	138	+	.	.
scaffold1541	subtractBed	intrn	22943	22969	.	+	.	Parent=CGI_10017876;
	scaffold1541	TRF	Tandem_Repeat	22943	22969	54	+	.	.
scaffold1541	subtractBed	intrn	34719	35621	.	+	.	Parent=CGI_10017876;
	scaffold1541	WUBlastX	DNA_TcMar-Tc1	34719	35621	252	-	.	.
scaffold1541	subtractBed	intrn	47300	47335	.	-	.	Parent=CGI_10017878;
	scaffold1541	TRF	Tandem_Repeat	47300	47335	72	+	.	.
scaffold1541	subtractBed	intrn	67208	67263	.	-	.	Parent=CGI_10017880;
	scaffold1541	TRF	Tandem_Repeat	67208	67263	112	+	.	.
scaffold1541	subtractBed	intrn	69705	69779	.	-	.	Parent=CGI_10017880;
	scaffold1541	TRF	Tandem_Repeat	69705	69779	141	+	.	.
scaffold1541	subtractBed	intrn	81439	81464	.	-	.	Parent=CGI_10017881;
	scaffold1541	TRF	Tandem_Repeat	81439	81464	52	+	.	.
scaffold1541	subtractBed	intrn	81467	81595	.	-	.	Parent=CGI_10017881;
	scaffold1541	TRF	Tandem_Repeat	81467	81595	124	+	.	.
scaffold1541	subtractBed	intrn	81474	81575	.	-	.	Parent=CGI_10017881;
	scaffold1541	TRF	Tandem_Repeat	81474	81575	64	+	.	.
scaffold1541	subtractBed	intrn	111391	111438	.	+	.	Parent=CGI_10017882;
	scaffold1541	TRF	Tandem_Repeat	111391	111438	96	+	.	.
scaffold1541	subtractBed	intrn	142186	142355	.	-	.	Parent=CGI_10017884;
	scaffold1541	TRF	Tandem_Repeat	142186	142355	73	+	.	.
scaffold1541	subtractBed	intrn	142198	142262	.	-	.	Parent=CGI_10017884;
	scaffold1541	TRF	Tandem_Repeat	142198	142262	53	+	.	.
scaffold1541	subtractBed	intrn	142243	142357	.	-	.	Parent=CGI_10017884;
	scaffold1541	TRF	Tandem_Repeat	142243	142357	97	+	.	.
scaffold1541	subtractBed	intrn	205490	205822	.	-	.	Parent=CGI_10017888;
	scaffold1541	TRF	Tandem_Repeat	205490	205822	330	+	.	.
scaffold1541	subtractBed	intrn	205492	205735	.	-	.	Parent=CGI_10017888;
	scaffold1541	TRF	Tandem_Repeat	205492	205735	245	+	.	.
scaffold1541	subtractBed	intrn	214273	214341	.	-	.	Parent=CGI_10017888;
	scaffold1541	TRF	Tandem_Repeat	214273	214341	138	+	.	.
scaffold1541	subtractBed	intrn	217111	217210	.	-	.	Parent=CGI_10017888;
	scaffold1541	TRF	Tandem_Repeat	217111	217210	119	+	.	.
scaffold1541	subtractBed	intrn	228325	228362	.	-	.	Parent=CGI_10017888;
	scaffold1541	TRF	Tandem_Repeat	228325	228362	76	+	.	.
scaffold1541	subtractBed	intrn	214273	214341	.	+	.	Parent=CGI_10017889;
	scaffold1541	TRF	Tandem_Repeat	214273	214341	138	+	.	.
scaffold1541	subtractBed	intrn	217111	217210	.	+	.	Parent=CGI_10017889;
	scaffold1541	TRF	Tandem_Repeat	217111	217210	119	+	.	.
scaffold1541	subtractBed	intrn	293044	293076	.	+	.	Parent=CGI_10017892;
	scaffold1541	TRF	Tandem_Repeat	293044	293076	66	+	.	.
scaffold1541	subtractBed	intrn	295154	295202	.	+	.	Parent=CGI_10017892;
	scaffold1541	TRF	Tandem_Repeat	295154	295202	98	+	.	.
scaffold1541	subtractBed	intrn	295345	295423	.	+	.	Parent=CGI_10017892;
	scaffold1541	TRF	Tandem_Repeat	295345	295423	151	+	.	.
scaffold1541	subtractBed	intrn	308740	308802	.	+	.	Parent=CGI_10017893;
	scaffold1541	TRF	Tandem_Repeat	308740	308802	117	+	.	.
scaffold1541	subtractBed	intrn	331626	331683	.	+	.	Parent=CGI_10017895;
	scaffold1541	TRF	Tandem_Repeat	331626	331683	116	+	.	.
scaffold1541	subtractBed	intrn	338891	339055	.	+	.	Parent=CGI_10017895;
	scaffold1541	WUBlastX	DNA_TcMar-Marin	338891	339055	29	+	.	.
scaffold1541	subtractBed	intrn	339221	339271	.	+	.	Parent=CGI_10017895;
	scaffold1541	WUBlastX	DNA_TcMar-Marin	339221	339271	29	+	.	.
scaffold1541	subtractBed	intrn	339440	339610	.	+	.	Parent=CGI_10017895;
	scaffold1541	WUBlastX	DNA_TcMar-Marin	339440	339610	29	+	.	.
scaffold1541	subtractBed	intrn	342196	342241	.	+	.	Parent=CGI_10017895;
	scaffold1541	TRF	Tandem_Repeat	342196	342241	83	+	.	.
scaffold1541	subtractBed	intrn	343452	343509	.	+	.	Parent=CGI_10017895;
	scaffold1541	TRF	Tandem_Repeat	343452	343509	116	+	.	.
scaffold1541	subtractBed	intrn	345458	345491	.	+	.	Parent=CGI_10017895;
	scaffold1541	TRF	Tandem_Repeat	345458	345491	59	+	.	.
scaffold1541	subtractBed	intrn	375270	375413	.	-	.	Parent=CGI_10017897;
	scaffold1541	WUBlastX	DNA_hAT-Tip100	375270	375413	75	-	.	.
scaffold1541	subtractBed	intrn	446065	446098	.	-	.	Parent=CGI_10017899;
	scaffold1541	TRF	Tandem_Repeat	446065	446098	68	+	.	.
scaffold1541	subtractBed	intrn	446343	446478	.	-	.	Parent=CGI_10017899;
	scaffold1541	TRF	Tandem_Repeat	446343	446478	156	+	.	.
scaffold1541	subtractBed	intrn	446343	446478	.	-	.	Parent=CGI_10017899;
	scaffold1541	TRF	Tandem_Repeat	446343	446478	184	+	.	.
scaffold1541	subtractBed	intrn	447046	447091	.	-	.	Parent=CGI_10017899;
	scaffold1541	TRF	Tandem_Repeat	447046	447091	92	+	.	.
scaffold1541	subtractBed	intrn	470187	470270	.	+	.	Parent=CGI_10017901;
	scaffold1541	WUBlastX	DNA_hAT-Tip100	470187	470270	26	+	.	.
scaffold1543	subtractBed	intrn	13323	13545	.	-	.	Parent=CGI_10003480;
	scaffold1543	TRF	Tandem_Repeat	13323	13577	413	+	.	.
scaffold1543	subtractBed	intrn	70787	70928	.	+	.	Parent=CGI_10003485;
	scaffold1543	TRF	Tandem_Repeat	70787	70928	193	+	.	.
scaffold1543	subtractBed	intrn	71790	71869	.	+	.	Parent=CGI_10003485;
	scaffold1543	TRF	Tandem_Repeat	71790	71869	142	+	.	.
scaffold1544	subtractBed	intrn	2991	3100	.	+	.	Parent=CGI_10001560;
	scaffold1544	TRF	Tandem_Repeat	2991	3100	96	+	.	.
scaffold1544	subtractBed	intrn	2991	3081	.	+	.	Parent=CGI_10001560;
	scaffold1544	TRF	Tandem_Repeat	2991	3081	98	+	.	.
scaffold1546	subtractBed	intrn	54304	54446	.	-	.	Parent=CGI_10010750;
	scaffold1546	TRF	Tandem_Repeat	54304	54446	259	+	.	.
scaffold1546	subtractBed	intrn	72990	73036	.	+	.	Parent=CGI_10010751;
	scaffold1546	TRF	Tandem_Repeat	72990	73036	60	+	.	.
scaffold1546	subtractBed	intrn	72997	73047	.	+	.	Parent=CGI_10010751;
	scaffold1546	TRF	Tandem_Repeat	72997	73047	57	+	.	.
scaffold1546	subtractBed	intrn	73248	74175	.	+	.	Parent=CGI_10010751;
	scaffold1546	TRF	Tandem_Repeat	73248	74175	1271	+	.	.
scaffold1546	subtractBed	intrn	80335	80550	.	+	.	Parent=CGI_10010751;
	scaffold1546	TRF	Tandem_Repeat	80335	80550	380	+	.	.
scaffold1546	subtractBed	intrn	183480	183653	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	183480	183653	99	-	.	.
scaffold1546	subtractBed	intrn	184117	184311	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	184117	184311	79	-	.	.
scaffold1546	subtractBed	intrn	184533	184859	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	184533	184859	111	-	.	.
scaffold1546	subtractBed	intrn	184894	184980	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	184894	184980	22	-	.	.
scaffold1546	subtractBed	intrn	184078	184293	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	184078	184293	58	-	.	.
scaffold1546	subtractBed	intrn	182524	182619	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	182524	182619	49	+	.	.
scaffold1546	subtractBed	intrn	183507	183692	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	183507	183692	26	-	.	.
scaffold1546	subtractBed	intrn	184454	184582	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	184454	184582	70	-	.	.
scaffold1546	subtractBed	intrn	183719	184012	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	183719	184012	115	-	.	.
scaffold1546	subtractBed	intrn	183219	183359	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Kolobok	183219	183359	49	-	.	.
scaffold1546	subtractBed	intrn	186408	186623	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_P	186408	186623	65	-	.	.
scaffold1546	subtractBed	intrn	190968	191624	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_Helitron	190968	191624	43	+	.	.
scaffold1546	subtractBed	intrn	191073	191624	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	RC_Helitron	191073	191624	88	+	.	.
scaffold1546	subtractBed	intrn	191706	197198	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	RC_Helitron	191706	197198	3201	+	.	.
scaffold1546	subtractBed	intrn	196572	197321	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	LINE_L2	196572	197321	22	+	.	.
scaffold1546	subtractBed	intrn	204976	205200	.	+	.	Parent=CGI_10010755;
	scaffold1546	TRF	Tandem_Repeat	204976	205200	140	+	.	.
scaffold1546	subtractBed	intrn	205048	205169	.	+	.	Parent=CGI_10010755;
	scaffold1546	TRF	Tandem_Repeat	205048	205169	118	+	.	.
scaffold1546	subtractBed	intrn	204536	204760	.	+	.	Parent=CGI_10010755;
	scaffold1546	WUBlastX	DNA_TcMar-Tc1	204536	204760	28	-	.	.
scaffold1546	subtractBed	intrn	262370	262429	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	262370	262429	61	+	.	.
scaffold1546	subtractBed	intrn	262370	262446	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	262370	262446	57	+	.	.
scaffold1546	subtractBed	intrn	262370	262441	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	262370	262441	72	+	.	.
scaffold1546	subtractBed	intrn	265071	265117	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	265071	265117	94	+	.	.
scaffold1546	subtractBed	intrn	267066	267105	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	267066	267105	53	+	.	.
scaffold1546	subtractBed	intrn	268624	269032	.	-	.	Parent=CGI_10010756;
	scaffold1546	TRF	Tandem_Repeat	268624	269032	250	+	.	.
scaffold1549	subtractBed	intrn	8731	8762	.	-	.	Parent=CGI_10002845;
	scaffold1549	TRF	Tandem_Repeat	8731	8762	64	+	.	.
scaffold1549	subtractBed	intrn	11546	11581	.	-	.	Parent=CGI_10002845;
	scaffold1549	TRF	Tandem_Repeat	11546	11581	72	+	.	.
scaffold1549	subtractBed	intrn	7825	8334	.	-	.	Parent=CGI_10002845;
	scaffold1549	WUBlastX	LINE_L1-Tx1	7825	8334	96	+	.	.
scaffold1549	subtractBed	intrn	8336	8719	.	-	.	Parent=CGI_10002845;
	scaffold1549	WUBlastX	LINE_L1-Tx1	8336	8719	33	+	.	.
scaffold1551	subtractBed	intrn	55022	55159	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Gypsy-Cigr	55022	55159	84	-	.	.
scaffold1551	subtractBed	intrn	54977	55156	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Gypsy-Cigr	54977	55156	71	-	.	.
scaffold1551	subtractBed	intrn	58540	59203	.	+	.	Parent=CGI_10011471;
	scaffold1551	TRF	Tandem_Repeat	58540	59203	1031	+	.	.
scaffold1551	subtractBed	intrn	61872	62195	.	+	.	Parent=CGI_10011471;
	scaffold1551	TRF	Tandem_Repeat	61872	62195	447	+	.	.
scaffold1551	subtractBed	intrn	61921	62189	.	+	.	Parent=CGI_10011471;
	scaffold1551	TRF	Tandem_Repeat	61921	62189	367	+	.	.
scaffold1551	subtractBed	intrn	66238	66273	.	+	.	Parent=CGI_10011471;
	scaffold1551	TRF	Tandem_Repeat	66238	66273	72	+	.	.
scaffold1551	subtractBed	intrn	72975	73748	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	72975	73748	93	+	.	.
scaffold1551	subtractBed	intrn	74022	74393	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	74022	74393	200	+	.	.
scaffold1551	subtractBed	intrn	74388	74726	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	74388	74726	232	+	.	.
scaffold1551	subtractBed	intrn	75232	76029	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	75232	76029	280	+	.	.
scaffold1551	subtractBed	intrn	74744	75319	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	74744	75319	279	+	.	.
scaffold1551	subtractBed	intrn	73714	74142	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	73714	74142	165	+	.	.
scaffold1551	subtractBed	intrn	72708	73511	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	72708	73511	147	+	.	.
scaffold1551	subtractBed	intrn	76018	76131	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	76018	76131	24	+	.	.
scaffold1551	subtractBed	intrn	72864	73511	.	+	.	Parent=CGI_10011471;
	scaffold1551	WUBlastX	LTR_Ngaro	72864	73511	199	+	.	.
scaffold1551	subtractBed	intrn	84106	84141	.	+	.	Parent=CGI_10011471;
	scaffold1551	TRF	Tandem_Repeat	84106	84141	63	+	.	.
scaffold1551	subtractBed	intrn	133243	133284	.	+	.	Parent=CGI_10011475;
	scaffold1551	TRF	Tandem_Repeat	133243	133284	84	+	.	.
scaffold1551	subtractBed	intrn	156021	156118	.	+	.	Parent=CGI_10011477;
	scaffold1551	TRF	Tandem_Repeat	156021	156118	189	+	.	.
scaffold1551	subtractBed	intrn	214123	214147	.	-	.	Parent=CGI_10011480;
	scaffold1551	TRF	Tandem_Repeat	214123	214147	50	+	.	.
scaffold1551	subtractBed	intrn	215590	215630	.	-	.	Parent=CGI_10011480;
	scaffold1551	TRF	Tandem_Repeat	215590	215630	82	+	.	.
scaffold1551	subtractBed	intrn	243943	244810	.	-	.	Parent=CGI_10011482;
	scaffold1551	TRF	Tandem_Repeat	243943	244810	1164	+	.	.
scaffold1551	subtractBed	intrn	245696	245773	.	-	.	Parent=CGI_10011482;
	scaffold1551	TRF	Tandem_Repeat	245696	245773	156	+	.	.
scaffold1551	subtractBed	intrn	286102	286139	.	+	.	Parent=CGI_10011483;
	scaffold1551	TRF	Tandem_Repeat	286102	286139	76	+	.	.
scaffold1553	subtractBed	intrn	3727	3843	.	+	.	Parent=CGI_10005358;
	scaffold1553	TRF	Tandem_Repeat	3727	3843	95	+	.	.
scaffold1553	subtractBed	intrn	20953	20988	.	+	.	Parent=CGI_10005358;
	scaffold1553	TRF	Tandem_Repeat	20953	20988	72	+	.	.
scaffold1553	subtractBed	intrn	24834	24882	.	+	.	Parent=CGI_10005358;
	scaffold1553	TRF	Tandem_Repeat	24834	24882	98	+	.	.
scaffold1553	subtractBed	intrn	20953	20988	.	-	.	Parent=CGI_10005359;
	scaffold1553	TRF	Tandem_Repeat	20953	20988	72	+	.	.
scaffold1553	subtractBed	intrn	24834	24882	.	-	.	Parent=CGI_10005359;
	scaffold1553	TRF	Tandem_Repeat	24834	24882	98	+	.	.
scaffold1553	subtractBed	intrn	74412	74414	.	-	.	Parent=CGI_10005363;
	scaffold1553	WUBlastX	DNA_IS4EU	74412	74723	51	-	.	.
scaffold1553	subtractBed	intrn	84007	84064	.	+	.	Parent=CGI_10005365;
	scaffold1553	TRF	Tandem_Repeat	84007	84064	55	+	.	.
scaffold1554	subtractBed	intrn	7376	7883	.	+	.	Parent=CGI_10017354;
	scaffold1554	TRF	Tandem_Repeat	7376	7883	404	+	.	.
scaffold1554	subtractBed	intrn	4700	6520	.	+	.	Parent=CGI_10017354;
	scaffold1554	WUBlastX	LTR_Gypsy	4700	6520	1113	-	.	.
scaffold1554	subtractBed	intrn	6254	6574	.	+	.	Parent=CGI_10017354;
	scaffold1554	WUBlastX	LTR_Gypsy	6254	6574	38	-	.	.
scaffold1554	subtractBed	intrn	6455	6607	.	+	.	Parent=CGI_10017354;
	scaffold1554	WUBlastX	LTR_Gypsy	6455	6607	23	-	.	.
scaffold1554	subtractBed	intrn	11938	11976	.	+	.	Parent=CGI_10017354;
	scaffold1554	TRF	Tandem_Repeat	11938	11976	60	+	.	.
scaffold1554	subtractBed	intrn	11942	11985	.	+	.	Parent=CGI_10017354;
	scaffold1554	TRF	Tandem_Repeat	11942	11985	52	+	.	.
scaffold1554	subtractBed	intrn	20250	20308	.	+	.	Parent=CGI_10017354;
	scaffold1554	TRF	Tandem_Repeat	20250	20308	118	+	.	.
scaffold1554	subtractBed	intrn	29964	30722	.	-	.	Parent=CGI_10017355;
	scaffold1554	TRF	Tandem_Repeat	29964	30722	1167	+	.	.
scaffold1554	subtractBed	intrn	30204	30644	.	-	.	Parent=CGI_10017355;
	scaffold1554	TRF	Tandem_Repeat	30204	30644	98	+	.	.
scaffold1554	subtractBed	intrn	55373	55843	.	-	.	Parent=CGI_10017356;
	scaffold1554	WUBlastX	DNA_Kolobok-Hyd	55373	55843	44	-	.	.
scaffold1554	subtractBed	intrn	55490	55843	.	-	.	Parent=CGI_10017356;
	scaffold1554	WUBlastX	DNA_Kolobok-Hyd	55490	55843	49	-	.	.
scaffold1554	subtractBed	intrn	56930	57000	.	-	.	Parent=CGI_10017356;
	scaffold1554	TRF	Tandem_Repeat	56930	57000	142	+	.	.
scaffold1554	subtractBed	intrn	56677	56698	.	-	.	Parent=CGI_10017356;
	scaffold1554	WUBlastX	DNA_Kolobok-Hyd	56561	56698	30	-	.	.
scaffold1554	subtractBed	intrn	94719	94748	.	-	.	Parent=CGI_10017359;
	scaffold1554	TRF	Tandem_Repeat	94719	94748	60	+	.	.
scaffold1554	subtractBed	intrn	109328	109497	.	+	.	Parent=CGI_10017360;
	scaffold1554	TRF	Tandem_Repeat	109328	109497	202	+	.	.
scaffold1554	subtractBed	intrn	145148	145396	.	+	.	Parent=CGI_10017362;
	scaffold1554	TRF	Tandem_Repeat	145148	145396	171	+	.	.
scaffold1554	subtractBed	intrn	145199	145690	.	+	.	Parent=CGI_10017362;
	scaffold1554	TRF	Tandem_Repeat	145199	145690	305	+	.	.
scaffold1554	subtractBed	intrn	145477	145733	.	+	.	Parent=CGI_10017362;
	scaffold1554	TRF	Tandem_Repeat	145477	145733	187	+	.	.
scaffold1554	subtractBed	intrn	151819	151897	.	-	.	Parent=CGI_10017363;
	scaffold1554	TRF	Tandem_Repeat	151819	151897	135	+	.	.
scaffold1554	subtractBed	intrn	152672	152762	.	-	.	Parent=CGI_10017363;
	scaffold1554	TRF	Tandem_Repeat	152672	152762	83	+	.	.
scaffold1554	subtractBed	intrn	326693	326936	.	-	.	Parent=CGI_10017369;
	scaffold1554	TRF	Tandem_Repeat	326693	326936	197	+	.	.
scaffold1554	subtractBed	intrn	339014	339054	.	-	.	Parent=CGI_10017369;
	scaffold1554	TRF	Tandem_Repeat	339014	339054	82	+	.	.
scaffold1554	subtractBed	intrn	406700	406733	.	+	.	Parent=CGI_10017370;
	scaffold1554	TRF	Tandem_Repeat	406700	406733	52	+	.	.
scaffold1554	subtractBed	intrn	417481	417544	.	+	.	Parent=CGI_10017370;
	scaffold1554	TRF	Tandem_Repeat	417481	417544	121	+	.	.
scaffold1554	subtractBed	intrn	418887	419104	.	+	.	Parent=CGI_10017370;
	scaffold1554	TRF	Tandem_Repeat	418887	419104	391	+	.	.
scaffold1554	subtractBed	intrn	422315	422518	.	+	.	Parent=CGI_10017370;
	scaffold1554	TRF	Tandem_Repeat	422315	422518	125	+	.	.
scaffold1554	subtractBed	intrn	423931	423956	.	+	.	Parent=CGI_10017370;
	scaffold1554	TRF	Tandem_Repeat	423931	423956	52	+	.	.
scaffold1554	subtractBed	intrn	486084	486084	.	+	.	Parent=CGI_10017375;
	scaffold1554	WUBlastX	LINE_L2	486084	486398	63	+	.	.
scaffold1554	subtractBed	intrn	486039	486084	.	+	.	Parent=CGI_10017375;
	scaffold1554	WUBlastX	LINE_L1	486039	486419	61	+	.	.
scaffold1556	subtractBed	intrn	70299	70333	.	-	.	Parent=CGI_10010472;
	scaffold1556	TRF	Tandem_Repeat	70299	70333	70	+	.	.
scaffold1556	subtractBed	intrn	101369	101746	.	-	.	Parent=CGI_10010473;
	scaffold1556	WUBlastX	LINE_RTE-X	101369	101746	53	-	.	.
scaffold1556	subtractBed	intrn	214457	214518	.	-	.	Parent=CGI_10010476;
	scaffold1556	TRF	Tandem_Repeat	214457	214518	97	+	.	.
scaffold1556	subtractBed	intrn	262882	263391	.	-	.	Parent=CGI_10010478;
	scaffold1556	TRF	Tandem_Repeat	262882	263391	804	+	.	.
scaffold1558	subtractBed	intrn	41713	41853	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1	41713	41853	37	-	.	.
scaffold1558	subtractBed	intrn	40501	40854	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1	40501	40854	100	-	.	.
scaffold1558	subtractBed	intrn	41047	41346	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	41047	41346	34	-	.	.
scaffold1558	subtractBed	intrn	41366	41689	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	41366	41689	22	-	.	.
scaffold1558	subtractBed	intrn	40901	41203	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	40901	41203	33	-	.	.
scaffold1558	subtractBed	intrn	41701	41799	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1	41701	41799	52	-	.	.
scaffold1558	subtractBed	intrn	41203	41463	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	41203	41463	53	-	.	.
scaffold1558	subtractBed	intrn	41203	41394	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	41203	41394	57	-	.	.
scaffold1558	subtractBed	intrn	41102	41233	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1	41102	41233	59	-	.	.
scaffold1558	subtractBed	intrn	41203	41352	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1	41203	41352	65	-	.	.
scaffold1558	subtractBed	intrn	38105	38251	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	38105	38251	49	-	.	.
scaffold1558	subtractBed	intrn	47484	47520	.	-	.	Parent=CGI_10004094;
	scaffold1558	TRF	Tandem_Repeat	47484	47520	74	+	.	.
scaffold1558	subtractBed	intrn	51630	51716	.	-	.	Parent=CGI_10004094;
	scaffold1558	TRF	Tandem_Repeat	51630	51716	129	+	.	.
scaffold1558	subtractBed	intrn	54772	54833	.	-	.	Parent=CGI_10004094;
	scaffold1558	TRF	Tandem_Repeat	54772	54833	124	+	.	.
scaffold1558	subtractBed	intrn	61497	61784	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	61497	61784	59	+	.	.
scaffold1558	subtractBed	intrn	61596	61784	.	-	.	Parent=CGI_10004094;
	scaffold1558	WUBlastX	LINE_L1-Tx1	61596	61784	71	+	.	.
scaffold1559	subtractBed	intrn	18197	18939	.	-	.	Parent=CGI_10004059;
	scaffold1559	TRF	Tandem_Repeat	18197	18939	1037	+	.	.
scaffold1559	subtractBed	intrn	38772	39241	.	+	.	Parent=CGI_10004060;
	scaffold1559	TRF	Tandem_Repeat	38772	39241	841	+	.	.
scaffold1559	subtractBed	intrn	42747	42780	.	+	.	Parent=CGI_10004060;
	scaffold1559	TRF	Tandem_Repeat	42747	42780	68	+	.	.
scaffold156	subtractBed	intrn	4055	4242	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	4055	4242	127	+	.	.
scaffold156	subtractBed	intrn	4055	4592	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	4055	4592	365	+	.	.
scaffold156	subtractBed	intrn	4162	4263	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	4162	4263	50	+	.	.
scaffold156	subtractBed	intrn	4244	4592	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	4244	4592	440	+	.	.
scaffold156	subtractBed	intrn	3959	4301	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	3959	4301	217	+	.	.
scaffold156	subtractBed	intrn	4365	4458	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	4365	4458	50	+	.	.
scaffold156	subtractBed	intrn	5732	6190	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	5732	6190	427	+	.	.
scaffold156	subtractBed	intrn	5791	6181	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	5791	6181	435	+	.	.
scaffold156	subtractBed	intrn	5791	6190	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	5791	6190	431	+	.	.
scaffold156	subtractBed	intrn	7498	7652	.	+	.	Parent=CGI_10026468;
	scaffold156	TRF	Tandem_Repeat	7497	7652	163	+	.	.
scaffold156	subtractBed	intrn	16359	16387	.	+	.	Parent=CGI_10026471;
	scaffold156	TRF	Tandem_Repeat	16359	16387	58	+	.	.
scaffold156	subtractBed	intrn	21737	21781	.	+	.	Parent=CGI_10026471;
	scaffold156	TRF	Tandem_Repeat	21737	21781	72	+	.	.
scaffold156	subtractBed	intrn	25513	25593	.	+	.	Parent=CGI_10026471;
	scaffold156	WUBlastX	LTR_Gypsy	25513	25593	21	+	.	.
scaffold156	subtractBed	intrn	25552	25638	.	+	.	Parent=CGI_10026471;
	scaffold156	WUBlastX	LTR_Gypsy	25552	25638	20	+	.	.
scaffold156	subtractBed	intrn	25322	25495	.	+	.	Parent=CGI_10026471;
	scaffold156	WUBlastX	LTR_Gypsy	25322	25495	44	+	.	.
scaffold156	subtractBed	intrn	52775	53590	.	+	.	Parent=CGI_10026475;
	scaffold156	TRF	Tandem_Repeat	52775	53590	1310	+	.	.
scaffold156	subtractBed	intrn	58597	58854	.	+	.	Parent=CGI_10026475;
	scaffold156	TRF	Tandem_Repeat	58597	58854	358	+	.	.
scaffold156	subtractBed	intrn	59810	60643	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	59810	60643	511	-	.	.
scaffold156	subtractBed	intrn	56116	56754	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	56116	56754	595	-	.	.
scaffold156	subtractBed	intrn	56763	57113	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	56763	57113	367	-	.	.
scaffold156	subtractBed	intrn	60579	61241	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	60579	61241	303	-	.	.
scaffold156	subtractBed	intrn	59305	59772	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	59305	59772	285	-	.	.
scaffold156	subtractBed	intrn	57913	58596	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	57913	58596	516	-	.	.
scaffold156	subtractBed	intrn	59293	59682	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	59293	59682	299	-	.	.
scaffold156	subtractBed	intrn	59675	59803	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	59675	59803	57	-	.	.
scaffold156	subtractBed	intrn	57119	57946	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	57119	57946	495	-	.	.
scaffold156	subtractBed	intrn	61229	61339	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	61229	61339	20	-	.	.
scaffold156	subtractBed	intrn	58985	59308	.	+	.	Parent=CGI_10026475;
	scaffold156	WUBlastX	LTR_Pao	58985	59308	257	-	.	.
scaffold156	subtractBed	intrn	199576	199645	.	-	.	Parent=CGI_10026481;
	scaffold156	TRF	Tandem_Repeat	199576	199645	131	+	.	.
scaffold156	subtractBed	intrn	200623	200651	.	-	.	Parent=CGI_10026481;
	scaffold156	TRF	Tandem_Repeat	200623	200651	58	+	.	.
scaffold156	subtractBed	intrn	222952	223231	.	+	.	Parent=CGI_10026483;
	scaffold156	TRF	Tandem_Repeat	222952	223231	305	+	.	.
scaffold156	subtractBed	intrn	238845	239093	.	+	.	Parent=CGI_10026484;
	scaffold156	WUBlastX	DNA_hAT-Tip100	238845	239093	77	-	.	.
scaffold156	subtractBed	intrn	238881	239132	.	+	.	Parent=CGI_10026484;
	scaffold156	WUBlastX	DNA_hAT-Tip100	238881	239132	67	-	.	.
scaffold156	subtractBed	intrn	240837	241118	.	+	.	Parent=CGI_10026484;
	scaffold156	WUBlastX	LINE_R2-Hero	240837	241619	313	+	.	.
scaffold156	subtractBed	intrn	238869	239075	.	+	.	Parent=CGI_10026484;
	scaffold156	WUBlastX	DNA_hAT-Tip100	238869	239075	94	-	.	.
scaffold156	subtractBed	intrn	241204	241619	.	+	.	Parent=CGI_10026484;
	scaffold156	WUBlastX	LINE_R2-Hero	240837	241619	313	+	.	.
scaffold156	subtractBed	intrn	241204	241619	.	-	.	Parent=CGI_10026485;
	scaffold156	WUBlastX	LINE_R2-Hero	240837	241619	313	+	.	.
scaffold156	subtractBed	intrn	245627	247233	.	-	.	Parent=CGI_10026485;
	scaffold156	TRF	Tandem_Repeat	245627	247233	2586	+	.	.
scaffold156	subtractBed	intrn	245627	247233	.	+	.	Parent=CGI_10026486;
	scaffold156	TRF	Tandem_Repeat	245627	247233	2586	+	.	.
scaffold156	subtractBed	intrn	264617	264667	.	+	.	Parent=CGI_10026488;
	scaffold156	TRF	Tandem_Repeat	264617	264667	102	+	.	.
scaffold156	subtractBed	intrn	265518	265558	.	+	.	Parent=CGI_10026488;
	scaffold156	TRF	Tandem_Repeat	265518	265558	52	+	.	.
scaffold156	subtractBed	intrn	269300	269513	.	+	.	Parent=CGI_10026488;
	scaffold156	TRF	Tandem_Repeat	269300	269513	329	+	.	.
scaffold156	subtractBed	intrn	274820	275104	.	-	.	Parent=CGI_10026489;
	scaffold156	WUBlastX	LINE_CR1-L2	274820	275104	50	+	.	.
scaffold156	subtractBed	intrn	274507	274830	.	-	.	Parent=CGI_10026489;
	scaffold156	WUBlastX	LINE_L2	274507	274830	68	+	.	.
scaffold156	subtractBed	intrn	275181	275453	.	-	.	Parent=CGI_10026489;
	scaffold156	WUBlastX	LINE_L2	275181	275453	37	+	.	.
scaffold156	subtractBed	intrn	274820	275056	.	-	.	Parent=CGI_10026489;
	scaffold156	WUBlastX	LINE_L2	274820	275056	64	+	.	.
scaffold156	subtractBed	intrn	295089	296171	.	-	.	Parent=CGI_10026491;
	scaffold156	TRF	Tandem_Repeat	295089	296171	1384	+	.	.
scaffold156	subtractBed	intrn	298115	298148	.	-	.	Parent=CGI_10026491;
	scaffold156	TRF	Tandem_Repeat	298115	298148	52	+	.	.
scaffold156	subtractBed	intrn	303352	303654	.	-	.	Parent=CGI_10026492;
	scaffold156	WUBlastX	DNA_IS4EU	303352	303654	77	-	.	.
scaffold156	subtractBed	intrn	328012	328179	.	+	.	Parent=CGI_10026496;
	scaffold156	WUBlastX	LINE_RTE-X	328012	328179	51	-	.	.
scaffold156	subtractBed	intrn	328012	328224	.	+	.	Parent=CGI_10026496;
	scaffold156	WUBlastX	LINE_RTE-X	328012	328224	33	-	.	.
scaffold156	subtractBed	intrn	327888	328073	.	+	.	Parent=CGI_10026496;
	scaffold156	WUBlastX	LINE_RTE-X	327888	328073	56	-	.	.
scaffold156	subtractBed	intrn	331580	331609	.	+	.	Parent=CGI_10026496;
	scaffold156	TRF	Tandem_Repeat	331580	331609	51	+	.	.
scaffold156	subtractBed	intrn	333086	333499	.	+	.	Parent=CGI_10026496;
	scaffold156	WUBlastX	LINE_R2-Hero	333086	333499	350	-	.	.
scaffold156	subtractBed	intrn	408882	408966	.	-	.	Parent=CGI_10026499;
	scaffold156	TRF	Tandem_Repeat	408882	408966	152	+	.	.
scaffold156	subtractBed	intrn	409055	409113	.	-	.	Parent=CGI_10026499;
	scaffold156	TRF	Tandem_Repeat	409055	409113	118	+	.	.
scaffold156	subtractBed	intrn	409338	410315	.	-	.	Parent=CGI_10026499;
	scaffold156	TRF	Tandem_Repeat	409338	410315	1442	+	.	.
scaffold156	subtractBed	intrn	424755	424966	.	-	.	Parent=CGI_10026499;
	scaffold156	TRF	Tandem_Repeat	424755	424966	352	+	.	.
scaffold156	subtractBed	intrn	425567	425736	.	-	.	Parent=CGI_10026499;
	scaffold156	TRF	Tandem_Repeat	425567	425736	184	+	.	.
scaffold156	subtractBed	intrn	450400	450452	.	-	.	Parent=CGI_10026501;
	scaffold156	TRF	Tandem_Repeat	450400	450452	106	+	.	.
scaffold156	subtractBed	intrn	469871	470023	.	+	.	Parent=CGI_10026503;
	scaffold156	TRF	Tandem_Repeat	469871	470023	126	+	.	.
scaffold156	subtractBed	intrn	470317	470455	.	+	.	Parent=CGI_10026503;
	scaffold156	TRF	Tandem_Repeat	470317	470455	150	+	.	.
scaffold156	subtractBed	intrn	471907	471941	.	+	.	Parent=CGI_10026503;
	scaffold156	TRF	Tandem_Repeat	471907	471941	52	+	.	.
scaffold156	subtractBed	intrn	485916	485967	.	-	.	Parent=CGI_10026504;
	scaffold156	TRF	Tandem_Repeat	485916	485967	104	+	.	.
scaffold156	subtractBed	intrn	493656	493695	.	-	.	Parent=CGI_10026504;
	scaffold156	TRF	Tandem_Repeat	493656	493695	80	+	.	.
scaffold156	subtractBed	intrn	514210	514895	.	-	.	Parent=CGI_10026506;
	scaffold156	TRF	Tandem_Repeat	514210	514895	1232	+	.	.
scaffold156	subtractBed	intrn	514906	514940	.	-	.	Parent=CGI_10026506;
	scaffold156	TRF	Tandem_Repeat	514906	514940	52	+	.	.
scaffold156	subtractBed	intrn	534159	534189	.	+	.	Parent=CGI_10026507;
	scaffold156	TRF	Tandem_Repeat	534159	534189	62	+	.	.
scaffold156	subtractBed	intrn	539123	539212	.	+	.	Parent=CGI_10026507;
	scaffold156	TRF	Tandem_Repeat	539123	539212	71	+	.	.
scaffold156	subtractBed	intrn	539436	539531	.	+	.	Parent=CGI_10026507;
	scaffold156	TRF	Tandem_Repeat	539436	539531	81	+	.	.
scaffold156	subtractBed	intrn	551570	551897	.	-	.	Parent=CGI_10026508;
	scaffold156	TRF	Tandem_Repeat	551570	551912	315	+	.	.
scaffold156	subtractBed	intrn	551518	551897	.	-	.	Parent=CGI_10026508;
	scaffold156	TRF	Tandem_Repeat	551518	551914	322	+	.	.
scaffold156	subtractBed	intrn	551520	551897	.	-	.	Parent=CGI_10026508;
	scaffold156	TRF	Tandem_Repeat	551520	551912	264	+	.	.
scaffold156	subtractBed	intrn	655802	655840	.	+	.	Parent=CGI_10026514;
	scaffold156	TRF	Tandem_Repeat	655802	655840	78	+	.	.
scaffold156	subtractBed	intrn	659234	659266	.	+	.	Parent=CGI_10026514;
	scaffold156	TRF	Tandem_Repeat	659234	659266	66	+	.	.
scaffold156	subtractBed	intrn	655802	655840	.	-	.	Parent=CGI_10026515;
	scaffold156	TRF	Tandem_Repeat	655802	655840	78	+	.	.
scaffold156	subtractBed	intrn	659234	659266	.	-	.	Parent=CGI_10026515;
	scaffold156	TRF	Tandem_Repeat	659234	659266	66	+	.	.
scaffold156	subtractBed	intrn	680176	680594	.	-	.	Parent=CGI_10026516;
	scaffold156	TRF	Tandem_Repeat	680176	680594	608	+	.	.
scaffold156	subtractBed	intrn	688368	688724	.	-	.	Parent=CGI_10026516;
	scaffold156	WUBlastX	DNA_Kolobok-Hyd	688368	688724	79	-	.	.
scaffold156	subtractBed	intrn	689443	689456	.	-	.	Parent=CGI_10026516;
	scaffold156	WUBlastX	DNA_Kolobok-Hyd	689443	689514	22	-	.	.
scaffold156	subtractBed	intrn	688254	688721	.	-	.	Parent=CGI_10026516;
	scaffold156	WUBlastX	DNA_Kolobok-Hyd	688254	688721	76	-	.	.
scaffold156	subtractBed	intrn	688119	688724	.	-	.	Parent=CGI_10026516;
	scaffold156	WUBlastX	DNA_Kolobok-Hyd	688119	688724	52	-	.	.
scaffold156	subtractBed	intrn	687921	688256	.	-	.	Parent=CGI_10026516;
	scaffold156	WUBlastX	DNA_Kolobok-Hyd	687921	688256	51	-	.	.
scaffold156	subtractBed	intrn	730434	730500	.	-	.	Parent=CGI_10026517;
	scaffold156	TRF	Tandem_Repeat	730434	730500	50	+	.	.
scaffold156	subtractBed	intrn	723395	723448	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_CR1-L2	723395	723448	33	+	.	.
scaffold156	subtractBed	intrn	721739	721972	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_L2	721739	721972	49	+	.	.
scaffold156	subtractBed	intrn	723560	723727	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_L2	723560	723727	52	+	.	.
scaffold156	subtractBed	intrn	723726	725780	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_L2	723726	725780	1152	+	.	.
scaffold156	subtractBed	intrn	725782	726705	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_L2	725782	726705	535	+	.	.
scaffold156	subtractBed	intrn	721787	722146	.	-	.	Parent=CGI_10026517;
	scaffold156	WUBlastX	LINE_L2	721787	722146	96	+	.	.
scaffold156	subtractBed	intrn	735764	735799	.	-	.	Parent=CGI_10026517;
	scaffold156	TRF	Tandem_Repeat	735764	735799	54	+	.	.
scaffold156	subtractBed	intrn	815016	816137	.	-	.	Parent=CGI_10026525;
	scaffold156	TRF	Tandem_Repeat	815016	816153	2168	+	.	.
scaffold156	subtractBed	intrn	860452	860507	.	+	.	Parent=CGI_10026527;
	scaffold156	TRF	Tandem_Repeat	860452	860507	112	+	.	.
scaffold156	subtractBed	intrn	862350	862387	.	+	.	Parent=CGI_10026527;
	scaffold156	TRF	Tandem_Repeat	862350	862387	67	+	.	.
scaffold156	subtractBed	intrn	880787	880837	.	-	.	Parent=CGI_10026528;
	scaffold156	TRF	Tandem_Repeat	880787	880837	75	+	.	.
scaffold156	subtractBed	intrn	880787	880837	.	-	.	Parent=CGI_10026528;
	scaffold156	TRF	Tandem_Repeat	880787	880837	84	+	.	.
scaffold156	subtractBed	intrn	881519	881580	.	-	.	Parent=CGI_10026528;
	scaffold156	TRF	Tandem_Repeat	881519	881580	124	+	.	.
scaffold156	subtractBed	intrn	888427	888479	.	-	.	Parent=CGI_10026529;
	scaffold156	TRF	Tandem_Repeat	888427	888479	106	+	.	.
scaffold156	subtractBed	intrn	896019	896063	.	+	.	Parent=CGI_10026530;
	scaffold156	TRF	Tandem_Repeat	896019	896063	72	+	.	.
scaffold156	subtractBed	intrn	920956	921003	.	-	.	Parent=CGI_10026534;
	scaffold156	TRF	Tandem_Repeat	920956	921003	96	+	.	.
scaffold156	subtractBed	intrn	937706	937741	.	+	.	Parent=CGI_10026535;
	scaffold156	TRF	Tandem_Repeat	937706	937741	54	+	.	.
scaffold156	subtractBed	intrn	941652	941686	.	+	.	Parent=CGI_10026535;
	scaffold156	TRF	Tandem_Repeat	941652	941686	70	+	.	.
scaffold156	subtractBed	intrn	949649	949690	.	+	.	Parent=CGI_10026535;
	scaffold156	TRF	Tandem_Repeat	949649	949690	66	+	.	.
scaffold156	subtractBed	intrn	957402	957544	.	+	.	Parent=CGI_10026535;
	scaffold156	TRF	Tandem_Repeat	957402	957544	83	+	.	.
scaffold156	subtractBed	intrn	984011	984038	.	-	.	Parent=CGI_10026536;
	scaffold156	TRF	Tandem_Repeat	984011	984038	56	+	.	.
scaffold156	subtractBed	intrn	1039600	1039666	.	-	.	Parent=CGI_10026538;
	scaffold156	TRF	Tandem_Repeat	1039600	1039666	134	+	.	.
scaffold156	subtractBed	intrn	1042559	1042600	.	-	.	Parent=CGI_10026538;
	scaffold156	TRF	Tandem_Repeat	1042559	1042600	84	+	.	.
scaffold156	subtractBed	intrn	1100449	1101780	.	-	.	Parent=CGI_10026543;
	scaffold156	WUBlastX	LTR_Gypsy	1100449	1101780	536	-	.	.
scaffold156	subtractBed	intrn	1100653	1103382	.	-	.	Parent=CGI_10026543;
	scaffold156	WUBlastX	LTR_Gypsy-Cigr	1100653	1103382	1878	-	.	.
scaffold156	subtractBed	intrn	1103361	1103792	.	-	.	Parent=CGI_10026543;
	scaffold156	WUBlastX	LTR_Gypsy	1103361	1103792	69	-	.	.
scaffold156	subtractBed	intrn	1103526	1103792	.	-	.	Parent=CGI_10026543;
	scaffold156	WUBlastX	LTR_Gypsy	1103526	1103792	80	-	.	.
scaffold156	subtractBed	intrn	1112150	1112193	.	+	.	Parent=CGI_10026544;
	scaffold156	TRF	Tandem_Repeat	1112150	1112193	88	+	.	.
scaffold1560	subtractBed	intrn	5762	5984	.	+	.	Parent=CGI_10009791;
	scaffold1560	TRF	Tandem_Repeat	5762	5984	164	+	.	.
scaffold1560	subtractBed	intrn	5793	5980	.	+	.	Parent=CGI_10009791;
	scaffold1560	TRF	Tandem_Repeat	5793	5980	184	+	.	.
scaffold1560	subtractBed	intrn	36088	36128	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	36088	36128	82	+	.	.
scaffold1560	subtractBed	intrn	39556	39596	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	39556	39596	64	+	.	.
scaffold1560	subtractBed	intrn	46798	46849	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	46798	46849	77	+	.	.
scaffold1560	subtractBed	intrn	61838	61922	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	61838	61922	88	+	.	.
scaffold1560	subtractBed	intrn	65563	65737	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	65563	65737	251	+	.	.
scaffold1560	subtractBed	intrn	66016	66065	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	66016	66065	100	+	.	.
scaffold1560	subtractBed	intrn	68460	68633	.	+	.	Parent=CGI_10009793;
	scaffold1560	TRF	Tandem_Repeat	68460	68633	156	+	.	.
scaffold1560	subtractBed	intrn	171930	171972	.	+	.	Parent=CGI_10009797;
	scaffold1560	TRF	Tandem_Repeat	171930	171972	86	+	.	.
scaffold1560	subtractBed	intrn	176033	176109	.	+	.	Parent=CGI_10009797;
	scaffold1560	TRF	Tandem_Repeat	176033	176109	138	+	.	.
scaffold1560	subtractBed	intrn	200736	200941	.	+	.	Parent=CGI_10009797;
	scaffold1560	TRF	Tandem_Repeat	200736	200941	223	+	.	.
scaffold1560	subtractBed	intrn	201423	201863	.	+	.	Parent=CGI_10009797;
	scaffold1560	TRF	Tandem_Repeat	201423	201863	433	+	.	.
scaffold1560	subtractBed	intrn	201423	201863	.	+	.	Parent=CGI_10009797;
	scaffold1560	TRF	Tandem_Repeat	201423	201863	484	+	.	.
scaffold1560	subtractBed	intrn	212357	212978	.	-	.	Parent=CGI_10009800;
	scaffold1560	TRF	Tandem_Repeat	212335	212978	832	+	.	.
scaffold1560	subtractBed	intrn	212357	212978	.	-	.	Parent=CGI_10009800;
	scaffold1560	TRF	Tandem_Repeat	212335	212978	924	+	.	.
scaffold1561	subtractBed	intrn	13155	13190	.	+	.	Parent=CGI_10005689;
	scaffold1561	TRF	Tandem_Repeat	13155	13190	54	+	.	.
scaffold1561	subtractBed	intrn	14644	14919	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LTR_Ngaro	14644	14919	83	+	.	.
scaffold1561	subtractBed	intrn	18291	19007	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LINE_RTE-X	18291	19007	32	-	.	.
scaffold1561	subtractBed	intrn	18471	19823	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LINE_RTE-X	18471	19823	203	-	.	.
scaffold1561	subtractBed	intrn	16436	17650	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LINE_RTE-X	16436	17650	490	-	.	.
scaffold1561	subtractBed	intrn	17656	18228	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LINE_RTE-X	17656	18228	367	-	.	.
scaffold1561	subtractBed	intrn	17689	18333	.	+	.	Parent=CGI_10005689;
	scaffold1561	WUBlastX	LINE_L2	17689	18333	110	-	.	.
scaffold1561	subtractBed	intrn	67801	67857	.	+	.	Parent=CGI_10005691;
	scaffold1561	TRF	Tandem_Repeat	67801	67857	87	+	.	.
scaffold1561	subtractBed	intrn	96333	96530	.	-	.	Parent=CGI_10005694;
	scaffold1561	TRF	Tandem_Repeat	96333	96530	101	+	.	.
scaffold1561	subtractBed	intrn	97671	97904	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-X	97671	97904	81	-	.	.
scaffold1561	subtractBed	intrn	97746	97982	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-X	97746	97982	58	-	.	.
scaffold1561	subtractBed	intrn	98875	99483	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-X	98875	99483	293	-	.	.
scaffold1561	subtractBed	intrn	98881	99909	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-X	98881	99909	246	-	.	.
scaffold1561	subtractBed	intrn	98806	99525	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-X	98806	99525	260	-	.	.
scaffold1561	subtractBed	intrn	100500	100547	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_CR1	100500	100547	22	-	.	.
scaffold1561	subtractBed	intrn	100353	100454	.	-	.	Parent=CGI_10005694;
	scaffold1561	WUBlastX	LINE_RTE-BovB	100353	100454	21	-	.	.
scaffold1561	subtractBed	intrn	109275	110062	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	109275	110062	779	+	.	.
scaffold1561	subtractBed	intrn	109628	110062	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	109628	110062	550	+	.	.
scaffold1561	subtractBed	intrn	110055	110086	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	110055	110086	64	+	.	.
scaffold1561	subtractBed	intrn	110271	110385	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	110271	110385	72	+	.	.
scaffold1561	subtractBed	intrn	110850	110907	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	110850	110907	116	+	.	.
scaffold1561	subtractBed	intrn	112221	112252	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	112221	112252	64	+	.	.
scaffold1561	subtractBed	intrn	112252	112288	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	112252	112288	74	+	.	.
scaffold1561	subtractBed	intrn	125862	125889	.	-	.	Parent=CGI_10005695;
	scaffold1561	TRF	Tandem_Repeat	125862	125889	56	+	.	.
scaffold1562	subtractBed	intrn	82990	83367	.	-	.	Parent=CGI_10005776;
	scaffold1562	TRF	Tandem_Repeat	82990	83388	397	+	.	.
scaffold1562	subtractBed	intrn	88922	89580	.	-	.	Parent=CGI_10005776;
	scaffold1562	TRF	Tandem_Repeat	88922	89580	964	+	.	.
scaffold1562	subtractBed	intrn	105859	105957	.	-	.	Parent=CGI_10005776;
	scaffold1562	WUBlastX	DNA_TcMar-Marin	105859	105957	65	-	.	.
scaffold1562	subtractBed	intrn	105859	106077	.	-	.	Parent=CGI_10005776;
	scaffold1562	WUBlastX	DNA_TcMar-Marin	105859	106077	48	-	.	.
scaffold1564	subtractBed	intrn	58661	58709	.	+	.	Parent=CGI_10005196;
	scaffold1564	TRF	Tandem_Repeat	58661	58709	98	+	.	.
scaffold1564	subtractBed	intrn	61917	62483	.	+	.	Parent=CGI_10005196;
	scaffold1564	TRF	Tandem_Repeat	61917	62483	551	+	.	.
scaffold1564	subtractBed	intrn	61881	62507	.	+	.	Parent=CGI_10005196;
	scaffold1564	TRF	Tandem_Repeat	61881	62507	649	+	.	.
scaffold1564	subtractBed	intrn	61926	62483	.	+	.	Parent=CGI_10005196;
	scaffold1564	TRF	Tandem_Repeat	61926	62483	740	+	.	.
scaffold1564	subtractBed	intrn	76148	76209	.	+	.	Parent=CGI_10005198;
	scaffold1564	TRF	Tandem_Repeat	76148	76209	124	+	.	.
scaffold1564	subtractBed	intrn	81256	81286	.	-	.	Parent=CGI_10005199;
	scaffold1564	TRF	Tandem_Repeat	81256	81286	62	+	.	.
scaffold1564	subtractBed	intrn	81586	81881	.	-	.	Parent=CGI_10005199;
	scaffold1564	TRF	Tandem_Repeat	81586	81893	386	+	.	.
scaffold1564	subtractBed	intrn	98950	99027	.	-	.	Parent=CGI_10005199;
	scaffold1564	TRF	Tandem_Repeat	98950	99027	93	+	.	.
scaffold1564	subtractBed	intrn	98950	99027	.	-	.	Parent=CGI_10005199;
	scaffold1564	TRF	Tandem_Repeat	98950	99027	93	+	.	.
scaffold1564	subtractBed	intrn	98950	99027	.	-	.	Parent=CGI_10005199;
	scaffold1564	TRF	Tandem_Repeat	98950	99027	93	+	.	.
scaffold1564	subtractBed	intrn	107842	107934	.	-	.	Parent=CGI_10005199;
	scaffold1564	WUBlastX	DNA_hAT-Ac	107842	107934	22	-	.	.
scaffold1564	subtractBed	intrn	107714	107854	.	-	.	Parent=CGI_10005199;
	scaffold1564	WUBlastX	DNA_hAT-Ac	107714	107854	55	-	.	.
scaffold1564	subtractBed	intrn	108129	108248	.	-	.	Parent=CGI_10005199;
	scaffold1564	WUBlastX	DNA_hAT-Ac	108129	108248	45	-	.	.
scaffold1564	subtractBed	intrn	107842	108012	.	-	.	Parent=CGI_10005199;
	scaffold1564	WUBlastX	DNA_hAT-Ac	107842	108012	22	-	.	.
scaffold1565	subtractBed	intrn	7817	7951	.	+	.	Parent=CGI_10000778;
	scaffold1565	WUBlastX	LINE_L1-Tx1	7817	7951	23	-	.	.
scaffold1565	subtractBed	intrn	6825	7412	.	+	.	Parent=CGI_10000778;
	scaffold1565	WUBlastX	LINE_L1-Tx1	6825	7412	29	-	.	.
scaffold1565	subtractBed	intrn	7429	7791	.	+	.	Parent=CGI_10000778;
	scaffold1565	WUBlastX	LINE_L1-Tx1	7429	7791	92	-	.	.
scaffold1565	subtractBed	intrn	6999	7469	.	+	.	Parent=CGI_10000778;
	scaffold1565	WUBlastX	LINE_L1-Tx1	6999	7469	30	-	.	.
scaffold1565	subtractBed	intrn	7522	7845	.	+	.	Parent=CGI_10000778;
	scaffold1565	WUBlastX	LINE_L1-Tx1	7522	7845	73	-	.	.
scaffold1567	subtractBed	intrn	10344	10455	.	-	.	Parent=CGI_10005156;
	scaffold1567	TRF	Tandem_Repeat	10344	10455	154	+	.	.
scaffold1567	subtractBed	intrn	37924	38039	.	+	.	Parent=CGI_10005157;
	scaffold1567	TRF	Tandem_Repeat	37924	38039	67	+	.	.
scaffold1567	subtractBed	intrn	37941	38039	.	+	.	Parent=CGI_10005157;
	scaffold1567	TRF	Tandem_Repeat	37941	38039	75	+	.	.
scaffold1569	subtractBed	intrn	24499	24996	.	-	.	Parent=CGI_10010628;
	scaffold1569	TRF	Tandem_Repeat	24499	24996	690	+	.	.
scaffold1569	subtractBed	intrn	24502	24616	.	-	.	Parent=CGI_10010628;
	scaffold1569	TRF	Tandem_Repeat	24502	24616	179	+	.	.
scaffold1569	subtractBed	intrn	24499	24996	.	-	.	Parent=CGI_10010628;
	scaffold1569	TRF	Tandem_Repeat	24499	24996	736	+	.	.
scaffold1569	subtractBed	intrn	32322	32390	.	-	.	Parent=CGI_10010629;
	scaffold1569	TRF	Tandem_Repeat	32322	32390	138	+	.	.
scaffold1569	subtractBed	intrn	56387	56414	.	-	.	Parent=CGI_10010631;
	scaffold1569	TRF	Tandem_Repeat	56387	56414	56	+	.	.
scaffold1569	subtractBed	intrn	78842	78893	.	+	.	Parent=CGI_10010632;
	scaffold1569	TRF	Tandem_Repeat	78842	78893	68	+	.	.
scaffold1569	subtractBed	intrn	95924	96051	.	+	.	Parent=CGI_10010634;
	scaffold1569	TRF	Tandem_Repeat	95924	96051	127	+	.	.
scaffold1569	subtractBed	intrn	95924	96047	.	+	.	Parent=CGI_10010634;
	scaffold1569	TRF	Tandem_Repeat	95924	96047	185	+	.	.
scaffold1569	subtractBed	intrn	102499	102592	.	+	.	Parent=CGI_10010634;
	scaffold1569	TRF	Tandem_Repeat	102499	102592	61	+	.	.
scaffold1569	subtractBed	intrn	104831	104857	.	+	.	Parent=CGI_10010634;
	scaffold1569	TRF	Tandem_Repeat	104831	104857	54	+	.	.
scaffold1569	subtractBed	intrn	119563	119630	.	-	.	Parent=CGI_10010635;
	scaffold1569	TRF	Tandem_Repeat	119563	119630	127	+	.	.
scaffold1569	subtractBed	intrn	120677	120790	.	-	.	Parent=CGI_10010635;
	scaffold1569	TRF	Tandem_Repeat	120677	120790	137	+	.	.
scaffold1569	subtractBed	intrn	125300	125976	.	-	.	Parent=CGI_10010636;
	scaffold1569	TRF	Tandem_Repeat	125300	125976	1052	+	.	.
scaffold1569	subtractBed	intrn	130563	130595	.	+	.	Parent=CGI_10010637;
	scaffold1569	TRF	Tandem_Repeat	130563	130595	57	+	.	.
scaffold1569	subtractBed	intrn	144129	144170	.	+	.	Parent=CGI_10010637;
	scaffold1569	TRF	Tandem_Repeat	144129	144170	77	+	.	.
scaffold1569	subtractBed	intrn	144129	144170	.	-	.	Parent=CGI_10010639;
	scaffold1569	TRF	Tandem_Repeat	144129	144170	77	+	.	.
scaffold1569	subtractBed	intrn	163860	164086	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	163860	164086	206	+	.	.
scaffold1569	subtractBed	intrn	163810	164080	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	163810	164080	200	+	.	.
scaffold1569	subtractBed	intrn	166980	167048	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	166980	167048	104	+	.	.
scaffold1569	subtractBed	intrn	171315	171364	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	171315	171364	100	+	.	.
scaffold1569	subtractBed	intrn	179139	179179	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	179139	179179	82	+	.	.
scaffold1569	subtractBed	intrn	186985	187821	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	186985	187821	1219	+	.	.
scaffold1569	subtractBed	intrn	187990	188032	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	187990	188032	54	+	.	.
scaffold1569	subtractBed	intrn	192075	192105	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	192075	192105	53	+	.	.
scaffold1569	subtractBed	intrn	192813	193772	.	-	.	Parent=CGI_10010640;
	scaffold1569	TRF	Tandem_Repeat	192813	193772	1291	+	.	.
scaffold1569	subtractBed	intrn	220720	220999	.	-	.	Parent=CGI_10010641;
	scaffold1569	TRF	Tandem_Repeat	220720	220999	389	+	.	.
scaffold1569	subtractBed	intrn	227892	228082	.	+	.	Parent=CGI_10010642;
	scaffold1569	TRF	Tandem_Repeat	227892	228082	145	+	.	.
scaffold1569	subtractBed	intrn	231626	231660	.	+	.	Parent=CGI_10010643;
	scaffold1569	TRF	Tandem_Repeat	231626	231660	52	+	.	.
scaffold1569	subtractBed	intrn	231618	231663	.	+	.	Parent=CGI_10010643;
	scaffold1569	TRF	Tandem_Repeat	231618	231663	65	+	.	.
scaffold1569	subtractBed	intrn	233089	233774	.	+	.	Parent=CGI_10010643;
	scaffold1569	TRF	Tandem_Repeat	233089	233774	1029	+	.	.
scaffold157	subtractBed	intrn	53983	54808	.	-	.	Parent=CGI_10021223;
	scaffold157	TRF	Tandem_Repeat	53983	54808	857	+	.	.
scaffold157	subtractBed	intrn	76283	76319	.	-	.	Parent=CGI_10021225;
	scaffold157	TRF	Tandem_Repeat	76283	76319	74	+	.	.
scaffold157	subtractBed	intrn	78085	78135	.	-	.	Parent=CGI_10021225;
	scaffold157	TRF	Tandem_Repeat	78085	78135	102	+	.	.
scaffold157	subtractBed	intrn	79456	79489	.	-	.	Parent=CGI_10021225;
	scaffold157	TRF	Tandem_Repeat	79456	79489	68	+	.	.
scaffold157	subtractBed	intrn	76283	76319	.	+	.	Parent=CGI_10021226;
	scaffold157	TRF	Tandem_Repeat	76283	76319	74	+	.	.
scaffold157	subtractBed	intrn	79456	79489	.	+	.	Parent=CGI_10021227;
	scaffold157	TRF	Tandem_Repeat	79456	79489	68	+	.	.
scaffold157	subtractBed	intrn	120783	120809	.	+	.	Parent=CGI_10021231;
	scaffold157	TRF	Tandem_Repeat	120783	120809	54	+	.	.
scaffold157	subtractBed	intrn	158088	158119	.	+	.	Parent=CGI_10021233;
	scaffold157	TRF	Tandem_Repeat	158088	158119	64	+	.	.
scaffold157	subtractBed	intrn	170735	171530	.	+	.	Parent=CGI_10021233;
	scaffold157	TRF	Tandem_Repeat	170735	171530	1234	+	.	.
scaffold157	subtractBed	intrn	198743	199071	.	+	.	Parent=CGI_10021233;
	scaffold157	TRF	Tandem_Repeat	198743	199071	371	+	.	.
scaffold157	subtractBed	intrn	223235	223273	.	-	.	Parent=CGI_10021235;
	scaffold157	TRF	Tandem_Repeat	223235	223273	51	+	.	.
scaffold157	subtractBed	intrn	233477	233520	.	+	.	Parent=CGI_10021237;
	scaffold157	TRF	Tandem_Repeat	233477	233520	88	+	.	.
scaffold157	subtractBed	intrn	243745	243881	.	-	.	Parent=CGI_10021238;
	scaffold157	TRF	Tandem_Repeat	243745	243881	220	+	.	.
scaffold157	subtractBed	intrn	247337	247505	.	+	.	Parent=CGI_10021239;
	scaffold157	TRF	Tandem_Repeat	247337	247505	293	+	.	.
scaffold157	subtractBed	intrn	248531	248572	.	+	.	Parent=CGI_10021239;
	scaffold157	TRF	Tandem_Repeat	248531	248572	84	+	.	.
scaffold157	subtractBed	intrn	273082	273119	.	+	.	Parent=CGI_10021241;
	scaffold157	TRF	Tandem_Repeat	273082	273119	76	+	.	.
scaffold157	subtractBed	intrn	377617	377876	.	+	.	Parent=CGI_10021249;
	scaffold157	TRF	Tandem_Repeat	377617	377876	259	+	.	.
scaffold157	subtractBed	intrn	377669	377878	.	+	.	Parent=CGI_10021249;
	scaffold157	TRF	Tandem_Repeat	377669	377878	226	+	.	.
scaffold157	subtractBed	intrn	381623	381756	.	+	.	Parent=CGI_10021249;
	scaffold157	TRF	Tandem_Repeat	381623	381756	74	+	.	.
scaffold157	subtractBed	intrn	381837	381941	.	+	.	Parent=CGI_10021249;
	scaffold157	TRF	Tandem_Repeat	381837	381941	70	+	.	.
scaffold157	subtractBed	intrn	392657	392710	.	+	.	Parent=CGI_10021252;
	scaffold157	TRF	Tandem_Repeat	392657	392710	108	+	.	.
scaffold157	subtractBed	intrn	405004	405061	.	-	.	Parent=CGI_10021254;
	scaffold157	TRF	Tandem_Repeat	405004	405061	57	+	.	.
scaffold157	subtractBed	intrn	405004	405061	.	-	.	Parent=CGI_10021254;
	scaffold157	TRF	Tandem_Repeat	405004	405061	66	+	.	.
scaffold157	subtractBed	intrn	420524	420587	.	-	.	Parent=CGI_10021256;
	scaffold157	TRF	Tandem_Repeat	420524	420587	128	+	.	.
scaffold157	subtractBed	intrn	439644	439792	.	-	.	Parent=CGI_10021257;
	scaffold157	TRF	Tandem_Repeat	439644	439792	178	+	.	.
scaffold157	subtractBed	intrn	531406	532946	.	+	.	Parent=CGI_10021265;
	scaffold157	TRF	Tandem_Repeat	531390	532946	2247	+	.	.
scaffold157	subtractBed	intrn	534372	534402	.	+	.	Parent=CGI_10021265;
	scaffold157	TRF	Tandem_Repeat	534372	534402	62	+	.	.
scaffold157	subtractBed	intrn	553447	553747	.	+	.	Parent=CGI_10021268;
	scaffold157	TRF	Tandem_Repeat	553447	553747	503	+	.	.
scaffold157	subtractBed	intrn	583486	583543	.	+	.	Parent=CGI_10021271;
	scaffold157	TRF	Tandem_Repeat	583486	583543	50	+	.	.
scaffold157	subtractBed	intrn	598408	598460	.	+	.	Parent=CGI_10021273;
	scaffold157	TRF	Tandem_Repeat	598408	598460	106	+	.	.
scaffold157	subtractBed	intrn	599003	599043	.	+	.	Parent=CGI_10021273;
	scaffold157	TRF	Tandem_Repeat	599003	599043	55	+	.	.
scaffold157	subtractBed	intrn	614163	614519	.	-	.	Parent=CGI_10021275;
	scaffold157	TRF	Tandem_Repeat	614163	614519	259	+	.	.
scaffold157	subtractBed	intrn	623439	623514	.	+	.	Parent=CGI_10021276;
	scaffold157	TRF	Tandem_Repeat	623439	623514	152	+	.	.
scaffold1570	subtractBed	intrn	14565	14747	.	+	.	Parent=CGI_10002599;
	scaffold1570	WUBlastX	DNA_PiggyBac	14565	14747	42	+	.	.
scaffold1570	subtractBed	intrn	16312	17103	.	+	.	Parent=CGI_10002599;
	scaffold1570	WUBlastX	DNA_P	16312	17103	118	+	.	.
scaffold1570	subtractBed	intrn	18066	18751	.	-	.	Parent=CGI_10002600;
	scaffold1570	TRF	Tandem_Repeat	18066	18751	1036	+	.	.
scaffold1570	subtractBed	intrn	23934	23994	.	-	.	Parent=CGI_10002600;
	scaffold1570	TRF	Tandem_Repeat	23934	23994	122	+	.	.
scaffold1571	subtractBed	intrn	109973	110020	.	+	.	Parent=CGI_10012168;
	scaffold1571	TRF	Tandem_Repeat	109973	110020	96	+	.	.
scaffold1571	subtractBed	intrn	110329	110365	.	+	.	Parent=CGI_10012168;
	scaffold1571	TRF	Tandem_Repeat	110329	110365	74	+	.	.
scaffold1571	subtractBed	intrn	117455	118657	.	+	.	Parent=CGI_10012168;
	scaffold1571	TRF	Tandem_Repeat	117455	118657	1674	+	.	.
scaffold1571	subtractBed	intrn	126262	126935	.	-	.	Parent=CGI_10012169;
	scaffold1571	TRF	Tandem_Repeat	126262	126967	1169	+	.	.
scaffold1571	subtractBed	intrn	129613	129683	.	-	.	Parent=CGI_10012169;
	scaffold1571	TRF	Tandem_Repeat	129613	129683	70	+	.	.
scaffold1572	subtractBed	intrn	4679	4737	.	+	.	Parent=CGI_10007810;
	scaffold1572	TRF	Tandem_Repeat	4679	4737	50	+	.	.
scaffold1572	subtractBed	intrn	47202	47440	.	-	.	Parent=CGI_10007811;
	scaffold1572	TRF	Tandem_Repeat	47202	47440	424	+	.	.
scaffold1572	subtractBed	intrn	60419	60456	.	+	.	Parent=CGI_10007812;
	scaffold1572	TRF	Tandem_Repeat	60419	60456	58	+	.	.
scaffold1572	subtractBed	intrn	80559	80609	.	+	.	Parent=CGI_10007816;
	scaffold1572	TRF	Tandem_Repeat	80559	80609	75	+	.	.
scaffold1572	subtractBed	intrn	105171	106012	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	105144	106012	1038	+	.	.
scaffold1572	subtractBed	intrn	109526	109782	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	109526	109782	180	+	.	.
scaffold1572	subtractBed	intrn	109492	109798	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	109492	109798	157	+	.	.
scaffold1572	subtractBed	intrn	113384	114076	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	113384	114076	621	+	.	.
scaffold1572	subtractBed	intrn	113415	114076	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	113415	114076	447	+	.	.
scaffold1572	subtractBed	intrn	113383	114076	.	+	.	Parent=CGI_10007819;
	scaffold1572	TRF	Tandem_Repeat	113383	114076	449	+	.	.
scaffold1572	subtractBed	intrn	123431	123577	.	+	.	Parent=CGI_10007820;
	scaffold1572	TRF	Tandem_Repeat	123431	123577	161	+	.	.
scaffold1572	subtractBed	intrn	136012	136770	.	+	.	Parent=CGI_10007822;
	scaffold1572	TRF	Tandem_Repeat	136012	136770	1134	+	.	.
scaffold1572	subtractBed	intrn	138468	138520	.	+	.	Parent=CGI_10007822;
	scaffold1572	TRF	Tandem_Repeat	138468	138520	106	+	.	.
scaffold1572	subtractBed	intrn	140730	141086	.	+	.	Parent=CGI_10007822;
	scaffold1572	TRF	Tandem_Repeat	140730	141086	187	+	.	.
scaffold1572	subtractBed	intrn	141151	141277	.	+	.	Parent=CGI_10007822;
	scaffold1572	TRF	Tandem_Repeat	141151	141277	139	+	.	.
scaffold1572	subtractBed	intrn	141150	141292	.	+	.	Parent=CGI_10007822;
	scaffold1572	TRF	Tandem_Repeat	141150	141292	109	+	.	.
scaffold1572	subtractBed	intrn	157354	157405	.	-	.	Parent=CGI_10007823;
	scaffold1572	TRF	Tandem_Repeat	157354	157405	104	+	.	.
scaffold1574	subtractBed	intrn	54978	55332	.	-	.	Parent=CGI_10016318;
	scaffold1574	TRF	Tandem_Repeat	54978	55332	530	+	.	.
scaffold1574	subtractBed	intrn	55615	55733	.	-	.	Parent=CGI_10016318;
	scaffold1574	TRF	Tandem_Repeat	55615	55733	150	+	.	.
scaffold1574	subtractBed	intrn	83787	83877	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	83787	83877	155	+	.	.
scaffold1574	subtractBed	intrn	83954	84050	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	83954	84050	131	+	.	.
scaffold1574	subtractBed	intrn	87536	87611	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	87536	87611	120	+	.	.
scaffold1574	subtractBed	intrn	90866	90908	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	90866	90908	86	+	.	.
scaffold1574	subtractBed	intrn	92658	92790	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	92658	92790	86	+	.	.
scaffold1574	subtractBed	intrn	92658	92788	.	+	.	Parent=CGI_10016320;
	scaffold1574	TRF	Tandem_Repeat	92658	92788	118	+	.	.
scaffold1574	subtractBed	intrn	92792	93215	.	+	.	Parent=CGI_10016320;
	scaffold1574	WUBlastX	LINE_Penelope	92792	93496	172	+	.	.
scaffold1574	subtractBed	intrn	179399	179447	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	179399	179447	98	+	.	.
scaffold1574	subtractBed	intrn	179490	179523	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	179490	179523	59	+	.	.
scaffold1574	subtractBed	intrn	183077	183233	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	183077	183233	244	+	.	.
scaffold1574	subtractBed	intrn	184743	184777	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	184743	184777	52	+	.	.
scaffold1574	subtractBed	intrn	184788	185624	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	184788	185624	1275	+	.	.
scaffold1574	subtractBed	intrn	192632	192659	.	+	.	Parent=CGI_10016323;
	scaffold1574	TRF	Tandem_Repeat	192632	192659	56	+	.	.
scaffold1574	subtractBed	intrn	213493	213563	.	+	.	Parent=CGI_10016324;
	scaffold1574	TRF	Tandem_Repeat	213493	213563	142	+	.	.
scaffold1574	subtractBed	intrn	215350	215392	.	+	.	Parent=CGI_10016324;
	scaffold1574	TRF	Tandem_Repeat	215350	215392	86	+	.	.
scaffold1574	subtractBed	intrn	215563	215589	.	+	.	Parent=CGI_10016324;
	scaffold1574	TRF	Tandem_Repeat	215563	215589	54	+	.	.
scaffold1574	subtractBed	intrn	310929	310990	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	310929	310990	81	+	.	.
scaffold1574	subtractBed	intrn	320434	320695	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	320434	320695	325	+	.	.
scaffold1574	subtractBed	intrn	323731	323767	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	323731	323767	56	+	.	.
scaffold1574	subtractBed	intrn	326548	327310	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	326548	327310	1070	+	.	.
scaffold1574	subtractBed	intrn	328144	328212	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	328144	328212	52	+	.	.
scaffold1574	subtractBed	intrn	328144	328212	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	328144	328212	70	+	.	.
scaffold1574	subtractBed	intrn	328074	328242	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	328074	328242	80	+	.	.
scaffold1574	subtractBed	intrn	328165	328277	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	328165	328277	91	+	.	.
scaffold1574	subtractBed	intrn	328131	328262	.	+	.	Parent=CGI_10016327;
	scaffold1574	TRF	Tandem_Repeat	328131	328262	90	+	.	.
scaffold1574	subtractBed	intrn	340517	340549	.	-	.	Parent=CGI_10016329;
	scaffold1574	TRF	Tandem_Repeat	340517	340549	57	+	.	.
scaffold1574	subtractBed	intrn	346325	346455	.	-	.	Parent=CGI_10016329;
	scaffold1574	TRF	Tandem_Repeat	346325	346455	122	+	.	.
scaffold1574	subtractBed	intrn	356488	356525	.	+	.	Parent=CGI_10016330;
	scaffold1574	TRF	Tandem_Repeat	356488	356525	60	+	.	.
scaffold1574	subtractBed	intrn	404296	404327	.	+	.	Parent=CGI_10016331;
	scaffold1574	TRF	Tandem_Repeat	404296	404327	57	+	.	.
scaffold1574	subtractBed	intrn	455249	455308	.	+	.	Parent=CGI_10016335;
	scaffold1574	TRF	Tandem_Repeat	455249	455308	120	+	.	.
scaffold1574	subtractBed	intrn	452567	452884	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LTR_Gypsy	452567	452884	48	+	.	.
scaffold1574	subtractBed	intrn	456162	457511	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_RTE-X	456162	457511	228	-	.	.
scaffold1574	subtractBed	intrn	455676	457628	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_RTE-X	455676	457628	168	-	.	.
scaffold1574	subtractBed	intrn	452681	453022	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LTR_Gypsy	452681	453022	47	+	.	.
scaffold1574	subtractBed	intrn	458294	458650	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_Proto2	458294	458650	37	-	.	.
scaffold1574	subtractBed	intrn	456834	457931	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_L2	456834	457931	188	-	.	.
scaffold1574	subtractBed	intrn	457849	458280	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_I	457849	458280	69	-	.	.
scaffold1574	subtractBed	intrn	456630	457619	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_RTE-X	456630	457619	334	-	.	.
scaffold1574	subtractBed	intrn	452807	453163	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LTR_Gypsy	452807	453163	39	+	.	.
scaffold1574	subtractBed	intrn	458288	458536	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LINE_Telomeric	458288	458536	51	-	.	.
scaffold1574	subtractBed	intrn	453155	453481	.	+	.	Parent=CGI_10016335;
	scaffold1574	WUBlastX	LTR_Gypsy	453155	453481	48	+	.	.
scaffold1575	subtractBed	intrn	13351	13418	.	+	.	Parent=CGI_10004716;
	scaffold1575	TRF	Tandem_Repeat	13351	13418	129	+	.	.
scaffold1575	subtractBed	intrn	62336	62364	.	-	.	Parent=CGI_10004720;
	scaffold1575	WUBlastX	RC_Helitron	62336	62560	88	-	.	.
scaffold1575	subtractBed	intrn	75707	75708	.	+	.	Parent=CGI_10004721;
	scaffold1575	WUBlastX	RC_Helitron	75707	75988	117	+	.	.
scaffold1575	subtractBed	intrn	101330	101374	.	-	.	Parent=CGI_10004722;
	scaffold1575	TRF	Tandem_Repeat	101330	101374	90	+	.	.
scaffold1575	subtractBed	intrn	101330	101374	.	+	.	Parent=CGI_10004723;
	scaffold1575	TRF	Tandem_Repeat	101330	101374	90	+	.	.
scaffold1576	subtractBed	intrn	85718	85775	.	-	.	Parent=CGI_10004469;
	scaffold1576	TRF	Tandem_Repeat	85718	85775	73	+	.	.
scaffold1576	subtractBed	intrn	85718	85769	.	-	.	Parent=CGI_10004469;
	scaffold1576	TRF	Tandem_Repeat	85718	85769	86	+	.	.
scaffold1577	subtractBed	intrn	24029	24101	.	-	.	Parent=CGI_10002923;
	scaffold1577	TRF	Tandem_Repeat	24029	24101	146	+	.	.
scaffold1577	subtractBed	intrn	53258	53309	.	+	.	Parent=CGI_10002925;
	scaffold1577	TRF	Tandem_Repeat	53258	53309	104	+	.	.
scaffold1578	subtractBed	intrn	56008	56547	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Ngaro	56008	56547	183	-	.	.
scaffold1578	subtractBed	intrn	62452	62522	.	-	.	Parent=CGI_10008160;
	scaffold1578	TRF	Tandem_Repeat	62452	62522	117	+	.	.
scaffold1578	subtractBed	intrn	65362	65520	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	65362	65520	23	+	.	.
scaffold1578	subtractBed	intrn	63793	64236	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LINE_L1-Tx1	63793	64236	91	-	.	.
scaffold1578	subtractBed	intrn	66072	66479	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66072	66479	328	+	.	.
scaffold1578	subtractBed	intrn	67321	67578	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	67321	67578	220	+	.	.
scaffold1578	subtractBed	intrn	66502	66636	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66502	66636	56	+	.	.
scaffold1578	subtractBed	intrn	68314	68400	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	68314	68400	25	+	.	.
scaffold1578	subtractBed	intrn	66571	66681	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66571	66681	21	+	.	.
scaffold1578	subtractBed	intrn	66479	66550	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66479	66550	47	+	.	.
scaffold1578	subtractBed	intrn	65811	65909	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	65811	65909	34	+	.	.
scaffold1578	subtractBed	intrn	66976	67035	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66976	67035	26	+	.	.
scaffold1578	subtractBed	intrn	65862	66473	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	65862	66473	116	+	.	.
scaffold1578	subtractBed	intrn	66526	66654	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	66526	66654	74	+	.	.
scaffold1578	subtractBed	intrn	67258	67575	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	67258	67575	114	+	.	.
scaffold1578	subtractBed	intrn	65439	65573	.	-	.	Parent=CGI_10008160;
	scaffold1578	WUBlastX	LTR_Pao	65439	65573	21	+	.	.
scaffold1578	subtractBed	intrn	73651	73729	.	+	.	Parent=CGI_10008161;
	scaffold1578	TRF	Tandem_Repeat	73651	73729	158	+	.	.
scaffold1578	subtractBed	intrn	168355	168387	.	-	.	Parent=CGI_10008165;
	scaffold1578	TRF	Tandem_Repeat	168355	168387	66	+	.	.
scaffold1579	subtractBed	intrn	6700	6751	.	+	.	Parent=CGI_10016843;
	scaffold1579	TRF	Tandem_Repeat	6700	6751	79	+	.	.
scaffold1579	subtractBed	intrn	9998	10023	.	+	.	Parent=CGI_10016843;
	scaffold1579	TRF	Tandem_Repeat	9998	10023	52	+	.	.
scaffold1579	subtractBed	intrn	10895	10981	.	+	.	Parent=CGI_10016843;
	scaffold1579	TRF	Tandem_Repeat	10895	10981	95	+	.	.
scaffold1579	subtractBed	intrn	6700	6751	.	-	.	Parent=CGI_10016845;
	scaffold1579	TRF	Tandem_Repeat	6700	6751	79	+	.	.
scaffold1579	subtractBed	intrn	9998	10023	.	-	.	Parent=CGI_10016845;
	scaffold1579	TRF	Tandem_Repeat	9998	10023	52	+	.	.
scaffold1579	subtractBed	intrn	38215	38632	.	+	.	Parent=CGI_10016847;
	scaffold1579	TRF	Tandem_Repeat	38215	38632	483	+	.	.
scaffold1579	subtractBed	intrn	147269	147372	.	+	.	Parent=CGI_10016857;
	scaffold1579	TRF	Tandem_Repeat	147269	147372	181	+	.	.
scaffold1579	subtractBed	intrn	210035	210076	.	-	.	Parent=CGI_10016862;
	scaffold1579	TRF	Tandem_Repeat	210035	210076	68	+	.	.
scaffold1579	subtractBed	intrn	240320	240610	.	+	.	Parent=CGI_10016864;
	scaffold1579	TRF	Tandem_Repeat	240320	240610	354	+	.	.
scaffold1579	subtractBed	intrn	240991	241118	.	+	.	Parent=CGI_10016864;
	scaffold1579	TRF	Tandem_Repeat	240991	241118	188	+	.	.
scaffold1579	subtractBed	intrn	240993	241150	.	+	.	Parent=CGI_10016864;
	scaffold1579	TRF	Tandem_Repeat	240993	241150	176	+	.	.
scaffold1579	subtractBed	intrn	241188	241292	.	+	.	Parent=CGI_10016864;
	scaffold1579	TRF	Tandem_Repeat	241188	241292	147	+	.	.
scaffold1579	subtractBed	intrn	243730	244856	.	+	.	Parent=CGI_10016864;
	scaffold1579	TRF	Tandem_Repeat	243730	244856	1746	+	.	.
scaffold1579	subtractBed	intrn	317939	318009	.	+	.	Parent=CGI_10016868;
	scaffold1579	WUBlastX	LINE_CR1	317939	318343	58	-	.	.
scaffold1579	subtractBed	intrn	325090	325425	.	+	.	Parent=CGI_10016869;
	scaffold1579	WUBlastX	LINE_RTE-X	325090	325425	63	+	.	.
scaffold1579	subtractBed	intrn	326463	327233	.	+	.	Parent=CGI_10016869;
	scaffold1579	WUBlastX	LINE_RTE-X	326463	327233	180	+	.	.
scaffold1579	subtractBed	intrn	324997	325464	.	+	.	Parent=CGI_10016869;
	scaffold1579	WUBlastX	LINE_L1	324997	325464	39	+	.	.
scaffold1579	subtractBed	intrn	325428	327092	.	+	.	Parent=CGI_10016869;
	scaffold1579	WUBlastX	LINE_RTE-X	325428	327092	698	+	.	.
scaffold1579	subtractBed	intrn	352715	352742	.	-	.	Parent=CGI_10016871;
	scaffold1579	TRF	Tandem_Repeat	352715	352742	56	+	.	.
scaffold1579	subtractBed	intrn	362000	362030	.	+	.	Parent=CGI_10016872;
	scaffold1579	TRF	Tandem_Repeat	362000	362030	62	+	.	.
scaffold1579	subtractBed	intrn	360056	360724	.	+	.	Parent=CGI_10016872;
	scaffold1579	TRF	Tandem_Repeat	360056	360724	707	+	.	.
scaffold1579	subtractBed	intrn	379563	379611	.	+	.	Parent=CGI_10016873;
	scaffold1579	TRF	Tandem_Repeat	379563	379611	91	+	.	.
scaffold1579	subtractBed	intrn	380355	380962	.	+	.	Parent=CGI_10016873;
	scaffold1579	TRF	Tandem_Repeat	380355	380962	450	+	.	.
scaffold1579	subtractBed	intrn	380355	380962	.	+	.	Parent=CGI_10016873;
	scaffold1579	TRF	Tandem_Repeat	380355	380962	497	+	.	.
scaffold1579	subtractBed	intrn	380677	380827	.	+	.	Parent=CGI_10016873;
	scaffold1579	TRF	Tandem_Repeat	380677	380827	206	+	.	.
scaffold1579	subtractBed	intrn	404355	404409	.	+	.	Parent=CGI_10016876;
	scaffold1579	TRF	Tandem_Repeat	404355	404409	110	+	.	.
scaffold1579	subtractBed	intrn	404436	404471	.	+	.	Parent=CGI_10016876;
	scaffold1579	TRF	Tandem_Repeat	404436	404471	72	+	.	.
scaffold1579	subtractBed	intrn	423435	423495	.	+	.	Parent=CGI_10016877;
	scaffold1579	TRF	Tandem_Repeat	423435	423495	104	+	.	.
scaffold1579	subtractBed	intrn	436657	436701	.	+	.	Parent=CGI_10016877;
	scaffold1579	TRF	Tandem_Repeat	436657	436701	90	+	.	.
scaffold1579	subtractBed	intrn	441322	441365	.	+	.	Parent=CGI_10016877;
	scaffold1579	TRF	Tandem_Repeat	441322	441365	88	+	.	.
scaffold1579	subtractBed	intrn	476645	476919	.	+	.	Parent=CGI_10016880;
	scaffold1579	TRF	Tandem_Repeat	476645	476919	370	+	.	.
scaffold1579	subtractBed	intrn	478663	478717	.	+	.	Parent=CGI_10016881;
	scaffold1579	TRF	Tandem_Repeat	478663	478717	110	+	.	.
scaffold1581	subtractBed	intrn	57718	57759	.	+	.	Parent=CGI_10005311;
	scaffold1581	TRF	Tandem_Repeat	57718	57759	77	+	.	.
scaffold1581	subtractBed	intrn	72693	72730	.	+	.	Parent=CGI_10005312;
	scaffold1581	TRF	Tandem_Repeat	72693	72730	67	+	.	.
scaffold1581	subtractBed	intrn	72850	73589	.	+	.	Parent=CGI_10005312;
	scaffold1581	TRF	Tandem_Repeat	72850	73589	958	+	.	.
scaffold1581	subtractBed	intrn	77501	78355	.	+	.	Parent=CGI_10005312;
	scaffold1581	TRF	Tandem_Repeat	77501	78355	1032	+	.	.
scaffold1581	subtractBed	intrn	103916	103960	.	-	.	Parent=CGI_10005314;
	scaffold1581	TRF	Tandem_Repeat	103916	103960	90	+	.	.
scaffold1583	subtractBed	intrn	1647	1714	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	1647	1714	104	+	.	.
scaffold1583	subtractBed	intrn	28218	28313	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	28218	28313	76	+	.	.
scaffold1583	subtractBed	intrn	30670	30702	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	30670	30702	57	+	.	.
scaffold1583	subtractBed	intrn	31398	31552	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	31398	31552	67	+	.	.
scaffold1583	subtractBed	intrn	31462	31608	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	31462	31608	73	+	.	.
scaffold1583	subtractBed	intrn	40104	40167	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	40104	40167	56	+	.	.
scaffold1583	subtractBed	intrn	40128	40159	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	40128	40159	55	+	.	.
scaffold1583	subtractBed	intrn	40112	40168	.	-	.	Parent=CGI_10025805;
	scaffold1583	TRF	Tandem_Repeat	40112	40168	69	+	.	.
scaffold1583	subtractBed	intrn	57183	57317	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	57183	57317	56	+	.	.
scaffold1583	subtractBed	intrn	65641	66023	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	65608	66023	427	+	.	.
scaffold1583	subtractBed	intrn	65641	66024	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	65602	66024	490	+	.	.
scaffold1583	subtractBed	intrn	67216	67297	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	67210	67297	97	+	.	.
scaffold1583	subtractBed	intrn	67299	67424	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	67299	67424	70	+	.	.
scaffold1583	subtractBed	intrn	67316	67536	.	+	.	Parent=CGI_10025806;
	scaffold1583	TRF	Tandem_Repeat	67316	67536	158	+	.	.
scaffold1583	subtractBed	intrn	114618	114656	.	-	.	Parent=CGI_10025809;
	scaffold1583	TRF	Tandem_Repeat	114618	114656	78	+	.	.
scaffold1583	subtractBed	intrn	136504	136743	.	-	.	Parent=CGI_10025812;
	scaffold1583	TRF	Tandem_Repeat	136504	136743	191	+	.	.
scaffold1583	subtractBed	intrn	137571	137656	.	-	.	Parent=CGI_10025812;
	scaffold1583	TRF	Tandem_Repeat	137571	137656	70	+	.	.
scaffold1583	subtractBed	intrn	137878	137920	.	-	.	Parent=CGI_10025812;
	scaffold1583	TRF	Tandem_Repeat	137878	137920	86	+	.	.
scaffold1583	subtractBed	intrn	138251	138300	.	-	.	Parent=CGI_10025812;
	scaffold1583	TRF	Tandem_Repeat	138251	138300	82	+	.	.
scaffold1583	subtractBed	intrn	181700	181934	.	+	.	Parent=CGI_10025815;
	scaffold1583	TRF	Tandem_Repeat	181700	181934	229	+	.	.
scaffold1583	subtractBed	intrn	200096	200144	.	+	.	Parent=CGI_10025817;
	scaffold1583	TRF	Tandem_Repeat	200096	200144	98	+	.	.
scaffold1583	subtractBed	intrn	200632	200965	.	+	.	Parent=CGI_10025817;
	scaffold1583	TRF	Tandem_Repeat	200632	200965	297	+	.	.
scaffold1583	subtractBed	intrn	304774	304838	.	-	.	Parent=CGI_10025823;
	scaffold1583	TRF	Tandem_Repeat	304774	304838	130	+	.	.
scaffold1583	subtractBed	intrn	304901	304931	.	-	.	Parent=CGI_10025823;
	scaffold1583	TRF	Tandem_Repeat	304901	304931	62	+	.	.
scaffold1583	subtractBed	intrn	324351	324659	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_RTE-X	324351	324659	138	-	.	.
scaffold1583	subtractBed	intrn	323785	324345	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_RTE-X	323785	324345	144	-	.	.
scaffold1583	subtractBed	intrn	323387	323725	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_RTE-X	323387	323725	62	-	.	.
scaffold1583	subtractBed	intrn	323902	324345	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_RTE-X	323902	324345	154	-	.	.
scaffold1583	subtractBed	intrn	323471	323725	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_RTE-X	323471	323725	84	-	.	.
scaffold1583	subtractBed	intrn	324408	324704	.	-	.	Parent=CGI_10025823;
	scaffold1583	WUBlastX	LINE_Proto2	324408	324704	42	-	.	.
scaffold1583	subtractBed	intrn	330557	330670	.	-	.	Parent=CGI_10025825;
	scaffold1583	WUBlastX	LINE_RTE-X	330557	330670	50	+	.	.
scaffold1583	subtractBed	intrn	330184	330501	.	-	.	Parent=CGI_10025825;
	scaffold1583	WUBlastX	LINE_RTE-X	330184	330501	126	+	.	.
scaffold1583	subtractBed	intrn	330196	330585	.	-	.	Parent=CGI_10025825;
	scaffold1583	WUBlastX	LINE_RTE-X	330196	330585	99	+	.	.
scaffold1583	subtractBed	intrn	330696	331175	.	-	.	Parent=CGI_10025825;
	scaffold1583	WUBlastX	LINE_RTE-X	330696	331175	86	+	.	.
scaffold1583	subtractBed	intrn	381309	381352	.	+	.	Parent=CGI_10025828;
	scaffold1583	TRF	Tandem_Repeat	381309	381352	88	+	.	.
scaffold1583	subtractBed	intrn	390301	390341	.	+	.	Parent=CGI_10025828;
	scaffold1583	TRF	Tandem_Repeat	390301	390341	82	+	.	.
scaffold1583	subtractBed	intrn	390435	390462	.	+	.	Parent=CGI_10025828;
	scaffold1583	TRF	Tandem_Repeat	390435	390462	56	+	.	.
scaffold1583	subtractBed	intrn	622306	622363	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	622306	622363	102	+	.	.
scaffold1583	subtractBed	intrn	623511	623679	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	623511	623679	248	+	.	.
scaffold1583	subtractBed	intrn	624431	624584	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	624431	624584	254	+	.	.
scaffold1583	subtractBed	intrn	624673	624726	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	624673	624726	54	+	.	.
scaffold1583	subtractBed	intrn	626470	626919	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	626470	626919	408	+	.	.
scaffold1583	subtractBed	intrn	626874	626933	.	-	.	Parent=CGI_10025835;
	scaffold1583	TRF	Tandem_Repeat	626874	626933	59	+	.	.
scaffold1583	subtractBed	intrn	640267	641200	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	640267	641200	1595	+	.	.
scaffold1583	subtractBed	intrn	642336	642485	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	642336	642485	221	+	.	.
scaffold1583	subtractBed	intrn	643806	643831	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	643806	643831	52	+	.	.
scaffold1583	subtractBed	intrn	651444	651681	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	651410	651681	332	+	.	.
scaffold1583	subtractBed	intrn	652818	653059	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	652818	653059	413	+	.	.
scaffold1583	subtractBed	intrn	657719	657806	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	657719	657806	114	+	.	.
scaffold1583	subtractBed	intrn	659453	659540	.	+	.	Parent=CGI_10025836;
	scaffold1583	TRF	Tandem_Repeat	659453	659540	114	+	.	.
scaffold1583	subtractBed	intrn	690851	691258	.	-	.	Parent=CGI_10025837;
	scaffold1583	TRF	Tandem_Repeat	690851	691258	534	+	.	.
scaffold1583	subtractBed	intrn	691255	691539	.	-	.	Parent=CGI_10025837;
	scaffold1583	TRF	Tandem_Repeat	691255	691548	473	+	.	.
scaffold1583	subtractBed	intrn	691860	692252	.	-	.	Parent=CGI_10025837;
	scaffold1583	TRF	Tandem_Repeat	691860	692283	508	+	.	.
scaffold1583	subtractBed	intrn	694120	694662	.	-	.	Parent=CGI_10025837;
	scaffold1583	TRF	Tandem_Repeat	694120	694689	732	+	.	.
scaffold1583	subtractBed	intrn	699074	699117	.	-	.	Parent=CGI_10025837;
	scaffold1583	TRF	Tandem_Repeat	699074	699117	88	+	.	.
scaffold1583	subtractBed	intrn	702091	702144	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	702091	702144	108	+	.	.
scaffold1583	subtractBed	intrn	704215	704308	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	704215	704308	89	+	.	.
scaffold1583	subtractBed	intrn	705090	705210	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	705090	705210	127	+	.	.
scaffold1583	subtractBed	intrn	705265	705403	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	705265	705403	127	+	.	.
scaffold1583	subtractBed	intrn	705480	705571	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	705480	705571	96	+	.	.
scaffold1583	subtractBed	intrn	707771	707826	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	707771	707826	103	+	.	.
scaffold1583	subtractBed	intrn	708291	708329	.	+	.	Parent=CGI_10025838;
	scaffold1583	TRF	Tandem_Repeat	708291	708329	78	+	.	.
scaffold1583	subtractBed	intrn	716368	716477	.	-	.	Parent=CGI_10025839;
	scaffold1583	TRF	Tandem_Repeat	716368	716477	193	+	.	.
scaffold1583	subtractBed	intrn	718775	718825	.	-	.	Parent=CGI_10025839;
	scaffold1583	TRF	Tandem_Repeat	718775	718825	102	+	.	.
scaffold1583	subtractBed	intrn	722696	722735	.	-	.	Parent=CGI_10025839;
	scaffold1583	TRF	Tandem_Repeat	722696	722735	80	+	.	.
scaffold1583	subtractBed	intrn	758279	758312	.	-	.	Parent=CGI_10025840;
	scaffold1583	TRF	Tandem_Repeat	758279	758312	59	+	.	.
scaffold1583	subtractBed	intrn	757569	758177	.	-	.	Parent=CGI_10025840;
	scaffold1583	WUBlastX	DNA_Maverick	757569	758177	406	-	.	.
scaffold1583	subtractBed	intrn	759064	759594	.	-	.	Parent=CGI_10025840;
	scaffold1583	WUBlastX	DNA_Maverick	759064	759594	289	-	.	.
scaffold1583	subtractBed	intrn	760038	760841	.	-	.	Parent=CGI_10025840;
	scaffold1583	WUBlastX	DNA_Maverick	760038	760841	299	-	.	.
scaffold1583	subtractBed	intrn	759061	759990	.	-	.	Parent=CGI_10025840;
	scaffold1583	WUBlastX	DNA_Maverick	759061	759990	266	-	.	.
scaffold1583	subtractBed	intrn	764151	764196	.	-	.	Parent=CGI_10025840;
	scaffold1583	TRF	Tandem_Repeat	764151	764196	92	+	.	.
scaffold1583	subtractBed	intrn	857862	858272	.	-	.	Parent=CGI_10025847;
	scaffold1583	TRF	Tandem_Repeat	857862	858272	130	+	.	.
scaffold1583	subtractBed	intrn	908525	908578	.	-	.	Parent=CGI_10025853;
	scaffold1583	TRF	Tandem_Repeat	908525	908578	92	+	.	.
scaffold1583	subtractBed	intrn	970778	971566	.	+	.	Parent=CGI_10025857;
	scaffold1583	TRF	Tandem_Repeat	970778	971566	1048	+	.	.
scaffold1583	subtractBed	intrn	970771	971566	.	+	.	Parent=CGI_10025857;
	scaffold1583	TRF	Tandem_Repeat	970771	971566	1077	+	.	.
scaffold1583	subtractBed	intrn	970049	970102	.	+	.	Parent=CGI_10025857;
	scaffold1583	WUBlastX	LINE_RTE-X	970049	970102	33	+	.	.
scaffold1583	subtractBed	intrn	1081933	1082429	.	-	.	Parent=CGI_10025859;
	scaffold1583	TRF	Tandem_Repeat	1081933	1082429	459	+	.	.
scaffold1583	subtractBed	intrn	1087260	1087295	.	-	.	Parent=CGI_10025859;
	scaffold1583	TRF	Tandem_Repeat	1087260	1087295	63	+	.	.
scaffold1583	subtractBed	intrn	1089802	1090120	.	-	.	Parent=CGI_10025859;
	scaffold1583	TRF	Tandem_Repeat	1089802	1090120	525	+	.	.
scaffold1583	subtractBed	intrn	1094425	1094567	.	-	.	Parent=CGI_10025859;
	scaffold1583	TRF	Tandem_Repeat	1094425	1094567	234	+	.	.
scaffold1584	subtractBed	intrn	14406	14445	.	+	.	Parent=CGI_10015069;
	scaffold1584	TRF	Tandem_Repeat	14406	14445	80	+	.	.
scaffold1584	subtractBed	intrn	19215	19503	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	19215	19503	181	+	.	.
scaffold1584	subtractBed	intrn	19215	19500	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	19215	19500	193	+	.	.
scaffold1584	subtractBed	intrn	22813	23019	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	22813	23019	193	+	.	.
scaffold1584	subtractBed	intrn	22813	23021	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	22813	23021	212	+	.	.
scaffold1584	subtractBed	intrn	20863	20919	.	-	.	Parent=CGI_10015070;
	scaffold1584	WUBlastX	LINE_L1-Tx1	20863	20919	31	+	.	.
scaffold1584	subtractBed	intrn	20967	21182	.	-	.	Parent=CGI_10015070;
	scaffold1584	WUBlastX	LINE_L1	20967	21182	56	+	.	.
scaffold1584	subtractBed	intrn	31432	31616	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	31432	31616	165	+	.	.
scaffold1584	subtractBed	intrn	31422	31725	.	-	.	Parent=CGI_10015070;
	scaffold1584	TRF	Tandem_Repeat	31422	31725	252	+	.	.
scaffold1584	subtractBed	intrn	77898	77938	.	-	.	Parent=CGI_10015073;
	scaffold1584	TRF	Tandem_Repeat	77898	77938	82	+	.	.
scaffold1584	subtractBed	intrn	92034	92390	.	-	.	Parent=CGI_10015073;
	scaffold1584	WUBlastX	LINE_RTE-X	92034	92390	133	+	.	.
scaffold1584	subtractBed	intrn	91995	92426	.	-	.	Parent=CGI_10015073;
	scaffold1584	WUBlastX	LINE_RTE-X	91995	92426	94	+	.	.
scaffold1584	subtractBed	intrn	94568	94623	.	-	.	Parent=CGI_10015073;
	scaffold1584	TRF	Tandem_Repeat	94568	94623	112	+	.	.
scaffold1584	subtractBed	intrn	108317	108357	.	-	.	Parent=CGI_10015075;
	scaffold1584	TRF	Tandem_Repeat	108317	108357	82	+	.	.
scaffold1584	subtractBed	intrn	140455	140715	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	140455	140715	186	+	.	.
scaffold1584	subtractBed	intrn	140689	140943	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	140689	140943	395	+	.	.
scaffold1584	subtractBed	intrn	142213	142348	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	142213	142348	115	+	.	.
scaffold1584	subtractBed	intrn	151494	152183	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	151494	152183	409	+	.	.
scaffold1584	subtractBed	intrn	151498	152181	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	151498	152181	450	+	.	.
scaffold1584	subtractBed	intrn	152068	152270	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	152068	152270	90	+	.	.
scaffold1584	subtractBed	intrn	161355	161406	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	161355	161406	86	+	.	.
scaffold1584	subtractBed	intrn	162381	162428	.	-	.	Parent=CGI_10015081;
	scaffold1584	TRF	Tandem_Repeat	162381	162428	96	+	.	.
scaffold1585	subtractBed	intrn	7318	7343	.	-	.	Parent=CGI_10012582;
	scaffold1585	TRF	Tandem_Repeat	7318	7343	52	+	.	.
scaffold1585	subtractBed	intrn	7384	7599	.	-	.	Parent=CGI_10012582;
	scaffold1585	WUBlastX	LINE_RTE-X	7384	7599	71	+	.	.
scaffold1585	subtractBed	intrn	7399	7662	.	-	.	Parent=CGI_10012582;
	scaffold1585	WUBlastX	LINE_RTE-X	7399	7662	52	+	.	.
scaffold1585	subtractBed	intrn	31387	31448	.	-	.	Parent=CGI_10012585;
	scaffold1585	TRF	Tandem_Repeat	31387	31448	115	+	.	.
scaffold1585	subtractBed	intrn	53761	54121	.	-	.	Parent=CGI_10012588;
	scaffold1585	TRF	Tandem_Repeat	53761	54121	656	+	.	.
scaffold1585	subtractBed	intrn	61158	61349	.	-	.	Parent=CGI_10012588;
	scaffold1585	TRF	Tandem_Repeat	61158	61349	357	+	.	.
scaffold1585	subtractBed	intrn	62860	62889	.	-	.	Parent=CGI_10012588;
	scaffold1585	TRF	Tandem_Repeat	62860	62889	60	+	.	.
scaffold1585	subtractBed	intrn	72897	72941	.	-	.	Parent=CGI_10012588;
	scaffold1585	TRF	Tandem_Repeat	72897	72941	90	+	.	.
scaffold1585	subtractBed	intrn	67652	68137	.	-	.	Parent=CGI_10012588;
	scaffold1585	WUBlastX	LINE_RTE-X	67652	68137	99	+	.	.
scaffold1585	subtractBed	intrn	98211	98253	.	+	.	Parent=CGI_10012589;
	scaffold1585	TRF	Tandem_Repeat	98211	98253	50	+	.	.
scaffold1585	subtractBed	intrn	98425	98466	.	+	.	Parent=CGI_10012589;
	scaffold1585	TRF	Tandem_Repeat	98425	98466	50	+	.	.
scaffold1585	subtractBed	intrn	106435	106551	.	-	.	Parent=CGI_10012590;
	scaffold1585	TRF	Tandem_Repeat	106435	106551	81	+	.	.
scaffold1585	subtractBed	intrn	106445	106517	.	-	.	Parent=CGI_10012590;
	scaffold1585	TRF	Tandem_Repeat	106445	106517	96	+	.	.
scaffold1585	subtractBed	intrn	106435	106551	.	-	.	Parent=CGI_10012590;
	scaffold1585	TRF	Tandem_Repeat	106435	106551	99	+	.	.
scaffold1585	subtractBed	intrn	107761	107826	.	-	.	Parent=CGI_10012590;
	scaffold1585	TRF	Tandem_Repeat	107761	107826	132	+	.	.
scaffold1585	subtractBed	intrn	145496	145606	.	+	.	Parent=CGI_10012592;
	scaffold1585	TRF	Tandem_Repeat	145496	145606	91	+	.	.
scaffold1585	subtractBed	intrn	145497	145559	.	+	.	Parent=CGI_10012592;
	scaffold1585	TRF	Tandem_Repeat	145497	145559	63	+	.	.
scaffold1585	subtractBed	intrn	163197	163703	.	+	.	Parent=CGI_10012593;
	scaffold1585	TRF	Tandem_Repeat	163197	163703	892	+	.	.
scaffold1585	subtractBed	intrn	165635	165713	.	+	.	Parent=CGI_10012593;
	scaffold1585	TRF	Tandem_Repeat	165635	165713	158	+	.	.
scaffold1585	subtractBed	intrn	173740	173865	.	+	.	Parent=CGI_10012594;
	scaffold1585	WUBlastX	LINE_L1-Tx1	173740	173865	36	-	.	.
scaffold1585	subtractBed	intrn	198875	198970	.	-	.	Parent=CGI_10012595;
	scaffold1585	TRF	Tandem_Repeat	198875	198970	124	+	.	.
scaffold1585	subtractBed	intrn	318128	318158	.	-	.	Parent=CGI_10012599;
	scaffold1585	TRF	Tandem_Repeat	318128	318158	53	+	.	.
scaffold1585	subtractBed	intrn	320459	320495	.	-	.	Parent=CGI_10012599;
	scaffold1585	TRF	Tandem_Repeat	320459	320495	74	+	.	.
scaffold1585	subtractBed	intrn	320714	320988	.	-	.	Parent=CGI_10012599;
	scaffold1585	TRF	Tandem_Repeat	320714	320988	266	+	.	.
scaffold1585	subtractBed	intrn	321056	321081	.	-	.	Parent=CGI_10012599;
	scaffold1585	TRF	Tandem_Repeat	321056	321081	52	+	.	.
scaffold1586	subtractBed	intrn	17712	17765	.	+	.	Parent=CGI_10006366;
	scaffold1586	TRF	Tandem_Repeat	17712	17765	58	+	.	.
scaffold1586	subtractBed	intrn	17892	17936	.	+	.	Parent=CGI_10006366;
	scaffold1586	TRF	Tandem_Repeat	17892	17936	90	+	.	.
scaffold1586	subtractBed	intrn	22411	22462	.	+	.	Parent=CGI_10006366;
	scaffold1586	TRF	Tandem_Repeat	22411	22462	95	+	.	.
scaffold1586	subtractBed	intrn	43723	43771	.	+	.	Parent=CGI_10006367;
	scaffold1586	TRF	Tandem_Repeat	43723	43771	98	+	.	.
scaffold1586	subtractBed	intrn	45109	45157	.	+	.	Parent=CGI_10006367;
	scaffold1586	TRF	Tandem_Repeat	45109	45157	98	+	.	.
scaffold1586	subtractBed	intrn	48124	48175	.	+	.	Parent=CGI_10006367;
	scaffold1586	TRF	Tandem_Repeat	48124	48175	52	+	.	.
scaffold1586	subtractBed	intrn	133489	133721	.	-	.	Parent=CGI_10006373;
	scaffold1586	TRF	Tandem_Repeat	133489	133721	315	+	.	.
scaffold1586	subtractBed	intrn	133938	134070	.	-	.	Parent=CGI_10006373;
	scaffold1586	TRF	Tandem_Repeat	133938	134083	249	+	.	.
scaffold1586	subtractBed	intrn	134780	134814	.	-	.	Parent=CGI_10006373;
	scaffold1586	TRF	Tandem_Repeat	134780	134814	54	+	.	.
scaffold1586	subtractBed	intrn	134761	134817	.	-	.	Parent=CGI_10006373;
	scaffold1586	TRF	Tandem_Repeat	134761	134817	54	+	.	.
scaffold1586	subtractBed	intrn	134762	134825	.	-	.	Parent=CGI_10006373;
	scaffold1586	TRF	Tandem_Repeat	134762	134825	56	+	.	.
scaffold1586	subtractBed	intrn	145040	145096	.	-	.	Parent=CGI_10006374;
	scaffold1586	TRF	Tandem_Repeat	145040	145096	55	+	.	.
scaffold1586	subtractBed	intrn	147164	147221	.	-	.	Parent=CGI_10006374;
	scaffold1586	TRF	Tandem_Repeat	147164	147221	107	+	.	.
scaffold1586	subtractBed	intrn	149131	149292	.	-	.	Parent=CGI_10006374;
	scaffold1586	TRF	Tandem_Repeat	149131	149292	274	+	.	.
scaffold1588	subtractBed	intrn	69314	69354	.	-	.	Parent=CGI_10014772;
	scaffold1588	TRF	Tandem_Repeat	69314	69354	57	+	.	.
scaffold1588	subtractBed	intrn	75733	75921	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	75733	75921	41	+	.	.
scaffold1588	subtractBed	intrn	71969	72565	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_L1	71969	72565	83	+	.	.
scaffold1588	subtractBed	intrn	71729	72427	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	71729	72427	160	+	.	.
scaffold1588	subtractBed	intrn	71855	72454	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	71855	72454	203	+	.	.
scaffold1588	subtractBed	intrn	74325	74780	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	74325	74780	163	+	.	.
scaffold1588	subtractBed	intrn	75595	75903	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_I	75595	75903	31	+	.	.
scaffold1588	subtractBed	intrn	75733	75993	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	75733	75993	28	+	.	.
scaffold1588	subtractBed	intrn	74421	74927	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_L1?	74421	74927	22	+	.	.
scaffold1588	subtractBed	intrn	71969	72430	.	-	.	Parent=CGI_10014772;
	scaffold1588	WUBlastX	LINE_RTE-X	71969	72430	230	+	.	.
scaffold1588	subtractBed	intrn	201038	201298	.	+	.	Parent=CGI_10014777;
	scaffold1588	TRF	Tandem_Repeat	201038	201298	330	+	.	.
scaffold1588	subtractBed	intrn	213693	213729	.	-	.	Parent=CGI_10014779;
	scaffold1588	TRF	Tandem_Repeat	213693	213729	74	+	.	.
scaffold1588	subtractBed	intrn	237512	237711	.	+	.	Parent=CGI_10014781;
	scaffold1588	TRF	Tandem_Repeat	237512	237711	220	+	.	.
scaffold1588	subtractBed	intrn	240388	241344	.	+	.	Parent=CGI_10014781;
	scaffold1588	TRF	Tandem_Repeat	240388	241344	1212	+	.	.
scaffold1588	subtractBed	intrn	241517	241559	.	+	.	Parent=CGI_10014781;
	scaffold1588	TRF	Tandem_Repeat	241517	241559	68	+	.	.
scaffold1588	subtractBed	intrn	323503	323802	.	-	.	Parent=CGI_10014790;
	scaffold1588	WUBlastX	DNA_TcMar-m44	323503	323802	185	-	.	.
scaffold1589	subtractBed	intrn	15138	15172	.	+	.	Parent=CGI_10024102;
	scaffold1589	TRF	Tandem_Repeat	15138	15172	70	+	.	.
scaffold1589	subtractBed	intrn	15437	15485	.	+	.	Parent=CGI_10024102;
	scaffold1589	TRF	Tandem_Repeat	15437	15485	75	+	.	.
scaffold1589	subtractBed	intrn	35156	35186	.	-	.	Parent=CGI_10024104;
	scaffold1589	TRF	Tandem_Repeat	35156	35186	62	+	.	.
scaffold1589	subtractBed	intrn	86914	87400	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	86914	87400	681	+	.	.
scaffold1589	subtractBed	intrn	89881	90086	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	89881	90086	335	+	.	.
scaffold1589	subtractBed	intrn	95520	96192	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	95520	96192	672	+	.	.
scaffold1589	subtractBed	intrn	95520	96192	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	95520	96192	1024	+	.	.
scaffold1589	subtractBed	intrn	97571	98448	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	97571	98448	1388	+	.	.
scaffold1589	subtractBed	intrn	97571	98448	.	+	.	Parent=CGI_10024106;
	scaffold1589	TRF	Tandem_Repeat	97571	98448	1382	+	.	.
scaffold1589	subtractBed	intrn	112005	112072	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	112005	112072	136	+	.	.
scaffold1589	subtractBed	intrn	117023	117098	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	117023	117098	152	+	.	.
scaffold1589	subtractBed	intrn	124738	125768	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	124738	125768	1540	+	.	.
scaffold1589	subtractBed	intrn	126680	126721	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	126680	126721	84	+	.	.
scaffold1589	subtractBed	intrn	129042	129221	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	129042	129221	216	+	.	.
scaffold1589	subtractBed	intrn	129042	129221	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	129042	129221	148	+	.	.
scaffold1589	subtractBed	intrn	128562	129008	.	+	.	Parent=CGI_10024108;
	scaffold1589	WUBlastX	LINE_Penelope	128562	129008	79	+	.	.
scaffold1589	subtractBed	intrn	128421	129014	.	+	.	Parent=CGI_10024108;
	scaffold1589	WUBlastX	LINE_Penelope	128421	129014	63	+	.	.
scaffold1589	subtractBed	intrn	129817	129903	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	129817	129903	113	+	.	.
scaffold1589	subtractBed	intrn	131896	131997	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	131896	131997	132	+	.	.
scaffold1589	subtractBed	intrn	131894	132055	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	131894	132055	101	+	.	.
scaffold1589	subtractBed	intrn	132057	132222	.	+	.	Parent=CGI_10024108;
	scaffold1589	TRF	Tandem_Repeat	132057	132222	172	+	.	.
scaffold1589	subtractBed	intrn	283592	285142	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy	283592	285142	113	-	.	.
scaffold1589	subtractBed	intrn	284669	285253	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy-Cigr	284669	285253	139	-	.	.
scaffold1589	subtractBed	intrn	284600	285136	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy-Cigr	284600	285136	147	-	.	.
scaffold1589	subtractBed	intrn	280773	282626	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy	280773	282626	1075	-	.	.
scaffold1589	subtractBed	intrn	282617	284251	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy-Cigr	282617	284251	888	-	.	.
scaffold1589	subtractBed	intrn	280536	282038	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Gypsy	280536	282038	464	-	.	.
scaffold1589	subtractBed	intrn	280515	280574	.	-	.	Parent=CGI_10024110;
	scaffold1589	WUBlastX	LTR_Copia	280515	280574	28	-	.	.
scaffold1589	subtractBed	intrn	309301	309325	.	-	.	Parent=CGI_10024111;
	scaffold1589	TRF	Tandem_Repeat	309301	309325	50	+	.	.
scaffold1589	subtractBed	intrn	311917	312066	.	-	.	Parent=CGI_10024111;
	scaffold1589	TRF	Tandem_Repeat	311917	312066	273	+	.	.
scaffold1589	subtractBed	intrn	324874	324904	.	+	.	Parent=CGI_10024112;
	scaffold1589	TRF	Tandem_Repeat	324874	324904	62	+	.	.
scaffold1589	subtractBed	intrn	334870	335025	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	334870	335025	244	+	.	.
scaffold1589	subtractBed	intrn	340840	340888	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	340840	340888	98	+	.	.
scaffold1589	subtractBed	intrn	342780	343028	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	342778	343028	421	+	.	.
scaffold1589	subtractBed	intrn	345975	346046	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	345975	346046	144	+	.	.
scaffold1589	subtractBed	intrn	346647	346709	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	346647	346709	119	+	.	.
scaffold1589	subtractBed	intrn	351541	351581	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	351541	351581	82	+	.	.
scaffold1589	subtractBed	intrn	352114	352165	.	-	.	Parent=CGI_10024113;
	scaffold1589	TRF	Tandem_Repeat	352114	352165	104	+	.	.
scaffold1589	subtractBed	intrn	360363	360448	.	+	.	Parent=CGI_10024114;
	scaffold1589	TRF	Tandem_Repeat	360363	360448	86	+	.	.
scaffold1589	subtractBed	intrn	380772	381461	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1	380772	381461	93	+	.	.
scaffold1589	subtractBed	intrn	379966	380031	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1-Tx1	379966	380031	21	+	.	.
scaffold1589	subtractBed	intrn	380546	380629	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1	380546	380629	25	+	.	.
scaffold1589	subtractBed	intrn	380628	381257	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1-Tx1	380628	381257	301	+	.	.
scaffold1589	subtractBed	intrn	381478	381546	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1	381478	381546	22	+	.	.
scaffold1589	subtractBed	intrn	380576	380629	.	+	.	Parent=CGI_10024115;
	scaffold1589	WUBlastX	LINE_L1	380576	380629	27	+	.	.
scaffold1589	subtractBed	intrn	388808	388875	.	+	.	Parent=CGI_10024115;
	scaffold1589	TRF	Tandem_Repeat	388808	388875	70	+	.	.
scaffold1589	subtractBed	intrn	397903	398025	.	-	.	Parent=CGI_10024116;
	scaffold1589	TRF	Tandem_Repeat	397903	398025	69	+	.	.
scaffold1589	subtractBed	intrn	397902	398194	.	-	.	Parent=CGI_10024116;
	scaffold1589	TRF	Tandem_Repeat	397902	398194	496	+	.	.
scaffold1589	subtractBed	intrn	398018	398139	.	-	.	Parent=CGI_10024116;
	scaffold1589	TRF	Tandem_Repeat	398018	398139	76	+	.	.
scaffold1589	subtractBed	intrn	491178	491213	.	-	.	Parent=CGI_10024119;
	scaffold1589	TRF	Tandem_Repeat	491178	491213	63	+	.	.
scaffold1589	subtractBed	intrn	556004	556034	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	556004	556034	53	+	.	.
scaffold1589	subtractBed	intrn	556524	556681	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	556524	556681	201	+	.	.
scaffold1589	subtractBed	intrn	556552	556684	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	556552	556684	91	+	.	.
scaffold1589	subtractBed	intrn	556528	556686	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	556528	556686	237	+	.	.
scaffold1589	subtractBed	intrn	556528	556686	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	556528	556686	183	+	.	.
scaffold1589	subtractBed	intrn	559860	559917	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	559860	559917	116	+	.	.
scaffold1589	subtractBed	intrn	566754	566834	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	566754	566834	153	+	.	.
scaffold1589	subtractBed	intrn	568512	569113	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	568510	569113	778	+	.	.
scaffold1589	subtractBed	intrn	570626	570663	.	+	.	Parent=CGI_10024120;
	scaffold1589	TRF	Tandem_Repeat	570626	570663	76	+	.	.
scaffold1589	subtractBed	intrn	594962	595057	.	-	.	Parent=CGI_10024122;
	scaffold1589	WUBlastX	LTR_Gypsy-Cigr	594962	595057	51	+	.	.
scaffold1589	subtractBed	intrn	593825	595015	.	-	.	Parent=CGI_10024122;
	scaffold1589	WUBlastX	LTR_Gypsy	593825	595015	961	+	.	.
scaffold1589	subtractBed	intrn	595315	595395	.	-	.	Parent=CGI_10024122;
	scaffold1589	WUBlastX	LTR_Copia	595315	595395	26	+	.	.
scaffold1589	subtractBed	intrn	594935	595033	.	-	.	Parent=CGI_10024122;
	scaffold1589	WUBlastX	LTR_Gypsy-Cigr	594935	595033	51	+	.	.
scaffold1589	subtractBed	intrn	593760	593903	.	-	.	Parent=CGI_10024122;
	scaffold1589	WUBlastX	LTR_Copia	593760	593903	23	+	.	.
scaffold1589	subtractBed	intrn	615610	615650	.	+	.	Parent=CGI_10024124;
	scaffold1589	TRF	Tandem_Repeat	615610	615650	82	+	.	.
scaffold1589	subtractBed	intrn	633929	633979	.	-	.	Parent=CGI_10024125;
	scaffold1589	TRF	Tandem_Repeat	633929	633979	102	+	.	.
scaffold1589	subtractBed	intrn	771909	772042	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	771909	772042	83	+	.	.
scaffold1589	subtractBed	intrn	773031	773147	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	773031	773147	100	+	.	.
scaffold1589	subtractBed	intrn	778082	778129	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	778082	778129	96	+	.	.
scaffold1589	subtractBed	intrn	780585	780614	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	780585	780614	60	+	.	.
scaffold1589	subtractBed	intrn	780868	780906	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	780868	780906	69	+	.	.
scaffold1589	subtractBed	intrn	781747	781814	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	781747	781814	136	+	.	.
scaffold1589	subtractBed	intrn	782729	782760	.	+	.	Parent=CGI_10024129;
	scaffold1589	TRF	Tandem_Repeat	782729	782760	64	+	.	.
scaffold1589	subtractBed	intrn	882015	882254	.	-	.	Parent=CGI_10024131;
	scaffold1589	WUBlastX	LINE_CR1-L2	882015	882254	32	+	.	.
scaffold1590	subtractBed	intrn	121787	122014	.	-	.	Parent=CGI_10005511;
	scaffold1590	WUBlastX	LINE_Penelope	121787	122014	73	+	.	.
scaffold1592	subtractBed	intrn	17522	18012	.	+	.	Parent=CGI_10006584;
	scaffold1592	TRF	Tandem_Repeat	17522	18012	684	+	.	.
scaffold1592	subtractBed	intrn	21434	21493	.	+	.	Parent=CGI_10006584;
	scaffold1592	TRF	Tandem_Repeat	21434	21493	111	+	.	.
scaffold1592	subtractBed	intrn	22886	23188	.	+	.	Parent=CGI_10006584;
	scaffold1592	TRF	Tandem_Repeat	22886	23188	245	+	.	.
scaffold1592	subtractBed	intrn	23434	23581	.	+	.	Parent=CGI_10006584;
	scaffold1592	TRF	Tandem_Repeat	23434	23581	172	+	.	.
scaffold1592	subtractBed	intrn	40219	40260	.	+	.	Parent=CGI_10006586;
	scaffold1592	TRF	Tandem_Repeat	40219	40260	84	+	.	.
scaffold1592	subtractBed	intrn	40519	40806	.	+	.	Parent=CGI_10006586;
	scaffold1592	TRF	Tandem_Repeat	40519	40806	319	+	.	.
scaffold1592	subtractBed	intrn	46559	46595	.	+	.	Parent=CGI_10006586;
	scaffold1592	TRF	Tandem_Repeat	46559	46595	74	+	.	.
scaffold1592	subtractBed	intrn	51168	51323	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	51168	51323	258	+	.	.
scaffold1592	subtractBed	intrn	61057	61109	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	61057	61109	74	+	.	.
scaffold1592	subtractBed	intrn	65266	65324	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	65266	65324	118	+	.	.
scaffold1592	subtractBed	intrn	67711	67811	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	67711	67811	130	+	.	.
scaffold1592	subtractBed	intrn	69611	69647	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	69611	69647	65	+	.	.
scaffold1592	subtractBed	intrn	69721	69761	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	69721	69761	64	+	.	.
scaffold1592	subtractBed	intrn	75173	75236	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	75173	75236	128	+	.	.
scaffold1592	subtractBed	intrn	76138	76170	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	76138	76170	66	+	.	.
scaffold1592	subtractBed	intrn	77430	77458	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	77430	77458	58	+	.	.
scaffold1592	subtractBed	intrn	77456	77505	.	-	.	Parent=CGI_10006587;
	scaffold1592	TRF	Tandem_Repeat	77456	77505	100	+	.	.
scaffold1592	subtractBed	intrn	113471	113649	.	+	.	Parent=CGI_10006588;
	scaffold1592	TRF	Tandem_Repeat	113471	113682	222	+	.	.
scaffold1592	subtractBed	intrn	146612	148173	.	-	.	Parent=CGI_10006592;
	scaffold1592	TRF	Tandem_Repeat	146612	148173	2040	+	.	.
scaffold1592	subtractBed	intrn	147027	148173	.	-	.	Parent=CGI_10006592;
	scaffold1592	TRF	Tandem_Repeat	147027	148173	1814	+	.	.
scaffold1596	subtractBed	intrn	6552	6573	.	+	.	Parent=CGI_10000647;
	scaffold1596	WUBlastX	DNA_Crypton	6552	7001	61	+	.	.
scaffold1597	subtractBed	intrn	2304	3287	.	-	.	Parent=CGI_10011762;
	scaffold1597	WUBlastX	DNA_hAT-Tip100	2304	3287	147	-	.	.
scaffold1597	subtractBed	intrn	3153	3533	.	-	.	Parent=CGI_10011762;
	scaffold1597	WUBlastX	DNA_hAT-Tip100	3153	3533	23	-	.	.
scaffold1597	subtractBed	intrn	3111	3440	.	-	.	Parent=CGI_10011762;
	scaffold1597	WUBlastX	DNA_hAT-Tip100	3111	3440	151	-	.	.
scaffold1597	subtractBed	intrn	24208	24254	.	-	.	Parent=CGI_10011763;
	scaffold1597	TRF	Tandem_Repeat	24208	24254	58	+	.	.
scaffold1597	subtractBed	intrn	24208	24254	.	+	.	Parent=CGI_10011764;
	scaffold1597	TRF	Tandem_Repeat	24208	24254	58	+	.	.
scaffold1597	subtractBed	intrn	34557	34739	.	-	.	Parent=CGI_10011765;
	scaffold1597	TRF	Tandem_Repeat	34557	34739	303	+	.	.
scaffold1597	subtractBed	intrn	37687	37786	.	-	.	Parent=CGI_10011766;
	scaffold1597	TRF	Tandem_Repeat	37687	37786	96	+	.	.
scaffold1597	subtractBed	intrn	72327	72794	.	-	.	Parent=CGI_10011769;
	scaffold1597	WUBlastX	LINE_RTE-X	72327	72794	112	+	.	.
scaffold1597	subtractBed	intrn	74552	74588	.	-	.	Parent=CGI_10011769;
	scaffold1597	TRF	Tandem_Repeat	74552	74588	56	+	.	.
scaffold1597	subtractBed	intrn	77331	77550	.	-	.	Parent=CGI_10011769;
	scaffold1597	TRF	Tandem_Repeat	77331	77550	305	+	.	.
scaffold1597	subtractBed	intrn	81124	81167	.	-	.	Parent=CGI_10011769;
	scaffold1597	TRF	Tandem_Repeat	81124	81167	81	+	.	.
scaffold1597	subtractBed	intrn	87586	87627	.	+	.	Parent=CGI_10011770;
	scaffold1597	TRF	Tandem_Repeat	87586	87627	75	+	.	.
scaffold1597	subtractBed	intrn	93411	94032	.	+	.	Parent=CGI_10011770;
	scaffold1597	TRF	Tandem_Repeat	93411	94032	632	+	.	.
scaffold1597	subtractBed	intrn	93684	93724	.	+	.	Parent=CGI_10011770;
	scaffold1597	TRF	Tandem_Repeat	93684	93724	66	+	.	.
scaffold1597	subtractBed	intrn	105410	106332	.	-	.	Parent=CGI_10011771;
	scaffold1597	TRF	Tandem_Repeat	105410	106332	1393	+	.	.
scaffold1597	subtractBed	intrn	106663	106810	.	-	.	Parent=CGI_10011771;
	scaffold1597	TRF	Tandem_Repeat	106663	106810	80	+	.	.
scaffold1597	subtractBed	intrn	250279	250319	.	+	.	Parent=CGI_10011776;
	scaffold1597	TRF	Tandem_Repeat	250279	250319	64	+	.	.
scaffold1597	subtractBed	intrn	250802	250870	.	+	.	Parent=CGI_10011776;
	scaffold1597	TRF	Tandem_Repeat	250802	250870	138	+	.	.
scaffold1597	subtractBed	intrn	253133	253180	.	+	.	Parent=CGI_10011776;
	scaffold1597	TRF	Tandem_Repeat	253133	253180	96	+	.	.
scaffold1597	subtractBed	intrn	256156	256218	.	+	.	Parent=CGI_10011776;
	scaffold1597	TRF	Tandem_Repeat	256156	256218	126	+	.	.
scaffold1597	subtractBed	intrn	257238	257288	.	+	.	Parent=CGI_10011776;
	scaffold1597	TRF	Tandem_Repeat	257238	257288	102	+	.	.
scaffold1599	subtractBed	intrn	6992	7427	.	+	.	Parent=CGI_10027125;
	scaffold1599	TRF	Tandem_Repeat	6992	7427	276	+	.	.
scaffold1599	subtractBed	intrn	13201	13247	.	-	.	Parent=CGI_10027126;
	scaffold1599	TRF	Tandem_Repeat	13201	13247	94	+	.	.
scaffold1599	subtractBed	intrn	13245	13270	.	-	.	Parent=CGI_10027126;
	scaffold1599	TRF	Tandem_Repeat	13245	13270	52	+	.	.
scaffold1599	subtractBed	intrn	16935	17090	.	-	.	Parent=CGI_10027127;
	scaffold1599	TRF	Tandem_Repeat	16935	17090	269	+	.	.
scaffold1599	subtractBed	intrn	46806	46866	.	+	.	Parent=CGI_10027130;
	scaffold1599	TRF	Tandem_Repeat	46806	46866	122	+	.	.
scaffold1599	subtractBed	intrn	75514	75802	.	+	.	Parent=CGI_10027130;
	scaffold1599	TRF	Tandem_Repeat	75514	75802	213	+	.	.
scaffold1599	subtractBed	intrn	75531	75792	.	+	.	Parent=CGI_10027130;
	scaffold1599	TRF	Tandem_Repeat	75531	75792	333	+	.	.
scaffold1599	subtractBed	intrn	106177	106204	.	+	.	Parent=CGI_10027132;
	scaffold1599	TRF	Tandem_Repeat	106177	106204	56	+	.	.
scaffold1599	subtractBed	intrn	117126	117166	.	+	.	Parent=CGI_10027132;
	scaffold1599	TRF	Tandem_Repeat	117126	117166	82	+	.	.
scaffold1599	subtractBed	intrn	123195	124139	.	-	.	Parent=CGI_10027133;
	scaffold1599	TRF	Tandem_Repeat	123195	124139	1487	+	.	.
scaffold1599	subtractBed	intrn	126822	126959	.	-	.	Parent=CGI_10027133;
	scaffold1599	TRF	Tandem_Repeat	126822	126959	116	+	.	.
scaffold1599	subtractBed	intrn	144207	145980	.	-	.	Parent=CGI_10027134;
	scaffold1599	TRF	Tandem_Repeat	144207	145980	1791	+	.	.
scaffold1599	subtractBed	intrn	146612	146654	.	-	.	Parent=CGI_10027134;
	scaffold1599	TRF	Tandem_Repeat	146612	146654	77	+	.	.
scaffold1599	subtractBed	intrn	147974	148031	.	-	.	Parent=CGI_10027134;
	scaffold1599	TRF	Tandem_Repeat	147974	148031	116	+	.	.
scaffold1599	subtractBed	intrn	171124	171163	.	-	.	Parent=CGI_10027135;
	scaffold1599	TRF	Tandem_Repeat	171124	171163	80	+	.	.
scaffold1599	subtractBed	intrn	189363	189387	.	-	.	Parent=CGI_10027137;
	scaffold1599	TRF	Tandem_Repeat	189363	189387	50	+	.	.
scaffold1599	subtractBed	intrn	208848	208913	.	-	.	Parent=CGI_10027141;
	scaffold1599	WUBlastX	DNA_Sola	208848	208913	21	+	.	.
scaffold1599	subtractBed	intrn	208582	208713	.	-	.	Parent=CGI_10027141;
	scaffold1599	WUBlastX	DNA_Sola	208582	208713	61	+	.	.
scaffold1599	subtractBed	intrn	208582	208692	.	-	.	Parent=CGI_10027141;
	scaffold1599	WUBlastX	DNA_Sola	208582	208692	67	+	.	.
scaffold1599	subtractBed	intrn	213608	213652	.	-	.	Parent=CGI_10027141;
	scaffold1599	TRF	Tandem_Repeat	213608	213652	90	+	.	.
scaffold1599	subtractBed	intrn	214887	215636	.	-	.	Parent=CGI_10027141;
	scaffold1599	WUBlastX	LTR_Gypsy	214887	215636	196	+	.	.
scaffold1599	subtractBed	intrn	214866	215900	.	-	.	Parent=CGI_10027141;
	scaffold1599	WUBlastX	LTR_Gypsy	214866	215900	160	+	.	.
scaffold1599	subtractBed	intrn	228793	228833	.	-	.	Parent=CGI_10027142;
	scaffold1599	TRF	Tandem_Repeat	228793	228833	55	+	.	.
scaffold1599	subtractBed	intrn	230771	230810	.	-	.	Parent=CGI_10027142;
	scaffold1599	TRF	Tandem_Repeat	230771	230810	71	+	.	.
scaffold1599	subtractBed	intrn	241792	241843	.	-	.	Parent=CGI_10027143;
	scaffold1599	TRF	Tandem_Repeat	241792	241843	104	+	.	.
scaffold1599	subtractBed	intrn	239899	240027	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	239899	240027	22	-	.	.
scaffold1599	subtractBed	intrn	239923	240117	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	239923	240117	66	-	.	.
scaffold1599	subtractBed	intrn	240492	240887	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	240492	240887	102	-	.	.
scaffold1599	subtractBed	intrn	240516	240743	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	240516	240743	138	-	.	.
scaffold1599	subtractBed	intrn	240504	240791	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	240504	240791	137	-	.	.
scaffold1599	subtractBed	intrn	239974	240513	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LTR_Gypsy	239974	240513	172	-	.	.
scaffold1599	subtractBed	intrn	246612	246650	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LINE_Penelope	246612	246650	21	-	.	.
scaffold1599	subtractBed	intrn	246074	246589	.	-	.	Parent=CGI_10027143;
	scaffold1599	WUBlastX	LINE_Penelope	246074	246589	57	-	.	.
scaffold1599	subtractBed	intrn	366700	366741	.	+	.	Parent=CGI_10027146;
	scaffold1599	TRF	Tandem_Repeat	366700	366741	84	+	.	.
scaffold1599	subtractBed	intrn	543392	543442	.	+	.	Parent=CGI_10027151;
	scaffold1599	TRF	Tandem_Repeat	543392	543442	102	+	.	.
scaffold1599	subtractBed	intrn	543062	543208	.	+	.	Parent=CGI_10027151;
	scaffold1599	WUBlastX	LINE_RTE-X	543062	543208	34	+	.	.
scaffold1599	subtractBed	intrn	546984	547175	.	+	.	Parent=CGI_10027151;
	scaffold1599	WUBlastX	LINE_L1-Tx1	546984	547175	69	+	.	.
scaffold1599	subtractBed	intrn	546981	547286	.	+	.	Parent=CGI_10027151;
	scaffold1599	WUBlastX	LINE_L1-Tx1	546981	547286	31	+	.	.
scaffold1599	subtractBed	intrn	546942	547148	.	+	.	Parent=CGI_10027151;
	scaffold1599	WUBlastX	LINE_L1	546942	547148	30	+	.	.
scaffold1599	subtractBed	intrn	556940	557020	.	+	.	Parent=CGI_10027152;
	scaffold1599	WUBlastX	DNA_IS4EU	556940	557020	43	+	.	.
scaffold1599	subtractBed	intrn	559400	560143	.	+	.	Parent=CGI_10027152;
	scaffold1599	WUBlastX	DNA_IS4EU	559400	560143	343	-	.	.
scaffold1599	subtractBed	intrn	558205	558291	.	+	.	Parent=CGI_10027152;
	scaffold1599	WUBlastX	DNA_IS4EU	558205	558291	39	+	.	.
scaffold1599	subtractBed	intrn	558411	558614	.	+	.	Parent=CGI_10027152;
	scaffold1599	WUBlastX	DNA_IS4EU	558411	558614	83	+	.	.
scaffold1599	subtractBed	intrn	631116	631265	.	+	.	Parent=CGI_10027154;
	scaffold1599	WUBlastX	LINE_Penelope	631116	631265	56	+	.	.
scaffold1599	subtractBed	intrn	680040	680354	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LINE_CR1-L2	680040	680354	56	+	.	.
scaffold1599	subtractBed	intrn	678194	679579	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LTR_Gypsy	678194	679579	939	-	.	.
scaffold1599	subtractBed	intrn	678293	679456	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LTR_Gypsy	678293	679456	1110	-	.	.
scaffold1599	subtractBed	intrn	680142	680354	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LINE_L2	680142	680354	69	+	.	.
scaffold1599	subtractBed	intrn	676605	677252	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LTR_Gypsy-Cigr	676605	677252	133	-	.	.
scaffold1599	subtractBed	intrn	677263	678168	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LTR_Gypsy	677263	678168	689	-	.	.
scaffold1599	subtractBed	intrn	677122	678039	.	-	.	Parent=CGI_10027155;
	scaffold1599	WUBlastX	LTR_Gypsy	677122	678039	438	-	.	.
scaffold1599	subtractBed	intrn	900919	900964	.	-	.	Parent=CGI_10027165;
	scaffold1599	TRF	Tandem_Repeat	900919	900964	83	+	.	.
scaffold1599	subtractBed	intrn	913095	913182	.	-	.	Parent=CGI_10027165;
	scaffold1599	TRF	Tandem_Repeat	913095	913182	176	+	.	.
scaffold1599	subtractBed	intrn	917598	917638	.	-	.	Parent=CGI_10027166;
	scaffold1599	TRF	Tandem_Repeat	917598	917638	82	+	.	.
scaffold1599	subtractBed	intrn	918019	918052	.	-	.	Parent=CGI_10027166;
	scaffold1599	TRF	Tandem_Repeat	918019	918052	68	+	.	.
scaffold1599	subtractBed	intrn	928135	928405	.	-	.	Parent=CGI_10027167;
	scaffold1599	TRF	Tandem_Repeat	928135	928405	260	+	.	.
scaffold1599	subtractBed	intrn	973022	973065	.	-	.	Parent=CGI_10027170;
	scaffold1599	TRF	Tandem_Repeat	973022	973065	56	+	.	.
scaffold1599	subtractBed	intrn	973013	973063	.	-	.	Parent=CGI_10027170;
	scaffold1599	TRF	Tandem_Repeat	973013	973063	52	+	.	.
scaffold1599	subtractBed	intrn	1002323	1002474	.	+	.	Parent=CGI_10027171;
	scaffold1599	TRF	Tandem_Repeat	1002323	1002474	164	+	.	.
scaffold1599	subtractBed	intrn	1053869	1054715	.	+	.	Parent=CGI_10027172;
	scaffold1599	TRF	Tandem_Repeat	1053869	1054715	1299	+	.	.
scaffold1599	subtractBed	intrn	1063626	1063686	.	+	.	Parent=CGI_10027173;
	scaffold1599	TRF	Tandem_Repeat	1063626	1063686	122	+	.	.
scaffold1599	subtractBed	intrn	1067370	1067539	.	+	.	Parent=CGI_10027173;
	scaffold1599	TRF	Tandem_Repeat	1067370	1067539	164	+	.	.
scaffold1599	subtractBed	intrn	1080119	1080265	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1080119	1080265	68	+	.	.
scaffold1599	subtractBed	intrn	1080141	1080259	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1080141	1080259	61	+	.	.
scaffold1599	subtractBed	intrn	1080178	1080303	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1080178	1080303	94	+	.	.
scaffold1599	subtractBed	intrn	1080329	1080384	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1080329	1080384	55	+	.	.
scaffold1599	subtractBed	intrn	1086445	1086561	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1086445	1086561	73	+	.	.
scaffold1599	subtractBed	intrn	1086445	1086561	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1086445	1086561	65	+	.	.
scaffold1599	subtractBed	intrn	1086446	1086559	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1086446	1086559	126	+	.	.
scaffold1599	subtractBed	intrn	1092233	1094306	.	+	.	Parent=CGI_10027176;
	scaffold1599	TRF	Tandem_Repeat	1092233	1094306	2416	+	.	.
scaffold1599	subtractBed	intrn	1096786	1096870	.	-	.	Parent=CGI_10027177;
	scaffold1599	TRF	Tandem_Repeat	1096786	1096870	134	+	.	.
scaffold1599	subtractBed	intrn	1115130	1115171	.	+	.	Parent=CGI_10027180;
	scaffold1599	TRF	Tandem_Repeat	1115130	1115171	84	+	.	.
scaffold1599	subtractBed	intrn	1119341	1119372	.	+	.	Parent=CGI_10027180;
	scaffold1599	TRF	Tandem_Repeat	1119341	1119372	64	+	.	.
scaffold1599	subtractBed	intrn	1146967	1147060	.	+	.	Parent=CGI_10027182;
	scaffold1599	TRF	Tandem_Repeat	1146967	1147060	80	+	.	.
scaffold1599	subtractBed	intrn	1147160	1147278	.	+	.	Parent=CGI_10027182;
	scaffold1599	TRF	Tandem_Repeat	1147160	1147278	105	+	.	.
scaffold1599	subtractBed	intrn	1147327	1147468	.	+	.	Parent=CGI_10027182;
	scaffold1599	TRF	Tandem_Repeat	1147327	1147468	142	+	.	.
scaffold1599	subtractBed	intrn	1146810	1146929	.	+	.	Parent=CGI_10027182;
	scaffold1599	TRF	Tandem_Repeat	1146810	1146929	98	+	.	.
scaffold1599	subtractBed	intrn	1165102	1165135	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1165102	1165135	68	+	.	.
scaffold1599	subtractBed	intrn	1182594	1182725	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1182594	1182725	171	+	.	.
scaffold1599	subtractBed	intrn	1182862	1182933	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1182862	1182933	65	+	.	.
scaffold1599	subtractBed	intrn	1184169	1184848	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1184169	1184848	134	+	.	.
scaffold1599	subtractBed	intrn	1185034	1185128	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185034	1185128	68	+	.	.
scaffold1599	subtractBed	intrn	1185288	1185400	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185288	1185400	100	+	.	.
scaffold1599	subtractBed	intrn	1185288	1185400	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185288	1185400	126	+	.	.
scaffold1599	subtractBed	intrn	1185539	1185630	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185539	1185630	62	+	.	.
scaffold1599	subtractBed	intrn	1185796	1186001	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185796	1186001	157	+	.	.
scaffold1599	subtractBed	intrn	1185796	1185994	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1185796	1185994	136	+	.	.
scaffold1599	subtractBed	intrn	1190627	1190666	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1190627	1190666	80	+	.	.
scaffold1599	subtractBed	intrn	1190826	1190870	.	+	.	Parent=CGI_10027183;
	scaffold1599	TRF	Tandem_Repeat	1190826	1190870	90	+	.	.
scaffold1599	subtractBed	intrn	1218501	1218549	.	-	.	Parent=CGI_10027185;
	scaffold1599	TRF	Tandem_Repeat	1218501	1218549	98	+	.	.
scaffold1599	subtractBed	intrn	1278188	1278306	.	+	.	Parent=CGI_10027189;
	scaffold1599	TRF	Tandem_Repeat	1278188	1278306	127	+	.	.
scaffold1599	subtractBed	intrn	1280661	1280745	.	+	.	Parent=CGI_10027189;
	scaffold1599	TRF	Tandem_Repeat	1280661	1280745	149	+	.	.
scaffold160	subtractBed	intrn	72495	72965	.	+	.	Parent=CGI_10020572;
	scaffold160	TRF	Tandem_Repeat	72495	72965	378	+	.	.
scaffold160	subtractBed	intrn	74820	75030	.	+	.	Parent=CGI_10020572;
	scaffold160	TRF	Tandem_Repeat	74820	75030	145	+	.	.
scaffold160	subtractBed	intrn	75254	75542	.	+	.	Parent=CGI_10020572;
	scaffold160	TRF	Tandem_Repeat	75254	75558	243	+	.	.
scaffold160	subtractBed	intrn	183234	183444	.	-	.	Parent=CGI_10020578;
	scaffold160	TRF	Tandem_Repeat	183234	183444	171	+	.	.
scaffold160	subtractBed	intrn	180788	181768	.	-	.	Parent=CGI_10020578;
	scaffold160	WUBlastX	LINE_RTE-X	180788	181768	214	-	.	.
scaffold160	subtractBed	intrn	180566	181765	.	-	.	Parent=CGI_10020578;
	scaffold160	WUBlastX	LINE_RTE-X	180566	181765	173	-	.	.
scaffold160	subtractBed	intrn	187716	188057	.	-	.	Parent=CGI_10020578;
	scaffold160	TRF	Tandem_Repeat	187716	188057	395	+	.	.
scaffold160	subtractBed	intrn	204454	204495	.	-	.	Parent=CGI_10020578;
	scaffold160	TRF	Tandem_Repeat	204454	204495	59	+	.	.
scaffold160	subtractBed	intrn	204454	204496	.	-	.	Parent=CGI_10020578;
	scaffold160	TRF	Tandem_Repeat	204454	204496	63	+	.	.
scaffold160	subtractBed	intrn	211413	211468	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	211413	211468	112	+	.	.
scaffold160	subtractBed	intrn	213303	213731	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	213303	213731	334	+	.	.
scaffold160	subtractBed	intrn	213303	213731	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	213303	213731	347	+	.	.
scaffold160	subtractBed	intrn	215871	215951	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	215871	215951	81	+	.	.
scaffold160	subtractBed	intrn	215872	215951	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	215872	215951	78	+	.	.
scaffold160	subtractBed	intrn	216012	216078	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	216012	216078	134	+	.	.
scaffold160	subtractBed	intrn	220530	220631	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	220530	220631	145	+	.	.
scaffold160	subtractBed	intrn	220527	220633	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	220527	220633	137	+	.	.
scaffold160	subtractBed	intrn	225051	225914	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	225051	225914	186	+	.	.
scaffold160	subtractBed	intrn	225499	225605	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	225499	225605	94	+	.	.
scaffold160	subtractBed	intrn	225498	225913	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	225498	225913	240	+	.	.
scaffold160	subtractBed	intrn	225405	225915	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	225405	225915	306	+	.	.
scaffold160	subtractBed	intrn	226565	226621	.	-	.	Parent=CGI_10020579;
	scaffold160	TRF	Tandem_Repeat	226565	226621	105	+	.	.
scaffold160	subtractBed	intrn	246956	247281	.	-	.	Parent=CGI_10020581;
	scaffold160	TRF	Tandem_Repeat	246956	247285	597	+	.	.
scaffold160	subtractBed	intrn	258020	258196	.	-	.	Parent=CGI_10020581;
	scaffold160	TRF	Tandem_Repeat	258020	258196	336	+	.	.
scaffold160	subtractBed	intrn	258780	258915	.	-	.	Parent=CGI_10020581;
	scaffold160	TRF	Tandem_Repeat	258780	258915	202	+	.	.
scaffold160	subtractBed	intrn	266565	266594	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	266565	266594	53	+	.	.
scaffold160	subtractBed	intrn	272407	272445	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	272407	272445	60	+	.	.
scaffold160	subtractBed	intrn	273519	273814	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	273519	273814	441	+	.	.
scaffold160	subtractBed	intrn	273519	274262	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	273519	274262	463	+	.	.
scaffold160	subtractBed	intrn	273736	274844	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	273736	274844	1656	+	.	.
scaffold160	subtractBed	intrn	273790	274052	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	273790	274052	89	+	.	.
scaffold160	subtractBed	intrn	274028	274262	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	274028	274262	389	+	.	.
scaffold160	subtractBed	intrn	274238	274719	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	274238	274719	106	+	.	.
scaffold160	subtractBed	intrn	274768	275033	.	+	.	Parent=CGI_10020582;
	scaffold160	TRF	Tandem_Repeat	274768	275033	435	+	.	.
scaffold160	subtractBed	intrn	320231	320659	.	-	.	Parent=CGI_10020588;
	scaffold160	WUBlastX	LTR_Pao	320231	320659	64	-	.	.
scaffold160	subtractBed	intrn	320309	320683	.	-	.	Parent=CGI_10020588;
	scaffold160	WUBlastX	LTR_Pao	320309	320683	107	-	.	.
scaffold160	subtractBed	intrn	342125	342184	.	+	.	Parent=CGI_10020592;
	scaffold160	TRF	Tandem_Repeat	342125	342184	120	+	.	.
scaffold160	subtractBed	intrn	342515	342738	.	+	.	Parent=CGI_10020592;
	scaffold160	WUBlastX	LINE_RTE-X	342487	342738	52	+	.	.
scaffold160	subtractBed	intrn	342532	342738	.	+	.	Parent=CGI_10020592;
	scaffold160	WUBlastX	LINE_RTE-X	342532	342738	66	+	.	.
scaffold160	subtractBed	intrn	343377	343427	.	+	.	Parent=CGI_10020592;
	scaffold160	TRF	Tandem_Repeat	343377	343427	84	+	.	.
scaffold160	subtractBed	intrn	343438	344273	.	+	.	Parent=CGI_10020592;
	scaffold160	TRF	Tandem_Repeat	343438	344273	1160	+	.	.
scaffold160	subtractBed	intrn	366776	366984	.	-	.	Parent=CGI_10020595;
	scaffold160	TRF	Tandem_Repeat	366776	366984	168	+	.	.
scaffold160	subtractBed	intrn	447824	447887	.	-	.	Parent=CGI_10020602;
	scaffold160	TRF	Tandem_Repeat	447824	447887	64	+	.	.
scaffold160	subtractBed	intrn	447861	448027	.	-	.	Parent=CGI_10020602;
	scaffold160	TRF	Tandem_Repeat	447861	448027	152	+	.	.
scaffold160	subtractBed	intrn	448922	449123	.	-	.	Parent=CGI_10020602;
	scaffold160	TRF	Tandem_Repeat	448922	449123	165	+	.	.
scaffold160	subtractBed	intrn	523899	523983	.	-	.	Parent=CGI_10020606;
	scaffold160	WUBlastX	DNA_hAT-Tip100	523852	523983	50	-	.	.
scaffold160	subtractBed	intrn	523899	523983	.	-	.	Parent=CGI_10020606;
	scaffold160	WUBlastX	DNA_hAT-Tip100	523789	523983	38	-	.	.
scaffold160	subtractBed	intrn	529164	530129	.	-	.	Parent=CGI_10020606;
	scaffold160	WUBlastX	LINE_L1-Tx1	529164	530129	405	+	.	.
scaffold160	subtractBed	intrn	528035	529153	.	-	.	Parent=CGI_10020606;
	scaffold160	WUBlastX	LINE_L1-Tx1	528035	529153	426	+	.	.
scaffold160	subtractBed	intrn	524212	524298	.	-	.	Parent=CGI_10020606;
	scaffold160	WUBlastX	DNA_hAT-Tip100	524212	524298	24	-	.	.
scaffold1600	subtractBed	intrn	25354	25395	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	25354	25395	84	+	.	.
scaffold1600	subtractBed	intrn	32042	32099	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	32042	32099	109	+	.	.
scaffold1600	subtractBed	intrn	37054	37119	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	37054	37119	132	+	.	.
scaffold1600	subtractBed	intrn	43553	43608	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	43553	43608	58	+	.	.
scaffold1600	subtractBed	intrn	45089	45229	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	45089	45229	129	+	.	.
scaffold1600	subtractBed	intrn	46228	46341	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	46228	46341	124	+	.	.
scaffold1600	subtractBed	intrn	48734	48774	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	48734	48774	82	+	.	.
scaffold1600	subtractBed	intrn	49291	49320	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	49291	49320	60	+	.	.
scaffold1600	subtractBed	intrn	50684	51057	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	50684	51057	364	+	.	.
scaffold1600	subtractBed	intrn	51127	51403	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	51127	51457	509	+	.	.
scaffold1600	subtractBed	intrn	54238	54283	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	54238	54283	92	+	.	.
scaffold1600	subtractBed	intrn	57734	57774	.	-	.	Parent=CGI_10013033;
	scaffold1600	TRF	Tandem_Repeat	57734	57774	73	+	.	.
scaffold1600	subtractBed	intrn	88599	88634	.	-	.	Parent=CGI_10013035;
	scaffold1600	TRF	Tandem_Repeat	88599	88634	72	+	.	.
scaffold1600	subtractBed	intrn	97784	97824	.	+	.	Parent=CGI_10013036;
	scaffold1600	TRF	Tandem_Repeat	97784	97824	66	+	.	.
scaffold1600	subtractBed	intrn	112990	113298	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	112990	113298	246	+	.	.
scaffold1600	subtractBed	intrn	112991	113304	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	112991	113304	260	+	.	.
scaffold1600	subtractBed	intrn	114990	115140	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	114990	115140	151	+	.	.
scaffold1600	subtractBed	intrn	114992	115169	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	114992	115169	126	+	.	.
scaffold1600	subtractBed	intrn	117954	118027	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	117954	118027	121	+	.	.
scaffold1600	subtractBed	intrn	126234	126287	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	126234	126287	99	+	.	.
scaffold1600	subtractBed	intrn	128739	128791	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	128739	128791	97	+	.	.
scaffold1600	subtractBed	intrn	129016	129074	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	129016	129074	118	+	.	.
scaffold1600	subtractBed	intrn	134592	134640	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	134592	134640	98	+	.	.
scaffold1600	subtractBed	intrn	138697	139012	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	138697	139012	348	+	.	.
scaffold1600	subtractBed	intrn	145070	145118	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	145070	145118	98	+	.	.
scaffold1600	subtractBed	intrn	158351	159449	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	158351	159449	1034	+	.	.
scaffold1600	subtractBed	intrn	158398	158502	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	158398	158502	61	+	.	.
scaffold1600	subtractBed	intrn	158460	159709	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	158460	159709	712	+	.	.
scaffold1600	subtractBed	intrn	158770	159449	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	158770	159449	801	+	.	.
scaffold1600	subtractBed	intrn	158766	159441	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	158766	159441	750	+	.	.
scaffold1600	subtractBed	intrn	159462	159741	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	159462	159741	411	+	.	.
scaffold1600	subtractBed	intrn	164818	164932	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	164818	164932	81	+	.	.
scaffold1600	subtractBed	intrn	164823	164932	.	+	.	Parent=CGI_10013037;
	scaffold1600	TRF	Tandem_Repeat	164823	164932	94	+	.	.
scaffold1600	subtractBed	intrn	185827	185988	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	185827	185988	56	+	.	.
scaffold1600	subtractBed	intrn	185382	185555	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	185382	185555	21	+	.	.
scaffold1600	subtractBed	intrn	184624	184776	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	184624	184776	33	+	.	.
scaffold1600	subtractBed	intrn	184660	184761	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	184660	184761	36	+	.	.
scaffold1600	subtractBed	intrn	184574	184669	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	184574	184669	22	+	.	.
scaffold1600	subtractBed	intrn	185827	186168	.	+	.	Parent=CGI_10013038;
	scaffold1600	WUBlastX	LTR_DIRS	185827	186168	55	+	.	.
scaffold1600	subtractBed	intrn	185827	185988	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	185827	185988	56	+	.	.
scaffold1600	subtractBed	intrn	185382	185555	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	185382	185555	21	+	.	.
scaffold1600	subtractBed	intrn	184624	184776	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	184624	184776	33	+	.	.
scaffold1600	subtractBed	intrn	184660	184761	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	184660	184761	36	+	.	.
scaffold1600	subtractBed	intrn	184574	184669	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	184574	184669	22	+	.	.
scaffold1600	subtractBed	intrn	185827	186168	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LTR_DIRS	185827	186168	55	+	.	.
scaffold1600	subtractBed	intrn	190284	191368	.	-	.	Parent=CGI_10013039;
	scaffold1600	TRF	Tandem_Repeat	190284	191368	1753	+	.	.
scaffold1600	subtractBed	intrn	196007	196168	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LINE_RTE-BovB	196007	196168	52	+	.	.
scaffold1600	subtractBed	intrn	194791	195834	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LINE_Proto2	194791	195834	40	+	.	.
scaffold1600	subtractBed	intrn	194965	196134	.	-	.	Parent=CGI_10013039;
	scaffold1600	WUBlastX	LINE_RTE-BovB	194965	196134	756	+	.	.
scaffold1600	subtractBed	intrn	204520	204564	.	+	.	Parent=CGI_10013040;
	scaffold1600	TRF	Tandem_Repeat	204520	204564	54	+	.	.
scaffold1600	subtractBed	intrn	204776	204812	.	+	.	Parent=CGI_10013040;
	scaffold1600	TRF	Tandem_Repeat	204776	204812	74	+	.	.
scaffold1600	subtractBed	intrn	238907	239195	.	+	.	Parent=CGI_10013044;
	scaffold1600	TRF	Tandem_Repeat	238907	239195	485	+	.	.
scaffold1600	subtractBed	intrn	244214	244258	.	+	.	Parent=CGI_10013044;
	scaffold1600	TRF	Tandem_Repeat	244214	244258	90	+	.	.
scaffold1600	subtractBed	intrn	245600	245653	.	+	.	Parent=CGI_10013044;
	scaffold1600	TRF	Tandem_Repeat	245600	245653	99	+	.	.
scaffold1600	subtractBed	intrn	276173	276202	.	+	.	Parent=CGI_10013045;
	scaffold1600	TRF	Tandem_Repeat	276173	276202	60	+	.	.
scaffold1600	subtractBed	intrn	276458	276491	.	+	.	Parent=CGI_10013045;
	scaffold1600	TRF	Tandem_Repeat	276458	276491	68	+	.	.
scaffold1600	subtractBed	intrn	289264	289289	.	-	.	Parent=CGI_10013046;
	scaffold1600	TRF	Tandem_Repeat	289264	289289	52	+	.	.
scaffold1600	subtractBed	intrn	296940	296984	.	-	.	Parent=CGI_10013046;
	scaffold1600	TRF	Tandem_Repeat	296940	296984	90	+	.	.
scaffold1601	subtractBed	intrn	60277	60329	.	-	.	Parent=CGI_10010242;
	scaffold1601	TRF	Tandem_Repeat	60277	60329	106	+	.	.
scaffold1601	subtractBed	intrn	70440	71614	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	70440	71614	548	+	.	.
scaffold1601	subtractBed	intrn	70407	70650	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	70407	70650	210	+	.	.
scaffold1601	subtractBed	intrn	70702	71591	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	70702	71591	1456	+	.	.
scaffold1601	subtractBed	intrn	72912	73226	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	72912	73226	114	+	.	.
scaffold1601	subtractBed	intrn	73052	73226	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	73052	73226	206	+	.	.
scaffold1601	subtractBed	intrn	75522	75937	.	-	.	Parent=CGI_10010243;
	scaffold1601	TRF	Tandem_Repeat	75522	75937	566	+	.	.
scaffold1601	subtractBed	intrn	81422	81521	.	+	.	Parent=CGI_10010244;
	scaffold1601	TRF	Tandem_Repeat	81422	81521	67	+	.	.
scaffold1601	subtractBed	intrn	91046	91178	.	+	.	Parent=CGI_10010244;
	scaffold1601	TRF	Tandem_Repeat	91032	91178	222	+	.	.
scaffold1601	subtractBed	intrn	97343	97463	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	97343	97463	104	+	.	.
scaffold1601	subtractBed	intrn	98682	99094	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	98682	99094	520	+	.	.
scaffold1601	subtractBed	intrn	98686	99094	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	98686	99094	575	+	.	.
scaffold1601	subtractBed	intrn	100839	100876	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	100839	100876	51	+	.	.
scaffold1601	subtractBed	intrn	102492	102539	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	102492	102539	96	+	.	.
scaffold1601	subtractBed	intrn	104010	104182	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	104010	104182	238	+	.	.
scaffold1601	subtractBed	intrn	104194	104357	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	104194	104357	247	+	.	.
scaffold1601	subtractBed	intrn	104371	104921	.	-	.	Parent=CGI_10010245;
	scaffold1601	TRF	Tandem_Repeat	104371	104921	652	+	.	.
scaffold1601	subtractBed	intrn	109850	110653	.	-	.	Parent=CGI_10010246;
	scaffold1601	TRF	Tandem_Repeat	109850	110653	606	+	.	.
scaffold1601	subtractBed	intrn	111862	111886	.	-	.	Parent=CGI_10010246;
	scaffold1601	TRF	Tandem_Repeat	111862	111886	50	+	.	.
scaffold1601	subtractBed	intrn	113101	113132	.	-	.	Parent=CGI_10010246;
	scaffold1601	TRF	Tandem_Repeat	113101	113132	64	+	.	.
scaffold1601	subtractBed	intrn	114020	114191	.	-	.	Parent=CGI_10010246;
	scaffold1601	TRF	Tandem_Repeat	114020	114191	116	+	.	.
scaffold1601	subtractBed	intrn	120665	120703	.	-	.	Parent=CGI_10010246;
	scaffold1601	TRF	Tandem_Repeat	120665	120703	69	+	.	.
scaffold1601	subtractBed	intrn	122048	122246	.	-	.	Parent=CGI_10010247;
	scaffold1601	TRF	Tandem_Repeat	122048	122246	326	+	.	.
scaffold1601	subtractBed	intrn	123421	123468	.	-	.	Parent=CGI_10010247;
	scaffold1601	TRF	Tandem_Repeat	123421	123468	96	+	.	.
scaffold1601	subtractBed	intrn	145680	145712	.	+	.	Parent=CGI_10010251;
	scaffold1601	TRF	Tandem_Repeat	145680	145712	66	+	.	.
scaffold1601	subtractBed	intrn	157139	158162	.	+	.	Parent=CGI_10010252;
	scaffold1601	TRF	Tandem_Repeat	157139	158162	1230	+	.	.
scaffold1601	subtractBed	intrn	157162	158162	.	+	.	Parent=CGI_10010252;
	scaffold1601	TRF	Tandem_Repeat	157162	158162	1056	+	.	.
scaffold1601	subtractBed	intrn	157139	158162	.	+	.	Parent=CGI_10010252;
	scaffold1601	TRF	Tandem_Repeat	157139	158162	1036	+	.	.
scaffold1601	subtractBed	intrn	199769	200051	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	199769	200051	261	+	.	.
scaffold1601	subtractBed	intrn	203042	203757	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	203042	203757	1132	+	.	.
scaffold1601	subtractBed	intrn	203927	204082	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	203927	204082	267	+	.	.
scaffold1601	subtractBed	intrn	206894	206934	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	206894	206934	82	+	.	.
scaffold1601	subtractBed	intrn	208170	208231	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	208170	208231	54	+	.	.
scaffold1601	subtractBed	intrn	208170	208231	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	208170	208231	54	+	.	.
scaffold1601	subtractBed	intrn	209143	209696	.	-	.	Parent=CGI_10010254;
	scaffold1601	TRF	Tandem_Repeat	209143	209696	686	+	.	.
scaffold1603	subtractBed	intrn	31820	31865	.	-	.	Parent=CGI_10012815;
	scaffold1603	TRF	Tandem_Repeat	31820	31865	76	+	.	.
scaffold1603	subtractBed	intrn	34007	34320	.	-	.	Parent=CGI_10012815;
	scaffold1603	TRF	Tandem_Repeat	34007	34320	330	+	.	.
scaffold1603	subtractBed	intrn	37379	37461	.	-	.	Parent=CGI_10012815;
	scaffold1603	TRF	Tandem_Repeat	37379	37461	103	+	.	.
scaffold1603	subtractBed	intrn	37379	37461	.	-	.	Parent=CGI_10012815;
	scaffold1603	TRF	Tandem_Repeat	37379	37461	103	+	.	.
scaffold1603	subtractBed	intrn	37379	37461	.	-	.	Parent=CGI_10012815;
	scaffold1603	TRF	Tandem_Repeat	37379	37461	103	+	.	.
scaffold1603	subtractBed	intrn	46979	47023	.	-	.	Parent=CGI_10012816;
	scaffold1603	TRF	Tandem_Repeat	46979	47023	81	+	.	.
scaffold1603	subtractBed	intrn	49741	50130	.	-	.	Parent=CGI_10012816;
	scaffold1603	TRF	Tandem_Repeat	49741	50130	564	+	.	.
scaffold1603	subtractBed	intrn	58274	58828	.	-	.	Parent=CGI_10012816;
	scaffold1603	WUBlastX	DNA_P	58274	58828	32	-	.	.
scaffold1603	subtractBed	intrn	59783	60142	.	-	.	Parent=CGI_10012816;
	scaffold1603	WUBlastX	RC_Helitron	59783	60142	110	+	.	.
scaffold1603	subtractBed	intrn	58274	58987	.	-	.	Parent=CGI_10012816;
	scaffold1603	WUBlastX	DNA_P	58274	58987	22	-	.	.
scaffold1603	subtractBed	intrn	59714	60229	.	-	.	Parent=CGI_10012816;
	scaffold1603	WUBlastX	RC_Helitron	59714	60229	99	+	.	.
scaffold1603	subtractBed	intrn	59747	60184	.	-	.	Parent=CGI_10012816;
	scaffold1603	WUBlastX	RC_Helitron	59747	60184	107	+	.	.
scaffold1603	subtractBed	intrn	138493	139154	.	+	.	Parent=CGI_10012820;
	scaffold1603	TRF	Tandem_Repeat	138493	139154	805	+	.	.
scaffold1603	subtractBed	intrn	157658	157709	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	157658	157709	68	+	.	.
scaffold1603	subtractBed	intrn	157709	157743	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	157709	157743	70	+	.	.
scaffold1603	subtractBed	intrn	161009	161123	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	161009	161123	158	+	.	.
scaffold1603	subtractBed	intrn	161983	162289	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	161983	162289	389	+	.	.
scaffold1603	subtractBed	intrn	161983	162290	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	161983	162290	321	+	.	.
scaffold1603	subtractBed	intrn	165378	165435	.	-	.	Parent=CGI_10012822;
	scaffold1603	TRF	Tandem_Repeat	165378	165435	116	+	.	.
scaffold1603	subtractBed	intrn	188155	188840	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	188155	188840	948	+	.	.
scaffold1603	subtractBed	intrn	198292	199008	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	198292	199008	1122	+	.	.
scaffold1603	subtractBed	intrn	198292	199008	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	198292	199008	1125	+	.	.
scaffold1603	subtractBed	intrn	198292	199008	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	198292	199008	1108	+	.	.
scaffold1603	subtractBed	intrn	199944	200102	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	199944	200102	191	+	.	.
scaffold1603	subtractBed	intrn	199948	200102	.	+	.	Parent=CGI_10012824;
	scaffold1603	TRF	Tandem_Repeat	199948	200102	217	+	.	.
scaffold1603	subtractBed	intrn	336600	337096	.	-	.	Parent=CGI_10012827;
	scaffold1603	TRF	Tandem_Repeat	336600	337096	976	+	.	.
scaffold1603	subtractBed	intrn	331952	332011	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331952	332011	40	-	.	.
scaffold1603	subtractBed	intrn	333551	333682	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333551	333682	47	-	.	.
scaffold1603	subtractBed	intrn	334130	334402	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	334130	334402	29	-	.	.
scaffold1603	subtractBed	intrn	333158	333376	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333158	333376	103	-	.	.
scaffold1603	subtractBed	intrn	331801	331980	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331801	331980	84	-	.	.
scaffold1603	subtractBed	intrn	331560	331610	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331560	331610	24	-	.	.
scaffold1603	subtractBed	intrn	333688	333831	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333688	333831	42	-	.	.
scaffold1603	subtractBed	intrn	331940	332104	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331940	332104	28	-	.	.
scaffold1603	subtractBed	intrn	332076	332528	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	332076	332528	170	-	.	.
scaffold1603	subtractBed	intrn	331560	331601	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331560	331601	27	-	.	.
scaffold1603	subtractBed	intrn	334127	334576	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	334127	334576	22	-	.	.
scaffold1603	subtractBed	intrn	333170	333421	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333170	333421	69	-	.	.
scaffold1603	subtractBed	intrn	333703	333795	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333703	333795	43	-	.	.
scaffold1603	subtractBed	intrn	331630	331938	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	331630	331938	125	-	.	.
scaffold1603	subtractBed	intrn	332070	333143	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	332070	333143	156	-	.	.
scaffold1603	subtractBed	intrn	333361	333558	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333361	333558	62	-	.	.
scaffold1603	subtractBed	intrn	333867	334100	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333867	334100	96	-	.	.
scaffold1603	subtractBed	intrn	333780	333998	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	333780	333998	35	-	.	.
scaffold1603	subtractBed	intrn	334564	334644	.	-	.	Parent=CGI_10012827;
	scaffold1603	WUBlastX	LTR_Pao	334564	334644	21	-	.	.
scaffold1605	subtractBed	intrn	12951	12994	.	-	.	Parent=CGI_10023340;
	scaffold1605	TRF	Tandem_Repeat	12951	12994	88	+	.	.
scaffold1605	subtractBed	intrn	12484	12709	.	-	.	Parent=CGI_10023340;
	scaffold1605	WUBlastX	LINE_L2	12437	12709	33	-	.	.
scaffold1605	subtractBed	intrn	19214	19246	.	-	.	Parent=CGI_10023342;
	scaffold1605	TRF	Tandem_Repeat	19214	19246	66	+	.	.
scaffold1605	subtractBed	intrn	21041	21189	.	-	.	Parent=CGI_10023342;
	scaffold1605	TRF	Tandem_Repeat	21041	21189	79	+	.	.
scaffold1605	subtractBed	intrn	22195	22977	.	-	.	Parent=CGI_10023342;
	scaffold1605	TRF	Tandem_Repeat	22195	22977	693	+	.	.
scaffold1605	subtractBed	intrn	53509	53519	.	-	.	Parent=CGI_10023343;
	scaffold1605	WUBlastX	DNA_hAT	53509	53865	117	-	.	.
scaffold1605	subtractBed	intrn	60865	60903	.	+	.	Parent=CGI_10023345;
	scaffold1605	TRF	Tandem_Repeat	60865	60903	78	+	.	.
scaffold1605	subtractBed	intrn	128892	128920	.	+	.	Parent=CGI_10023350;
	scaffold1605	TRF	Tandem_Repeat	128892	128920	58	+	.	.
scaffold1605	subtractBed	intrn	207184	207220	.	+	.	Parent=CGI_10023352;
	scaffold1605	TRF	Tandem_Repeat	207184	207220	74	+	.	.
scaffold1605	subtractBed	intrn	258917	258965	.	+	.	Parent=CGI_10023353;
	scaffold1605	TRF	Tandem_Repeat	258917	258965	98	+	.	.
scaffold1605	subtractBed	intrn	259922	259958	.	+	.	Parent=CGI_10023353;
	scaffold1605	TRF	Tandem_Repeat	259922	259958	74	+	.	.
scaffold1605	subtractBed	intrn	285343	285372	.	-	.	Parent=CGI_10023356;
	scaffold1605	TRF	Tandem_Repeat	285343	285372	60	+	.	.
scaffold1605	subtractBed	intrn	285681	285738	.	-	.	Parent=CGI_10023356;
	scaffold1605	TRF	Tandem_Repeat	285681	285738	116	+	.	.
scaffold1605	subtractBed	intrn	314679	314728	.	+	.	Parent=CGI_10023358;
	scaffold1605	TRF	Tandem_Repeat	314679	314728	100	+	.	.
scaffold1605	subtractBed	intrn	315804	315837	.	+	.	Parent=CGI_10023358;
	scaffold1605	TRF	Tandem_Repeat	315804	315837	50	+	.	.
scaffold1605	subtractBed	intrn	379923	379961	.	-	.	Parent=CGI_10023361;
	scaffold1605	TRF	Tandem_Repeat	379923	379961	78	+	.	.
scaffold1605	subtractBed	intrn	394434	395084	.	-	.	Parent=CGI_10023362;
	scaffold1605	TRF	Tandem_Repeat	394434	395084	1214	+	.	.
scaffold1605	subtractBed	intrn	420580	421086	.	+	.	Parent=CGI_10023364;
	scaffold1605	TRF	Tandem_Repeat	420580	421086	447	+	.	.
scaffold1605	subtractBed	intrn	420580	421015	.	+	.	Parent=CGI_10023364;
	scaffold1605	TRF	Tandem_Repeat	420580	421015	460	+	.	.
scaffold1605	subtractBed	intrn	428348	428512	.	+	.	Parent=CGI_10023364;
	scaffold1605	TRF	Tandem_Repeat	428334	428512	256	+	.	.
scaffold1605	subtractBed	intrn	420580	421086	.	-	.	Parent=CGI_10023365;
	scaffold1605	TRF	Tandem_Repeat	420580	421086	447	+	.	.
scaffold1605	subtractBed	intrn	420580	421015	.	-	.	Parent=CGI_10023365;
	scaffold1605	TRF	Tandem_Repeat	420580	421015	460	+	.	.
scaffold1605	subtractBed	intrn	469958	470834	.	-	.	Parent=CGI_10023369;
	scaffold1605	TRF	Tandem_Repeat	469958	470834	1368	+	.	.
scaffold1605	subtractBed	intrn	472667	473494	.	-	.	Parent=CGI_10023369;
	scaffold1605	TRF	Tandem_Repeat	472667	473494	1217	+	.	.
scaffold1605	subtractBed	intrn	619794	619986	.	+	.	Parent=CGI_10023380;
	scaffold1605	TRF	Tandem_Repeat	619794	619986	289	+	.	.
scaffold1605	subtractBed	intrn	620387	620421	.	+	.	Parent=CGI_10023380;
	scaffold1605	TRF	Tandem_Repeat	620387	620421	52	+	.	.
scaffold1605	subtractBed	intrn	700116	700402	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	700116	700402	351	+	.	.
scaffold1605	subtractBed	intrn	710103	710171	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	710103	710171	138	+	.	.
scaffold1605	subtractBed	intrn	711804	711851	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	711804	711851	87	+	.	.
scaffold1605	subtractBed	intrn	722212	722298	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	722212	722298	72	+	.	.
scaffold1605	subtractBed	intrn	730861	731008	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	730861	731008	81	+	.	.
scaffold1605	subtractBed	intrn	730965	731033	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	730965	731033	52	+	.	.
scaffold1605	subtractBed	intrn	730935	731046	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	730935	731046	76	+	.	.
scaffold1605	subtractBed	intrn	730935	731095	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	730935	731095	91	+	.	.
scaffold1605	subtractBed	intrn	730964	731037	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	730964	731037	60	+	.	.
scaffold1605	subtractBed	intrn	731702	732067	.	-	.	Parent=CGI_10023387;
	scaffold1605	WUBlastX	DNA_hAT	731702	732067	122	-	.	.
scaffold1605	subtractBed	intrn	737423	737456	.	-	.	Parent=CGI_10023387;
	scaffold1605	TRF	Tandem_Repeat	737423	737456	61	+	.	.
scaffold1605	subtractBed	intrn	737423	737456	.	+	.	Parent=CGI_10023389;
	scaffold1605	TRF	Tandem_Repeat	737423	737456	61	+	.	.
scaffold1605	subtractBed	intrn	796873	796935	.	+	.	Parent=CGI_10023393;
	scaffold1605	TRF	Tandem_Repeat	796873	796935	126	+	.	.
scaffold1608	subtractBed	intrn	14081	14107	.	+	.	Parent=CGI_10010667;
	scaffold1608	TRF	Tandem_Repeat	14081	14107	54	+	.	.
scaffold1608	subtractBed	intrn	20829	20889	.	+	.	Parent=CGI_10010667;
	scaffold1608	TRF	Tandem_Repeat	20829	20889	86	+	.	.
scaffold1608	subtractBed	intrn	20829	20892	.	+	.	Parent=CGI_10010667;
	scaffold1608	TRF	Tandem_Repeat	20829	20892	65	+	.	.
scaffold1608	subtractBed	intrn	20831	20889	.	+	.	Parent=CGI_10010667;
	scaffold1608	TRF	Tandem_Repeat	20831	20889	100	+	.	.
scaffold1608	subtractBed	intrn	64069	64094	.	-	.	Parent=CGI_10010674;
	scaffold1608	TRF	Tandem_Repeat	64069	64094	52	+	.	.
scaffold1608	subtractBed	intrn	79189	79213	.	+	.	Parent=CGI_10010676;
	scaffold1608	TRF	Tandem_Repeat	79189	79213	50	+	.	.
scaffold1608	subtractBed	intrn	80217	80241	.	+	.	Parent=CGI_10010676;
	scaffold1608	TRF	Tandem_Repeat	80217	80241	50	+	.	.
scaffold1608	subtractBed	intrn	109120	109189	.	+	.	Parent=CGI_10010678;
	scaffold1608	TRF	Tandem_Repeat	109120	109189	140	+	.	.
scaffold1608	subtractBed	intrn	112246	112288	.	+	.	Parent=CGI_10010678;
	scaffold1608	TRF	Tandem_Repeat	112246	112288	86	+	.	.
scaffold1608	subtractBed	intrn	126643	127548	.	+	.	Parent=CGI_10010678;
	scaffold1608	TRF	Tandem_Repeat	126643	127548	1525	+	.	.
scaffold1608	subtractBed	intrn	127855	127955	.	+	.	Parent=CGI_10010678;
	scaffold1608	TRF	Tandem_Repeat	127855	127955	66	+	.	.
scaffold1608	subtractBed	intrn	128757	128855	.	+	.	Parent=CGI_10010678;
	scaffold1608	TRF	Tandem_Repeat	128757	128855	55	+	.	.
scaffold1608	subtractBed	intrn	181966	182093	.	+	.	Parent=CGI_10010681;
	scaffold1608	TRF	Tandem_Repeat	181966	182093	247	+	.	.
scaffold1608	subtractBed	intrn	253864	254352	.	-	.	Parent=CGI_10010686;
	scaffold1608	TRF	Tandem_Repeat	253864	254352	513	+	.	.
scaffold1608	subtractBed	intrn	254064	254352	.	-	.	Parent=CGI_10010686;
	scaffold1608	TRF	Tandem_Repeat	254064	254352	245	+	.	.
scaffold1608	subtractBed	intrn	253892	254352	.	-	.	Parent=CGI_10010686;
	scaffold1608	TRF	Tandem_Repeat	253892	254352	592	+	.	.
scaffold1609	subtractBed	intrn	134789	134866	.	+	.	Parent=CGI_10010601;
	scaffold1609	TRF	Tandem_Repeat	134789	134866	70	+	.	.
scaffold1609	subtractBed	intrn	134984	135025	.	+	.	Parent=CGI_10010601;
	scaffold1609	TRF	Tandem_Repeat	134984	135025	84	+	.	.
scaffold1609	subtractBed	intrn	135827	135860	.	+	.	Parent=CGI_10010601;
	scaffold1609	TRF	Tandem_Repeat	135827	135860	59	+	.	.
scaffold1609	subtractBed	intrn	135812	135860	.	+	.	Parent=CGI_10010601;
	scaffold1609	TRF	Tandem_Repeat	135812	135860	55	+	.	.
scaffold1609	subtractBed	intrn	151814	151860	.	-	.	Parent=CGI_10010602;
	scaffold1609	TRF	Tandem_Repeat	151814	151860	94	+	.	.
scaffold1609	subtractBed	intrn	153764	153834	.	-	.	Parent=CGI_10010602;
	scaffold1609	TRF	Tandem_Repeat	153764	153834	135	+	.	.
scaffold1609	subtractBed	intrn	159184	161556	.	-	.	Parent=CGI_10010602;
	scaffold1609	WUBlastX	LTR_Gypsy	159184	161556	995	+	.	.
scaffold1609	subtractBed	intrn	158513	159157	.	-	.	Parent=CGI_10010602;
	scaffold1609	WUBlastX	LTR_Gypsy	158513	159157	515	+	.	.
scaffold1609	subtractBed	intrn	159151	160602	.	-	.	Parent=CGI_10010602;
	scaffold1609	WUBlastX	LTR_Gypsy	159151	160602	1370	+	.	.
scaffold1609	subtractBed	intrn	160942	161712	.	-	.	Parent=CGI_10010602;
	scaffold1609	WUBlastX	LTR_Gypsy	160942	161712	425	+	.	.
scaffold1609	subtractBed	intrn	260656	260836	.	+	.	Parent=CGI_10010609;
	scaffold1609	TRF	Tandem_Repeat	260656	260836	107	+	.	.
scaffold161	subtractBed	intrn	37325	37828	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	37325	37828	543	+	.	.
scaffold161	subtractBed	intrn	38793	38829	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	38793	38829	74	+	.	.
scaffold161	subtractBed	intrn	43213	43250	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	43213	43250	58	+	.	.
scaffold161	subtractBed	intrn	47762	47887	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	47762	47887	143	+	.	.
scaffold161	subtractBed	intrn	49515	49615	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	49515	49615	109	+	.	.
scaffold161	subtractBed	intrn	58324	58465	.	+	.	Parent=CGI_10008584;
	scaffold161	TRF	Tandem_Repeat	58324	58465	223	+	.	.
scaffold161	subtractBed	intrn	69357	69670	.	+	.	Parent=CGI_10008585;
	scaffold161	TRF	Tandem_Repeat	69343	69670	236	+	.	.
scaffold161	subtractBed	intrn	69438	69583	.	+	.	Parent=CGI_10008585;
	scaffold161	TRF	Tandem_Repeat	69438	69583	111	+	.	.
scaffold161	subtractBed	intrn	73139	73185	.	+	.	Parent=CGI_10008585;
	scaffold161	TRF	Tandem_Repeat	73139	73185	94	+	.	.
scaffold161	subtractBed	intrn	98760	98889	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	98760	98889	233	+	.	.
scaffold161	subtractBed	intrn	98921	99484	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	98921	99484	950	+	.	.
scaffold161	subtractBed	intrn	100283	100590	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	100283	100590	249	+	.	.
scaffold161	subtractBed	intrn	100386	100520	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	100386	100520	91	+	.	.
scaffold161	subtractBed	intrn	100589	100756	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	100589	100756	266	+	.	.
scaffold161	subtractBed	intrn	100913	101027	.	-	.	Parent=CGI_10008587;
	scaffold161	TRF	Tandem_Repeat	100913	101027	88	+	.	.
scaffold161	subtractBed	intrn	110303	111367	.	+	.	Parent=CGI_10008589;
	scaffold161	WUBlastX	LTR_Gypsy	110303	111367	139	+	.	.
scaffold161	subtractBed	intrn	110020	110184	.	+	.	Parent=CGI_10008589;
	scaffold161	WUBlastX	LTR_Gypsy	110020	110184	26	+	.	.
scaffold161	subtractBed	intrn	110495	112582	.	+	.	Parent=CGI_10008589;
	scaffold161	WUBlastX	LTR_DIRS	110495	112582	1405	+	.	.
scaffold161	subtractBed	intrn	112465	112689	.	+	.	Parent=CGI_10008589;
	scaffold161	WUBlastX	LTR_DIRS	112465	112689	133	+	.	.
scaffold161	subtractBed	intrn	187499	188370	.	+	.	Parent=CGI_10008593;
	scaffold161	TRF	Tandem_Repeat	187499	188370	908	+	.	.
scaffold161	subtractBed	intrn	189690	190982	.	+	.	Parent=CGI_10008593;
	scaffold161	TRF	Tandem_Repeat	189690	190982	1726	+	.	.
scaffold1610	subtractBed	intrn	22722	22760	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	22722	22760	78	+	.	.
scaffold1610	subtractBed	intrn	26628	26677	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	26628	26677	100	+	.	.
scaffold1610	subtractBed	intrn	26677	26716	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	26677	26716	80	+	.	.
scaffold1610	subtractBed	intrn	27698	27747	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	27698	27747	100	+	.	.
scaffold1610	subtractBed	intrn	29808	29889	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	29808	29889	119	+	.	.
scaffold1610	subtractBed	intrn	29808	29889	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	29808	29889	137	+	.	.
scaffold1610	subtractBed	intrn	33480	33512	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	33480	33512	50	+	.	.
scaffold1610	subtractBed	intrn	33827	33894	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	33827	33894	136	+	.	.
scaffold1610	subtractBed	intrn	33979	34027	.	-	.	Parent=CGI_10016490;
	scaffold1610	TRF	Tandem_Repeat	33979	34027	98	+	.	.
scaffold1610	subtractBed	intrn	40369	40429	.	+	.	Parent=CGI_10016491;
	scaffold1610	TRF	Tandem_Repeat	40369	40429	122	+	.	.
scaffold1610	subtractBed	intrn	49366	50097	.	-	.	Parent=CGI_10016492;
	scaffold1610	TRF	Tandem_Repeat	49366	50097	975	+	.	.
scaffold1610	subtractBed	intrn	51448	51501	.	-	.	Parent=CGI_10016492;
	scaffold1610	TRF	Tandem_Repeat	51448	51501	74	+	.	.
scaffold1610	subtractBed	intrn	62063	62123	.	-	.	Parent=CGI_10016492;
	scaffold1610	TRF	Tandem_Repeat	62063	62123	50	+	.	.
scaffold1610	subtractBed	intrn	119334	119393	.	+	.	Parent=CGI_10016495;
	scaffold1610	TRF	Tandem_Repeat	119334	119393	54	+	.	.
scaffold1610	subtractBed	intrn	177671	177714	.	-	.	Parent=CGI_10016498;
	scaffold1610	TRF	Tandem_Repeat	177671	177714	61	+	.	.
scaffold1610	subtractBed	intrn	181880	182202	.	-	.	Parent=CGI_10016498;
	scaffold1610	TRF	Tandem_Repeat	181880	182202	173	+	.	.
scaffold1610	subtractBed	intrn	218010	218042	.	+	.	Parent=CGI_10016501;
	scaffold1610	TRF	Tandem_Repeat	218010	218042	59	+	.	.
scaffold1610	subtractBed	intrn	232632	232691	.	+	.	Parent=CGI_10016503;
	scaffold1610	TRF	Tandem_Repeat	232632	232691	56	+	.	.
scaffold1610	subtractBed	intrn	232641	232691	.	+	.	Parent=CGI_10016503;
	scaffold1610	TRF	Tandem_Repeat	232641	232691	66	+	.	.
scaffold1610	subtractBed	intrn	232646	232690	.	+	.	Parent=CGI_10016503;
	scaffold1610	TRF	Tandem_Repeat	232646	232690	65	+	.	.
scaffold1610	subtractBed	intrn	229664	229867	.	+	.	Parent=CGI_10016503;
	scaffold1610	WUBlastX	DNA_Kolobok-IS4	229664	229867	44	+	.	.
scaffold1610	subtractBed	intrn	238453	238497	.	+	.	Parent=CGI_10016503;
	scaffold1610	TRF	Tandem_Repeat	238453	238497	90	+	.	.
scaffold1610	subtractBed	intrn	265847	265904	.	-	.	Parent=CGI_10016504;
	scaffold1610	TRF	Tandem_Repeat	265847	265904	116	+	.	.
scaffold1610	subtractBed	intrn	265951	265978	.	-	.	Parent=CGI_10016504;
	scaffold1610	TRF	Tandem_Repeat	265951	265978	56	+	.	.
scaffold1610	subtractBed	intrn	275940	276001	.	-	.	Parent=CGI_10016506;
	scaffold1610	TRF	Tandem_Repeat	275940	276001	124	+	.	.
scaffold1610	subtractBed	intrn	277727	277784	.	-	.	Parent=CGI_10016506;
	scaffold1610	TRF	Tandem_Repeat	277727	277784	116	+	.	.
scaffold1610	subtractBed	intrn	284498	284547	.	+	.	Parent=CGI_10016507;
	scaffold1610	TRF	Tandem_Repeat	284498	284547	57	+	.	.
scaffold1610	subtractBed	intrn	284498	284547	.	+	.	Parent=CGI_10016507;
	scaffold1610	TRF	Tandem_Repeat	284498	284547	55	+	.	.
scaffold1610	subtractBed	intrn	284571	285364	.	+	.	Parent=CGI_10016507;
	scaffold1610	TRF	Tandem_Repeat	284571	285364	1097	+	.	.
scaffold1610	subtractBed	intrn	298067	298919	.	+	.	Parent=CGI_10016507;
	scaffold1610	TRF	Tandem_Repeat	298067	298919	1016	+	.	.
scaffold1610	subtractBed	intrn	298941	299312	.	+	.	Parent=CGI_10016507;
	scaffold1610	TRF	Tandem_Repeat	298941	299312	488	+	.	.
scaffold1610	subtractBed	intrn	317751	317785	.	+	.	Parent=CGI_10016510;
	scaffold1610	TRF	Tandem_Repeat	317751	317785	61	+	.	.
scaffold1610	subtractBed	intrn	317955	319154	.	+	.	Parent=CGI_10016510;
	scaffold1610	TRF	Tandem_Repeat	317955	319154	1845	+	.	.
scaffold1610	subtractBed	intrn	330596	330637	.	+	.	Parent=CGI_10016510;
	scaffold1610	TRF	Tandem_Repeat	330596	330637	84	+	.	.
scaffold1610	subtractBed	intrn	345490	345537	.	+	.	Parent=CGI_10016512;
	scaffold1610	TRF	Tandem_Repeat	345490	345537	96	+	.	.
scaffold1610	subtractBed	intrn	361636	361688	.	+	.	Parent=CGI_10016513;
	scaffold1610	TRF	Tandem_Repeat	361636	361688	106	+	.	.
scaffold1610	subtractBed	intrn	426359	427155	.	+	.	Parent=CGI_10016516;
	scaffold1610	TRF	Tandem_Repeat	426359	427155	1011	+	.	.
scaffold1611	subtractBed	intrn	3681	3707	.	-	.	Parent=CGI_10014322;
	scaffold1611	TRF	Tandem_Repeat	3681	3707	54	+	.	.
scaffold1611	subtractBed	intrn	54808	54834	.	+	.	Parent=CGI_10014324;
	scaffold1611	TRF	Tandem_Repeat	54808	54834	54	+	.	.
scaffold1611	subtractBed	intrn	235477	235527	.	-	.	Parent=CGI_10014328;
	scaffold1611	TRF	Tandem_Repeat	235477	235527	102	+	.	.
scaffold1611	subtractBed	intrn	243419	243500	.	-	.	Parent=CGI_10014328;
	scaffold1611	TRF	Tandem_Repeat	243419	243500	62	+	.	.
scaffold1611	subtractBed	intrn	249859	249901	.	-	.	Parent=CGI_10014328;
	scaffold1611	TRF	Tandem_Repeat	249859	249901	86	+	.	.
scaffold1611	subtractBed	intrn	250226	250262	.	-	.	Parent=CGI_10014328;
	scaffold1611	TRF	Tandem_Repeat	250226	250262	74	+	.	.
scaffold1611	subtractBed	intrn	275911	275955	.	-	.	Parent=CGI_10014329;
	scaffold1611	TRF	Tandem_Repeat	275911	275955	90	+	.	.
scaffold1611	subtractBed	intrn	297896	297953	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	297896	297953	116	+	.	.
scaffold1611	subtractBed	intrn	298475	298696	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	298475	298696	426	+	.	.
scaffold1611	subtractBed	intrn	298746	298910	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	298746	298910	222	+	.	.
scaffold1611	subtractBed	intrn	320745	320880	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	320745	320880	119	+	.	.
scaffold1611	subtractBed	intrn	320736	320924	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	320736	320924	141	+	.	.
scaffold1611	subtractBed	intrn	320763	320924	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	320763	320924	114	+	.	.
scaffold1611	subtractBed	intrn	327979	328038	.	+	.	Parent=CGI_10014332;
	scaffold1611	TRF	Tandem_Repeat	327979	328038	111	+	.	.
scaffold1611	subtractBed	intrn	363715	363758	.	+	.	Parent=CGI_10014334;
	scaffold1611	TRF	Tandem_Repeat	363715	363758	88	+	.	.
scaffold1611	subtractBed	intrn	364953	365444	.	+	.	Parent=CGI_10014334;
	scaffold1611	WUBlastX	DNA_TcMar-Fot1	364953	365444	83	-	.	.
scaffold1611	subtractBed	intrn	365040	365453	.	+	.	Parent=CGI_10014334;
	scaffold1611	WUBlastX	DNA_TcMar-Fot1	365040	365453	308	-	.	.
scaffold1611	subtractBed	intrn	365470	366165	.	+	.	Parent=CGI_10014334;
	scaffold1611	WUBlastX	DNA_TcMar-Fot1	365470	366165	420	-	.	.
scaffold1616	subtractBed	intrn	59756	60031	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_Penelope	59756	60031	23	-	.	.
scaffold1616	subtractBed	intrn	60431	60730	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_Penelope	60431	60730	46	-	.	.
scaffold1616	subtractBed	intrn	60043	60405	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_Penelope	60043	60405	29	-	.	.
scaffold1616	subtractBed	intrn	60175	60624	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_Penelope	60175	60624	124	-	.	.
scaffold1616	subtractBed	intrn	62652	63092	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_RTE-X	62652	63092	57	+	.	.
scaffold1616	subtractBed	intrn	62658	62984	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_RTE-X	62658	62984	97	+	.	.
scaffold1616	subtractBed	intrn	69901	70584	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_L2	69901	70584	107	-	.	.
scaffold1616	subtractBed	intrn	70024	70686	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_L2	70024	70686	49	-	.	.
scaffold1616	subtractBed	intrn	72922	73506	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_L1-Tx1	72922	73506	31	-	.	.
scaffold1616	subtractBed	intrn	73015	73506	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LINE_L1-Tx1	73015	73506	44	-	.	.
scaffold1616	subtractBed	intrn	87319	87400	.	+	.	Parent=CGI_10009076;
	scaffold1616	TRF	Tandem_Repeat	87319	87400	58	+	.	.
scaffold1616	subtractBed	intrn	91700	93172	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_DIRS	91700	93172	834	+	.	.
scaffold1616	subtractBed	intrn	91504	91638	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_DIRS	91504	91638	57	+	.	.
scaffold1616	subtractBed	intrn	91676	93766	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_DIRS	91676	93766	513	+	.	.
scaffold1616	subtractBed	intrn	91553	92269	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_ERVL	91553	92269	89	+	.	.
scaffold1616	subtractBed	intrn	93787	94353	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_DIRS	93787	94353	264	+	.	.
scaffold1616	subtractBed	intrn	91411	91638	.	+	.	Parent=CGI_10009076;
	scaffold1616	WUBlastX	LTR_DIRS	91411	91638	50	+	.	.
scaffold1616	subtractBed	intrn	100643	101566	.	+	.	Parent=CGI_10009076;
	scaffold1616	TRF	Tandem_Repeat	100643	101566	1266	+	.	.
scaffold1619	subtractBed	intrn	32372	32401	.	-	.	Parent=CGI_10010216;
	scaffold1619	TRF	Tandem_Repeat	32372	32401	60	+	.	.
scaffold1619	subtractBed	intrn	80019	80252	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	80019	80252	276	+	.	.
scaffold1619	subtractBed	intrn	86305	86562	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	86305	86562	399	+	.	.
scaffold1619	subtractBed	intrn	87605	87802	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	87605	87802	169	+	.	.
scaffold1619	subtractBed	intrn	88644	88731	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	88644	88731	108	+	.	.
scaffold1619	subtractBed	intrn	88925	88958	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	88925	88958	50	+	.	.
scaffold1619	subtractBed	intrn	95377	95915	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	95347	95915	958	+	.	.
scaffold1619	subtractBed	intrn	96535	96851	.	+	.	Parent=CGI_10010218;
	scaffold1619	TRF	Tandem_Repeat	96513	96851	538	+	.	.
scaffold1619	subtractBed	intrn	240792	240799	.	+	.	Parent=CGI_10010223;
	scaffold1619	WUBlastX	DNA_Kolobok-Hyd	240731	240799	27	+	.	.
scaffold1619	subtractBed	intrn	241651	241688	.	+	.	Parent=CGI_10010223;
	scaffold1619	TRF	Tandem_Repeat	241651	241688	67	+	.	.
scaffold162	subtractBed	intrn	52221	52271	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	52221	52271	57	+	.	.
scaffold162	subtractBed	intrn	52220	52267	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	52220	52267	51	+	.	.
scaffold162	subtractBed	intrn	57932	58069	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	57932	58069	147	+	.	.
scaffold162	subtractBed	intrn	57933	58068	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	57933	58068	79	+	.	.
scaffold162	subtractBed	intrn	59978	60370	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	59978	60370	786	+	.	.
scaffold162	subtractBed	intrn	61271	61305	.	-	.	Parent=CGI_10014088;
	scaffold162	TRF	Tandem_Repeat	61271	61305	70	+	.	.
scaffold162	subtractBed	intrn	51995	52219	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1	51995	52219	94	-	.	.
scaffold162	subtractBed	intrn	54512	55393	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	54512	55393	397	+	.	.
scaffold162	subtractBed	intrn	55581	55922	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	55581	55922	64	+	.	.
scaffold162	subtractBed	intrn	53859	54092	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	53859	54092	132	+	.	.
scaffold162	subtractBed	intrn	50132	50389	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1-Tx1	50132	50389	24	-	.	.
scaffold162	subtractBed	intrn	53772	54086	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	53772	54086	100	+	.	.
scaffold162	subtractBed	intrn	51201	52019	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1-Tx1	51201	52019	469	-	.	.
scaffold162	subtractBed	intrn	51947	52180	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1-Tx1	51947	52180	172	-	.	.
scaffold162	subtractBed	intrn	54314	55303	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	54314	55303	151	+	.	.
scaffold162	subtractBed	intrn	50658	52097	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1-Tx1	50658	52097	207	-	.	.
scaffold162	subtractBed	intrn	53005	53100	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L2	53005	53100	30	-	.	.
scaffold162	subtractBed	intrn	54515	55552	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	54515	55552	309	+	.	.
scaffold162	subtractBed	intrn	50374	50583	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_L1-Tx1	50374	50583	39	-	.	.
scaffold162	subtractBed	intrn	55629	55859	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LINE_RTE-X	55629	55859	64	+	.	.
scaffold162	subtractBed	intrn	72882	73172	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LTR_Gypsy	72882	73172	61	-	.	.
scaffold162	subtractBed	intrn	73002	73175	.	-	.	Parent=CGI_10014088;
	scaffold162	WUBlastX	LTR_Gypsy-Cigr	73002	73175	68	-	.	.
scaffold162	subtractBed	intrn	129248	129280	.	-	.	Parent=CGI_10014090;
	scaffold162	TRF	Tandem_Repeat	129248	129280	66	+	.	.
scaffold162	subtractBed	intrn	130600	130626	.	-	.	Parent=CGI_10014090;
	scaffold162	TRF	Tandem_Repeat	130600	130626	54	+	.	.
scaffold162	subtractBed	intrn	129879	130352	.	-	.	Parent=CGI_10014090;
	scaffold162	WUBlastX	LINE_L1-Tx1	129879	130352	136	-	.	.
scaffold162	subtractBed	intrn	137313	137432	.	-	.	Parent=CGI_10014090;
	scaffold162	TRF	Tandem_Repeat	137313	137432	114	+	.	.
scaffold162	subtractBed	intrn	139291	139409	.	-	.	Parent=CGI_10014090;
	scaffold162	TRF	Tandem_Repeat	139291	139409	82	+	.	.
scaffold162	subtractBed	intrn	148366	148409	.	-	.	Parent=CGI_10014090;
	scaffold162	TRF	Tandem_Repeat	148366	148409	88	+	.	.
scaffold162	subtractBed	intrn	148366	148409	.	+	.	Parent=CGI_10014091;
	scaffold162	TRF	Tandem_Repeat	148366	148409	88	+	.	.
scaffold162	subtractBed	intrn	262596	262627	.	-	.	Parent=CGI_10014094;
	scaffold162	TRF	Tandem_Repeat	262596	262627	64	+	.	.
scaffold162	subtractBed	intrn	266289	266344	.	-	.	Parent=CGI_10014094;
	scaffold162	TRF	Tandem_Repeat	266289	266344	76	+	.	.
scaffold162	subtractBed	intrn	267713	267760	.	-	.	Parent=CGI_10014094;
	scaffold162	TRF	Tandem_Repeat	267713	267760	51	+	.	.
scaffold162	subtractBed	intrn	270808	271023	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	270808	271023	127	-	.	.
scaffold162	subtractBed	intrn	271400	273580	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	271400	273580	1254	-	.	.
scaffold162	subtractBed	intrn	270802	271191	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	270802	271191	122	-	.	.
scaffold162	subtractBed	intrn	271251	271403	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	271251	271403	63	-	.	.
scaffold162	subtractBed	intrn	271307	271792	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	271307	271792	117	-	.	.
scaffold162	subtractBed	intrn	276242	276838	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	276242	276838	121	-	.	.
scaffold162	subtractBed	intrn	271221	271409	.	-	.	Parent=CGI_10014094;
	scaffold162	WUBlastX	LTR_Gypsy	271221	271409	58	-	.	.
scaffold162	subtractBed	intrn	347070	347120	.	+	.	Parent=CGI_10014103;
	scaffold162	TRF	Tandem_Repeat	347070	347120	102	+	.	.
scaffold162	subtractBed	intrn	365348	365503	.	-	.	Parent=CGI_10014105;
	scaffold162	TRF	Tandem_Repeat	365348	365503	102	+	.	.
scaffold162	subtractBed	intrn	375079	375219	.	-	.	Parent=CGI_10014105;
	scaffold162	TRF	Tandem_Repeat	375079	375219	158	+	.	.
scaffold162	subtractBed	intrn	384522	384916	.	-	.	Parent=CGI_10014105;
	scaffold162	TRF	Tandem_Repeat	384522	384916	502	+	.	.
scaffold1623	subtractBed	intrn	4598	4670	.	+	.	Parent=CGI_10002853;
	scaffold1623	TRF	Tandem_Repeat	4598	4670	128	+	.	.
scaffold1623	subtractBed	intrn	12520	12774	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	DNA_Sola	12520	12774	52	-	.	.
scaffold1623	subtractBed	intrn	13035	13094	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	DNA_Sola	13035	13094	20	-	.	.
scaffold1623	subtractBed	intrn	9098	9133	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	LINE_RTE-BovB	9098	9133	20	-	.	.
scaffold1623	subtractBed	intrn	9382	9417	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	LINE_RTE-BovB	9382	9417	20	-	.	.
scaffold1623	subtractBed	intrn	8685	9074	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	LINE_RTE-BovB	8685	9074	108	-	.	.
scaffold1623	subtractBed	intrn	14447	14926	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	RC_Helitron	14447	14926	106	+	.	.
scaffold1623	subtractBed	intrn	16030	16191	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	DNA_Harbinger	16030	16191	70	-	.	.
scaffold1623	subtractBed	intrn	14528	15409	.	+	.	Parent=CGI_10002853;
	scaffold1623	WUBlastX	RC_Helitron	14528	15409	153	+	.	.
scaffold1623	subtractBed	intrn	18198	18987	.	+	.	Parent=CGI_10002853;
	scaffold1623	TRF	Tandem_Repeat	18198	18987	972	+	.	.
scaffold1623	subtractBed	intrn	19018	19085	.	+	.	Parent=CGI_10002853;
	scaffold1623	TRF	Tandem_Repeat	19018	19085	109	+	.	.
scaffold1625	subtractBed	intrn	51548	51767	.	+	.	Parent=CGI_10007528;
	scaffold1625	TRF	Tandem_Repeat	51548	51767	368	+	.	.
scaffold1625	subtractBed	intrn	51950	52263	.	+	.	Parent=CGI_10007528;
	scaffold1625	TRF	Tandem_Repeat	51950	52263	171	+	.	.
scaffold1625	subtractBed	intrn	52039	52659	.	+	.	Parent=CGI_10007528;
	scaffold1625	TRF	Tandem_Repeat	52039	52659	394	+	.	.
scaffold1625	subtractBed	intrn	52276	52564	.	+	.	Parent=CGI_10007528;
	scaffold1625	TRF	Tandem_Repeat	52276	52564	200	+	.	.
scaffold1625	subtractBed	intrn	52546	52681	.	+	.	Parent=CGI_10007528;
	scaffold1625	TRF	Tandem_Repeat	52546	52681	202	+	.	.
scaffold1625	subtractBed	intrn	165742	166722	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	DNA_TcMar-Tc1	165742	166722	416	-	.	.
scaffold1625	subtractBed	intrn	169501	169567	.	-	.	Parent=CGI_10007533;
	scaffold1625	TRF	Tandem_Repeat	169501	169567	116	+	.	.
scaffold1625	subtractBed	intrn	169606	169696	.	-	.	Parent=CGI_10007533;
	scaffold1625	TRF	Tandem_Repeat	169606	169696	141	+	.	.
scaffold1625	subtractBed	intrn	170269	170391	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170269	170391	40	-	.	.
scaffold1625	subtractBed	intrn	169785	170144	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	169785	170144	40	-	.	.
scaffold1625	subtractBed	intrn	169773	170072	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	169773	170072	54	-	.	.
scaffold1625	subtractBed	intrn	170448	170879	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170448	170879	189	-	.	.
scaffold1625	subtractBed	intrn	171968	172018	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	171968	172018	28	-	.	.
scaffold1625	subtractBed	intrn	170379	170801	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170379	170801	71	-	.	.
scaffold1625	subtractBed	intrn	171688	171828	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	171688	171828	34	-	.	.
scaffold1625	subtractBed	intrn	170255	170308	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170255	170308	39	-	.	.
scaffold1625	subtractBed	intrn	170191	170367	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170191	170367	20	-	.	.
scaffold1625	subtractBed	intrn	169737	169952	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	169737	169952	26	-	.	.
scaffold1625	subtractBed	intrn	170448	171479	.	-	.	Parent=CGI_10007533;
	scaffold1625	WUBlastX	LINE_RTE-X	170448	171479	57	-	.	.
scaffold1627	subtractBed	intrn	4711	4788	.	+	.	Parent=CGI_10009559;
	scaffold1627	TRF	Tandem_Repeat	4711	4788	138	+	.	.
scaffold1627	subtractBed	intrn	9443	9549	.	+	.	Parent=CGI_10009559;
	scaffold1627	TRF	Tandem_Repeat	9443	9549	74	+	.	.
scaffold1627	subtractBed	intrn	9444	9550	.	+	.	Parent=CGI_10009559;
	scaffold1627	TRF	Tandem_Repeat	9444	9550	89	+	.	.
scaffold1627	subtractBed	intrn	9451	9559	.	+	.	Parent=CGI_10009559;
	scaffold1627	TRF	Tandem_Repeat	9451	9559	107	+	.	.
scaffold1627	subtractBed	intrn	55546	55592	.	+	.	Parent=CGI_10009562;
	scaffold1627	TRF	Tandem_Repeat	55546	55592	62	+	.	.
scaffold1627	subtractBed	intrn	132392	132437	.	-	.	Parent=CGI_10009564;
	scaffold1627	TRF	Tandem_Repeat	132392	132437	76	+	.	.
scaffold1627	subtractBed	intrn	138175	138254	.	-	.	Parent=CGI_10009564;
	scaffold1627	TRF	Tandem_Repeat	138175	138254	83	+	.	.
scaffold1627	subtractBed	intrn	138838	139196	.	-	.	Parent=CGI_10009564;
	scaffold1627	TRF	Tandem_Repeat	138838	139196	250	+	.	.
scaffold1627	subtractBed	intrn	138845	139197	.	-	.	Parent=CGI_10009564;
	scaffold1627	TRF	Tandem_Repeat	138845	139197	283	+	.	.
scaffold1627	subtractBed	intrn	158163	158240	.	+	.	Parent=CGI_10009565;
	scaffold1627	TRF	Tandem_Repeat	158163	158240	156	+	.	.
scaffold1627	subtractBed	intrn	183927	183965	.	-	.	Parent=CGI_10009567;
	scaffold1627	TRF	Tandem_Repeat	183927	183965	78	+	.	.
scaffold1627	subtractBed	intrn	203776	203847	.	-	.	Parent=CGI_10009567;
	scaffold1627	TRF	Tandem_Repeat	203776	203847	117	+	.	.
scaffold1627	subtractBed	intrn	208057	208266	.	-	.	Parent=CGI_10009567;
	scaffold1627	WUBlastX	DNA_TcMar-Tc1	208057	208266	48	+	.	.
scaffold163	subtractBed	intrn	18912	19206	.	+	.	Parent=CGI_10018605;
	scaffold163	TRF	Tandem_Repeat	18912	19206	455	+	.	.
scaffold163	subtractBed	intrn	23219	23280	.	+	.	Parent=CGI_10018605;
	scaffold163	TRF	Tandem_Repeat	23219	23280	81	+	.	.
scaffold163	subtractBed	intrn	24725	26204	.	+	.	Parent=CGI_10018605;
	scaffold163	TRF	Tandem_Repeat	24725	26204	1824	+	.	.
scaffold163	subtractBed	intrn	53507	53541	.	+	.	Parent=CGI_10018608;
	scaffold163	TRF	Tandem_Repeat	53507	53541	70	+	.	.
scaffold163	subtractBed	intrn	99550	99580	.	-	.	Parent=CGI_10018609;
	scaffold163	TRF	Tandem_Repeat	99550	99580	53	+	.	.
scaffold163	subtractBed	intrn	102288	102379	.	-	.	Parent=CGI_10018609;
	scaffold163	TRF	Tandem_Repeat	102288	102379	114	+	.	.
scaffold163	subtractBed	intrn	108762	109557	.	+	.	Parent=CGI_10018610;
	scaffold163	TRF	Tandem_Repeat	108762	109557	1220	+	.	.
scaffold163	subtractBed	intrn	109614	110210	.	+	.	Parent=CGI_10018610;
	scaffold163	WUBlastX	LTR_Ngaro	109614	110210	131	+	.	.
scaffold163	subtractBed	intrn	110208	111548	.	+	.	Parent=CGI_10018610;
	scaffold163	WUBlastX	LTR_Ngaro	110208	111548	824	+	.	.
scaffold163	subtractBed	intrn	117082	117549	.	+	.	Parent=CGI_10018612;
	scaffold163	WUBlastX	LINE_Penelope	117082	117549	118	-	.	.
scaffold163	subtractBed	intrn	113612	116365	.	+	.	Parent=CGI_10018612;
	scaffold163	WUBlastX	LINE_L1-Tx1	113612	116365	1689	+	.	.
scaffold163	subtractBed	intrn	122905	122948	.	+	.	Parent=CGI_10018612;
	scaffold163	TRF	Tandem_Repeat	122905	122948	79	+	.	.
scaffold163	subtractBed	intrn	122948	122978	.	+	.	Parent=CGI_10018612;
	scaffold163	TRF	Tandem_Repeat	122948	122978	53	+	.	.
scaffold163	subtractBed	intrn	127717	127754	.	+	.	Parent=CGI_10018612;
	scaffold163	TRF	Tandem_Repeat	127717	127754	76	+	.	.
scaffold163	subtractBed	intrn	154502	154534	.	-	.	Parent=CGI_10018613;
	scaffold163	TRF	Tandem_Repeat	154502	154534	57	+	.	.
scaffold163	subtractBed	intrn	174662	174764	.	-	.	Parent=CGI_10018615;
	scaffold163	TRF	Tandem_Repeat	174662	174764	102	+	.	.
scaffold163	subtractBed	intrn	179663	179723	.	-	.	Parent=CGI_10018615;
	scaffold163	TRF	Tandem_Repeat	179663	179723	122	+	.	.
scaffold163	subtractBed	intrn	179856	179885	.	-	.	Parent=CGI_10018615;
	scaffold163	TRF	Tandem_Repeat	179856	179885	51	+	.	.
scaffold163	subtractBed	intrn	174662	174764	.	+	.	Parent=CGI_10018616;
	scaffold163	TRF	Tandem_Repeat	174662	174764	102	+	.	.
scaffold163	subtractBed	intrn	337746	337946	.	+	.	Parent=CGI_10018622;
	scaffold163	TRF	Tandem_Repeat	337746	337946	197	+	.	.
scaffold163	subtractBed	intrn	337746	337946	.	+	.	Parent=CGI_10018622;
	scaffold163	TRF	Tandem_Repeat	337746	337946	204	+	.	.
scaffold163	subtractBed	intrn	347841	347898	.	+	.	Parent=CGI_10018622;
	scaffold163	TRF	Tandem_Repeat	347841	347898	91	+	.	.
scaffold163	subtractBed	intrn	347842	347895	.	+	.	Parent=CGI_10018622;
	scaffold163	TRF	Tandem_Repeat	347842	347895	56	+	.	.
scaffold163	subtractBed	intrn	349277	350122	.	+	.	Parent=CGI_10018622;
	scaffold163	TRF	Tandem_Repeat	349277	350122	1160	+	.	.
scaffold163	subtractBed	intrn	363981	364006	.	+	.	Parent=CGI_10018623;
	scaffold163	TRF	Tandem_Repeat	363981	364006	52	+	.	.
scaffold163	subtractBed	intrn	442105	442134	.	+	.	Parent=CGI_10018629;
	scaffold163	TRF	Tandem_Repeat	442105	442134	51	+	.	.
scaffold163	subtractBed	intrn	449961	450556	.	+	.	Parent=CGI_10018629;
	scaffold163	TRF	Tandem_Repeat	449961	450556	834	+	.	.
scaffold163	subtractBed	intrn	471348	472043	.	+	.	Parent=CGI_10018629;
	scaffold163	TRF	Tandem_Repeat	471348	472043	1148	+	.	.
scaffold163	subtractBed	intrn	476425	476901	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	476425	476997	38	+	.	.
scaffold163	subtractBed	intrn	476434	476898	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	476434	476898	167	+	.	.
scaffold163	subtractBed	intrn	476167	476901	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	476053	476913	38	+	.	.
scaffold163	subtractBed	intrn	476329	476877	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	476329	476877	59	+	.	.
scaffold163	subtractBed	intrn	477239	477280	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	477239	477280	30	+	.	.
scaffold163	subtractBed	intrn	479587	479642	.	+	.	Parent=CGI_10018629;
	scaffold163	TRF	Tandem_Repeat	479587	479642	62	+	.	.
scaffold163	subtractBed	intrn	479584	479638	.	+	.	Parent=CGI_10018629;
	scaffold163	TRF	Tandem_Repeat	479584	479638	56	+	.	.
scaffold163	subtractBed	intrn	479811	480281	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	479811	480281	351	+	.	.
scaffold163	subtractBed	intrn	482018	482692	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	482018	482692	402	+	.	.
scaffold163	subtractBed	intrn	480283	482130	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy-Cigr	480283	482130	822	+	.	.
scaffold163	subtractBed	intrn	477873	477931	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	477731	477931	41	+	.	.
scaffold163	subtractBed	intrn	479679	480314	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	479679	480314	300	+	.	.
scaffold163	subtractBed	intrn	477873	478108	.	+	.	Parent=CGI_10018629;
	scaffold163	WUBlastX	LTR_Gypsy	477755	478108	36	+	.	.
scaffold163	subtractBed	intrn	487295	488326	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy-Troyk	487295	488326	943	+	.	.
scaffold163	subtractBed	intrn	488264	490780	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy-Troyk	488264	490780	2601	+	.	.
scaffold163	subtractBed	intrn	490887	491460	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy-Troyk	490887	491471	473	+	.	.
scaffold163	subtractBed	intrn	490792	490881	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy	490792	490881	69	+	.	.
scaffold163	subtractBed	intrn	487856	489790	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy	487856	489790	1027	+	.	.
scaffold163	subtractBed	intrn	491456	491460	.	+	.	Parent=CGI_10018630;
	scaffold163	WUBlastX	LTR_Gypsy-Troyk	491456	491980	168	+	.	.
scaffold163	subtractBed	intrn	502753	502866	.	-	.	Parent=CGI_10018631;
	scaffold163	WUBlastX	DNA_Harbinger	502753	502866	116	-	.	.
scaffold163	subtractBed	intrn	502753	502866	.	+	.	Parent=CGI_10018632;
	scaffold163	WUBlastX	DNA_Harbinger	502753	502866	116	-	.	.
scaffold163	subtractBed	intrn	512694	512740	.	-	.	Parent=CGI_10018633;
	scaffold163	TRF	Tandem_Repeat	512694	512740	85	+	.	.
scaffold163	subtractBed	intrn	516087	516132	.	-	.	Parent=CGI_10018633;
	scaffold163	TRF	Tandem_Repeat	516087	516132	92	+	.	.
scaffold163	subtractBed	intrn	558987	559059	.	+	.	Parent=CGI_10018634;
	scaffold163	TRF	Tandem_Repeat	558987	559059	128	+	.	.
scaffold1630	subtractBed	intrn	5666	5690	.	+	.	Parent=CGI_10013416;
	scaffold1630	TRF	Tandem_Repeat	5666	5690	50	+	.	.
scaffold1630	subtractBed	intrn	40105	40140	.	+	.	Parent=CGI_10013417;
	scaffold1630	TRF	Tandem_Repeat	40105	40140	72	+	.	.
scaffold1630	subtractBed	intrn	42637	42831	.	+	.	Parent=CGI_10013417;
	scaffold1630	TRF	Tandem_Repeat	42637	42831	119	+	.	.
scaffold1630	subtractBed	intrn	42743	42856	.	+	.	Parent=CGI_10013417;
	scaffold1630	TRF	Tandem_Repeat	42743	42856	102	+	.	.
scaffold1630	subtractBed	intrn	58636	58693	.	-	.	Parent=CGI_10013419;
	scaffold1630	TRF	Tandem_Repeat	58636	58693	116	+	.	.
scaffold1630	subtractBed	intrn	68956	68998	.	+	.	Parent=CGI_10013420;
	scaffold1630	TRF	Tandem_Repeat	68956	68998	86	+	.	.
scaffold1630	subtractBed	intrn	80247	80402	.	+	.	Parent=CGI_10013420;
	scaffold1630	TRF	Tandem_Repeat	80247	80402	136	+	.	.
scaffold1630	subtractBed	intrn	89608	89681	.	-	.	Parent=CGI_10013421;
	scaffold1630	TRF	Tandem_Repeat	89608	89681	112	+	.	.
scaffold1630	subtractBed	intrn	90560	90595	.	-	.	Parent=CGI_10013421;
	scaffold1630	TRF	Tandem_Repeat	90560	90595	72	+	.	.
scaffold1630	subtractBed	intrn	91110	91154	.	-	.	Parent=CGI_10013421;
	scaffold1630	TRF	Tandem_Repeat	91110	91154	90	+	.	.
scaffold1630	subtractBed	intrn	99610	99884	.	-	.	Parent=CGI_10013423;
	scaffold1630	TRF	Tandem_Repeat	99610	99899	424	+	.	.
scaffold1630	subtractBed	intrn	209397	209858	.	-	.	Parent=CGI_10013425;
	scaffold1630	WUBlastX	DNA_hAT	209397	209858	122	-	.	.
scaffold1630	subtractBed	intrn	210030	210818	.	-	.	Parent=CGI_10013425;
	scaffold1630	WUBlastX	DNA_hAT	210030	210818	238	-	.	.
scaffold1630	subtractBed	intrn	209316	209945	.	-	.	Parent=CGI_10013425;
	scaffold1630	WUBlastX	DNA_hAT	209316	209945	77	-	.	.
scaffold1630	subtractBed	intrn	298974	299045	.	-	.	Parent=CGI_10013427;
	scaffold1630	TRF	Tandem_Repeat	298974	299045	144	+	.	.
scaffold1630	subtractBed	intrn	323536	323588	.	+	.	Parent=CGI_10013428;
	scaffold1630	TRF	Tandem_Repeat	323536	323588	106	+	.	.
scaffold1630	subtractBed	intrn	324244	324669	.	+	.	Parent=CGI_10013428;
	scaffold1630	TRF	Tandem_Repeat	324244	324684	584	+	.	.
scaffold1630	subtractBed	intrn	325152	325199	.	+	.	Parent=CGI_10013428;
	scaffold1630	TRF	Tandem_Repeat	325152	325199	96	+	.	.
scaffold1630	subtractBed	intrn	329173	329228	.	-	.	Parent=CGI_10013429;
	scaffold1630	TRF	Tandem_Repeat	329173	329228	94	+	.	.
scaffold1630	subtractBed	intrn	339774	339798	.	-	.	Parent=CGI_10013429;
	scaffold1630	TRF	Tandem_Repeat	339774	339798	50	+	.	.
scaffold1631	subtractBed	intrn	132007	132052	.	-	.	Parent=CGI_10007201;
	scaffold1631	TRF	Tandem_Repeat	132007	132052	92	+	.	.
scaffold1631	subtractBed	intrn	137286	137344	.	-	.	Parent=CGI_10007201;
	scaffold1631	TRF	Tandem_Repeat	137286	137344	109	+	.	.
scaffold1631	subtractBed	intrn	139126	139224	.	-	.	Parent=CGI_10007201;
	scaffold1631	TRF	Tandem_Repeat	139126	139224	110	+	.	.
scaffold1631	subtractBed	intrn	166002	167453	.	-	.	Parent=CGI_10007204;
	scaffold1631	WUBlastX	LTR_Pao	166002	167453	1164	-	.	.
scaffold1631	subtractBed	intrn	167350	168267	.	-	.	Parent=CGI_10007204;
	scaffold1631	WUBlastX	LTR_Pao	167350	168267	610	-	.	.
scaffold1632	subtractBed	intrn	171154	171188	.	-	.	Parent=CGI_10008053;
	scaffold1632	TRF	Tandem_Repeat	171154	171188	70	+	.	.
scaffold1632	subtractBed	intrn	178419	178462	.	-	.	Parent=CGI_10008053;
	scaffold1632	TRF	Tandem_Repeat	178419	178462	72	+	.	.
scaffold1632	subtractBed	intrn	181555	181888	.	-	.	Parent=CGI_10008053;
	scaffold1632	TRF	Tandem_Repeat	181555	181888	515	+	.	.
scaffold1632	subtractBed	intrn	193219	193268	.	-	.	Parent=CGI_10008053;
	scaffold1632	TRF	Tandem_Repeat	193219	193268	55	+	.	.
scaffold1632	subtractBed	intrn	193219	193272	.	-	.	Parent=CGI_10008053;
	scaffold1632	TRF	Tandem_Repeat	193219	193272	60	+	.	.
scaffold1633	subtractBed	intrn	35431	35493	.	+	.	Parent=CGI_10012653;
	scaffold1633	TRF	Tandem_Repeat	35431	35493	94	+	.	.
scaffold1633	subtractBed	intrn	38972	39039	.	+	.	Parent=CGI_10012653;
	scaffold1633	TRF	Tandem_Repeat	38972	39039	136	+	.	.
scaffold1633	subtractBed	intrn	259941	259990	.	+	.	Parent=CGI_10012655;
	scaffold1633	TRF	Tandem_Repeat	259941	259990	59	+	.	.
scaffold1633	subtractBed	intrn	261505	261569	.	+	.	Parent=CGI_10012655;
	scaffold1633	TRF	Tandem_Repeat	261505	261569	130	+	.	.
scaffold1633	subtractBed	intrn	262032	263002	.	+	.	Parent=CGI_10012655;
	scaffold1633	TRF	Tandem_Repeat	262032	263002	1377	+	.	.
scaffold1634	subtractBed	intrn	3918	3960	.	+	.	Parent=CGI_10005149;
	scaffold1634	TRF	Tandem_Repeat	3918	3960	86	+	.	.
scaffold1634	subtractBed	intrn	4652	4687	.	+	.	Parent=CGI_10005149;
	scaffold1634	TRF	Tandem_Repeat	4652	4687	72	+	.	.
scaffold1634	subtractBed	intrn	7767	7835	.	+	.	Parent=CGI_10005149;
	scaffold1634	TRF	Tandem_Repeat	7767	7835	57	+	.	.
scaffold1634	subtractBed	intrn	12717	12766	.	+	.	Parent=CGI_10005149;
	scaffold1634	TRF	Tandem_Repeat	12717	12766	66	+	.	.
scaffold1634	subtractBed	intrn	12721	12767	.	+	.	Parent=CGI_10005149;
	scaffold1634	TRF	Tandem_Repeat	12721	12767	78	+	.	.
scaffold1634	subtractBed	intrn	20816	20850	.	-	.	Parent=CGI_10005150;
	scaffold1634	TRF	Tandem_Repeat	20816	20850	61	+	.	.
scaffold1634	subtractBed	intrn	25964	26149	.	-	.	Parent=CGI_10005150;
	scaffold1634	WUBlastX	LINE_Penelope	25964	26149	37	-	.	.
scaffold1634	subtractBed	intrn	83395	83745	.	+	.	Parent=CGI_10005152;
	scaffold1634	WUBlastX	LTR_Ngaro	83395	83745	90	-	.	.
scaffold1634	subtractBed	intrn	83782	84510	.	+	.	Parent=CGI_10005152;
	scaffold1634	WUBlastX	LTR_Ngaro	83782	84510	526	-	.	.
scaffold1634	subtractBed	intrn	84558	85061	.	+	.	Parent=CGI_10005152;
	scaffold1634	WUBlastX	LTR_Ngaro	84558	85061	87	-	.	.
scaffold1634	subtractBed	intrn	85112	85216	.	+	.	Parent=CGI_10005152;
	scaffold1634	WUBlastX	LTR_Ngaro	85112	85216	59	-	.	.
scaffold1634	subtractBed	intrn	84747	85079	.	+	.	Parent=CGI_10005152;
	scaffold1634	WUBlastX	LTR_Ngaro	84747	85079	155	-	.	.
scaffold1634	subtractBed	intrn	91651	91839	.	+	.	Parent=CGI_10005153;
	scaffold1634	WUBlastX	DNA_TcMar-Fot1	91651	91839	44	-	.	.
scaffold1634	subtractBed	intrn	91374	91628	.	+	.	Parent=CGI_10005153;
	scaffold1634	WUBlastX	DNA_TcMar-Fot1	91374	91628	100	-	.	.
scaffold1634	subtractBed	intrn	91308	91637	.	+	.	Parent=CGI_10005153;
	scaffold1634	WUBlastX	DNA_TcMar-Fot1	91308	91637	47	-	.	.
scaffold1634	subtractBed	intrn	118104	118142	.	-	.	Parent=CGI_10005155;
	scaffold1634	TRF	Tandem_Repeat	118104	118142	78	+	.	.
scaffold1634	subtractBed	intrn	118374	118411	.	-	.	Parent=CGI_10005155;
	scaffold1634	TRF	Tandem_Repeat	118374	118411	76	+	.	.
scaffold1634	subtractBed	intrn	119377	119415	.	-	.	Parent=CGI_10005155;
	scaffold1634	TRF	Tandem_Repeat	119377	119415	78	+	.	.
scaffold1635	subtractBed	intrn	23116	23152	.	-	.	Parent=CGI_10001870;
	scaffold1635	TRF	Tandem_Repeat	23116	23152	74	+	.	.
scaffold1637	subtractBed	intrn	10603	10651	.	+	.	Parent=CGI_10010272;
	scaffold1637	TRF	Tandem_Repeat	10603	10651	57	+	.	.
scaffold1637	subtractBed	intrn	43707	43847	.	-	.	Parent=CGI_10010275;
	scaffold1637	TRF	Tandem_Repeat	43707	43861	247	+	.	.
scaffold1637	subtractBed	intrn	70400	70431	.	-	.	Parent=CGI_10010276;
	scaffold1637	TRF	Tandem_Repeat	70400	70431	64	+	.	.
scaffold1637	subtractBed	intrn	101421	101497	.	-	.	Parent=CGI_10010277;
	scaffold1637	TRF	Tandem_Repeat	101421	101497	154	+	.	.
scaffold1637	subtractBed	intrn	152499	153405	.	-	.	Parent=CGI_10010279;
	scaffold1637	TRF	Tandem_Repeat	152499	153405	1235	+	.	.
scaffold1637	subtractBed	intrn	154028	154074	.	-	.	Parent=CGI_10010279;
	scaffold1637	TRF	Tandem_Repeat	154028	154074	67	+	.	.
scaffold1637	subtractBed	intrn	162592	162625	.	-	.	Parent=CGI_10010279;
	scaffold1637	TRF	Tandem_Repeat	162592	162625	59	+	.	.
scaffold1637	subtractBed	intrn	165882	165911	.	-	.	Parent=CGI_10010279;
	scaffold1637	TRF	Tandem_Repeat	165882	165911	51	+	.	.
scaffold1637	subtractBed	intrn	190628	190691	.	-	.	Parent=CGI_10010279;
	scaffold1637	TRF	Tandem_Repeat	190628	190691	83	+	.	.
scaffold1637	subtractBed	intrn	185799	186137	.	-	.	Parent=CGI_10010279;
	scaffold1637	WUBlastX	DNA_TcMar-Marin	185799	186137	55	+	.	.
scaffold1637	subtractBed	intrn	223197	223233	.	-	.	Parent=CGI_10010282;
	scaffold1637	TRF	Tandem_Repeat	223197	223233	65	+	.	.
scaffold1637	subtractBed	intrn	227646	227883	.	-	.	Parent=CGI_10010282;
	scaffold1637	TRF	Tandem_Repeat	227646	227883	210	+	.	.
scaffold1637	subtractBed	intrn	255518	255572	.	+	.	Parent=CGI_10010284;
	scaffold1637	TRF	Tandem_Repeat	255518	255572	74	+	.	.
scaffold1637	subtractBed	intrn	255522	255556	.	+	.	Parent=CGI_10010284;
	scaffold1637	TRF	Tandem_Repeat	255522	255556	70	+	.	.
scaffold1638	subtractBed	intrn	67884	67926	.	+	.	Parent=CGI_10007421;
	scaffold1638	TRF	Tandem_Repeat	67884	67926	86	+	.	.
scaffold1638	subtractBed	intrn	76304	76342	.	-	.	Parent=CGI_10007422;
	scaffold1638	TRF	Tandem_Repeat	76304	76342	78	+	.	.
scaffold1638	subtractBed	intrn	79813	79865	.	-	.	Parent=CGI_10007422;
	scaffold1638	TRF	Tandem_Repeat	79813	79865	92	+	.	.
scaffold1639	subtractBed	intrn	30174	30209	.	+	.	Parent=CGI_10005437;
	scaffold1639	TRF	Tandem_Repeat	30174	30209	54	+	.	.
scaffold1639	subtractBed	intrn	37584	37826	.	+	.	Parent=CGI_10005437;
	scaffold1639	WUBlastX	DNA_TcMar-Tc1	37584	37826	120	+	.	.
scaffold1639	subtractBed	intrn	35354	35710	.	+	.	Parent=CGI_10005437;
	scaffold1639	WUBlastX	DNA_Harbinger	35354	35710	103	+	.	.
scaffold1639	subtractBed	intrn	34573	35022	.	+	.	Parent=CGI_10005437;
	scaffold1639	WUBlastX	DNA_Harbinger	34573	35022	60	+	.	.
scaffold1639	subtractBed	intrn	34901	35188	.	+	.	Parent=CGI_10005437;
	scaffold1639	WUBlastX	DNA_Harbinger	34901	35188	54	+	.	.
scaffold1639	subtractBed	intrn	37452	37826	.	+	.	Parent=CGI_10005437;
	scaffold1639	WUBlastX	DNA_TcMar-Tc1	37452	37826	106	+	.	.
scaffold1639	subtractBed	intrn	83460	83498	.	-	.	Parent=CGI_10005439;
	scaffold1639	WUBlastX	DNA_IS4EU	83460	83885	86	-	.	.
scaffold1639	subtractBed	intrn	123984	124109	.	-	.	Parent=CGI_10005443;
	scaffold1639	WUBlastX	DNA_Maverick	123984	124109	38	-	.	.
scaffold1639	subtractBed	intrn	126207	126256	.	-	.	Parent=CGI_10005443;
	scaffold1639	TRF	Tandem_Repeat	126207	126256	55	+	.	.
scaffold164	subtractBed	intrn	48412	48516	.	-	.	Parent=CGI_10021845;
	scaffold164	TRF	Tandem_Repeat	48412	48516	94	+	.	.
scaffold164	subtractBed	intrn	49593	49698	.	-	.	Parent=CGI_10021845;
	scaffold164	TRF	Tandem_Repeat	49593	49698	107	+	.	.
scaffold164	subtractBed	intrn	52028	52934	.	-	.	Parent=CGI_10021845;
	scaffold164	TRF	Tandem_Repeat	52028	52934	1464	+	.	.
scaffold164	subtractBed	intrn	53447	53656	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53447	53656	93	-	.	.
scaffold164	subtractBed	intrn	53501	53704	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53501	53704	113	-	.	.
scaffold164	subtractBed	intrn	53360	53893	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53360	53893	67	-	.	.
scaffold164	subtractBed	intrn	54523	54720	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	54523	54720	50	-	.	.
scaffold164	subtractBed	intrn	54286	54720	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	54286	54720	49	-	.	.
scaffold164	subtractBed	intrn	53065	53130	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53065	53130	20	-	.	.
scaffold164	subtractBed	intrn	53501	53899	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53501	53899	108	-	.	.
scaffold164	subtractBed	intrn	53776	53970	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53776	53970	88	-	.	.
scaffold164	subtractBed	intrn	53776	54414	.	-	.	Parent=CGI_10021845;
	scaffold164	WUBlastX	LTR_Gypsy	53776	54414	36	-	.	.
scaffold164	subtractBed	intrn	72886	73006	.	-	.	Parent=CGI_10021847;
	scaffold164	TRF	Tandem_Repeat	72886	73006	57	+	.	.
scaffold164	subtractBed	intrn	74009	74772	.	-	.	Parent=CGI_10021847;
	scaffold164	TRF	Tandem_Repeat	74009	74772	849	+	.	.
scaffold164	subtractBed	intrn	74883	74926	.	-	.	Parent=CGI_10021847;
	scaffold164	TRF	Tandem_Repeat	74883	74926	70	+	.	.
scaffold164	subtractBed	intrn	139367	139414	.	+	.	Parent=CGI_10021848;
	scaffold164	TRF	Tandem_Repeat	139367	139414	96	+	.	.
scaffold164	subtractBed	intrn	150171	150338	.	+	.	Parent=CGI_10021850;
	scaffold164	TRF	Tandem_Repeat	150171	150338	201	+	.	.
scaffold164	subtractBed	intrn	168315	168343	.	-	.	Parent=CGI_10021852;
	scaffold164	TRF	Tandem_Repeat	168315	168343	58	+	.	.
scaffold164	subtractBed	intrn	167302	167973	.	-	.	Parent=CGI_10021852;
	scaffold164	WUBlastX	LINE_RTE-X	167302	167973	149	+	.	.
scaffold164	subtractBed	intrn	167392	167961	.	-	.	Parent=CGI_10021852;
	scaffold164	WUBlastX	LINE_RTE-X	167392	167961	168	+	.	.
scaffold164	subtractBed	intrn	177226	177391	.	+	.	Parent=CGI_10021853;
	scaffold164	TRF	Tandem_Repeat	177226	177391	163	+	.	.
scaffold164	subtractBed	intrn	177462	177875	.	+	.	Parent=CGI_10021853;
	scaffold164	TRF	Tandem_Repeat	177462	177875	250	+	.	.
scaffold164	subtractBed	intrn	177681	177885	.	+	.	Parent=CGI_10021853;
	scaffold164	TRF	Tandem_Repeat	177681	177885	238	+	.	.
scaffold164	subtractBed	intrn	179731	179931	.	+	.	Parent=CGI_10021853;
	scaffold164	TRF	Tandem_Repeat	179731	179931	384	+	.	.
scaffold164	subtractBed	intrn	222333	222668	.	+	.	Parent=CGI_10021856;
	scaffold164	TRF	Tandem_Repeat	222333	222668	381	+	.	.
scaffold164	subtractBed	intrn	236361	236450	.	+	.	Parent=CGI_10021858;
	scaffold164	TRF	Tandem_Repeat	236361	236450	173	+	.	.
scaffold164	subtractBed	intrn	255115	255170	.	-	.	Parent=CGI_10021861;
	scaffold164	TRF	Tandem_Repeat	255115	255170	112	+	.	.
scaffold164	subtractBed	intrn	257088	257332	.	-	.	Parent=CGI_10021861;
	scaffold164	TRF	Tandem_Repeat	257088	257332	157	+	.	.
scaffold164	subtractBed	intrn	257087	257332	.	-	.	Parent=CGI_10021861;
	scaffold164	TRF	Tandem_Repeat	257087	257332	402	+	.	.
scaffold164	subtractBed	intrn	258313	258402	.	-	.	Parent=CGI_10021861;
	scaffold164	TRF	Tandem_Repeat	258313	258402	63	+	.	.
scaffold164	subtractBed	intrn	258312	258421	.	-	.	Parent=CGI_10021861;
	scaffold164	TRF	Tandem_Repeat	258312	258421	202	+	.	.
scaffold164	subtractBed	intrn	298897	300160	.	-	.	Parent=CGI_10021863;
	scaffold164	TRF	Tandem_Repeat	298897	300179	1237	+	.	.
scaffold164	subtractBed	intrn	298897	300160	.	-	.	Parent=CGI_10021863;
	scaffold164	TRF	Tandem_Repeat	298897	300179	1285	+	.	.
scaffold164	subtractBed	intrn	298897	300160	.	-	.	Parent=CGI_10021863;
	scaffold164	TRF	Tandem_Repeat	298897	300179	1348	+	.	.
scaffold164	subtractBed	intrn	300705	301634	.	-	.	Parent=CGI_10021863;
	scaffold164	TRF	Tandem_Repeat	300705	301655	702	+	.	.
scaffold164	subtractBed	intrn	320368	320396	.	+	.	Parent=CGI_10021865;
	scaffold164	TRF	Tandem_Repeat	320368	320396	58	+	.	.
scaffold164	subtractBed	intrn	337378	337808	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	337378	337808	718	+	.	.
scaffold164	subtractBed	intrn	338159	338670	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	338159	338690	702	+	.	.
scaffold164	subtractBed	intrn	339243	339789	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	339243	339789	793	+	.	.
scaffold164	subtractBed	intrn	345094	345450	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	345094	345450	506	+	.	.
scaffold164	subtractBed	intrn	346132	346176	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	346132	346176	90	+	.	.
scaffold164	subtractBed	intrn	346235	346276	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	346235	346276	54	+	.	.
scaffold164	subtractBed	intrn	350570	351124	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	350570	351124	652	+	.	.
scaffold164	subtractBed	intrn	352377	352425	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	352377	352425	53	+	.	.
scaffold164	subtractBed	intrn	353610	354241	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	353610	354241	771	+	.	.
scaffold164	subtractBed	intrn	368778	369365	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	368778	369365	915	+	.	.
scaffold164	subtractBed	intrn	368778	369438	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	368778	369438	935	+	.	.
scaffold164	subtractBed	intrn	368778	369444	.	-	.	Parent=CGI_10021867;
	scaffold164	TRF	Tandem_Repeat	368778	369444	929	+	.	.
scaffold164	subtractBed	intrn	462885	463965	.	-	.	Parent=CGI_10021871;
	scaffold164	TRF	Tandem_Repeat	462885	463965	1433	+	.	.
scaffold164	subtractBed	intrn	464869	464954	.	-	.	Parent=CGI_10021871;
	scaffold164	TRF	Tandem_Repeat	464869	464954	93	+	.	.
scaffold164	subtractBed	intrn	467453	467974	.	-	.	Parent=CGI_10021871;
	scaffold164	TRF	Tandem_Repeat	467453	467974	733	+	.	.
scaffold164	subtractBed	intrn	468399	469662	.	-	.	Parent=CGI_10021871;
	scaffold164	TRF	Tandem_Repeat	468399	469662	1679	+	.	.
scaffold164	subtractBed	intrn	482195	482249	.	-	.	Parent=CGI_10021873;
	scaffold164	TRF	Tandem_Repeat	482195	482249	110	+	.	.
scaffold164	subtractBed	intrn	488454	488693	.	-	.	Parent=CGI_10021874;
	scaffold164	TRF	Tandem_Repeat	488454	488693	435	+	.	.
scaffold164	subtractBed	intrn	499758	499796	.	-	.	Parent=CGI_10021874;
	scaffold164	TRF	Tandem_Repeat	499758	499796	78	+	.	.
scaffold164	subtractBed	intrn	499758	499796	.	+	.	Parent=CGI_10021875;
	scaffold164	TRF	Tandem_Repeat	499758	499796	78	+	.	.
scaffold164	subtractBed	intrn	512305	512751	.	-	.	Parent=CGI_10021877;
	scaffold164	TRF	Tandem_Repeat	512305	512751	795	+	.	.
scaffold164	subtractBed	intrn	552437	552652	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	552437	552652	234	+	.	.
scaffold164	subtractBed	intrn	554824	554984	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	554824	554984	187	+	.	.
scaffold164	subtractBed	intrn	557938	558711	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	557938	558711	691	+	.	.
scaffold164	subtractBed	intrn	560609	560812	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	560609	560812	291	+	.	.
scaffold164	subtractBed	intrn	560904	560982	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	560904	560982	122	+	.	.
scaffold164	subtractBed	intrn	563317	563365	.	-	.	Parent=CGI_10021878;
	scaffold164	TRF	Tandem_Repeat	563317	563365	82	+	.	.
scaffold164	subtractBed	intrn	588508	588673	.	-	.	Parent=CGI_10021879;
	scaffold164	TRF	Tandem_Repeat	588508	588673	246	+	.	.
scaffold164	subtractBed	intrn	591153	591183	.	-	.	Parent=CGI_10021879;
	scaffold164	TRF	Tandem_Repeat	591153	591183	53	+	.	.
scaffold164	subtractBed	intrn	679684	680807	.	-	.	Parent=CGI_10021883;
	scaffold164	TRF	Tandem_Repeat	679684	680807	2113	+	.	.
scaffold1641	subtractBed	intrn	11908	11962	.	+	.	Parent=CGI_10012499;
	scaffold1641	TRF	Tandem_Repeat	11908	11962	65	+	.	.
scaffold1641	subtractBed	intrn	11904	11959	.	+	.	Parent=CGI_10012499;
	scaffold1641	TRF	Tandem_Repeat	11904	11959	71	+	.	.
scaffold1641	subtractBed	intrn	70434	70467	.	+	.	Parent=CGI_10012501;
	scaffold1641	TRF	Tandem_Repeat	70434	70467	68	+	.	.
scaffold1641	subtractBed	intrn	72440	72497	.	+	.	Parent=CGI_10012501;
	scaffold1641	TRF	Tandem_Repeat	72440	72497	109	+	.	.
scaffold1641	subtractBed	intrn	65402	65552	.	+	.	Parent=CGI_10012501;
	scaffold1641	TRF	Tandem_Repeat	65402	65552	69	+	.	.
scaffold1641	subtractBed	intrn	73949	75220	.	+	.	Parent=CGI_10012501;
	scaffold1641	TRF	Tandem_Repeat	73949	75220	2142	+	.	.
scaffold1641	subtractBed	intrn	101436	101462	.	-	.	Parent=CGI_10012502;
	scaffold1641	TRF	Tandem_Repeat	101436	101462	54	+	.	.
scaffold1641	subtractBed	intrn	167669	167778	.	+	.	Parent=CGI_10012504;
	scaffold1641	TRF	Tandem_Repeat	167669	167778	202	+	.	.
scaffold1641	subtractBed	intrn	173194	173287	.	-	.	Parent=CGI_10012505;
	scaffold1641	TRF	Tandem_Repeat	173194	173287	136	+	.	.
scaffold1641	subtractBed	intrn	173478	173597	.	-	.	Parent=CGI_10012505;
	scaffold1641	TRF	Tandem_Repeat	173478	173597	134	+	.	.
scaffold1641	subtractBed	intrn	173724	173813	.	-	.	Parent=CGI_10012505;
	scaffold1641	TRF	Tandem_Repeat	173724	173813	90	+	.	.
scaffold1641	subtractBed	intrn	195329	195775	.	+	.	Parent=CGI_10012507;
	scaffold1641	TRF	Tandem_Repeat	195329	195775	355	+	.	.
scaffold1641	subtractBed	intrn	196494	196552	.	+	.	Parent=CGI_10012507;
	scaffold1641	TRF	Tandem_Repeat	196494	196552	118	+	.	.
scaffold1643	subtractBed	intrn	19005	19044	.	-	.	Parent=CGI_10008361;
	scaffold1643	TRF	Tandem_Repeat	19005	19044	80	+	.	.
scaffold1643	subtractBed	intrn	105628	105996	.	+	.	Parent=CGI_10008364;
	scaffold1643	WUBlastX	LTR_Pao	105628	105996	219	+	.	.
scaffold1643	subtractBed	intrn	105040	106002	.	+	.	Parent=CGI_10008364;
	scaffold1643	WUBlastX	LTR_Pao	105040	106002	190	+	.	.
scaffold1643	subtractBed	intrn	105002	105513	.	+	.	Parent=CGI_10008364;
	scaffold1643	WUBlastX	LTR_Pao	104920	105513	35	+	.	.
scaffold1643	subtractBed	intrn	105568	106125	.	+	.	Parent=CGI_10008364;
	scaffold1643	WUBlastX	LTR_Pao	105568	106125	204	+	.	.
scaffold1643	subtractBed	intrn	191847	191913	.	-	.	Parent=CGI_10008368;
	scaffold1643	TRF	Tandem_Repeat	191847	191913	57	+	.	.
scaffold1643	subtractBed	intrn	191850	191891	.	-	.	Parent=CGI_10008368;
	scaffold1643	TRF	Tandem_Repeat	191850	191891	52	+	.	.
scaffold1644	subtractBed	intrn	5145	5384	.	-	.	Parent=CGI_10004211;
	scaffold1644	TRF	Tandem_Repeat	5145	5384	133	+	.	.
scaffold1644	subtractBed	intrn	5281	5386	.	-	.	Parent=CGI_10004211;
	scaffold1644	TRF	Tandem_Repeat	5281	5386	99	+	.	.
scaffold1644	subtractBed	intrn	5371	5404	.	-	.	Parent=CGI_10004211;
	scaffold1644	TRF	Tandem_Repeat	5371	5404	59	+	.	.
scaffold1644	subtractBed	intrn	8162	9010	.	-	.	Parent=CGI_10004211;
	scaffold1644	TRF	Tandem_Repeat	8162	9010	671	+	.	.
scaffold1644	subtractBed	intrn	10061	10100	.	-	.	Parent=CGI_10004211;
	scaffold1644	TRF	Tandem_Repeat	10061	10100	53	+	.	.
scaffold1644	subtractBed	intrn	26735	26764	.	-	.	Parent=CGI_10004213;
	scaffold1644	TRF	Tandem_Repeat	26735	26764	60	+	.	.
scaffold1644	subtractBed	intrn	59661	60764	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	59661	60764	404	-	.	.
scaffold1644	subtractBed	intrn	62363	62599	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	62363	62599	50	-	.	.
scaffold1644	subtractBed	intrn	59593	59634	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	59113	59634	164	-	.	.
scaffold1644	subtractBed	intrn	60830	61432	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	60830	61432	135	-	.	.
scaffold1644	subtractBed	intrn	62122	62364	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	62122	62364	57	-	.	.
scaffold1644	subtractBed	intrn	62342	62539	.	-	.	Parent=CGI_10004214;
	scaffold1644	WUBlastX	DNA_Academ	62342	62539	67	-	.	.
scaffold1644	subtractBed	intrn	65804	65852	.	-	.	Parent=CGI_10004214;
	scaffold1644	TRF	Tandem_Repeat	65804	65852	80	+	.	.
scaffold1646	subtractBed	intrn	61073	61144	.	-	.	Parent=CGI_10007519;
	scaffold1646	TRF	Tandem_Repeat	61073	61144	101	+	.	.
scaffold1647	subtractBed	intrn	159665	159695	.	-	.	Parent=CGI_10008141;
	scaffold1647	TRF	Tandem_Repeat	159665	159695	53	+	.	.
scaffold1647	subtractBed	intrn	161021	161056	.	-	.	Parent=CGI_10008141;
	scaffold1647	TRF	Tandem_Repeat	161021	161056	54	+	.	.
scaffold1647	subtractBed	intrn	161332	161817	.	-	.	Parent=CGI_10008141;
	scaffold1647	WUBlastX	DNA_En-Spm	161332	161817	134	+	.	.
scaffold1647	subtractBed	intrn	159261	159440	.	-	.	Parent=CGI_10008141;
	scaffold1647	WUBlastX	DNA_En-Spm	159261	159440	132	+	.	.
scaffold1647	subtractBed	intrn	159439	159855	.	-	.	Parent=CGI_10008141;
	scaffold1647	WUBlastX	DNA_En-Spm	159439	159855	204	+	.	.
scaffold1647	subtractBed	intrn	190593	190713	.	+	.	Parent=CGI_10008148;
	scaffold1647	TRF	Tandem_Repeat	190593	190713	172	+	.	.
scaffold1647	subtractBed	intrn	188357	188800	.	+	.	Parent=CGI_10008148;
	scaffold1647	WUBlastX	LINE_Penelope	188357	188800	22	-	.	.
scaffold1647	subtractBed	intrn	198300	198336	.	+	.	Parent=CGI_10008148;
	scaffold1647	TRF	Tandem_Repeat	198300	198336	74	+	.	.
scaffold1647	subtractBed	intrn	199044	199100	.	+	.	Parent=CGI_10008148;
	scaffold1647	TRF	Tandem_Repeat	199044	199100	105	+	.	.
scaffold1647	subtractBed	intrn	199143	199276	.	+	.	Parent=CGI_10008148;
	scaffold1647	TRF	Tandem_Repeat	199143	199276	119	+	.	.
scaffold165	subtractBed	intrn	7117	7186	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	7117	7186	113	+	.	.
scaffold165	subtractBed	intrn	11581	12450	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	11581	12450	1264	+	.	.
scaffold165	subtractBed	intrn	13407	13553	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	13407	13553	64	+	.	.
scaffold165	subtractBed	intrn	13478	13598	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	13478	13598	84	+	.	.
scaffold165	subtractBed	intrn	16578	16620	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	16578	16620	68	+	.	.
scaffold165	subtractBed	intrn	15731	16492	.	+	.	Parent=CGI_10015304;
	scaffold165	TRF	Tandem_Repeat	15731	16492	1060	+	.	.
scaffold165	subtractBed	intrn	46011	46364	.	+	.	Parent=CGI_10015311;
	scaffold165	TRF	Tandem_Repeat	46011	46364	487	+	.	.
scaffold165	subtractBed	intrn	46138	46205	.	+	.	Parent=CGI_10015311;
	scaffold165	TRF	Tandem_Repeat	46138	46205	55	+	.	.
scaffold165	subtractBed	intrn	46608	47543	.	+	.	Parent=CGI_10015311;
	scaffold165	TRF	Tandem_Repeat	46608	47869	1051	+	.	.
scaffold165	subtractBed	intrn	46821	46944	.	+	.	Parent=CGI_10015311;
	scaffold165	TRF	Tandem_Repeat	46821	46944	58	+	.	.
scaffold165	subtractBed	intrn	114298	114342	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	114298	114342	20	+	.	.
scaffold165	subtractBed	intrn	110645	110923	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	110645	110923	29	+	.	.
scaffold165	subtractBed	intrn	110693	110923	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	110693	110923	46	+	.	.
scaffold165	subtractBed	intrn	110693	111025	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	110693	111025	44	+	.	.
scaffold165	subtractBed	intrn	111145	112086	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	111145	112086	433	+	.	.
scaffold165	subtractBed	intrn	112520	113827	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	112520	113827	971	+	.	.
scaffold165	subtractBed	intrn	111127	111189	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	111127	111189	22	+	.	.
scaffold165	subtractBed	intrn	112422	112535	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	112422	112535	26	+	.	.
scaffold165	subtractBed	intrn	111139	111867	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	111139	111867	524	+	.	.
scaffold165	subtractBed	intrn	111846	112427	.	+	.	Parent=CGI_10015315;
	scaffold165	WUBlastX	LTR_Gypsy	111846	112427	359	+	.	.
scaffold165	subtractBed	intrn	119247	119553	.	+	.	Parent=CGI_10015315;
	scaffold165	TRF	Tandem_Repeat	119247	119553	614	+	.	.
scaffold165	subtractBed	intrn	141731	142185	.	+	.	Parent=CGI_10015318;
	scaffold165	TRF	Tandem_Repeat	141731	142185	645	+	.	.
scaffold165	subtractBed	intrn	147562	148859	.	-	.	Parent=CGI_10015320;
	scaffold165	TRF	Tandem_Repeat	147562	148859	1650	+	.	.
scaffold165	subtractBed	intrn	198520	198783	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	198520	198783	47	-	.	.
scaffold165	subtractBed	intrn	198406	198786	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	198406	198786	27	-	.	.
scaffold165	subtractBed	intrn	197614	198042	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	197614	198042	153	-	.	.
scaffold165	subtractBed	intrn	198867	198983	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	198867	198983	28	-	.	.
scaffold165	subtractBed	intrn	197644	198333	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	197644	198333	30	-	.	.
scaffold165	subtractBed	intrn	199350	199451	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	199350	199451	36	-	.	.
scaffold165	subtractBed	intrn	197644	198198	.	+	.	Parent=CGI_10015323;
	scaffold165	WUBlastX	LTR_Pao	197644	198198	126	-	.	.
scaffold165	subtractBed	intrn	210277	210535	.	+	.	Parent=CGI_10015324;
	scaffold165	TRF	Tandem_Repeat	210277	210535	164	+	.	.
scaffold165	subtractBed	intrn	210352	210556	.	+	.	Parent=CGI_10015324;
	scaffold165	TRF	Tandem_Repeat	210352	210556	267	+	.	.
scaffold165	subtractBed	intrn	227589	228308	.	+	.	Parent=CGI_10015326;
	scaffold165	TRF	Tandem_Repeat	227589	228308	1359	+	.	.
scaffold165	subtractBed	intrn	241435	241858	.	-	.	Parent=CGI_10015327;
	scaffold165	TRF	Tandem_Repeat	241435	241858	699	+	.	.
scaffold165	subtractBed	intrn	246226	246318	.	-	.	Parent=CGI_10015327;
	scaffold165	TRF	Tandem_Repeat	246226	246318	186	+	.	.
scaffold165	subtractBed	intrn	305122	305772	.	-	.	Parent=CGI_10015330;
	scaffold165	WUBlastX	LINE_L1	305122	305772	42	-	.	.
scaffold165	subtractBed	intrn	306997	307641	.	-	.	Parent=CGI_10015330;
	scaffold165	WUBlastX	DNA_En-Spm	306997	307641	199	-	.	.
scaffold165	subtractBed	intrn	306877	307470	.	-	.	Parent=CGI_10015330;
	scaffold165	WUBlastX	DNA_En-Spm	306877	307470	36	-	.	.
scaffold165	subtractBed	intrn	305281	306822	.	-	.	Parent=CGI_10015330;
	scaffold165	WUBlastX	LINE_L1-Tx1	305281	306822	539	-	.	.
scaffold165	subtractBed	intrn	375009	376244	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	374986	376244	1538	+	.	.
scaffold165	subtractBed	intrn	375292	376244	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	375292	376244	1190	+	.	.
scaffold165	subtractBed	intrn	382159	383555	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	382159	383555	1873	+	.	.
scaffold165	subtractBed	intrn	382159	383562	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	382159	383562	1874	+	.	.
scaffold165	subtractBed	intrn	380877	380990	.	-	.	Parent=CGI_10015331;
	scaffold165	WUBlastX	LINE_L1-Tx1	380877	380990	36	-	.	.
scaffold165	subtractBed	intrn	380959	381249	.	-	.	Parent=CGI_10015331;
	scaffold165	WUBlastX	LINE_L1-Tx1	380959	381249	54	-	.	.
scaffold165	subtractBed	intrn	384747	384794	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	384747	384794	78	+	.	.
scaffold165	subtractBed	intrn	385147	385185	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	385147	385185	78	+	.	.
scaffold165	subtractBed	intrn	385549	385661	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	385549	385661	92	+	.	.
scaffold165	subtractBed	intrn	385814	386201	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	385814	386201	571	+	.	.
scaffold165	subtractBed	intrn	386206	386491	.	-	.	Parent=CGI_10015331;
	scaffold165	TRF	Tandem_Repeat	386206	386555	522	+	.	.
scaffold165	subtractBed	intrn	402226	402485	.	+	.	Parent=CGI_10015333;
	scaffold165	TRF	Tandem_Repeat	402226	402492	171	+	.	.
scaffold165	subtractBed	intrn	405872	406258	.	+	.	Parent=CGI_10015333;
	scaffold165	TRF	Tandem_Repeat	405872	406258	701	+	.	.
scaffold165	subtractBed	intrn	416884	417128	.	-	.	Parent=CGI_10015334;
	scaffold165	TRF	Tandem_Repeat	416884	417128	185	+	.	.
scaffold165	subtractBed	intrn	416884	417079	.	-	.	Parent=CGI_10015334;
	scaffold165	TRF	Tandem_Repeat	416884	417079	218	+	.	.
scaffold165	subtractBed	intrn	417561	417825	.	-	.	Parent=CGI_10015334;
	scaffold165	TRF	Tandem_Repeat	417561	417825	130	+	.	.
scaffold165	subtractBed	intrn	417557	417825	.	-	.	Parent=CGI_10015334;
	scaffold165	TRF	Tandem_Repeat	417557	417825	254	+	.	.
scaffold1650	subtractBed	intrn	13029	13421	.	-	.	Parent=CGI_10017768;
	scaffold1650	WUBlastX	LTR_DIRS	13029	13421	112	-	.	.
scaffold1650	subtractBed	intrn	13432	13650	.	-	.	Parent=CGI_10017768;
	scaffold1650	WUBlastX	LTR_DIRS	13432	13650	56	-	.	.
scaffold1650	subtractBed	intrn	113960	114583	.	-	.	Parent=CGI_10017772;
	scaffold1650	WUBlastX	LINE_CR1	113960	114583	41	-	.	.
scaffold1650	subtractBed	intrn	113636	114451	.	-	.	Parent=CGI_10017772;
	scaffold1650	WUBlastX	LINE_L2	113636	114451	280	-	.	.
scaffold1650	subtractBed	intrn	138190	139276	.	+	.	Parent=CGI_10017773;
	scaffold1650	TRF	Tandem_Repeat	138190	139276	1514	+	.	.
scaffold1650	subtractBed	intrn	149563	149604	.	+	.	Parent=CGI_10017773;
	scaffold1650	TRF	Tandem_Repeat	149563	149604	84	+	.	.
scaffold1650	subtractBed	intrn	174837	174885	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	174837	174885	98	+	.	.
scaffold1650	subtractBed	intrn	178423	178849	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	178423	178849	600	+	.	.
scaffold1650	subtractBed	intrn	182783	183316	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	182783	183316	795	+	.	.
scaffold1650	subtractBed	intrn	182766	183316	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	182766	183316	737	+	.	.
scaffold1650	subtractBed	intrn	188118	188219	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	188118	188219	152	+	.	.
scaffold1650	subtractBed	intrn	189676	190325	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	189676	190325	724	+	.	.
scaffold1650	subtractBed	intrn	190979	191211	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	190979	191211	131	+	.	.
scaffold1650	subtractBed	intrn	192885	193954	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	192885	193954	1782	+	.	.
scaffold1650	subtractBed	intrn	196277	196377	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	196277	196377	62	+	.	.
scaffold1650	subtractBed	intrn	201139	201181	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	201139	201181	86	+	.	.
scaffold1650	subtractBed	intrn	203261	203362	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	203261	203362	50	+	.	.
scaffold1650	subtractBed	intrn	203279	203345	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	203279	203345	62	+	.	.
scaffold1650	subtractBed	intrn	203497	203581	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	203497	203581	161	+	.	.
scaffold1650	subtractBed	intrn	206109	206402	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	206109	206402	253	+	.	.
scaffold1650	subtractBed	intrn	208660	208702	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	208660	208702	68	+	.	.
scaffold1650	subtractBed	intrn	208656	208703	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	208656	208703	51	+	.	.
scaffold1650	subtractBed	intrn	208653	208703	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	208653	208703	66	+	.	.
scaffold1650	subtractBed	intrn	211119	211322	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	211119	211322	320	+	.	.
scaffold1650	subtractBed	intrn	213264	213337	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	213264	213337	130	+	.	.
scaffold1650	subtractBed	intrn	214709	215148	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	214709	215148	767	+	.	.
scaffold1650	subtractBed	intrn	214637	215148	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	214637	215148	764	+	.	.
scaffold1650	subtractBed	intrn	216159	216298	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	216159	216298	253	+	.	.
scaffold1650	subtractBed	intrn	225565	225681	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	225565	225681	126	+	.	.
scaffold1650	subtractBed	intrn	230108	230179	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	230108	230179	108	+	.	.
scaffold1650	subtractBed	intrn	231522	231554	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	231522	231554	57	+	.	.
scaffold1650	subtractBed	intrn	231522	231584	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	231522	231584	63	+	.	.
scaffold1650	subtractBed	intrn	231660	231753	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	231660	231753	84	+	.	.
scaffold1650	subtractBed	intrn	231646	231753	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	231646	231753	78	+	.	.
scaffold1650	subtractBed	intrn	231809	231877	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	231809	231877	106	+	.	.
scaffold1650	subtractBed	intrn	232466	233156	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	232466	233156	1120	+	.	.
scaffold1650	subtractBed	intrn	234547	234620	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	234547	234620	148	+	.	.
scaffold1650	subtractBed	intrn	236159	236254	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	236159	236254	183	+	.	.
scaffold1650	subtractBed	intrn	237662	239037	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	237662	239037	2294	+	.	.
scaffold1650	subtractBed	intrn	239144	239461	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	239144	239461	618	+	.	.
scaffold1650	subtractBed	intrn	243616	243743	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	243616	243743	211	+	.	.
scaffold1650	subtractBed	intrn	244220	244307	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	244220	244307	108	+	.	.
scaffold1650	subtractBed	intrn	249698	250100	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	249698	250100	422	+	.	.
scaffold1650	subtractBed	intrn	250342	250688	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	250342	250688	505	+	.	.
scaffold1650	subtractBed	intrn	250727	250810	.	-	.	Parent=CGI_10017775;
	scaffold1650	TRF	Tandem_Repeat	250727	250810	51	+	.	.
scaffold1650	subtractBed	intrn	272940	273038	.	-	.	Parent=CGI_10017776;
	scaffold1650	TRF	Tandem_Repeat	272940	273038	162	+	.	.
scaffold1650	subtractBed	intrn	273169	273206	.	-	.	Parent=CGI_10017776;
	scaffold1650	TRF	Tandem_Repeat	273169	273206	76	+	.	.
scaffold1650	subtractBed	intrn	276887	277045	.	-	.	Parent=CGI_10017776;
	scaffold1650	TRF	Tandem_Repeat	276887	277045	264	+	.	.
scaffold1650	subtractBed	intrn	350458	351332	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	350457	351332	372	+	.	.
scaffold1650	subtractBed	intrn	350676	351388	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	350676	351388	733	+	.	.
scaffold1650	subtractBed	intrn	350868	351388	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	350868	351388	634	+	.	.
scaffold1650	subtractBed	intrn	350676	351388	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	350676	351388	772	+	.	.
scaffold1650	subtractBed	intrn	351541	351689	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	351541	351689	94	+	.	.
scaffold1650	subtractBed	intrn	353879	353982	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353879	353982	136	+	.	.
scaffold1650	subtractBed	intrn	353879	353982	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353879	353982	136	+	.	.
scaffold1650	subtractBed	intrn	353882	354012	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353882	354012	108	+	.	.
scaffold1650	subtractBed	intrn	353879	354016	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353879	354016	145	+	.	.
scaffold1650	subtractBed	intrn	353880	354012	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353880	354012	144	+	.	.
scaffold1650	subtractBed	intrn	353928	354016	.	+	.	Parent=CGI_10017778;
	scaffold1650	TRF	Tandem_Repeat	353928	354016	73	+	.	.
scaffold1650	subtractBed	intrn	379164	379226	.	+	.	Parent=CGI_10017779;
	scaffold1650	TRF	Tandem_Repeat	379164	379226	110	+	.	.
scaffold1650	subtractBed	intrn	379775	379863	.	+	.	Parent=CGI_10017779;
	scaffold1650	TRF	Tandem_Repeat	379775	379863	108	+	.	.
scaffold1650	subtractBed	intrn	384600	384633	.	-	.	Parent=CGI_10017780;
	scaffold1650	TRF	Tandem_Repeat	384600	384633	59	+	.	.
scaffold1650	subtractBed	intrn	460811	461488	.	+	.	Parent=CGI_10017782;
	scaffold1650	WUBlastX	DNA_TcMar-Marin	460811	461488	140	+	.	.
scaffold1650	subtractBed	intrn	460637	461485	.	+	.	Parent=CGI_10017782;
	scaffold1650	WUBlastX	DNA_TcMar-Marin	460637	461485	30	+	.	.
scaffold1651	subtractBed	intrn	2748	2797	.	-	.	Parent=CGI_10007883;
	scaffold1651	TRF	Tandem_Repeat	2748	2797	84	+	.	.
scaffold1651	subtractBed	intrn	2940	2983	.	-	.	Parent=CGI_10007883;
	scaffold1651	TRF	Tandem_Repeat	2940	2983	88	+	.	.
scaffold1651	subtractBed	intrn	4076	5133	.	-	.	Parent=CGI_10007883;
	scaffold1651	TRF	Tandem_Repeat	4076	5133	1153	+	.	.
scaffold1651	subtractBed	intrn	53554	53636	.	+	.	Parent=CGI_10007887;
	scaffold1651	TRF	Tandem_Repeat	53554	53636	66	+	.	.
scaffold1651	subtractBed	intrn	53536	53635	.	+	.	Parent=CGI_10007887;
	scaffold1651	TRF	Tandem_Repeat	53536	53635	67	+	.	.
scaffold1651	subtractBed	intrn	53557	53607	.	+	.	Parent=CGI_10007887;
	scaffold1651	TRF	Tandem_Repeat	53557	53607	66	+	.	.
scaffold1651	subtractBed	intrn	65256	65534	.	+	.	Parent=CGI_10007888;
	scaffold1651	WUBlastX	DNA_TcMar-Tc1	65256	65534	79	-	.	.
scaffold1651	subtractBed	intrn	66802	66867	.	+	.	Parent=CGI_10007888;
	scaffold1651	WUBlastX	DNA_TcMar-Tc1	66802	66867	22	-	.	.
scaffold1651	subtractBed	intrn	67261	67590	.	+	.	Parent=CGI_10007888;
	scaffold1651	WUBlastX	DNA_TcMar-Tc1	67261	67590	91	-	.	.
scaffold1651	subtractBed	intrn	78770	79376	.	+	.	Parent=CGI_10007890;
	scaffold1651	TRF	Tandem_Repeat	78770	79376	1061	+	.	.
scaffold1651	subtractBed	intrn	88813	89289	.	-	.	Parent=CGI_10007891;
	scaffold1651	TRF	Tandem_Repeat	88813	89289	526	+	.	.
scaffold1651	subtractBed	intrn	103502	103594	.	-	.	Parent=CGI_10007892;
	scaffold1651	TRF	Tandem_Repeat	103502	103594	73	+	.	.
scaffold1652	subtractBed	intrn	6960	7236	.	+	.	Parent=CGI_10012376;
	scaffold1652	TRF	Tandem_Repeat	6960	7236	319	+	.	.
scaffold1652	subtractBed	intrn	39528	39570	.	+	.	Parent=CGI_10012378;
	scaffold1652	TRF	Tandem_Repeat	39528	39570	68	+	.	.
scaffold1652	subtractBed	intrn	48606	48638	.	+	.	Parent=CGI_10012378;
	scaffold1652	TRF	Tandem_Repeat	48606	48638	66	+	.	.
scaffold1652	subtractBed	intrn	50485	50540	.	+	.	Parent=CGI_10012378;
	scaffold1652	TRF	Tandem_Repeat	50485	50540	67	+	.	.
scaffold1652	subtractBed	intrn	61957	62096	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	61957	62096	145	+	.	.
scaffold1652	subtractBed	intrn	61939	62099	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	61939	62099	119	+	.	.
scaffold1652	subtractBed	intrn	61919	62096	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	61919	62096	162	+	.	.
scaffold1652	subtractBed	intrn	62680	62736	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	62680	62736	114	+	.	.
scaffold1652	subtractBed	intrn	62784	62820	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	62784	62820	65	+	.	.
scaffold1652	subtractBed	intrn	67735	67950	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	67735	67950	143	+	.	.
scaffold1652	subtractBed	intrn	72081	72205	.	-	.	Parent=CGI_10012379;
	scaffold1652	TRF	Tandem_Repeat	72081	72205	142	+	.	.
scaffold1652	subtractBed	intrn	74683	74723	.	-	.	Parent=CGI_10012380;
	scaffold1652	TRF	Tandem_Repeat	74683	74723	82	+	.	.
scaffold1652	subtractBed	intrn	102039	102074	.	-	.	Parent=CGI_10012382;
	scaffold1652	TRF	Tandem_Repeat	102039	102074	72	+	.	.
scaffold1652	subtractBed	intrn	115322	115979	.	+	.	Parent=CGI_10012384;
	scaffold1652	TRF	Tandem_Repeat	115322	115979	1032	+	.	.
scaffold1652	subtractBed	intrn	122964	123030	.	+	.	Parent=CGI_10012385;
	scaffold1652	TRF	Tandem_Repeat	122964	123030	79	+	.	.
scaffold1652	subtractBed	intrn	128798	128864	.	+	.	Parent=CGI_10012385;
	scaffold1652	TRF	Tandem_Repeat	128798	128864	125	+	.	.
scaffold1652	subtractBed	intrn	138227	138251	.	+	.	Parent=CGI_10012387;
	scaffold1652	TRF	Tandem_Repeat	138227	138251	50	+	.	.
scaffold1652	subtractBed	intrn	151901	151934	.	-	.	Parent=CGI_10012388;
	scaffold1652	TRF	Tandem_Repeat	151901	151934	52	+	.	.
scaffold1652	subtractBed	intrn	153240	154366	.	-	.	Parent=CGI_10012388;
	scaffold1652	TRF	Tandem_Repeat	153240	154366	1672	+	.	.
scaffold1652	subtractBed	intrn	154390	154439	.	-	.	Parent=CGI_10012388;
	scaffold1652	TRF	Tandem_Repeat	154390	154439	55	+	.	.
scaffold1652	subtractBed	intrn	154393	154448	.	-	.	Parent=CGI_10012388;
	scaffold1652	TRF	Tandem_Repeat	154393	154448	67	+	.	.
scaffold1652	subtractBed	intrn	154390	154447	.	-	.	Parent=CGI_10012388;
	scaffold1652	TRF	Tandem_Repeat	154390	154447	62	+	.	.
scaffold1652	subtractBed	intrn	172642	173029	.	-	.	Parent=CGI_10012389;
	scaffold1652	TRF	Tandem_Repeat	172642	173032	610	+	.	.
scaffold1652	subtractBed	intrn	172642	173029	.	-	.	Parent=CGI_10012389;
	scaffold1652	TRF	Tandem_Repeat	172642	173032	610	+	.	.
scaffold1652	subtractBed	intrn	173580	173689	.	-	.	Parent=CGI_10012389;
	scaffold1652	TRF	Tandem_Repeat	173580	173689	193	+	.	.
scaffold1652	subtractBed	intrn	183248	183282	.	+	.	Parent=CGI_10012390;
	scaffold1652	TRF	Tandem_Repeat	183248	183282	70	+	.	.
scaffold1652	subtractBed	intrn	186884	187833	.	+	.	Parent=CGI_10012390;
	scaffold1652	TRF	Tandem_Repeat	186884	187833	1115	+	.	.
scaffold1652	subtractBed	intrn	192364	192524	.	-	.	Parent=CGI_10012391;
	scaffold1652	TRF	Tandem_Repeat	192364	192524	61	+	.	.
scaffold1652	subtractBed	intrn	193527	194293	.	-	.	Parent=CGI_10012391;
	scaffold1652	TRF	Tandem_Repeat	193527	194293	967	+	.	.
scaffold1652	subtractBed	intrn	224905	224907	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	224905	225096	45	-	.	.
scaffold1652	subtractBed	intrn	226018	227061	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	226018	227061	137	-	.	.
scaffold1652	subtractBed	intrn	234415	234570	.	-	.	Parent=CGI_10012393;
	scaffold1652	TRF	Tandem_Repeat	234415	234570	100	+	.	.
scaffold1652	subtractBed	intrn	234440	234560	.	-	.	Parent=CGI_10012393;
	scaffold1652	TRF	Tandem_Repeat	234440	234560	66	+	.	.
scaffold1652	subtractBed	intrn	230605	231291	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	230605	231291	381	-	.	.
scaffold1652	subtractBed	intrn	230380	231489	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	230380	231489	87	-	.	.
scaffold1652	subtractBed	intrn	231487	232071	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	231487	232071	56	-	.	.
scaffold1652	subtractBed	intrn	226231	231123	.	-	.	Parent=CGI_10012393;
	scaffold1652	WUBlastX	RC_Helitron	226231	231123	2518	-	.	.
scaffold1652	subtractBed	intrn	239948	240029	.	-	.	Parent=CGI_10012393;
	scaffold1652	TRF	Tandem_Repeat	239948	240029	78	+	.	.
scaffold1652	subtractBed	intrn	239959	240029	.	-	.	Parent=CGI_10012393;
	scaffold1652	TRF	Tandem_Repeat	239959	240029	88	+	.	.
scaffold1652	subtractBed	intrn	240070	240144	.	-	.	Parent=CGI_10012393;
	scaffold1652	TRF	Tandem_Repeat	240070	240144	143	+	.	.
scaffold1652	subtractBed	intrn	254238	254552	.	+	.	Parent=CGI_10012394;
	scaffold1652	TRF	Tandem_Repeat	254238	254552	576	+	.	.
scaffold1652	subtractBed	intrn	278911	279012	.	-	.	Parent=CGI_10012395;
	scaffold1652	TRF	Tandem_Repeat	278911	279012	95	+	.	.
scaffold1653	subtractBed	intrn	13490	13535	.	-	.	Parent=CGI_10002251;
	scaffold1653	TRF	Tandem_Repeat	13490	13535	56	+	.	.
scaffold1653	subtractBed	intrn	29962	30106	.	-	.	Parent=CGI_10002252;
	scaffold1653	WUBlastX	DNA_TcMar-Ant1	29741	30106	89	-	.	.
scaffold1654	subtractBed	intrn	32713	32767	.	+	.	Parent=CGI_10004123;
	scaffold1654	TRF	Tandem_Repeat	32713	32767	56	+	.	.
scaffold1654	subtractBed	intrn	36889	37563	.	-	.	Parent=CGI_10004124;
	scaffold1654	TRF	Tandem_Repeat	36889	37563	589	+	.	.
scaffold1654	subtractBed	intrn	36834	37563	.	-	.	Parent=CGI_10004124;
	scaffold1654	TRF	Tandem_Repeat	36834	37563	643	+	.	.
scaffold1654	subtractBed	intrn	82586	82687	.	+	.	Parent=CGI_10004125;
	scaffold1654	TRF	Tandem_Repeat	82586	82687	100	+	.	.
scaffold1654	subtractBed	intrn	85687	85711	.	+	.	Parent=CGI_10004125;
	scaffold1654	TRF	Tandem_Repeat	85687	85711	50	+	.	.
scaffold1656	subtractBed	intrn	60834	60875	.	-	.	Parent=CGI_10006142;
	scaffold1656	TRF	Tandem_Repeat	60834	60875	59	+	.	.
scaffold1656	subtractBed	intrn	62642	62836	.	-	.	Parent=CGI_10006142;
	scaffold1656	WUBlastX	LTR_DIRS	62642	62836	47	+	.	.
scaffold1656	subtractBed	intrn	62997	63104	.	-	.	Parent=CGI_10006142;
	scaffold1656	WUBlastX	LTR_DIRS	62997	63104	41	+	.	.
scaffold1656	subtractBed	intrn	73541	73778	.	-	.	Parent=CGI_10006142;
	scaffold1656	WUBlastX	LINE_RTE-BovB	73541	73825	75	+	.	.
scaffold1656	subtractBed	intrn	76323	76371	.	+	.	Parent=CGI_10006143;
	scaffold1656	TRF	Tandem_Repeat	76323	76371	98	+	.	.
scaffold1656	subtractBed	intrn	74783	76264	.	+	.	Parent=CGI_10006143;
	scaffold1656	WUBlastX	LTR_Gypsy-Troyk	74783	76264	75	+	.	.
scaffold1656	subtractBed	intrn	74818	75384	.	+	.	Parent=CGI_10006143;
	scaffold1656	WUBlastX	LTR_Gypsy-Troyk	74818	75384	117	+	.	.
scaffold1656	subtractBed	intrn	75390	75638	.	+	.	Parent=CGI_10006143;
	scaffold1656	WUBlastX	LTR_Gypsy-Troyk	75390	75638	87	+	.	.
scaffold1656	subtractBed	intrn	124340	124383	.	-	.	Parent=CGI_10006145;
	scaffold1656	TRF	Tandem_Repeat	124340	124383	88	+	.	.
scaffold1656	subtractBed	intrn	125026	125054	.	-	.	Parent=CGI_10006145;
	scaffold1656	TRF	Tandem_Repeat	125026	125054	58	+	.	.
scaffold1656	subtractBed	intrn	122252	122476	.	-	.	Parent=CGI_10006145;
	scaffold1656	WUBlastX	LTR_Ngaro	122252	122476	58	-	.	.
scaffold1656	subtractBed	intrn	122733	122861	.	-	.	Parent=CGI_10006145;
	scaffold1656	WUBlastX	LTR_Ngaro	122733	122861	78	-	.	.
scaffold1656	subtractBed	intrn	122733	122897	.	-	.	Parent=CGI_10006145;
	scaffold1656	WUBlastX	LTR_Ngaro	122733	122897	72	-	.	.
scaffold1656	subtractBed	intrn	122947	123090	.	-	.	Parent=CGI_10006145;
	scaffold1656	WUBlastX	LTR_Ngaro	122947	123090	28	-	.	.
scaffold1656	subtractBed	intrn	122631	122903	.	-	.	Parent=CGI_10006145;
	scaffold1656	WUBlastX	LTR_Ngaro	122631	122903	50	-	.	.
scaffold1659	subtractBed	intrn	5103	5157	.	+	.	Parent=CGI_10001326;
	scaffold1659	TRF	Tandem_Repeat	5103	5157	101	+	.	.
scaffold1659	subtractBed	intrn	6299	6351	.	+	.	Parent=CGI_10001326;
	scaffold1659	TRF	Tandem_Repeat	6299	6351	97	+	.	.
scaffold1659	subtractBed	intrn	6608	6754	.	+	.	Parent=CGI_10001326;
	scaffold1659	WUBlastX	DNA_Harbinger	6608	6754	24	+	.	.
scaffold1659	subtractBed	intrn	6877	7077	.	+	.	Parent=CGI_10001326;
	scaffold1659	WUBlastX	DNA_Harbinger	6877	7077	90	+	.	.
scaffold1659	subtractBed	intrn	6904	7071	.	+	.	Parent=CGI_10001326;
	scaffold1659	WUBlastX	DNA_Harbinger	6904	7071	103	+	.	.
scaffold1659	subtractBed	intrn	13810	13876	.	+	.	Parent=CGI_10001326;
	scaffold1659	TRF	Tandem_Repeat	13810	13876	80	+	.	.
scaffold1659	subtractBed	intrn	16213	16249	.	+	.	Parent=CGI_10001326;
	scaffold1659	TRF	Tandem_Repeat	16213	16249	74	+	.	.
scaffold1663	subtractBed	intrn	5170	5257	.	+	.	Parent=CGI_10009862;
	scaffold1663	TRF	Tandem_Repeat	5170	5257	140	+	.	.
scaffold1663	subtractBed	intrn	8509	8980	.	+	.	Parent=CGI_10009862;
	scaffold1663	TRF	Tandem_Repeat	8509	8980	521	+	.	.
scaffold1663	subtractBed	intrn	3508	4392	.	+	.	Parent=CGI_10009862;
	scaffold1663	WUBlastX	LINE_L1-Tx1	3508	4392	23	+	.	.
scaffold1663	subtractBed	intrn	3811	4365	.	+	.	Parent=CGI_10009862;
	scaffold1663	WUBlastX	LINE_L1-Tx1	3811	4365	100	+	.	.
scaffold1663	subtractBed	intrn	16670	17007	.	-	.	Parent=CGI_10009863;
	scaffold1663	TRF	Tandem_Repeat	16670	17007	478	+	.	.
scaffold1663	subtractBed	intrn	17689	18027	.	-	.	Parent=CGI_10009863;
	scaffold1663	WUBlastX	LINE_RTE-X	17689	18027	32	+	.	.
scaffold1663	subtractBed	intrn	18006	18299	.	-	.	Parent=CGI_10009863;
	scaffold1663	WUBlastX	LINE_RTE-X	18006	18299	74	+	.	.
scaffold1663	subtractBed	intrn	17800	18027	.	-	.	Parent=CGI_10009863;
	scaffold1663	WUBlastX	LINE_RTE-X	17800	18027	52	+	.	.
scaffold1663	subtractBed	intrn	24581	24623	.	-	.	Parent=CGI_10009863;
	scaffold1663	TRF	Tandem_Repeat	24581	24623	50	+	.	.
scaffold1663	subtractBed	intrn	71708	71754	.	-	.	Parent=CGI_10009864;
	scaffold1663	TRF	Tandem_Repeat	71708	71754	85	+	.	.
scaffold1663	subtractBed	intrn	92283	92359	.	-	.	Parent=CGI_10009864;
	scaffold1663	TRF	Tandem_Repeat	92283	92359	154	+	.	.
scaffold1663	subtractBed	intrn	95862	95897	.	-	.	Parent=CGI_10009864;
	scaffold1663	TRF	Tandem_Repeat	95862	95897	63	+	.	.
scaffold1663	subtractBed	intrn	108033	108587	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	DNA_MuDR	108033	108587	62	-	.	.
scaffold1663	subtractBed	intrn	109743	109859	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	LINE_CR1	109743	109859	35	+	.	.
scaffold1663	subtractBed	intrn	109788	109877	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	LINE_CR1	109788	109877	27	+	.	.
scaffold1663	subtractBed	intrn	106829	108034	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	DNA_MuDR	106829	108034	377	-	.	.
scaffold1663	subtractBed	intrn	108075	108521	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	DNA_MuDR	108075	108521	178	-	.	.
scaffold1663	subtractBed	intrn	108473	108913	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	DNA_MuDR	108473	108913	29	-	.	.
scaffold1663	subtractBed	intrn	109695	109859	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	LINE_CR1	109695	109859	21	+	.	.
scaffold1663	subtractBed	intrn	109874	110905	.	-	.	Parent=CGI_10009864;
	scaffold1663	WUBlastX	LINE_L2	109874	110905	139	+	.	.
scaffold1663	subtractBed	intrn	115427	115637	.	-	.	Parent=CGI_10009864;
	scaffold1663	TRF	Tandem_Repeat	115427	115637	169	+	.	.
scaffold1663	subtractBed	intrn	203304	203341	.	+	.	Parent=CGI_10009866;
	scaffold1663	TRF	Tandem_Repeat	203304	203341	67	+	.	.
scaffold1663	subtractBed	intrn	203465	203489	.	+	.	Parent=CGI_10009866;
	scaffold1663	TRF	Tandem_Repeat	203465	203489	50	+	.	.
scaffold1663	subtractBed	intrn	210833	210872	.	+	.	Parent=CGI_10009867;
	scaffold1663	TRF	Tandem_Repeat	210833	210872	71	+	.	.
scaffold1663	subtractBed	intrn	220374	220453	.	+	.	Parent=CGI_10009867;
	scaffold1663	TRF	Tandem_Repeat	220374	220453	99	+	.	.
scaffold1665	subtractBed	intrn	39865	39889	.	+	.	Parent=CGI_10015197;
	scaffold1665	TRF	Tandem_Repeat	39865	39889	50	+	.	.
scaffold1665	subtractBed	intrn	76195	76247	.	-	.	Parent=CGI_10015198;
	scaffold1665	TRF	Tandem_Repeat	76195	76247	106	+	.	.
scaffold1665	subtractBed	intrn	99229	99713	.	-	.	Parent=CGI_10015199;
	scaffold1665	TRF	Tandem_Repeat	99229	99713	252	+	.	.
scaffold1665	subtractBed	intrn	101095	101139	.	-	.	Parent=CGI_10015199;
	scaffold1665	TRF	Tandem_Repeat	101095	101139	90	+	.	.
scaffold1665	subtractBed	intrn	134062	134331	.	-	.	Parent=CGI_10015200;
	scaffold1665	WUBlastX	LINE_RTE-X	134062	134331	114	+	.	.
scaffold1665	subtractBed	intrn	134131	134367	.	-	.	Parent=CGI_10015200;
	scaffold1665	WUBlastX	LINE_RTE-X	134131	134367	69	+	.	.
scaffold1665	subtractBed	intrn	189936	190107	.	-	.	Parent=CGI_10015205;
	scaffold1665	TRF	Tandem_Repeat	189936	190107	192	+	.	.
scaffold1665	subtractBed	intrn	189987	190311	.	-	.	Parent=CGI_10015205;
	scaffold1665	TRF	Tandem_Repeat	189987	190311	272	+	.	.
scaffold1665	subtractBed	intrn	222559	224274	.	-	.	Parent=CGI_10015206;
	scaffold1665	WUBlastX	LTR_Gypsy	222559	224274	558	+	.	.
scaffold1665	subtractBed	intrn	222388	222915	.	-	.	Parent=CGI_10015206;
	scaffold1665	WUBlastX	LTR_Gypsy	222388	222915	183	+	.	.
scaffold1665	subtractBed	intrn	316133	316191	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	316133	316191	118	+	.	.
scaffold1665	subtractBed	intrn	317216	317259	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	317216	317259	88	+	.	.
scaffold1665	subtractBed	intrn	339851	339908	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	339851	339908	116	+	.	.
scaffold1665	subtractBed	intrn	340260	340285	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	340260	340285	52	+	.	.
scaffold1665	subtractBed	intrn	341495	341563	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	341495	341563	95	+	.	.
scaffold1665	subtractBed	intrn	345587	345642	.	+	.	Parent=CGI_10015211;
	scaffold1665	TRF	Tandem_Repeat	345587	345642	112	+	.	.
scaffold1665	subtractBed	intrn	415513	415872	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_RTE-X	415513	415872	123	+	.	.
scaffold1665	subtractBed	intrn	415411	415866	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_CR1-L2	415411	415866	62	+	.	.
scaffold1665	subtractBed	intrn	416347	416649	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_RTE-X	416347	416649	145	+	.	.
scaffold1665	subtractBed	intrn	415713	416366	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_RTE-X	415713	416366	210	+	.	.
scaffold1665	subtractBed	intrn	415348	415659	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_I	415348	415659	32	+	.	.
scaffold1665	subtractBed	intrn	416599	416772	.	-	.	Parent=CGI_10015218;
	scaffold1665	WUBlastX	LINE_RTE-X	416599	416772	59	+	.	.
scaffold1669	subtractBed	intrn	9502	9792	.	-	.	Parent=CGI_10001412;
	scaffold1669	WUBlastX	DNA_Kolobok	9502	9792	111	+	.	.
scaffold1669	subtractBed	intrn	9876	9923	.	-	.	Parent=CGI_10001412;
	scaffold1669	WUBlastX	DNA_Kolobok	9876	9923	40	+	.	.
scaffold1670	subtractBed	intrn	31530	31573	.	+	.	Parent=CGI_10017595;
	scaffold1670	TRF	Tandem_Repeat	31530	31573	88	+	.	.
scaffold1670	subtractBed	intrn	35276	35425	.	+	.	Parent=CGI_10017595;
	scaffold1670	WUBlastX	LINE_R2-Hero	35276	35425	22	-	.	.
scaffold1670	subtractBed	intrn	35467	35808	.	+	.	Parent=CGI_10017595;
	scaffold1670	WUBlastX	LINE_R2-Hero	35467	35808	135	-	.	.
scaffold1670	subtractBed	intrn	36071	36199	.	+	.	Parent=CGI_10017595;
	scaffold1670	WUBlastX	LINE_R2-Hero	36071	36199	34	-	.	.
scaffold1670	subtractBed	intrn	39543	39599	.	+	.	Parent=CGI_10017595;
	scaffold1670	TRF	Tandem_Repeat	39543	39599	98	+	.	.
scaffold1670	subtractBed	intrn	44050	44184	.	+	.	Parent=CGI_10017595;
	scaffold1670	WUBlastX	DNA_TcMar-Marin	44050	44184	46	-	.	.
scaffold1670	subtractBed	intrn	71098	71971	.	-	.	Parent=CGI_10017597;
	scaffold1670	TRF	Tandem_Repeat	71098	71971	1429	+	.	.
scaffold1670	subtractBed	intrn	138913	139087	.	+	.	Parent=CGI_10017602;
	scaffold1670	TRF	Tandem_Repeat	138913	139087	165	+	.	.
scaffold1670	subtractBed	intrn	138913	139087	.	-	.	Parent=CGI_10017603;
	scaffold1670	TRF	Tandem_Repeat	138913	139087	165	+	.	.
scaffold1670	subtractBed	intrn	153446	153769	.	-	.	Parent=CGI_10017604;
	scaffold1670	TRF	Tandem_Repeat	153446	153769	450	+	.	.
scaffold1670	subtractBed	intrn	169600	169655	.	-	.	Parent=CGI_10017604;
	scaffold1670	TRF	Tandem_Repeat	169600	169655	112	+	.	.
scaffold1670	subtractBed	intrn	173970	174181	.	-	.	Parent=CGI_10017604;
	scaffold1670	TRF	Tandem_Repeat	173970	174181	379	+	.	.
scaffold1670	subtractBed	intrn	188740	189016	.	+	.	Parent=CGI_10017606;
	scaffold1670	TRF	Tandem_Repeat	188740	189016	242	+	.	.
scaffold1670	subtractBed	intrn	194247	194357	.	+	.	Parent=CGI_10017606;
	scaffold1670	TRF	Tandem_Repeat	194247	194357	179	+	.	.
scaffold1670	subtractBed	intrn	194252	194331	.	+	.	Parent=CGI_10017606;
	scaffold1670	TRF	Tandem_Repeat	194252	194331	56	+	.	.
scaffold1670	subtractBed	intrn	220764	220810	.	-	.	Parent=CGI_10017608;
	scaffold1670	TRF	Tandem_Repeat	220764	220810	94	+	.	.
scaffold1670	subtractBed	intrn	262253	262327	.	+	.	Parent=CGI_10017610;
	scaffold1670	TRF	Tandem_Repeat	262253	262327	143	+	.	.
scaffold1670	subtractBed	intrn	267796	267887	.	+	.	Parent=CGI_10017610;
	scaffold1670	TRF	Tandem_Repeat	267796	267887	57	+	.	.
scaffold1670	subtractBed	intrn	267796	267852	.	+	.	Parent=CGI_10017610;
	scaffold1670	TRF	Tandem_Repeat	267796	267852	59	+	.	.
scaffold1670	subtractBed	intrn	280547	280591	.	+	.	Parent=CGI_10017612;
	scaffold1670	TRF	Tandem_Repeat	280547	280591	90	+	.	.
scaffold1670	subtractBed	intrn	288959	290358	.	-	.	Parent=CGI_10017613;
	scaffold1670	TRF	Tandem_Repeat	288959	290358	1578	+	.	.
scaffold1670	subtractBed	intrn	288959	290358	.	-	.	Parent=CGI_10017613;
	scaffold1670	TRF	Tandem_Repeat	288959	290358	1706	+	.	.
scaffold1670	subtractBed	intrn	319762	320143	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	319762	320143	516	+	.	.
scaffold1670	subtractBed	intrn	320818	321224	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	320818	321224	445	+	.	.
scaffold1670	subtractBed	intrn	320818	321224	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	320818	321224	445	+	.	.
scaffold1670	subtractBed	intrn	320818	321224	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	320818	321224	451	+	.	.
scaffold1670	subtractBed	intrn	321012	321072	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	321012	321072	54	+	.	.
scaffold1670	subtractBed	intrn	321562	321670	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	321562	321670	101	+	.	.
scaffold1670	subtractBed	intrn	321577	321670	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	321577	321670	134	+	.	.
scaffold1670	subtractBed	intrn	322421	322531	.	+	.	Parent=CGI_10017618;
	scaffold1670	TRF	Tandem_Repeat	322421	322531	71	+	.	.
scaffold1670	subtractBed	intrn	317163	317936	.	+	.	Parent=CGI_10017618;
	scaffold1670	WUBlastX	LTR_Ngaro	317163	317936	112	-	.	.
scaffold1670	subtractBed	intrn	317322	318041	.	+	.	Parent=CGI_10017618;
	scaffold1670	WUBlastX	LTR_Ngaro	317322	318041	243	-	.	.
scaffold1670	subtractBed	intrn	387339	387399	.	-	.	Parent=CGI_10017623;
	scaffold1670	TRF	Tandem_Repeat	387339	387399	95	+	.	.
scaffold1670	subtractBed	intrn	398651	399004	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_Jockey	398651	399004	69	+	.	.
scaffold1670	subtractBed	intrn	406850	407188	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_RTE-X	406850	407188	80	+	.	.
scaffold1670	subtractBed	intrn	398454	398639	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	398454	398639	29	+	.	.
scaffold1670	subtractBed	intrn	398753	399064	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	398753	399064	133	+	.	.
scaffold1670	subtractBed	intrn	399064	399243	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399064	399243	84	+	.	.
scaffold1670	subtractBed	intrn	398726	399004	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	398726	399004	219	+	.	.
scaffold1670	subtractBed	intrn	404146	404607	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	404146	404607	205	+	.	.
scaffold1670	subtractBed	intrn	399215	399331	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399215	399331	30	+	.	.
scaffold1670	subtractBed	intrn	398765	399175	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	398765	399175	104	+	.	.
scaffold1670	subtractBed	intrn	404065	404610	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	404065	404610	160	+	.	.
scaffold1670	subtractBed	intrn	399500	399838	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_L2	399500	399838	44	+	.	.
scaffold1670	subtractBed	intrn	399593	399832	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399593	399832	62	+	.	.
scaffold1670	subtractBed	intrn	399838	399957	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399838	399957	46	+	.	.
scaffold1670	subtractBed	intrn	399043	399291	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399043	399291	60	+	.	.
scaffold1670	subtractBed	intrn	398265	398594	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	398265	398594	89	+	.	.
scaffold1670	subtractBed	intrn	399647	399868	.	-	.	Parent=CGI_10017623;
	scaffold1670	WUBlastX	LINE_CR1	399647	399868	103	+	.	.
scaffold1670	subtractBed	intrn	387339	387399	.	+	.	Parent=CGI_10017624;
	scaffold1670	TRF	Tandem_Repeat	387339	387399	95	+	.	.
scaffold1670	subtractBed	intrn	456522	456908	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LTR_DIRS	456522	456908	102	+	.	.
scaffold1670	subtractBed	intrn	456913	457107	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LTR_DIRS	456913	457107	29	+	.	.
scaffold1670	subtractBed	intrn	456582	457040	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LTR_DIRS	456582	457040	141	+	.	.
scaffold1670	subtractBed	intrn	456585	456908	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LTR_DIRS	456585	456908	152	+	.	.
scaffold1670	subtractBed	intrn	456390	456971	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LTR_Gypsy	456390	456971	63	+	.	.
scaffold1670	subtractBed	intrn	461217	462018	.	+	.	Parent=CGI_10017627;
	scaffold1670	TRF	Tandem_Repeat	461217	462018	981	+	.	.
scaffold1670	subtractBed	intrn	464476	465363	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	464476	465363	133	-	.	.
scaffold1670	subtractBed	intrn	465338	465586	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	465338	465586	135	-	.	.
scaffold1670	subtractBed	intrn	463633	464223	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	463633	464223	102	-	.	.
scaffold1670	subtractBed	intrn	465359	465640	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1	465359	465640	108	-	.	.
scaffold1670	subtractBed	intrn	464461	465078	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	464461	465078	139	-	.	.
scaffold1670	subtractBed	intrn	463663	465120	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1	463663	465120	22	-	.	.
scaffold1670	subtractBed	intrn	465350	465709	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	465350	465709	72	-	.	.
scaffold1670	subtractBed	intrn	464680	465027	.	+	.	Parent=CGI_10017627;
	scaffold1670	WUBlastX	LINE_L1-Tx1	464680	465027	150	-	.	.
scaffold1670	subtractBed	intrn	468648	468711	.	+	.	Parent=CGI_10017627;
	scaffold1670	TRF	Tandem_Repeat	468648	468711	83	+	.	.
scaffold1670	subtractBed	intrn	487903	488085	.	+	.	Parent=CGI_10017628;
	scaffold1670	TRF	Tandem_Repeat	487903	488085	54	+	.	.
scaffold1671	subtractBed	intrn	50590	50838	.	+	.	Parent=CGI_10015136;
	scaffold1671	WUBlastX	LINE_CR1	50590	50838	85	-	.	.
scaffold1671	subtractBed	intrn	52884	52945	.	+	.	Parent=CGI_10015136;
	scaffold1671	TRF	Tandem_Repeat	52884	52945	115	+	.	.
scaffold1671	subtractBed	intrn	146136	146852	.	-	.	Parent=CGI_10015138;
	scaffold1671	TRF	Tandem_Repeat	146136	146852	769	+	.	.
scaffold1671	subtractBed	intrn	149490	149560	.	-	.	Parent=CGI_10015138;
	scaffold1671	TRF	Tandem_Repeat	149490	149560	142	+	.	.
scaffold1671	subtractBed	intrn	149833	149943	.	-	.	Parent=CGI_10015138;
	scaffold1671	TRF	Tandem_Repeat	149833	149943	102	+	.	.
scaffold1671	subtractBed	intrn	149833	149943	.	-	.	Parent=CGI_10015138;
	scaffold1671	TRF	Tandem_Repeat	149833	149943	129	+	.	.
scaffold1671	subtractBed	intrn	179979	180027	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	179979	180027	98	+	.	.
scaffold1671	subtractBed	intrn	184226	184259	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	184226	184259	59	+	.	.
scaffold1671	subtractBed	intrn	184851	184931	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	184851	184931	101	+	.	.
scaffold1671	subtractBed	intrn	185395	185673	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	185395	185673	263	+	.	.
scaffold1671	subtractBed	intrn	185395	185689	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	185395	185689	283	+	.	.
scaffold1671	subtractBed	intrn	185395	185672	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	185395	185672	272	+	.	.
scaffold1671	subtractBed	intrn	186341	186378	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	186341	186378	51	+	.	.
scaffold1671	subtractBed	intrn	189134	189869	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	189134	189869	1062	+	.	.
scaffold1671	subtractBed	intrn	191124	191411	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	191124	191411	418	+	.	.
scaffold1671	subtractBed	intrn	193614	193791	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	193614	193791	148	+	.	.
scaffold1671	subtractBed	intrn	193614	194022	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	193614	194022	336	+	.	.
scaffold1671	subtractBed	intrn	193621	194020	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	193621	194020	193	+	.	.
scaffold1671	subtractBed	intrn	196255	196542	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	196255	196542	441	+	.	.
scaffold1671	subtractBed	intrn	198274	198742	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	198274	198742	250	+	.	.
scaffold1671	subtractBed	intrn	198274	198733	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	198274	198733	361	+	.	.
scaffold1671	subtractBed	intrn	198279	198735	.	-	.	Parent=CGI_10015143;
	scaffold1671	TRF	Tandem_Repeat	198279	198735	328	+	.	.
scaffold1671	subtractBed	intrn	204391	204424	.	-	.	Parent=CGI_10015144;
	scaffold1671	TRF	Tandem_Repeat	204391	204424	61	+	.	.
scaffold1671	subtractBed	intrn	205482	205517	.	-	.	Parent=CGI_10015144;
	scaffold1671	TRF	Tandem_Repeat	205482	205517	72	+	.	.
scaffold1671	subtractBed	intrn	221821	221864	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	221760	221864	21	+	.	.
scaffold1671	subtractBed	intrn	221821	221831	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	221739	221831	32	+	.	.
scaffold1671	subtractBed	intrn	221821	221831	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	221442	221831	29	+	.	.
scaffold1671	subtractBed	intrn	226405	226428	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	226405	226494	36	+	.	.
scaffold1671	subtractBed	intrn	226517	226560	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	226429	226560	28	+	.	.
scaffold1671	subtractBed	intrn	227009	227017	.	+	.	Parent=CGI_10015147;
	scaffold1671	WUBlastX	RC_Helitron	226874	227017	42	+	.	.
scaffold1671	subtractBed	intrn	299671	299715	.	+	.	Parent=CGI_10015153;
	scaffold1671	TRF	Tandem_Repeat	299671	299715	90	+	.	.
scaffold1671	subtractBed	intrn	301651	301734	.	+	.	Parent=CGI_10015153;
	scaffold1671	TRF	Tandem_Repeat	301651	301734	57	+	.	.
scaffold1671	subtractBed	intrn	308615	308817	.	+	.	Parent=CGI_10015154;
	scaffold1671	TRF	Tandem_Repeat	308615	308817	174	+	.	.
scaffold1671	subtractBed	intrn	308929	309015	.	+	.	Parent=CGI_10015154;
	scaffold1671	TRF	Tandem_Repeat	308929	309015	104	+	.	.
scaffold1671	subtractBed	intrn	310559	311035	.	+	.	Parent=CGI_10015154;
	scaffold1671	WUBlastX	LINE_RTE-BovB	310559	311035	93	-	.	.
scaffold1671	subtractBed	intrn	310661	311083	.	+	.	Parent=CGI_10015154;
	scaffold1671	WUBlastX	LINE_RTE-BovB	310661	311083	170	-	.	.
scaffold1671	subtractBed	intrn	311070	311514	.	+	.	Parent=CGI_10015154;
	scaffold1671	WUBlastX	LINE_RTE-BovB	311070	311555	45	-	.	.
scaffold1671	subtractBed	intrn	311154	311468	.	+	.	Parent=CGI_10015154;
	scaffold1671	WUBlastX	LINE_RTE-BovB	311154	311468	97	-	.	.
scaffold1671	subtractBed	intrn	311049	311414	.	+	.	Parent=CGI_10015154;
	scaffold1671	WUBlastX	LINE_RTE-BovB	311049	311414	240	-	.	.
scaffold1671	subtractBed	intrn	329723	329837	.	+	.	Parent=CGI_10015155;
	scaffold1671	TRF	Tandem_Repeat	329723	329837	176	+	.	.
scaffold1671	subtractBed	intrn	330302	330467	.	+	.	Parent=CGI_10015155;
	scaffold1671	TRF	Tandem_Repeat	330302	330467	255	+	.	.
scaffold1671	subtractBed	intrn	331023	331315	.	+	.	Parent=CGI_10015155;
	scaffold1671	TRF	Tandem_Repeat	331012	331315	263	+	.	.
scaffold1671	subtractBed	intrn	335264	336288	.	+	.	Parent=CGI_10015155;
	scaffold1671	TRF	Tandem_Repeat	335264	336288	1638	+	.	.
scaffold1671	subtractBed	intrn	347913	347975	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	347913	347975	117	+	.	.
scaffold1671	subtractBed	intrn	348986	349025	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	348986	349025	80	+	.	.
scaffold1671	subtractBed	intrn	354356	356033	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	354356	356033	1832	+	.	.
scaffold1671	subtractBed	intrn	354456	356033	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	354456	356033	1804	+	.	.
scaffold1671	subtractBed	intrn	354356	356033	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	354356	356033	1802	+	.	.
scaffold1671	subtractBed	intrn	358706	358766	.	+	.	Parent=CGI_10015156;
	scaffold1671	TRF	Tandem_Repeat	358706	358766	72	+	.	.
scaffold1671	subtractBed	intrn	384603	384824	.	-	.	Parent=CGI_10015157;
	scaffold1671	WUBlastX	DNA_Sola	384603	384824	60	-	.	.
scaffold1671	subtractBed	intrn	409479	409539	.	-	.	Parent=CGI_10015158;
	scaffold1671	TRF	Tandem_Repeat	409479	409539	122	+	.	.
scaffold1671	subtractBed	intrn	412934	413638	.	+	.	Parent=CGI_10015159;
	scaffold1671	WUBlastX	LINE_RTE-BovB	412934	413638	403	+	.	.
scaffold1671	subtractBed	intrn	413640	413975	.	+	.	Parent=CGI_10015159;
	scaffold1671	WUBlastX	LINE_RTE-BovB	413640	413975	204	+	.	.
scaffold1671	subtractBed	intrn	412934	413908	.	+	.	Parent=CGI_10015159;
	scaffold1671	WUBlastX	LINE_RTE-BovB	412934	413908	225	+	.	.
scaffold1671	subtractBed	intrn	420404	420452	.	+	.	Parent=CGI_10015159;
	scaffold1671	TRF	Tandem_Repeat	420404	420452	73	+	.	.
scaffold1672	subtractBed	intrn	36927	36957	.	-	.	Parent=CGI_10004940;
	scaffold1672	TRF	Tandem_Repeat	36927	36957	53	+	.	.
scaffold1672	subtractBed	intrn	54259	54297	.	+	.	Parent=CGI_10004941;
	scaffold1672	TRF	Tandem_Repeat	54259	54297	78	+	.	.
scaffold1672	subtractBed	intrn	64848	64921	.	+	.	Parent=CGI_10004942;
	scaffold1672	TRF	Tandem_Repeat	64848	64921	148	+	.	.
scaffold1672	subtractBed	intrn	60296	61171	.	+	.	Parent=CGI_10004942;
	scaffold1672	WUBlastX	LTR_DIRS	60296	61171	550	+	.	.
scaffold1672	subtractBed	intrn	57713	57772	.	+	.	Parent=CGI_10004942;
	scaffold1672	WUBlastX	LTR_Gypsy	57713	57772	20	+	.	.
scaffold1672	subtractBed	intrn	58431	60407	.	+	.	Parent=CGI_10004942;
	scaffold1672	WUBlastX	LTR_DIRS	58431	60407	1331	+	.	.
scaffold1672	subtractBed	intrn	57963	60122	.	+	.	Parent=CGI_10004942;
	scaffold1672	WUBlastX	LTR_DIRS	57963	60122	382	+	.	.
scaffold1672	subtractBed	intrn	67362	67430	.	+	.	Parent=CGI_10004942;
	scaffold1672	TRF	Tandem_Repeat	67362	67430	129	+	.	.
scaffold1672	subtractBed	intrn	71589	71906	.	+	.	Parent=CGI_10004942;
	scaffold1672	TRF	Tandem_Repeat	71589	71906	591	+	.	.
scaffold1672	subtractBed	intrn	71901	72163	.	+	.	Parent=CGI_10004942;
	scaffold1672	TRF	Tandem_Repeat	71901	72163	438	+	.	.
scaffold1672	subtractBed	intrn	77310	77585	.	+	.	Parent=CGI_10004942;
	scaffold1672	WUBlastX	LTR_Gypsy	77310	77585	31	+	.	.
scaffold1672	subtractBed	intrn	79070	79114	.	+	.	Parent=CGI_10004942;
	scaffold1672	TRF	Tandem_Repeat	79070	79114	90	+	.	.
scaffold1672	subtractBed	intrn	77310	77585	.	-	.	Parent=CGI_10004943;
	scaffold1672	WUBlastX	LTR_Gypsy	77310	77585	31	+	.	.
scaffold1672	subtractBed	intrn	79070	79114	.	-	.	Parent=CGI_10004943;
	scaffold1672	TRF	Tandem_Repeat	79070	79114	90	+	.	.
scaffold1673	subtractBed	intrn	11876	11993	.	-	.	Parent=CGI_10013565;
	scaffold1673	TRF	Tandem_Repeat	11876	11993	155	+	.	.
scaffold1673	subtractBed	intrn	17559	17717	.	-	.	Parent=CGI_10013565;
	scaffold1673	TRF	Tandem_Repeat	17559	17717	126	+	.	.
scaffold1673	subtractBed	intrn	25937	26085	.	-	.	Parent=CGI_10013565;
	scaffold1673	TRF	Tandem_Repeat	25937	26085	282	+	.	.
scaffold1673	subtractBed	intrn	27336	27729	.	-	.	Parent=CGI_10013565;
	scaffold1673	TRF	Tandem_Repeat	27336	27749	533	+	.	.
scaffold1673	subtractBed	intrn	29808	29862	.	-	.	Parent=CGI_10013565;
	scaffold1673	TRF	Tandem_Repeat	29808	29862	110	+	.	.
scaffold1673	subtractBed	intrn	11876	11993	.	+	.	Parent=CGI_10013566;
	scaffold1673	TRF	Tandem_Repeat	11876	11993	155	+	.	.
scaffold1673	subtractBed	intrn	52988	53125	.	-	.	Parent=CGI_10013570;
	scaffold1673	WUBlastX	LTR_Gypsy	52988	53125	131	-	.	.
scaffold1673	subtractBed	intrn	52838	53119	.	-	.	Parent=CGI_10013570;
	scaffold1673	WUBlastX	LTR_Gypsy	52838	53119	94	-	.	.
scaffold1673	subtractBed	intrn	53688	54020	.	-	.	Parent=CGI_10013570;
	scaffold1673	WUBlastX	LTR_Gypsy-Cigr	53688	54020	89	-	.	.
scaffold1673	subtractBed	intrn	52922	53119	.	-	.	Parent=CGI_10013570;
	scaffold1673	WUBlastX	LTR_Gypsy-Cigr	52922	53119	125	-	.	.
scaffold1673	subtractBed	intrn	75179	75234	.	+	.	Parent=CGI_10013571;
	scaffold1673	TRF	Tandem_Repeat	75179	75234	53	+	.	.
scaffold1673	subtractBed	intrn	75176	75231	.	+	.	Parent=CGI_10013571;
	scaffold1673	TRF	Tandem_Repeat	75176	75231	60	+	.	.
scaffold1673	subtractBed	intrn	79735	79779	.	+	.	Parent=CGI_10013571;
	scaffold1673	TRF	Tandem_Repeat	79735	79779	63	+	.	.
scaffold1673	subtractBed	intrn	87262	87378	.	+	.	Parent=CGI_10013571;
	scaffold1673	WUBlastX	LTR_Ngaro	87262	87378	72	-	.	.
scaffold1673	subtractBed	intrn	101114	101165	.	+	.	Parent=CGI_10013571;
	scaffold1673	TRF	Tandem_Repeat	101114	101165	104	+	.	.
scaffold1673	subtractBed	intrn	99037	99915	.	+	.	Parent=CGI_10013571;
	scaffold1673	WUBlastX	LINE_L1	99037	99915	64	+	.	.
scaffold1673	subtractBed	intrn	99172	100023	.	+	.	Parent=CGI_10013571;
	scaffold1673	WUBlastX	LINE_L1-Tx1	99172	100023	477	+	.	.
scaffold1673	subtractBed	intrn	100031	100969	.	+	.	Parent=CGI_10013571;
	scaffold1673	WUBlastX	LINE_L1-Tx1	100031	100969	158	+	.	.
scaffold1673	subtractBed	intrn	106454	106484	.	+	.	Parent=CGI_10013571;
	scaffold1673	TRF	Tandem_Repeat	106454	106484	53	+	.	.
scaffold1673	subtractBed	intrn	103994	104674	.	+	.	Parent=CGI_10013571;
	scaffold1673	WUBlastX	DNA_Crypton	103994	104674	223	+	.	.
scaffold1673	subtractBed	intrn	118030	118056	.	-	.	Parent=CGI_10013572;
	scaffold1673	TRF	Tandem_Repeat	118030	118056	54	+	.	.
scaffold1673	subtractBed	intrn	170568	170601	.	-	.	Parent=CGI_10013573;
	scaffold1673	TRF	Tandem_Repeat	170568	170601	50	+	.	.
scaffold1673	subtractBed	intrn	175175	175213	.	-	.	Parent=CGI_10013573;
	scaffold1673	TRF	Tandem_Repeat	175175	175213	51	+	.	.
scaffold1673	subtractBed	intrn	175213	175252	.	-	.	Parent=CGI_10013573;
	scaffold1673	TRF	Tandem_Repeat	175213	175252	80	+	.	.
scaffold1673	subtractBed	intrn	229668	230372	.	-	.	Parent=CGI_10013574;
	scaffold1673	TRF	Tandem_Repeat	229668	230372	888	+	.	.
scaffold1673	subtractBed	intrn	247905	248481	.	+	.	Parent=CGI_10013575;
	scaffold1673	TRF	Tandem_Repeat	247905	248481	863	+	.	.
scaffold1673	subtractBed	intrn	321501	321733	.	+	.	Parent=CGI_10013580;
	scaffold1673	TRF	Tandem_Repeat	321501	321733	394	+	.	.
scaffold1673	subtractBed	intrn	321734	322190	.	+	.	Parent=CGI_10013580;
	scaffold1673	TRF	Tandem_Repeat	321734	322190	702	+	.	.
scaffold1673	subtractBed	intrn	322192	322476	.	+	.	Parent=CGI_10013580;
	scaffold1673	TRF	Tandem_Repeat	322192	322476	247	+	.	.
scaffold1673	subtractBed	intrn	337559	337693	.	+	.	Parent=CGI_10013581;
	scaffold1673	WUBlastX	LINE_RTE-BovB	337559	337693	51	-	.	.
scaffold1675	subtractBed	intrn	7606	7665	.	-	.	Parent=CGI_10001288;
	scaffold1675	TRF	Tandem_Repeat	7606	7665	84	+	.	.
scaffold1675	subtractBed	intrn	9187	9219	.	-	.	Parent=CGI_10001288;
	scaffold1675	TRF	Tandem_Repeat	9187	9219	66	+	.	.
scaffold1675	subtractBed	intrn	9344	9400	.	-	.	Parent=CGI_10001288;
	scaffold1675	TRF	Tandem_Repeat	9344	9400	114	+	.	.
scaffold1675	subtractBed	intrn	10382	10864	.	-	.	Parent=CGI_10001288;
	scaffold1675	WUBlastX	LTR_DIRS	10382	10864	58	-	.	.
scaffold1675	subtractBed	intrn	10126	10383	.	-	.	Parent=CGI_10001288;
	scaffold1675	WUBlastX	LTR_DIRS	10126	10383	63	-	.	.
scaffold1675	subtractBed	intrn	10391	10768	.	-	.	Parent=CGI_10001288;
	scaffold1675	WUBlastX	LTR_DIRS	10391	10768	194	-	.	.
scaffold1678	subtractBed	intrn	10367	10424	.	+	.	Parent=CGI_10010377;
	scaffold1678	TRF	Tandem_Repeat	10367	10424	52	+	.	.
scaffold1678	subtractBed	intrn	10367	10424	.	-	.	Parent=CGI_10010378;
	scaffold1678	TRF	Tandem_Repeat	10367	10424	52	+	.	.
scaffold1678	subtractBed	intrn	35023	35080	.	+	.	Parent=CGI_10010379;
	scaffold1678	TRF	Tandem_Repeat	35023	35080	75	+	.	.
scaffold1678	subtractBed	intrn	41110	41150	.	+	.	Parent=CGI_10010379;
	scaffold1678	TRF	Tandem_Repeat	41110	41150	82	+	.	.
scaffold1678	subtractBed	intrn	41819	41867	.	+	.	Parent=CGI_10010379;
	scaffold1678	TRF	Tandem_Repeat	41819	41867	98	+	.	.
scaffold1678	subtractBed	intrn	35023	35080	.	-	.	Parent=CGI_10010380;
	scaffold1678	TRF	Tandem_Repeat	35023	35080	75	+	.	.
scaffold1678	subtractBed	intrn	57070	57098	.	+	.	Parent=CGI_10010381;
	scaffold1678	TRF	Tandem_Repeat	57070	57098	58	+	.	.
scaffold1678	subtractBed	intrn	106093	107554	.	-	.	Parent=CGI_10010382;
	scaffold1678	TRF	Tandem_Repeat	106093	107554	2012	+	.	.
scaffold1678	subtractBed	intrn	106093	107554	.	-	.	Parent=CGI_10010382;
	scaffold1678	TRF	Tandem_Repeat	106093	107554	2015	+	.	.
scaffold1678	subtractBed	intrn	107585	107636	.	-	.	Parent=CGI_10010382;
	scaffold1678	TRF	Tandem_Repeat	107585	107636	68	+	.	.
scaffold1678	subtractBed	intrn	110938	110967	.	-	.	Parent=CGI_10010382;
	scaffold1678	TRF	Tandem_Repeat	110938	110967	60	+	.	.
scaffold1678	subtractBed	intrn	115534	115586	.	-	.	Parent=CGI_10010382;
	scaffold1678	TRF	Tandem_Repeat	115534	115586	106	+	.	.
scaffold1678	subtractBed	intrn	141238	141293	.	-	.	Parent=CGI_10010385;
	scaffold1678	TRF	Tandem_Repeat	141238	141293	112	+	.	.
scaffold1678	subtractBed	intrn	162412	162795	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	162412	162795	463	+	.	.
scaffold1678	subtractBed	intrn	169218	169699	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	169218	169699	639	+	.	.
scaffold1678	subtractBed	intrn	171013	171065	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	171013	171065	70	+	.	.
scaffold1678	subtractBed	intrn	172480	172566	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	172480	172566	104	+	.	.
scaffold1678	subtractBed	intrn	172659	172867	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	172659	172867	131	+	.	.
scaffold1678	subtractBed	intrn	172867	173013	.	-	.	Parent=CGI_10010386;
	scaffold1678	TRF	Tandem_Repeat	172867	173013	89	+	.	.
scaffold1678	subtractBed	intrn	173544	173753	.	-	.	Parent=CGI_10010386;
	scaffold1678	WUBlastX	DNA_IS4EU	173544	173753	62	+	.	.
scaffold1678	subtractBed	intrn	174224	174382	.	-	.	Parent=CGI_10010386;
	scaffold1678	WUBlastX	DNA_IS4EU	174224	174382	31	+	.	.
scaffold1678	subtractBed	intrn	183240	183668	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	183240	183668	410	+	.	.
scaffold1678	subtractBed	intrn	183240	184538	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	183240	184538	706	+	.	.
scaffold1678	subtractBed	intrn	183240	184538	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	183240	184538	962	+	.	.
scaffold1678	subtractBed	intrn	183666	184538	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	183666	184538	948	+	.	.
scaffold1678	subtractBed	intrn	187240	187282	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	187240	187282	86	+	.	.
scaffold1678	subtractBed	intrn	190392	190450	.	+	.	Parent=CGI_10010387;
	scaffold1678	TRF	Tandem_Repeat	190392	190450	118	+	.	.
scaffold1678	subtractBed	intrn	200410	200436	.	-	.	Parent=CGI_10010389;
	scaffold1678	TRF	Tandem_Repeat	200410	200436	54	+	.	.
scaffold1678	subtractBed	intrn	215470	215753	.	+	.	Parent=CGI_10010390;
	scaffold1678	TRF	Tandem_Repeat	215470	215753	460	+	.	.
scaffold1678	subtractBed	intrn	238620	238843	.	-	.	Parent=CGI_10010394;
	scaffold1678	TRF	Tandem_Repeat	238620	238843	306	+	.	.
scaffold1678	subtractBed	intrn	238620	238837	.	-	.	Parent=CGI_10010394;
	scaffold1678	TRF	Tandem_Repeat	238620	238837	267	+	.	.
scaffold1679	subtractBed	intrn	27572	28150	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	27572	28150	139	-	.	.
scaffold1679	subtractBed	intrn	29308	30708	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	29308	30708	1157	-	.	.
scaffold1679	subtractBed	intrn	32086	32553	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	32086	32553	43	-	.	.
scaffold1679	subtractBed	intrn	28792	32187	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	28792	32187	652	-	.	.
scaffold1679	subtractBed	intrn	28624	31473	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	28624	31473	1131	-	.	.
scaffold1679	subtractBed	intrn	31174	32424	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	31174	32424	47	-	.	.
scaffold1679	subtractBed	intrn	28125	28622	.	-	.	Parent=CGI_10002338;
	scaffold1679	WUBlastX	LTR_Gypsy	28125	28622	258	-	.	.
scaffold168	subtractBed	intrn	21185	21262	.	-	.	Parent=CGI_10025582;
	scaffold168	TRF	Tandem_Repeat	21185	21262	138	+	.	.
scaffold168	subtractBed	intrn	20985	21176	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_CR1	20985	21176	96	-	.	.
scaffold168	subtractBed	intrn	20329	20493	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_CR1	20329	20493	35	-	.	.
scaffold168	subtractBed	intrn	20667	20744	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_RTE-X	20667	20744	24	-	.	.
scaffold168	subtractBed	intrn	19689	20042	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_RTE-X	19689	20042	58	-	.	.
scaffold168	subtractBed	intrn	20158	20283	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_RTE-X	20158	20283	58	-	.	.
scaffold168	subtractBed	intrn	20356	20673	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_RTE-X	20356	20673	133	-	.	.
scaffold168	subtractBed	intrn	20688	21128	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_RTE-X	20688	21128	111	-	.	.
scaffold168	subtractBed	intrn	20260	20466	.	-	.	Parent=CGI_10025582;
	scaffold168	WUBlastX	LINE_CR1	20260	20466	21	-	.	.
scaffold168	subtractBed	intrn	138406	138455	.	+	.	Parent=CGI_10025585;
	scaffold168	TRF	Tandem_Repeat	138406	138455	93	+	.	.
scaffold168	subtractBed	intrn	178411	178497	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	178411	178497	30	-	.	.
scaffold168	subtractBed	intrn	178618	178620	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	178618	178851	34	-	.	.
scaffold168	subtractBed	intrn	179314	179562	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	179314	179562	101	-	.	.
scaffold168	subtractBed	intrn	179668	179673	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	179668	179853	24	-	.	.
scaffold168	subtractBed	intrn	178971	179180	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	178971	179180	56	-	.	.
scaffold168	subtractBed	intrn	178968	179126	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	178968	179126	62	-	.	.
scaffold168	subtractBed	intrn	179317	179649	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	179317	179649	71	-	.	.
scaffold168	subtractBed	intrn	179848	179853	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	DNA_MuDR	179668	179853	24	-	.	.
scaffold168	subtractBed	intrn	182095	182274	.	-	.	Parent=CGI_10025586;
	scaffold168	WUBlastX	LINE_CR1-L2	182095	182274	49	+	.	.
scaffold168	subtractBed	intrn	269458	269634	.	+	.	Parent=CGI_10025588;
	scaffold168	TRF	Tandem_Repeat	269458	269665	150	+	.	.
scaffold168	subtractBed	intrn	321488	321554	.	-	.	Parent=CGI_10025590;
	scaffold168	TRF	Tandem_Repeat	321488	321554	80	+	.	.
scaffold168	subtractBed	intrn	323206	323248	.	-	.	Parent=CGI_10025590;
	scaffold168	TRF	Tandem_Repeat	323206	323248	86	+	.	.
scaffold168	subtractBed	intrn	323546	323579	.	-	.	Parent=CGI_10025590;
	scaffold168	TRF	Tandem_Repeat	323546	323579	59	+	.	.
scaffold168	subtractBed	intrn	327735	327801	.	-	.	Parent=CGI_10025590;
	scaffold168	TRF	Tandem_Repeat	327735	327801	89	+	.	.
scaffold168	subtractBed	intrn	331042	331506	.	-	.	Parent=CGI_10025590;
	scaffold168	WUBlastX	LINE_L2	331042	331506	122	-	.	.
scaffold168	subtractBed	intrn	434597	434638	.	+	.	Parent=CGI_10025593;
	scaffold168	TRF	Tandem_Repeat	434597	434638	50	+	.	.
scaffold168	subtractBed	intrn	434803	435613	.	+	.	Parent=CGI_10025593;
	scaffold168	TRF	Tandem_Repeat	434803	435613	1500	+	.	.
scaffold168	subtractBed	intrn	473941	473991	.	-	.	Parent=CGI_10025596;
	scaffold168	TRF	Tandem_Repeat	473941	473991	50	+	.	.
scaffold168	subtractBed	intrn	586906	587757	.	+	.	Parent=CGI_10025600;
	scaffold168	WUBlastX	LINE_L2	586906	587757	186	-	.	.
scaffold168	subtractBed	intrn	586669	587613	.	+	.	Parent=CGI_10025600;
	scaffold168	WUBlastX	LINE_RTE-X	586669	587613	631	-	.	.
scaffold168	subtractBed	intrn	586651	586752	.	+	.	Parent=CGI_10025600;
	scaffold168	WUBlastX	LINE_Jockey	586651	586752	40	-	.	.
scaffold168	subtractBed	intrn	593065	593140	.	+	.	Parent=CGI_10025600;
	scaffold168	TRF	Tandem_Repeat	593065	593140	145	+	.	.
scaffold168	subtractBed	intrn	670164	670234	.	-	.	Parent=CGI_10025602;
	scaffold168	TRF	Tandem_Repeat	670164	670234	54	+	.	.
scaffold168	subtractBed	intrn	700868	701712	.	+	.	Parent=CGI_10025605;
	scaffold168	TRF	Tandem_Repeat	700868	701712	1195	+	.	.
scaffold168	subtractBed	intrn	700868	701712	.	-	.	Parent=CGI_10025606;
	scaffold168	TRF	Tandem_Repeat	700868	701712	1195	+	.	.
scaffold168	subtractBed	intrn	720182	720222	.	-	.	Parent=CGI_10025608;
	scaffold168	TRF	Tandem_Repeat	720182	720222	82	+	.	.
scaffold168	subtractBed	intrn	740871	740902	.	-	.	Parent=CGI_10025610;
	scaffold168	TRF	Tandem_Repeat	740871	740902	64	+	.	.
scaffold168	subtractBed	intrn	742235	742270	.	-	.	Parent=CGI_10025610;
	scaffold168	TRF	Tandem_Repeat	742235	742270	63	+	.	.
scaffold168	subtractBed	intrn	742847	742916	.	-	.	Parent=CGI_10025610;
	scaffold168	TRF	Tandem_Repeat	742847	742916	140	+	.	.
scaffold168	subtractBed	intrn	752707	752824	.	-	.	Parent=CGI_10025611;
	scaffold168	WUBlastX	LINE_L1	752318	752824	53	-	.	.
scaffold168	subtractBed	intrn	789266	789336	.	-	.	Parent=CGI_10025612;
	scaffold168	TRF	Tandem_Repeat	789266	789336	133	+	.	.
scaffold168	subtractBed	intrn	796934	796986	.	-	.	Parent=CGI_10025612;
	scaffold168	TRF	Tandem_Repeat	796934	796986	106	+	.	.
scaffold168	subtractBed	intrn	797599	797646	.	-	.	Parent=CGI_10025612;
	scaffold168	TRF	Tandem_Repeat	797599	797646	62	+	.	.
scaffold168	subtractBed	intrn	800114	800152	.	-	.	Parent=CGI_10025612;
	scaffold168	TRF	Tandem_Repeat	800114	800152	51	+	.	.
scaffold168	subtractBed	intrn	800945	801004	.	-	.	Parent=CGI_10025612;
	scaffold168	TRF	Tandem_Repeat	800945	801004	120	+	.	.
scaffold168	subtractBed	intrn	819950	820153	.	-	.	Parent=CGI_10025613;
	scaffold168	TRF	Tandem_Repeat	819950	820153	99	+	.	.
scaffold168	subtractBed	intrn	819943	820424	.	-	.	Parent=CGI_10025613;
	scaffold168	TRF	Tandem_Repeat	819943	820424	538	+	.	.
scaffold168	subtractBed	intrn	820160	820304	.	-	.	Parent=CGI_10025613;
	scaffold168	TRF	Tandem_Repeat	820160	820304	75	+	.	.
scaffold168	subtractBed	intrn	821370	822116	.	-	.	Parent=CGI_10025613;
	scaffold168	TRF	Tandem_Repeat	821370	822116	656	+	.	.
scaffold168	subtractBed	intrn	852013	852067	.	-	.	Parent=CGI_10025614;
	scaffold168	TRF	Tandem_Repeat	852013	852067	58	+	.	.
scaffold168	subtractBed	intrn	852020	852066	.	-	.	Parent=CGI_10025614;
	scaffold168	TRF	Tandem_Repeat	852020	852066	67	+	.	.
scaffold168	subtractBed	intrn	851300	852009	.	-	.	Parent=CGI_10025614;
	scaffold168	TRF	Tandem_Repeat	851300	852009	930	+	.	.
scaffold168	subtractBed	intrn	877320	878021	.	-	.	Parent=CGI_10025618;
	scaffold168	TRF	Tandem_Repeat	877320	878021	1051	+	.	.
scaffold168	subtractBed	intrn	877320	878021	.	+	.	Parent=CGI_10025619;
	scaffold168	TRF	Tandem_Repeat	877320	878021	1051	+	.	.
scaffold168	subtractBed	intrn	897908	897959	.	+	.	Parent=CGI_10025620;
	scaffold168	TRF	Tandem_Repeat	897908	897959	104	+	.	.
scaffold168	subtractBed	intrn	905225	905261	.	+	.	Parent=CGI_10025621;
	scaffold168	TRF	Tandem_Repeat	905225	905261	74	+	.	.
scaffold168	subtractBed	intrn	906400	906435	.	+	.	Parent=CGI_10025621;
	scaffold168	TRF	Tandem_Repeat	906400	906435	72	+	.	.
scaffold168	subtractBed	intrn	906451	906513	.	+	.	Parent=CGI_10025621;
	scaffold168	TRF	Tandem_Repeat	906451	906513	126	+	.	.
scaffold168	subtractBed	intrn	997759	999378	.	-	.	Parent=CGI_10025624;
	scaffold168	WUBlastX	DNA_PiggyBac	997759	999378	494	-	.	.
scaffold168	subtractBed	intrn	1003387	1003413	.	-	.	Parent=CGI_10025624;
	scaffold168	TRF	Tandem_Repeat	1003387	1003413	54	+	.	.
scaffold168	subtractBed	intrn	1062983	1063270	.	+	.	Parent=CGI_10025626;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062983	1063270	171	+	.	.
scaffold168	subtractBed	intrn	1061885	1062061	.	+	.	Parent=CGI_10025626;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1061885	1062061	26	+	.	.
scaffold168	subtractBed	intrn	1062346	1062465	.	+	.	Parent=CGI_10025626;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062346	1062465	60	+	.	.
scaffold168	subtractBed	intrn	1062911	1063264	.	+	.	Parent=CGI_10025626;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062911	1063264	115	+	.	.
scaffold168	subtractBed	intrn	1062346	1062504	.	+	.	Parent=CGI_10025626;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062346	1062504	33	+	.	.
scaffold168	subtractBed	intrn	1062983	1063270	.	-	.	Parent=CGI_10025627;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062983	1063270	171	+	.	.
scaffold168	subtractBed	intrn	1061885	1062061	.	-	.	Parent=CGI_10025627;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1061885	1062061	26	+	.	.
scaffold168	subtractBed	intrn	1062346	1062465	.	-	.	Parent=CGI_10025627;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062346	1062465	60	+	.	.
scaffold168	subtractBed	intrn	1062911	1063264	.	-	.	Parent=CGI_10025627;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062911	1063264	115	+	.	.
scaffold168	subtractBed	intrn	1062346	1062504	.	-	.	Parent=CGI_10025627;
	scaffold168	WUBlastX	DNA_TcMar-Tc1	1062346	1062504	33	+	.	.
scaffold168	subtractBed	intrn	1089258	1089286	.	+	.	Parent=CGI_10025629;
	scaffold168	TRF	Tandem_Repeat	1089258	1089286	58	+	.	.
scaffold1680	subtractBed	intrn	52827	52890	.	+	.	Parent=CGI_10004139;
	scaffold1680	TRF	Tandem_Repeat	52827	52890	128	+	.	.
scaffold1680	subtractBed	intrn	60410	61041	.	-	.	Parent=CGI_10004140;
	scaffold1680	TRF	Tandem_Repeat	60410	61050	577	+	.	.
scaffold1680	subtractBed	intrn	62663	63315	.	-	.	Parent=CGI_10004140;
	scaffold1680	TRF	Tandem_Repeat	62663	63318	778	+	.	.
scaffold1680	subtractBed	intrn	73494	74306	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy-Cigr	73494	74306	577	+	.	.
scaffold1680	subtractBed	intrn	74304	74582	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Copia	74304	74582	20	+	.	.
scaffold1680	subtractBed	intrn	69575	70492	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	69575	70492	62	+	.	.
scaffold1680	subtractBed	intrn	69914	70450	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy-Cigr	69914	70450	209	+	.	.
scaffold1680	subtractBed	intrn	70847	73489	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	70847	73489	1247	+	.	.
scaffold1680	subtractBed	intrn	73485	74465	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	73485	74465	376	+	.	.
scaffold1680	subtractBed	intrn	71324	73489	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	71324	73489	1396	+	.	.
scaffold1680	subtractBed	intrn	70049	72937	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	70049	72937	774	+	.	.
scaffold1680	subtractBed	intrn	69782	70291	.	-	.	Parent=CGI_10004140;
	scaffold1680	WUBlastX	LTR_Gypsy	69782	70291	64	+	.	.
scaffold1680	subtractBed	intrn	78245	79945	.	-	.	Parent=CGI_10004140;
	scaffold1680	TRF	Tandem_Repeat	78245	79945	2496	+	.	.
scaffold1680	subtractBed	intrn	80107	80152	.	-	.	Parent=CGI_10004140;
	scaffold1680	TRF	Tandem_Repeat	80107	80152	58	+	.	.
scaffold1680	subtractBed	intrn	86044	86076	.	-	.	Parent=CGI_10004140;
	scaffold1680	TRF	Tandem_Repeat	86044	86076	50	+	.	.
scaffold1682	subtractBed	intrn	4740	4776	.	+	.	Parent=CGI_10016038;
	scaffold1682	TRF	Tandem_Repeat	4740	4776	74	+	.	.
scaffold1682	subtractBed	intrn	5623	6331	.	+	.	Parent=CGI_10016038;
	scaffold1682	TRF	Tandem_Repeat	5623	6331	790	+	.	.
scaffold1682	subtractBed	intrn	198667	198708	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	198667	198708	50	+	.	.
scaffold1682	subtractBed	intrn	200681	200709	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	200681	200709	58	+	.	.
scaffold1682	subtractBed	intrn	204591	204672	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	204591	204672	146	+	.	.
scaffold1682	subtractBed	intrn	204670	204714	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	204670	204714	72	+	.	.
scaffold1682	subtractBed	intrn	206966	207193	.	-	.	Parent=CGI_10016049;
	scaffold1682	WUBlastX	LINE_RTE-X	206966	207193	25	+	.	.
scaffold1682	subtractBed	intrn	206377	206724	.	-	.	Parent=CGI_10016049;
	scaffold1682	WUBlastX	LINE_RTE-X	206377	206724	58	+	.	.
scaffold1682	subtractBed	intrn	206326	206649	.	-	.	Parent=CGI_10016049;
	scaffold1682	WUBlastX	LINE_L2	206326	206649	80	+	.	.
scaffold1682	subtractBed	intrn	207059	207241	.	-	.	Parent=CGI_10016049;
	scaffold1682	WUBlastX	LINE_RTE-X	207059	207241	22	+	.	.
scaffold1682	subtractBed	intrn	230548	231587	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	230548	231587	1386	+	.	.
scaffold1682	subtractBed	intrn	230294	231607	.	-	.	Parent=CGI_10016049;
	scaffold1682	TRF	Tandem_Repeat	230294	231607	1750	+	.	.
scaffold1682	subtractBed	intrn	346363	346387	.	-	.	Parent=CGI_10016052;
	scaffold1682	TRF	Tandem_Repeat	346363	346387	50	+	.	.
scaffold1682	subtractBed	intrn	414638	414682	.	-	.	Parent=CGI_10016056;
	scaffold1682	TRF	Tandem_Repeat	414638	414682	90	+	.	.
scaffold1682	subtractBed	intrn	425662	425901	.	-	.	Parent=CGI_10016058;
	scaffold1682	WUBlastX	LTR_Ngaro	425662	425901	85	-	.	.
scaffold1682	subtractBed	intrn	425384	425620	.	-	.	Parent=CGI_10016058;
	scaffold1682	WUBlastX	LTR_Ngaro	425384	425620	48	-	.	.
scaffold1682	subtractBed	intrn	449114	449317	.	-	.	Parent=CGI_10016060;
	scaffold1682	WUBlastX	DNA_TcMar-Marin	449114	449317	49	+	.	.
scaffold1682	subtractBed	intrn	448578	448763	.	-	.	Parent=CGI_10016060;
	scaffold1682	WUBlastX	DNA_TcMar-Marin	448578	448763	32	+	.	.
scaffold1682	subtractBed	intrn	448617	448751	.	-	.	Parent=CGI_10016060;
	scaffold1682	WUBlastX	DNA_TcMar-Marin	448617	448751	57	+	.	.
scaffold1682	subtractBed	intrn	448820	449266	.	-	.	Parent=CGI_10016060;
	scaffold1682	WUBlastX	DNA_TcMar-Marin	448820	449266	33	+	.	.
scaffold1686	subtractBed	intrn	10846	10983	.	-	.	Parent=CGI_10005072;
	scaffold1686	WUBlastX	LINE_Jockey	10846	10983	31	+	.	.
scaffold1686	subtractBed	intrn	13236	13317	.	-	.	Parent=CGI_10005073;
	scaffold1686	WUBlastX	DNA_Sola	13236	13463	41	-	.	.
scaffold1686	subtractBed	intrn	59363	59423	.	-	.	Parent=CGI_10005075;
	scaffold1686	WUBlastX	LINE_L1-Tx1	59363	59689	20	-	.	.
scaffold1686	subtractBed	intrn	59032	59349	.	-	.	Parent=CGI_10005075;
	scaffold1686	WUBlastX	LINE_L2	59032	59349	57	-	.	.
scaffold1686	subtractBed	intrn	59027	59373	.	-	.	Parent=CGI_10005075;
	scaffold1686	WUBlastX	LINE_L1	58930	59373	22	-	.	.
scaffold1686	subtractBed	intrn	115824	115889	.	-	.	Parent=CGI_10005077;
	scaffold1686	TRF	Tandem_Repeat	115824	115889	66	+	.	.
scaffold1686	subtractBed	intrn	115837	115882	.	-	.	Parent=CGI_10005077;
	scaffold1686	TRF	Tandem_Repeat	115837	115882	60	+	.	.
scaffold1686	subtractBed	intrn	116012	116052	.	-	.	Parent=CGI_10005077;
	scaffold1686	TRF	Tandem_Repeat	116012	116052	57	+	.	.
scaffold1687	subtractBed	intrn	12714	12758	.	-	.	Parent=CGI_10008388;
	scaffold1687	TRF	Tandem_Repeat	12714	12758	74	+	.	.
scaffold1687	subtractBed	intrn	87700	87748	.	+	.	Parent=CGI_10008391;
	scaffold1687	TRF	Tandem_Repeat	87700	87748	98	+	.	.
scaffold1687	subtractBed	intrn	90227	90343	.	+	.	Parent=CGI_10008391;
	scaffold1687	TRF	Tandem_Repeat	90227	90343	109	+	.	.
scaffold1687	subtractBed	intrn	90229	90343	.	+	.	Parent=CGI_10008391;
	scaffold1687	TRF	Tandem_Repeat	90229	90343	107	+	.	.
scaffold1687	subtractBed	intrn	108566	108759	.	+	.	Parent=CGI_10008392;
	scaffold1687	TRF	Tandem_Repeat	108554	108759	121	+	.	.
scaffold1687	subtractBed	intrn	137781	137815	.	+	.	Parent=CGI_10008393;
	scaffold1687	TRF	Tandem_Repeat	137781	137815	52	+	.	.
scaffold1687	subtractBed	intrn	138876	138931	.	+	.	Parent=CGI_10008393;
	scaffold1687	TRF	Tandem_Repeat	138876	138931	103	+	.	.
scaffold1687	subtractBed	intrn	176230	176232	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	175921	176232	33	+	.	.
scaffold1687	subtractBed	intrn	178891	179523	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_Kolobok-IS4	178891	179523	168	-	.	.
scaffold1687	subtractBed	intrn	176920	177084	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	176920	177084	52	+	.	.
scaffold1687	subtractBed	intrn	177195	177815	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	177195	177815	361	+	.	.
scaffold1687	subtractBed	intrn	178375	178560	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	178375	178560	98	+	.	.
scaffold1687	subtractBed	intrn	179567	179776	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	179567	179776	46	-	.	.
scaffold1687	subtractBed	intrn	178903	179430	.	+	.	Parent=CGI_10008394;
	scaffold1687	WUBlastX	DNA_IS4EU	178903	179430	177	-	.	.
scaffold1687	subtractBed	intrn	207152	207340	.	+	.	Parent=CGI_10008398;
	scaffold1687	TRF	Tandem_Repeat	207152	207340	279	+	.	.
scaffold1687	subtractBed	intrn	207180	207415	.	+	.	Parent=CGI_10008398;
	scaffold1687	TRF	Tandem_Repeat	207180	207415	168	+	.	.
scaffold1688	subtractBed	intrn	129692	129733	.	-	.	Parent=CGI_10009210;
	scaffold1688	TRF	Tandem_Repeat	129692	129733	84	+	.	.
scaffold1688	subtractBed	intrn	156333	156373	.	-	.	Parent=CGI_10009212;
	scaffold1688	TRF	Tandem_Repeat	156333	156373	82	+	.	.
scaffold1688	subtractBed	intrn	176900	177954	.	-	.	Parent=CGI_10009214;
	scaffold1688	TRF	Tandem_Repeat	176900	177954	1346	+	.	.
scaffold1688	subtractBed	intrn	188608	188667	.	+	.	Parent=CGI_10009215;
	scaffold1688	TRF	Tandem_Repeat	188608	188667	57	+	.	.
scaffold1688	subtractBed	intrn	188608	188668	.	+	.	Parent=CGI_10009215;
	scaffold1688	TRF	Tandem_Repeat	188608	188668	77	+	.	.
scaffold1688	subtractBed	intrn	188617	188668	.	+	.	Parent=CGI_10009215;
	scaffold1688	TRF	Tandem_Repeat	188617	188668	59	+	.	.
scaffold169	subtractBed	intrn	31894	32211	.	+	.	Parent=CGI_10022939;
	scaffold169	WUBlastX	LINE_RTE-X	31894	32211	44	+	.	.
scaffold169	subtractBed	intrn	96427	96480	.	-	.	Parent=CGI_10022943;
	scaffold169	TRF	Tandem_Repeat	96427	96480	65	+	.	.
scaffold169	subtractBed	intrn	97625	97737	.	-	.	Parent=CGI_10022943;
	scaffold169	TRF	Tandem_Repeat	97625	97737	129	+	.	.
scaffold169	subtractBed	intrn	103277	103315	.	+	.	Parent=CGI_10022944;
	scaffold169	TRF	Tandem_Repeat	103277	103315	78	+	.	.
scaffold169	subtractBed	intrn	135373	135486	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	135373	135486	185	+	.	.
scaffold169	subtractBed	intrn	135488	135542	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	135488	135542	110	+	.	.
scaffold169	subtractBed	intrn	137117	137165	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	137117	137165	84	+	.	.
scaffold169	subtractBed	intrn	140068	140111	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	140068	140111	88	+	.	.
scaffold169	subtractBed	intrn	140769	140848	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	140769	140848	160	+	.	.
scaffold169	subtractBed	intrn	145694	145781	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	145694	145781	128	+	.	.
scaffold169	subtractBed	intrn	145821	145891	.	-	.	Parent=CGI_10022945;
	scaffold169	TRF	Tandem_Repeat	145821	145891	87	+	.	.
scaffold169	subtractBed	intrn	160246	161323	.	-	.	Parent=CGI_10022946;
	scaffold169	TRF	Tandem_Repeat	160246	161323	1970	+	.	.
scaffold169	subtractBed	intrn	290460	290498	.	+	.	Parent=CGI_10022951;
	scaffold169	TRF	Tandem_Repeat	290460	290498	78	+	.	.
scaffold169	subtractBed	intrn	290629	290726	.	+	.	Parent=CGI_10022951;
	scaffold169	TRF	Tandem_Repeat	290629	290726	106	+	.	.
scaffold169	subtractBed	intrn	292882	292987	.	+	.	Parent=CGI_10022951;
	scaffold169	TRF	Tandem_Repeat	292882	292987	139	+	.	.
scaffold169	subtractBed	intrn	317158	317260	.	-	.	Parent=CGI_10022952;
	scaffold169	TRF	Tandem_Repeat	317158	317260	140	+	.	.
scaffold169	subtractBed	intrn	322300	322357	.	-	.	Parent=CGI_10022952;
	scaffold169	TRF	Tandem_Repeat	322300	322357	116	+	.	.
scaffold169	subtractBed	intrn	424545	424599	.	+	.	Parent=CGI_10022956;
	scaffold169	TRF	Tandem_Repeat	424545	424599	110	+	.	.
scaffold169	subtractBed	intrn	431272	431359	.	+	.	Parent=CGI_10022956;
	scaffold169	TRF	Tandem_Repeat	431272	431359	87	+	.	.
scaffold169	subtractBed	intrn	613077	613105	.	+	.	Parent=CGI_10022959;
	scaffold169	TRF	Tandem_Repeat	613077	613105	58	+	.	.
scaffold169	subtractBed	intrn	621637	622345	.	+	.	Parent=CGI_10022959;
	scaffold169	TRF	Tandem_Repeat	621637	622345	867	+	.	.
scaffold169	subtractBed	intrn	635126	636838	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	DNA_Sola	635126	636838	759	-	.	.
scaffold169	subtractBed	intrn	629126	629560	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Gypsy	629126	629560	146	+	.	.
scaffold169	subtractBed	intrn	630806	632353	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Gypsy	630806	632353	889	+	.	.
scaffold169	subtractBed	intrn	632429	632563	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Gypsy	632429	632563	26	+	.	.
scaffold169	subtractBed	intrn	632207	632455	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Copia	632207	632455	21	+	.	.
scaffold169	subtractBed	intrn	630210	630839	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Gypsy	630210	630839	342	+	.	.
scaffold169	subtractBed	intrn	629556	630692	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	LTR_Gypsy	629556	630692	871	+	.	.
scaffold169	subtractBed	intrn	635513	637102	.	-	.	Parent=CGI_10022960;
	scaffold169	WUBlastX	DNA_Sola	635513	637102	51	-	.	.
scaffold169	subtractBed	intrn	803577	804788	.	+	.	Parent=CGI_10022966;
	scaffold169	WUBlastX	DNA_Sola	803577	804788	67	+	.	.
scaffold169	subtractBed	intrn	804372	804908	.	+	.	Parent=CGI_10022966;
	scaffold169	WUBlastX	DNA_Sola	804372	804992	180	+	.	.
scaffold169	subtractBed	intrn	803790	804809	.	+	.	Parent=CGI_10022966;
	scaffold169	WUBlastX	DNA_Sola	803790	804809	70	+	.	.
scaffold1690	subtractBed	intrn	18986	19203	.	-	.	Parent=CGI_10003316;
	scaffold1690	TRF	Tandem_Repeat	18986	19203	330	+	.	.
scaffold1690	subtractBed	intrn	33044	33618	.	-	.	Parent=CGI_10003316;
	scaffold1690	TRF	Tandem_Repeat	33044	33618	1141	+	.	.
scaffold1690	subtractBed	intrn	35609	35648	.	-	.	Parent=CGI_10003316;
	scaffold1690	TRF	Tandem_Repeat	35609	35648	80	+	.	.
scaffold1690	subtractBed	intrn	36469	36893	.	-	.	Parent=CGI_10003316;
	scaffold1690	TRF	Tandem_Repeat	36469	36893	365	+	.	.
scaffold1690	subtractBed	intrn	47721	48044	.	-	.	Parent=CGI_10003316;
	scaffold1690	WUBlastX	LINE_L1-Tx1	47721	48044	44	+	.	.
scaffold1690	subtractBed	intrn	47775	48080	.	-	.	Parent=CGI_10003316;
	scaffold1690	WUBlastX	LINE_L1-Tx1	47775	48080	49	+	.	.
scaffold1692	subtractBed	intrn	46819	46869	.	+	.	Parent=CGI_10004025;
	scaffold1692	TRF	Tandem_Repeat	46819	46869	75	+	.	.
scaffold1692	subtractBed	intrn	47014	47059	.	+	.	Parent=CGI_10004025;
	scaffold1692	TRF	Tandem_Repeat	47014	47059	92	+	.	.
scaffold1692	subtractBed	intrn	52934	53344	.	+	.	Parent=CGI_10004025;
	scaffold1692	WUBlastX	LINE_L1-Tx1	52934	53344	104	-	.	.
scaffold1692	subtractBed	intrn	52510	52650	.	+	.	Parent=CGI_10004025;
	scaffold1692	WUBlastX	LINE_L1-Tx1	52510	52650	36	-	.	.
scaffold1692	subtractBed	intrn	52677	53060	.	+	.	Parent=CGI_10004025;
	scaffold1692	WUBlastX	LINE_L1-Tx1	52677	53060	90	-	.	.
scaffold1692	subtractBed	intrn	52955	53461	.	+	.	Parent=CGI_10004025;
	scaffold1692	WUBlastX	LINE_L1-Tx1	52955	53461	58	-	.	.
scaffold1692	subtractBed	intrn	57238	57343	.	+	.	Parent=CGI_10004025;
	scaffold1692	TRF	Tandem_Repeat	57238	57343	140	+	.	.
scaffold1692	subtractBed	intrn	57238	57343	.	-	.	Parent=CGI_10004026;
	scaffold1692	TRF	Tandem_Repeat	57238	57343	140	+	.	.
scaffold1692	subtractBed	intrn	67433	67474	.	-	.	Parent=CGI_10004026;
	scaffold1692	TRF	Tandem_Repeat	67433	67474	84	+	.	.
scaffold1696	subtractBed	intrn	3286	4203	.	-	.	Parent=CGI_10003674;
	scaffold1696	WUBlastX	LTR_Pao	3286	4203	818	+	.	.
scaffold1696	subtractBed	intrn	2524	2757	.	-	.	Parent=CGI_10003674;
	scaffold1696	WUBlastX	LTR_Pao	2524	2757	27	+	.	.
scaffold1696	subtractBed	intrn	3188	3280	.	-	.	Parent=CGI_10003674;
	scaffold1696	WUBlastX	LTR_Pao	3188	3280	74	+	.	.
scaffold1696	subtractBed	intrn	2760	3203	.	-	.	Parent=CGI_10003674;
	scaffold1696	WUBlastX	LTR_Pao	2760	3203	270	+	.	.
scaffold1696	subtractBed	intrn	17117	17163	.	-	.	Parent=CGI_10003674;
	scaffold1696	TRF	Tandem_Repeat	17117	17163	94	+	.	.
scaffold1696	subtractBed	intrn	21031	21085	.	-	.	Parent=CGI_10003674;
	scaffold1696	TRF	Tandem_Repeat	21031	21085	110	+	.	.
scaffold1696	subtractBed	intrn	33438	33481	.	+	.	Parent=CGI_10003675;
	scaffold1696	TRF	Tandem_Repeat	33438	33481	63	+	.	.
scaffold1697	subtractBed	intrn	12856	13024	.	+	.	Parent=CGI_10007876;
	scaffold1697	WUBlastX	LTR_Copia	12856	13128	52	+	.	.
scaffold1697	subtractBed	intrn	12620	13024	.	+	.	Parent=CGI_10007876;
	scaffold1697	WUBlastX	LTR_Gypsy-Cigr	12451	13140	41	+	.	.
scaffold1697	subtractBed	intrn	12913	13024	.	+	.	Parent=CGI_10007876;
	scaffold1697	WUBlastX	LTR_ERV1	12913	13116	53	+	.	.
scaffold1697	subtractBed	intrn	64296	64347	.	-	.	Parent=CGI_10007878;
	scaffold1697	TRF	Tandem_Repeat	64296	64347	97	+	.	.
scaffold1697	subtractBed	intrn	67270	67316	.	-	.	Parent=CGI_10007878;
	scaffold1697	TRF	Tandem_Repeat	67270	67316	69	+	.	.
scaffold1697	subtractBed	intrn	106039	106102	.	-	.	Parent=CGI_10007879;
	scaffold1697	TRF	Tandem_Repeat	106039	106102	128	+	.	.
scaffold1697	subtractBed	intrn	106096	106145	.	-	.	Parent=CGI_10007879;
	scaffold1697	TRF	Tandem_Repeat	106096	106145	93	+	.	.
scaffold1698	subtractBed	intrn	22748	22854	.	-	.	Parent=CGI_10019364;
	scaffold1698	TRF	Tandem_Repeat	22748	22854	133	+	.	.
scaffold1698	subtractBed	intrn	67272	67320	.	+	.	Parent=CGI_10019365;
	scaffold1698	TRF	Tandem_Repeat	67272	67320	89	+	.	.
scaffold1698	subtractBed	intrn	108329	108508	.	-	.	Parent=CGI_10019369;
	scaffold1698	TRF	Tandem_Repeat	108329	108508	252	+	.	.
scaffold1698	subtractBed	intrn	108329	108508	.	-	.	Parent=CGI_10019369;
	scaffold1698	TRF	Tandem_Repeat	108329	108508	252	+	.	.
scaffold1698	subtractBed	intrn	123134	123165	.	+	.	Parent=CGI_10019370;
	scaffold1698	TRF	Tandem_Repeat	123134	123165	55	+	.	.
scaffold1698	subtractBed	intrn	123380	124466	.	+	.	Parent=CGI_10019370;
	scaffold1698	TRF	Tandem_Repeat	123380	124466	1348	+	.	.
scaffold1698	subtractBed	intrn	122879	123010	.	+	.	Parent=CGI_10019370;
	scaffold1698	WUBlastX	LINE_CR1-L2	122879	123010	69	+	.	.
scaffold1698	subtractBed	intrn	122879	122986	.	+	.	Parent=CGI_10019370;
	scaffold1698	WUBlastX	LINE_CR1-L2	122879	122986	69	+	.	.
scaffold1698	subtractBed	intrn	125170	125613	.	+	.	Parent=CGI_10019370;
	scaffold1698	WUBlastX	LINE_L2	125170	125613	102	+	.	.
scaffold1698	subtractBed	intrn	125050	125613	.	+	.	Parent=CGI_10019370;
	scaffold1698	WUBlastX	LINE_CR1-L2	125050	125613	91	+	.	.
scaffold1698	subtractBed	intrn	131469	131526	.	-	.	Parent=CGI_10019371;
	scaffold1698	TRF	Tandem_Repeat	131469	131526	116	+	.	.
scaffold1698	subtractBed	intrn	271626	271707	.	-	.	Parent=CGI_10019379;
	scaffold1698	TRF	Tandem_Repeat	271626	271707	164	+	.	.
scaffold1698	subtractBed	intrn	389458	389610	.	+	.	Parent=CGI_10019385;
	scaffold1698	WUBlastX	DNA_Harbinger	389458	389610	62	+	.	.
scaffold1698	subtractBed	intrn	429484	429513	.	+	.	Parent=CGI_10019386;
	scaffold1698	TRF	Tandem_Repeat	429484	429513	60	+	.	.
scaffold1698	subtractBed	intrn	453437	453463	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	453437	453463	54	+	.	.
scaffold1698	subtractBed	intrn	453551	453584	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	453551	453584	68	+	.	.
scaffold1698	subtractBed	intrn	457366	457610	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	457366	457610	427	+	.	.
scaffold1698	subtractBed	intrn	462043	462095	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	462043	462095	88	+	.	.
scaffold1698	subtractBed	intrn	467309	467456	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	467309	467456	197	+	.	.
scaffold1698	subtractBed	intrn	467740	468119	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	467740	468119	627	+	.	.
scaffold1698	subtractBed	intrn	470294	470770	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	470294	470770	226	+	.	.
scaffold1698	subtractBed	intrn	470332	470647	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	470332	470647	120	+	.	.
scaffold1698	subtractBed	intrn	470309	470456	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	470309	470456	109	+	.	.
scaffold1698	subtractBed	intrn	470450	470684	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	470450	470684	362	+	.	.
scaffold1698	subtractBed	intrn	470567	470770	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	470567	470770	211	+	.	.
scaffold1698	subtractBed	intrn	472034	472068	.	-	.	Parent=CGI_10019387;
	scaffold1698	TRF	Tandem_Repeat	472034	472068	61	+	.	.
scaffold1698	subtractBed	intrn	480274	480530	.	+	.	Parent=CGI_10019388;
	scaffold1698	TRF	Tandem_Repeat	480274	480530	279	+	.	.
scaffold1698	subtractBed	intrn	480274	480527	.	+	.	Parent=CGI_10019388;
	scaffold1698	TRF	Tandem_Repeat	480274	480527	273	+	.	.
scaffold1698	subtractBed	intrn	482863	483685	.	+	.	Parent=CGI_10019388;
	scaffold1698	TRF	Tandem_Repeat	482863	483685	928	+	.	.
scaffold1698	subtractBed	intrn	486281	486768	.	+	.	Parent=CGI_10019388;
	scaffold1698	TRF	Tandem_Repeat	486281	486768	442	+	.	.
scaffold1698	subtractBed	intrn	504807	504966	.	+	.	Parent=CGI_10019389;
	scaffold1698	TRF	Tandem_Repeat	504807	504966	212	+	.	.
scaffold1698	subtractBed	intrn	504784	504966	.	+	.	Parent=CGI_10019389;
	scaffold1698	TRF	Tandem_Repeat	504784	504966	296	+	.	.
scaffold1698	subtractBed	intrn	505533	505578	.	+	.	Parent=CGI_10019389;
	scaffold1698	TRF	Tandem_Repeat	505533	505578	92	+	.	.
scaffold1698	subtractBed	intrn	510885	510927	.	+	.	Parent=CGI_10019389;
	scaffold1698	TRF	Tandem_Repeat	510885	510927	86	+	.	.
scaffold1698	subtractBed	intrn	509319	509702	.	+	.	Parent=CGI_10019389;
	scaffold1698	WUBlastX	DNA_Sola	509319	509702	47	+	.	.
scaffold1698	subtractBed	intrn	510429	510563	.	+	.	Parent=CGI_10019389;
	scaffold1698	WUBlastX	DNA_Sola	510429	510563	30	+	.	.
scaffold1698	subtractBed	intrn	509685	509828	.	+	.	Parent=CGI_10019389;
	scaffold1698	WUBlastX	DNA_Sola	509685	509828	68	+	.	.
scaffold1698	subtractBed	intrn	518164	518280	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	518164	518280	92	+	.	.
scaffold1698	subtractBed	intrn	518413	518638	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	518413	518638	136	+	.	.
scaffold1698	subtractBed	intrn	518453	518649	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	518453	518649	218	+	.	.
scaffold1698	subtractBed	intrn	525768	525823	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	525768	525823	112	+	.	.
scaffold1698	subtractBed	intrn	527338	527442	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	527338	527442	93	+	.	.
scaffold1698	subtractBed	intrn	524181	524297	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	524181	524297	171	+	.	.
scaffold1698	subtractBed	intrn	524184	524311	.	+	.	Parent=CGI_10019390;
	scaffold1698	TRF	Tandem_Repeat	524184	524311	143	+	.	.
scaffold1698	subtractBed	intrn	540817	541564	.	+	.	Parent=CGI_10019391;
	scaffold1698	TRF	Tandem_Repeat	540817	541564	912	+	.	.
scaffold1698	subtractBed	intrn	555219	556096	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_RTE-X	555188	556096	57	+	.	.
scaffold1698	subtractBed	intrn	556465	556584	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_RTE-X	556465	556584	22	+	.	.
scaffold1698	subtractBed	intrn	556620	556757	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_RTE-X	556620	556757	43	+	.	.
scaffold1698	subtractBed	intrn	556772	557020	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_RTE-X	556772	557020	27	+	.	.
scaffold1698	subtractBed	intrn	555503	556090	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_RTE-X	555503	556090	67	+	.	.
scaffold1698	subtractBed	intrn	558800	559120	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_Penelope	558800	559120	82	-	.	.
scaffold1698	subtractBed	intrn	558782	559057	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_Penelope	558782	559057	83	-	.	.
scaffold1698	subtractBed	intrn	558674	559171	.	-	.	Parent=CGI_10019393;
	scaffold1698	WUBlastX	LINE_Penelope	558674	559171	59	-	.	.
scaffold170	subtractBed	intrn	17169	17201	.	+	.	Parent=CGI_10007430;
	scaffold170	TRF	Tandem_Repeat	17169	17201	57	+	.	.
scaffold170	subtractBed	intrn	17520	18370	.	+	.	Parent=CGI_10007430;
	scaffold170	TRF	Tandem_Repeat	17520	18370	1341	+	.	.
scaffold170	subtractBed	intrn	25731	25788	.	+	.	Parent=CGI_10007430;
	scaffold170	TRF	Tandem_Repeat	25731	25788	98	+	.	.
scaffold170	subtractBed	intrn	57872	57918	.	-	.	Parent=CGI_10007431;
	scaffold170	TRF	Tandem_Repeat	57872	57918	94	+	.	.
scaffold170	subtractBed	intrn	69821	69849	.	-	.	Parent=CGI_10007431;
	scaffold170	TRF	Tandem_Repeat	69821	69849	58	+	.	.
scaffold170	subtractBed	intrn	71601	71653	.	-	.	Parent=CGI_10007431;
	scaffold170	TRF	Tandem_Repeat	71601	71653	61	+	.	.
scaffold170	subtractBed	intrn	69493	69495	.	-	.	Parent=CGI_10007431;
	scaffold170	WUBlastX	DNA_MuDR	69232	69495	58	-	.	.
scaffold170	subtractBed	intrn	84920	85047	.	-	.	Parent=CGI_10007434;
	scaffold170	TRF	Tandem_Repeat	84920	85047	114	+	.	.
scaffold170	subtractBed	intrn	84974	85097	.	-	.	Parent=CGI_10007434;
	scaffold170	TRF	Tandem_Repeat	84974	85097	73	+	.	.
scaffold1700	subtractBed	intrn	7783	7992	.	+	.	Parent=CGI_10012800;
	scaffold1700	WUBlastX	DNA_Academ	7783	7992	77	+	.	.
scaffold1700	subtractBed	intrn	8019	8993	.	+	.	Parent=CGI_10012800;
	scaffold1700	WUBlastX	DNA_Academ	8019	8993	354	+	.	.
scaffold1700	subtractBed	intrn	8947	9732	.	+	.	Parent=CGI_10012800;
	scaffold1700	WUBlastX	DNA_Academ	8947	9732	390	+	.	.
scaffold1700	subtractBed	intrn	119273	120175	.	-	.	Parent=CGI_10012802;
	scaffold1700	TRF	Tandem_Repeat	119273	120175	1455	+	.	.
scaffold1700	subtractBed	intrn	156953	157019	.	-	.	Parent=CGI_10012804;
	scaffold1700	TRF	Tandem_Repeat	156953	157019	59	+	.	.
scaffold1700	subtractBed	intrn	298807	298847	.	+	.	Parent=CGI_10012809;
	scaffold1700	TRF	Tandem_Repeat	298807	298847	50	+	.	.
scaffold1700	subtractBed	intrn	299021	299978	.	+	.	Parent=CGI_10012809;
	scaffold1700	TRF	Tandem_Repeat	299021	299978	1152	+	.	.
scaffold1700	subtractBed	intrn	318565	318614	.	-	.	Parent=CGI_10012812;
	scaffold1700	TRF	Tandem_Repeat	318565	318614	100	+	.	.
scaffold1700	subtractBed	intrn	320826	320850	.	-	.	Parent=CGI_10012812;
	scaffold1700	TRF	Tandem_Repeat	320826	320850	50	+	.	.
scaffold1701	subtractBed	intrn	2556	2624	.	-	.	Parent=CGI_10002843;
	scaffold1701	TRF	Tandem_Repeat	2556	2624	131	+	.	.
scaffold1703	subtractBed	intrn	68688	68732	.	-	.	Parent=CGI_10023038;
	scaffold1703	TRF	Tandem_Repeat	68688	68732	90	+	.	.
scaffold1703	subtractBed	intrn	89095	89149	.	+	.	Parent=CGI_10023040;
	scaffold1703	TRF	Tandem_Repeat	89095	89149	101	+	.	.
scaffold1703	subtractBed	intrn	90919	91095	.	+	.	Parent=CGI_10023040;
	scaffold1703	WUBlastX	DNA_PiggyBac	90919	91095	84	+	.	.
scaffold1703	subtractBed	intrn	92389	93513	.	+	.	Parent=CGI_10023040;
	scaffold1703	WUBlastX	DNA_PiggyBac	92389	93513	516	+	.	.
scaffold1703	subtractBed	intrn	91610	91711	.	+	.	Parent=CGI_10023040;
	scaffold1703	WUBlastX	DNA_PiggyBac	91610	91711	29	+	.	.
scaffold1703	subtractBed	intrn	92278	92952	.	+	.	Parent=CGI_10023040;
	scaffold1703	WUBlastX	DNA_PiggyBac	92278	92952	100	+	.	.
scaffold1703	subtractBed	intrn	91646	91822	.	+	.	Parent=CGI_10023040;
	scaffold1703	WUBlastX	DNA_PiggyBac	91646	91822	61	+	.	.
scaffold1703	subtractBed	intrn	112763	112792	.	-	.	Parent=CGI_10023041;
	scaffold1703	TRF	Tandem_Repeat	112763	112792	51	+	.	.
scaffold1703	subtractBed	intrn	123491	124082	.	-	.	Parent=CGI_10023041;
	scaffold1703	TRF	Tandem_Repeat	123491	124082	1060	+	.	.
scaffold1703	subtractBed	intrn	141955	141988	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	141955	141988	59	+	.	.
scaffold1703	subtractBed	intrn	141962	142012	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	141962	142012	57	+	.	.
scaffold1703	subtractBed	intrn	141958	142008	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	141958	142008	66	+	.	.
scaffold1703	subtractBed	intrn	141955	142004	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	141955	142004	73	+	.	.
scaffold1703	subtractBed	intrn	145793	146590	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	145793	146590	961	+	.	.
scaffold1703	subtractBed	intrn	145793	146589	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	145793	146589	958	+	.	.
scaffold1703	subtractBed	intrn	142539	143264	.	-	.	Parent=CGI_10023043;
	scaffold1703	WUBlastX	LINE_RTE-X	142539	143264	91	+	.	.
scaffold1703	subtractBed	intrn	147142	147819	.	-	.	Parent=CGI_10023043;
	scaffold1703	TRF	Tandem_Repeat	147142	147819	811	+	.	.
scaffold1703	subtractBed	intrn	195440	195577	.	+	.	Parent=CGI_10023047;
	scaffold1703	WUBlastX	LINE_L2	195440	195577	38	+	.	.
scaffold1703	subtractBed	intrn	221230	221904	.	+	.	Parent=CGI_10023049;
	scaffold1703	WUBlastX	DNA_Maverick	221230	221904	393	-	.	.
scaffold1703	subtractBed	intrn	221083	222003	.	+	.	Parent=CGI_10023049;
	scaffold1703	WUBlastX	DNA_Maverick	221083	222003	273	-	.	.
scaffold1703	subtractBed	intrn	222264	223553	.	+	.	Parent=CGI_10023049;
	scaffold1703	WUBlastX	DNA_Maverick	222264	223553	140	-	.	.
scaffold1703	subtractBed	intrn	220849	221073	.	+	.	Parent=CGI_10023049;
	scaffold1703	WUBlastX	DNA_Maverick	220849	221073	86	-	.	.
scaffold1703	subtractBed	intrn	222114	222893	.	+	.	Parent=CGI_10023049;
	scaffold1703	WUBlastX	DNA_Maverick	222114	222893	59	-	.	.
scaffold1703	subtractBed	intrn	227427	228517	.	+	.	Parent=CGI_10023049;
	scaffold1703	TRF	Tandem_Repeat	227427	228517	1740	+	.	.
scaffold1703	subtractBed	intrn	227427	228517	.	+	.	Parent=CGI_10023049;
	scaffold1703	TRF	Tandem_Repeat	227427	228517	1677	+	.	.
scaffold1703	subtractBed	intrn	229151	229180	.	+	.	Parent=CGI_10023049;
	scaffold1703	TRF	Tandem_Repeat	229151	229180	51	+	.	.
scaffold1703	subtractBed	intrn	233313	233442	.	+	.	Parent=CGI_10023049;
	scaffold1703	TRF	Tandem_Repeat	233313	233442	176	+	.	.
scaffold1703	subtractBed	intrn	358670	358712	.	+	.	Parent=CGI_10023054;
	scaffold1703	TRF	Tandem_Repeat	358670	358712	77	+	.	.
scaffold1703	subtractBed	intrn	364232	364371	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	364232	364371	135	+	.	.
scaffold1703	subtractBed	intrn	369413	369641	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	369413	369641	213	+	.	.
scaffold1703	subtractBed	intrn	369524	369635	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	369524	369635	107	+	.	.
scaffold1703	subtractBed	intrn	369417	369639	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	369417	369639	245	+	.	.
scaffold1703	subtractBed	intrn	371817	371904	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	371817	371904	167	+	.	.
scaffold1703	subtractBed	intrn	371995	372166	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	371995	372166	299	+	.	.
scaffold1703	subtractBed	intrn	374232	374584	.	-	.	Parent=CGI_10023055;
	scaffold1703	TRF	Tandem_Repeat	374232	374584	625	+	.	.
scaffold1703	subtractBed	intrn	391391	391472	.	+	.	Parent=CGI_10023057;
	scaffold1703	TRF	Tandem_Repeat	391391	391472	164	+	.	.
scaffold1703	subtractBed	intrn	412340	412425	.	-	.	Parent=CGI_10023058;
	scaffold1703	TRF	Tandem_Repeat	412340	412425	154	+	.	.
scaffold1703	subtractBed	intrn	415346	415566	.	-	.	Parent=CGI_10023058;
	scaffold1703	TRF	Tandem_Repeat	415346	415566	293	+	.	.
scaffold1703	subtractBed	intrn	419399	419611	.	-	.	Parent=CGI_10023058;
	scaffold1703	WUBlastX	LINE_RTE-BovB	419399	419611	68	+	.	.
scaffold1703	subtractBed	intrn	418737	419051	.	-	.	Parent=CGI_10023058;
	scaffold1703	WUBlastX	LINE_RTE-BovB	418737	419051	76	+	.	.
scaffold1703	subtractBed	intrn	466865	467620	.	-	.	Parent=CGI_10023062;
	scaffold1703	WUBlastX	LINE_L1-Tx1	466865	467620	149	+	.	.
scaffold1703	subtractBed	intrn	472323	472892	.	-	.	Parent=CGI_10023062;
	scaffold1703	WUBlastX	LINE_RTE-X	472323	472892	181	+	.	.
scaffold1703	subtractBed	intrn	467592	470261	.	-	.	Parent=CGI_10023062;
	scaffold1703	WUBlastX	LINE_L1-Tx1	467592	470261	878	+	.	.
scaffold1703	subtractBed	intrn	491056	491101	.	+	.	Parent=CGI_10023063;
	scaffold1703	TRF	Tandem_Repeat	491056	491101	92	+	.	.
scaffold1703	subtractBed	intrn	495722	495789	.	+	.	Parent=CGI_10023063;
	scaffold1703	TRF	Tandem_Repeat	495722	495789	109	+	.	.
scaffold1703	subtractBed	intrn	495788	495849	.	+	.	Parent=CGI_10023063;
	scaffold1703	TRF	Tandem_Repeat	495788	495849	124	+	.	.
scaffold1703	subtractBed	intrn	507590	507923	.	-	.	Parent=CGI_10023064;
	scaffold1703	TRF	Tandem_Repeat	507590	507968	501	+	.	.
scaffold1703	subtractBed	intrn	519145	519191	.	+	.	Parent=CGI_10023065;
	scaffold1703	TRF	Tandem_Repeat	519145	519191	94	+	.	.
scaffold1703	subtractBed	intrn	535909	535939	.	-	.	Parent=CGI_10023066;
	scaffold1703	TRF	Tandem_Repeat	535909	535939	62	+	.	.
scaffold1703	subtractBed	intrn	552222	552252	.	-	.	Parent=CGI_10023066;
	scaffold1703	TRF	Tandem_Repeat	552222	552252	53	+	.	.
scaffold1703	subtractBed	intrn	595000	595578	.	+	.	Parent=CGI_10023068;
	scaffold1703	TRF	Tandem_Repeat	595000	595578	838	+	.	.
scaffold1703	subtractBed	intrn	597499	597888	.	+	.	Parent=CGI_10023068;
	scaffold1703	TRF	Tandem_Repeat	597499	597888	352	+	.	.
scaffold1703	subtractBed	intrn	603846	603880	.	+	.	Parent=CGI_10023068;
	scaffold1703	TRF	Tandem_Repeat	603846	603880	52	+	.	.
scaffold1703	subtractBed	intrn	629798	629853	.	+	.	Parent=CGI_10023071;
	scaffold1703	TRF	Tandem_Repeat	629798	629853	112	+	.	.
scaffold1703	subtractBed	intrn	667329	670481	.	-	.	Parent=CGI_10023072;
	scaffold1703	WUBlastX	LTR_Gypsy	667329	670481	2596	+	.	.
scaffold1703	subtractBed	intrn	669372	671030	.	-	.	Parent=CGI_10023072;
	scaffold1703	WUBlastX	LTR_Gypsy	669372	671030	402	+	.	.
scaffold1703	subtractBed	intrn	666972	670733	.	-	.	Parent=CGI_10023072;
	scaffold1703	WUBlastX	LTR_Gypsy	666972	670733	1478	+	.	.
scaffold1704	subtractBed	intrn	14857	14893	.	+	.	Parent=CGI_10010159;
	scaffold1704	TRF	Tandem_Repeat	14857	14893	51	+	.	.
scaffold1704	subtractBed	intrn	23237	25032	.	+	.	Parent=CGI_10010159;
	scaffold1704	TRF	Tandem_Repeat	23237	25032	1477	+	.	.
scaffold1704	subtractBed	intrn	26672	26891	.	+	.	Parent=CGI_10010159;
	scaffold1704	WUBlastX	LTR_Gypsy	26672	26989	61	+	.	.
scaffold1704	subtractBed	intrn	26621	26891	.	+	.	Parent=CGI_10010159;
	scaffold1704	WUBlastX	LTR_Gypsy	26621	27079	52	+	.	.
scaffold1704	subtractBed	intrn	36210	37103	.	-	.	Parent=CGI_10010162;
	scaffold1704	WUBlastX	LINE_RTE-X	36210	37103	146	+	.	.
scaffold1704	subtractBed	intrn	39455	40327	.	-	.	Parent=CGI_10010162;
	scaffold1704	WUBlastX	LINE_RTE-X	39455	40327	235	-	.	.
scaffold1704	subtractBed	intrn	40733	40843	.	-	.	Parent=CGI_10010162;
	scaffold1704	WUBlastX	LINE_RTE-X	40733	40843	34	-	.	.
scaffold1704	subtractBed	intrn	67009	67542	.	+	.	Parent=CGI_10010165;
	scaffold1704	TRF	Tandem_Repeat	67009	67542	203	+	.	.
scaffold1704	subtractBed	intrn	67052	67542	.	+	.	Parent=CGI_10010165;
	scaffold1704	TRF	Tandem_Repeat	67052	67542	387	+	.	.
scaffold1704	subtractBed	intrn	67052	67542	.	+	.	Parent=CGI_10010165;
	scaffold1704	TRF	Tandem_Repeat	67052	67542	423	+	.	.
scaffold1704	subtractBed	intrn	67009	67542	.	-	.	Parent=CGI_10010166;
	scaffold1704	TRF	Tandem_Repeat	67009	67542	203	+	.	.
scaffold1704	subtractBed	intrn	67052	67542	.	-	.	Parent=CGI_10010166;
	scaffold1704	TRF	Tandem_Repeat	67052	67542	387	+	.	.
scaffold1704	subtractBed	intrn	67052	67542	.	-	.	Parent=CGI_10010166;
	scaffold1704	TRF	Tandem_Repeat	67052	67542	423	+	.	.
scaffold1704	subtractBed	intrn	80132	80300	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	80132	80300	218	+	.	.
scaffold1704	subtractBed	intrn	80511	80606	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	80511	80606	51	+	.	.
scaffold1704	subtractBed	intrn	81369	81546	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	81369	81546	109	+	.	.
scaffold1704	subtractBed	intrn	82067	82289	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	82067	82289	149	+	.	.
scaffold1704	subtractBed	intrn	81231	82269	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	81231	82269	852	+	.	.
scaffold1704	subtractBed	intrn	81677	82269	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	81677	82269	656	+	.	.
scaffold1704	subtractBed	intrn	92130	92242	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	92130	92242	190	+	.	.
scaffold1704	subtractBed	intrn	94944	95006	.	-	.	Parent=CGI_10010167;
	scaffold1704	TRF	Tandem_Repeat	94944	95006	108	+	.	.
scaffold1704	subtractBed	intrn	133095	133709	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	DNA_Crypton	133095	133709	117	+	.	.
scaffold1704	subtractBed	intrn	133428	133763	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	DNA_Crypton	133428	133763	89	+	.	.
scaffold1704	subtractBed	intrn	134757	134797	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	134757	134797	82	+	.	.
scaffold1704	subtractBed	intrn	136510	136548	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	136510	136548	51	+	.	.
scaffold1704	subtractBed	intrn	139841	140076	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	139841	140076	400	+	.	.
scaffold1704	subtractBed	intrn	141215	141340	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	141215	141340	110	+	.	.
scaffold1704	subtractBed	intrn	145045	145592	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	145045	145592	581	+	.	.
scaffold1704	subtractBed	intrn	147149	147413	.	+	.	Parent=CGI_10010170;
	scaffold1704	TRF	Tandem_Repeat	147149	147413	268	+	.	.
scaffold1704	subtractBed	intrn	149781	150182	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	LINE_RTE-X	149781	150182	158	+	.	.
scaffold1704	subtractBed	intrn	148939	149178	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	LINE_RTE-X	148939	149178	29	+	.	.
scaffold1704	subtractBed	intrn	149017	149574	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	LINE_RTE-X	149017	149574	37	+	.	.
scaffold1704	subtractBed	intrn	149673	150116	.	+	.	Parent=CGI_10010170;
	scaffold1704	WUBlastX	LINE_RTE-X	149673	150116	94	+	.	.
scaffold1704	subtractBed	intrn	207174	207209	.	-	.	Parent=CGI_10010173;
	scaffold1704	TRF	Tandem_Repeat	207174	207209	56	+	.	.
scaffold1704	subtractBed	intrn	210756	211148	.	-	.	Parent=CGI_10010173;
	scaffold1704	TRF	Tandem_Repeat	210756	211148	488	+	.	.
scaffold1704	subtractBed	intrn	238614	238657	.	+	.	Parent=CGI_10010174;
	scaffold1704	TRF	Tandem_Repeat	238614	238657	88	+	.	.
scaffold1704	subtractBed	intrn	241164	241462	.	+	.	Parent=CGI_10010174;
	scaffold1704	TRF	Tandem_Repeat	241164	241462	482	+	.	.
scaffold1704	subtractBed	intrn	244102	244240	.	+	.	Parent=CGI_10010174;
	scaffold1704	TRF	Tandem_Repeat	244102	244240	208	+	.	.
scaffold1705	subtractBed	intrn	18915	18997	.	+	.	Parent=CGI_10007464;
	scaffold1705	TRF	Tandem_Repeat	18915	18997	166	+	.	.
scaffold1705	subtractBed	intrn	23664	23718	.	+	.	Parent=CGI_10007464;
	scaffold1705	TRF	Tandem_Repeat	23664	23718	110	+	.	.
scaffold1705	subtractBed	intrn	25469	25510	.	+	.	Parent=CGI_10007464;
	scaffold1705	TRF	Tandem_Repeat	25469	25510	84	+	.	.
scaffold1705	subtractBed	intrn	39217	39467	.	-	.	Parent=CGI_10007465;
	scaffold1705	TRF	Tandem_Repeat	39217	39467	430	+	.	.
scaffold1705	subtractBed	intrn	41958	41989	.	-	.	Parent=CGI_10007466;
	scaffold1705	TRF	Tandem_Repeat	41958	41989	64	+	.	.
scaffold1705	subtractBed	intrn	42543	42750	.	-	.	Parent=CGI_10007466;
	scaffold1705	TRF	Tandem_Repeat	42543	42750	134	+	.	.
scaffold1705	subtractBed	intrn	62370	62443	.	-	.	Parent=CGI_10007467;
	scaffold1705	TRF	Tandem_Repeat	62370	62443	59	+	.	.
scaffold1705	subtractBed	intrn	70519	70571	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	70519	70571	97	+	.	.
scaffold1705	subtractBed	intrn	72724	72755	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	72724	72755	64	+	.	.
scaffold1705	subtractBed	intrn	80165	83153	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	80165	83153	3661	+	.	.
scaffold1705	subtractBed	intrn	86998	87053	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	86998	87053	112	+	.	.
scaffold1705	subtractBed	intrn	87193	87283	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	87193	87283	182	+	.	.
scaffold1705	subtractBed	intrn	94478	95860	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	94478	95860	94	-	.	.
scaffold1705	subtractBed	intrn	91115	92638	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy-Cigr	91115	92638	822	-	.	.
scaffold1705	subtractBed	intrn	91067	91141	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Copia	91067	91141	20	-	.	.
scaffold1705	subtractBed	intrn	95273	95989	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	95273	95989	46	-	.	.
scaffold1705	subtractBed	intrn	94904	95674	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	94904	95674	171	-	.	.
scaffold1705	subtractBed	intrn	96786	98054	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy-Cigr	96786	98054	712	+	.	.
scaffold1705	subtractBed	intrn	96747	96947	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	96747	96947	72	+	.	.
scaffold1705	subtractBed	intrn	91481	94249	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	91481	94249	2036	-	.	.
scaffold1705	subtractBed	intrn	91376	94810	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	91376	94810	1925	-	.	.
scaffold1705	subtractBed	intrn	97738	98613	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy	97738	98613	89	+	.	.
scaffold1705	subtractBed	intrn	98101	98499	.	+	.	Parent=CGI_10007468;
	scaffold1705	WUBlastX	LTR_Gypsy-Cigr	98101	98499	166	+	.	.
scaffold1705	subtractBed	intrn	99602	99725	.	+	.	Parent=CGI_10007468;
	scaffold1705	TRF	Tandem_Repeat	99602	99725	81	+	.	.
scaffold1705	subtractBed	intrn	72724	72755	.	-	.	Parent=CGI_10007469;
	scaffold1705	TRF	Tandem_Repeat	72724	72755	64	+	.	.
scaffold1705	subtractBed	intrn	166679	166714	.	+	.	Parent=CGI_10007473;
	scaffold1705	TRF	Tandem_Repeat	166679	166714	54	+	.	.
scaffold1705	subtractBed	intrn	177890	178086	.	-	.	Parent=CGI_10007474;
	scaffold1705	WUBlastX	LINE_RTE-BovB	177890	178147	79	+	.	.
scaffold1706	subtractBed	intrn	37904	38050	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	DNA_Kolobok	37817	38050	78	-	.	.
scaffold1706	subtractBed	intrn	37904	37981	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	DNA_Kolobok	37769	37981	93	-	.	.
scaffold1706	subtractBed	intrn	46991	47521	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1	46991	47521	29	+	.	.
scaffold1706	subtractBed	intrn	45846	46556	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1	45846	46556	71	+	.	.
scaffold1706	subtractBed	intrn	46645	46788	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1	46645	46788	35	+	.	.
scaffold1706	subtractBed	intrn	45618	46463	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1-Tx1	45618	46463	66	+	.	.
scaffold1706	subtractBed	intrn	45834	46430	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1-Tx1	45834	46430	261	+	.	.
scaffold1706	subtractBed	intrn	47066	47497	.	-	.	Parent=CGI_10003662;
	scaffold1706	WUBlastX	LINE_L1-Tx1	47066	47497	94	+	.	.
scaffold1706	subtractBed	intrn	53949	54023	.	-	.	Parent=CGI_10003662;
	scaffold1706	TRF	Tandem_Repeat	53949	54023	51	+	.	.
scaffold1706	subtractBed	intrn	53970	53999	.	-	.	Parent=CGI_10003662;
	scaffold1706	TRF	Tandem_Repeat	53970	53999	51	+	.	.
scaffold1707	subtractBed	intrn	26313	26392	.	+	.	Parent=CGI_10009947;
	scaffold1707	TRF	Tandem_Repeat	26313	26392	133	+	.	.
scaffold1707	subtractBed	intrn	28234	28363	.	+	.	Parent=CGI_10009947;
	scaffold1707	TRF	Tandem_Repeat	28234	28363	113	+	.	.
scaffold1707	subtractBed	intrn	28234	28363	.	+	.	Parent=CGI_10009947;
	scaffold1707	TRF	Tandem_Repeat	28234	28363	129	+	.	.
scaffold1707	subtractBed	intrn	41538	41595	.	+	.	Parent=CGI_10009947;
	scaffold1707	TRF	Tandem_Repeat	41538	41595	93	+	.	.
scaffold1707	subtractBed	intrn	133589	133616	.	-	.	Parent=CGI_10009952;
	scaffold1707	TRF	Tandem_Repeat	133589	133616	56	+	.	.
scaffold1708	subtractBed	intrn	6969	8450	.	+	.	Parent=CGI_10005574;
	scaffold1708	WUBlastX	LINE_CR1-L2	6969	8450	258	-	.	.
scaffold1708	subtractBed	intrn	6895	6993	.	+	.	Parent=CGI_10005574;
	scaffold1708	WUBlastX	LINE_L2	6895	6993	47	-	.	.
scaffold1708	subtractBed	intrn	8613	8825	.	+	.	Parent=CGI_10005574;
	scaffold1708	WUBlastX	LINE_L2	8613	8837	70	-	.	.
scaffold1708	subtractBed	intrn	6990	8234	.	+	.	Parent=CGI_10005574;
	scaffold1708	WUBlastX	LINE_L2	6990	8234	833	-	.	.
scaffold1708	subtractBed	intrn	6993	8771	.	+	.	Parent=CGI_10005574;
	scaffold1708	WUBlastX	LINE_L2	6993	8771	233	-	.	.
scaffold1708	subtractBed	intrn	27308	27347	.	+	.	Parent=CGI_10005577;
	scaffold1708	TRF	Tandem_Repeat	27308	27347	53	+	.	.
scaffold1710	subtractBed	intrn	73914	73959	.	+	.	Parent=CGI_10022336;
	scaffold1710	TRF	Tandem_Repeat	73914	73959	92	+	.	.
scaffold1710	subtractBed	intrn	96011	96066	.	+	.	Parent=CGI_10022338;
	scaffold1710	TRF	Tandem_Repeat	96011	96066	51	+	.	.
scaffold1710	subtractBed	intrn	136229	136336	.	-	.	Parent=CGI_10022342;
	scaffold1710	WUBlastX	LINE_L1-Tx1	136229	136336	24	-	.	.
scaffold1710	subtractBed	intrn	136330	136929	.	-	.	Parent=CGI_10022342;
	scaffold1710	WUBlastX	LINE_L1-Tx1	136330	136929	297	-	.	.
scaffold1710	subtractBed	intrn	142789	143387	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	142789	143387	733	+	.	.
scaffold1710	subtractBed	intrn	145010	145063	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	145010	145063	108	+	.	.
scaffold1710	subtractBed	intrn	145061	145099	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	145061	145099	78	+	.	.
scaffold1710	subtractBed	intrn	145202	145248	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	145202	145248	87	+	.	.
scaffold1710	subtractBed	intrn	145246	145281	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	145246	145281	72	+	.	.
scaffold1710	subtractBed	intrn	149725	149809	.	-	.	Parent=CGI_10022343;
	scaffold1710	TRF	Tandem_Repeat	149725	149809	120	+	.	.
scaffold1710	subtractBed	intrn	158810	158992	.	-	.	Parent=CGI_10022344;
	scaffold1710	TRF	Tandem_Repeat	158810	158992	176	+	.	.
scaffold1710	subtractBed	intrn	161512	161543	.	-	.	Parent=CGI_10022344;
	scaffold1710	TRF	Tandem_Repeat	161512	161543	64	+	.	.
scaffold1710	subtractBed	intrn	216207	216689	.	-	.	Parent=CGI_10022347;
	scaffold1710	WUBlastX	LINE_RTE-X	216207	216689	82	-	.	.
scaffold1710	subtractBed	intrn	216207	216812	.	-	.	Parent=CGI_10022347;
	scaffold1710	WUBlastX	LINE_RTE-X	216207	216812	24	-	.	.
scaffold1710	subtractBed	intrn	227253	227502	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	227253	227502	215	+	.	.
scaffold1710	subtractBed	intrn	229472	229511	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	229472	229511	53	+	.	.
scaffold1710	subtractBed	intrn	229481	229523	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	229481	229523	50	+	.	.
scaffold1710	subtractBed	intrn	233736	233782	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	233736	233782	51	+	.	.
scaffold1710	subtractBed	intrn	239743	242075	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	239743	242075	4016	+	.	.
scaffold1710	subtractBed	intrn	243583	244041	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	243583	244041	792	+	.	.
scaffold1710	subtractBed	intrn	244945	245068	.	+	.	Parent=CGI_10022348;
	scaffold1710	TRF	Tandem_Repeat	244945	245068	194	+	.	.
scaffold1710	subtractBed	intrn	258912	258963	.	+	.	Parent=CGI_10022349;
	scaffold1710	TRF	Tandem_Repeat	258912	258963	86	+	.	.
scaffold1710	subtractBed	intrn	259051	259087	.	+	.	Parent=CGI_10022349;
	scaffold1710	TRF	Tandem_Repeat	259051	259087	60	+	.	.
scaffold1710	subtractBed	intrn	260982	261017	.	+	.	Parent=CGI_10022349;
	scaffold1710	TRF	Tandem_Repeat	260982	261017	63	+	.	.
scaffold1710	subtractBed	intrn	266234	266471	.	+	.	Parent=CGI_10022349;
	scaffold1710	TRF	Tandem_Repeat	266234	266484	261	+	.	.
scaffold1710	subtractBed	intrn	277530	277579	.	-	.	Parent=CGI_10022351;
	scaffold1710	TRF	Tandem_Repeat	277530	277579	100	+	.	.
scaffold1710	subtractBed	intrn	278700	278725	.	-	.	Parent=CGI_10022351;
	scaffold1710	TRF	Tandem_Repeat	278700	278725	52	+	.	.
scaffold1710	subtractBed	intrn	335372	336128	.	+	.	Parent=CGI_10022355;
	scaffold1710	TRF	Tandem_Repeat	335372	336128	1051	+	.	.
scaffold1710	subtractBed	intrn	364984	365028	.	+	.	Parent=CGI_10022355;
	scaffold1710	TRF	Tandem_Repeat	364984	365028	90	+	.	.
scaffold1710	subtractBed	intrn	365128	365241	.	+	.	Parent=CGI_10022355;
	scaffold1710	TRF	Tandem_Repeat	365128	365241	189	+	.	.
scaffold1710	subtractBed	intrn	383472	383512	.	-	.	Parent=CGI_10022361;
	scaffold1710	TRF	Tandem_Repeat	383472	383512	82	+	.	.
scaffold1710	subtractBed	intrn	507045	507090	.	+	.	Parent=CGI_10022368;
	scaffold1710	TRF	Tandem_Repeat	507045	507090	83	+	.	.
scaffold1710	subtractBed	intrn	517638	517685	.	+	.	Parent=CGI_10022368;
	scaffold1710	TRF	Tandem_Repeat	517638	517685	87	+	.	.
scaffold1710	subtractBed	intrn	526533	528114	.	+	.	Parent=CGI_10022368;
	scaffold1710	TRF	Tandem_Repeat	526533	528114	2273	+	.	.
scaffold1710	subtractBed	intrn	529058	529204	.	+	.	Parent=CGI_10022368;
	scaffold1710	TRF	Tandem_Repeat	529058	529204	73	+	.	.
scaffold1710	subtractBed	intrn	529120	529249	.	+	.	Parent=CGI_10022368;
	scaffold1710	TRF	Tandem_Repeat	529120	529249	93	+	.	.
scaffold1710	subtractBed	intrn	611596	611638	.	+	.	Parent=CGI_10022372;
	scaffold1710	TRF	Tandem_Repeat	611596	611638	59	+	.	.
scaffold1710	subtractBed	intrn	625600	625630	.	+	.	Parent=CGI_10022372;
	scaffold1710	TRF	Tandem_Repeat	625600	625630	62	+	.	.
scaffold1710	subtractBed	intrn	647420	647478	.	+	.	Parent=CGI_10022372;
	scaffold1710	TRF	Tandem_Repeat	647420	647478	109	+	.	.
scaffold1710	subtractBed	intrn	649295	649355	.	+	.	Parent=CGI_10022372;
	scaffold1710	TRF	Tandem_Repeat	649295	649355	122	+	.	.
scaffold1710	subtractBed	intrn	695524	695555	.	+	.	Parent=CGI_10022372;
	scaffold1710	TRF	Tandem_Repeat	695524	695555	64	+	.	.
scaffold1710	subtractBed	intrn	716752	716857	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	716752	716857	194	+	.	.
scaffold1710	subtractBed	intrn	716855	716941	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	716855	716941	174	+	.	.
scaffold1710	subtractBed	intrn	719013	719351	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719013	719351	309	+	.	.
scaffold1710	subtractBed	intrn	719004	719450	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719004	719450	352	+	.	.
scaffold1710	subtractBed	intrn	719019	719450	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719019	719450	376	+	.	.
scaffold1710	subtractBed	intrn	719283	719380	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719283	719380	99	+	.	.
scaffold1710	subtractBed	intrn	719013	719450	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719013	719450	234	+	.	.
scaffold1710	subtractBed	intrn	719404	719462	.	-	.	Parent=CGI_10022373;
	scaffold1710	TRF	Tandem_Repeat	719404	719462	61	+	.	.
scaffold1710	subtractBed	intrn	723110	723217	.	-	.	Parent=CGI_10022373;
	scaffold1710	WUBlastX	LINE_R2-Hero	723110	723217	72	+	.	.
scaffold1710	subtractBed	intrn	723229	723381	.	-	.	Parent=CGI_10022373;
	scaffold1710	WUBlastX	LINE_R2-Hero	723229	723381	45	+	.	.
scaffold1711	subtractBed	intrn	19560	19591	.	+	.	Parent=CGI_10015595;
	scaffold1711	TRF	Tandem_Repeat	19560	19591	64	+	.	.
scaffold1711	subtractBed	intrn	23210	23452	.	+	.	Parent=CGI_10015595;
	scaffold1711	WUBlastX	LINE_RTE-X	23210	23452	55	+	.	.
scaffold1711	subtractBed	intrn	23183	23524	.	+	.	Parent=CGI_10015595;
	scaffold1711	WUBlastX	LINE_RTE-X	23183	23524	32	+	.	.
scaffold1711	subtractBed	intrn	46825	47166	.	-	.	Parent=CGI_10015598;
	scaffold1711	TRF	Tandem_Repeat	46825	47166	549	+	.	.
scaffold1711	subtractBed	intrn	47844	48158	.	-	.	Parent=CGI_10015598;
	scaffold1711	TRF	Tandem_Repeat	47844	48158	531	+	.	.
scaffold1711	subtractBed	intrn	69855	69976	.	+	.	Parent=CGI_10015600;
	scaffold1711	TRF	Tandem_Repeat	69855	69976	167	+	.	.
scaffold1711	subtractBed	intrn	86580	86671	.	+	.	Parent=CGI_10015600;
	scaffold1711	TRF	Tandem_Repeat	86580	86671	94	+	.	.
scaffold1711	subtractBed	intrn	88169	88274	.	+	.	Parent=CGI_10015600;
	scaffold1711	TRF	Tandem_Repeat	88169	88274	92	+	.	.
scaffold1711	subtractBed	intrn	88167	88266	.	+	.	Parent=CGI_10015600;
	scaffold1711	TRF	Tandem_Repeat	88167	88266	134	+	.	.
scaffold1711	subtractBed	intrn	289592	290387	.	+	.	Parent=CGI_10015607;
	scaffold1711	TRF	Tandem_Repeat	289592	290387	1290	+	.	.
scaffold1711	subtractBed	intrn	300345	300603	.	+	.	Parent=CGI_10015608;
	scaffold1711	TRF	Tandem_Repeat	300345	300622	227	+	.	.
scaffold1711	subtractBed	intrn	314203	314234	.	-	.	Parent=CGI_10015609;
	scaffold1711	TRF	Tandem_Repeat	314203	314234	64	+	.	.
scaffold1711	subtractBed	intrn	318155	318282	.	-	.	Parent=CGI_10015609;
	scaffold1711	TRF	Tandem_Repeat	318155	318282	89	+	.	.
scaffold1711	subtractBed	intrn	318329	318675	.	-	.	Parent=CGI_10015609;
	scaffold1711	TRF	Tandem_Repeat	318329	318675	181	+	.	.
scaffold1711	subtractBed	intrn	318436	318709	.	-	.	Parent=CGI_10015609;
	scaffold1711	TRF	Tandem_Repeat	318436	318709	126	+	.	.
scaffold1711	subtractBed	intrn	342220	342450	.	+	.	Parent=CGI_10015612;
	scaffold1711	WUBlastX	LTR_Gypsy-Cigr	342220	342450	85	-	.	.
scaffold1711	subtractBed	intrn	344393	344520	.	+	.	Parent=CGI_10015612;
	scaffold1711	TRF	Tandem_Repeat	344393	344520	127	+	.	.
scaffold1711	subtractBed	intrn	346840	346986	.	+	.	Parent=CGI_10015612;
	scaffold1711	WUBlastX	LINE_L1	346840	346986	53	+	.	.
scaffold1711	subtractBed	intrn	388711	388854	.	+	.	Parent=CGI_10015613;
	scaffold1711	TRF	Tandem_Repeat	388711	388854	243	+	.	.
scaffold1714	subtractBed	intrn	251551	252900	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	251551	252900	1712	+	.	.
scaffold1714	subtractBed	intrn	251551	252900	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	251551	252900	1691	+	.	.
scaffold1714	subtractBed	intrn	257350	257828	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	257350	257828	787	+	.	.
scaffold1714	subtractBed	intrn	257350	257828	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	257350	257828	822	+	.	.
scaffold1714	subtractBed	intrn	260640	260667	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	260640	260667	56	+	.	.
scaffold1714	subtractBed	intrn	260668	260697	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	260668	260697	60	+	.	.
scaffold1714	subtractBed	intrn	260873	260908	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	260873	260908	72	+	.	.
scaffold1714	subtractBed	intrn	265405	265480	.	+	.	Parent=CGI_10013676;
	scaffold1714	TRF	Tandem_Repeat	265405	265480	152	+	.	.
scaffold1714	subtractBed	intrn	283562	283911	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	283562	283911	700	+	.	.
scaffold1714	subtractBed	intrn	284441	285576	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	284441	285576	1687	+	.	.
scaffold1714	subtractBed	intrn	287384	287433	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	287384	287433	100	+	.	.
scaffold1714	subtractBed	intrn	289582	289729	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	289582	289729	188	+	.	.
scaffold1714	subtractBed	intrn	294170	294423	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	294170	294423	147	+	.	.
scaffold1714	subtractBed	intrn	294095	294511	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	294095	294511	304	+	.	.
scaffold1714	subtractBed	intrn	294313	294550	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	294313	294550	148	+	.	.
scaffold1714	subtractBed	intrn	294170	294526	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	294170	294526	378	+	.	.
scaffold1714	subtractBed	intrn	295531	295801	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	295531	295801	398	+	.	.
scaffold1714	subtractBed	intrn	299468	299864	.	+	.	Parent=CGI_10013678;
	scaffold1714	TRF	Tandem_Repeat	299455	299864	650	+	.	.
scaffold1714	subtractBed	intrn	307657	308126	.	+	.	Parent=CGI_10013680;
	scaffold1714	TRF	Tandem_Repeat	307657	308126	609	+	.	.
scaffold1714	subtractBed	intrn	314340	314380	.	+	.	Parent=CGI_10013680;
	scaffold1714	TRF	Tandem_Repeat	314340	314380	82	+	.	.
scaffold1714	subtractBed	intrn	315472	315499	.	+	.	Parent=CGI_10013680;
	scaffold1714	TRF	Tandem_Repeat	315472	315499	56	+	.	.
scaffold1714	subtractBed	intrn	316042	316088	.	+	.	Parent=CGI_10013680;
	scaffold1714	TRF	Tandem_Repeat	316042	316088	85	+	.	.
scaffold1714	subtractBed	intrn	312426	312605	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	312426	312605	37	-	.	.
scaffold1714	subtractBed	intrn	312035	312217	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	312035	312217	113	-	.	.
scaffold1714	subtractBed	intrn	312214	312456	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	312214	312456	116	-	.	.
scaffold1714	subtractBed	intrn	311883	312014	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	311883	312014	65	-	.	.
scaffold1714	subtractBed	intrn	311877	312044	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_CR1	311877	312044	43	-	.	.
scaffold1714	subtractBed	intrn	312465	312635	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	312465	312635	20	-	.	.
scaffold1714	subtractBed	intrn	311338	311820	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	311338	311820	183	-	.	.
scaffold1714	subtractBed	intrn	311581	311868	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_I	311581	311868	65	-	.	.
scaffold1714	subtractBed	intrn	312426	312563	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	312426	312563	51	-	.	.
scaffold1714	subtractBed	intrn	311159	311323	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_L2	311159	311323	31	-	.	.
scaffold1714	subtractBed	intrn	311251	311829	.	+	.	Parent=CGI_10013680;
	scaffold1714	WUBlastX	LINE_CR1	311251	311829	41	-	.	.
scaffold1715	subtractBed	intrn	23506	23559	.	+	.	Parent=CGI_10019659;
	scaffold1715	TRF	Tandem_Repeat	23506	23559	108	+	.	.
scaffold1715	subtractBed	intrn	25650	25678	.	+	.	Parent=CGI_10019659;
	scaffold1715	TRF	Tandem_Repeat	25650	25678	51	+	.	.
scaffold1715	subtractBed	intrn	26436	26993	.	+	.	Parent=CGI_10019659;
	scaffold1715	WUBlastX	LINE_R2-Hero	26436	26993	112	-	.	.
scaffold1715	subtractBed	intrn	61941	61982	.	+	.	Parent=CGI_10019661;
	scaffold1715	TRF	Tandem_Repeat	61941	61982	84	+	.	.
scaffold1715	subtractBed	intrn	64650	64701	.	+	.	Parent=CGI_10019661;
	scaffold1715	TRF	Tandem_Repeat	64650	64701	104	+	.	.
scaffold1715	subtractBed	intrn	89469	89554	.	+	.	Parent=CGI_10019662;
	scaffold1715	TRF	Tandem_Repeat	89469	89554	165	+	.	.
scaffold1715	subtractBed	intrn	108314	108375	.	+	.	Parent=CGI_10019662;
	scaffold1715	TRF	Tandem_Repeat	108314	108375	115	+	.	.
scaffold1715	subtractBed	intrn	125246	125306	.	+	.	Parent=CGI_10019663;
	scaffold1715	TRF	Tandem_Repeat	125246	125306	65	+	.	.
scaffold1715	subtractBed	intrn	127764	127804	.	+	.	Parent=CGI_10019663;
	scaffold1715	TRF	Tandem_Repeat	127764	127804	75	+	.	.
scaffold1715	subtractBed	intrn	153473	153512	.	+	.	Parent=CGI_10019664;
	scaffold1715	TRF	Tandem_Repeat	153473	153512	80	+	.	.
scaffold1715	subtractBed	intrn	157894	158639	.	+	.	Parent=CGI_10019664;
	scaffold1715	TRF	Tandem_Repeat	157894	158639	786	+	.	.
scaffold1715	subtractBed	intrn	181776	181888	.	-	.	Parent=CGI_10019666;
	scaffold1715	TRF	Tandem_Repeat	181776	181888	93	+	.	.
scaffold1715	subtractBed	intrn	243095	243138	.	-	.	Parent=CGI_10019669;
	scaffold1715	TRF	Tandem_Repeat	243095	243138	88	+	.	.
scaffold1715	subtractBed	intrn	270609	273250	.	+	.	Parent=CGI_10019670;
	scaffold1715	TRF	Tandem_Repeat	270609	273250	3437	+	.	.
scaffold1715	subtractBed	intrn	270609	272525	.	+	.	Parent=CGI_10019670;
	scaffold1715	TRF	Tandem_Repeat	270609	272525	2678	+	.	.
scaffold1715	subtractBed	intrn	272535	273251	.	+	.	Parent=CGI_10019670;
	scaffold1715	TRF	Tandem_Repeat	272535	273251	910	+	.	.
scaffold1715	subtractBed	intrn	293961	293994	.	-	.	Parent=CGI_10019671;
	scaffold1715	TRF	Tandem_Repeat	293961	293994	68	+	.	.
scaffold1715	subtractBed	intrn	326339	326719	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	326339	326719	89	+	.	.
scaffold1715	subtractBed	intrn	328038	328265	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	328038	328265	36	+	.	.
scaffold1715	subtractBed	intrn	328146	328367	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	328146	328367	33	+	.	.
scaffold1715	subtractBed	intrn	328143	328268	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	328143	328268	49	+	.	.
scaffold1715	subtractBed	intrn	326707	327936	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	326707	327936	231	+	.	.
scaffold1715	subtractBed	intrn	326983	327963	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Penelope	326983	327963	408	+	.	.
scaffold1715	subtractBed	intrn	332350	332401	.	-	.	Parent=CGI_10019672;
	scaffold1715	TRF	Tandem_Repeat	332350	332401	104	+	.	.
scaffold1715	subtractBed	intrn	334024	334230	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_L1-Tx1	334024	334230	22	-	.	.
scaffold1715	subtractBed	intrn	333198	333254	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LTR_Gypsy	333198	333254	45	+	.	.
scaffold1715	subtractBed	intrn	333434	333649	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LTR_Gypsy	333434	333649	20	+	.	.
scaffold1715	subtractBed	intrn	333262	333372	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LTR_Gypsy	333262	333372	42	+	.	.
scaffold1715	subtractBed	intrn	333528	333641	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LTR_Gypsy	333528	333641	29	+	.	.
scaffold1715	subtractBed	intrn	338282	338452	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_Jockey	338282	338452	45	-	.	.
scaffold1715	subtractBed	intrn	337939	338250	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_RTE-X	337939	338250	53	-	.	.
scaffold1715	subtractBed	intrn	337885	338025	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_RTE-X	337885	338025	21	-	.	.
scaffold1715	subtractBed	intrn	337575	337763	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_RTE-X	337575	337763	36	-	.	.
scaffold1715	subtractBed	intrn	337611	337775	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_RTE-X	337611	337775	43	-	.	.
scaffold1715	subtractBed	intrn	337784	337867	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_CR1-L2	337784	337867	25	-	.	.
scaffold1715	subtractBed	intrn	337542	337790	.	-	.	Parent=CGI_10019672;
	scaffold1715	WUBlastX	LINE_CR1	337542	337790	28	-	.	.
scaffold1715	subtractBed	intrn	357291	357569	.	-	.	Parent=CGI_10019673;
	scaffold1715	WUBlastX	LINE_L2	357291	357569	128	-	.	.
scaffold1715	subtractBed	intrn	406803	406937	.	+	.	Parent=CGI_10019674;
	scaffold1715	TRF	Tandem_Repeat	406803	406937	198	+	.	.
scaffold1715	subtractBed	intrn	413065	413120	.	+	.	Parent=CGI_10019674;
	scaffold1715	TRF	Tandem_Repeat	413065	413120	112	+	.	.
scaffold1715	subtractBed	intrn	417847	418214	.	+	.	Parent=CGI_10019674;
	scaffold1715	TRF	Tandem_Repeat	417847	418214	594	+	.	.
scaffold1715	subtractBed	intrn	429765	430019	.	+	.	Parent=CGI_10019676;
	scaffold1715	WUBlastX	LINE_L2	429453	430019	158	+	.	.
scaffold1715	subtractBed	intrn	444521	445141	.	+	.	Parent=CGI_10019678;
	scaffold1715	WUBlastX	LTR_Gypsy-Cigr	444521	445141	326	+	.	.
scaffold1715	subtractBed	intrn	455052	455708	.	+	.	Parent=CGI_10019678;
	scaffold1715	WUBlastX	DNA_IS4EU	455052	455708	320	+	.	.
scaffold1715	subtractBed	intrn	489356	489406	.	+	.	Parent=CGI_10019681;
	scaffold1715	TRF	Tandem_Repeat	489356	489406	102	+	.	.
scaffold1715	subtractBed	intrn	491232	491285	.	+	.	Parent=CGI_10019681;
	scaffold1715	TRF	Tandem_Repeat	491232	491285	67	+	.	.
scaffold1715	subtractBed	intrn	533550	533584	.	-	.	Parent=CGI_10019684;
	scaffold1715	TRF	Tandem_Repeat	533550	533584	70	+	.	.
scaffold1715	subtractBed	intrn	535586	535625	.	-	.	Parent=CGI_10019684;
	scaffold1715	TRF	Tandem_Repeat	535586	535625	80	+	.	.
scaffold1715	subtractBed	intrn	538620	538644	.	-	.	Parent=CGI_10019684;
	scaffold1715	TRF	Tandem_Repeat	538620	538644	50	+	.	.
scaffold1715	subtractBed	intrn	558345	558393	.	+	.	Parent=CGI_10019686;
	scaffold1715	TRF	Tandem_Repeat	558345	558393	98	+	.	.
scaffold1715	subtractBed	intrn	570432	570659	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_L2	570432	570659	130	+	.	.
scaffold1715	subtractBed	intrn	570984	571090	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_L2	570984	571172	53	+	.	.
scaffold1715	subtractBed	intrn	567670	567921	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_CR1-L2	567670	567921	27	+	.	.
scaffold1715	subtractBed	intrn	570372	570647	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_CR1-L2	570372	570647	128	+	.	.
scaffold1715	subtractBed	intrn	568809	569267	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_CR1-L2	568809	569267	245	+	.	.
scaffold1715	subtractBed	intrn	568635	569243	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_L2	568635	569243	61	+	.	.
scaffold1715	subtractBed	intrn	570659	570967	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_CR1-L2	570659	570967	145	+	.	.
scaffold1715	subtractBed	intrn	571123	571172	.	+	.	Parent=CGI_10019686;
	scaffold1715	WUBlastX	LINE_L2	570984	571172	53	+	.	.
scaffold1715	subtractBed	intrn	577900	577942	.	+	.	Parent=CGI_10019687;
	scaffold1715	TRF	Tandem_Repeat	577900	577942	86	+	.	.
scaffold1717	subtractBed	intrn	33436	33519	.	+	.	Parent=CGI_10013390;
	scaffold1717	TRF	Tandem_Repeat	33436	33519	168	+	.	.
scaffold1717	subtractBed	intrn	41925	43031	.	+	.	Parent=CGI_10013390;
	scaffold1717	WUBlastX	LINE_CR1-L2	41925	43031	254	-	.	.
scaffold1717	subtractBed	intrn	41582	41917	.	+	.	Parent=CGI_10013390;
	scaffold1717	WUBlastX	LINE_L2	41582	41917	26	-	.	.
scaffold1717	subtractBed	intrn	41925	43280	.	+	.	Parent=CGI_10013390;
	scaffold1717	WUBlastX	LINE_CR1	41925	43280	75	-	.	.
scaffold1717	subtractBed	intrn	44375	46484	.	+	.	Parent=CGI_10013390;
	scaffold1717	TRF	Tandem_Repeat	44375	46484	1832	+	.	.
scaffold1717	subtractBed	intrn	44393	45700	.	+	.	Parent=CGI_10013390;
	scaffold1717	TRF	Tandem_Repeat	44393	45700	324	+	.	.
scaffold1717	subtractBed	intrn	44375	46484	.	+	.	Parent=CGI_10013390;
	scaffold1717	TRF	Tandem_Repeat	44375	46484	2023	+	.	.
scaffold1717	subtractBed	intrn	59207	59251	.	+	.	Parent=CGI_10013391;
	scaffold1717	TRF	Tandem_Repeat	59207	59251	90	+	.	.
scaffold1717	subtractBed	intrn	64609	65064	.	+	.	Parent=CGI_10013391;
	scaffold1717	WUBlastX	LINE_CR1-L2	64609	65064	55	+	.	.
scaffold1717	subtractBed	intrn	64699	65376	.	+	.	Parent=CGI_10013391;
	scaffold1717	WUBlastX	LINE_L2	64699	65376	74	+	.	.
scaffold1717	subtractBed	intrn	96733	96855	.	-	.	Parent=CGI_10013393;
	scaffold1717	WUBlastX	DNA_hAT	96293	96988	123	-	.	.
scaffold1717	subtractBed	intrn	100646	100757	.	-	.	Parent=CGI_10013393;
	scaffold1717	TRF	Tandem_Repeat	100646	100757	73	+	.	.
scaffold1717	subtractBed	intrn	102933	102962	.	-	.	Parent=CGI_10013393;
	scaffold1717	TRF	Tandem_Repeat	102933	102962	60	+	.	.
scaffold1717	subtractBed	intrn	105680	105790	.	-	.	Parent=CGI_10013393;
	scaffold1717	TRF	Tandem_Repeat	105680	105790	75	+	.	.
scaffold1717	subtractBed	intrn	111463	111497	.	-	.	Parent=CGI_10013394;
	scaffold1717	TRF	Tandem_Repeat	111463	111497	70	+	.	.
scaffold1717	subtractBed	intrn	114370	114502	.	-	.	Parent=CGI_10013394;
	scaffold1717	TRF	Tandem_Repeat	114370	114502	169	+	.	.
scaffold1717	subtractBed	intrn	116768	116829	.	-	.	Parent=CGI_10013394;
	scaffold1717	TRF	Tandem_Repeat	116768	116829	108	+	.	.
scaffold1717	subtractBed	intrn	118754	118799	.	-	.	Parent=CGI_10013394;
	scaffold1717	TRF	Tandem_Repeat	118754	118799	92	+	.	.
scaffold1717	subtractBed	intrn	125235	125277	.	-	.	Parent=CGI_10013394;
	scaffold1717	TRF	Tandem_Repeat	125235	125277	86	+	.	.
scaffold1717	subtractBed	intrn	132061	133017	.	+	.	Parent=CGI_10013395;
	scaffold1717	TRF	Tandem_Repeat	132061	133017	1309	+	.	.
scaffold1717	subtractBed	intrn	146852	146943	.	+	.	Parent=CGI_10013396;
	scaffold1717	TRF	Tandem_Repeat	146852	146943	147	+	.	.
scaffold1717	subtractBed	intrn	179314	179975	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	179314	180025	862	+	.	.
scaffold1717	subtractBed	intrn	179314	179975	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	179314	180025	1057	+	.	.
scaffold1717	subtractBed	intrn	179314	179975	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	179314	180025	1041	+	.	.
scaffold1717	subtractBed	intrn	185259	185304	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	185259	185304	92	+	.	.
scaffold1717	subtractBed	intrn	185823	185847	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	185823	185847	50	+	.	.
scaffold1717	subtractBed	intrn	185881	185908	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	185881	185908	56	+	.	.
scaffold1717	subtractBed	intrn	205608	205633	.	-	.	Parent=CGI_10013398;
	scaffold1717	TRF	Tandem_Repeat	205608	205633	52	+	.	.
scaffold1717	subtractBed	intrn	221055	221102	.	+	.	Parent=CGI_10013399;
	scaffold1717	TRF	Tandem_Repeat	221055	221102	96	+	.	.
scaffold1717	subtractBed	intrn	226622	226762	.	+	.	Parent=CGI_10013399;
	scaffold1717	TRF	Tandem_Repeat	226622	226762	138	+	.	.
scaffold1719	subtractBed	intrn	106199	106383	.	-	.	Parent=CGI_10014272;
	scaffold1719	TRF	Tandem_Repeat	106199	106383	171	+	.	.
scaffold1719	subtractBed	intrn	129369	129585	.	-	.	Parent=CGI_10014274;
	scaffold1719	TRF	Tandem_Repeat	129369	129590	374	+	.	.
scaffold1719	subtractBed	intrn	150602	150653	.	-	.	Parent=CGI_10014276;
	scaffold1719	TRF	Tandem_Repeat	150602	150653	104	+	.	.
scaffold1719	subtractBed	intrn	164300	164334	.	-	.	Parent=CGI_10014277;
	scaffold1719	TRF	Tandem_Repeat	164300	164334	70	+	.	.
scaffold1719	subtractBed	intrn	178963	179030	.	-	.	Parent=CGI_10014281;
	scaffold1719	TRF	Tandem_Repeat	178963	179030	136	+	.	.
scaffold1719	subtractBed	intrn	183404	183435	.	-	.	Parent=CGI_10014281;
	scaffold1719	TRF	Tandem_Repeat	183404	183435	64	+	.	.
scaffold1719	subtractBed	intrn	189838	190485	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Gypsy	189838	190485	92	+	.	.
scaffold1719	subtractBed	intrn	190659	190697	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Gypsy	190659	190697	30	+	.	.
scaffold1719	subtractBed	intrn	189943	190461	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Gypsy	189943	190461	169	+	.	.
scaffold1719	subtractBed	intrn	197525	197824	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	197525	197824	204	-	.	.
scaffold1719	subtractBed	intrn	197845	198120	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	197845	198120	84	-	.	.
scaffold1719	subtractBed	intrn	197178	197282	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	197178	197282	28	-	.	.
scaffold1719	subtractBed	intrn	198439	198582	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	198439	198582	38	-	.	.
scaffold1719	subtractBed	intrn	198627	198857	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	198627	198857	60	-	.	.
scaffold1719	subtractBed	intrn	198487	198609	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	198487	198609	65	-	.	.
scaffold1719	subtractBed	intrn	196886	197155	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	196886	197155	81	-	.	.
scaffold1719	subtractBed	intrn	197175	197252	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	197175	197252	52	-	.	.
scaffold1719	subtractBed	intrn	197444	197848	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	197444	197848	120	-	.	.
scaffold1719	subtractBed	intrn	196546	196887	.	-	.	Parent=CGI_10014281;
	scaffold1719	WUBlastX	LTR_Ngaro	196546	196887	86	-	.	.
scaffold1719	subtractBed	intrn	220764	220868	.	-	.	Parent=CGI_10014283;
	scaffold1719	TRF	Tandem_Repeat	220764	220868	92	+	.	.
scaffold1719	subtractBed	intrn	229085	229205	.	-	.	Parent=CGI_10014283;
	scaffold1719	TRF	Tandem_Repeat	229085	229205	172	+	.	.
scaffold1719	subtractBed	intrn	232082	232372	.	-	.	Parent=CGI_10014283;
	scaffold1719	TRF	Tandem_Repeat	232082	232372	421	+	.	.
scaffold1719	subtractBed	intrn	245384	245566	.	-	.	Parent=CGI_10014283;
	scaffold1719	TRF	Tandem_Repeat	245384	245566	266	+	.	.
scaffold1719	subtractBed	intrn	299322	299370	.	-	.	Parent=CGI_10014286;
	scaffold1719	TRF	Tandem_Repeat	299322	299370	98	+	.	.
scaffold1719	subtractBed	intrn	301128	301163	.	-	.	Parent=CGI_10014286;
	scaffold1719	TRF	Tandem_Repeat	301128	301163	54	+	.	.
scaffold1719	subtractBed	intrn	309455	309500	.	-	.	Parent=CGI_10014286;
	scaffold1719	TRF	Tandem_Repeat	309455	309500	92	+	.	.
scaffold1719	subtractBed	intrn	312056	312252	.	-	.	Parent=CGI_10014286;
	scaffold1719	TRF	Tandem_Repeat	312056	312252	132	+	.	.
scaffold1719	subtractBed	intrn	316620	316925	.	-	.	Parent=CGI_10014286;
	scaffold1719	WUBlastX	LINE_RTE-X	316620	316925	57	-	.	.
scaffold1719	subtractBed	intrn	316221	316313	.	-	.	Parent=CGI_10014286;
	scaffold1719	WUBlastX	LINE_RTE-X	316221	316313	32	-	.	.
scaffold1719	subtractBed	intrn	316460	316744	.	-	.	Parent=CGI_10014286;
	scaffold1719	WUBlastX	LINE_RTE-X	316460	316744	28	-	.	.
scaffold1719	subtractBed	intrn	338192	338886	.	+	.	Parent=CGI_10014289;
	scaffold1719	TRF	Tandem_Repeat	338192	338886	821	+	.	.
scaffold1719	subtractBed	intrn	338192	338886	.	+	.	Parent=CGI_10014289;
	scaffold1719	TRF	Tandem_Repeat	338192	338886	766	+	.	.
scaffold1719	subtractBed	intrn	350216	350686	.	+	.	Parent=CGI_10014290;
	scaffold1719	TRF	Tandem_Repeat	350216	350686	385	+	.	.
scaffold1719	subtractBed	intrn	350216	350695	.	+	.	Parent=CGI_10014290;
	scaffold1719	TRF	Tandem_Repeat	350216	350695	482	+	.	.
scaffold1719	subtractBed	intrn	351908	352111	.	+	.	Parent=CGI_10014290;
	scaffold1719	TRF	Tandem_Repeat	351908	352111	300	+	.	.
scaffold1719	subtractBed	intrn	353137	353171	.	+	.	Parent=CGI_10014290;
	scaffold1719	TRF	Tandem_Repeat	353137	353171	54	+	.	.
scaffold172	subtractBed	intrn	15846	16010	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	15846	16010	69	+	.	.
scaffold172	subtractBed	intrn	15657	15980	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	15657	15980	51	+	.	.
scaffold172	subtractBed	intrn	16010	16171	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	16010	16171	95	+	.	.
scaffold172	subtractBed	intrn	15822	15950	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	15822	15950	69	+	.	.
scaffold172	subtractBed	intrn	15798	15950	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	15798	15950	60	+	.	.
scaffold172	subtractBed	intrn	9327	9908	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	DNA_Crypton	9327	9908	174	+	.	.
scaffold172	subtractBed	intrn	10194	10568	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	DNA_Crypton	10194	10568	52	+	.	.
scaffold172	subtractBed	intrn	15846	15950	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	15846	15950	84	+	.	.
scaffold172	subtractBed	intrn	10030	10104	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	DNA_Crypton	10030	10104	26	+	.	.
scaffold172	subtractBed	intrn	10188	10463	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	DNA_Crypton	10188	10463	59	+	.	.
scaffold172	subtractBed	intrn	16016	16297	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	16016	16297	73	+	.	.
scaffold172	subtractBed	intrn	16648	16839	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	16648	16839	46	+	.	.
scaffold172	subtractBed	intrn	16848	17732	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy-Cigr	16848	17732	174	+	.	.
scaffold172	subtractBed	intrn	16309	16446	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy	16309	16446	59	+	.	.
scaffold172	subtractBed	intrn	16342	16524	.	-	.	Parent=CGI_10013508;
	scaffold172	WUBlastX	LTR_Gypsy-Cigr	16342	16524	71	+	.	.
scaffold172	subtractBed	intrn	36499	36533	.	+	.	Parent=CGI_10013509;
	scaffold172	TRF	Tandem_Repeat	36499	36533	70	+	.	.
scaffold172	subtractBed	intrn	61379	61408	.	-	.	Parent=CGI_10013510;
	scaffold172	TRF	Tandem_Repeat	61379	61408	60	+	.	.
scaffold172	subtractBed	intrn	108593	109995	.	-	.	Parent=CGI_10013515;
	scaffold172	TRF	Tandem_Repeat	108593	109995	1686	+	.	.
scaffold172	subtractBed	intrn	108593	109995	.	+	.	Parent=CGI_10013516;
	scaffold172	TRF	Tandem_Repeat	108593	109995	1686	+	.	.
scaffold172	subtractBed	intrn	124173	124332	.	+	.	Parent=CGI_10013517;
	scaffold172	TRF	Tandem_Repeat	124173	124332	151	+	.	.
scaffold172	subtractBed	intrn	131087	131114	.	-	.	Parent=CGI_10013518;
	scaffold172	TRF	Tandem_Repeat	131087	131114	56	+	.	.
scaffold172	subtractBed	intrn	167735	167776	.	-	.	Parent=CGI_10013520;
	scaffold172	TRF	Tandem_Repeat	167735	167776	84	+	.	.
scaffold172	subtractBed	intrn	174899	174939	.	+	.	Parent=CGI_10013522;
	scaffold172	TRF	Tandem_Repeat	174899	174939	52	+	.	.
scaffold172	subtractBed	intrn	180769	181245	.	+	.	Parent=CGI_10013522;
	scaffold172	WUBlastX	DNA_TcMar-Marin	180769	181245	77	-	.	.
scaffold172	subtractBed	intrn	180823	181344	.	+	.	Parent=CGI_10013522;
	scaffold172	WUBlastX	DNA_TcMar-Marin	180823	181344	70	-	.	.
scaffold172	subtractBed	intrn	189849	189908	.	+	.	Parent=CGI_10013522;
	scaffold172	TRF	Tandem_Repeat	189849	189908	102	+	.	.
scaffold172	subtractBed	intrn	189849	189908	.	-	.	Parent=CGI_10013523;
	scaffold172	TRF	Tandem_Repeat	189849	189908	102	+	.	.
scaffold172	subtractBed	intrn	201622	201665	.	-	.	Parent=CGI_10013524;
	scaffold172	TRF	Tandem_Repeat	201622	201665	88	+	.	.
scaffold172	subtractBed	intrn	212309	213932	.	-	.	Parent=CGI_10013525;
	scaffold172	TRF	Tandem_Repeat	212309	213932	2498	+	.	.
scaffold172	subtractBed	intrn	278180	278356	.	-	.	Parent=CGI_10013528;
	scaffold172	WUBlastX	LTR_Ngaro	278180	278356	118	-	.	.
scaffold172	subtractBed	intrn	278846	279136	.	-	.	Parent=CGI_10013528;
	scaffold172	WUBlastX	LTR_Ngaro	278846	279136	34	-	.	.
scaffold172	subtractBed	intrn	279507	279881	.	-	.	Parent=CGI_10013528;
	scaffold172	WUBlastX	LTR_Ngaro	279507	279881	212	-	.	.
scaffold172	subtractBed	intrn	279067	279492	.	-	.	Parent=CGI_10013528;
	scaffold172	WUBlastX	LTR_Ngaro	279067	279492	204	-	.	.
scaffold172	subtractBed	intrn	278293	278829	.	-	.	Parent=CGI_10013528;
	scaffold172	WUBlastX	LTR_Ngaro	278293	278829	108	-	.	.
scaffold172	subtractBed	intrn	330842	331156	.	-	.	Parent=CGI_10013531;
	scaffold172	TRF	Tandem_Repeat	330842	331156	167	+	.	.
scaffold172	subtractBed	intrn	330802	331235	.	-	.	Parent=CGI_10013531;
	scaffold172	TRF	Tandem_Repeat	330802	331235	304	+	.	.
scaffold172	subtractBed	intrn	330879	331260	.	-	.	Parent=CGI_10013531;
	scaffold172	TRF	Tandem_Repeat	330879	331260	148	+	.	.
scaffold172	subtractBed	intrn	331693	332047	.	-	.	Parent=CGI_10013531;
	scaffold172	TRF	Tandem_Repeat	331693	332047	656	+	.	.
scaffold1720	subtractBed	intrn	27056	27087	.	-	.	Parent=CGI_10011937;
	scaffold1720	TRF	Tandem_Repeat	27056	27087	55	+	.	.
scaffold1720	subtractBed	intrn	27121	27175	.	-	.	Parent=CGI_10011937;
	scaffold1720	TRF	Tandem_Repeat	27121	27175	58	+	.	.
scaffold1720	subtractBed	intrn	34137	34168	.	-	.	Parent=CGI_10011938;
	scaffold1720	TRF	Tandem_Repeat	34137	34168	55	+	.	.
scaffold1720	subtractBed	intrn	50843	50871	.	-	.	Parent=CGI_10011940;
	scaffold1720	TRF	Tandem_Repeat	50843	50871	58	+	.	.
scaffold1720	subtractBed	intrn	107638	107671	.	+	.	Parent=CGI_10011943;
	scaffold1720	TRF	Tandem_Repeat	107638	107671	68	+	.	.
scaffold1720	subtractBed	intrn	109816	109857	.	+	.	Parent=CGI_10011943;
	scaffold1720	TRF	Tandem_Repeat	109816	109857	84	+	.	.
scaffold1720	subtractBed	intrn	161919	161980	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	161919	161980	124	+	.	.
scaffold1720	subtractBed	intrn	164999	165046	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	164999	165046	96	+	.	.
scaffold1720	subtractBed	intrn	175609	175684	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	175609	175684	152	+	.	.
scaffold1720	subtractBed	intrn	194265	194326	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	194265	194326	61	+	.	.
scaffold1720	subtractBed	intrn	198705	198825	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	198705	198825	192	+	.	.
scaffold1720	subtractBed	intrn	210184	210341	.	-	.	Parent=CGI_10011947;
	scaffold1720	TRF	Tandem_Repeat	210184	210341	253	+	.	.
scaffold1720	subtractBed	intrn	260751	261561	.	-	.	Parent=CGI_10011949;
	scaffold1720	TRF	Tandem_Repeat	260751	261561	1231	+	.	.
scaffold1720	subtractBed	intrn	281559	282506	.	+	.	Parent=CGI_10011951;
	scaffold1720	TRF	Tandem_Repeat	281525	282506	1856	+	.	.
scaffold1721	subtractBed	intrn	18953	19006	.	-	.	Parent=CGI_10003819;
	scaffold1721	TRF	Tandem_Repeat	18953	19006	81	+	.	.
scaffold1721	subtractBed	intrn	40152	40204	.	-	.	Parent=CGI_10003820;
	scaffold1721	TRF	Tandem_Repeat	40152	40204	106	+	.	.
scaffold1721	subtractBed	intrn	57717	57747	.	+	.	Parent=CGI_10003821;
	scaffold1721	TRF	Tandem_Repeat	57717	57747	62	+	.	.
scaffold1722	subtractBed	intrn	13074	13151	.	-	.	Parent=CGI_10014865;
	scaffold1722	TRF	Tandem_Repeat	13074	13151	101	+	.	.
scaffold1722	subtractBed	intrn	13178	13942	.	-	.	Parent=CGI_10014865;
	scaffold1722	WUBlastX	DNA_IS4EU	13178	13942	94	-	.	.
scaffold1722	subtractBed	intrn	16598	16883	.	-	.	Parent=CGI_10014865;
	scaffold1722	TRF	Tandem_Repeat	16598	16883	188	+	.	.
scaffold1722	subtractBed	intrn	16625	16883	.	-	.	Parent=CGI_10014865;
	scaffold1722	TRF	Tandem_Repeat	16625	16883	249	+	.	.
scaffold1722	subtractBed	intrn	16625	16883	.	-	.	Parent=CGI_10014865;
	scaffold1722	TRF	Tandem_Repeat	16625	16883	208	+	.	.
scaffold1722	subtractBed	intrn	45140	45188	.	+	.	Parent=CGI_10014867;
	scaffold1722	TRF	Tandem_Repeat	45140	45188	98	+	.	.
scaffold1722	subtractBed	intrn	85342	85390	.	+	.	Parent=CGI_10014872;
	scaffold1722	TRF	Tandem_Repeat	85342	85390	98	+	.	.
scaffold1722	subtractBed	intrn	85462	85501	.	+	.	Parent=CGI_10014872;
	scaffold1722	TRF	Tandem_Repeat	85462	85501	80	+	.	.
scaffold1722	subtractBed	intrn	99235	99379	.	+	.	Parent=CGI_10014872;
	scaffold1722	TRF	Tandem_Repeat	99201	99379	331	+	.	.
scaffold1722	subtractBed	intrn	114492	114528	.	+	.	Parent=CGI_10014874;
	scaffold1722	TRF	Tandem_Repeat	114492	114528	74	+	.	.
scaffold1722	subtractBed	intrn	112386	112679	.	+	.	Parent=CGI_10014874;
	scaffold1722	WUBlastX	LINE_L2	112386	112679	75	+	.	.
scaffold1722	subtractBed	intrn	114492	114528	.	-	.	Parent=CGI_10014875;
	scaffold1722	TRF	Tandem_Repeat	114492	114528	74	+	.	.
scaffold1722	subtractBed	intrn	112386	112679	.	-	.	Parent=CGI_10014875;
	scaffold1722	WUBlastX	LINE_L2	112386	112679	75	+	.	.
scaffold1722	subtractBed	intrn	122320	122604	.	-	.	Parent=CGI_10014876;
	scaffold1722	TRF	Tandem_Repeat	122320	122604	520	+	.	.
scaffold1722	subtractBed	intrn	124509	124765	.	-	.	Parent=CGI_10014876;
	scaffold1722	TRF	Tandem_Repeat	124509	124765	450	+	.	.
scaffold1722	subtractBed	intrn	165416	165472	.	-	.	Parent=CGI_10014878;
	scaffold1722	TRF	Tandem_Repeat	165416	165472	107	+	.	.
scaffold1722	subtractBed	intrn	242365	242630	.	+	.	Parent=CGI_10014885;
	scaffold1722	TRF	Tandem_Repeat	242365	242630	379	+	.	.
scaffold1722	subtractBed	intrn	242365	242630	.	+	.	Parent=CGI_10014885;
	scaffold1722	TRF	Tandem_Repeat	242365	242630	396	+	.	.
scaffold1722	subtractBed	intrn	244600	245169	.	+	.	Parent=CGI_10014886;
	scaffold1722	WUBlastX	LINE_R2-Hero	244600	245169	427	-	.	.
scaffold1722	subtractBed	intrn	254847	254911	.	-	.	Parent=CGI_10014887;
	scaffold1722	TRF	Tandem_Repeat	254847	254911	130	+	.	.
scaffold1722	subtractBed	intrn	310245	311006	.	-	.	Parent=CGI_10014888;
	scaffold1722	WUBlastX	LINE_RTE-X	310245	311006	142	-	.	.
scaffold1722	subtractBed	intrn	310365	311876	.	-	.	Parent=CGI_10014888;
	scaffold1722	WUBlastX	LINE_RTE-X	310365	311876	561	-	.	.
scaffold1723	subtractBed	intrn	29521	29586	.	+	.	Parent=CGI_10010514;
	scaffold1723	TRF	Tandem_Repeat	29521	29586	57	+	.	.
scaffold1723	subtractBed	intrn	31209	31474	.	+	.	Parent=CGI_10010514;
	scaffold1723	TRF	Tandem_Repeat	31209	31474	523	+	.	.
scaffold1723	subtractBed	intrn	49675	50080	.	-	.	Parent=CGI_10010516;
	scaffold1723	TRF	Tandem_Repeat	49675	50080	227	+	.	.
scaffold1723	subtractBed	intrn	49672	50027	.	-	.	Parent=CGI_10010516;
	scaffold1723	TRF	Tandem_Repeat	49672	50027	302	+	.	.
scaffold1723	subtractBed	intrn	54003	54151	.	-	.	Parent=CGI_10010516;
	scaffold1723	TRF	Tandem_Repeat	54003	54151	107	+	.	.
scaffold1723	subtractBed	intrn	84874	84905	.	+	.	Parent=CGI_10010517;
	scaffold1723	TRF	Tandem_Repeat	84874	84905	64	+	.	.
scaffold1723	subtractBed	intrn	168711	168757	.	+	.	Parent=CGI_10010523;
	scaffold1723	TRF	Tandem_Repeat	168711	168757	85	+	.	.
scaffold1723	subtractBed	intrn	177300	177393	.	+	.	Parent=CGI_10010523;
	scaffold1723	TRF	Tandem_Repeat	177300	177393	75	+	.	.
scaffold1723	subtractBed	intrn	182524	183314	.	+	.	Parent=CGI_10010523;
	scaffold1723	TRF	Tandem_Repeat	182490	183314	1095	+	.	.
scaffold1723	subtractBed	intrn	182524	183312	.	+	.	Parent=CGI_10010523;
	scaffold1723	TRF	Tandem_Repeat	182490	183312	1117	+	.	.
scaffold1723	subtractBed	intrn	248111	249018	.	-	.	Parent=CGI_10010532;
	scaffold1723	TRF	Tandem_Repeat	248097	249018	1372	+	.	.
scaffold1723	subtractBed	intrn	248111	249318	.	-	.	Parent=CGI_10010532;
	scaffold1723	TRF	Tandem_Repeat	248098	249318	796	+	.	.
scaffold1723	subtractBed	intrn	249039	249399	.	-	.	Parent=CGI_10010532;
	scaffold1723	TRF	Tandem_Repeat	249039	249399	596	+	.	.
scaffold1723	subtractBed	intrn	250190	250539	.	-	.	Parent=CGI_10010532;
	scaffold1723	TRF	Tandem_Repeat	250190	250539	596	+	.	.
scaffold1723	subtractBed	intrn	252161	252854	.	-	.	Parent=CGI_10010532;
	scaffold1723	TRF	Tandem_Repeat	252161	252877	1047	+	.	.
scaffold1725	subtractBed	intrn	37415	37773	.	-	.	Parent=CGI_10004728;
	scaffold1725	WUBlastX	DNA_IS4EU	37415	37843	51	-	.	.
scaffold1725	subtractBed	intrn	105456	105575	.	+	.	Parent=CGI_10004731;
	scaffold1725	TRF	Tandem_Repeat	105456	105575	59	+	.	.
scaffold1725	subtractBed	intrn	107151	107270	.	+	.	Parent=CGI_10004731;
	scaffold1725	TRF	Tandem_Repeat	107151	107270	75	+	.	.
scaffold1726	subtractBed	intrn	40695	40728	.	+	.	Parent=CGI_10015630;
	scaffold1726	TRF	Tandem_Repeat	40695	40728	68	+	.	.
scaffold1726	subtractBed	intrn	42252	42309	.	+	.	Parent=CGI_10015630;
	scaffold1726	TRF	Tandem_Repeat	42252	42309	116	+	.	.
scaffold1726	subtractBed	intrn	92058	92457	.	+	.	Parent=CGI_10015632;
	scaffold1726	TRF	Tandem_Repeat	92058	92457	543	+	.	.
scaffold1726	subtractBed	intrn	93645	93674	.	+	.	Parent=CGI_10015632;
	scaffold1726	TRF	Tandem_Repeat	93645	93674	60	+	.	.
scaffold1726	subtractBed	intrn	101578	101615	.	-	.	Parent=CGI_10015633;
	scaffold1726	TRF	Tandem_Repeat	101578	101615	76	+	.	.
scaffold1726	subtractBed	intrn	103131	103184	.	-	.	Parent=CGI_10015633;
	scaffold1726	TRF	Tandem_Repeat	103131	103184	108	+	.	.
scaffold1726	subtractBed	intrn	105266	105350	.	-	.	Parent=CGI_10015633;
	scaffold1726	TRF	Tandem_Repeat	105266	105350	170	+	.	.
scaffold1726	subtractBed	intrn	106295	106329	.	-	.	Parent=CGI_10015633;
	scaffold1726	TRF	Tandem_Repeat	106295	106329	70	+	.	.
scaffold1726	subtractBed	intrn	117040	117084	.	-	.	Parent=CGI_10015634;
	scaffold1726	TRF	Tandem_Repeat	117040	117084	90	+	.	.
scaffold1726	subtractBed	intrn	122306	122445	.	-	.	Parent=CGI_10015634;
	scaffold1726	TRF	Tandem_Repeat	122306	122445	105	+	.	.
scaffold1726	subtractBed	intrn	129820	129857	.	+	.	Parent=CGI_10015635;
	scaffold1726	TRF	Tandem_Repeat	129820	129857	76	+	.	.
scaffold1726	subtractBed	intrn	145620	145652	.	+	.	Parent=CGI_10015635;
	scaffold1726	TRF	Tandem_Repeat	145620	145652	57	+	.	.
scaffold1726	subtractBed	intrn	153046	153088	.	+	.	Parent=CGI_10015635;
	scaffold1726	TRF	Tandem_Repeat	153046	153088	86	+	.	.
scaffold1726	subtractBed	intrn	154506	154549	.	+	.	Parent=CGI_10015635;
	scaffold1726	TRF	Tandem_Repeat	154506	154549	79	+	.	.
scaffold1726	subtractBed	intrn	166265	166826	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	166265	166826	234	+	.	.
scaffold1726	subtractBed	intrn	166610	166808	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	166610	166808	143	+	.	.
scaffold1726	subtractBed	intrn	167210	167460	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	167210	167460	389	+	.	.
scaffold1726	subtractBed	intrn	172096	172150	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	172096	172150	101	+	.	.
scaffold1726	subtractBed	intrn	172768	172944	.	+	.	Parent=CGI_10015636;
	scaffold1726	WUBlastX	LINE_RTE-BovB	172768	172944	91	-	.	.
scaffold1726	subtractBed	intrn	180053	180078	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	180053	180078	52	+	.	.
scaffold1726	subtractBed	intrn	180415	180440	.	+	.	Parent=CGI_10015636;
	scaffold1726	TRF	Tandem_Repeat	180415	180440	52	+	.	.
scaffold1726	subtractBed	intrn	282760	283231	.	-	.	Parent=CGI_10015637;
	scaffold1726	TRF	Tandem_Repeat	282760	283231	304	+	.	.
scaffold1726	subtractBed	intrn	282663	283252	.	-	.	Parent=CGI_10015637;
	scaffold1726	TRF	Tandem_Repeat	282663	283252	181	+	.	.
scaffold1726	subtractBed	intrn	283051	283205	.	-	.	Parent=CGI_10015637;
	scaffold1726	TRF	Tandem_Repeat	283051	283205	96	+	.	.
scaffold1726	subtractBed	intrn	282681	283241	.	-	.	Parent=CGI_10015637;
	scaffold1726	TRF	Tandem_Repeat	282681	283241	583	+	.	.
scaffold1726	subtractBed	intrn	315253	315448	.	-	.	Parent=CGI_10015638;
	scaffold1726	TRF	Tandem_Repeat	315253	315448	286	+	.	.
scaffold1726	subtractBed	intrn	316056	316205	.	-	.	Parent=CGI_10015638;
	scaffold1726	TRF	Tandem_Repeat	316056	316205	151	+	.	.
scaffold1726	subtractBed	intrn	325887	325921	.	-	.	Parent=CGI_10015639;
	scaffold1726	TRF	Tandem_Repeat	325887	325921	52	+	.	.
scaffold1726	subtractBed	intrn	337140	337809	.	-	.	Parent=CGI_10015640;
	scaffold1726	TRF	Tandem_Repeat	337140	337809	1205	+	.	.
scaffold1726	subtractBed	intrn	354042	354203	.	-	.	Parent=CGI_10015641;
	scaffold1726	TRF	Tandem_Repeat	354042	354203	288	+	.	.
scaffold1726	subtractBed	intrn	370670	370708	.	+	.	Parent=CGI_10015644;
	scaffold1726	TRF	Tandem_Repeat	370670	370708	78	+	.	.
scaffold1727	subtractBed	intrn	30639	31884	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	30639	31884	1772	+	.	.
scaffold1727	subtractBed	intrn	33105	33150	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	33105	33150	57	+	.	.
scaffold1727	subtractBed	intrn	33108	33149	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	33108	33149	50	+	.	.
scaffold1727	subtractBed	intrn	35544	35578	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	35544	35578	52	+	.	.
scaffold1727	subtractBed	intrn	35548	35582	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	35548	35582	61	+	.	.
scaffold1727	subtractBed	intrn	39088	39141	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	39088	39141	74	+	.	.
scaffold1727	subtractBed	intrn	40711	40780	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	40711	40780	52	+	.	.
scaffold1727	subtractBed	intrn	37442	38917	.	+	.	Parent=CGI_10002672;
	scaffold1727	WUBlastX	DNA_hAT-hATw	37442	38917	184	+	.	.
scaffold1727	subtractBed	intrn	42720	42770	.	+	.	Parent=CGI_10002672;
	scaffold1727	TRF	Tandem_Repeat	42720	42770	66	+	.	.
scaffold1727	subtractBed	intrn	41839	42657	.	+	.	Parent=CGI_10002672;
	scaffold1727	WUBlastX	RC_Helitron	41839	42657	213	-	.	.
scaffold1727	subtractBed	intrn	41698	42663	.	+	.	Parent=CGI_10002672;
	scaffold1727	WUBlastX	RC_Helitron	41698	42663	125	-	.	.
scaffold1728	subtractBed	intrn	5218	5279	.	-	.	Parent=CGI_10004906;
	scaffold1728	TRF	Tandem_Repeat	5218	5279	63	+	.	.
scaffold1728	subtractBed	intrn	19723	19758	.	-	.	Parent=CGI_10004906;
	scaffold1728	TRF	Tandem_Repeat	19723	19758	63	+	.	.
scaffold1728	subtractBed	intrn	80422	80448	.	-	.	Parent=CGI_10004910;
	scaffold1728	TRF	Tandem_Repeat	80422	80448	54	+	.	.
scaffold1728	subtractBed	intrn	97100	97144	.	+	.	Parent=CGI_10004912;
	scaffold1728	TRF	Tandem_Repeat	97100	97144	90	+	.	.
scaffold1729	subtractBed	intrn	53353	55116	.	+	.	Parent=CGI_10008485;
	scaffold1729	WUBlastX	DNA_En-Spm	53353	55116	334	+	.	.
scaffold1729	subtractBed	intrn	53461	54555	.	+	.	Parent=CGI_10008485;
	scaffold1729	WUBlastX	DNA_En-Spm	53461	54555	345	+	.	.
scaffold1729	subtractBed	intrn	136771	136806	.	-	.	Parent=CGI_10008488;
	scaffold1729	TRF	Tandem_Repeat	136771	136806	72	+	.	.
scaffold1729	subtractBed	intrn	139824	139898	.	-	.	Parent=CGI_10008488;
	scaffold1729	TRF	Tandem_Repeat	139824	139898	141	+	.	.
scaffold1729	subtractBed	intrn	140542	140594	.	-	.	Parent=CGI_10008488;
	scaffold1729	TRF	Tandem_Repeat	140542	140594	97	+	.	.
scaffold1729	subtractBed	intrn	156679	156717	.	-	.	Parent=CGI_10008489;
	scaffold1729	TRF	Tandem_Repeat	156679	156717	53	+	.	.
scaffold1729	subtractBed	intrn	157883	157935	.	-	.	Parent=CGI_10008489;
	scaffold1729	TRF	Tandem_Repeat	157883	157935	106	+	.	.
scaffold1729	subtractBed	intrn	159032	159059	.	-	.	Parent=CGI_10008489;
	scaffold1729	TRF	Tandem_Repeat	159032	159059	56	+	.	.
scaffold1729	subtractBed	intrn	156679	156717	.	+	.	Parent=CGI_10008490;
	scaffold1729	TRF	Tandem_Repeat	156679	156717	53	+	.	.
scaffold1729	subtractBed	intrn	157883	157935	.	+	.	Parent=CGI_10008490;
	scaffold1729	TRF	Tandem_Repeat	157883	157935	106	+	.	.
scaffold1729	subtractBed	intrn	159032	159059	.	+	.	Parent=CGI_10008490;
	scaffold1729	TRF	Tandem_Repeat	159032	159059	56	+	.	.
scaffold1729	subtractBed	intrn	163036	163061	.	+	.	Parent=CGI_10008490;
	scaffold1729	TRF	Tandem_Repeat	163036	163061	52	+	.	.
scaffold1729	subtractBed	intrn	197998	198885	.	+	.	Parent=CGI_10008492;
	scaffold1729	WUBlastX	LTR_Ngaro	197998	198885	490	+	.	.
scaffold1729	subtractBed	intrn	197242	197319	.	+	.	Parent=CGI_10008492;
	scaffold1729	WUBlastX	LTR_Ngaro	197242	197319	26	+	.	.
scaffold1729	subtractBed	intrn	197260	197319	.	+	.	Parent=CGI_10008492;
	scaffold1729	WUBlastX	LTR_Ngaro	197260	197319	35	+	.	.
scaffold173	subtractBed	intrn	8181	8225	.	+	.	Parent=CGI_10008784;
	scaffold173	TRF	Tandem_Repeat	8181	8225	72	+	.	.
scaffold173	subtractBed	intrn	128034	128080	.	+	.	Parent=CGI_10008792;
	scaffold173	TRF	Tandem_Repeat	128034	128080	67	+	.	.
scaffold173	subtractBed	intrn	135069	135121	.	+	.	Parent=CGI_10008792;
	scaffold173	TRF	Tandem_Repeat	135069	135121	106	+	.	.
scaffold173	subtractBed	intrn	171969	172014	.	+	.	Parent=CGI_10008793;
	scaffold173	TRF	Tandem_Repeat	171969	172014	58	+	.	.
scaffold173	subtractBed	intrn	183830	184032	.	+	.	Parent=CGI_10008794;
	scaffold173	TRF	Tandem_Repeat	183830	184032	379	+	.	.
scaffold173	subtractBed	intrn	217119	217382	.	+	.	Parent=CGI_10008795;
	scaffold173	TRF	Tandem_Repeat	217119	217382	354	+	.	.
scaffold1730	subtractBed	intrn	7553	7600	.	+	.	Parent=CGI_10012252;
	scaffold1730	TRF	Tandem_Repeat	7553	7600	96	+	.	.
scaffold1730	subtractBed	intrn	115633	115959	.	-	.	Parent=CGI_10012254;
	scaffold1730	WUBlastX	DNA_Maverick	115633	115959	64	+	.	.
scaffold1730	subtractBed	intrn	115876	116022	.	-	.	Parent=CGI_10012254;
	scaffold1730	WUBlastX	DNA_Maverick	115876	116022	23	+	.	.
scaffold1730	subtractBed	intrn	129544	129564	.	-	.	Parent=CGI_10012255;
	scaffold1730	WUBlastX	DNA_IS4EU	129544	130173	60	-	.	.
scaffold1730	subtractBed	intrn	129792	130173	.	-	.	Parent=CGI_10012255;
	scaffold1730	WUBlastX	DNA_IS4EU	129544	130173	60	-	.	.
scaffold1730	subtractBed	intrn	135196	135260	.	-	.	Parent=CGI_10012255;
	scaffold1730	TRF	Tandem_Repeat	135196	135260	98	+	.	.
scaffold1730	subtractBed	intrn	135359	135390	.	-	.	Parent=CGI_10012255;
	scaffold1730	TRF	Tandem_Repeat	135359	135390	64	+	.	.
scaffold1730	subtractBed	intrn	134056	134436	.	-	.	Parent=CGI_10012255;
	scaffold1730	WUBlastX	DNA_Maverick	134056	134436	285	+	.	.
scaffold1730	subtractBed	intrn	153771	153822	.	-	.	Parent=CGI_10012257;
	scaffold1730	TRF	Tandem_Repeat	153771	153822	86	+	.	.
scaffold1730	subtractBed	intrn	155286	155321	.	-	.	Parent=CGI_10012257;
	scaffold1730	TRF	Tandem_Repeat	155286	155321	72	+	.	.
scaffold1730	subtractBed	intrn	155477	155564	.	-	.	Parent=CGI_10012257;
	scaffold1730	TRF	Tandem_Repeat	155477	155564	176	+	.	.
scaffold1730	subtractBed	intrn	196819	197097	.	+	.	Parent=CGI_10012260;
	scaffold1730	WUBlastX	LTR_Gypsy	196819	197097	79	+	.	.
scaffold1730	subtractBed	intrn	196825	196959	.	+	.	Parent=CGI_10012260;
	scaffold1730	WUBlastX	LTR_Gypsy-Cigr	196825	196959	97	+	.	.
scaffold1731	subtractBed	intrn	23003	23110	.	-	.	Parent=CGI_10001591;
	scaffold1731	WUBlastX	LINE_RTE-BovB	23003	23110	61	+	.	.
scaffold1733	subtractBed	intrn	72824	72867	.	+	.	Parent=CGI_10009480;
	scaffold1733	TRF	Tandem_Repeat	72824	72867	61	+	.	.
scaffold1733	subtractBed	intrn	72825	72863	.	+	.	Parent=CGI_10009480;
	scaffold1733	TRF	Tandem_Repeat	72825	72863	51	+	.	.
scaffold1733	subtractBed	intrn	72875	73674	.	+	.	Parent=CGI_10009480;
	scaffold1733	TRF	Tandem_Repeat	72875	73674	1093	+	.	.
scaffold1733	subtractBed	intrn	159621	159671	.	+	.	Parent=CGI_10009488;
	scaffold1733	TRF	Tandem_Repeat	159621	159671	102	+	.	.
scaffold1733	subtractBed	intrn	165874	165962	.	+	.	Parent=CGI_10009488;
	scaffold1733	TRF	Tandem_Repeat	165874	165962	169	+	.	.
scaffold1733	subtractBed	intrn	164622	164837	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LINE_CR1-L2	164622	164837	41	+	.	.
scaffold1733	subtractBed	intrn	164854	165315	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LINE_CR1-L2	164854	165315	91	+	.	.
scaffold1733	subtractBed	intrn	164541	164837	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LINE_CR1	164541	164837	35	+	.	.
scaffold1733	subtractBed	intrn	164854	165231	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LINE_L2	164854	165231	162	+	.	.
scaffold1733	subtractBed	intrn	163935	164173	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LINE_CR1	163751	164173	24	+	.	.
scaffold1733	subtractBed	intrn	178481	178547	.	+	.	Parent=CGI_10009488;
	scaffold1733	TRF	Tandem_Repeat	178481	178547	125	+	.	.
scaffold1733	subtractBed	intrn	179554	179602	.	+	.	Parent=CGI_10009488;
	scaffold1733	TRF	Tandem_Repeat	179554	179602	98	+	.	.
scaffold1733	subtractBed	intrn	175077	176183	.	+	.	Parent=CGI_10009488;
	scaffold1733	WUBlastX	LTR_Pao	175077	176183	1120	+	.	.
scaffold1733	subtractBed	intrn	228255	228329	.	+	.	Parent=CGI_10009491;
	scaffold1733	TRF	Tandem_Repeat	228255	228329	87	+	.	.
scaffold1734	subtractBed	intrn	7433	7648	.	+	.	Parent=CGI_10010533;
	scaffold1734	TRF	Tandem_Repeat	7433	7648	281	+	.	.
scaffold1734	subtractBed	intrn	11017	11057	.	+	.	Parent=CGI_10010533;
	scaffold1734	TRF	Tandem_Repeat	11017	11057	73	+	.	.
scaffold1734	subtractBed	intrn	11244	11290	.	+	.	Parent=CGI_10010533;
	scaffold1734	TRF	Tandem_Repeat	11244	11290	94	+	.	.
scaffold1734	subtractBed	intrn	20356	20387	.	+	.	Parent=CGI_10010534;
	scaffold1734	TRF	Tandem_Repeat	20356	20387	64	+	.	.
scaffold1734	subtractBed	intrn	153832	154470	.	+	.	Parent=CGI_10010541;
	scaffold1734	WUBlastX	LINE_CR1-L2	153832	154470	112	-	.	.
scaffold1734	subtractBed	intrn	153895	154668	.	+	.	Parent=CGI_10010541;
	scaffold1734	WUBlastX	LINE_L2	153895	154668	85	-	.	.
scaffold1734	subtractBed	intrn	153991	154467	.	+	.	Parent=CGI_10010541;
	scaffold1734	WUBlastX	LINE_L2	153991	154467	197	-	.	.
scaffold1734	subtractBed	intrn	153676	154467	.	+	.	Parent=CGI_10010541;
	scaffold1734	WUBlastX	LINE_CR1	153676	154467	83	-	.	.
scaffold1735	subtractBed	intrn	33649	33674	.	+	.	Parent=CGI_10003743;
	scaffold1735	TRF	Tandem_Repeat	33649	33674	52	+	.	.
scaffold1735	subtractBed	intrn	33672	33716	.	+	.	Parent=CGI_10003743;
	scaffold1735	TRF	Tandem_Repeat	33672	33716	90	+	.	.
scaffold1735	subtractBed	intrn	61794	61845	.	-	.	Parent=CGI_10003744;
	scaffold1735	TRF	Tandem_Repeat	61794	61845	90	+	.	.
scaffold1735	subtractBed	intrn	65266	65420	.	-	.	Parent=CGI_10003745;
	scaffold1735	TRF	Tandem_Repeat	65266	65420	283	+	.	.
scaffold1735	subtractBed	intrn	73522	73546	.	-	.	Parent=CGI_10003745;
	scaffold1735	TRF	Tandem_Repeat	73522	73546	50	+	.	.
scaffold1736	subtractBed	intrn	23195	23443	.	+	.	Parent=CGI_10020947;
	scaffold1736	WUBlastX	DNA_hAT-Blackja	23195	23443	66	-	.	.
scaffold1736	subtractBed	intrn	111220	111309	.	-	.	Parent=CGI_10020953;
	scaffold1736	TRF	Tandem_Repeat	111220	111309	146	+	.	.
scaffold1736	subtractBed	intrn	116997	117163	.	-	.	Parent=CGI_10020953;
	scaffold1736	TRF	Tandem_Repeat	116997	117163	180	+	.	.
scaffold1736	subtractBed	intrn	167355	167470	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	167355	167470	214	+	.	.
scaffold1736	subtractBed	intrn	168396	168444	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	168396	168444	98	+	.	.
scaffold1736	subtractBed	intrn	180234	180279	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	180234	180279	92	+	.	.
scaffold1736	subtractBed	intrn	182275	182323	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	182275	182323	98	+	.	.
scaffold1736	subtractBed	intrn	184657	184882	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	184657	184882	153	+	.	.
scaffold1736	subtractBed	intrn	186332	186404	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	186332	186404	146	+	.	.
scaffold1736	subtractBed	intrn	188234	188308	.	-	.	Parent=CGI_10020954;
	scaffold1736	TRF	Tandem_Repeat	188234	188308	132	+	.	.
scaffold1736	subtractBed	intrn	271881	272300	.	+	.	Parent=CGI_10020962;
	scaffold1736	WUBlastX	LINE_L1-Tx1	271881	272300	30	+	.	.
scaffold1736	subtractBed	intrn	272605	272766	.	+	.	Parent=CGI_10020962;
	scaffold1736	WUBlastX	LINE_L1-Tx1	272605	272766	22	+	.	.
scaffold1736	subtractBed	intrn	274150	274206	.	+	.	Parent=CGI_10020962;
	scaffold1736	TRF	Tandem_Repeat	274150	274206	107	+	.	.
scaffold1736	subtractBed	intrn	341945	342006	.	-	.	Parent=CGI_10020965;
	scaffold1736	TRF	Tandem_Repeat	341945	342006	106	+	.	.
scaffold1736	subtractBed	intrn	345236	345304	.	-	.	Parent=CGI_10020965;
	scaffold1736	TRF	Tandem_Repeat	345236	345304	138	+	.	.
scaffold1736	subtractBed	intrn	432024	432096	.	-	.	Parent=CGI_10020973;
	scaffold1736	TRF	Tandem_Repeat	432024	432096	146	+	.	.
scaffold1736	subtractBed	intrn	433096	433139	.	-	.	Parent=CGI_10020973;
	scaffold1736	TRF	Tandem_Repeat	433096	433139	88	+	.	.
scaffold1736	subtractBed	intrn	440670	441958	.	+	.	Parent=CGI_10020974;
	scaffold1736	TRF	Tandem_Repeat	440670	441958	1877	+	.	.
scaffold1736	subtractBed	intrn	452350	452384	.	+	.	Parent=CGI_10020974;
	scaffold1736	TRF	Tandem_Repeat	452350	452384	52	+	.	.
scaffold1736	subtractBed	intrn	452589	453343	.	+	.	Parent=CGI_10020974;
	scaffold1736	TRF	Tandem_Repeat	452589	453343	1032	+	.	.
scaffold1736	subtractBed	intrn	473685	473740	.	+	.	Parent=CGI_10020977;
	scaffold1736	TRF	Tandem_Repeat	473685	473740	112	+	.	.
scaffold1736	subtractBed	intrn	501155	501197	.	+	.	Parent=CGI_10020979;
	scaffold1736	TRF	Tandem_Repeat	501155	501197	86	+	.	.
scaffold1736	subtractBed	intrn	505140	505231	.	+	.	Parent=CGI_10020980;
	scaffold1736	TRF	Tandem_Repeat	505140	505231	107	+	.	.
scaffold1736	subtractBed	intrn	505308	505425	.	+	.	Parent=CGI_10020980;
	scaffold1736	TRF	Tandem_Repeat	505308	505425	105	+	.	.
scaffold1736	subtractBed	intrn	505477	505603	.	+	.	Parent=CGI_10020980;
	scaffold1736	TRF	Tandem_Repeat	505477	505603	121	+	.	.
scaffold1736	subtractBed	intrn	505695	505788	.	+	.	Parent=CGI_10020980;
	scaffold1736	TRF	Tandem_Repeat	505695	505788	91	+	.	.
scaffold1736	subtractBed	intrn	546209	546266	.	+	.	Parent=CGI_10020984;
	scaffold1736	TRF	Tandem_Repeat	546209	546266	116	+	.	.
scaffold1736	subtractBed	intrn	582083	582132	.	+	.	Parent=CGI_10020986;
	scaffold1736	TRF	Tandem_Repeat	582083	582132	100	+	.	.
scaffold1736	subtractBed	intrn	619997	621006	.	-	.	Parent=CGI_10020987;
	scaffold1736	TRF	Tandem_Repeat	619997	621006	742	+	.	.
scaffold1736	subtractBed	intrn	619997	621001	.	-	.	Parent=CGI_10020987;
	scaffold1736	TRF	Tandem_Repeat	619997	621001	742	+	.	.
scaffold1736	subtractBed	intrn	624788	624819	.	-	.	Parent=CGI_10020987;
	scaffold1736	TRF	Tandem_Repeat	624788	624819	64	+	.	.
scaffold1736	subtractBed	intrn	627538	627669	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627538	627669	46	-	.	.
scaffold1736	subtractBed	intrn	627627	627938	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627627	627938	26	-	.	.
scaffold1736	subtractBed	intrn	627053	627490	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627053	627490	56	-	.	.
scaffold1736	subtractBed	intrn	627627	627869	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627627	627869	67	-	.	.
scaffold1736	subtractBed	intrn	627197	627538	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627197	627538	64	-	.	.
scaffold1736	subtractBed	intrn	627585	627815	.	-	.	Parent=CGI_10020987;
	scaffold1736	WUBlastX	LINE_RTE-X	627585	627815	82	-	.	.
scaffold1737	subtractBed	intrn	122072	122099	.	+	.	Parent=CGI_10018248;
	scaffold1737	TRF	Tandem_Repeat	122072	122099	56	+	.	.
scaffold1737	subtractBed	intrn	401327	402932	.	-	.	Parent=CGI_10018250;
	scaffold1737	TRF	Tandem_Repeat	401327	402932	2959	+	.	.
scaffold1737	subtractBed	intrn	407226	407721	.	-	.	Parent=CGI_10018250;
	scaffold1737	TRF	Tandem_Repeat	407226	407721	582	+	.	.
scaffold1737	subtractBed	intrn	409975	410415	.	-	.	Parent=CGI_10018250;
	scaffold1737	TRF	Tandem_Repeat	409975	410415	677	+	.	.
scaffold1737	subtractBed	intrn	412067	412270	.	-	.	Parent=CGI_10018250;
	scaffold1737	TRF	Tandem_Repeat	412067	412270	311	+	.	.
scaffold1737	subtractBed	intrn	413920	414149	.	-	.	Parent=CGI_10018250;
	scaffold1737	TRF	Tandem_Repeat	413920	414149	397	+	.	.
scaffold1737	subtractBed	intrn	422711	422769	.	-	.	Parent=CGI_10018251;
	scaffold1737	TRF	Tandem_Repeat	422711	422769	118	+	.	.
scaffold1737	subtractBed	intrn	441087	441111	.	+	.	Parent=CGI_10018254;
	scaffold1737	TRF	Tandem_Repeat	441087	441111	50	+	.	.
scaffold1737	subtractBed	intrn	443650	445458	.	+	.	Parent=CGI_10018254;
	scaffold1737	TRF	Tandem_Repeat	443650	445458	2075	+	.	.
scaffold1737	subtractBed	intrn	450972	451097	.	+	.	Parent=CGI_10018255;
	scaffold1737	TRF	Tandem_Repeat	450972	451097	155	+	.	.
scaffold1737	subtractBed	intrn	450972	451154	.	+	.	Parent=CGI_10018255;
	scaffold1737	TRF	Tandem_Repeat	450972	451154	141	+	.	.
scaffold1737	subtractBed	intrn	451181	451330	.	+	.	Parent=CGI_10018255;
	scaffold1737	TRF	Tandem_Repeat	451181	451330	147	+	.	.
scaffold1737	subtractBed	intrn	453625	453679	.	+	.	Parent=CGI_10018255;
	scaffold1737	TRF	Tandem_Repeat	453625	453679	110	+	.	.
scaffold1737	subtractBed	intrn	462151	462471	.	+	.	Parent=CGI_10018255;
	scaffold1737	WUBlastX	LINE_RTE-X	462151	462471	76	-	.	.
scaffold1737	subtractBed	intrn	462205	462408	.	+	.	Parent=CGI_10018255;
	scaffold1737	WUBlastX	LINE_RTE-X	462205	462408	105	-	.	.
scaffold1737	subtractBed	intrn	462111	462188	.	+	.	Parent=CGI_10018255;
	scaffold1737	WUBlastX	LINE_RTE-X	462111	462188	24	-	.	.
scaffold1737	subtractBed	intrn	466560	466981	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	466560	466981	344	+	.	.
scaffold1737	subtractBed	intrn	480496	480708	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	480496	480708	237	+	.	.
scaffold1737	subtractBed	intrn	483016	483131	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	483016	483131	78	+	.	.
scaffold1737	subtractBed	intrn	492166	492213	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	492166	492213	96	+	.	.
scaffold1737	subtractBed	intrn	492550	493031	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	492550	493031	910	+	.	.
scaffold1737	subtractBed	intrn	494229	494277	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	494229	494277	98	+	.	.
scaffold1737	subtractBed	intrn	497969	498555	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	497969	498555	915	+	.	.
scaffold1737	subtractBed	intrn	499083	500010	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	499083	500010	1404	+	.	.
scaffold1737	subtractBed	intrn	500930	501173	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	500930	501173	317	+	.	.
scaffold1737	subtractBed	intrn	503524	504749	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	503524	504749	1471	+	.	.
scaffold1737	subtractBed	intrn	503524	504749	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	503524	504749	1490	+	.	.
scaffold1737	subtractBed	intrn	510758	511550	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	510758	511550	1202	+	.	.
scaffold1737	subtractBed	intrn	512172	512364	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	512172	512385	428	+	.	.
scaffold1737	subtractBed	intrn	517196	518397	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	517172	518397	1297	+	.	.
scaffold1737	subtractBed	intrn	518719	519883	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	518690	519883	1330	+	.	.
scaffold1737	subtractBed	intrn	522295	522497	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	522295	522517	437	+	.	.
scaffold1737	subtractBed	intrn	525423	525862	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	525423	525862	605	+	.	.
scaffold1737	subtractBed	intrn	525423	525862	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	525423	525862	603	+	.	.
scaffold1737	subtractBed	intrn	526891	527830	.	-	.	Parent=CGI_10018256;
	scaffold1737	TRF	Tandem_Repeat	526891	527830	1302	+	.	.
scaffold1737	subtractBed	intrn	517196	518397	.	+	.	Parent=CGI_10018258;
	scaffold1737	TRF	Tandem_Repeat	517172	518397	1297	+	.	.
scaffold1737	subtractBed	intrn	518719	519883	.	+	.	Parent=CGI_10018258;
	scaffold1737	TRF	Tandem_Repeat	518690	519883	1330	+	.	.
scaffold1737	subtractBed	intrn	522295	522497	.	+	.	Parent=CGI_10018258;
	scaffold1737	TRF	Tandem_Repeat	522295	522517	437	+	.	.
scaffold1738	subtractBed	intrn	93242	93284	.	+	.	Parent=CGI_10008969;
	scaffold1738	TRF	Tandem_Repeat	93242	93284	86	+	.	.
scaffold1738	subtractBed	intrn	103657	103773	.	+	.	Parent=CGI_10008970;
	scaffold1738	WUBlastX	DNA_TcMar-Tc1	103657	103773	31	-	.	.
scaffold1738	subtractBed	intrn	102794	103651	.	+	.	Parent=CGI_10008970;
	scaffold1738	WUBlastX	DNA_TcMar-Tc1	102794	103651	394	-	.	.
scaffold1738	subtractBed	intrn	101851	102192	.	+	.	Parent=CGI_10008970;
	scaffold1738	WUBlastX	LINE_L2	101617	102192	210	+	.	.
scaffold1738	subtractBed	intrn	112653	112686	.	+	.	Parent=CGI_10008970;
	scaffold1738	TRF	Tandem_Repeat	112653	112686	68	+	.	.
scaffold1738	subtractBed	intrn	129166	129190	.	+	.	Parent=CGI_10008972;
	scaffold1738	TRF	Tandem_Repeat	129166	129190	50	+	.	.
scaffold1738	subtractBed	intrn	167039	167088	.	+	.	Parent=CGI_10008974;
	scaffold1738	TRF	Tandem_Repeat	167039	167088	100	+	.	.
scaffold1738	subtractBed	intrn	179978	180121	.	+	.	Parent=CGI_10008974;
	scaffold1738	TRF	Tandem_Repeat	179978	180121	126	+	.	.
scaffold1738	subtractBed	intrn	180916	181027	.	+	.	Parent=CGI_10008974;
	scaffold1738	TRF	Tandem_Repeat	180916	181027	163	+	.	.
scaffold1738	subtractBed	intrn	181204	181253	.	+	.	Parent=CGI_10008974;
	scaffold1738	TRF	Tandem_Repeat	181204	181253	100	+	.	.
scaffold1738	subtractBed	intrn	181285	181336	.	+	.	Parent=CGI_10008974;
	scaffold1738	TRF	Tandem_Repeat	181285	181336	104	+	.	.
scaffold174	subtractBed	intrn	76211	76266	.	+	.	Parent=CGI_10007097;
	scaffold174	TRF	Tandem_Repeat	76211	76266	112	+	.	.
scaffold174	subtractBed	intrn	76858	76891	.	+	.	Parent=CGI_10007097;
	scaffold174	TRF	Tandem_Repeat	76858	76891	52	+	.	.
scaffold174	subtractBed	intrn	80014	80061	.	+	.	Parent=CGI_10007097;
	scaffold174	TRF	Tandem_Repeat	80014	80061	96	+	.	.
scaffold174	subtractBed	intrn	112970	113032	.	+	.	Parent=CGI_10007098;
	scaffold174	TRF	Tandem_Repeat	112970	113032	126	+	.	.
scaffold1740	subtractBed	intrn	30710	30850	.	-	.	Parent=CGI_10011442;
	scaffold1740	TRF	Tandem_Repeat	30710	30850	129	+	.	.
scaffold1740	subtractBed	intrn	51695	52180	.	-	.	Parent=CGI_10011443;
	scaffold1740	WUBlastX	LTR_Gypsy	51695	52180	123	+	.	.
scaffold1740	subtractBed	intrn	185766	185815	.	-	.	Parent=CGI_10011447;
	scaffold1740	TRF	Tandem_Repeat	185766	185815	100	+	.	.
scaffold1740	subtractBed	intrn	209023	209023	.	-	.	Parent=CGI_10011449;
	scaffold1740	WUBlastX	DNA_Sola	209023	209190	74	-	.	.
scaffold1740	subtractBed	intrn	209811	209833	.	-	.	Parent=CGI_10011449;
	scaffold1740	WUBlastX	DNA_Sola	209811	210110	22	-	.	.
scaffold1740	subtractBed	intrn	210109	210110	.	-	.	Parent=CGI_10011449;
	scaffold1740	WUBlastX	DNA_Sola	209811	210110	22	-	.	.
scaffold1740	subtractBed	intrn	251159	251458	.	+	.	Parent=CGI_10011450;
	scaffold1740	WUBlastX	DNA_NOF?	251159	251458	71	-	.	.
scaffold1741	subtractBed	intrn	112319	112383	.	-	.	Parent=CGI_10024023;
	scaffold1741	TRF	Tandem_Repeat	112319	112383	62	+	.	.
scaffold1741	subtractBed	intrn	186465	186546	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	186465	186546	125	+	.	.
scaffold1741	subtractBed	intrn	187212	187332	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	187212	187332	127	+	.	.
scaffold1741	subtractBed	intrn	191340	191373	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	191340	191373	59	+	.	.
scaffold1741	subtractBed	intrn	193811	193915	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	193811	193915	97	+	.	.
scaffold1741	subtractBed	intrn	195233	195267	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	195233	195267	70	+	.	.
scaffold1741	subtractBed	intrn	197349	197421	.	+	.	Parent=CGI_10024026;
	scaffold1741	TRF	Tandem_Repeat	197349	197421	92	+	.	.
scaffold1741	subtractBed	intrn	213943	213990	.	-	.	Parent=CGI_10024028;
	scaffold1741	TRF	Tandem_Repeat	213943	213990	96	+	.	.
scaffold1741	subtractBed	intrn	214863	214907	.	-	.	Parent=CGI_10024028;
	scaffold1741	TRF	Tandem_Repeat	214863	214907	90	+	.	.
scaffold1741	subtractBed	intrn	227427	227478	.	+	.	Parent=CGI_10024029;
	scaffold1741	TRF	Tandem_Repeat	227427	227478	104	+	.	.
scaffold1741	subtractBed	intrn	228994	229032	.	+	.	Parent=CGI_10024029;
	scaffold1741	TRF	Tandem_Repeat	228994	229032	78	+	.	.
scaffold1741	subtractBed	intrn	229415	229476	.	+	.	Parent=CGI_10024029;
	scaffold1741	TRF	Tandem_Repeat	229415	229476	115	+	.	.
scaffold1741	subtractBed	intrn	244642	244736	.	+	.	Parent=CGI_10024031;
	scaffold1741	TRF	Tandem_Repeat	244642	244736	124	+	.	.
scaffold1741	subtractBed	intrn	245852	245917	.	+	.	Parent=CGI_10024031;
	scaffold1741	TRF	Tandem_Repeat	245852	245917	123	+	.	.
scaffold1741	subtractBed	intrn	252844	252887	.	+	.	Parent=CGI_10024032;
	scaffold1741	TRF	Tandem_Repeat	252844	252887	52	+	.	.
scaffold1741	subtractBed	intrn	257408	257486	.	+	.	Parent=CGI_10024033;
	scaffold1741	TRF	Tandem_Repeat	257408	257486	68	+	.	.
scaffold1741	subtractBed	intrn	258890	258981	.	+	.	Parent=CGI_10024033;
	scaffold1741	TRF	Tandem_Repeat	258890	258981	139	+	.	.
scaffold1741	subtractBed	intrn	258985	259023	.	+	.	Parent=CGI_10024033;
	scaffold1741	TRF	Tandem_Repeat	258985	259023	69	+	.	.
scaffold1741	subtractBed	intrn	370644	370716	.	+	.	Parent=CGI_10024036;
	scaffold1741	TRF	Tandem_Repeat	370644	370716	146	+	.	.
scaffold1741	subtractBed	intrn	383668	383720	.	+	.	Parent=CGI_10024036;
	scaffold1741	TRF	Tandem_Repeat	383668	383720	106	+	.	.
scaffold1741	subtractBed	intrn	384453	384508	.	+	.	Parent=CGI_10024036;
	scaffold1741	TRF	Tandem_Repeat	384453	384508	112	+	.	.
scaffold1741	subtractBed	intrn	388730	388773	.	+	.	Parent=CGI_10024036;
	scaffold1741	TRF	Tandem_Repeat	388730	388773	61	+	.	.
scaffold1741	subtractBed	intrn	393651	394890	.	+	.	Parent=CGI_10024037;
	scaffold1741	TRF	Tandem_Repeat	393651	394890	1545	+	.	.
scaffold1741	subtractBed	intrn	401126	401183	.	+	.	Parent=CGI_10024037;
	scaffold1741	TRF	Tandem_Repeat	401126	401183	116	+	.	.
scaffold1741	subtractBed	intrn	407828	407866	.	-	.	Parent=CGI_10024038;
	scaffold1741	TRF	Tandem_Repeat	407828	407866	78	+	.	.
scaffold1741	subtractBed	intrn	455786	457199	.	-	.	Parent=CGI_10024040;
	scaffold1741	TRF	Tandem_Repeat	455786	457199	1264	+	.	.
scaffold1741	subtractBed	intrn	456386	457199	.	-	.	Parent=CGI_10024040;
	scaffold1741	TRF	Tandem_Repeat	456386	457199	754	+	.	.
scaffold1741	subtractBed	intrn	475793	475929	.	-	.	Parent=CGI_10024041;
	scaffold1741	TRF	Tandem_Repeat	475793	475929	184	+	.	.
scaffold1741	subtractBed	intrn	476157	476278	.	-	.	Parent=CGI_10024041;
	scaffold1741	TRF	Tandem_Repeat	476157	476278	118	+	.	.
scaffold1741	subtractBed	intrn	476548	476639	.	-	.	Parent=CGI_10024041;
	scaffold1741	TRF	Tandem_Repeat	476548	476639	103	+	.	.
scaffold1741	subtractBed	intrn	478743	478782	.	-	.	Parent=CGI_10024041;
	scaffold1741	TRF	Tandem_Repeat	478743	478782	80	+	.	.
scaffold1741	subtractBed	intrn	512253	513322	.	-	.	Parent=CGI_10024043;
	scaffold1741	TRF	Tandem_Repeat	512253	513322	1525	+	.	.
scaffold1741	subtractBed	intrn	515194	515241	.	-	.	Parent=CGI_10024043;
	scaffold1741	TRF	Tandem_Repeat	515194	515241	96	+	.	.
scaffold1741	subtractBed	intrn	517241	517322	.	-	.	Parent=CGI_10024043;
	scaffold1741	TRF	Tandem_Repeat	517241	517322	155	+	.	.
scaffold1741	subtractBed	intrn	531534	531770	.	+	.	Parent=CGI_10024044;
	scaffold1741	TRF	Tandem_Repeat	531534	531770	325	+	.	.
scaffold1741	subtractBed	intrn	536404	536543	.	+	.	Parent=CGI_10024044;
	scaffold1741	TRF	Tandem_Repeat	536404	536543	121	+	.	.
scaffold1741	subtractBed	intrn	537021	537112	.	+	.	Parent=CGI_10024044;
	scaffold1741	TRF	Tandem_Repeat	537021	537112	112	+	.	.
scaffold1741	subtractBed	intrn	541034	541289	.	+	.	Parent=CGI_10024044;
	scaffold1741	TRF	Tandem_Repeat	541034	541289	379	+	.	.
scaffold1741	subtractBed	intrn	548762	548788	.	+	.	Parent=CGI_10024044;
	scaffold1741	TRF	Tandem_Repeat	548762	548788	54	+	.	.
scaffold1741	subtractBed	intrn	566205	566244	.	+	.	Parent=CGI_10024045;
	scaffold1741	TRF	Tandem_Repeat	566205	566244	80	+	.	.
scaffold1741	subtractBed	intrn	566714	566877	.	+	.	Parent=CGI_10024045;
	scaffold1741	TRF	Tandem_Repeat	566714	566877	328	+	.	.
scaffold1741	subtractBed	intrn	577247	577343	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	577247	577343	160	+	.	.
scaffold1741	subtractBed	intrn	577247	577341	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	577247	577341	144	+	.	.
scaffold1741	subtractBed	intrn	578072	578229	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	578072	578229	179	+	.	.
scaffold1741	subtractBed	intrn	578070	578229	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	578070	578229	184	+	.	.
scaffold1741	subtractBed	intrn	587713	587724	.	+	.	Parent=CGI_10024047;
	scaffold1741	WUBlastX	RC_Helitron	587713	587763	22	+	.	.
scaffold1741	subtractBed	intrn	605687	605767	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	605687	605767	74	+	.	.
scaffold1741	subtractBed	intrn	605687	605767	.	+	.	Parent=CGI_10024047;
	scaffold1741	TRF	Tandem_Repeat	605687	605767	74	+	.	.
scaffold1741	subtractBed	intrn	788624	788904	.	+	.	Parent=CGI_10024051;
	scaffold1741	TRF	Tandem_Repeat	788604	788904	449	+	.	.
scaffold1741	subtractBed	intrn	795507	795674	.	+	.	Parent=CGI_10024051;
	scaffold1741	TRF	Tandem_Repeat	795507	795674	264	+	.	.
scaffold1741	subtractBed	intrn	805806	805839	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	805806	805839	68	+	.	.
scaffold1741	subtractBed	intrn	809023	809063	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	809023	809063	64	+	.	.
scaffold1741	subtractBed	intrn	809230	809662	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	809230	809662	473	+	.	.
scaffold1741	subtractBed	intrn	809198	809609	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	809198	809609	531	+	.	.
scaffold1741	subtractBed	intrn	817617	817743	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	817617	817743	105	+	.	.
scaffold1741	subtractBed	intrn	817607	817811	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	817607	817811	331	+	.	.
scaffold1741	subtractBed	intrn	818330	818454	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	818330	818454	94	+	.	.
scaffold1741	subtractBed	intrn	818282	818464	.	-	.	Parent=CGI_10024052;
	scaffold1741	TRF	Tandem_Repeat	818282	818464	133	+	.	.
scaffold1741	subtractBed	intrn	813354	813485	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	813354	813485	28	-	.	.
scaffold1741	subtractBed	intrn	813748	814041	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	813748	814041	104	-	.	.
scaffold1741	subtractBed	intrn	814123	814320	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	814123	814320	117	-	.	.
scaffold1741	subtractBed	intrn	814416	815336	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	814416	815336	230	-	.	.
scaffold1741	subtractBed	intrn	813300	813458	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	813300	813458	98	-	.	.
scaffold1741	subtractBed	intrn	815715	815915	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_IS4EU	815715	815915	91	-	.	.
scaffold1741	subtractBed	intrn	813537	813716	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	813537	813716	77	-	.	.
scaffold1741	subtractBed	intrn	814132	814386	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	814132	814386	51	-	.	.
scaffold1741	subtractBed	intrn	815598	815912	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_P	815598	815912	82	-	.	.
scaffold1741	subtractBed	intrn	812731	812898	.	-	.	Parent=CGI_10024052;
	scaffold1741	WUBlastX	DNA_Kolobok	812731	812898	84	+	.	.
scaffold1741	subtractBed	intrn	830109	830198	.	-	.	Parent=CGI_10024054;
	scaffold1741	TRF	Tandem_Repeat	830109	830198	63	+	.	.
scaffold1741	subtractBed	intrn	835690	835740	.	-	.	Parent=CGI_10024056;
	scaffold1741	TRF	Tandem_Repeat	835690	835740	102	+	.	.
scaffold1741	subtractBed	intrn	837396	837553	.	-	.	Parent=CGI_10024056;
	scaffold1741	TRF	Tandem_Repeat	837396	837553	138	+	.	.
scaffold1741	subtractBed	intrn	837379	837553	.	-	.	Parent=CGI_10024056;
	scaffold1741	TRF	Tandem_Repeat	837379	837553	129	+	.	.
scaffold1741	subtractBed	intrn	858332	858382	.	+	.	Parent=CGI_10024057;
	scaffold1741	TRF	Tandem_Repeat	858332	858382	102	+	.	.
scaffold1741	subtractBed	intrn	893501	893813	.	+	.	Parent=CGI_10024058;
	scaffold1741	TRF	Tandem_Repeat	893501	893813	197	+	.	.
scaffold1741	subtractBed	intrn	893501	893810	.	+	.	Parent=CGI_10024058;
	scaffold1741	TRF	Tandem_Repeat	893501	893810	195	+	.	.
scaffold1741	subtractBed	intrn	893501	893813	.	+	.	Parent=CGI_10024058;
	scaffold1741	TRF	Tandem_Repeat	893501	893813	174	+	.	.
scaffold1741	subtractBed	intrn	893949	894069	.	+	.	Parent=CGI_10024058;
	scaffold1741	TRF	Tandem_Repeat	893949	894069	84	+	.	.
scaffold1742	subtractBed	intrn	17889	17927	.	+	.	Parent=CGI_10010930;
	scaffold1742	TRF	Tandem_Repeat	17889	17927	78	+	.	.
scaffold1742	subtractBed	intrn	27708	27741	.	-	.	Parent=CGI_10010931;
	scaffold1742	TRF	Tandem_Repeat	27708	27741	61	+	.	.
scaffold1742	subtractBed	intrn	86359	86431	.	-	.	Parent=CGI_10010933;
	scaffold1742	TRF	Tandem_Repeat	86359	86431	137	+	.	.
scaffold1742	subtractBed	intrn	87907	87950	.	-	.	Parent=CGI_10010933;
	scaffold1742	TRF	Tandem_Repeat	87907	87950	88	+	.	.
scaffold1742	subtractBed	intrn	140235	140597	.	-	.	Parent=CGI_10010934;
	scaffold1742	WUBlastX	DNA_Harbinger	140235	140597	62	-	.	.
scaffold1742	subtractBed	intrn	140734	141108	.	-	.	Parent=CGI_10010934;
	scaffold1742	WUBlastX	DNA_Harbinger	140734	141108	127	-	.	.
scaffold1742	subtractBed	intrn	140366	141202	.	-	.	Parent=CGI_10010934;
	scaffold1742	WUBlastX	DNA_Harbinger	140366	141202	79	-	.	.
scaffold1742	subtractBed	intrn	193126	193410	.	+	.	Parent=CGI_10010940;
	scaffold1742	TRF	Tandem_Repeat	193126	193410	419	+	.	.
scaffold1742	subtractBed	intrn	200115	200314	.	+	.	Parent=CGI_10010940;
	scaffold1742	TRF	Tandem_Repeat	200115	200314	382	+	.	.
scaffold1742	subtractBed	intrn	206893	207104	.	+	.	Parent=CGI_10010940;
	scaffold1742	TRF	Tandem_Repeat	206893	207104	306	+	.	.
scaffold1742	subtractBed	intrn	222830	222885	.	+	.	Parent=CGI_10010941;
	scaffold1742	TRF	Tandem_Repeat	222830	222885	105	+	.	.
scaffold1742	subtractBed	intrn	229918	229996	.	+	.	Parent=CGI_10010941;
	scaffold1742	TRF	Tandem_Repeat	229918	229996	149	+	.	.
scaffold1742	subtractBed	intrn	265839	265912	.	-	.	Parent=CGI_10010947;
	scaffold1742	TRF	Tandem_Repeat	265839	265912	103	+	.	.
scaffold1743	subtractBed	intrn	50057	50242	.	+	.	Parent=CGI_10011653;
	scaffold1743	WUBlastX	LINE_RTE-X	50057	50242	66	+	.	.
scaffold1743	subtractBed	intrn	49985	50233	.	+	.	Parent=CGI_10011653;
	scaffold1743	WUBlastX	LINE_RTE-X	49985	50233	59	+	.	.
scaffold1743	subtractBed	intrn	151600	151998	.	-	.	Parent=CGI_10011655;
	scaffold1743	WUBlastX	LTR_Ngaro	151600	151998	110	-	.	.
scaffold1743	subtractBed	intrn	200538	201311	.	-	.	Parent=CGI_10011656;
	scaffold1743	TRF	Tandem_Repeat	200538	201311	950	+	.	.
scaffold1743	subtractBed	intrn	207431	207870	.	+	.	Parent=CGI_10011657;
	scaffold1743	WUBlastX	DNA_hAT-Blackja	207142	207870	133	+	.	.
scaffold1743	subtractBed	intrn	207431	208080	.	+	.	Parent=CGI_10011657;
	scaffold1743	WUBlastX	DNA_hAT-Charlie	207043	208080	28	+	.	.
scaffold1743	subtractBed	intrn	233965	234378	.	-	.	Parent=CGI_10011658;
	scaffold1743	WUBlastX	LINE_RTE-X	233965	234378	49	-	.	.
scaffold1743	subtractBed	intrn	233893	234198	.	-	.	Parent=CGI_10011658;
	scaffold1743	WUBlastX	LINE_RTE-X	233893	234198	23	-	.	.
scaffold1743	subtractBed	intrn	233986	234471	.	-	.	Parent=CGI_10011658;
	scaffold1743	WUBlastX	LINE_RTE-X	233986	234471	41	-	.	.
scaffold1745	subtractBed	intrn	22531	22557	.	+	.	Parent=CGI_10005403;
	scaffold1745	TRF	Tandem_Repeat	22531	22557	54	+	.	.
scaffold1745	subtractBed	intrn	28801	28856	.	+	.	Parent=CGI_10005403;
	scaffold1745	TRF	Tandem_Repeat	28801	28856	67	+	.	.
scaffold1745	subtractBed	intrn	28797	28878	.	+	.	Parent=CGI_10005403;
	scaffold1745	TRF	Tandem_Repeat	28797	28878	56	+	.	.
scaffold1745	subtractBed	intrn	34975	35214	.	-	.	Parent=CGI_10005404;
	scaffold1745	WUBlastX	LINE_RTE-X	34975	35214	39	-	.	.
scaffold1745	subtractBed	intrn	36116	36183	.	-	.	Parent=CGI_10005404;
	scaffold1745	TRF	Tandem_Repeat	36116	36183	136	+	.	.
scaffold1745	subtractBed	intrn	38118	38196	.	-	.	Parent=CGI_10005404;
	scaffold1745	TRF	Tandem_Repeat	38118	38196	158	+	.	.
scaffold1745	subtractBed	intrn	44483	44562	.	-	.	Parent=CGI_10005404;
	scaffold1745	TRF	Tandem_Repeat	44483	44562	151	+	.	.
scaffold1745	subtractBed	intrn	45457	45524	.	-	.	Parent=CGI_10005404;
	scaffold1745	TRF	Tandem_Repeat	45457	45524	82	+	.	.
scaffold1745	subtractBed	intrn	79271	79618	.	+	.	Parent=CGI_10005405;
	scaffold1745	WUBlastX	LINE_RTE-X	79271	79618	49	-	.	.
scaffold1745	subtractBed	intrn	79241	79411	.	+	.	Parent=CGI_10005405;
	scaffold1745	WUBlastX	LINE_RTE-X	79241	79411	93	-	.	.
scaffold1745	subtractBed	intrn	79268	79489	.	+	.	Parent=CGI_10005405;
	scaffold1745	WUBlastX	LINE_RTE-X	79268	79489	66	-	.	.
scaffold1745	subtractBed	intrn	90537	90584	.	+	.	Parent=CGI_10005405;
	scaffold1745	TRF	Tandem_Repeat	90537	90584	60	+	.	.
scaffold1745	subtractBed	intrn	113400	113449	.	-	.	Parent=CGI_10005406;
	scaffold1745	TRF	Tandem_Repeat	113400	113449	100	+	.	.
scaffold1745	subtractBed	intrn	118433	118621	.	-	.	Parent=CGI_10005406;
	scaffold1745	WUBlastX	LTR_Ngaro	118433	118621	145	+	.	.
scaffold1745	subtractBed	intrn	118337	118597	.	-	.	Parent=CGI_10005406;
	scaffold1745	WUBlastX	LTR_Ngaro	118337	118597	83	+	.	.
scaffold1745	subtractBed	intrn	118140	118388	.	-	.	Parent=CGI_10005406;
	scaffold1745	WUBlastX	LTR_Ngaro	118140	118388	41	+	.	.
scaffold1745	subtractBed	intrn	118382	118606	.	-	.	Parent=CGI_10005406;
	scaffold1745	WUBlastX	LTR_Ngaro	118382	118606	137	+	.	.
scaffold1746	subtractBed	intrn	48210	48623	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	48210	48623	666	+	.	.
scaffold1746	subtractBed	intrn	50603	50982	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	50603	50982	543	+	.	.
scaffold1746	subtractBed	intrn	54853	54954	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	54853	54954	127	+	.	.
scaffold1746	subtractBed	intrn	56570	57421	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	56570	57421	961	+	.	.
scaffold1746	subtractBed	intrn	64702	65149	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	64702	65149	589	+	.	.
scaffold1746	subtractBed	intrn	66485	66755	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	66485	66755	428	+	.	.
scaffold1746	subtractBed	intrn	72302	72471	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	72302	72471	200	+	.	.
scaffold1746	subtractBed	intrn	72382	72489	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	72382	72489	126	+	.	.
scaffold1746	subtractBed	intrn	74319	74755	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	74319	74755	743	+	.	.
scaffold1746	subtractBed	intrn	83304	83332	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	83304	83332	58	+	.	.
scaffold1746	subtractBed	intrn	84789	84837	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	84789	84837	98	+	.	.
scaffold1746	subtractBed	intrn	88518	88562	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	88518	88562	90	+	.	.
scaffold1746	subtractBed	intrn	91868	91914	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	91868	91914	94	+	.	.
scaffold1746	subtractBed	intrn	99689	100668	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	99689	100668	1220	+	.	.
scaffold1746	subtractBed	intrn	106756	107819	.	+	.	Parent=CGI_10007280;
	scaffold1746	TRF	Tandem_Repeat	106756	107819	1611	+	.	.
scaffold1746	subtractBed	intrn	116347	117455	.	+	.	Parent=CGI_10007281;
	scaffold1746	TRF	Tandem_Repeat	116347	117455	1330	+	.	.
scaffold1746	subtractBed	intrn	116347	117455	.	+	.	Parent=CGI_10007281;
	scaffold1746	TRF	Tandem_Repeat	116347	117455	1097	+	.	.
scaffold1747	subtractBed	intrn	74640	75028	.	-	.	Parent=CGI_10004402;
	scaffold1747	TRF	Tandem_Repeat	74640	75063	533	+	.	.
scaffold1748	subtractBed	intrn	16230	16280	.	-	.	Parent=CGI_10002254;
	scaffold1748	TRF	Tandem_Repeat	16230	16280	102	+	.	.
scaffold1748	subtractBed	intrn	20531	20571	.	-	.	Parent=CGI_10002254;
	scaffold1748	TRF	Tandem_Repeat	20531	20571	82	+	.	.
scaffold1748	subtractBed	intrn	20735	20798	.	-	.	Parent=CGI_10002254;
	scaffold1748	TRF	Tandem_Repeat	20735	20798	128	+	.	.
scaffold1748	subtractBed	intrn	20531	20571	.	+	.	Parent=CGI_10002255;
	scaffold1748	TRF	Tandem_Repeat	20531	20571	82	+	.	.
scaffold1748	subtractBed	intrn	20735	20798	.	+	.	Parent=CGI_10002255;
	scaffold1748	TRF	Tandem_Repeat	20735	20798	128	+	.	.
scaffold1748	subtractBed	intrn	22867	22920	.	+	.	Parent=CGI_10002255;
	scaffold1748	TRF	Tandem_Repeat	22867	22920	99	+	.	.
scaffold1748	subtractBed	intrn	22677	22844	.	+	.	Parent=CGI_10002255;
	scaffold1748	WUBlastX	LINE_L2	22677	22844	39	-	.	.
scaffold1748	subtractBed	intrn	22722	22844	.	+	.	Parent=CGI_10002255;
	scaffold1748	WUBlastX	LINE_L2	22722	22844	103	-	.	.
scaffold1748	subtractBed	intrn	31937	32019	.	+	.	Parent=CGI_10002256;
	scaffold1748	TRF	Tandem_Repeat	31937	32019	93	+	.	.
scaffold1748	subtractBed	intrn	36175	36209	.	+	.	Parent=CGI_10002256;
	scaffold1748	TRF	Tandem_Repeat	36175	36209	70	+	.	.
scaffold1749	subtractBed	intrn	93935	94162	.	-	.	Parent=CGI_10008254;
	scaffold1749	WUBlastX	LTR_DIRS	93935	94162	124	-	.	.
scaffold1749	subtractBed	intrn	94233	94463	.	-	.	Parent=CGI_10008254;
	scaffold1749	WUBlastX	LTR_DIRS	94233	94463	76	-	.	.
scaffold1749	subtractBed	intrn	93875	94213	.	-	.	Parent=CGI_10008254;
	scaffold1749	WUBlastX	LTR_DIRS	93875	94213	115	-	.	.
scaffold1749	subtractBed	intrn	93800	94207	.	-	.	Parent=CGI_10008254;
	scaffold1749	WUBlastX	LTR_DIRS	93800	94207	109	-	.	.
scaffold1749	subtractBed	intrn	94233	94514	.	-	.	Parent=CGI_10008254;
	scaffold1749	WUBlastX	LTR_DIRS	94233	94514	31	-	.	.
scaffold1749	subtractBed	intrn	109577	109813	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	109577	109813	130	+	.	.
scaffold1749	subtractBed	intrn	108579	108878	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	108579	108878	197	+	.	.
scaffold1749	subtractBed	intrn	108963	109409	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	108963	109409	334	+	.	.
scaffold1749	subtractBed	intrn	106725	106877	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	106725	106877	88	-	.	.
scaffold1749	subtractBed	intrn	109465	109620	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	109465	109620	66	+	.	.
scaffold1749	subtractBed	intrn	106322	106669	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	106322	106669	208	-	.	.
scaffold1749	subtractBed	intrn	109495	109620	.	+	.	Parent=CGI_10008256;
	scaffold1749	WUBlastX	DNA_Maverick	109495	109620	68	+	.	.
scaffold1749	subtractBed	intrn	114626	114915	.	+	.	Parent=CGI_10008256;
	scaffold1749	TRF	Tandem_Repeat	114626	114915	492	+	.	.
scaffold1749	subtractBed	intrn	164160	164213	.	+	.	Parent=CGI_10008259;
	scaffold1749	TRF	Tandem_Repeat	164160	164213	90	+	.	.
scaffold1749	subtractBed	intrn	173784	174224	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	173784	174224	65	-	.	.
scaffold1749	subtractBed	intrn	173871	174233	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	173871	174233	79	-	.	.
scaffold1749	subtractBed	intrn	174445	174771	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	174445	174771	52	-	.	.
scaffold1749	subtractBed	intrn	173910	174092	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	173910	174092	81	-	.	.
scaffold1749	subtractBed	intrn	174232	174705	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	174232	174705	205	-	.	.
scaffold1749	subtractBed	intrn	173919	174215	.	+	.	Parent=CGI_10008260;
	scaffold1749	WUBlastX	LINE_RTE-X	173919	174215	81	-	.	.
scaffold1749	subtractBed	intrn	188669	189363	.	+	.	Parent=CGI_10008262;
	scaffold1749	TRF	Tandem_Repeat	188669	189363	839	+	.	.
scaffold1749	subtractBed	intrn	196652	196707	.	+	.	Parent=CGI_10008262;
	scaffold1749	TRF	Tandem_Repeat	196652	196707	103	+	.	.
scaffold175	subtractBed	intrn	89134	89208	.	+	.	Parent=CGI_10021306;
	scaffold175	TRF	Tandem_Repeat	89134	89208	118	+	.	.
scaffold175	subtractBed	intrn	112066	112172	.	+	.	Parent=CGI_10021308;
	scaffold175	TRF	Tandem_Repeat	112066	112172	80	+	.	.
scaffold175	subtractBed	intrn	113249	113280	.	+	.	Parent=CGI_10021308;
	scaffold175	TRF	Tandem_Repeat	113249	113280	64	+	.	.
scaffold175	subtractBed	intrn	118292	118336	.	+	.	Parent=CGI_10021308;
	scaffold175	TRF	Tandem_Repeat	118292	118336	72	+	.	.
scaffold175	subtractBed	intrn	121445	121474	.	+	.	Parent=CGI_10021308;
	scaffold175	TRF	Tandem_Repeat	121445	121474	60	+	.	.
scaffold175	subtractBed	intrn	160311	161189	.	+	.	Parent=CGI_10021311;
	scaffold175	WUBlastX	LINE_Penelope	160311	161189	79	+	.	.
scaffold175	subtractBed	intrn	160455	161198	.	+	.	Parent=CGI_10021311;
	scaffold175	WUBlastX	LINE_Penelope	160455	161198	274	+	.	.
scaffold175	subtractBed	intrn	179167	180891	.	+	.	Parent=CGI_10021312;
	scaffold175	TRF	Tandem_Repeat	179167	180891	2114	+	.	.
scaffold175	subtractBed	intrn	195536	195573	.	+	.	Parent=CGI_10021314;
	scaffold175	TRF	Tandem_Repeat	195536	195573	51	+	.	.
scaffold175	subtractBed	intrn	195770	196768	.	+	.	Parent=CGI_10021314;
	scaffold175	TRF	Tandem_Repeat	195770	196768	1261	+	.	.
scaffold175	subtractBed	intrn	244129	245274	.	+	.	Parent=CGI_10021317;
	scaffold175	WUBlastX	LINE_L1	244129	245274	450	+	.	.
scaffold175	subtractBed	intrn	246939	247727	.	+	.	Parent=CGI_10021317;
	scaffold175	WUBlastX	LINE_L1-Tx1	246939	247727	79	+	.	.
scaffold175	subtractBed	intrn	245267	246748	.	+	.	Parent=CGI_10021317;
	scaffold175	WUBlastX	LINE_L1	245267	246748	836	+	.	.
scaffold175	subtractBed	intrn	310880	310950	.	+	.	Parent=CGI_10021318;
	scaffold175	TRF	Tandem_Repeat	310880	310950	115	+	.	.
scaffold175	subtractBed	intrn	309251	309415	.	+	.	Parent=CGI_10021318;
	scaffold175	WUBlastX	LINE_RTE-X	309251	309415	71	+	.	.
scaffold175	subtractBed	intrn	311780	312407	.	+	.	Parent=CGI_10021318;
	scaffold175	TRF	Tandem_Repeat	311780	312407	854	+	.	.
scaffold175	subtractBed	intrn	326270	326391	.	-	.	Parent=CGI_10021321;
	scaffold175	TRF	Tandem_Repeat	326270	326391	208	+	.	.
scaffold175	subtractBed	intrn	329677	330171	.	-	.	Parent=CGI_10021321;
	scaffold175	WUBlastX	LINE_Penelope	329677	330171	94	+	.	.
scaffold175	subtractBed	intrn	368169	368218	.	+	.	Parent=CGI_10021323;
	scaffold175	TRF	Tandem_Repeat	368169	368218	82	+	.	.
scaffold175	subtractBed	intrn	377469	377554	.	+	.	Parent=CGI_10021324;
	scaffold175	TRF	Tandem_Repeat	377469	377554	100	+	.	.
scaffold175	subtractBed	intrn	394435	394470	.	+	.	Parent=CGI_10021326;
	scaffold175	TRF	Tandem_Repeat	394435	394470	63	+	.	.
scaffold175	subtractBed	intrn	396288	396334	.	+	.	Parent=CGI_10021326;
	scaffold175	TRF	Tandem_Repeat	396288	396334	94	+	.	.
scaffold175	subtractBed	intrn	408951	409221	.	+	.	Parent=CGI_10021327;
	scaffold175	TRF	Tandem_Repeat	408951	409221	348	+	.	.
scaffold175	subtractBed	intrn	420572	420633	.	+	.	Parent=CGI_10021328;
	scaffold175	TRF	Tandem_Repeat	420572	420633	124	+	.	.
scaffold175	subtractBed	intrn	433382	434491	.	-	.	Parent=CGI_10021330;
	scaffold175	TRF	Tandem_Repeat	433382	434522	1570	+	.	.
scaffold175	subtractBed	intrn	444495	444783	.	+	.	Parent=CGI_10021331;
	scaffold175	TRF	Tandem_Repeat	444495	444783	353	+	.	.
scaffold175	subtractBed	intrn	444495	444817	.	+	.	Parent=CGI_10021331;
	scaffold175	TRF	Tandem_Repeat	444495	444817	229	+	.	.
scaffold175	subtractBed	intrn	444716	444797	.	+	.	Parent=CGI_10021331;
	scaffold175	TRF	Tandem_Repeat	444716	444797	110	+	.	.
scaffold175	subtractBed	intrn	446046	446722	.	+	.	Parent=CGI_10021331;
	scaffold175	TRF	Tandem_Repeat	446046	446722	1087	+	.	.
scaffold175	subtractBed	intrn	457613	457733	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	457613	457733	75	+	.	.
scaffold175	subtractBed	intrn	457621	457838	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	457621	457838	235	+	.	.
scaffold175	subtractBed	intrn	457646	457839	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	457646	457839	141	+	.	.
scaffold175	subtractBed	intrn	457646	457877	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	457646	457877	252	+	.	.
scaffold175	subtractBed	intrn	457682	457877	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	457682	457877	150	+	.	.
scaffold175	subtractBed	intrn	463654	463720	.	+	.	Parent=CGI_10021333;
	scaffold175	TRF	Tandem_Repeat	463654	463720	134	+	.	.
scaffold175	subtractBed	intrn	476813	477712	.	-	.	Parent=CGI_10021334;
	scaffold175	WUBlastX	DNA_IS4EU	476813	477712	104	-	.	.
scaffold175	subtractBed	intrn	476804	477397	.	-	.	Parent=CGI_10021334;
	scaffold175	WUBlastX	DNA_IS4EU	476804	477397	175	-	.	.
scaffold175	subtractBed	intrn	537124	537150	.	-	.	Parent=CGI_10021336;
	scaffold175	TRF	Tandem_Repeat	537124	537150	54	+	.	.
scaffold175	subtractBed	intrn	640572	641814	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	640572	641814	2053	+	.	.
scaffold175	subtractBed	intrn	641981	642034	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	641981	642034	58	+	.	.
scaffold175	subtractBed	intrn	641981	642034	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	641981	642034	58	+	.	.
scaffold175	subtractBed	intrn	642520	642593	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	642520	642593	148	+	.	.
scaffold175	subtractBed	intrn	648259	649051	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	648259	649051	1157	+	.	.
scaffold175	subtractBed	intrn	649220	649258	.	-	.	Parent=CGI_10021337;
	scaffold175	TRF	Tandem_Repeat	649220	649258	60	+	.	.
scaffold1750	subtractBed	intrn	18560	19204	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_RTE-X	18560	19204	282	+	.	.
scaffold1750	subtractBed	intrn	17462	17530	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_Jockey	17462	17530	24	+	.	.
scaffold1750	subtractBed	intrn	17716	17748	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_RTE-X	17716	17748	24	+	.	.
scaffold1750	subtractBed	intrn	17911	18588	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_RTE-X	17911	18588	429	+	.	.
scaffold1750	subtractBed	intrn	19603	19773	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_RTE-X	19603	19773	30	+	.	.
scaffold1750	subtractBed	intrn	18575	19537	.	+	.	Parent=CGI_10021461;
	scaffold1750	WUBlastX	LINE_RTE-X	18575	19537	115	+	.	.
scaffold1750	subtractBed	intrn	46948	47988	.	+	.	Parent=CGI_10021464;
	scaffold1750	TRF	Tandem_Repeat	46948	47988	1171	+	.	.
scaffold1750	subtractBed	intrn	47762	47911	.	+	.	Parent=CGI_10021464;
	scaffold1750	TRF	Tandem_Repeat	47762	47911	72	+	.	.
scaffold1750	subtractBed	intrn	47125	48119	.	+	.	Parent=CGI_10021464;
	scaffold1750	TRF	Tandem_Repeat	47125	48119	685	+	.	.
scaffold1750	subtractBed	intrn	51553	51859	.	+	.	Parent=CGI_10021464;
	scaffold1750	TRF	Tandem_Repeat	51553	51859	434	+	.	.
scaffold1750	subtractBed	intrn	73644	73797	.	-	.	Parent=CGI_10021465;
	scaffold1750	TRF	Tandem_Repeat	73644	73797	299	+	.	.
scaffold1750	subtractBed	intrn	78890	78941	.	+	.	Parent=CGI_10021466;
	scaffold1750	TRF	Tandem_Repeat	78890	78941	104	+	.	.
scaffold1750	subtractBed	intrn	80030	80765	.	+	.	Parent=CGI_10021466;
	scaffold1750	TRF	Tandem_Repeat	80030	80765	676	+	.	.
scaffold1750	subtractBed	intrn	104239	104784	.	+	.	Parent=CGI_10021469;
	scaffold1750	WUBlastX	LINE_RTE-BovB	104239	104784	564	-	.	.
scaffold1750	subtractBed	intrn	109205	109509	.	+	.	Parent=CGI_10021469;
	scaffold1750	TRF	Tandem_Repeat	109196	109509	531	+	.	.
scaffold1750	subtractBed	intrn	136624	137173	.	+	.	Parent=CGI_10021469;
	scaffold1750	TRF	Tandem_Repeat	136588	137173	917	+	.	.
scaffold1750	subtractBed	intrn	136803	136904	.	+	.	Parent=CGI_10021469;
	scaffold1750	TRF	Tandem_Repeat	136803	136904	54	+	.	.
scaffold1750	subtractBed	intrn	139784	139828	.	+	.	Parent=CGI_10021469;
	scaffold1750	TRF	Tandem_Repeat	139784	139828	63	+	.	.
scaffold1750	subtractBed	intrn	151418	152042	.	+	.	Parent=CGI_10021471;
	scaffold1750	TRF	Tandem_Repeat	151418	152042	594	+	.	.
scaffold1750	subtractBed	intrn	151438	151544	.	+	.	Parent=CGI_10021471;
	scaffold1750	TRF	Tandem_Repeat	151438	151544	52	+	.	.
scaffold1750	subtractBed	intrn	170482	170520	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	170482	170520	71	+	.	.
scaffold1750	subtractBed	intrn	170745	170781	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	170745	170781	67	+	.	.
scaffold1750	subtractBed	intrn	174999	175295	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	174999	175295	567	+	.	.
scaffold1750	subtractBed	intrn	182009	182944	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	182009	182945	873	+	.	.
scaffold1750	subtractBed	intrn	184877	185080	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	184877	185080	354	+	.	.
scaffold1750	subtractBed	intrn	186455	186711	.	+	.	Parent=CGI_10021472;
	scaffold1750	TRF	Tandem_Repeat	186455	186711	370	+	.	.
scaffold1750	subtractBed	intrn	219710	219754	.	+	.	Parent=CGI_10021474;
	scaffold1750	TRF	Tandem_Repeat	219710	219754	54	+	.	.
scaffold1750	subtractBed	intrn	228727	228799	.	-	.	Parent=CGI_10021475;
	scaffold1750	TRF	Tandem_Repeat	228727	228799	87	+	.	.
scaffold1750	subtractBed	intrn	230903	231088	.	-	.	Parent=CGI_10021475;
	scaffold1750	WUBlastX	DNA_hAT	229822	231213	454	+	.	.
scaffold1750	subtractBed	intrn	231233	231285	.	-	.	Parent=CGI_10021475;
	scaffold1750	TRF	Tandem_Repeat	231233	231285	106	+	.	.
scaffold1750	subtractBed	intrn	231704	231713	.	-	.	Parent=CGI_10021475;
	scaffold1750	WUBlastX	DNA_hAT	231704	231898	100	+	.	.
scaffold1750	subtractBed	intrn	232273	232273	.	-	.	Parent=CGI_10021475;
	scaffold1750	WUBlastX	DNA_hAT	232273	232422	68	+	.	.
scaffold1750	subtractBed	intrn	232757	232784	.	-	.	Parent=CGI_10021475;
	scaffold1750	WUBlastX	DNA_hAT	232757	232900	26	+	.	.
scaffold1750	subtractBed	intrn	232394	232422	.	-	.	Parent=CGI_10021475;
	scaffold1750	WUBlastX	DNA_hAT	232273	232422	68	+	.	.
scaffold1750	subtractBed	intrn	230903	231088	.	+	.	Parent=CGI_10021476;
	scaffold1750	WUBlastX	DNA_hAT	229822	231213	454	+	.	.
scaffold1750	subtractBed	intrn	231233	231285	.	+	.	Parent=CGI_10021476;
	scaffold1750	TRF	Tandem_Repeat	231233	231285	106	+	.	.
scaffold1750	subtractBed	intrn	231704	231713	.	+	.	Parent=CGI_10021476;
	scaffold1750	WUBlastX	DNA_hAT	231704	231898	100	+	.	.
scaffold1750	subtractBed	intrn	232273	232273	.	+	.	Parent=CGI_10021476;
	scaffold1750	WUBlastX	DNA_hAT	232273	232422	68	+	.	.
scaffold1750	subtractBed	intrn	232757	232784	.	+	.	Parent=CGI_10021476;
	scaffold1750	WUBlastX	DNA_hAT	232757	232900	26	+	.	.
scaffold1750	subtractBed	intrn	232394	232422	.	+	.	Parent=CGI_10021476;
	scaffold1750	WUBlastX	DNA_hAT	232273	232422	68	+	.	.
scaffold1750	subtractBed	intrn	243753	244024	.	-	.	Parent=CGI_10021478;
	scaffold1750	TRF	Tandem_Repeat	243753	244024	355	+	.	.
scaffold1750	subtractBed	intrn	258586	258781	.	+	.	Parent=CGI_10021479;
	scaffold1750	TRF	Tandem_Repeat	258586	258781	338	+	.	.
scaffold1750	subtractBed	intrn	267615	267655	.	-	.	Parent=CGI_10021480;
	scaffold1750	TRF	Tandem_Repeat	267615	267655	82	+	.	.
scaffold1750	subtractBed	intrn	278006	278070	.	-	.	Parent=CGI_10021481;
	scaffold1750	TRF	Tandem_Repeat	278006	278070	121	+	.	.
scaffold1750	subtractBed	intrn	294772	295163	.	-	.	Parent=CGI_10021485;
	scaffold1750	TRF	Tandem_Repeat	294772	295163	398	+	.	.
scaffold1750	subtractBed	intrn	294772	295163	.	-	.	Parent=CGI_10021485;
	scaffold1750	TRF	Tandem_Repeat	294772	295163	452	+	.	.
scaffold1750	subtractBed	intrn	297343	297546	.	-	.	Parent=CGI_10021485;
	scaffold1750	TRF	Tandem_Repeat	297343	297546	374	+	.	.
scaffold1750	subtractBed	intrn	298197	298630	.	-	.	Parent=CGI_10021485;
	scaffold1750	TRF	Tandem_Repeat	298197	298630	748	+	.	.
scaffold1750	subtractBed	intrn	304038	304081	.	-	.	Parent=CGI_10021485;
	scaffold1750	TRF	Tandem_Repeat	304038	304081	88	+	.	.
scaffold1750	subtractBed	intrn	432875	432908	.	+	.	Parent=CGI_10021491;
	scaffold1750	TRF	Tandem_Repeat	432875	432908	68	+	.	.
scaffold1750	subtractBed	intrn	449465	449500	.	+	.	Parent=CGI_10021491;
	scaffold1750	TRF	Tandem_Repeat	449465	449500	72	+	.	.
scaffold1750	subtractBed	intrn	459664	459691	.	+	.	Parent=CGI_10021491;
	scaffold1750	TRF	Tandem_Repeat	459664	459691	56	+	.	.
scaffold1750	subtractBed	intrn	508348	508387	.	-	.	Parent=CGI_10021494;
	scaffold1750	TRF	Tandem_Repeat	508348	508387	71	+	.	.
scaffold1750	subtractBed	intrn	509049	509120	.	-	.	Parent=CGI_10021494;
	scaffold1750	TRF	Tandem_Repeat	509049	509120	69	+	.	.
scaffold1750	subtractBed	intrn	509051	509125	.	-	.	Parent=CGI_10021494;
	scaffold1750	TRF	Tandem_Repeat	509051	509125	66	+	.	.
scaffold1750	subtractBed	intrn	520941	521196	.	-	.	Parent=CGI_10021495;
	scaffold1750	TRF	Tandem_Repeat	520941	521196	494	+	.	.
scaffold1750	subtractBed	intrn	523546	524827	.	-	.	Parent=CGI_10021495;
	scaffold1750	TRF	Tandem_Repeat	523546	524827	1688	+	.	.
scaffold1750	subtractBed	intrn	544990	545051	.	-	.	Parent=CGI_10021497;
	scaffold1750	TRF	Tandem_Repeat	544990	545051	124	+	.	.
scaffold1750	subtractBed	intrn	545049	545083	.	-	.	Parent=CGI_10021497;
	scaffold1750	TRF	Tandem_Repeat	545049	545083	70	+	.	.
scaffold1750	subtractBed	intrn	621436	621780	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	621436	621780	318	+	.	.
scaffold1750	subtractBed	intrn	618413	619150	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	618407	619150	29	+	.	.
scaffold1750	subtractBed	intrn	621779	622255	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	621779	622255	374	+	.	.
scaffold1750	subtractBed	intrn	618746	621442	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	618746	621442	965	+	.	.
scaffold1750	subtractBed	intrn	619346	621433	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	619346	621433	1051	+	.	.
scaffold1750	subtractBed	intrn	621779	622342	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	621779	622342	310	+	.	.
scaffold1750	subtractBed	intrn	623235	623312	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	623235	623312	36	+	.	.
scaffold1750	subtractBed	intrn	623305	625314	.	+	.	Parent=CGI_10021499;
	scaffold1750	WUBlastX	LTR_Pao	623305	625314	1514	+	.	.
scaffold1750	subtractBed	intrn	627366	628111	.	+	.	Parent=CGI_10021499;
	scaffold1750	TRF	Tandem_Repeat	627366	628111	1199	+	.	.
scaffold1750	subtractBed	intrn	631031	631135	.	-	.	Parent=CGI_10021500;
	scaffold1750	TRF	Tandem_Repeat	631031	631135	86	+	.	.
scaffold1750	subtractBed	intrn	631039	631134	.	-	.	Parent=CGI_10021500;
	scaffold1750	TRF	Tandem_Repeat	631039	631134	97	+	.	.
scaffold1750	subtractBed	intrn	631039	631122	.	-	.	Parent=CGI_10021500;
	scaffold1750	TRF	Tandem_Repeat	631039	631122	84	+	.	.
scaffold1750	subtractBed	intrn	636768	637001	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	636768	637001	134	+	.	.
scaffold1750	subtractBed	intrn	637025	637318	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637025	637318	113	+	.	.
scaffold1750	subtractBed	intrn	633565	633705	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	633565	633705	29	+	.	.
scaffold1750	subtractBed	intrn	634133	634309	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	634133	634309	36	+	.	.
scaffold1750	subtractBed	intrn	636496	636777	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	636496	636777	216	+	.	.
scaffold1750	subtractBed	intrn	634133	634423	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	634133	634423	32	+	.	.
scaffold1750	subtractBed	intrn	636768	637082	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	636768	637082	126	+	.	.
scaffold1750	subtractBed	intrn	637338	637748	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637338	637748	254	+	.	.
scaffold1750	subtractBed	intrn	634464	635846	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	634464	635846	528	+	.	.
scaffold1750	subtractBed	intrn	635858	636439	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	635858	636439	359	+	.	.
scaffold1750	subtractBed	intrn	637254	637748	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637254	637748	219	+	.	.
scaffold1750	subtractBed	intrn	636442	636777	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	636442	636777	150	+	.	.
scaffold1750	subtractBed	intrn	637807	638106	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637807	638106	87	+	.	.
scaffold1750	subtractBed	intrn	637807	638235	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637807	638235	61	+	.	.
scaffold1750	subtractBed	intrn	633604	633843	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	633604	633843	27	+	.	.
scaffold1750	subtractBed	intrn	637314	637829	.	-	.	Parent=CGI_10021500;
	scaffold1750	WUBlastX	LTR_Pao	637314	637829	174	+	.	.
scaffold1750	subtractBed	intrn	641947	642063	.	-	.	Parent=CGI_10021500;
	scaffold1750	TRF	Tandem_Repeat	641947	642063	100	+	.	.
scaffold1750	subtractBed	intrn	681366	681491	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	681366	681491	43	+	.	.
scaffold1750	subtractBed	intrn	681127	681345	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	681127	681345	59	+	.	.
scaffold1750	subtractBed	intrn	681387	681512	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	681387	681512	61	+	.	.
scaffold1750	subtractBed	intrn	681648	681761	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	681648	681761	54	+	.	.
scaffold1750	subtractBed	intrn	680097	680465	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	680097	680465	160	+	.	.
scaffold1750	subtractBed	intrn	681127	681240	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	681127	681240	116	+	.	.
scaffold1750	subtractBed	intrn	682032	682157	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	682032	682157	83	+	.	.
scaffold1750	subtractBed	intrn	680067	680525	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	680067	680525	101	+	.	.
scaffold1750	subtractBed	intrn	686277	686299	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	686277	686450	48	-	.	.
scaffold1750	subtractBed	intrn	686447	686450	.	-	.	Parent=CGI_10021501;
	scaffold1750	WUBlastX	DNA_Harbinger	686277	686450	48	-	.	.
scaffold1750	subtractBed	intrn	689959	690118	.	-	.	Parent=CGI_10021502;
	scaffold1750	TRF	Tandem_Repeat	689959	690118	135	+	.	.
scaffold1750	subtractBed	intrn	688524	689337	.	-	.	Parent=CGI_10021502;
	scaffold1750	WUBlastX	LTR_Gypsy	688234	689337	406	-	.	.
scaffold1750	subtractBed	intrn	688524	689343	.	-	.	Parent=CGI_10021502;
	scaffold1750	WUBlastX	LTR_Gypsy-Troyk	688423	689343	547	-	.	.
scaffold1750	subtractBed	intrn	688524	688629	.	-	.	Parent=CGI_10021502;
	scaffold1750	WUBlastX	LTR_Gypsy-Troyk	688084	688629	297	-	.	.
scaffold1751	subtractBed	intrn	11501	11800	.	-	.	Parent=CGI_10010082;
	scaffold1751	WUBlastX	DNA_hAT-Blackja	11501	11800	83	-	.	.
scaffold1751	subtractBed	intrn	15214	15248	.	-	.	Parent=CGI_10010082;
	scaffold1751	TRF	Tandem_Repeat	15214	15248	70	+	.	.
scaffold1751	subtractBed	intrn	15727	15996	.	-	.	Parent=CGI_10010082;
	scaffold1751	WUBlastX	LINE_RTE-X	15727	15996	40	+	.	.
scaffold1751	subtractBed	intrn	15712	16134	.	-	.	Parent=CGI_10010082;
	scaffold1751	WUBlastX	LINE_RTE-X	15712	16134	24	+	.	.
scaffold1751	subtractBed	intrn	15673	15969	.	-	.	Parent=CGI_10010082;
	scaffold1751	WUBlastX	LINE_RTE-X	15673	15969	27	+	.	.
scaffold1751	subtractBed	intrn	156250	156287	.	+	.	Parent=CGI_10010088;
	scaffold1751	TRF	Tandem_Repeat	156250	156287	76	+	.	.
scaffold1751	subtractBed	intrn	158896	158926	.	-	.	Parent=CGI_10010089;
	scaffold1751	TRF	Tandem_Repeat	158896	158926	62	+	.	.
scaffold1751	subtractBed	intrn	173331	173479	.	-	.	Parent=CGI_10010089;
	scaffold1751	TRF	Tandem_Repeat	173331	173479	67	+	.	.
scaffold1751	subtractBed	intrn	197231	197258	.	-	.	Parent=CGI_10010090;
	scaffold1751	TRF	Tandem_Repeat	197231	197258	56	+	.	.
scaffold1751	subtractBed	intrn	211518	211643	.	+	.	Parent=CGI_10010091;
	scaffold1751	TRF	Tandem_Repeat	211518	211643	166	+	.	.
scaffold1751	subtractBed	intrn	245446	245490	.	-	.	Parent=CGI_10010093;
	scaffold1751	TRF	Tandem_Repeat	245446	245490	90	+	.	.
scaffold1751	subtractBed	intrn	249209	249248	.	-	.	Parent=CGI_10010093;
	scaffold1751	TRF	Tandem_Repeat	249209	249248	71	+	.	.
scaffold1753	subtractBed	intrn	7359	7428	.	+	.	Parent=CGI_10010799;
	scaffold1753	TRF	Tandem_Repeat	7359	7428	88	+	.	.
scaffold1753	subtractBed	intrn	7623	8456	.	+	.	Parent=CGI_10010799;
	scaffold1753	TRF	Tandem_Repeat	7623	8456	1271	+	.	.
scaffold1753	subtractBed	intrn	44291	44905	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	DNA_Helitron	44291	44905	131	+	.	.
scaffold1753	subtractBed	intrn	43160	44362	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	RC_Helitron	43160	44362	20	+	.	.
scaffold1753	subtractBed	intrn	43757	43867	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	RC_Helitron	43757	43867	24	+	.	.
scaffold1753	subtractBed	intrn	43904	44905	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	RC_Helitron	43904	44905	70	+	.	.
scaffold1753	subtractBed	intrn	42602	43102	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	RC_Helitron	42602	43102	22	+	.	.
scaffold1753	subtractBed	intrn	43799	44341	.	+	.	Parent=CGI_10010802;
	scaffold1753	WUBlastX	RC_Helitron	43799	44341	66	+	.	.
scaffold1753	subtractBed	intrn	108411	108444	.	+	.	Parent=CGI_10010805;
	scaffold1753	TRF	Tandem_Repeat	108411	108444	50	+	.	.
scaffold1753	subtractBed	intrn	108442	108490	.	+	.	Parent=CGI_10010805;
	scaffold1753	TRF	Tandem_Repeat	108442	108490	62	+	.	.
scaffold1753	subtractBed	intrn	148310	148428	.	+	.	Parent=CGI_10010806;
	scaffold1753	TRF	Tandem_Repeat	148310	148428	125	+	.	.
scaffold1753	subtractBed	intrn	172185	172256	.	-	.	Parent=CGI_10010807;
	scaffold1753	TRF	Tandem_Repeat	172185	172256	130	+	.	.
scaffold1753	subtractBed	intrn	173522	173719	.	-	.	Parent=CGI_10010807;
	scaffold1753	TRF	Tandem_Repeat	173522	173719	157	+	.	.
scaffold1753	subtractBed	intrn	183102	183155	.	-	.	Parent=CGI_10010807;
	scaffold1753	TRF	Tandem_Repeat	183102	183155	83	+	.	.
scaffold1753	subtractBed	intrn	185161	186447	.	-	.	Parent=CGI_10010807;
	scaffold1753	TRF	Tandem_Repeat	185161	186447	1854	+	.	.
scaffold1753	subtractBed	intrn	186455	186517	.	-	.	Parent=CGI_10010807;
	scaffold1753	TRF	Tandem_Repeat	186455	186517	74	+	.	.
scaffold1753	subtractBed	intrn	233994	235386	.	+	.	Parent=CGI_10010810;
	scaffold1753	TRF	Tandem_Repeat	233994	235386	1635	+	.	.
scaffold1753	subtractBed	intrn	233994	235423	.	+	.	Parent=CGI_10010810;
	scaffold1753	TRF	Tandem_Repeat	233994	235423	1832	+	.	.
scaffold1753	subtractBed	intrn	240375	240411	.	+	.	Parent=CGI_10010810;
	scaffold1753	TRF	Tandem_Repeat	240375	240411	74	+	.	.
scaffold1753	subtractBed	intrn	241276	241321	.	+	.	Parent=CGI_10010810;
	scaffold1753	TRF	Tandem_Repeat	241276	241321	74	+	.	.
scaffold1753	subtractBed	intrn	269566	269592	.	-	.	Parent=CGI_10010811;
	scaffold1753	TRF	Tandem_Repeat	269566	269592	54	+	.	.
scaffold1753	subtractBed	intrn	265571	266425	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	265571	266425	41	-	.	.
scaffold1753	subtractBed	intrn	266617	266784	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	266617	266784	51	-	.	.
scaffold1753	subtractBed	intrn	265192	265581	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	265192	265581	55	-	.	.
scaffold1753	subtractBed	intrn	266805	267875	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	266805	267875	40	-	.	.
scaffold1753	subtractBed	intrn	266270	266488	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	266270	266488	46	-	.	.
scaffold1753	subtractBed	intrn	266781	266906	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1	266781	266906	53	-	.	.
scaffold1753	subtractBed	intrn	266814	267389	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1	266814	267389	85	-	.	.
scaffold1753	subtractBed	intrn	266270	266428	.	-	.	Parent=CGI_10010811;
	scaffold1753	WUBlastX	LINE_L1-Tx1	266270	266428	50	-	.	.
scaffold1753	subtractBed	intrn	272689	272728	.	-	.	Parent=CGI_10010811;
	scaffold1753	TRF	Tandem_Repeat	272689	272728	80	+	.	.
scaffold1754	subtractBed	intrn	127114	127151	.	+	.	Parent=CGI_10009580;
	scaffold1754	TRF	Tandem_Repeat	127114	127151	76	+	.	.
scaffold1754	subtractBed	intrn	128240	128264	.	+	.	Parent=CGI_10009580;
	scaffold1754	TRF	Tandem_Repeat	128240	128264	50	+	.	.
scaffold1754	subtractBed	intrn	130430	130481	.	+	.	Parent=CGI_10009580;
	scaffold1754	TRF	Tandem_Repeat	130430	130481	104	+	.	.
scaffold1754	subtractBed	intrn	128611	129000	.	+	.	Parent=CGI_10009580;
	scaffold1754	WUBlastX	LINE_L1-Tx1	128611	129000	220	+	.	.
scaffold1754	subtractBed	intrn	128991	129488	.	+	.	Parent=CGI_10009580;
	scaffold1754	WUBlastX	LINE_L1-Tx1	128991	129488	99	+	.	.
scaffold1754	subtractBed	intrn	129491	130315	.	+	.	Parent=CGI_10009580;
	scaffold1754	WUBlastX	LINE_L1-Tx1	129491	130315	49	+	.	.
scaffold1754	subtractBed	intrn	128608	129066	.	+	.	Parent=CGI_10009580;
	scaffold1754	WUBlastX	LINE_L1	128608	129066	133	+	.	.
scaffold1754	subtractBed	intrn	128485	129000	.	+	.	Parent=CGI_10009580;
	scaffold1754	WUBlastX	LINE_L1	128485	129000	126	+	.	.
scaffold1754	subtractBed	intrn	185525	185581	.	-	.	Parent=CGI_10009582;
	scaffold1754	TRF	Tandem_Repeat	185525	185581	114	+	.	.
scaffold1754	subtractBed	intrn	185525	185581	.	+	.	Parent=CGI_10009583;
	scaffold1754	TRF	Tandem_Repeat	185525	185581	114	+	.	.
scaffold1754	subtractBed	intrn	193894	193960	.	+	.	Parent=CGI_10009583;
	scaffold1754	TRF	Tandem_Repeat	193894	193960	80	+	.	.
scaffold1754	subtractBed	intrn	216901	218222	.	+	.	Parent=CGI_10009584;
	scaffold1754	WUBlastX	LTR_Gypsy	215796	218222	1737	+	.	.
scaffold1754	subtractBed	intrn	218225	219802	.	+	.	Parent=CGI_10009584;
	scaffold1754	WUBlastX	LTR_Gypsy	218225	219802	1302	+	.	.
scaffold1754	subtractBed	intrn	218750	220096	.	+	.	Parent=CGI_10009584;
	scaffold1754	WUBlastX	LTR_Gypsy	218750	220096	138	+	.	.
scaffold1754	subtractBed	intrn	227611	227648	.	+	.	Parent=CGI_10009584;
	scaffold1754	TRF	Tandem_Repeat	227611	227648	76	+	.	.
scaffold1755	subtractBed	intrn	30963	31214	.	+	.	Parent=CGI_10002648;
	scaffold1755	WUBlastX	LINE_Penelope	30963	31214	32	-	.	.
scaffold1755	subtractBed	intrn	32274	32687	.	+	.	Parent=CGI_10002648;
	scaffold1755	WUBlastX	LINE_Penelope	32274	32687	124	-	.	.
scaffold1755	subtractBed	intrn	33114	33164	.	+	.	Parent=CGI_10002648;
	scaffold1755	TRF	Tandem_Repeat	33114	33164	52	+	.	.
scaffold1755	subtractBed	intrn	33114	33166	.	+	.	Parent=CGI_10002648;
	scaffold1755	TRF	Tandem_Repeat	33114	33166	74	+	.	.
scaffold1756	subtractBed	intrn	4989	5016	.	+	.	Parent=CGI_10002807;
	scaffold1756	TRF	Tandem_Repeat	4989	5016	56	+	.	.
scaffold1757	subtractBed	intrn	14608	14933	.	-	.	Parent=CGI_10005111;
	scaffold1757	TRF	Tandem_Repeat	14608	14948	610	+	.	.
scaffold1757	subtractBed	intrn	42988	43358	.	-	.	Parent=CGI_10005112;
	scaffold1757	WUBlastX	DNA_Academ	42988	43506	292	-	.	.
scaffold1757	subtractBed	intrn	77281	77310	.	-	.	Parent=CGI_10005114;
	scaffold1757	TRF	Tandem_Repeat	77281	77310	51	+	.	.
scaffold1757	subtractBed	intrn	77312	77376	.	-	.	Parent=CGI_10005114;
	scaffold1757	TRF	Tandem_Repeat	77312	77376	85	+	.	.
scaffold1758	subtractBed	intrn	13264	13316	.	+	.	Parent=CGI_10007060;
	scaffold1758	TRF	Tandem_Repeat	13264	13316	106	+	.	.
scaffold1758	subtractBed	intrn	18497	18802	.	+	.	Parent=CGI_10007060;
	scaffold1758	TRF	Tandem_Repeat	18497	18802	167	+	.	.
scaffold1758	subtractBed	intrn	19362	19432	.	+	.	Parent=CGI_10007060;
	scaffold1758	TRF	Tandem_Repeat	19362	19432	70	+	.	.
scaffold1758	subtractBed	intrn	70617	70652	.	+	.	Parent=CGI_10007061;
	scaffold1758	TRF	Tandem_Repeat	70617	70652	72	+	.	.
scaffold1758	subtractBed	intrn	70654	70706	.	+	.	Parent=CGI_10007061;
	scaffold1758	TRF	Tandem_Repeat	70654	70706	61	+	.	.
scaffold1758	subtractBed	intrn	70617	70678	.	+	.	Parent=CGI_10007061;
	scaffold1758	TRF	Tandem_Repeat	70617	70678	56	+	.	.
scaffold1758	subtractBed	intrn	113004	113053	.	-	.	Parent=CGI_10007062;
	scaffold1758	TRF	Tandem_Repeat	113004	113053	55	+	.	.
scaffold1759	subtractBed	intrn	86053	86176	.	+	.	Parent=CGI_10010906;
	scaffold1759	TRF	Tandem_Repeat	86053	86176	78	+	.	.
scaffold1759	subtractBed	intrn	88854	88892	.	+	.	Parent=CGI_10010906;
	scaffold1759	TRF	Tandem_Repeat	88854	88892	78	+	.	.
scaffold1759	subtractBed	intrn	98562	98631	.	+	.	Parent=CGI_10010906;
	scaffold1759	TRF	Tandem_Repeat	98562	98631	79	+	.	.
scaffold1759	subtractBed	intrn	100334	101228	.	+	.	Parent=CGI_10010906;
	scaffold1759	TRF	Tandem_Repeat	100334	101228	1091	+	.	.
scaffold1759	subtractBed	intrn	102041	102094	.	+	.	Parent=CGI_10010906;
	scaffold1759	WUBlastX	LTR_Gypsy	102041	102268	26	+	.	.
scaffold1759	subtractBed	intrn	102257	102268	.	+	.	Parent=CGI_10010906;
	scaffold1759	WUBlastX	LTR_Gypsy	102041	102268	26	+	.	.
scaffold1759	subtractBed	intrn	102996	103109	.	+	.	Parent=CGI_10010906;
	scaffold1759	WUBlastX	LTR_Gypsy	102996	103109	31	+	.	.
scaffold1759	subtractBed	intrn	114302	114411	.	+	.	Parent=CGI_10010907;
	scaffold1759	TRF	Tandem_Repeat	114302	114411	62	+	.	.
scaffold1759	subtractBed	intrn	117235	117349	.	+	.	Parent=CGI_10010907;
	scaffold1759	TRF	Tandem_Repeat	117235	117349	72	+	.	.
scaffold1759	subtractBed	intrn	117451	117506	.	+	.	Parent=CGI_10010907;
	scaffold1759	TRF	Tandem_Repeat	117451	117506	112	+	.	.
scaffold1760	subtractBed	intrn	14675	15869	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	14675	15869	1096	+	.	.
scaffold1760	subtractBed	intrn	14675	15869	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	14675	15869	1489	+	.	.
scaffold1760	subtractBed	intrn	14675	15869	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	14675	15869	1580	+	.	.
scaffold1760	subtractBed	intrn	20146	20966	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	20146	20966	947	+	.	.
scaffold1760	subtractBed	intrn	20146	20966	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	20146	20966	1104	+	.	.
scaffold1760	subtractBed	intrn	25393	25434	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	25393	25434	84	+	.	.
scaffold1760	subtractBed	intrn	32117	32169	.	+	.	Parent=CGI_10002757;
	scaffold1760	TRF	Tandem_Repeat	32117	32169	106	+	.	.
scaffold1760	subtractBed	intrn	35617	35811	.	+	.	Parent=CGI_10002757;
	scaffold1760	WUBlastX	LINE_L1-Tx1	35617	35811	81	+	.	.
scaffold1760	subtractBed	intrn	35437	35811	.	+	.	Parent=CGI_10002757;
	scaffold1760	WUBlastX	LINE_L1-Tx1	35437	35811	72	+	.	.
scaffold1763	subtractBed	intrn	12539	12626	.	-	.	Parent=CGI_10019524;
	scaffold1763	TRF	Tandem_Repeat	12539	12626	86	+	.	.
scaffold1763	subtractBed	intrn	39689	39752	.	+	.	Parent=CGI_10019526;
	scaffold1763	TRF	Tandem_Repeat	39689	39752	67	+	.	.
scaffold1763	subtractBed	intrn	54969	55078	.	+	.	Parent=CGI_10019526;
	scaffold1763	TRF	Tandem_Repeat	54969	55078	97	+	.	.
scaffold1763	subtractBed	intrn	57044	57078	.	+	.	Parent=CGI_10019526;
	scaffold1763	TRF	Tandem_Repeat	57044	57078	61	+	.	.
scaffold1763	subtractBed	intrn	66090	66258	.	+	.	Parent=CGI_10019526;
	scaffold1763	TRF	Tandem_Repeat	66090	66258	74	+	.	.
scaffold1763	subtractBed	intrn	68072	68097	.	+	.	Parent=CGI_10019526;
	scaffold1763	TRF	Tandem_Repeat	68072	68097	52	+	.	.
scaffold1763	subtractBed	intrn	95218	95261	.	+	.	Parent=CGI_10019527;
	scaffold1763	TRF	Tandem_Repeat	95218	95261	79	+	.	.
scaffold1763	subtractBed	intrn	97369	97415	.	+	.	Parent=CGI_10019527;
	scaffold1763	TRF	Tandem_Repeat	97369	97415	94	+	.	.
scaffold1763	subtractBed	intrn	100314	100341	.	+	.	Parent=CGI_10019527;
	scaffold1763	TRF	Tandem_Repeat	100314	100341	56	+	.	.
scaffold1763	subtractBed	intrn	165661	165706	.	+	.	Parent=CGI_10019530;
	scaffold1763	TRF	Tandem_Repeat	165661	165706	74	+	.	.
scaffold1763	subtractBed	intrn	173756	173824	.	+	.	Parent=CGI_10019530;
	scaffold1763	TRF	Tandem_Repeat	173756	173824	138	+	.	.
scaffold1763	subtractBed	intrn	379099	379131	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	379099	379131	66	+	.	.
scaffold1763	subtractBed	intrn	381084	381375	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	381084	381412	496	+	.	.
scaffold1763	subtractBed	intrn	386008	386174	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	386008	386174	113	+	.	.
scaffold1763	subtractBed	intrn	386156	386649	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	386156	386649	641	+	.	.
scaffold1763	subtractBed	intrn	386697	386818	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	386697	386818	77	+	.	.
scaffold1763	subtractBed	intrn	390715	390759	.	-	.	Parent=CGI_10019543;
	scaffold1763	TRF	Tandem_Repeat	390715	390759	90	+	.	.
scaffold1763	subtractBed	intrn	421812	421837	.	+	.	Parent=CGI_10019544;
	scaffold1763	TRF	Tandem_Repeat	421812	421837	52	+	.	.
scaffold1763	subtractBed	intrn	455885	455920	.	+	.	Parent=CGI_10019548;
	scaffold1763	TRF	Tandem_Repeat	455885	455920	72	+	.	.
scaffold1763	subtractBed	intrn	457574	457630	.	+	.	Parent=CGI_10019548;
	scaffold1763	TRF	Tandem_Repeat	457574	457630	105	+	.	.
scaffold1763	subtractBed	intrn	461089	461133	.	+	.	Parent=CGI_10019548;
	scaffold1763	TRF	Tandem_Repeat	461089	461133	90	+	.	.
scaffold1763	subtractBed	intrn	484776	484984	.	+	.	Parent=CGI_10019551;
	scaffold1763	TRF	Tandem_Repeat	484776	484984	183	+	.	.
scaffold1763	subtractBed	intrn	485658	486125	.	+	.	Parent=CGI_10019551;
	scaffold1763	TRF	Tandem_Repeat	485658	486125	586	+	.	.
scaffold1763	subtractBed	intrn	569572	569607	.	+	.	Parent=CGI_10019559;
	scaffold1763	TRF	Tandem_Repeat	569572	569607	63	+	.	.
scaffold1763	subtractBed	intrn	569611	569730	.	+	.	Parent=CGI_10019559;
	scaffold1763	TRF	Tandem_Repeat	569611	569730	195	+	.	.
scaffold1766	subtractBed	intrn	9533	9582	.	-	.	Parent=CGI_10006270;
	scaffold1766	TRF	Tandem_Repeat	9533	9582	82	+	.	.
scaffold1766	subtractBed	intrn	11633	11797	.	-	.	Parent=CGI_10006270;
	scaffold1766	WUBlastX	LTR_DIRS	11633	11797	78	+	.	.
scaffold1766	subtractBed	intrn	11788	11886	.	-	.	Parent=CGI_10006270;
	scaffold1766	WUBlastX	LTR_DIRS	11788	11886	30	+	.	.
scaffold1766	subtractBed	intrn	73818	73937	.	-	.	Parent=CGI_10006273;
	scaffold1766	TRF	Tandem_Repeat	73818	73937	222	+	.	.
scaffold1766	subtractBed	intrn	73991	74482	.	-	.	Parent=CGI_10006273;
	scaffold1766	TRF	Tandem_Repeat	73991	74482	824	+	.	.
scaffold1766	subtractBed	intrn	77780	77828	.	-	.	Parent=CGI_10006273;
	scaffold1766	TRF	Tandem_Repeat	77780	77828	91	+	.	.
scaffold1766	subtractBed	intrn	89094	89153	.	+	.	Parent=CGI_10006274;
	scaffold1766	TRF	Tandem_Repeat	89094	89153	111	+	.	.
scaffold1766	subtractBed	intrn	111761	111821	.	+	.	Parent=CGI_10006276;
	scaffold1766	TRF	Tandem_Repeat	111761	111821	122	+	.	.
scaffold1766	subtractBed	intrn	115809	115905	.	+	.	Parent=CGI_10006276;
	scaffold1766	TRF	Tandem_Repeat	115809	115905	107	+	.	.
scaffold1766	subtractBed	intrn	126024	126111	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	126024	126111	54	+	.	.
scaffold1766	subtractBed	intrn	126871	127626	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	126871	127626	856	+	.	.
scaffold1766	subtractBed	intrn	126962	127701	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	126962	127701	659	+	.	.
scaffold1766	subtractBed	intrn	129062	130152	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	129062	130176	552	+	.	.
scaffold1766	subtractBed	intrn	130300	130338	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	130282	130338	96	+	.	.
scaffold1766	subtractBed	intrn	134296	134337	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	134296	134337	84	+	.	.
scaffold1766	subtractBed	intrn	138415	139010	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	138415	139010	1111	+	.	.
scaffold1766	subtractBed	intrn	139956	140061	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	139956	140061	176	+	.	.
scaffold1766	subtractBed	intrn	140518	140569	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	140518	140569	104	+	.	.
scaffold1766	subtractBed	intrn	142394	142787	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	142394	142787	563	+	.	.
scaffold1766	subtractBed	intrn	143280	143364	.	-	.	Parent=CGI_10006278;
	scaffold1766	TRF	Tandem_Repeat	143280	143364	86	+	.	.
scaffold1767	subtractBed	intrn	23332	23373	.	+	.	Parent=CGI_10016903;
	scaffold1767	TRF	Tandem_Repeat	23332	23373	84	+	.	.
scaffold1767	subtractBed	intrn	24240	24308	.	+	.	Parent=CGI_10016903;
	scaffold1767	TRF	Tandem_Repeat	24240	24308	138	+	.	.
scaffold1767	subtractBed	intrn	93699	95615	.	+	.	Parent=CGI_10016907;
	scaffold1767	WUBlastX	LINE_L1-Tx1	93699	95615	458	+	.	.
scaffold1767	subtractBed	intrn	93161	93199	.	+	.	Parent=CGI_10016907;
	scaffold1767	WUBlastX	LINE_RTE-BovB	93098	93199	23	+	.	.
scaffold1767	subtractBed	intrn	105316	105352	.	+	.	Parent=CGI_10016908;
	scaffold1767	TRF	Tandem_Repeat	105316	105352	74	+	.	.
scaffold1767	subtractBed	intrn	106701	106736	.	+	.	Parent=CGI_10016908;
	scaffold1767	TRF	Tandem_Repeat	106701	106736	72	+	.	.
scaffold1767	subtractBed	intrn	134501	134574	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	134501	134574	141	+	.	.
scaffold1767	subtractBed	intrn	136997	138080	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	136997	138080	1394	+	.	.
scaffold1767	subtractBed	intrn	139847	139912	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	139847	139912	80	+	.	.
scaffold1767	subtractBed	intrn	141745	141774	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	141745	141774	60	+	.	.
scaffold1767	subtractBed	intrn	145628	145687	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	145628	145687	75	+	.	.
scaffold1767	subtractBed	intrn	145628	145687	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	145628	145687	84	+	.	.
scaffold1767	subtractBed	intrn	155275	155317	.	-	.	Parent=CGI_10016909;
	scaffold1767	TRF	Tandem_Repeat	155275	155317	77	+	.	.
scaffold1767	subtractBed	intrn	174165	174166	.	-	.	Parent=CGI_10016910;
	scaffold1767	WUBlastX	LTR_Copia	174026	174166	32	-	.	.
scaffold1767	subtractBed	intrn	272772	272804	.	-	.	Parent=CGI_10016919;
	scaffold1767	TRF	Tandem_Repeat	272772	272804	57	+	.	.
scaffold1767	subtractBed	intrn	289387	289435	.	+	.	Parent=CGI_10016920;
	scaffold1767	TRF	Tandem_Repeat	289387	289435	89	+	.	.
scaffold1767	subtractBed	intrn	308992	309049	.	-	.	Parent=CGI_10016921;
	scaffold1767	TRF	Tandem_Repeat	308992	309049	109	+	.	.
scaffold1767	subtractBed	intrn	313543	313604	.	-	.	Parent=CGI_10016921;
	scaffold1767	TRF	Tandem_Repeat	313543	313604	81	+	.	.
scaffold1767	subtractBed	intrn	315732	315768	.	-	.	Parent=CGI_10016921;
	scaffold1767	TRF	Tandem_Repeat	315732	315768	74	+	.	.
scaffold1767	subtractBed	intrn	328684	328749	.	-	.	Parent=CGI_10016922;
	scaffold1767	TRF	Tandem_Repeat	328684	328749	105	+	.	.
scaffold1767	subtractBed	intrn	375745	377310	.	-	.	Parent=CGI_10016926;
	scaffold1767	WUBlastX	DNA_hAT	375745	377310	427	-	.	.
scaffold1767	subtractBed	intrn	406168	406236	.	+	.	Parent=CGI_10016928;
	scaffold1767	TRF	Tandem_Repeat	406168	406236	111	+	.	.
scaffold1767	subtractBed	intrn	410018	410322	.	+	.	Parent=CGI_10016928;
	scaffold1767	TRF	Tandem_Repeat	410018	410322	110	+	.	.
scaffold1767	subtractBed	intrn	410152	410322	.	+	.	Parent=CGI_10016928;
	scaffold1767	TRF	Tandem_Repeat	410152	410322	145	+	.	.
scaffold1767	subtractBed	intrn	410243	410304	.	+	.	Parent=CGI_10016928;
	scaffold1767	TRF	Tandem_Repeat	410243	410304	51	+	.	.
scaffold1767	subtractBed	intrn	445121	446081	.	+	.	Parent=CGI_10016931;
	scaffold1767	TRF	Tandem_Repeat	445121	446081	1396	+	.	.
scaffold1767	subtractBed	intrn	456307	456351	.	+	.	Parent=CGI_10016931;
	scaffold1767	TRF	Tandem_Repeat	456307	456351	90	+	.	.
scaffold1767	subtractBed	intrn	468879	469832	.	+	.	Parent=CGI_10016931;
	scaffold1767	TRF	Tandem_Repeat	468879	469832	1234	+	.	.
scaffold1769	subtractBed	intrn	32877	32943	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	32877	32943	134	+	.	.
scaffold1769	subtractBed	intrn	33253	33304	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	33253	33304	95	+	.	.
scaffold1769	subtractBed	intrn	35797	35836	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	35797	35836	80	+	.	.
scaffold1769	subtractBed	intrn	40578	40620	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	40578	40620	86	+	.	.
scaffold1769	subtractBed	intrn	45382	45409	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	45382	45409	56	+	.	.
scaffold1769	subtractBed	intrn	51847	51924	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	51847	51924	77	+	.	.
scaffold1769	subtractBed	intrn	51848	51906	.	+	.	Parent=CGI_10009233;
	scaffold1769	TRF	Tandem_Repeat	51848	51906	57	+	.	.
scaffold1769	subtractBed	intrn	64380	64430	.	-	.	Parent=CGI_10009234;
	scaffold1769	TRF	Tandem_Repeat	64380	64430	84	+	.	.
scaffold1769	subtractBed	intrn	64784	65324	.	-	.	Parent=CGI_10009234;
	scaffold1769	TRF	Tandem_Repeat	64784	65358	745	+	.	.
scaffold1769	subtractBed	intrn	73512	73900	.	-	.	Parent=CGI_10009235;
	scaffold1769	TRF	Tandem_Repeat	73512	73903	475	+	.	.
scaffold1769	subtractBed	intrn	110117	110206	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	110117	110206	58	+	.	.
scaffold1769	subtractBed	intrn	112094	112413	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	112094	112413	119	+	.	.
scaffold1769	subtractBed	intrn	112092	112413	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	112092	112413	422	+	.	.
scaffold1769	subtractBed	intrn	113104	113143	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	113104	113143	57	+	.	.
scaffold1769	subtractBed	intrn	117923	118711	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	117923	118711	1149	+	.	.
scaffold1769	subtractBed	intrn	123016	123107	.	+	.	Parent=CGI_10009239;
	scaffold1769	TRF	Tandem_Repeat	123016	123107	53	+	.	.
scaffold1769	subtractBed	intrn	138540	138545	.	-	.	Parent=CGI_10009241;
	scaffold1769	WUBlastX	DNA_IS4EU	138540	138935	69	-	.	.
scaffold1769	subtractBed	intrn	145167	145295	.	-	.	Parent=CGI_10009242;
	scaffold1769	WUBlastX	LINE_L2	145125	145295	26	-	.	.
scaffold1769	subtractBed	intrn	151150	152061	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	151150	152061	930	+	.	.
scaffold1769	subtractBed	intrn	155092	155124	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	155092	155124	66	+	.	.
scaffold1769	subtractBed	intrn	163504	163550	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	163504	163550	94	+	.	.
scaffold1769	subtractBed	intrn	170172	170200	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	170172	170200	58	+	.	.
scaffold1769	subtractBed	intrn	183856	183929	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	183856	183929	130	+	.	.
scaffold1769	subtractBed	intrn	184015	184054	.	-	.	Parent=CGI_10009242;
	scaffold1769	TRF	Tandem_Repeat	184015	184054	80	+	.	.
scaffold1769	subtractBed	intrn	195061	195119	.	+	.	Parent=CGI_10009243;
	scaffold1769	TRF	Tandem_Repeat	195061	195119	118	+	.	.
scaffold1769	subtractBed	intrn	196580	196598	.	+	.	Parent=CGI_10009243;
	scaffold1769	WUBlastX	DNA_Crypton	196580	196780	97	+	.	.
scaffold1769	subtractBed	intrn	196775	196780	.	+	.	Parent=CGI_10009243;
	scaffold1769	WUBlastX	DNA_Crypton	196580	196780	97	+	.	.
scaffold1769	subtractBed	intrn	202461	202697	.	+	.	Parent=CGI_10009243;
	scaffold1769	TRF	Tandem_Repeat	202461	202697	203	+	.	.
scaffold1769	subtractBed	intrn	204248	204392	.	+	.	Parent=CGI_10009243;
	scaffold1769	TRF	Tandem_Repeat	204248	204392	263	+	.	.
scaffold1769	subtractBed	intrn	207188	207312	.	+	.	Parent=CGI_10009243;
	scaffold1769	TRF	Tandem_Repeat	207188	207312	241	+	.	.
scaffold177	subtractBed	intrn	260000	260024	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	260000	260024	50	+	.	.
scaffold177	subtractBed	intrn	268719	268781	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	268719	268781	126	+	.	.
scaffold177	subtractBed	intrn	276417	276650	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	276417	276650	283	+	.	.
scaffold177	subtractBed	intrn	285593	285625	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	285593	285625	52	+	.	.
scaffold177	subtractBed	intrn	283562	283834	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	283562	283834	45	-	.	.
scaffold177	subtractBed	intrn	283628	283807	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	283628	283807	72	-	.	.
scaffold177	subtractBed	intrn	284880	285107	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	284880	285107	60	-	.	.
scaffold177	subtractBed	intrn	285109	285282	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	285109	285282	42	-	.	.
scaffold177	subtractBed	intrn	284736	285125	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	284736	285125	50	-	.	.
scaffold177	subtractBed	intrn	284677	284724	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	284677	284724	32	-	.	.
scaffold177	subtractBed	intrn	284880	284993	.	-	.	Parent=CGI_10016064;
	scaffold177	WUBlastX	DNA_Harbinger	284880	284993	73	-	.	.
scaffold177	subtractBed	intrn	293618	293671	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	293618	293671	56	+	.	.
scaffold177	subtractBed	intrn	293621	293670	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	293621	293670	50	+	.	.
scaffold177	subtractBed	intrn	298129	298166	.	-	.	Parent=CGI_10016064;
	scaffold177	TRF	Tandem_Repeat	298129	298166	51	+	.	.
scaffold177	subtractBed	intrn	307581	307643	.	-	.	Parent=CGI_10016066;
	scaffold177	TRF	Tandem_Repeat	307581	307643	126	+	.	.
scaffold177	subtractBed	intrn	317127	317927	.	-	.	Parent=CGI_10016066;
	scaffold177	WUBlastX	LINE_L2	317127	317927	52	+	.	.
scaffold177	subtractBed	intrn	317031	317732	.	-	.	Parent=CGI_10016066;
	scaffold177	WUBlastX	LINE_L1	317031	317732	80	+	.	.
scaffold177	subtractBed	intrn	407213	407278	.	+	.	Parent=CGI_10016069;
	scaffold177	TRF	Tandem_Repeat	407213	407278	132	+	.	.
scaffold177	subtractBed	intrn	417388	417412	.	-	.	Parent=CGI_10016070;
	scaffold177	TRF	Tandem_Repeat	417388	417412	50	+	.	.
scaffold177	subtractBed	intrn	421207	421275	.	+	.	Parent=CGI_10016071;
	scaffold177	TRF	Tandem_Repeat	421207	421275	79	+	.	.
scaffold177	subtractBed	intrn	422093	422406	.	+	.	Parent=CGI_10016071;
	scaffold177	TRF	Tandem_Repeat	422063	422406	210	+	.	.
scaffold1770	subtractBed	intrn	33361	33397	.	+	.	Parent=CGI_10005018;
	scaffold1770	TRF	Tandem_Repeat	33361	33397	74	+	.	.
scaffold1770	subtractBed	intrn	76497	76538	.	-	.	Parent=CGI_10005021;
	scaffold1770	TRF	Tandem_Repeat	76497	76538	84	+	.	.
scaffold1770	subtractBed	intrn	76574	76623	.	-	.	Parent=CGI_10005021;
	scaffold1770	TRF	Tandem_Repeat	76574	76623	100	+	.	.
scaffold1770	subtractBed	intrn	87784	87900	.	-	.	Parent=CGI_10005023;
	scaffold1770	TRF	Tandem_Repeat	87784	87900	126	+	.	.
scaffold1770	subtractBed	intrn	87784	87900	.	+	.	Parent=CGI_10005024;
	scaffold1770	TRF	Tandem_Repeat	87784	87900	126	+	.	.
scaffold1770	subtractBed	intrn	91767	91844	.	+	.	Parent=CGI_10005024;
	scaffold1770	TRF	Tandem_Repeat	91767	91844	147	+	.	.
scaffold1771	subtractBed	intrn	1823	1863	.	+	.	Parent=CGI_10004381;
	scaffold1771	TRF	Tandem_Repeat	1823	1863	82	+	.	.
scaffold1771	subtractBed	intrn	25104	25311	.	-	.	Parent=CGI_10004384;
	scaffold1771	TRF	Tandem_Repeat	25104	25311	199	+	.	.
scaffold1771	subtractBed	intrn	29987	30577	.	-	.	Parent=CGI_10004384;
	scaffold1771	TRF	Tandem_Repeat	29987	30577	993	+	.	.
scaffold1771	subtractBed	intrn	32078	32262	.	-	.	Parent=CGI_10004384;
	scaffold1771	TRF	Tandem_Repeat	32078	32262	144	+	.	.
scaffold1771	subtractBed	intrn	43160	43573	.	-	.	Parent=CGI_10004384;
	scaffold1771	WUBlastX	DNA_TcMar-Tc2	43160	43573	96	+	.	.
scaffold1771	subtractBed	intrn	49270	49580	.	-	.	Parent=CGI_10004385;
	scaffold1771	TRF	Tandem_Repeat	49270	49580	541	+	.	.
scaffold1771	subtractBed	intrn	56970	57153	.	-	.	Parent=CGI_10004385;
	scaffold1771	TRF	Tandem_Repeat	56970	57153	268	+	.	.
scaffold1771	subtractBed	intrn	56964	57246	.	-	.	Parent=CGI_10004385;
	scaffold1771	TRF	Tandem_Repeat	56964	57246	106	+	.	.
scaffold1771	subtractBed	intrn	57479	57667	.	-	.	Parent=CGI_10004385;
	scaffold1771	TRF	Tandem_Repeat	57479	57667	360	+	.	.
scaffold1771	subtractBed	intrn	89006	89150	.	-	.	Parent=CGI_10004387;
	scaffold1771	TRF	Tandem_Repeat	89006	89150	121	+	.	.
scaffold1771	subtractBed	intrn	90200	91474	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy	90200	91474	505	-	.	.
scaffold1771	subtractBed	intrn	94132	94944	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy	94132	94944	139	-	.	.
scaffold1771	subtractBed	intrn	94348	95061	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy	94348	95061	72	-	.	.
scaffold1771	subtractBed	intrn	94273	95229	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy	94273	95229	48	-	.	.
scaffold1771	subtractBed	intrn	94102	94188	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy	94102	94188	22	-	.	.
scaffold1771	subtractBed	intrn	90425	94066	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy-Cigr	90425	94066	1830	-	.	.
scaffold1771	subtractBed	intrn	94387	94953	.	-	.	Parent=CGI_10004387;
	scaffold1771	WUBlastX	LTR_Gypsy-Cigr	94387	94953	151	-	.	.
scaffold1772	subtractBed	intrn	16220	16363	.	-	.	Parent=CGI_10014804;
	scaffold1772	WUBlastX	DNA_IS4EU	16220	16363	21	-	.	.
scaffold1772	subtractBed	intrn	16450	17163	.	-	.	Parent=CGI_10014804;
	scaffold1772	WUBlastX	DNA_IS4EU	16450	17163	81	-	.	.
scaffold1772	subtractBed	intrn	202107	202256	.	-	.	Parent=CGI_10014812;
	scaffold1772	WUBlastX	LTR_DIRS	202107	202256	59	-	.	.
scaffold1772	subtractBed	intrn	202486	202557	.	-	.	Parent=CGI_10014812;
	scaffold1772	WUBlastX	LTR_DIRS	202486	202557	35	-	.	.
scaffold1772	subtractBed	intrn	202134	202256	.	-	.	Parent=CGI_10014812;
	scaffold1772	WUBlastX	LTR_DIRS	202134	202256	69	-	.	.
scaffold1772	subtractBed	intrn	202625	203182	.	-	.	Parent=CGI_10014812;
	scaffold1772	WUBlastX	LTR_DIRS	202625	203182	61	-	.	.
scaffold1772	subtractBed	intrn	202265	202486	.	-	.	Parent=CGI_10014812;
	scaffold1772	WUBlastX	LTR_DIRS	202265	202486	28	-	.	.
scaffold1772	subtractBed	intrn	203959	204024	.	-	.	Parent=CGI_10014812;
	scaffold1772	TRF	Tandem_Repeat	203959	204024	114	+	.	.
scaffold1772	subtractBed	intrn	216844	216895	.	-	.	Parent=CGI_10014813;
	scaffold1772	TRF	Tandem_Repeat	216844	216895	86	+	.	.
scaffold1772	subtractBed	intrn	218370	218435	.	-	.	Parent=CGI_10014813;
	scaffold1772	TRF	Tandem_Repeat	218370	218435	71	+	.	.
scaffold1772	subtractBed	intrn	271325	272077	.	+	.	Parent=CGI_10014816;
	scaffold1772	TRF	Tandem_Repeat	271325	272077	983	+	.	.
scaffold1772	subtractBed	intrn	274462	274592	.	+	.	Parent=CGI_10014816;
	scaffold1772	TRF	Tandem_Repeat	274462	274592	154	+	.	.
scaffold1772	subtractBed	intrn	285707	286152	.	+	.	Parent=CGI_10014817;
	scaffold1772	TRF	Tandem_Repeat	285707	286152	685	+	.	.
scaffold1772	subtractBed	intrn	288529	288755	.	+	.	Parent=CGI_10014817;
	scaffold1772	TRF	Tandem_Repeat	288529	288755	337	+	.	.
scaffold1772	subtractBed	intrn	289274	289714	.	+	.	Parent=CGI_10014817;
	scaffold1772	TRF	Tandem_Repeat	289274	289714	491	+	.	.
scaffold1772	subtractBed	intrn	290459	291299	.	+	.	Parent=CGI_10014817;
	scaffold1772	TRF	Tandem_Repeat	290459	291299	1179	+	.	.
scaffold1772	subtractBed	intrn	291184	291254	.	+	.	Parent=CGI_10014817;
	scaffold1772	TRF	Tandem_Repeat	291184	291254	52	+	.	.
scaffold1772	subtractBed	intrn	375824	375850	.	-	.	Parent=CGI_10014820;
	scaffold1772	TRF	Tandem_Repeat	375824	375850	54	+	.	.
scaffold1772	subtractBed	intrn	376165	376200	.	-	.	Parent=CGI_10014820;
	scaffold1772	TRF	Tandem_Repeat	376165	376200	54	+	.	.
scaffold1772	subtractBed	intrn	378074	378098	.	-	.	Parent=CGI_10014820;
	scaffold1772	TRF	Tandem_Repeat	378074	378098	50	+	.	.
scaffold1773	subtractBed	intrn	83981	84685	.	-	.	Parent=CGI_10011225;
	scaffold1773	WUBlastX	LTR_Gypsy-Cigr	83981	84685	184	-	.	.
scaffold1773	subtractBed	intrn	83933	84175	.	-	.	Parent=CGI_10011225;
	scaffold1773	WUBlastX	LTR_Copia	83933	84175	67	-	.	.
scaffold1773	subtractBed	intrn	83890	84037	.	-	.	Parent=CGI_10011225;
	scaffold1773	WUBlastX	LTR_Gypsy	83864	84037	36	-	.	.
scaffold1773	subtractBed	intrn	115331	115633	.	+	.	Parent=CGI_10011228;
	scaffold1773	WUBlastX	LINE_Penelope	115331	115633	39	+	.	.
scaffold1773	subtractBed	intrn	115460	115624	.	+	.	Parent=CGI_10011228;
	scaffold1773	WUBlastX	LINE_Penelope	115460	115624	69	+	.	.
scaffold1773	subtractBed	intrn	115638	116210	.	+	.	Parent=CGI_10011228;
	scaffold1773	WUBlastX	LINE_Penelope	115638	116210	133	+	.	.
scaffold1774	subtractBed	intrn	47754	47813	.	+	.	Parent=CGI_10006376;
	scaffold1774	WUBlastX	DNA_Kolobok	47754	47813	25	+	.	.
scaffold1774	subtractBed	intrn	48204	49013	.	+	.	Parent=CGI_10006376;
	scaffold1774	WUBlastX	DNA_Kolobok	48204	49013	75	+	.	.
scaffold1774	subtractBed	intrn	48375	49025	.	+	.	Parent=CGI_10006376;
	scaffold1774	WUBlastX	DNA_Kolobok	48375	49025	120	+	.	.
scaffold1774	subtractBed	intrn	49027	49599	.	+	.	Parent=CGI_10006376;
	scaffold1774	WUBlastX	DNA_Kolobok	49027	49986	578	+	.	.
scaffold1774	subtractBed	intrn	75205	75258	.	-	.	Parent=CGI_10006381;
	scaffold1774	TRF	Tandem_Repeat	75205	75258	108	+	.	.
scaffold1774	subtractBed	intrn	75258	75309	.	-	.	Parent=CGI_10006381;
	scaffold1774	TRF	Tandem_Repeat	75258	75309	104	+	.	.
scaffold1774	subtractBed	intrn	80532	80936	.	+	.	Parent=CGI_10006382;
	scaffold1774	TRF	Tandem_Repeat	80532	80936	418	+	.	.
scaffold1774	subtractBed	intrn	88016	88146	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	88016	88146	151	+	.	.
scaffold1774	subtractBed	intrn	88387	88419	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	88387	88419	66	+	.	.
scaffold1774	subtractBed	intrn	88477	88510	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	88477	88510	50	+	.	.
scaffold1774	subtractBed	intrn	88512	88537	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	88512	88537	52	+	.	.
scaffold1774	subtractBed	intrn	89062	89110	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	89062	89110	89	+	.	.
scaffold1774	subtractBed	intrn	89335	89465	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	89335	89465	142	+	.	.
scaffold1774	subtractBed	intrn	89336	89465	.	+	.	Parent=CGI_10006383;
	scaffold1774	TRF	Tandem_Repeat	89336	89465	158	+	.	.
scaffold1774	subtractBed	intrn	95063	95133	.	-	.	Parent=CGI_10006384;
	scaffold1774	TRF	Tandem_Repeat	95063	95133	142	+	.	.
scaffold1774	subtractBed	intrn	96534	96580	.	-	.	Parent=CGI_10006384;
	scaffold1774	TRF	Tandem_Repeat	96534	96580	94	+	.	.
scaffold1774	subtractBed	intrn	96580	96612	.	-	.	Parent=CGI_10006384;
	scaffold1774	TRF	Tandem_Repeat	96580	96612	57	+	.	.
scaffold1774	subtractBed	intrn	95063	95133	.	+	.	Parent=CGI_10006385;
	scaffold1774	TRF	Tandem_Repeat	95063	95133	142	+	.	.
scaffold1774	subtractBed	intrn	96534	96580	.	+	.	Parent=CGI_10006385;
	scaffold1774	TRF	Tandem_Repeat	96534	96580	94	+	.	.
scaffold1774	subtractBed	intrn	96580	96612	.	+	.	Parent=CGI_10006385;
	scaffold1774	TRF	Tandem_Repeat	96580	96612	57	+	.	.
scaffold1774	subtractBed	intrn	130990	131042	.	+	.	Parent=CGI_10006387;
	scaffold1774	TRF	Tandem_Repeat	130990	131042	54	+	.	.
scaffold1774	subtractBed	intrn	142476	142542	.	-	.	Parent=CGI_10006388;
	scaffold1774	TRF	Tandem_Repeat	142476	142542	89	+	.	.
scaffold1774	subtractBed	intrn	143037	143070	.	-	.	Parent=CGI_10006388;
	scaffold1774	TRF	Tandem_Repeat	143037	143070	68	+	.	.
scaffold1774	subtractBed	intrn	143271	143336	.	-	.	Parent=CGI_10006388;
	scaffold1774	TRF	Tandem_Repeat	143271	143336	123	+	.	.
scaffold1774	subtractBed	intrn	147971	148037	.	-	.	Parent=CGI_10006388;
	scaffold1774	TRF	Tandem_Repeat	147971	148037	80	+	.	.
scaffold1777	subtractBed	intrn	8288	8327	.	+	.	Parent=CGI_10003152;
	scaffold1777	TRF	Tandem_Repeat	8288	8327	80	+	.	.
scaffold1777	subtractBed	intrn	8712	8855	.	+	.	Parent=CGI_10003152;
	scaffold1777	WUBlastX	LTR_Ngaro	8712	8855	26	+	.	.
scaffold1777	subtractBed	intrn	8858	8926	.	+	.	Parent=CGI_10003152;
	scaffold1777	WUBlastX	LTR_Ngaro	8858	8926	24	+	.	.
scaffold1777	subtractBed	intrn	8333	8647	.	+	.	Parent=CGI_10003152;
	scaffold1777	WUBlastX	LTR_Ngaro	8333	8647	63	+	.	.
scaffold1777	subtractBed	intrn	8763	8855	.	+	.	Parent=CGI_10003152;
	scaffold1777	WUBlastX	LTR_Ngaro	8763	8855	55	+	.	.
scaffold1778	subtractBed	intrn	14009	14088	.	-	.	Parent=CGI_10002478;
	scaffold1778	TRF	Tandem_Repeat	14009	14088	142	+	.	.
scaffold1778	subtractBed	intrn	41330	41422	.	-	.	Parent=CGI_10002479;
	scaffold1778	WUBlastX	LTR_Copia	41330	41422	40	+	.	.
scaffold1778	subtractBed	intrn	41451	41714	.	-	.	Parent=CGI_10002479;
	scaffold1778	WUBlastX	LTR_Copia	41451	41714	31	+	.	.
scaffold1778	subtractBed	intrn	41318	41452	.	-	.	Parent=CGI_10002479;
	scaffold1778	WUBlastX	LTR_Copia	41318	41452	29	+	.	.
scaffold1779	subtractBed	intrn	26536	26594	.	-	.	Parent=CGI_10001860;
	scaffold1779	TRF	Tandem_Repeat	26536	26594	118	+	.	.
scaffold1779	subtractBed	intrn	27023	27086	.	-	.	Parent=CGI_10001860;
	scaffold1779	TRF	Tandem_Repeat	27023	27086	53	+	.	.
scaffold1779	subtractBed	intrn	25733	26212	.	-	.	Parent=CGI_10001860;
	scaffold1779	WUBlastX	DNA_Harbinger	25733	26212	212	-	.	.
scaffold178	subtractBed	intrn	58965	59025	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	58965	59025	70	+	.	.
scaffold178	subtractBed	intrn	58965	59013	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	58965	59013	66	+	.	.
scaffold178	subtractBed	intrn	58971	59026	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	58971	59026	53	+	.	.
scaffold178	subtractBed	intrn	58969	59027	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	58969	59027	64	+	.	.
scaffold178	subtractBed	intrn	83794	83865	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	83794	83865	144	+	.	.
scaffold178	subtractBed	intrn	84900	84941	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	84900	84941	84	+	.	.
scaffold178	subtractBed	intrn	86352	86416	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	86352	86416	58	+	.	.
scaffold178	subtractBed	intrn	86448	86527	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	86448	86527	65	+	.	.
scaffold178	subtractBed	intrn	89786	89850	.	-	.	Parent=CGI_10004826;
	scaffold178	TRF	Tandem_Repeat	89786	89850	112	+	.	.
scaffold178	subtractBed	intrn	97082	97108	.	-	.	Parent=CGI_10004828;
	scaffold178	TRF	Tandem_Repeat	97082	97108	54	+	.	.
scaffold178	subtractBed	intrn	104099	104686	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104099	104686	69	-	.	.
scaffold178	subtractBed	intrn	103887	104150	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	103887	104150	72	-	.	.
scaffold178	subtractBed	intrn	103716	104120	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	103716	104120	65	-	.	.
scaffold178	subtractBed	intrn	104102	104359	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104102	104359	96	-	.	.
scaffold178	subtractBed	intrn	104707	104865	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104707	104865	70	-	.	.
scaffold178	subtractBed	intrn	104931	105107	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104931	105107	48	-	.	.
scaffold178	subtractBed	intrn	104707	104895	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104707	104895	45	-	.	.
scaffold178	subtractBed	intrn	104689	104937	.	-	.	Parent=CGI_10004828;
	scaffold178	WUBlastX	LINE_Penelope	104689	104937	32	-	.	.
scaffold1780	subtractBed	intrn	33504	33558	.	-	.	Parent=CGI_10014544;
	scaffold1780	TRF	Tandem_Repeat	33504	33558	110	+	.	.
scaffold1780	subtractBed	intrn	65992	66025	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	65992	66025	50	+	.	.
scaffold1780	subtractBed	intrn	66328	66367	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	66328	66367	80	+	.	.
scaffold1780	subtractBed	intrn	66369	66408	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	66369	66408	57	+	.	.
scaffold1780	subtractBed	intrn	70227	70335	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	70227	70335	125	+	.	.
scaffold1780	subtractBed	intrn	71036	71094	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	71036	71094	91	+	.	.
scaffold1780	subtractBed	intrn	71040	71101	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	71040	71101	88	+	.	.
scaffold1780	subtractBed	intrn	71287	71489	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	71287	71489	187	+	.	.
scaffold1780	subtractBed	intrn	71259	71514	.	+	.	Parent=CGI_10014546;
	scaffold1780	TRF	Tandem_Repeat	71259	71514	494	+	.	.
scaffold1780	subtractBed	intrn	79724	80097	.	-	.	Parent=CGI_10014547;
	scaffold1780	TRF	Tandem_Repeat	79724	80097	658	+	.	.
scaffold1780	subtractBed	intrn	113538	113567	.	-	.	Parent=CGI_10014549;
	scaffold1780	TRF	Tandem_Repeat	113538	113567	60	+	.	.
scaffold1780	subtractBed	intrn	112718	112978	.	-	.	Parent=CGI_10014549;
	scaffold1780	WUBlastX	LINE_RTE-BovB	112718	112978	181	+	.	.
scaffold1780	subtractBed	intrn	111588	112832	.	-	.	Parent=CGI_10014549;
	scaffold1780	WUBlastX	LINE_RTE-BovB	111588	112832	981	+	.	.
scaffold1780	subtractBed	intrn	110602	110781	.	-	.	Parent=CGI_10014549;
	scaffold1780	WUBlastX	LINE_CR1	110602	110781	32	+	.	.
scaffold1780	subtractBed	intrn	111354	112319	.	-	.	Parent=CGI_10014549;
	scaffold1780	WUBlastX	LINE_L1	111354	112319	69	+	.	.
scaffold1780	subtractBed	intrn	148858	148889	.	-	.	Parent=CGI_10014550;
	scaffold1780	TRF	Tandem_Repeat	148858	148889	64	+	.	.
scaffold1780	subtractBed	intrn	149712	150370	.	-	.	Parent=CGI_10014550;
	scaffold1780	TRF	Tandem_Repeat	149712	150370	716	+	.	.
scaffold1780	subtractBed	intrn	169763	170017	.	-	.	Parent=CGI_10014552;
	scaffold1780	TRF	Tandem_Repeat	169763	170017	429	+	.	.
scaffold1780	subtractBed	intrn	170975	173938	.	-	.	Parent=CGI_10014552;
	scaffold1780	TRF	Tandem_Repeat	170975	173938	4235	+	.	.
scaffold1780	subtractBed	intrn	180789	180946	.	-	.	Parent=CGI_10014552;
	scaffold1780	TRF	Tandem_Repeat	180789	180946	235	+	.	.
scaffold1780	subtractBed	intrn	192526	192699	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	192526	192699	231	+	.	.
scaffold1780	subtractBed	intrn	193236	193998	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	193236	193998	642	+	.	.
scaffold1780	subtractBed	intrn	193236	193989	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	193236	193989	827	+	.	.
scaffold1780	subtractBed	intrn	194173	194342	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	194173	194342	189	+	.	.
scaffold1780	subtractBed	intrn	195698	195753	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	195698	195753	87	+	.	.
scaffold1780	subtractBed	intrn	200703	200866	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	200703	200876	137	+	.	.
scaffold1780	subtractBed	intrn	202899	203530	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	202899	203530	617	+	.	.
scaffold1780	subtractBed	intrn	202899	203530	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	202899	203530	617	+	.	.
scaffold1780	subtractBed	intrn	207945	208860	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	207945	208860	1309	+	.	.
scaffold1780	subtractBed	intrn	208856	208960	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	208856	208960	174	+	.	.
scaffold1780	subtractBed	intrn	208856	209247	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	208856	209247	511	+	.	.
scaffold1780	subtractBed	intrn	208961	209247	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	208961	209247	421	+	.	.
scaffold1780	subtractBed	intrn	213145	213710	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	213145	213710	718	+	.	.
scaffold1780	subtractBed	intrn	213704	213739	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	213704	213739	72	+	.	.
scaffold1780	subtractBed	intrn	214371	214629	.	+	.	Parent=CGI_10014553;
	scaffold1780	TRF	Tandem_Repeat	214371	214629	310	+	.	.
scaffold1780	subtractBed	intrn	230062	230165	.	+	.	Parent=CGI_10014554;
	scaffold1780	TRF	Tandem_Repeat	230062	230165	156	+	.	.
scaffold1780	subtractBed	intrn	232619	233689	.	+	.	Parent=CGI_10014554;
	scaffold1780	TRF	Tandem_Repeat	232619	233689	2007	+	.	.
scaffold1780	subtractBed	intrn	236040	236192	.	+	.	Parent=CGI_10014554;
	scaffold1780	TRF	Tandem_Repeat	236040	236192	279	+	.	.
scaffold1780	subtractBed	intrn	239530	239717	.	+	.	Parent=CGI_10014554;
	scaffold1780	TRF	Tandem_Repeat	239530	239717	82	+	.	.
scaffold1780	subtractBed	intrn	237075	240441	.	+	.	Parent=CGI_10014554;
	scaffold1780	TRF	Tandem_Repeat	237075	240441	5357	+	.	.
scaffold1780	subtractBed	intrn	256296	257137	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	256296	257172	1262	+	.	.
scaffold1780	subtractBed	intrn	259842	259965	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	259842	259965	59	+	.	.
scaffold1780	subtractBed	intrn	259842	260142	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	259842	260142	404	+	.	.
scaffold1780	subtractBed	intrn	260151	261061	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	260151	261061	1267	+	.	.
scaffold1780	subtractBed	intrn	260151	261061	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	260151	261061	1247	+	.	.
scaffold1780	subtractBed	intrn	260637	261009	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	260637	261009	109	+	.	.
scaffold1780	subtractBed	intrn	261813	262038	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	261813	262038	67	+	.	.
scaffold1780	subtractBed	intrn	261932	262060	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	261932	262060	87	+	.	.
scaffold1780	subtractBed	intrn	262728	262857	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	262728	262857	86	+	.	.
scaffold1780	subtractBed	intrn	261428	262895	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	261428	262895	279	+	.	.
scaffold1780	subtractBed	intrn	261541	262896	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	261541	262896	1957	+	.	.
scaffold1780	subtractBed	intrn	261541	262896	.	-	.	Parent=CGI_10014555;
	scaffold1780	TRF	Tandem_Repeat	261541	262896	1957	+	.	.
scaffold1780	subtractBed	intrn	265557	265950	.	-	.	Parent=CGI_10014556;
	scaffold1780	TRF	Tandem_Repeat	265557	265950	487	+	.	.
scaffold1780	subtractBed	intrn	265782	265911	.	-	.	Parent=CGI_10014556;
	scaffold1780	TRF	Tandem_Repeat	265782	265911	86	+	.	.
scaffold1780	subtractBed	intrn	279211	279312	.	+	.	Parent=CGI_10014557;
	scaffold1780	TRF	Tandem_Repeat	279211	279312	78	+	.	.
scaffold1780	subtractBed	intrn	279201	279304	.	+	.	Parent=CGI_10014557;
	scaffold1780	TRF	Tandem_Repeat	279201	279304	76	+	.	.
scaffold1780	subtractBed	intrn	281320	282142	.	+	.	Parent=CGI_10014557;
	scaffold1780	TRF	Tandem_Repeat	281320	282142	701	+	.	.
scaffold1780	subtractBed	intrn	283434	283612	.	+	.	Parent=CGI_10014557;
	scaffold1780	TRF	Tandem_Repeat	283434	283612	270	+	.	.
scaffold1780	subtractBed	intrn	340131	340189	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	340131	340189	118	+	.	.
scaffold1780	subtractBed	intrn	346023	346053	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	346023	346053	62	+	.	.
scaffold1780	subtractBed	intrn	348675	348855	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	348675	348855	147	+	.	.
scaffold1780	subtractBed	intrn	348712	348836	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	348712	348836	134	+	.	.
scaffold1780	subtractBed	intrn	350792	350831	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	350792	350831	80	+	.	.
scaffold1780	subtractBed	intrn	351643	351667	.	+	.	Parent=CGI_10014563;
	scaffold1780	TRF	Tandem_Repeat	351643	351667	50	+	.	.
scaffold1781	subtractBed	intrn	34398	34455	.	+	.	Parent=CGI_10004734;
	scaffold1781	TRF	Tandem_Repeat	34398	34455	73	+	.	.
scaffold1781	subtractBed	intrn	34399	34452	.	+	.	Parent=CGI_10004734;
	scaffold1781	TRF	Tandem_Repeat	34399	34452	56	+	.	.
scaffold1781	subtractBed	intrn	35878	36755	.	+	.	Parent=CGI_10004734;
	scaffold1781	TRF	Tandem_Repeat	35878	36755	1248	+	.	.
scaffold1781	subtractBed	intrn	63389	63434	.	-	.	Parent=CGI_10004736;
	scaffold1781	TRF	Tandem_Repeat	63389	63434	92	+	.	.
scaffold1781	subtractBed	intrn	70564	70611	.	-	.	Parent=CGI_10004737;
	scaffold1781	TRF	Tandem_Repeat	70564	70611	60	+	.	.
scaffold1781	subtractBed	intrn	70564	70611	.	-	.	Parent=CGI_10004737;
	scaffold1781	TRF	Tandem_Repeat	70564	70611	60	+	.	.
scaffold1781	subtractBed	intrn	70564	70611	.	-	.	Parent=CGI_10004737;
	scaffold1781	TRF	Tandem_Repeat	70564	70611	60	+	.	.
scaffold1781	subtractBed	intrn	70961	71010	.	-	.	Parent=CGI_10004737;
	scaffold1781	TRF	Tandem_Repeat	70961	71010	100	+	.	.
scaffold1781	subtractBed	intrn	78085	78140	.	-	.	Parent=CGI_10004737;
	scaffold1781	TRF	Tandem_Repeat	78085	78140	112	+	.	.
scaffold1782	subtractBed	intrn	10152	10300	.	-	.	Parent=CGI_10004240;
	scaffold1782	TRF	Tandem_Repeat	10152	10300	97	+	.	.
scaffold1782	subtractBed	intrn	10216	10362	.	-	.	Parent=CGI_10004240;
	scaffold1782	TRF	Tandem_Repeat	10216	10362	73	+	.	.
scaffold1782	subtractBed	intrn	11327	12088	.	-	.	Parent=CGI_10004240;
	scaffold1782	TRF	Tandem_Repeat	11327	12088	735	+	.	.
scaffold1782	subtractBed	intrn	12146	12189	.	-	.	Parent=CGI_10004240;
	scaffold1782	TRF	Tandem_Repeat	12146	12189	72	+	.	.
scaffold1782	subtractBed	intrn	17769	18077	.	-	.	Parent=CGI_10004240;
	scaffold1782	WUBlastX	DNA_Kolobok	17769	18077	82	-	.	.
scaffold1782	subtractBed	intrn	18615	18645	.	-	.	Parent=CGI_10004240;
	scaffold1782	WUBlastX	DNA_Kolobok	18615	18878	41	-	.	.
scaffold1782	subtractBed	intrn	19115	19231	.	-	.	Parent=CGI_10004240;
	scaffold1782	WUBlastX	DNA_Kolobok	19115	19231	37	-	.	.
scaffold1782	subtractBed	intrn	30764	31382	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	30764	31382	812	+	.	.
scaffold1782	subtractBed	intrn	32299	32623	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	32299	32623	321	+	.	.
scaffold1782	subtractBed	intrn	40371	40555	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	40371	40555	318	+	.	.
scaffold1782	subtractBed	intrn	35297	35536	.	+	.	Parent=CGI_10004241;
	scaffold1782	WUBlastX	DNA_Crypton	35297	35536	78	-	.	.
scaffold1782	subtractBed	intrn	35354	35971	.	+	.	Parent=CGI_10004241;
	scaffold1782	WUBlastX	DNA_Crypton	35354	35971	338	-	.	.
scaffold1782	subtractBed	intrn	41211	41616	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	41211	41616	794	+	.	.
scaffold1782	subtractBed	intrn	42319	42668	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	42319	42668	691	+	.	.
scaffold1782	subtractBed	intrn	44003	44512	.	+	.	Parent=CGI_10004241;
	scaffold1782	TRF	Tandem_Repeat	44003	44512	822	+	.	.
scaffold1785	subtractBed	intrn	20431	20874	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_L1	20431	20874	151	+	.	.
scaffold1785	subtractBed	intrn	20431	21000	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_L2	20431	21000	110	+	.	.
scaffold1785	subtractBed	intrn	21339	21446	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_I	21339	21446	21	+	.	.
scaffold1785	subtractBed	intrn	20416	21093	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_L1	20416	21093	45	+	.	.
scaffold1785	subtractBed	intrn	22792	23715	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22792	23715	162	+	.	.
scaffold1785	subtractBed	intrn	22792	23523	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22792	23523	162	+	.	.
scaffold1785	subtractBed	intrn	22157	22786	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_CR1	22157	22786	103	+	.	.
scaffold1785	subtractBed	intrn	22795	23307	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22795	23307	164	+	.	.
scaffold1785	subtractBed	intrn	22271	22798	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_L2	22271	22798	152	+	.	.
scaffold1785	subtractBed	intrn	22066	22365	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22066	22365	87	+	.	.
scaffold1785	subtractBed	intrn	22358	22780	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22358	22780	168	+	.	.
scaffold1785	subtractBed	intrn	22795	24087	.	-	.	Parent=CGI_10024349;
	scaffold1785	WUBlastX	LINE_RTE-X	22795	24087	108	+	.	.
scaffold1785	subtractBed	intrn	35066	37384	.	-	.	Parent=CGI_10024350;
	scaffold1785	WUBlastX	LINE_RTE-X	35066	37384	1064	+	.	.
scaffold1785	subtractBed	intrn	33190	33297	.	-	.	Parent=CGI_10024350;
	scaffold1785	WUBlastX	DNA_IS4EU	33190	33297	23	-	.	.
scaffold1785	subtractBed	intrn	67147	67396	.	-	.	Parent=CGI_10024355;
	scaffold1785	TRF	Tandem_Repeat	67147	67396	437	+	.	.
scaffold1785	subtractBed	intrn	94067	94862	.	-	.	Parent=CGI_10024356;
	scaffold1785	TRF	Tandem_Repeat	94067	94862	1251	+	.	.
scaffold1785	subtractBed	intrn	94893	94948	.	-	.	Parent=CGI_10024356;
	scaffold1785	TRF	Tandem_Repeat	94893	94948	67	+	.	.
scaffold1785	subtractBed	intrn	98498	98587	.	-	.	Parent=CGI_10024356;
	scaffold1785	TRF	Tandem_Repeat	98498	98587	57	+	.	.
scaffold1785	subtractBed	intrn	98525	98585	.	-	.	Parent=CGI_10024356;
	scaffold1785	TRF	Tandem_Repeat	98525	98585	52	+	.	.
scaffold1785	subtractBed	intrn	133603	133646	.	+	.	Parent=CGI_10024360;
	scaffold1785	TRF	Tandem_Repeat	133603	133646	52	+	.	.
scaffold1785	subtractBed	intrn	133603	133650	.	+	.	Parent=CGI_10024360;
	scaffold1785	TRF	Tandem_Repeat	133603	133650	69	+	.	.
scaffold1785	subtractBed	intrn	195906	196508	.	+	.	Parent=CGI_10024365;
	scaffold1785	TRF	Tandem_Repeat	195906	196508	623	+	.	.
scaffold1785	subtractBed	intrn	201133	201495	.	+	.	Parent=CGI_10024365;
	scaffold1785	TRF	Tandem_Repeat	201133	201495	572	+	.	.
scaffold1785	subtractBed	intrn	201273	201366	.	+	.	Parent=CGI_10024365;
	scaffold1785	TRF	Tandem_Repeat	201273	201366	60	+	.	.
scaffold1785	subtractBed	intrn	227537	227600	.	-	.	Parent=CGI_10024368;
	scaffold1785	TRF	Tandem_Repeat	227537	227600	101	+	.	.
scaffold1785	subtractBed	intrn	243691	243729	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	243691	243729	51	+	.	.
scaffold1785	subtractBed	intrn	243690	243733	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	243690	243733	61	+	.	.
scaffold1785	subtractBed	intrn	243741	244595	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	243741	244595	1550	+	.	.
scaffold1785	subtractBed	intrn	245293	245546	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	245293	245546	472	+	.	.
scaffold1785	subtractBed	intrn	246068	246096	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	246068	246096	58	+	.	.
scaffold1785	subtractBed	intrn	270418	270458	.	+	.	Parent=CGI_10024369;
	scaffold1785	TRF	Tandem_Repeat	270418	270458	82	+	.	.
scaffold1785	subtractBed	intrn	298921	299047	.	-	.	Parent=CGI_10024376;
	scaffold1785	TRF	Tandem_Repeat	298921	299047	209	+	.	.
scaffold1785	subtractBed	intrn	301030	301100	.	-	.	Parent=CGI_10024376;
	scaffold1785	TRF	Tandem_Repeat	301030	301100	72	+	.	.
scaffold1785	subtractBed	intrn	378113	378458	.	-	.	Parent=CGI_10024382;
	scaffold1785	TRF	Tandem_Repeat	378113	378458	584	+	.	.
scaffold1785	subtractBed	intrn	378522	378691	.	-	.	Parent=CGI_10024382;
	scaffold1785	TRF	Tandem_Repeat	378522	378691	331	+	.	.
scaffold1785	subtractBed	intrn	379506	379647	.	-	.	Parent=CGI_10024382;
	scaffold1785	TRF	Tandem_Repeat	379506	379647	275	+	.	.
scaffold1785	subtractBed	intrn	385092	385123	.	-	.	Parent=CGI_10024382;
	scaffold1785	TRF	Tandem_Repeat	385092	385123	64	+	.	.
scaffold1785	subtractBed	intrn	393827	394069	.	-	.	Parent=CGI_10024383;
	scaffold1785	TRF	Tandem_Repeat	393827	394069	432	+	.	.
scaffold1785	subtractBed	intrn	401993	402053	.	-	.	Parent=CGI_10024383;
	scaffold1785	TRF	Tandem_Repeat	401993	402053	122	+	.	.
scaffold1785	subtractBed	intrn	410733	410792	.	+	.	Parent=CGI_10024384;
	scaffold1785	TRF	Tandem_Repeat	410733	410792	102	+	.	.
scaffold1785	subtractBed	intrn	410997	411750	.	+	.	Parent=CGI_10024384;
	scaffold1785	TRF	Tandem_Repeat	410997	411750	1018	+	.	.
scaffold1785	subtractBed	intrn	434331	435020	.	-	.	Parent=CGI_10024386;
	scaffold1785	TRF	Tandem_Repeat	434331	435020	1335	+	.	.
scaffold1785	subtractBed	intrn	435868	436263	.	-	.	Parent=CGI_10024386;
	scaffold1785	TRF	Tandem_Repeat	435868	436263	783	+	.	.
scaffold1785	subtractBed	intrn	439393	439630	.	-	.	Parent=CGI_10024386;
	scaffold1785	TRF	Tandem_Repeat	439393	439630	134	+	.	.
scaffold1785	subtractBed	intrn	440510	440664	.	-	.	Parent=CGI_10024386;
	scaffold1785	TRF	Tandem_Repeat	440510	440664	134	+	.	.
scaffold1785	subtractBed	intrn	465689	465738	.	-	.	Parent=CGI_10024386;
	scaffold1785	TRF	Tandem_Repeat	465689	465738	100	+	.	.
scaffold1785	subtractBed	intrn	532546	532583	.	+	.	Parent=CGI_10024389;
	scaffold1785	TRF	Tandem_Repeat	532546	532583	76	+	.	.
scaffold1785	subtractBed	intrn	533532	533569	.	+	.	Parent=CGI_10024389;
	scaffold1785	TRF	Tandem_Repeat	533532	533569	76	+	.	.
scaffold1785	subtractBed	intrn	544164	544209	.	+	.	Parent=CGI_10024389;
	scaffold1785	TRF	Tandem_Repeat	544164	544209	92	+	.	.
scaffold1785	subtractBed	intrn	547291	548189	.	+	.	Parent=CGI_10024389;
	scaffold1785	TRF	Tandem_Repeat	547291	548189	835	+	.	.
scaffold1785	subtractBed	intrn	544242	544388	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_CR1	544242	544388	64	+	.	.
scaffold1785	subtractBed	intrn	544242	544427	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_CR1	544242	544427	62	+	.	.
scaffold1785	subtractBed	intrn	544486	544764	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_CR1-L2	544486	544764	161	+	.	.
scaffold1785	subtractBed	intrn	544441	544878	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_L2	544441	544878	99	+	.	.
scaffold1785	subtractBed	intrn	544420	544806	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_CR1-L2	544420	544806	139	+	.	.
scaffold1785	subtractBed	intrn	544776	545027	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_L2	544776	545027	37	+	.	.
scaffold1785	subtractBed	intrn	545035	545199	.	+	.	Parent=CGI_10024389;
	scaffold1785	WUBlastX	LINE_L2	545035	545199	36	+	.	.
scaffold1785	subtractBed	intrn	640757	640848	.	-	.	Parent=CGI_10024391;
	scaffold1785	TRF	Tandem_Repeat	640757	640848	184	+	.	.
scaffold1785	subtractBed	intrn	643515	643618	.	-	.	Parent=CGI_10024391;
	scaffold1785	TRF	Tandem_Repeat	643515	643618	79	+	.	.
scaffold1785	subtractBed	intrn	648723	649376	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	648723	649376	62	+	.	.
scaffold1785	subtractBed	intrn	648081	648188	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	648081	648188	32	+	.	.
scaffold1785	subtractBed	intrn	647907	648212	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	647907	648212	24	+	.	.
scaffold1785	subtractBed	intrn	648170	648412	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	648170	648412	24	+	.	.
scaffold1785	subtractBed	intrn	648167	648370	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	648167	648370	82	+	.	.
scaffold1785	subtractBed	intrn	648412	648558	.	-	.	Parent=CGI_10024391;
	scaffold1785	WUBlastX	LTR_Ngaro	648412	648558	26	+	.	.
scaffold1785	subtractBed	intrn	662485	662531	.	+	.	Parent=CGI_10024392;
	scaffold1785	TRF	Tandem_Repeat	662485	662531	94	+	.	.
scaffold1785	subtractBed	intrn	669828	669888	.	+	.	Parent=CGI_10024393;
	scaffold1785	TRF	Tandem_Repeat	669828	669888	122	+	.	.
scaffold1785	subtractBed	intrn	678468	678512	.	+	.	Parent=CGI_10024393;
	scaffold1785	TRF	Tandem_Repeat	678468	678512	90	+	.	.
scaffold1785	subtractBed	intrn	750684	750786	.	-	.	Parent=CGI_10024396;
	scaffold1785	TRF	Tandem_Repeat	750684	750786	147	+	.	.
scaffold1785	subtractBed	intrn	752782	752820	.	-	.	Parent=CGI_10024396;
	scaffold1785	TRF	Tandem_Repeat	752782	752820	78	+	.	.
scaffold1785	subtractBed	intrn	756457	756509	.	-	.	Parent=CGI_10024396;
	scaffold1785	TRF	Tandem_Repeat	756457	756509	99	+	.	.
scaffold1785	subtractBed	intrn	766372	766397	.	+	.	Parent=CGI_10024397;
	scaffold1785	TRF	Tandem_Repeat	766372	766397	52	+	.	.
scaffold1785	subtractBed	intrn	767853	767887	.	+	.	Parent=CGI_10024397;
	scaffold1785	TRF	Tandem_Repeat	767853	767887	70	+	.	.
scaffold1785	subtractBed	intrn	768218	768250	.	+	.	Parent=CGI_10024397;
	scaffold1785	TRF	Tandem_Repeat	768218	768250	66	+	.	.
scaffold1785	subtractBed	intrn	778299	779113	.	-	.	Parent=CGI_10024398;
	scaffold1785	TRF	Tandem_Repeat	778299	779113	785	+	.	.
scaffold1785	subtractBed	intrn	800262	800356	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	800262	800356	84	+	.	.
scaffold1785	subtractBed	intrn	804425	804503	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	804425	804503	86	+	.	.
scaffold1785	subtractBed	intrn	804425	804499	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	804425	804499	96	+	.	.
scaffold1785	subtractBed	intrn	804424	804511	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	804424	804511	59	+	.	.
scaffold1785	subtractBed	intrn	805683	806130	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	805683	806130	671	+	.	.
scaffold1785	subtractBed	intrn	811284	811330	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	811284	811330	94	+	.	.
scaffold1785	subtractBed	intrn	821116	821158	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	821116	821158	86	+	.	.
scaffold1785	subtractBed	intrn	823530	823629	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	823530	823629	173	+	.	.
scaffold1785	subtractBed	intrn	824605	824895	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	824605	824895	275	+	.	.
scaffold1785	subtractBed	intrn	824605	824943	.	-	.	Parent=CGI_10024400;
	scaffold1785	TRF	Tandem_Repeat	824605	824943	269	+	.	.
scaffold1785	subtractBed	intrn	843163	843819	.	-	.	Parent=CGI_10024401;
	scaffold1785	WUBlastX	LINE_L1-Tx1	843163	843819	191	+	.	.
scaffold1785	subtractBed	intrn	843815	844516	.	-	.	Parent=CGI_10024401;
	scaffold1785	WUBlastX	LINE_L1-Tx1	843815	844516	131	+	.	.
scaffold1785	subtractBed	intrn	843055	843504	.	-	.	Parent=CGI_10024401;
	scaffold1785	WUBlastX	LINE_L1	843055	843504	40	+	.	.
scaffold1785	subtractBed	intrn	848686	848739	.	-	.	Parent=CGI_10024401;
	scaffold1785	TRF	Tandem_Repeat	848686	848739	99	+	.	.
scaffold1785	subtractBed	intrn	851024	851113	.	-	.	Parent=CGI_10024401;
	scaffold1785	TRF	Tandem_Repeat	851024	851113	155	+	.	.
scaffold1785	subtractBed	intrn	854189	854220	.	-	.	Parent=CGI_10024401;
	scaffold1785	TRF	Tandem_Repeat	854189	854220	55	+	.	.
scaffold1785	subtractBed	intrn	854530	854567	.	-	.	Parent=CGI_10024401;
	scaffold1785	TRF	Tandem_Repeat	854530	854567	51	+	.	.
scaffold1785	subtractBed	intrn	909983	910016	.	-	.	Parent=CGI_10024406;
	scaffold1785	TRF	Tandem_Repeat	909983	910016	68	+	.	.
scaffold1785	subtractBed	intrn	911957	912028	.	-	.	Parent=CGI_10024406;
	scaffold1785	TRF	Tandem_Repeat	911957	912028	90	+	.	.
scaffold1785	subtractBed	intrn	909599	909844	.	-	.	Parent=CGI_10024406;
	scaffold1785	WUBlastX	DNA_Harbinger	909599	909844	125	-	.	.
scaffold1785	subtractBed	intrn	918475	918522	.	-	.	Parent=CGI_10024406;
	scaffold1785	TRF	Tandem_Repeat	918475	918522	96	+	.	.
scaffold1785	subtractBed	intrn	927511	927625	.	-	.	Parent=CGI_10024406;
	scaffold1785	WUBlastX	DNA_hAT-Ac	927511	927960	67	-	.	.
scaffold1785	subtractBed	intrn	927475	927625	.	-	.	Parent=CGI_10024406;
	scaffold1785	WUBlastX	DNA_hAT-Ac	927475	927816	75	-	.	.
scaffold1786	subtractBed	intrn	145154	145196	.	-	.	Parent=CGI_10008580;
	scaffold1786	TRF	Tandem_Repeat	145154	145196	77	+	.	.
scaffold1788	subtractBed	intrn	6482	8131	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	DNA_hAT-Tip100	6482	8131	265	+	.	.
scaffold1788	subtractBed	intrn	6293	7417	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	DNA_hAT-Tip100	6293	7417	492	+	.	.
scaffold1788	subtractBed	intrn	17987	18955	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_CR1-L2	17987	18955	606	+	.	.
scaffold1788	subtractBed	intrn	17847	18014	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_CR1-L2	17847	18014	89	+	.	.
scaffold1788	subtractBed	intrn	17721	17987	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_Rex-Babar	17721	17987	49	+	.	.
scaffold1788	subtractBed	intrn	18907	19641	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_CR1-L2	18907	19641	214	+	.	.
scaffold1788	subtractBed	intrn	17987	19150	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_L2	17987	19150	308	+	.	.
scaffold1788	subtractBed	intrn	17784	18011	.	+	.	Parent=CGI_10019910;
	scaffold1788	WUBlastX	LINE_CR1-L2	17784	18011	84	+	.	.
scaffold1788	subtractBed	intrn	45790	45939	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	RC_Helitron	45790	45939	68	-	.	.
scaffold1788	subtractBed	intrn	47228	47767	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	47228	47767	266	+	.	.
scaffold1788	subtractBed	intrn	46211	46294	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	RC_Helitron	46211	46294	25	-	.	.
scaffold1788	subtractBed	intrn	47120	47644	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1	47120	47644	162	+	.	.
scaffold1788	subtractBed	intrn	45566	45715	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	RC_Helitron	45566	45715	102	-	.	.
scaffold1788	subtractBed	intrn	47210	47650	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	47210	47650	360	+	.	.
scaffold1788	subtractBed	intrn	46187	46294	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Helitron	46187	46294	22	-	.	.
scaffold1788	subtractBed	intrn	45572	45745	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	RC_Helitron	45572	45745	50	-	.	.
scaffold1788	subtractBed	intrn	45691	45933	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	RC_Helitron	45691	45933	30	-	.	.
scaffold1788	subtractBed	intrn	49380	50501	.	-	.	Parent=CGI_10019913;
	scaffold1788	TRF	Tandem_Repeat	49380	50501	1449	+	.	.
scaffold1788	subtractBed	intrn	50595	50819	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	50595	50819	95	+	.	.
scaffold1788	subtractBed	intrn	51772	52269	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	51772	52269	88	+	.	.
scaffold1788	subtractBed	intrn	50855	51742	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	50855	51742	259	+	.	.
scaffold1788	subtractBed	intrn	53229	53552	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	53229	53552	60	-	.	.
scaffold1788	subtractBed	intrn	50580	50867	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	50580	50867	88	+	.	.
scaffold1788	subtractBed	intrn	51763	52188	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	51763	52188	104	+	.	.
scaffold1788	subtractBed	intrn	51760	52389	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	LINE_L1-Tx1	51760	52389	25	+	.	.
scaffold1788	subtractBed	intrn	56746	57120	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	56746	57120	208	-	.	.
scaffold1788	subtractBed	intrn	57825	57941	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	57825	57941	37	-	.	.
scaffold1788	subtractBed	intrn	57132	57293	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	57132	57293	115	-	.	.
scaffold1788	subtractBed	intrn	57161	57691	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	57161	57691	134	-	.	.
scaffold1788	subtractBed	intrn	57248	57763	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	57248	57763	219	-	.	.
scaffold1788	subtractBed	intrn	57825	57983	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Maverick	57825	57983	30	-	.	.
scaffold1788	subtractBed	intrn	64040	64144	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_IS4EU	64040	64144	55	+	.	.
scaffold1788	subtractBed	intrn	64680	64763	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_IS4EU	64680	64763	23	+	.	.
scaffold1788	subtractBed	intrn	65034	65135	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_IS4EU	65034	65135	63	+	.	.
scaffold1788	subtractBed	intrn	65013	65135	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Kolobok-IS4	65013	65135	40	+	.	.
scaffold1788	subtractBed	intrn	65321	66073	.	-	.	Parent=CGI_10019913;
	scaffold1788	WUBlastX	DNA_Kolobok-IS4	65321	66073	312	-	.	.
scaffold1788	subtractBed	intrn	145358	146269	.	+	.	Parent=CGI_10019917;
	scaffold1788	TRF	Tandem_Repeat	145358	146269	1565	+	.	.
scaffold1788	subtractBed	intrn	166496	166565	.	-	.	Parent=CGI_10019919;
	scaffold1788	TRF	Tandem_Repeat	166496	166565	68	+	.	.
scaffold1788	subtractBed	intrn	168305	168594	.	-	.	Parent=CGI_10019919;
	scaffold1788	TRF	Tandem_Repeat	168305	168647	614	+	.	.
scaffold1788	subtractBed	intrn	176519	176552	.	-	.	Parent=CGI_10019920;
	scaffold1788	TRF	Tandem_Repeat	176519	176552	68	+	.	.
scaffold1788	subtractBed	intrn	223946	223998	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	223946	223998	106	+	.	.
scaffold1788	subtractBed	intrn	224275	224318	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	224275	224318	88	+	.	.
scaffold1788	subtractBed	intrn	230802	230849	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	230802	230849	96	+	.	.
scaffold1788	subtractBed	intrn	250126	250160	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	250126	250160	70	+	.	.
scaffold1788	subtractBed	intrn	261960	262144	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	261960	262144	203	+	.	.
scaffold1788	subtractBed	intrn	261960	262199	.	+	.	Parent=CGI_10019921;
	scaffold1788	TRF	Tandem_Repeat	261960	262199	165	+	.	.
scaffold1788	subtractBed	intrn	297912	298008	.	-	.	Parent=CGI_10019922;
	scaffold1788	TRF	Tandem_Repeat	297912	298008	185	+	.	.
scaffold1788	subtractBed	intrn	331946	332004	.	-	.	Parent=CGI_10019923;
	scaffold1788	TRF	Tandem_Repeat	331946	332004	111	+	.	.
scaffold1788	subtractBed	intrn	336436	336475	.	-	.	Parent=CGI_10019924;
	scaffold1788	TRF	Tandem_Repeat	336436	336475	71	+	.	.
scaffold1788	subtractBed	intrn	340745	341499	.	-	.	Parent=CGI_10019924;
	scaffold1788	TRF	Tandem_Repeat	340745	341499	1151	+	.	.
scaffold1788	subtractBed	intrn	369127	369173	.	-	.	Parent=CGI_10019925;
	scaffold1788	TRF	Tandem_Repeat	369127	369173	94	+	.	.
scaffold1788	subtractBed	intrn	431235	431349	.	-	.	Parent=CGI_10019932;
	scaffold1788	TRF	Tandem_Repeat	431235	431349	169	+	.	.
scaffold1788	subtractBed	intrn	434081	434665	.	-	.	Parent=CGI_10019932;
	scaffold1788	TRF	Tandem_Repeat	434081	434701	872	+	.	.
scaffold1788	subtractBed	intrn	434081	434665	.	-	.	Parent=CGI_10019932;
	scaffold1788	TRF	Tandem_Repeat	434081	434701	917	+	.	.
scaffold1788	subtractBed	intrn	436944	436977	.	-	.	Parent=CGI_10019932;
	scaffold1788	TRF	Tandem_Repeat	436944	436977	68	+	.	.
scaffold1788	subtractBed	intrn	450665	450813	.	-	.	Parent=CGI_10019933;
	scaffold1788	TRF	Tandem_Repeat	450665	450813	97	+	.	.
scaffold1788	subtractBed	intrn	450729	450875	.	-	.	Parent=CGI_10019933;
	scaffold1788	TRF	Tandem_Repeat	450729	450875	73	+	.	.
scaffold1788	subtractBed	intrn	451820	452613	.	-	.	Parent=CGI_10019933;
	scaffold1788	TRF	Tandem_Repeat	451820	452613	734	+	.	.
scaffold1788	subtractBed	intrn	459934	459972	.	-	.	Parent=CGI_10019933;
	scaffold1788	TRF	Tandem_Repeat	459934	459972	78	+	.	.
scaffold1788	subtractBed	intrn	504434	504502	.	+	.	Parent=CGI_10019934;
	scaffold1788	TRF	Tandem_Repeat	504434	504502	65	+	.	.
scaffold1788	subtractBed	intrn	541465	542375	.	-	.	Parent=CGI_10019939;
	scaffold1788	TRF	Tandem_Repeat	541465	542375	1294	+	.	.
scaffold1788	subtractBed	intrn	595745	595774	.	+	.	Parent=CGI_10019941;
	scaffold1788	TRF	Tandem_Repeat	595745	595774	51	+	.	.
scaffold1788	subtractBed	intrn	600782	600910	.	+	.	Parent=CGI_10019941;
	scaffold1788	WUBlastX	LINE_R2-Hero	600782	601990	125	+	.	.
scaffold1789	subtractBed	intrn	10612	10654	.	+	.	Parent=CGI_10003175;
	scaffold1789	TRF	Tandem_Repeat	10612	10654	50	+	.	.
scaffold1789	subtractBed	intrn	10597	10654	.	+	.	Parent=CGI_10003175;
	scaffold1789	TRF	Tandem_Repeat	10597	10654	59	+	.	.
scaffold1789	subtractBed	intrn	14867	14906	.	+	.	Parent=CGI_10003175;
	scaffold1789	TRF	Tandem_Repeat	14867	14906	80	+	.	.
scaffold1789	subtractBed	intrn	15280	15280	.	+	.	Parent=CGI_10003175;
	scaffold1789	WUBlastX	DNA_Kolobok	15280	15531	43	+	.	.
scaffold1789	subtractBed	intrn	15497	15531	.	+	.	Parent=CGI_10003175;
	scaffold1789	WUBlastX	DNA_Kolobok	15280	15531	43	+	.	.
scaffold1789	subtractBed	intrn	15566	15820	.	+	.	Parent=CGI_10003175;
	scaffold1789	WUBlastX	DNA_Kolobok	15566	15820	92	+	.	.
scaffold1789	subtractBed	intrn	16837	17133	.	+	.	Parent=CGI_10003175;
	scaffold1789	WUBlastX	DNA_Kolobok	16837	17133	82	+	.	.
scaffold1789	subtractBed	intrn	17573	17899	.	+	.	Parent=CGI_10003175;
	scaffold1789	WUBlastX	DNA_Kolobok	17573	17899	93	-	.	.
scaffold1789	subtractBed	intrn	20668	20709	.	+	.	Parent=CGI_10003175;
	scaffold1789	TRF	Tandem_Repeat	20668	20709	52	+	.	.
scaffold1789	subtractBed	intrn	27632	27676	.	-	.	Parent=CGI_10003176;
	scaffold1789	TRF	Tandem_Repeat	27632	27676	90	+	.	.
scaffold1789	subtractBed	intrn	26345	26623	.	-	.	Parent=CGI_10003176;
	scaffold1789	WUBlastX	DNA_TcMar-Tc1	26345	26623	73	-	.	.
scaffold1789	subtractBed	intrn	26067	26219	.	-	.	Parent=CGI_10003176;
	scaffold1789	WUBlastX	DNA_TcMar-Tc1	26067	26219	69	-	.	.
scaffold1789	subtractBed	intrn	26218	26283	.	-	.	Parent=CGI_10003176;
	scaffold1789	WUBlastX	DNA_TcMar-Tc1	26218	26283	56	-	.	.
scaffold1789	subtractBed	intrn	26240	26605	.	-	.	Parent=CGI_10003176;
	scaffold1789	WUBlastX	DNA_TcMar-Tc1	26240	26605	61	-	.	.
scaffold1789	subtractBed	intrn	28483	28516	.	-	.	Parent=CGI_10003176;
	scaffold1789	TRF	Tandem_Repeat	28483	28516	50	+	.	.
scaffold1789	subtractBed	intrn	28833	28957	.	-	.	Parent=CGI_10003176;
	scaffold1789	TRF	Tandem_Repeat	28833	28957	189	+	.	.
scaffold1789	subtractBed	intrn	42110	42165	.	+	.	Parent=CGI_10003177;
	scaffold1789	TRF	Tandem_Repeat	42110	42165	94	+	.	.
scaffold1789	subtractBed	intrn	50716	50785	.	+	.	Parent=CGI_10003177;
	scaffold1789	TRF	Tandem_Repeat	50716	50785	72	+	.	.
scaffold1789	subtractBed	intrn	58243	58291	.	-	.	Parent=CGI_10003178;
	scaffold1789	TRF	Tandem_Repeat	58243	58291	98	+	.	.
scaffold1789	subtractBed	intrn	59511	59553	.	-	.	Parent=CGI_10003178;
	scaffold1789	TRF	Tandem_Repeat	59511	59553	86	+	.	.
scaffold1791	subtractBed	intrn	28373	28434	.	+	.	Parent=CGI_10007865;
	scaffold1791	TRF	Tandem_Repeat	28373	28434	115	+	.	.
scaffold1791	subtractBed	intrn	33419	33595	.	+	.	Parent=CGI_10007865;
	scaffold1791	TRF	Tandem_Repeat	33419	33595	156	+	.	.
scaffold1791	subtractBed	intrn	34009	34279	.	+	.	Parent=CGI_10007865;
	scaffold1791	TRF	Tandem_Repeat	34009	34279	116	+	.	.
scaffold1791	subtractBed	intrn	34008	34278	.	+	.	Parent=CGI_10007865;
	scaffold1791	TRF	Tandem_Repeat	34008	34278	233	+	.	.
scaffold1791	subtractBed	intrn	34060	34169	.	+	.	Parent=CGI_10007865;
	scaffold1791	TRF	Tandem_Repeat	34060	34169	104	+	.	.
scaffold1791	subtractBed	intrn	91662	91764	.	-	.	Parent=CGI_10007868;
	scaffold1791	TRF	Tandem_Repeat	91662	91764	161	+	.	.
scaffold1791	subtractBed	intrn	91662	91764	.	-	.	Parent=CGI_10007868;
	scaffold1791	TRF	Tandem_Repeat	91662	91764	161	+	.	.
scaffold1791	subtractBed	intrn	91662	91764	.	-	.	Parent=CGI_10007868;
	scaffold1791	TRF	Tandem_Repeat	91662	91764	161	+	.	.
scaffold1791	subtractBed	intrn	93524	93560	.	-	.	Parent=CGI_10007868;
	scaffold1791	TRF	Tandem_Repeat	93524	93560	74	+	.	.
scaffold1791	subtractBed	intrn	97092	97958	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	97092	97958	114	+	.	.
scaffold1791	subtractBed	intrn	97305	97916	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	97305	97916	185	+	.	.
scaffold1791	subtractBed	intrn	97278	97706	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	97278	97706	196	+	.	.
scaffold1791	subtractBed	intrn	100562	100831	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	100562	100831	100	+	.	.
scaffold1791	subtractBed	intrn	99465	100451	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	99465	100451	362	+	.	.
scaffold1791	subtractBed	intrn	97930	99558	.	-	.	Parent=CGI_10007868;
	scaffold1791	WUBlastX	LTR_Ngaro	97930	99558	997	+	.	.
scaffold1792	subtractBed	intrn	33247	33301	.	-	.	Parent=CGI_10012741;
	scaffold1792	TRF	Tandem_Repeat	33247	33301	110	+	.	.
scaffold1792	subtractBed	intrn	34771	34804	.	-	.	Parent=CGI_10012741;
	scaffold1792	TRF	Tandem_Repeat	34771	34804	59	+	.	.
scaffold1792	subtractBed	intrn	42192	42224	.	+	.	Parent=CGI_10012742;
	scaffold1792	TRF	Tandem_Repeat	42192	42224	66	+	.	.
scaffold1792	subtractBed	intrn	50923	50976	.	-	.	Parent=CGI_10012743;
	scaffold1792	TRF	Tandem_Repeat	50923	50976	108	+	.	.
scaffold1792	subtractBed	intrn	61910	61964	.	-	.	Parent=CGI_10012744;
	scaffold1792	TRF	Tandem_Repeat	61910	61964	110	+	.	.
scaffold1792	subtractBed	intrn	64096	64133	.	-	.	Parent=CGI_10012744;
	scaffold1792	TRF	Tandem_Repeat	64096	64133	58	+	.	.
scaffold1792	subtractBed	intrn	69486	69620	.	-	.	Parent=CGI_10012744;
	scaffold1792	WUBlastX	LINE_Penelope	69486	69620	35	+	.	.
scaffold1792	subtractBed	intrn	111267	111308	.	-	.	Parent=CGI_10012744;
	scaffold1792	TRF	Tandem_Repeat	111267	111308	84	+	.	.
scaffold1792	subtractBed	intrn	61910	61964	.	+	.	Parent=CGI_10012745;
	scaffold1792	TRF	Tandem_Repeat	61910	61964	110	+	.	.
scaffold1792	subtractBed	intrn	158667	158745	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	158667	158745	158	+	.	.
scaffold1792	subtractBed	intrn	162362	162402	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	162362	162402	64	+	.	.
scaffold1792	subtractBed	intrn	166725	167056	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	166725	167056	547	+	.	.
scaffold1792	subtractBed	intrn	173736	173777	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	173736	173777	77	+	.	.
scaffold1792	subtractBed	intrn	173736	173783	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	173736	173783	51	+	.	.
scaffold1792	subtractBed	intrn	178104	178159	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	178104	178159	85	+	.	.
scaffold1792	subtractBed	intrn	178931	178966	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	178931	178966	72	+	.	.
scaffold1792	subtractBed	intrn	181541	181842	.	+	.	Parent=CGI_10012746;
	scaffold1792	TRF	Tandem_Repeat	181515	181842	494	+	.	.
scaffold1792	subtractBed	intrn	210251	210543	.	-	.	Parent=CGI_10012747;
	scaffold1792	TRF	Tandem_Repeat	210251	210543	192	+	.	.
scaffold1792	subtractBed	intrn	210329	210543	.	-	.	Parent=CGI_10012747;
	scaffold1792	TRF	Tandem_Repeat	210329	210543	192	+	.	.
scaffold1792	subtractBed	intrn	260278	262065	.	-	.	Parent=CGI_10012749;
	scaffold1792	WUBlastX	LINE_RTE-X	260278	262065	762	+	.	.
scaffold1792	subtractBed	intrn	260047	261450	.	-	.	Parent=CGI_10012749;
	scaffold1792	WUBlastX	LINE_L2	260047	261450	235	+	.	.
scaffold1792	subtractBed	intrn	259229	259279	.	-	.	Parent=CGI_10012749;
	scaffold1792	WUBlastX	LINE_L2	259229	259279	26	+	.	.
scaffold1792	subtractBed	intrn	265759	265808	.	-	.	Parent=CGI_10012749;
	scaffold1792	TRF	Tandem_Repeat	265759	265808	100	+	.	.
scaffold1792	subtractBed	intrn	262326	262535	.	-	.	Parent=CGI_10012749;
	scaffold1792	WUBlastX	LINE_CR1	262326	262535	111	+	.	.
scaffold1792	subtractBed	intrn	262359	264071	.	-	.	Parent=CGI_10012749;
	scaffold1792	WUBlastX	LINE_RTE-X	262359	264071	692	+	.	.
scaffold1792	subtractBed	intrn	296943	297015	.	-	.	Parent=CGI_10012751;
	scaffold1792	TRF	Tandem_Repeat	296943	297015	146	+	.	.
scaffold1792	subtractBed	intrn	297043	297092	.	-	.	Parent=CGI_10012751;
	scaffold1792	TRF	Tandem_Repeat	297043	297092	75	+	.	.
scaffold1792	subtractBed	intrn	329256	329351	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	329256	329351	26	+	.	.
scaffold1792	subtractBed	intrn	329278	330099	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	329278	330099	237	+	.	.
scaffold1792	subtractBed	intrn	330103	330384	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	330103	330384	132	+	.	.
scaffold1792	subtractBed	intrn	331049	332011	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	331049	332011	170	+	.	.
scaffold1792	subtractBed	intrn	331097	331663	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	331097	331663	316	+	.	.
scaffold1792	subtractBed	intrn	330399	330614	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	330399	330614	162	+	.	.
scaffold1792	subtractBed	intrn	330628	331044	.	-	.	Parent=CGI_10012752;
	scaffold1792	WUBlastX	LTR_Gypsy	330628	331044	207	+	.	.
scaffold1794	subtractBed	intrn	13338	14111	.	+	.	Parent=CGI_10019563;
	scaffold1794	TRF	Tandem_Repeat	13338	14111	1303	+	.	.
scaffold1794	subtractBed	intrn	13338	14111	.	+	.	Parent=CGI_10019563;
	scaffold1794	TRF	Tandem_Repeat	13338	14111	1303	+	.	.
scaffold1794	subtractBed	intrn	13338	14111	.	+	.	Parent=CGI_10019563;
	scaffold1794	TRF	Tandem_Repeat	13338	14111	1303	+	.	.
scaffold1794	subtractBed	intrn	27452	27555	.	+	.	Parent=CGI_10019565;
	scaffold1794	TRF	Tandem_Repeat	27452	27555	109	+	.	.
scaffold1794	subtractBed	intrn	27880	28140	.	+	.	Parent=CGI_10019565;
	scaffold1794	WUBlastX	LINE_RTE-X	27880	28140	80	-	.	.
scaffold1794	subtractBed	intrn	27877	28092	.	+	.	Parent=CGI_10019565;
	scaffold1794	WUBlastX	LINE_RTE-X	27877	28092	96	-	.	.
scaffold1794	subtractBed	intrn	27751	28095	.	+	.	Parent=CGI_10019565;
	scaffold1794	WUBlastX	LINE_RTE-X	27751	28095	93	-	.	.
scaffold1794	subtractBed	intrn	32611	33075	.	+	.	Parent=CGI_10019565;
	scaffold1794	WUBlastX	LINE_L1-Tx1	32611	33075	48	-	.	.
scaffold1794	subtractBed	intrn	43159	43217	.	+	.	Parent=CGI_10019566;
	scaffold1794	TRF	Tandem_Repeat	43159	43217	57	+	.	.
scaffold1794	subtractBed	intrn	66669	67031	.	-	.	Parent=CGI_10019568;
	scaffold1794	WUBlastX	LINE_RTE-BovB	66669	67031	153	+	.	.
scaffold1794	subtractBed	intrn	75884	76001	.	+	.	Parent=CGI_10019569;
	scaffold1794	TRF	Tandem_Repeat	75884	76001	114	+	.	.
scaffold1794	subtractBed	intrn	75884	76003	.	+	.	Parent=CGI_10019569;
	scaffold1794	TRF	Tandem_Repeat	75884	76003	101	+	.	.
scaffold1794	subtractBed	intrn	76635	76759	.	+	.	Parent=CGI_10019569;
	scaffold1794	TRF	Tandem_Repeat	76635	76759	74	+	.	.
scaffold1794	subtractBed	intrn	102411	102727	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	102411	102727	79	+	.	.
scaffold1794	subtractBed	intrn	102406	102689	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	102406	102689	175	+	.	.
scaffold1794	subtractBed	intrn	102415	102760	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	102415	102760	507	+	.	.
scaffold1794	subtractBed	intrn	102907	103302	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	102907	103302	519	+	.	.
scaffold1794	subtractBed	intrn	104977	105126	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	104977	105126	162	+	.	.
scaffold1794	subtractBed	intrn	106492	106550	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	106492	106550	118	+	.	.
scaffold1794	subtractBed	intrn	107050	107409	.	+	.	Parent=CGI_10019571;
	scaffold1794	TRF	Tandem_Repeat	107019	107409	649	+	.	.
scaffold1794	subtractBed	intrn	126182	126279	.	-	.	Parent=CGI_10019573;
	scaffold1794	TRF	Tandem_Repeat	126182	126279	73	+	.	.
scaffold1794	subtractBed	intrn	126218	126288	.	-	.	Parent=CGI_10019573;
	scaffold1794	TRF	Tandem_Repeat	126218	126288	70	+	.	.
scaffold1794	subtractBed	intrn	160376	160608	.	+	.	Parent=CGI_10019575;
	scaffold1794	TRF	Tandem_Repeat	160333	160608	498	+	.	.
scaffold1794	subtractBed	intrn	165914	165951	.	+	.	Parent=CGI_10019575;
	scaffold1794	TRF	Tandem_Repeat	165914	165951	51	+	.	.
scaffold1794	subtractBed	intrn	169002	169363	.	+	.	Parent=CGI_10019575;
	scaffold1794	TRF	Tandem_Repeat	168970	169363	425	+	.	.
scaffold1794	subtractBed	intrn	218812	219736	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	218812	219736	1372	+	.	.
scaffold1794	subtractBed	intrn	226241	227166	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	226241	227166	1238	+	.	.
scaffold1794	subtractBed	intrn	227167	227635	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	227167	227635	688	+	.	.
scaffold1794	subtractBed	intrn	231757	232139	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	231757	232139	577	+	.	.
scaffold1794	subtractBed	intrn	237853	237982	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	237853	237982	93	+	.	.
scaffold1794	subtractBed	intrn	237898	238044	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	237898	238044	73	+	.	.
scaffold1794	subtractBed	intrn	239013	239780	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	239013	239780	736	+	.	.
scaffold1794	subtractBed	intrn	239826	239857	.	-	.	Parent=CGI_10019578;
	scaffold1794	TRF	Tandem_Repeat	239826	239857	55	+	.	.
scaffold1794	subtractBed	intrn	250990	251581	.	+	.	Parent=CGI_10019579;
	scaffold1794	TRF	Tandem_Repeat	250990	251581	734	+	.	.
scaffold1794	subtractBed	intrn	254675	254944	.	+	.	Parent=CGI_10019579;
	scaffold1794	TRF	Tandem_Repeat	254675	254944	364	+	.	.
scaffold1794	subtractBed	intrn	254998	255033	.	+	.	Parent=CGI_10019579;
	scaffold1794	TRF	Tandem_Repeat	254998	255033	54	+	.	.
scaffold1794	subtractBed	intrn	255202	256014	.	+	.	Parent=CGI_10019579;
	scaffold1794	TRF	Tandem_Repeat	255202	256014	1020	+	.	.
scaffold1794	subtractBed	intrn	257913	258114	.	+	.	Parent=CGI_10019579;
	scaffold1794	TRF	Tandem_Repeat	257913	258122	379	+	.	.
scaffold1794	subtractBed	intrn	265988	266125	.	-	.	Parent=CGI_10019582;
	scaffold1794	TRF	Tandem_Repeat	265988	266125	253	+	.	.
scaffold1794	subtractBed	intrn	267056	267171	.	-	.	Parent=CGI_10019582;
	scaffold1794	TRF	Tandem_Repeat	267056	267171	158	+	.	.
scaffold1794	subtractBed	intrn	267061	267138	.	-	.	Parent=CGI_10019582;
	scaffold1794	TRF	Tandem_Repeat	267061	267138	74	+	.	.
scaffold1794	subtractBed	intrn	267362	267880	.	-	.	Parent=CGI_10019582;
	scaffold1794	TRF	Tandem_Repeat	267362	267880	826	+	.	.
scaffold1794	subtractBed	intrn	295984	296354	.	-	.	Parent=CGI_10019585;
	scaffold1794	TRF	Tandem_Repeat	295984	296354	553	+	.	.
scaffold1794	subtractBed	intrn	298519	298632	.	-	.	Parent=CGI_10019585;
	scaffold1794	TRF	Tandem_Repeat	298519	298632	106	+	.	.
scaffold1794	subtractBed	intrn	301355	301406	.	-	.	Parent=CGI_10019585;
	scaffold1794	TRF	Tandem_Repeat	301355	301406	104	+	.	.
scaffold1794	subtractBed	intrn	306792	306816	.	-	.	Parent=CGI_10019585;
	scaffold1794	TRF	Tandem_Repeat	306792	306816	50	+	.	.
scaffold1794	subtractBed	intrn	345998	346328	.	+	.	Parent=CGI_10019588;
	scaffold1794	TRF	Tandem_Repeat	345998	346328	301	+	.	.
scaffold1794	subtractBed	intrn	351679	352783	.	+	.	Parent=CGI_10019588;
	scaffold1794	TRF	Tandem_Repeat	351679	352783	2104	+	.	.
scaffold1794	subtractBed	intrn	406819	406849	.	-	.	Parent=CGI_10019590;
	scaffold1794	TRF	Tandem_Repeat	406819	406849	53	+	.	.
scaffold1797	subtractBed	intrn	10044	10086	.	+	.	Parent=CGI_10002881;
	scaffold1797	TRF	Tandem_Repeat	10044	10086	79	+	.	.
scaffold1797	subtractBed	intrn	10133	10164	.	+	.	Parent=CGI_10002881;
	scaffold1797	TRF	Tandem_Repeat	10133	10164	64	+	.	.
scaffold1799	subtractBed	intrn	4601	4632	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	4601	4632	64	+	.	.
scaffold1799	subtractBed	intrn	17798	17904	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	17798	17904	124	+	.	.
scaffold1799	subtractBed	intrn	18111	18285	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	18111	18285	126	+	.	.
scaffold1799	subtractBed	intrn	18275	18553	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	18275	18553	107	+	.	.
scaffold1799	subtractBed	intrn	18224	18524	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	18224	18524	170	+	.	.
scaffold1799	subtractBed	intrn	16338	16591	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	16338	16591	61	+	.	.
scaffold1799	subtractBed	intrn	16374	16603	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	16374	16603	193	+	.	.
scaffold1799	subtractBed	intrn	16350	16603	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	16350	16603	216	+	.	.
scaffold1799	subtractBed	intrn	16320	16613	.	-	.	Parent=CGI_10003629;
	scaffold1799	TRF	Tandem_Repeat	16320	16613	190	+	.	.
scaffold1799	subtractBed	intrn	52623	52892	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	52623	52892	261	+	.	.
scaffold1799	subtractBed	intrn	53930	53974	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	53930	53974	81	+	.	.
scaffold1799	subtractBed	intrn	53982	54022	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	53982	54022	64	+	.	.
scaffold1799	subtractBed	intrn	54378	54457	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	54378	54457	153	+	.	.
scaffold1799	subtractBed	intrn	60025	60460	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	60025	60460	349	+	.	.
scaffold1799	subtractBed	intrn	60012	60424	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	60012	60424	307	+	.	.
scaffold1799	subtractBed	intrn	58956	59066	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	58956	59066	76	-	.	.
scaffold1799	subtractBed	intrn	58419	58781	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	58419	58781	88	-	.	.
scaffold1799	subtractBed	intrn	58772	58969	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	58772	58969	75	-	.	.
scaffold1799	subtractBed	intrn	59240	59566	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	59240	59566	229	-	.	.
scaffold1799	subtractBed	intrn	57831	57986	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	57831	57986	61	-	.	.
scaffold1799	subtractBed	intrn	57876	58031	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	57876	58031	81	-	.	.
scaffold1799	subtractBed	intrn	57855	58787	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	57855	58787	67	-	.	.
scaffold1799	subtractBed	intrn	59073	59267	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	59073	59267	97	-	.	.
scaffold1799	subtractBed	intrn	59575	60009	.	-	.	Parent=CGI_10003631;
	scaffold1799	WUBlastX	LTR_Ngaro	59575	60009	289	-	.	.
scaffold1799	subtractBed	intrn	65540	65583	.	-	.	Parent=CGI_10003631;
	scaffold1799	TRF	Tandem_Repeat	65540	65583	61	+	.	.
scaffold180	subtractBed	intrn	21802	21843	.	+	.	Parent=CGI_10004232;
	scaffold180	TRF	Tandem_Repeat	21802	21843	84	+	.	.
scaffold180	subtractBed	intrn	22020	22063	.	+	.	Parent=CGI_10004232;
	scaffold180	TRF	Tandem_Repeat	22020	22063	79	+	.	.
scaffold180	subtractBed	intrn	23210	23244	.	+	.	Parent=CGI_10004232;
	scaffold180	TRF	Tandem_Repeat	23210	23244	70	+	.	.
scaffold180	subtractBed	intrn	26701	26735	.	+	.	Parent=CGI_10004232;
	scaffold180	TRF	Tandem_Repeat	26701	26735	70	+	.	.
scaffold180	subtractBed	intrn	30626	30798	.	-	.	Parent=CGI_10004233;
	scaffold180	TRF	Tandem_Repeat	30626	30798	188	+	.	.
scaffold180	subtractBed	intrn	30876	31391	.	-	.	Parent=CGI_10004233;
	scaffold180	TRF	Tandem_Repeat	30876	31391	373	+	.	.
scaffold180	subtractBed	intrn	30881	31391	.	-	.	Parent=CGI_10004233;
	scaffold180	TRF	Tandem_Repeat	30881	31391	443	+	.	.
scaffold180	subtractBed	intrn	45386	45418	.	-	.	Parent=CGI_10004233;
	scaffold180	TRF	Tandem_Repeat	45386	45418	66	+	.	.
scaffold180	subtractBed	intrn	36993	37214	.	-	.	Parent=CGI_10004233;
	scaffold180	WUBlastX	RC_Helitron	36819	37214	71	-	.	.
scaffold1800	subtractBed	intrn	7175	7711	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy	7175	7711	75	+	.	.
scaffold1800	subtractBed	intrn	7906	8211	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy	7906	8211	61	+	.	.
scaffold1800	subtractBed	intrn	8011	8217	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	8011	8217	87	+	.	.
scaffold1800	subtractBed	intrn	8423	8662	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy	8423	8662	31	+	.	.
scaffold1800	subtractBed	intrn	6034	6642	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	6034	6642	384	+	.	.
scaffold1800	subtractBed	intrn	7151	7621	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	7151	7621	113	+	.	.
scaffold1800	subtractBed	intrn	8065	8253	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	8065	8253	120	+	.	.
scaffold1800	subtractBed	intrn	8232	8408	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	8232	8408	81	+	.	.
scaffold1800	subtractBed	intrn	8402	8575	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	8402	8575	70	+	.	.
scaffold1800	subtractBed	intrn	6034	7548	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Gypsy-Cigr	6034	7548	328	+	.	.
scaffold1800	subtractBed	intrn	16907	16956	.	+	.	Parent=CGI_10016397;
	scaffold1800	TRF	Tandem_Repeat	16907	16956	57	+	.	.
scaffold1800	subtractBed	intrn	17784	17867	.	+	.	Parent=CGI_10016397;
	scaffold1800	TRF	Tandem_Repeat	17784	17867	109	+	.	.
scaffold1800	subtractBed	intrn	32523	32945	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LINE_L1-Tx1	32523	32945	68	-	.	.
scaffold1800	subtractBed	intrn	32505	32834	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LINE_L1-Tx1	32505	32834	77	-	.	.
scaffold1800	subtractBed	intrn	45688	45724	.	+	.	Parent=CGI_10016397;
	scaffold1800	TRF	Tandem_Repeat	45688	45724	74	+	.	.
scaffold1800	subtractBed	intrn	47378	47455	.	+	.	Parent=CGI_10016397;
	scaffold1800	TRF	Tandem_Repeat	47378	47455	72	+	.	.
scaffold1800	subtractBed	intrn	55920	55927	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	DNA_P	55920	56039	77	+	.	.
scaffold1800	subtractBed	intrn	71953	72006	.	+	.	Parent=CGI_10016397;
	scaffold1800	TRF	Tandem_Repeat	71953	72006	108	+	.	.
scaffold1800	subtractBed	intrn	86821	86871	.	+	.	Parent=CGI_10016397;
	scaffold1800	WUBlastX	LTR_Copia	86821	86871	21	+	.	.
scaffold1800	subtractBed	intrn	106944	107234	.	-	.	Parent=CGI_10016398;
	scaffold1800	WUBlastX	LINE_CR1-L2	106944	107234	142	+	.	.
scaffold1800	subtractBed	intrn	107215	107853	.	-	.	Parent=CGI_10016398;
	scaffold1800	WUBlastX	LINE_CR1-L2	107215	107853	208	+	.	.
scaffold1800	subtractBed	intrn	106857	107192	.	-	.	Parent=CGI_10016398;
	scaffold1800	WUBlastX	LINE_CR1	106857	107192	52	+	.	.
scaffold1800	subtractBed	intrn	107013	107243	.	-	.	Parent=CGI_10016398;
	scaffold1800	WUBlastX	LINE_L2	107013	107243	172	+	.	.
scaffold1800	subtractBed	intrn	121730	122153	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	121730	122153	469	+	.	.
scaffold1800	subtractBed	intrn	122288	122551	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	122288	122551	456	+	.	.
scaffold1800	subtractBed	intrn	121733	122551	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	121733	122551	508	+	.	.
scaffold1800	subtractBed	intrn	123269	123317	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	123269	123317	62	+	.	.
scaffold1800	subtractBed	intrn	123347	124100	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	123347	124100	1101	+	.	.
scaffold1800	subtractBed	intrn	124103	124860	.	+	.	Parent=CGI_10016399;
	scaffold1800	TRF	Tandem_Repeat	124103	124860	1085	+	.	.
scaffold1800	subtractBed	intrn	149563	149593	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	149563	149593	62	+	.	.
scaffold1800	subtractBed	intrn	150973	151228	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	150973	151228	451	+	.	.
scaffold1800	subtractBed	intrn	150974	151228	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	150974	151228	186	+	.	.
scaffold1800	subtractBed	intrn	158098	158141	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	158098	158141	70	+	.	.
scaffold1800	subtractBed	intrn	171746	172027	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	171746	172027	474	+	.	.
scaffold1800	subtractBed	intrn	171766	172729	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	171766	172729	299	+	.	.
scaffold1800	subtractBed	intrn	172018	172729	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	172018	172729	844	+	.	.
scaffold1800	subtractBed	intrn	184707	185604	.	-	.	Parent=CGI_10016401;
	scaffold1800	TRF	Tandem_Repeat	184707	185604	1090	+	.	.
scaffold1800	subtractBed	intrn	213193	213227	.	-	.	Parent=CGI_10016402;
	scaffold1800	TRF	Tandem_Repeat	213193	213227	63	+	.	.
scaffold1800	subtractBed	intrn	222158	222259	.	-	.	Parent=CGI_10016403;
	scaffold1800	TRF	Tandem_Repeat	222158	222259	84	+	.	.
scaffold1800	subtractBed	intrn	222162	222280	.	-	.	Parent=CGI_10016403;
	scaffold1800	TRF	Tandem_Repeat	222162	222280	81	+	.	.
scaffold1800	subtractBed	intrn	222200	222289	.	-	.	Parent=CGI_10016403;
	scaffold1800	TRF	Tandem_Repeat	222200	222289	51	+	.	.
scaffold1800	subtractBed	intrn	259705	259851	.	-	.	Parent=CGI_10016404;
	scaffold1800	TRF	Tandem_Repeat	259705	259851	97	+	.	.
scaffold1800	subtractBed	intrn	261134	261194	.	-	.	Parent=CGI_10016404;
	scaffold1800	TRF	Tandem_Repeat	261134	261194	106	+	.	.
scaffold1800	subtractBed	intrn	262189	262302	.	-	.	Parent=CGI_10016404;
	scaffold1800	WUBlastX	LINE_CR1-L2	262189	262302	21	-	.	.
scaffold1800	subtractBed	intrn	262647	263030	.	-	.	Parent=CGI_10016404;
	scaffold1800	WUBlastX	LINE_CR1	262647	263030	96	-	.	.
scaffold1800	subtractBed	intrn	262710	262958	.	-	.	Parent=CGI_10016404;
	scaffold1800	WUBlastX	LINE_CR1	262710	262958	183	-	.	.
scaffold1800	subtractBed	intrn	262527	262958	.	-	.	Parent=CGI_10016404;
	scaffold1800	WUBlastX	LINE_CR1	262527	262958	140	-	.	.
scaffold1800	subtractBed	intrn	262239	262388	.	-	.	Parent=CGI_10016404;
	scaffold1800	WUBlastX	LINE_CR1	262239	262388	52	-	.	.
scaffold1800	subtractBed	intrn	310110	310313	.	+	.	Parent=CGI_10016406;
	scaffold1800	WUBlastX	LTR_Gypsy	310110	310313	30	+	.	.
scaffold1800	subtractBed	intrn	312853	313641	.	+	.	Parent=CGI_10016406;
	scaffold1800	WUBlastX	LTR_Gypsy	312853	313641	76	+	.	.
scaffold1800	subtractBed	intrn	312187	313521	.	+	.	Parent=CGI_10016406;
	scaffold1800	WUBlastX	LTR_Gypsy	312187	313521	894	+	.	.
scaffold1800	subtractBed	intrn	310155	312197	.	+	.	Parent=CGI_10016406;
	scaffold1800	WUBlastX	LTR_Gypsy	310155	312197	1308	+	.	.
scaffold1800	subtractBed	intrn	320158	320223	.	+	.	Parent=CGI_10016406;
	scaffold1800	TRF	Tandem_Repeat	320158	320223	132	+	.	.
scaffold1800	subtractBed	intrn	397473	397810	.	-	.	Parent=CGI_10016408;
	scaffold1800	TRF	Tandem_Repeat	397473	397810	414	+	.	.
scaffold1800	subtractBed	intrn	434590	434690	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	434590	434690	69	+	.	.
scaffold1800	subtractBed	intrn	434590	434690	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	434590	434690	91	+	.	.
scaffold1800	subtractBed	intrn	434925	434957	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	434925	434957	66	+	.	.
scaffold1800	subtractBed	intrn	435743	435783	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	435743	435783	82	+	.	.
scaffold1800	subtractBed	intrn	436018	436127	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	436018	436127	107	+	.	.
scaffold1800	subtractBed	intrn	439410	439744	.	+	.	Parent=CGI_10016413;
	scaffold1800	TRF	Tandem_Repeat	439410	439744	546	+	.	.
scaffold1801	subtractBed	intrn	4412	5649	.	+	.	Parent=CGI_10004347;
	scaffold1801	TRF	Tandem_Repeat	4412	5649	1534	+	.	.
scaffold1801	subtractBed	intrn	6446	6498	.	+	.	Parent=CGI_10004347;
	scaffold1801	TRF	Tandem_Repeat	6446	6498	88	+	.	.
scaffold1801	subtractBed	intrn	6446	6501	.	+	.	Parent=CGI_10004347;
	scaffold1801	TRF	Tandem_Repeat	6446	6501	58	+	.	.
scaffold1801	subtractBed	intrn	6446	6501	.	+	.	Parent=CGI_10004347;
	scaffold1801	TRF	Tandem_Repeat	6446	6501	76	+	.	.
scaffold1801	subtractBed	intrn	19559	19598	.	+	.	Parent=CGI_10004348;
	scaffold1801	TRF	Tandem_Repeat	19559	19598	62	+	.	.
scaffold1801	subtractBed	intrn	25672	25699	.	+	.	Parent=CGI_10004348;
	scaffold1801	TRF	Tandem_Repeat	25672	25699	56	+	.	.
scaffold1801	subtractBed	intrn	93552	93604	.	+	.	Parent=CGI_10004350;
	scaffold1801	TRF	Tandem_Repeat	93552	93604	106	+	.	.
scaffold1802	subtractBed	intrn	22722	22753	.	+	.	Parent=CGI_10007147;
	scaffold1802	TRF	Tandem_Repeat	22722	22753	57	+	.	.
scaffold1802	subtractBed	intrn	37460	37501	.	+	.	Parent=CGI_10007147;
	scaffold1802	TRF	Tandem_Repeat	37460	37501	84	+	.	.
scaffold1802	subtractBed	intrn	142755	142802	.	+	.	Parent=CGI_10007154;
	scaffold1802	TRF	Tandem_Repeat	142755	142802	96	+	.	.
scaffold1802	subtractBed	intrn	158182	158289	.	+	.	Parent=CGI_10007156;
	scaffold1802	TRF	Tandem_Repeat	158182	158289	128	+	.	.
scaffold1802	subtractBed	intrn	159300	159347	.	+	.	Parent=CGI_10007156;
	scaffold1802	TRF	Tandem_Repeat	159300	159347	87	+	.	.
scaffold1802	subtractBed	intrn	160873	160921	.	+	.	Parent=CGI_10007156;
	scaffold1802	TRF	Tandem_Repeat	160873	160921	98	+	.	.
scaffold1803	subtractBed	intrn	4274	4329	.	+	.	Parent=CGI_10014037;
	scaffold1803	TRF	Tandem_Repeat	4274	4329	94	+	.	.
scaffold1803	subtractBed	intrn	14343	14379	.	+	.	Parent=CGI_10014037;
	scaffold1803	TRF	Tandem_Repeat	14343	14379	74	+	.	.
scaffold1803	subtractBed	intrn	16950	16992	.	+	.	Parent=CGI_10014037;
	scaffold1803	TRF	Tandem_Repeat	16950	16992	86	+	.	.
scaffold1803	subtractBed	intrn	18548	18584	.	+	.	Parent=CGI_10014037;
	scaffold1803	TRF	Tandem_Repeat	18548	18584	65	+	.	.
scaffold1803	subtractBed	intrn	36764	37684	.	-	.	Parent=CGI_10014040;
	scaffold1803	WUBlastX	LINE_RTE-X	36764	37684	194	-	.	.
scaffold1803	subtractBed	intrn	43873	43920	.	-	.	Parent=CGI_10014040;
	scaffold1803	TRF	Tandem_Repeat	43873	43920	96	+	.	.
scaffold1803	subtractBed	intrn	46618	46660	.	-	.	Parent=CGI_10014040;
	scaffold1803	TRF	Tandem_Repeat	46618	46660	59	+	.	.
scaffold1803	subtractBed	intrn	73814	73861	.	-	.	Parent=CGI_10014042;
	scaffold1803	TRF	Tandem_Repeat	73814	73861	89	+	.	.
scaffold1803	subtractBed	intrn	98866	98968	.	+	.	Parent=CGI_10014044;
	scaffold1803	TRF	Tandem_Repeat	98866	98968	84	+	.	.
scaffold1803	subtractBed	intrn	131231	131298	.	+	.	Parent=CGI_10014047;
	scaffold1803	TRF	Tandem_Repeat	131231	131298	118	+	.	.
scaffold1803	subtractBed	intrn	243886	243939	.	+	.	Parent=CGI_10014051;
	scaffold1803	TRF	Tandem_Repeat	243886	243939	63	+	.	.
scaffold1803	subtractBed	intrn	243892	243939	.	+	.	Parent=CGI_10014051;
	scaffold1803	TRF	Tandem_Repeat	243892	243939	69	+	.	.
scaffold1803	subtractBed	intrn	280881	280922	.	-	.	Parent=CGI_10014054;
	scaffold1803	TRF	Tandem_Repeat	280881	280922	84	+	.	.
scaffold1803	subtractBed	intrn	302818	302893	.	+	.	Parent=CGI_10014056;
	scaffold1803	TRF	Tandem_Repeat	302818	302893	131	+	.	.
scaffold1803	subtractBed	intrn	315609	315640	.	+	.	Parent=CGI_10014056;
	scaffold1803	TRF	Tandem_Repeat	315609	315640	55	+	.	.
scaffold1803	subtractBed	intrn	326934	326965	.	+	.	Parent=CGI_10014057;
	scaffold1803	TRF	Tandem_Repeat	326934	326965	64	+	.	.
scaffold1803	subtractBed	intrn	344577	344691	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	344577	344691	90	+	.	.
scaffold1803	subtractBed	intrn	344543	344673	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	344543	344673	112	+	.	.
scaffold1803	subtractBed	intrn	344557	344736	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	344557	344736	124	+	.	.
scaffold1803	subtractBed	intrn	346974	347079	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	346974	347079	81	+	.	.
scaffold1803	subtractBed	intrn	349249	349383	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	349249	349383	98	+	.	.
scaffold1803	subtractBed	intrn	349267	349397	.	-	.	Parent=CGI_10014058;
	scaffold1803	TRF	Tandem_Repeat	349267	349397	112	+	.	.
scaffold1803	subtractBed	intrn	357244	357291	.	+	.	Parent=CGI_10014059;
	scaffold1803	TRF	Tandem_Repeat	357244	357291	55	+	.	.
scaffold1803	subtractBed	intrn	368876	368910	.	+	.	Parent=CGI_10014059;
	scaffold1803	TRF	Tandem_Repeat	368876	368910	70	+	.	.
scaffold1804	subtractBed	intrn	3465	3505	.	+	.	Parent=CGI_10013357;
	scaffold1804	TRF	Tandem_Repeat	3465	3505	82	+	.	.
scaffold1804	subtractBed	intrn	11140	11402	.	-	.	Parent=CGI_10013358;
	scaffold1804	TRF	Tandem_Repeat	11140	11402	463	+	.	.
scaffold1804	subtractBed	intrn	12217	12865	.	-	.	Parent=CGI_10013358;
	scaffold1804	TRF	Tandem_Repeat	12217	12865	953	+	.	.
scaffold1804	subtractBed	intrn	16608	16643	.	-	.	Parent=CGI_10013358;
	scaffold1804	TRF	Tandem_Repeat	16608	16643	63	+	.	.
scaffold1804	subtractBed	intrn	16366	16493	.	-	.	Parent=CGI_10013358;
	scaffold1804	TRF	Tandem_Repeat	16366	16493	238	+	.	.
scaffold1804	subtractBed	intrn	20017	20859	.	-	.	Parent=CGI_10013358;
	scaffold1804	TRF	Tandem_Repeat	20017	20859	972	+	.	.
scaffold1804	subtractBed	intrn	20017	20859	.	+	.	Parent=CGI_10013359;
	scaffold1804	TRF	Tandem_Repeat	20017	20859	972	+	.	.
scaffold1804	subtractBed	intrn	71184	71966	.	-	.	Parent=CGI_10013364;
	scaffold1804	TRF	Tandem_Repeat	71184	71966	817	+	.	.
scaffold1804	subtractBed	intrn	72137	72168	.	-	.	Parent=CGI_10013364;
	scaffold1804	TRF	Tandem_Repeat	72137	72168	55	+	.	.
scaffold1804	subtractBed	intrn	105469	105512	.	-	.	Parent=CGI_10013367;
	scaffold1804	TRF	Tandem_Repeat	105469	105512	88	+	.	.
scaffold1804	subtractBed	intrn	114806	115012	.	-	.	Parent=CGI_10013368;
	scaffold1804	TRF	Tandem_Repeat	114806	115012	118	+	.	.
scaffold1804	subtractBed	intrn	114838	115012	.	-	.	Parent=CGI_10013368;
	scaffold1804	TRF	Tandem_Repeat	114838	115012	93	+	.	.
scaffold1804	subtractBed	intrn	118835	118901	.	+	.	Parent=CGI_10013369;
	scaffold1804	TRF	Tandem_Repeat	118835	118901	98	+	.	.
scaffold1804	subtractBed	intrn	118835	118905	.	+	.	Parent=CGI_10013369;
	scaffold1804	TRF	Tandem_Repeat	118835	118905	79	+	.	.
scaffold1804	subtractBed	intrn	133757	136642	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	133757	136642	5772	+	.	.
scaffold1804	subtractBed	intrn	138019	138509	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	138019	138509	657	+	.	.
scaffold1804	subtractBed	intrn	140858	141136	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	140858	141136	425	+	.	.
scaffold1804	subtractBed	intrn	141170	141385	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	141170	141385	202	+	.	.
scaffold1804	subtractBed	intrn	150663	150930	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	150620	150930	536	+	.	.
scaffold1804	subtractBed	intrn	151143	151643	.	+	.	Parent=CGI_10013370;
	scaffold1804	TRF	Tandem_Repeat	151143	151643	822	+	.	.
scaffold1804	subtractBed	intrn	173660	174030	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	173660	174030	473	+	.	.
scaffold1804	subtractBed	intrn	174062	174669	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	174062	174669	370	+	.	.
scaffold1804	subtractBed	intrn	174130	174700	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	174130	174700	963	+	.	.
scaffold1804	subtractBed	intrn	175675	175710	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	175675	175710	72	+	.	.
scaffold1804	subtractBed	intrn	181799	182112	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	181799	182112	291	+	.	.
scaffold1804	subtractBed	intrn	183118	183199	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	183118	183199	157	+	.	.
scaffold1804	subtractBed	intrn	190238	190295	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	190238	190295	73	+	.	.
scaffold1804	subtractBed	intrn	190238	190289	.	-	.	Parent=CGI_10013373;
	scaffold1804	TRF	Tandem_Repeat	190238	190289	86	+	.	.
scaffold1804	subtractBed	intrn	197759	197811	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	197759	197811	106	+	.	.
scaffold1804	subtractBed	intrn	197973	198013	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	197973	198013	82	+	.	.
scaffold1804	subtractBed	intrn	201529	201591	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	201529	201591	126	+	.	.
scaffold1804	subtractBed	intrn	206633	206739	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	206633	206739	214	+	.	.
scaffold1804	subtractBed	intrn	208973	209014	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	208973	209014	66	+	.	.
scaffold1804	subtractBed	intrn	208961	209007	.	+	.	Parent=CGI_10013374;
	scaffold1804	TRF	Tandem_Repeat	208961	209007	58	+	.	.
scaffold1804	subtractBed	intrn	283542	284006	.	+	.	Parent=CGI_10013383;
	scaffold1804	WUBlastX	DNA_hAT-Blackja	283542	284006	82	+	.	.
scaffold1804	subtractBed	intrn	285923	286309	.	+	.	Parent=CGI_10013383;
	scaffold1804	WUBlastX	DNA_hAT-Blackja	285923	286309	93	+	.	.
scaffold1804	subtractBed	intrn	298147	298192	.	+	.	Parent=CGI_10013384;
	scaffold1804	TRF	Tandem_Repeat	298147	298192	51	+	.	.
scaffold1804	subtractBed	intrn	299776	299833	.	+	.	Parent=CGI_10013384;
	scaffold1804	TRF	Tandem_Repeat	299776	299833	82	+	.	.
scaffold1804	subtractBed	intrn	322505	322829	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	322505	322829	278	+	.	.
scaffold1804	subtractBed	intrn	322690	322809	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	322690	322809	83	+	.	.
scaffold1804	subtractBed	intrn	322702	322822	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	322702	322822	70	+	.	.
scaffold1804	subtractBed	intrn	323071	323611	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	323071	323611	622	+	.	.
scaffold1804	subtractBed	intrn	323432	323539	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	323432	323539	74	+	.	.
scaffold1804	subtractBed	intrn	323629	324094	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	323629	324094	524	+	.	.
scaffold1804	subtractBed	intrn	325093	325140	.	-	.	Parent=CGI_10013386;
	scaffold1804	TRF	Tandem_Repeat	325093	325140	69	+	.	.
scaffold1804	subtractBed	intrn	347437	347469	.	-	.	Parent=CGI_10013389;
	scaffold1804	TRF	Tandem_Repeat	347437	347469	57	+	.	.
scaffold1804	subtractBed	intrn	347477	347515	.	-	.	Parent=CGI_10013389;
	scaffold1804	TRF	Tandem_Repeat	347477	347515	78	+	.	.
scaffold1805	subtractBed	intrn	13045	13089	.	+	.	Parent=CGI_10012437;
	scaffold1805	TRF	Tandem_Repeat	13045	13089	81	+	.	.
scaffold1805	subtractBed	intrn	141246	141496	.	+	.	Parent=CGI_10012443;
	scaffold1805	TRF	Tandem_Repeat	141246	141496	259	+	.	.
scaffold1805	subtractBed	intrn	143152	143183	.	+	.	Parent=CGI_10012443;
	scaffold1805	TRF	Tandem_Repeat	143152	143183	55	+	.	.
scaffold1805	subtractBed	intrn	147708	147931	.	+	.	Parent=CGI_10012443;
	scaffold1805	TRF	Tandem_Repeat	147708	147931	335	+	.	.
scaffold1805	subtractBed	intrn	257236	257559	.	-	.	Parent=CGI_10012447;
	scaffold1805	TRF	Tandem_Repeat	257236	257559	551	+	.	.
scaffold1805	subtractBed	intrn	264219	264659	.	-	.	Parent=CGI_10012447;
	scaffold1805	TRF	Tandem_Repeat	264219	264659	503	+	.	.
scaffold1805	subtractBed	intrn	286530	286563	.	+	.	Parent=CGI_10012449;
	scaffold1805	TRF	Tandem_Repeat	286530	286563	68	+	.	.
scaffold1805	subtractBed	intrn	315028	315132	.	-	.	Parent=CGI_10012452;
	scaffold1805	TRF	Tandem_Repeat	315028	315132	174	+	.	.
scaffold1806	subtractBed	intrn	9623	9661	.	-	.	Parent=CGI_10006153;
	scaffold1806	TRF	Tandem_Repeat	9623	9661	64	+	.	.
scaffold1806	subtractBed	intrn	13701	13734	.	+	.	Parent=CGI_10006154;
	scaffold1806	TRF	Tandem_Repeat	13701	13734	68	+	.	.
scaffold1806	subtractBed	intrn	17059	17455	.	+	.	Parent=CGI_10006154;
	scaffold1806	TRF	Tandem_Repeat	17059	17455	378	+	.	.
scaffold1806	subtractBed	intrn	17059	17455	.	+	.	Parent=CGI_10006154;
	scaffold1806	TRF	Tandem_Repeat	17059	17455	340	+	.	.
scaffold1806	subtractBed	intrn	23698	23736	.	+	.	Parent=CGI_10006155;
	scaffold1806	TRF	Tandem_Repeat	23698	23736	53	+	.	.
scaffold1806	subtractBed	intrn	26623	26673	.	+	.	Parent=CGI_10006155;
	scaffold1806	TRF	Tandem_Repeat	26623	26673	102	+	.	.
scaffold1806	subtractBed	intrn	34721	35031	.	+	.	Parent=CGI_10006155;
	scaffold1806	TRF	Tandem_Repeat	34721	35031	378	+	.	.
scaffold1806	subtractBed	intrn	57726	57817	.	+	.	Parent=CGI_10006156;
	scaffold1806	TRF	Tandem_Repeat	57726	57817	175	+	.	.
scaffold1806	subtractBed	intrn	53072	54319	.	+	.	Parent=CGI_10006156;
	scaffold1806	WUBlastX	LTR_Gypsy	53072	54319	207	-	.	.
scaffold1806	subtractBed	intrn	55439	57166	.	+	.	Parent=CGI_10006156;
	scaffold1806	WUBlastX	LTR_Gypsy	55439	57166	954	-	.	.
scaffold1806	subtractBed	intrn	53261	56743	.	+	.	Parent=CGI_10006156;
	scaffold1806	WUBlastX	LTR_Gypsy	53261	56743	2768	-	.	.
scaffold1806	subtractBed	intrn	66350	66391	.	+	.	Parent=CGI_10006156;
	scaffold1806	TRF	Tandem_Repeat	66350	66391	50	+	.	.
scaffold1806	subtractBed	intrn	84394	84693	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	84394	84693	160	-	.	.
scaffold1806	subtractBed	intrn	84650	85675	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	84650	85675	575	-	.	.
scaffold1806	subtractBed	intrn	86367	87068	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	86367	87068	287	-	.	.
scaffold1806	subtractBed	intrn	86256	87182	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	86256	87182	201	-	.	.
scaffold1806	subtractBed	intrn	84677	86050	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	84677	86050	509	-	.	.
scaffold1806	subtractBed	intrn	84665	86323	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	84665	86323	474	-	.	.
scaffold1806	subtractBed	intrn	84280	84666	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LTR_Gypsy	84280	84666	117	-	.	.
scaffold1806	subtractBed	intrn	88937	89067	.	-	.	Parent=CGI_10006158;
	scaffold1806	WUBlastX	LINE_Penelope	88937	89194	21	+	.	.
scaffold1807	subtractBed	intrn	15949	15990	.	+	.	Parent=CGI_10004643;
	scaffold1807	TRF	Tandem_Repeat	15949	15990	50	+	.	.
scaffold1807	subtractBed	intrn	43278	43343	.	-	.	Parent=CGI_10004644;
	scaffold1807	TRF	Tandem_Repeat	43278	43343	55	+	.	.
scaffold1807	subtractBed	intrn	46900	47235	.	-	.	Parent=CGI_10004644;
	scaffold1807	WUBlastX	LTR_DIRS	46900	47235	97	+	.	.
scaffold1807	subtractBed	intrn	44531	45811	.	-	.	Parent=CGI_10004644;
	scaffold1807	WUBlastX	LTR_DIRS	44531	45811	106	+	.	.
scaffold1807	subtractBed	intrn	45808	46053	.	-	.	Parent=CGI_10004644;
	scaffold1807	WUBlastX	LTR_DIRS	45808	46053	92	+	.	.
scaffold1807	subtractBed	intrn	46056	46349	.	-	.	Parent=CGI_10004644;
	scaffold1807	WUBlastX	LTR_DIRS	46056	46349	51	+	.	.
scaffold1808	subtractBed	intrn	13996	14074	.	+	.	Parent=CGI_10008026;
	scaffold1808	TRF	Tandem_Repeat	13996	14074	151	+	.	.
scaffold1808	subtractBed	intrn	17522	17586	.	+	.	Parent=CGI_10008026;
	scaffold1808	TRF	Tandem_Repeat	17522	17586	130	+	.	.
scaffold1808	subtractBed	intrn	78245	78282	.	-	.	Parent=CGI_10008029;
	scaffold1808	TRF	Tandem_Repeat	78245	78282	51	+	.	.
scaffold1808	subtractBed	intrn	114813	115403	.	+	.	Parent=CGI_10008030;
	scaffold1808	WUBlastX	LINE_CR1-L2	114813	115403	24	+	.	.
scaffold1808	subtractBed	intrn	120548	120594	.	+	.	Parent=CGI_10008030;
	scaffold1808	TRF	Tandem_Repeat	120548	120594	85	+	.	.
scaffold1808	subtractBed	intrn	131304	131363	.	+	.	Parent=CGI_10008030;
	scaffold1808	TRF	Tandem_Repeat	131304	131363	111	+	.	.
scaffold1808	subtractBed	intrn	131367	131478	.	+	.	Parent=CGI_10008030;
	scaffold1808	TRF	Tandem_Repeat	131367	131478	89	+	.	.
scaffold1808	subtractBed	intrn	131385	131478	.	+	.	Parent=CGI_10008030;
	scaffold1808	TRF	Tandem_Repeat	131385	131478	107	+	.	.
scaffold1808	subtractBed	intrn	162275	162360	.	+	.	Parent=CGI_10008033;
	scaffold1808	TRF	Tandem_Repeat	162275	162360	172	+	.	.
scaffold181	subtractBed	intrn	26565	26720	.	+	.	Parent=CGI_10003023;
	scaffold181	WUBlastX	LINE_CR1-L2	26565	26720	54	+	.	.
scaffold1810	subtractBed	intrn	7492	7536	.	+	.	Parent=CGI_10007553;
	scaffold1810	WUBlastX	DNA_Sola	7444	7536	20	+	.	.
scaffold1810	subtractBed	intrn	8123	8248	.	+	.	Parent=CGI_10007553;
	scaffold1810	WUBlastX	DNA_Sola	8123	8248	86	+	.	.
scaffold1810	subtractBed	intrn	21543	21630	.	-	.	Parent=CGI_10007555;
	scaffold1810	TRF	Tandem_Repeat	21543	21630	115	+	.	.
scaffold1810	subtractBed	intrn	73614	73847	.	+	.	Parent=CGI_10007558;
	scaffold1810	TRF	Tandem_Repeat	73614	73847	161	+	.	.
scaffold1810	subtractBed	intrn	73668	73971	.	+	.	Parent=CGI_10007558;
	scaffold1810	TRF	Tandem_Repeat	73668	73971	179	+	.	.
scaffold1810	subtractBed	intrn	144911	145747	.	+	.	Parent=CGI_10007560;
	scaffold1810	TRF	Tandem_Repeat	144911	145747	977	+	.	.
scaffold1812	subtractBed	intrn	31454	31563	.	-	.	Parent=CGI_10004688;
	scaffold1812	TRF	Tandem_Repeat	31454	31563	114	+	.	.
scaffold1812	subtractBed	intrn	32068	32415	.	-	.	Parent=CGI_10004688;
	scaffold1812	WUBlastX	LINE_L2	32068	32415	22	+	.	.
scaffold1812	subtractBed	intrn	37326	37481	.	-	.	Parent=CGI_10004688;
	scaffold1812	WUBlastX	LINE_RTE-X	37326	37481	38	-	.	.
scaffold1812	subtractBed	intrn	37488	37598	.	-	.	Parent=CGI_10004688;
	scaffold1812	WUBlastX	LINE_RTE-X	37488	37598	62	-	.	.
scaffold1812	subtractBed	intrn	69509	69542	.	+	.	Parent=CGI_10004690;
	scaffold1812	TRF	Tandem_Repeat	69509	69542	50	+	.	.
scaffold1812	subtractBed	intrn	72377	72446	.	+	.	Parent=CGI_10004690;
	scaffold1812	TRF	Tandem_Repeat	72377	72446	97	+	.	.
scaffold1812	subtractBed	intrn	72376	72446	.	+	.	Parent=CGI_10004690;
	scaffold1812	TRF	Tandem_Repeat	72376	72446	117	+	.	.
scaffold1813	subtractBed	intrn	10963	11013	.	+	.	Parent=CGI_10005987;
	scaffold1813	TRF	Tandem_Repeat	10963	11013	102	+	.	.
scaffold1813	subtractBed	intrn	18318	18470	.	+	.	Parent=CGI_10005988;
	scaffold1813	TRF	Tandem_Repeat	18318	18470	200	+	.	.
scaffold1813	subtractBed	intrn	20718	20753	.	+	.	Parent=CGI_10005988;
	scaffold1813	TRF	Tandem_Repeat	20718	20753	63	+	.	.
scaffold1813	subtractBed	intrn	40869	40941	.	+	.	Parent=CGI_10005990;
	scaffold1813	TRF	Tandem_Repeat	40869	40941	101	+	.	.
scaffold1813	subtractBed	intrn	41352	41464	.	+	.	Parent=CGI_10005990;
	scaffold1813	TRF	Tandem_Repeat	41352	41464	174	+	.	.
scaffold1813	subtractBed	intrn	39704	40065	.	+	.	Parent=CGI_10005990;
	scaffold1813	WUBlastX	LINE_L1	39487	40065	42	+	.	.
scaffold1813	subtractBed	intrn	112669	113073	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_RTE-X	112669	113073	27	-	.	.
scaffold1813	subtractBed	intrn	113159	113311	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_RTE-X	113159	113311	22	-	.	.
scaffold1813	subtractBed	intrn	113251	113511	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_RTE-X	113251	113511	28	-	.	.
scaffold1813	subtractBed	intrn	113201	113461	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_RTE-X	113201	113461	27	-	.	.
scaffold1813	subtractBed	intrn	113302	113505	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_L2	113302	113505	35	-	.	.
scaffold1813	subtractBed	intrn	112714	113055	.	+	.	Parent=CGI_10005994;
	scaffold1813	WUBlastX	LINE_RTE-X	112714	113055	60	-	.	.
scaffold1814	subtractBed	intrn	19763	19822	.	-	.	Parent=CGI_10003975;
	scaffold1814	TRF	Tandem_Repeat	19763	19822	57	+	.	.
scaffold1814	subtractBed	intrn	18517	19611	.	-	.	Parent=CGI_10003975;
	scaffold1814	WUBlastX	LINE_RTE-X	18517	19611	370	+	.	.
scaffold1815	subtractBed	intrn	17946	18036	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	17946	18036	155	+	.	.
scaffold1815	subtractBed	intrn	17986	18091	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	17986	18091	95	+	.	.
scaffold1815	subtractBed	intrn	19503	19609	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	19503	19609	133	+	.	.
scaffold1815	subtractBed	intrn	30095	30133	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	30095	30133	60	+	.	.
scaffold1815	subtractBed	intrn	32231	32297	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	32231	32297	71	+	.	.
scaffold1815	subtractBed	intrn	32792	32825	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	32792	32825	68	+	.	.
scaffold1815	subtractBed	intrn	32823	32855	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	32823	32855	66	+	.	.
scaffold1815	subtractBed	intrn	33043	33089	.	-	.	Parent=CGI_10010259;
	scaffold1815	TRF	Tandem_Repeat	33043	33089	94	+	.	.
scaffold1815	subtractBed	intrn	32231	32297	.	+	.	Parent=CGI_10010260;
	scaffold1815	TRF	Tandem_Repeat	32231	32297	71	+	.	.
scaffold1815	subtractBed	intrn	32792	32825	.	+	.	Parent=CGI_10010260;
	scaffold1815	TRF	Tandem_Repeat	32792	32825	68	+	.	.
scaffold1815	subtractBed	intrn	32823	32855	.	+	.	Parent=CGI_10010260;
	scaffold1815	TRF	Tandem_Repeat	32823	32855	66	+	.	.
scaffold1815	subtractBed	intrn	33043	33089	.	+	.	Parent=CGI_10010260;
	scaffold1815	TRF	Tandem_Repeat	33043	33089	94	+	.	.
scaffold1815	subtractBed	intrn	35478	35544	.	+	.	Parent=CGI_10010260;
	scaffold1815	TRF	Tandem_Repeat	35478	35544	89	+	.	.
scaffold1815	subtractBed	intrn	44902	45222	.	+	.	Parent=CGI_10010261;
	scaffold1815	WUBlastX	LTR_Pao	44902	45222	34	-	.	.
scaffold1815	subtractBed	intrn	44965	46344	.	+	.	Parent=CGI_10010261;
	scaffold1815	WUBlastX	LTR_Pao	44965	46344	735	-	.	.
scaffold1815	subtractBed	intrn	46347	47381	.	+	.	Parent=CGI_10010261;
	scaffold1815	WUBlastX	LTR_Pao	46347	47381	163	-	.	.
scaffold1815	subtractBed	intrn	45259	46722	.	+	.	Parent=CGI_10010261;
	scaffold1815	WUBlastX	LTR_Pao	45259	46722	629	-	.	.
scaffold1815	subtractBed	intrn	106383	106431	.	-	.	Parent=CGI_10010265;
	scaffold1815	TRF	Tandem_Repeat	106383	106431	98	+	.	.
scaffold1815	subtractBed	intrn	170698	170724	.	-	.	Parent=CGI_10010267;
	scaffold1815	TRF	Tandem_Repeat	170698	170724	54	+	.	.
scaffold1815	subtractBed	intrn	170910	170960	.	-	.	Parent=CGI_10010267;
	scaffold1815	TRF	Tandem_Repeat	170910	170960	50	+	.	.
scaffold1815	subtractBed	intrn	170917	170962	.	-	.	Parent=CGI_10010267;
	scaffold1815	TRF	Tandem_Repeat	170917	170962	56	+	.	.
scaffold1815	subtractBed	intrn	220450	220963	.	+	.	Parent=CGI_10010270;
	scaffold1815	TRF	Tandem_Repeat	220450	220963	902	+	.	.
scaffold1815	subtractBed	intrn	223446	223498	.	+	.	Parent=CGI_10010270;
	scaffold1815	TRF	Tandem_Repeat	223446	223498	79	+	.	.
scaffold1815	subtractBed	intrn	223446	223498	.	+	.	Parent=CGI_10010270;
	scaffold1815	TRF	Tandem_Repeat	223446	223498	83	+	.	.
scaffold1815	subtractBed	intrn	227709	228189	.	+	.	Parent=CGI_10010270;
	scaffold1815	TRF	Tandem_Repeat	227709	228189	305	+	.	.
scaffold1815	subtractBed	intrn	232170	232774	.	+	.	Parent=CGI_10010270;
	scaffold1815	TRF	Tandem_Repeat	232170	232774	991	+	.	.
scaffold1816	subtractBed	intrn	39562	39607	.	+	.	Parent=CGI_10014392;
	scaffold1816	TRF	Tandem_Repeat	39562	39607	65	+	.	.
scaffold1816	subtractBed	intrn	39660	39693	.	+	.	Parent=CGI_10014392;
	scaffold1816	TRF	Tandem_Repeat	39660	39693	59	+	.	.
scaffold1816	subtractBed	intrn	49368	49439	.	-	.	Parent=CGI_10014393;
	scaffold1816	TRF	Tandem_Repeat	49368	49439	80	+	.	.
scaffold1816	subtractBed	intrn	50384	50481	.	-	.	Parent=CGI_10014393;
	scaffold1816	TRF	Tandem_Repeat	50384	50481	151	+	.	.
scaffold1816	subtractBed	intrn	69747	70091	.	-	.	Parent=CGI_10014394;
	scaffold1816	TRF	Tandem_Repeat	69747	70091	210	+	.	.
scaffold1816	subtractBed	intrn	96570	96615	.	-	.	Parent=CGI_10014397;
	scaffold1816	TRF	Tandem_Repeat	96570	96615	67	+	.	.
scaffold1816	subtractBed	intrn	99025	99049	.	-	.	Parent=CGI_10014397;
	scaffold1816	TRF	Tandem_Repeat	99025	99049	50	+	.	.
scaffold1816	subtractBed	intrn	117805	117829	.	+	.	Parent=CGI_10014398;
	scaffold1816	TRF	Tandem_Repeat	117805	117829	50	+	.	.
scaffold1816	subtractBed	intrn	120392	120625	.	+	.	Parent=CGI_10014398;
	scaffold1816	WUBlastX	RC_Helitron	120392	120625	49	+	.	.
scaffold1816	subtractBed	intrn	120124	120390	.	+	.	Parent=CGI_10014398;
	scaffold1816	WUBlastX	LINE_L2	120124	120390	38	+	.	.
scaffold1816	subtractBed	intrn	120106	120333	.	+	.	Parent=CGI_10014398;
	scaffold1816	WUBlastX	LINE_L2	120106	120333	46	+	.	.
scaffold1816	subtractBed	intrn	206738	206765	.	+	.	Parent=CGI_10014402;
	scaffold1816	TRF	Tandem_Repeat	206738	206765	56	+	.	.
scaffold1816	subtractBed	intrn	206919	206943	.	+	.	Parent=CGI_10014402;
	scaffold1816	TRF	Tandem_Repeat	206919	206943	50	+	.	.
scaffold1816	subtractBed	intrn	208183	208353	.	+	.	Parent=CGI_10014402;
	scaffold1816	WUBlastX	DNA_Kolobok	208183	208353	32	+	.	.
scaffold1816	subtractBed	intrn	209255	209371	.	+	.	Parent=CGI_10014402;
	scaffold1816	WUBlastX	DNA_Kolobok	209255	209371	43	+	.	.
scaffold1816	subtractBed	intrn	209159	209353	.	+	.	Parent=CGI_10014402;
	scaffold1816	WUBlastX	DNA_Kolobok	209159	209353	86	+	.	.
scaffold1816	subtractBed	intrn	230581	230672	.	+	.	Parent=CGI_10014404;
	scaffold1816	TRF	Tandem_Repeat	230581	230672	142	+	.	.
scaffold1816	subtractBed	intrn	230813	230909	.	+	.	Parent=CGI_10014404;
	scaffold1816	TRF	Tandem_Repeat	230813	230909	106	+	.	.
scaffold1816	subtractBed	intrn	276455	276580	.	+	.	Parent=CGI_10014406;
	scaffold1816	TRF	Tandem_Repeat	276455	276580	225	+	.	.
scaffold1816	subtractBed	intrn	279117	279171	.	+	.	Parent=CGI_10014406;
	scaffold1816	TRF	Tandem_Repeat	279117	279171	110	+	.	.
scaffold1816	subtractBed	intrn	350818	351025	.	-	.	Parent=CGI_10014411;
	scaffold1816	TRF	Tandem_Repeat	350818	351025	265	+	.	.
scaffold1816	subtractBed	intrn	353082	353108	.	-	.	Parent=CGI_10014411;
	scaffold1816	TRF	Tandem_Repeat	353082	353108	54	+	.	.
scaffold1816	subtractBed	intrn	357055	357156	.	-	.	Parent=CGI_10014411;
	scaffold1816	TRF	Tandem_Repeat	357055	357156	159	+	.	.
scaffold1816	subtractBed	intrn	357055	357156	.	-	.	Parent=CGI_10014411;
	scaffold1816	TRF	Tandem_Repeat	357055	357156	179	+	.	.
scaffold1817	subtractBed	intrn	18989	19038	.	-	.	Parent=CGI_10005250;
	scaffold1817	TRF	Tandem_Repeat	18989	19038	100	+	.	.
scaffold1817	subtractBed	intrn	17748	18128	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LINE_L1-Tx1	17748	18128	99	+	.	.
scaffold1817	subtractBed	intrn	18119	18400	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LINE_L1-Tx1	18119	18400	91	+	.	.
scaffold1817	subtractBed	intrn	17588	17683	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LINE_L1-Tx1	17588	17683	27	+	.	.
scaffold1817	subtractBed	intrn	17640	18032	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LINE_L1-Tx1	17640	18032	45	+	.	.
scaffold1817	subtractBed	intrn	16353	16541	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LINE_L1-Tx1	16353	16541	44	+	.	.
scaffold1817	subtractBed	intrn	24829	25320	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Gypsy	24829	25320	76	+	.	.
scaffold1817	subtractBed	intrn	24048	24665	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Gypsy	24048	24665	145	+	.	.
scaffold1817	subtractBed	intrn	24940	28668	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Gypsy-Cigr	24940	28668	1367	+	.	.
scaffold1817	subtractBed	intrn	24666	24767	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Gypsy	24666	24767	20	+	.	.
scaffold1817	subtractBed	intrn	28480	28845	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Copia	28480	28845	45	+	.	.
scaffold1817	subtractBed	intrn	23955	24503	.	-	.	Parent=CGI_10005250;
	scaffold1817	WUBlastX	LTR_Gypsy-Cigr	23955	24503	47	+	.	.
scaffold1817	subtractBed	intrn	36936	36970	.	-	.	Parent=CGI_10005250;
	scaffold1817	TRF	Tandem_Repeat	36936	36970	52	+	.	.
scaffold1817	subtractBed	intrn	44076	44113	.	-	.	Parent=CGI_10005250;
	scaffold1817	TRF	Tandem_Repeat	44076	44113	51	+	.	.
scaffold1818	subtractBed	intrn	20640	21787	.	-	.	Parent=CGI_10003625;
	scaffold1818	TRF	Tandem_Repeat	20640	21787	1155	+	.	.
scaffold1818	subtractBed	intrn	42744	42893	.	-	.	Parent=CGI_10003625;
	scaffold1818	WUBlastX	DNA_Zator	42744	42893	46	-	.	.
scaffold1818	subtractBed	intrn	53337	54350	.	-	.	Parent=CGI_10003625;
	scaffold1818	TRF	Tandem_Repeat	53337	54350	1152	+	.	.
scaffold1818	subtractBed	intrn	53337	54350	.	+	.	Parent=CGI_10003626;
	scaffold1818	TRF	Tandem_Repeat	53337	54350	1152	+	.	.
scaffold1819	subtractBed	intrn	141024	141412	.	+	.	Parent=CGI_10007295;
	scaffold1819	TRF	Tandem_Repeat	141024	141412	232	+	.	.
scaffold1819	subtractBed	intrn	141120	141238	.	+	.	Parent=CGI_10007295;
	scaffold1819	TRF	Tandem_Repeat	141120	141238	220	+	.	.
scaffold1820	subtractBed	intrn	10438	10632	.	+	.	Parent=CGI_10002445;
	scaffold1820	WUBlastX	DNA_IS4EU	10438	10632	21	-	.	.
scaffold1820	subtractBed	intrn	23944	23973	.	+	.	Parent=CGI_10002446;
	scaffold1820	TRF	Tandem_Repeat	23944	23973	60	+	.	.
scaffold1820	subtractBed	intrn	25505	25580	.	+	.	Parent=CGI_10002446;
	scaffold1820	TRF	Tandem_Repeat	25505	25580	66	+	.	.
scaffold1820	subtractBed	intrn	31020	31063	.	+	.	Parent=CGI_10002446;
	scaffold1820	TRF	Tandem_Repeat	31020	31063	70	+	.	.
scaffold1820	subtractBed	intrn	32969	33672	.	+	.	Parent=CGI_10002446;
	scaffold1820	TRF	Tandem_Repeat	32969	33672	537	+	.	.
scaffold1820	subtractBed	intrn	33331	33672	.	+	.	Parent=CGI_10002446;
	scaffold1820	TRF	Tandem_Repeat	33331	33672	548	+	.	.
scaffold1820	subtractBed	intrn	39172	39212	.	+	.	Parent=CGI_10002447;
	scaffold1820	TRF	Tandem_Repeat	39172	39212	73	+	.	.
scaffold1821	subtractBed	intrn	73653	73695	.	-	.	Parent=CGI_10011282;
	scaffold1821	TRF	Tandem_Repeat	73653	73695	86	+	.	.
scaffold1821	subtractBed	intrn	80660	80707	.	-	.	Parent=CGI_10011282;
	scaffold1821	TRF	Tandem_Repeat	80660	80707	69	+	.	.
scaffold1821	subtractBed	intrn	98927	98966	.	+	.	Parent=CGI_10011284;
	scaffold1821	TRF	Tandem_Repeat	98927	98966	80	+	.	.
scaffold1821	subtractBed	intrn	171908	172567	.	-	.	Parent=CGI_10011291;
	scaffold1821	WUBlastX	LINE_RTE-BovB	171908	172567	441	+	.	.
scaffold1821	subtractBed	intrn	171478	171843	.	-	.	Parent=CGI_10011291;
	scaffold1821	WUBlastX	LINE_L1	171478	171843	44	+	.	.
scaffold1821	subtractBed	intrn	171553	171906	.	-	.	Parent=CGI_10011291;
	scaffold1821	WUBlastX	LINE_RTE-X	171553	171906	107	+	.	.
scaffold1821	subtractBed	intrn	171559	171858	.	-	.	Parent=CGI_10011291;
	scaffold1821	WUBlastX	LINE_RTE-BovB	171559	171858	290	+	.	.
scaffold1821	subtractBed	intrn	181317	181363	.	-	.	Parent=CGI_10011292;
	scaffold1821	TRF	Tandem_Repeat	181317	181363	94	+	.	.
scaffold1821	subtractBed	intrn	183886	183994	.	-	.	Parent=CGI_10011292;
	scaffold1821	WUBlastX	LINE_L2	183886	184263	127	+	.	.
scaffold1821	subtractBed	intrn	191892	191950	.	+	.	Parent=CGI_10011293;
	scaffold1821	TRF	Tandem_Repeat	191892	191950	118	+	.	.
scaffold1821	subtractBed	intrn	205954	206005	.	+	.	Parent=CGI_10011294;
	scaffold1821	TRF	Tandem_Repeat	205954	206005	104	+	.	.
scaffold1821	subtractBed	intrn	211813	211870	.	+	.	Parent=CGI_10011295;
	scaffold1821	TRF	Tandem_Repeat	211813	211870	107	+	.	.
scaffold1821	subtractBed	intrn	212314	213058	.	+	.	Parent=CGI_10011295;
	scaffold1821	TRF	Tandem_Repeat	212314	213058	1088	+	.	.
scaffold1821	subtractBed	intrn	218102	218161	.	+	.	Parent=CGI_10011296;
	scaffold1821	TRF	Tandem_Repeat	218102	218161	120	+	.	.
scaffold1821	subtractBed	intrn	244371	244433	.	+	.	Parent=CGI_10011298;
	scaffold1821	TRF	Tandem_Repeat	244371	244433	117	+	.	.
scaffold1821	subtractBed	intrn	256363	256423	.	+	.	Parent=CGI_10011299;
	scaffold1821	TRF	Tandem_Repeat	256363	256423	122	+	.	.
scaffold1821	subtractBed	intrn	274993	275032	.	+	.	Parent=CGI_10011301;
	scaffold1821	TRF	Tandem_Repeat	274993	275032	80	+	.	.
scaffold1822	subtractBed	intrn	85391	85436	.	+	.	Parent=CGI_10012049;
	scaffold1822	TRF	Tandem_Repeat	85391	85436	92	+	.	.
scaffold1822	subtractBed	intrn	101284	101494	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	101284	101494	167	+	.	.
scaffold1822	subtractBed	intrn	101493	101663	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	101493	101663	216	+	.	.
scaffold1822	subtractBed	intrn	102187	102272	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	102187	102272	91	+	.	.
scaffold1822	subtractBed	intrn	102338	102513	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	102338	102513	144	+	.	.
scaffold1822	subtractBed	intrn	102338	102529	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	102338	102529	208	+	.	.
scaffold1822	subtractBed	intrn	102556	102698	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	102556	102698	151	+	.	.
scaffold1822	subtractBed	intrn	105784	105899	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	105784	105899	137	+	.	.
scaffold1822	subtractBed	intrn	106134	106166	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	106134	106166	66	+	.	.
scaffold1822	subtractBed	intrn	107151	107204	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	107151	107204	108	+	.	.
scaffold1822	subtractBed	intrn	107455	107570	.	-	.	Parent=CGI_10012050;
	scaffold1822	TRF	Tandem_Repeat	107455	107570	137	+	.	.
scaffold1822	subtractBed	intrn	121223	121261	.	+	.	Parent=CGI_10012053;
	scaffold1822	TRF	Tandem_Repeat	121223	121261	64	+	.	.
scaffold1822	subtractBed	intrn	125199	125224	.	+	.	Parent=CGI_10012053;
	scaffold1822	TRF	Tandem_Repeat	125199	125224	52	+	.	.
scaffold1822	subtractBed	intrn	163011	163041	.	+	.	Parent=CGI_10012056;
	scaffold1822	TRF	Tandem_Repeat	163011	163041	53	+	.	.
scaffold1822	subtractBed	intrn	188802	189260	.	+	.	Parent=CGI_10012060;
	scaffold1822	TRF	Tandem_Repeat	188802	189266	702	+	.	.
scaffold1822	subtractBed	intrn	189431	189613	.	+	.	Parent=CGI_10012060;
	scaffold1822	TRF	Tandem_Repeat	189423	189613	373	+	.	.
scaffold1822	subtractBed	intrn	188802	189260	.	-	.	Parent=CGI_10012061;
	scaffold1822	TRF	Tandem_Repeat	188802	189266	702	+	.	.
scaffold1822	subtractBed	intrn	189431	189613	.	-	.	Parent=CGI_10012061;
	scaffold1822	TRF	Tandem_Repeat	189423	189613	373	+	.	.
scaffold1822	subtractBed	intrn	205120	205197	.	+	.	Parent=CGI_10012062;
	scaffold1822	TRF	Tandem_Repeat	205120	205197	86	+	.	.
scaffold1822	subtractBed	intrn	205123	205189	.	+	.	Parent=CGI_10012062;
	scaffold1822	TRF	Tandem_Repeat	205123	205189	107	+	.	.
scaffold1822	subtractBed	intrn	205496	205661	.	+	.	Parent=CGI_10012062;
	scaffold1822	TRF	Tandem_Repeat	205496	205661	179	+	.	.
scaffold1822	subtractBed	intrn	205775	206326	.	+	.	Parent=CGI_10012062;
	scaffold1822	TRF	Tandem_Repeat	205775	206326	700	+	.	.
scaffold1822	subtractBed	intrn	244358	244408	.	+	.	Parent=CGI_10012064;
	scaffold1822	TRF	Tandem_Repeat	244358	244408	102	+	.	.
scaffold1822	subtractBed	intrn	247704	247737	.	+	.	Parent=CGI_10012064;
	scaffold1822	TRF	Tandem_Repeat	247704	247737	68	+	.	.
scaffold1822	subtractBed	intrn	268477	268534	.	+	.	Parent=CGI_10012065;
	scaffold1822	TRF	Tandem_Repeat	268477	268534	109	+	.	.
scaffold1822	subtractBed	intrn	280979	281808	.	-	.	Parent=CGI_10012066;
	scaffold1822	TRF	Tandem_Repeat	280979	281808	1104	+	.	.
scaffold1822	subtractBed	intrn	285492	285542	.	-	.	Parent=CGI_10012066;
	scaffold1822	TRF	Tandem_Repeat	285492	285542	68	+	.	.
scaffold1822	subtractBed	intrn	294142	294183	.	-	.	Parent=CGI_10012066;
	scaffold1822	TRF	Tandem_Repeat	294142	294183	57	+	.	.
scaffold1822	subtractBed	intrn	294389	294423	.	-	.	Parent=CGI_10012066;
	scaffold1822	TRF	Tandem_Repeat	294389	294423	54	+	.	.
scaffold1823	subtractBed	intrn	10971	14362	.	+	.	Parent=CGI_10005168;
	scaffold1823	TRF	Tandem_Repeat	10971	14362	4618	+	.	.
scaffold1823	subtractBed	intrn	15073	15811	.	+	.	Parent=CGI_10005168;
	scaffold1823	TRF	Tandem_Repeat	15073	15811	925	+	.	.
scaffold1823	subtractBed	intrn	19828	19884	.	+	.	Parent=CGI_10005168;
	scaffold1823	TRF	Tandem_Repeat	19828	19884	105	+	.	.
scaffold1823	subtractBed	intrn	19991	20036	.	+	.	Parent=CGI_10005168;
	scaffold1823	TRF	Tandem_Repeat	19991	20036	92	+	.	.
scaffold1823	subtractBed	intrn	17914	18816	.	+	.	Parent=CGI_10005168;
	scaffold1823	WUBlastX	LINE_L2	17914	18816	406	-	.	.
scaffold1823	subtractBed	intrn	15810	16719	.	+	.	Parent=CGI_10005168;
	scaffold1823	TRF	Tandem_Repeat	15810	16719	1345	+	.	.
scaffold1823	subtractBed	intrn	30328	30393	.	+	.	Parent=CGI_10005169;
	scaffold1823	TRF	Tandem_Repeat	30328	30393	107	+	.	.
scaffold1823	subtractBed	intrn	30331	30392	.	+	.	Parent=CGI_10005169;
	scaffold1823	TRF	Tandem_Repeat	30331	30392	63	+	.	.
scaffold1823	subtractBed	intrn	26459	27103	.	+	.	Parent=CGI_10005169;
	scaffold1823	WUBlastX	DNA_Kolobok-IS4	26459	27103	78	+	.	.
scaffold1825	subtractBed	intrn	62123	63082	.	-	.	Parent=CGI_10011138;
	scaffold1825	WUBlastX	LTR_Gypsy	62123	63082	237	-	.	.
scaffold1825	subtractBed	intrn	58733	62929	.	-	.	Parent=CGI_10011138;
	scaffold1825	WUBlastX	LTR_Gypsy	58733	62929	2299	-	.	.
scaffold1825	subtractBed	intrn	71007	71062	.	+	.	Parent=CGI_10011139;
	scaffold1825	TRF	Tandem_Repeat	71007	71062	103	+	.	.
scaffold1825	subtractBed	intrn	74033	74167	.	-	.	Parent=CGI_10011140;
	scaffold1825	TRF	Tandem_Repeat	74033	74167	137	+	.	.
scaffold1825	subtractBed	intrn	76650	76695	.	-	.	Parent=CGI_10011141;
	scaffold1825	TRF	Tandem_Repeat	76650	76695	92	+	.	.
scaffold1825	subtractBed	intrn	76695	76747	.	-	.	Parent=CGI_10011141;
	scaffold1825	TRF	Tandem_Repeat	76695	76747	106	+	.	.
scaffold1825	subtractBed	intrn	88104	88146	.	+	.	Parent=CGI_10011142;
	scaffold1825	TRF	Tandem_Repeat	88104	88146	86	+	.	.
scaffold1825	subtractBed	intrn	95889	96173	.	+	.	Parent=CGI_10011143;
	scaffold1825	TRF	Tandem_Repeat	95889	96173	455	+	.	.
scaffold1825	subtractBed	intrn	101399	101616	.	+	.	Parent=CGI_10011143;
	scaffold1825	TRF	Tandem_Repeat	101399	101616	373	+	.	.
scaffold1825	subtractBed	intrn	104381	104834	.	+	.	Parent=CGI_10011143;
	scaffold1825	TRF	Tandem_Repeat	104381	104834	836	+	.	.
scaffold1825	subtractBed	intrn	116715	116843	.	-	.	Parent=CGI_10011144;
	scaffold1825	TRF	Tandem_Repeat	116715	116843	114	+	.	.
scaffold1825	subtractBed	intrn	146718	146763	.	+	.	Parent=CGI_10011146;
	scaffold1825	TRF	Tandem_Repeat	146718	146763	56	+	.	.
scaffold1825	subtractBed	intrn	157086	158005	.	+	.	Parent=CGI_10011146;
	scaffold1825	TRF	Tandem_Repeat	157086	158005	1324	+	.	.
scaffold1825	subtractBed	intrn	159785	159835	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_CR1-L2	159785	159835	36	+	.	.
scaffold1825	subtractBed	intrn	158483	159073	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_L1	158483	159073	59	+	.	.
scaffold1825	subtractBed	intrn	159961	160122	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_L2	159961	160122	117	+	.	.
scaffold1825	subtractBed	intrn	160256	160714	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_L2	160256	160714	123	+	.	.
scaffold1825	subtractBed	intrn	158585	159199	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_L2	158585	159199	173	+	.	.
scaffold1825	subtractBed	intrn	159910	160122	.	+	.	Parent=CGI_10011146;
	scaffold1825	WUBlastX	LINE_L2	159910	160122	76	+	.	.
scaffold1825	subtractBed	intrn	166802	167023	.	-	.	Parent=CGI_10011147;
	scaffold1825	WUBlastX	LINE_L2	166802	167023	51	-	.	.
scaffold1825	subtractBed	intrn	166811	167113	.	-	.	Parent=CGI_10011147;
	scaffold1825	WUBlastX	LINE_CR1-L2	166811	167113	43	-	.	.
scaffold1825	subtractBed	intrn	171459	172244	.	-	.	Parent=CGI_10011147;
	scaffold1825	TRF	Tandem_Repeat	171459	172244	808	+	.	.
scaffold1825	subtractBed	intrn	175366	175409	.	-	.	Parent=CGI_10011147;
	scaffold1825	TRF	Tandem_Repeat	175366	175409	88	+	.	.
scaffold1825	subtractBed	intrn	175410	175439	.	-	.	Parent=CGI_10011147;
	scaffold1825	TRF	Tandem_Repeat	175410	175439	60	+	.	.
scaffold1825	subtractBed	intrn	191428	191746	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	191428	191746	355	+	.	.
scaffold1825	subtractBed	intrn	191431	191746	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	191431	191746	292	+	.	.
scaffold1825	subtractBed	intrn	192094	192250	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	192094	192250	269	+	.	.
scaffold1825	subtractBed	intrn	192094	192921	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	192094	192921	331	+	.	.
scaffold1825	subtractBed	intrn	192094	192921	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	192094	192921	370	+	.	.
scaffold1825	subtractBed	intrn	192440	192581	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	192440	192581	92	+	.	.
scaffold1825	subtractBed	intrn	192498	192909	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	192498	192909	206	+	.	.
scaffold1825	subtractBed	intrn	194424	194597	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	194424	194597	107	+	.	.
scaffold1825	subtractBed	intrn	194513	195130	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	194513	195130	784	+	.	.
scaffold1825	subtractBed	intrn	195150	195220	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	195150	195220	88	+	.	.
scaffold1825	subtractBed	intrn	195302	195393	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	195302	195393	69	+	.	.
scaffold1825	subtractBed	intrn	195037	195413	.	+	.	Parent=CGI_10011149;
	scaffold1825	TRF	Tandem_Repeat	195037	195413	240	+	.	.
scaffold1826	subtractBed	intrn	40951	41145	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy-Cigr	40951	41145	91	+	.	.
scaffold1826	subtractBed	intrn	41151	41345	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	41151	41345	102	+	.	.
scaffold1826	subtractBed	intrn	40152	40280	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	40152	40280	29	+	.	.
scaffold1826	subtractBed	intrn	39953	40141	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	39953	40141	44	+	.	.
scaffold1826	subtractBed	intrn	40984	41181	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	40984	41181	107	+	.	.
scaffold1826	subtractBed	intrn	47881	48165	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	DNA_Harbinger	47881	48165	164	-	.	.
scaffold1826	subtractBed	intrn	40861	41163	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	40861	41163	72	+	.	.
scaffold1826	subtractBed	intrn	40984	41142	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	40984	41142	113	+	.	.
scaffold1826	subtractBed	intrn	41160	41411	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	41160	41411	60	+	.	.
scaffold1826	subtractBed	intrn	40912	41145	.	+	.	Parent=CGI_10006241;
	scaffold1826	WUBlastX	LTR_Gypsy	40912	41145	82	+	.	.
scaffold1826	subtractBed	intrn	98153	98206	.	+	.	Parent=CGI_10006242;
	scaffold1826	TRF	Tandem_Repeat	98153	98206	74	+	.	.
scaffold1826	subtractBed	intrn	99613	100530	.	+	.	Parent=CGI_10006242;
	scaffold1826	TRF	Tandem_Repeat	99613	100530	1339	+	.	.
scaffold1826	subtractBed	intrn	130465	130508	.	+	.	Parent=CGI_10006243;
	scaffold1826	TRF	Tandem_Repeat	130465	130508	52	+	.	.
scaffold1826	subtractBed	intrn	145184	145208	.	+	.	Parent=CGI_10006244;
	scaffold1826	TRF	Tandem_Repeat	145184	145208	50	+	.	.
scaffold1827	subtractBed	intrn	110545	110580	.	+	.	Parent=CGI_10013799;
	scaffold1827	TRF	Tandem_Repeat	110545	110580	72	+	.	.
scaffold1827	subtractBed	intrn	123462	123506	.	+	.	Parent=CGI_10013800;
	scaffold1827	TRF	Tandem_Repeat	123462	123506	90	+	.	.
scaffold1827	subtractBed	intrn	129740	129822	.	+	.	Parent=CGI_10013800;
	scaffold1827	TRF	Tandem_Repeat	129740	129822	150	+	.	.
scaffold1827	subtractBed	intrn	129820	129847	.	+	.	Parent=CGI_10013800;
	scaffold1827	TRF	Tandem_Repeat	129820	129847	56	+	.	.
scaffold1827	subtractBed	intrn	130092	130118	.	+	.	Parent=CGI_10013800;
	scaffold1827	TRF	Tandem_Repeat	130092	130118	54	+	.	.
scaffold1827	subtractBed	intrn	200320	200983	.	-	.	Parent=CGI_10013803;
	scaffold1827	TRF	Tandem_Repeat	200320	200983	694	+	.	.
scaffold1827	subtractBed	intrn	200973	201276	.	-	.	Parent=CGI_10013803;
	scaffold1827	TRF	Tandem_Repeat	200973	201276	139	+	.	.
scaffold1827	subtractBed	intrn	202858	203293	.	-	.	Parent=CGI_10013803;
	scaffold1827	TRF	Tandem_Repeat	202858	203293	436	+	.	.
scaffold1827	subtractBed	intrn	272470	272655	.	-	.	Parent=CGI_10013805;
	scaffold1827	TRF	Tandem_Repeat	272470	272655	302	+	.	.
scaffold1827	subtractBed	intrn	281111	281380	.	-	.	Parent=CGI_10013805;
	scaffold1827	TRF	Tandem_Repeat	281111	281380	348	+	.	.
scaffold1827	subtractBed	intrn	295901	296244	.	-	.	Parent=CGI_10013807;
	scaffold1827	TRF	Tandem_Repeat	295901	296244	419	+	.	.
scaffold1827	subtractBed	intrn	301033	302966	.	+	.	Parent=CGI_10013808;
	scaffold1827	TRF	Tandem_Repeat	301033	302966	2562	+	.	.
scaffold1827	subtractBed	intrn	323067	323093	.	-	.	Parent=CGI_10013809;
	scaffold1827	TRF	Tandem_Repeat	323067	323093	54	+	.	.
scaffold1827	subtractBed	intrn	330123	330176	.	-	.	Parent=CGI_10013809;
	scaffold1827	TRF	Tandem_Repeat	330123	330176	99	+	.	.
scaffold1827	subtractBed	intrn	331735	331812	.	-	.	Parent=CGI_10013809;
	scaffold1827	TRF	Tandem_Repeat	331735	331812	147	+	.	.
scaffold1827	subtractBed	intrn	340967	341177	.	-	.	Parent=CGI_10013809;
	scaffold1827	WUBlastX	LTR_Copia	340967	341509	27	-	.	.
scaffold1827	subtractBed	intrn	341500	341509	.	-	.	Parent=CGI_10013809;
	scaffold1827	WUBlastX	LTR_Copia	340967	341509	27	-	.	.
scaffold1827	subtractBed	intrn	345269	345902	.	-	.	Parent=CGI_10013809;
	scaffold1827	TRF	Tandem_Repeat	345269	345902	1079	+	.	.
scaffold1827	subtractBed	intrn	348737	349001	.	-	.	Parent=CGI_10013809;
	scaffold1827	TRF	Tandem_Repeat	348737	349001	206	+	.	.
scaffold1828	subtractBed	intrn	60957	61098	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	60957	61098	131	+	.	.
scaffold1828	subtractBed	intrn	67080	67150	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	67080	67150	142	+	.	.
scaffold1828	subtractBed	intrn	69172	69235	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	69172	69235	96	+	.	.
scaffold1828	subtractBed	intrn	69785	69840	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	69785	69840	112	+	.	.
scaffold1828	subtractBed	intrn	74608	74806	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	74608	74806	366	+	.	.
scaffold1828	subtractBed	intrn	75063	75113	.	+	.	Parent=CGI_10007019;
	scaffold1828	TRF	Tandem_Repeat	75063	75113	75	+	.	.
scaffold1828	subtractBed	intrn	107083	107134	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	107083	107134	77	+	.	.
scaffold1828	subtractBed	intrn	116043	116101	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	116043	116101	109	+	.	.
scaffold1828	subtractBed	intrn	119894	119943	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	119894	119943	100	+	.	.
scaffold1828	subtractBed	intrn	123466	123509	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	123466	123509	88	+	.	.
scaffold1828	subtractBed	intrn	123532	123581	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	123532	123581	100	+	.	.
scaffold1828	subtractBed	intrn	130466	130536	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	130466	130536	69	+	.	.
scaffold1828	subtractBed	intrn	135163	135213	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	135163	135213	84	+	.	.
scaffold1828	subtractBed	intrn	137520	137572	.	-	.	Parent=CGI_10007021;
	scaffold1828	TRF	Tandem_Repeat	137520	137572	97	+	.	.
scaffold1830	subtractBed	intrn	34188	34222	.	+	.	Parent=CGI_10002541;
	scaffold1830	TRF	Tandem_Repeat	34188	34222	70	+	.	.
scaffold1830	subtractBed	intrn	37060	37090	.	+	.	Parent=CGI_10002541;
	scaffold1830	TRF	Tandem_Repeat	37060	37090	62	+	.	.
scaffold1831	subtractBed	intrn	4830	4991	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	4830	4991	306	+	.	.
scaffold1831	subtractBed	intrn	4991	5033	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	4991	5033	50	+	.	.
scaffold1831	subtractBed	intrn	2702	2998	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LTR_Gypsy	2702	2998	249	-	.	.
scaffold1831	subtractBed	intrn	1132	1374	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1132	1374	135	-	.	.
scaffold1831	subtractBed	intrn	1383	1502	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1383	1502	75	-	.	.
scaffold1831	subtractBed	intrn	1806	1886	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1806	1886	42	-	.	.
scaffold1831	subtractBed	intrn	2588	3004	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LTR_Gypsy	2588	3004	137	-	.	.
scaffold1831	subtractBed	intrn	1806	1916	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1806	1916	32	-	.	.
scaffold1831	subtractBed	intrn	1455	1676	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1455	1676	25	-	.	.
scaffold1831	subtractBed	intrn	1153	1416	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1153	1416	86	-	.	.
scaffold1831	subtractBed	intrn	1413	1616	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	1413	1616	58	-	.	.
scaffold1831	subtractBed	intrn	13375	14225	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	13375	14225	817	+	.	.
scaffold1831	subtractBed	intrn	13383	14155	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	13383	14155	966	+	.	.
scaffold1831	subtractBed	intrn	18260	18293	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	18260	18293	59	+	.	.
scaffold1831	subtractBed	intrn	22660	22700	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	22660	22700	82	+	.	.
scaffold1831	subtractBed	intrn	29392	29426	.	+	.	Parent=CGI_10002912;
	scaffold1831	TRF	Tandem_Repeat	29392	29426	70	+	.	.
scaffold1831	subtractBed	intrn	26037	26147	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1	26037	26147	20	-	.	.
scaffold1831	subtractBed	intrn	25619	25807	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L2	25619	25807	38	-	.	.
scaffold1831	subtractBed	intrn	26579	26812	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1-Tx1	26579	26812	40	-	.	.
scaffold1831	subtractBed	intrn	25595	25768	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	25595	25768	65	-	.	.
scaffold1831	subtractBed	intrn	24109	24990	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	24109	24990	150	-	.	.
scaffold1831	subtractBed	intrn	26456	26773	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	26456	26773	82	-	.	.
scaffold1831	subtractBed	intrn	26435	26674	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	26435	26674	136	-	.	.
scaffold1831	subtractBed	intrn	26579	26896	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1	26579	26896	25	-	.	.
scaffold1831	subtractBed	intrn	25595	25741	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	25595	25741	70	-	.	.
scaffold1831	subtractBed	intrn	23335	24765	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	23335	24765	944	-	.	.
scaffold1831	subtractBed	intrn	26318	26701	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_CR1-L2	26318	26701	28	-	.	.
scaffold1831	subtractBed	intrn	25619	25846	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L2	25619	25846	23	-	.	.
scaffold1831	subtractBed	intrn	25511	25729	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	25511	25729	23	-	.	.
scaffold1831	subtractBed	intrn	26447	26725	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_I	26447	26725	103	-	.	.
scaffold1831	subtractBed	intrn	25147	25302	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	DNA_Harbinger	25147	25302	68	+	.	.
scaffold1831	subtractBed	intrn	30629	31324	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	30584	31324	253	-	.	.
scaffold1831	subtractBed	intrn	31353	31667	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	31353	31667	161	-	.	.
scaffold1831	subtractBed	intrn	30629	30704	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	30387	30704	97	-	.	.
scaffold1831	subtractBed	intrn	31785	31892	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-X	31785	31892	91	-	.	.
scaffold1831	subtractBed	intrn	33444	33857	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_I	33444	33857	53	+	.	.
scaffold1831	subtractBed	intrn	34302	34775	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34302	34775	199	+	.	.
scaffold1831	subtractBed	intrn	32940	33647	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1-Tx1	32940	33647	209	+	.	.
scaffold1831	subtractBed	intrn	34026	34754	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_RTE-BovB	34026	34754	88	+	.	.
scaffold1831	subtractBed	intrn	33543	34238	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_I-Nimb	33543	34238	52	+	.	.
scaffold1831	subtractBed	intrn	34880	34916	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34880	35122	37	+	.	.
scaffold1831	subtractBed	intrn	34296	34895	.	+	.	Parent=CGI_10002912;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34296	34895	160	+	.	.
scaffold1831	subtractBed	intrn	30629	31324	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_RTE-X	30584	31324	253	-	.	.
scaffold1831	subtractBed	intrn	31353	31667	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_RTE-X	31353	31667	161	-	.	.
scaffold1831	subtractBed	intrn	30629	30704	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_RTE-X	30387	30704	97	-	.	.
scaffold1831	subtractBed	intrn	31785	31892	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_RTE-X	31785	31892	91	-	.	.
scaffold1831	subtractBed	intrn	33444	33857	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_I	33444	33857	53	+	.	.
scaffold1831	subtractBed	intrn	34302	34775	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34302	34775	199	+	.	.
scaffold1831	subtractBed	intrn	32940	33647	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	32940	33647	209	+	.	.
scaffold1831	subtractBed	intrn	34026	34754	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_RTE-BovB	34026	34754	88	+	.	.
scaffold1831	subtractBed	intrn	33543	34238	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_I-Nimb	33543	34238	52	+	.	.
scaffold1831	subtractBed	intrn	34880	34916	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34880	35122	37	+	.	.
scaffold1831	subtractBed	intrn	34296	34895	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34296	34895	160	+	.	.
scaffold1831	subtractBed	intrn	34985	37786	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34985	37786	952	+	.	.
scaffold1831	subtractBed	intrn	34938	35122	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_L1-Tx1	34880	35122	37	+	.	.
scaffold1831	subtractBed	intrn	37682	37810	.	-	.	Parent=CGI_10002913;
	scaffold1831	WUBlastX	LINE_I	37682	37810	29	+	.	.
scaffold1832	subtractBed	intrn	9241	9914	.	+	.	Parent=CGI_10018464;
	scaffold1832	TRF	Tandem_Repeat	9241	9914	1014	+	.	.
scaffold1832	subtractBed	intrn	13119	13152	.	+	.	Parent=CGI_10018464;
	scaffold1832	TRF	Tandem_Repeat	13119	13152	52	+	.	.
scaffold1832	subtractBed	intrn	27374	27518	.	+	.	Parent=CGI_10018464;
	scaffold1832	TRF	Tandem_Repeat	27341	27518	297	+	.	.
scaffold1832	subtractBed	intrn	37804	37842	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	37804	37842	78	+	.	.
scaffold1832	subtractBed	intrn	38748	39411	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	38748	39411	333	+	.	.
scaffold1832	subtractBed	intrn	40877	40973	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	40877	40973	63	+	.	.
scaffold1832	subtractBed	intrn	40877	40973	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	40877	40973	90	+	.	.
scaffold1832	subtractBed	intrn	44404	44641	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	44404	44641	221	+	.	.
scaffold1832	subtractBed	intrn	49596	49636	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	49596	49636	55	+	.	.
scaffold1832	subtractBed	intrn	61161	61949	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	61161	61949	965	+	.	.
scaffold1832	subtractBed	intrn	62102	62132	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	62102	62132	53	+	.	.
scaffold1832	subtractBed	intrn	62908	62975	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	62908	62975	70	+	.	.
scaffold1832	subtractBed	intrn	62908	62975	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	62908	62975	63	+	.	.
scaffold1832	subtractBed	intrn	65890	66912	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	65890	66912	791	+	.	.
scaffold1832	subtractBed	intrn	73259	73327	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	73259	73327	84	+	.	.
scaffold1832	subtractBed	intrn	73256	73325	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	73256	73325	131	+	.	.
scaffold1832	subtractBed	intrn	75133	75172	.	-	.	Parent=CGI_10018465;
	scaffold1832	TRF	Tandem_Repeat	75133	75172	80	+	.	.
scaffold1832	subtractBed	intrn	158678	158839	.	+	.	Parent=CGI_10018467;
	scaffold1832	WUBlastX	DNA_Sola	158678	158839	58	-	.	.
scaffold1832	subtractBed	intrn	198448	198536	.	-	.	Parent=CGI_10018468;
	scaffold1832	WUBlastX	DNA_En-Spm	198195	198536	46	-	.	.
scaffold1832	subtractBed	intrn	198577	198837	.	-	.	Parent=CGI_10018468;
	scaffold1832	WUBlastX	DNA_En-Spm	198577	198837	53	-	.	.
scaffold1832	subtractBed	intrn	209116	209256	.	-	.	Parent=CGI_10018469;
	scaffold1832	WUBlastX	DNA_Maverick	209116	209256	79	-	.	.
scaffold1832	subtractBed	intrn	209116	209334	.	-	.	Parent=CGI_10018469;
	scaffold1832	WUBlastX	DNA_Maverick	209116	209334	66	-	.	.
scaffold1832	subtractBed	intrn	209107	209364	.	-	.	Parent=CGI_10018469;
	scaffold1832	WUBlastX	DNA_Maverick	209107	209364	54	-	.	.
scaffold1832	subtractBed	intrn	269641	270344	.	-	.	Parent=CGI_10018473;
	scaffold1832	TRF	Tandem_Repeat	269641	270344	897	+	.	.
scaffold1832	subtractBed	intrn	274869	274913	.	-	.	Parent=CGI_10018473;
	scaffold1832	TRF	Tandem_Repeat	274869	274913	72	+	.	.
scaffold1832	subtractBed	intrn	277449	277498	.	-	.	Parent=CGI_10018473;
	scaffold1832	TRF	Tandem_Repeat	277449	277498	100	+	.	.
scaffold1832	subtractBed	intrn	278757	278802	.	-	.	Parent=CGI_10018473;
	scaffold1832	TRF	Tandem_Repeat	278757	278802	56	+	.	.
scaffold1832	subtractBed	intrn	298246	298270	.	+	.	Parent=CGI_10018474;
	scaffold1832	TRF	Tandem_Repeat	298246	298270	50	+	.	.
scaffold1832	subtractBed	intrn	330457	330491	.	+	.	Parent=CGI_10018478;
	scaffold1832	TRF	Tandem_Repeat	330457	330491	70	+	.	.
scaffold1832	subtractBed	intrn	329912	330151	.	+	.	Parent=CGI_10018478;
	scaffold1832	WUBlastX	LINE_L2	329912	330151	48	+	.	.
scaffold1832	subtractBed	intrn	333352	333409	.	+	.	Parent=CGI_10018478;
	scaffold1832	TRF	Tandem_Repeat	333352	333409	80	+	.	.
scaffold1832	subtractBed	intrn	450554	451215	.	+	.	Parent=CGI_10018484;
	scaffold1832	TRF	Tandem_Repeat	450554	451215	788	+	.	.
scaffold1832	subtractBed	intrn	450554	451215	.	+	.	Parent=CGI_10018484;
	scaffold1832	TRF	Tandem_Repeat	450554	451215	932	+	.	.
scaffold1832	subtractBed	intrn	467493	467518	.	+	.	Parent=CGI_10018486;
	scaffold1832	TRF	Tandem_Repeat	467493	467518	52	+	.	.
scaffold1832	subtractBed	intrn	477421	477630	.	-	.	Parent=CGI_10018487;
	scaffold1832	TRF	Tandem_Repeat	477421	477648	343	+	.	.
scaffold1832	subtractBed	intrn	483392	483435	.	+	.	Parent=CGI_10018488;
	scaffold1832	TRF	Tandem_Repeat	483392	483435	88	+	.	.
scaffold1832	subtractBed	intrn	483451	483583	.	+	.	Parent=CGI_10018488;
	scaffold1832	TRF	Tandem_Repeat	483451	483583	162	+	.	.
scaffold1832	subtractBed	intrn	484320	484372	.	+	.	Parent=CGI_10018488;
	scaffold1832	TRF	Tandem_Repeat	484320	484372	106	+	.	.
scaffold1832	subtractBed	intrn	507586	507641	.	-	.	Parent=CGI_10018491;
	scaffold1832	TRF	Tandem_Repeat	507586	507641	112	+	.	.
scaffold1832	subtractBed	intrn	509283	509372	.	-	.	Parent=CGI_10018491;
	scaffold1832	TRF	Tandem_Repeat	509283	509372	162	+	.	.
scaffold1833	subtractBed	intrn	20582	20648	.	-	.	Parent=CGI_10007298;
	scaffold1833	TRF	Tandem_Repeat	20582	20648	70	+	.	.
scaffold1833	subtractBed	intrn	24294	24350	.	-	.	Parent=CGI_10007298;
	scaffold1833	TRF	Tandem_Repeat	24294	24350	114	+	.	.
scaffold1833	subtractBed	intrn	27343	27493	.	-	.	Parent=CGI_10007298;
	scaffold1833	TRF	Tandem_Repeat	27343	27493	125	+	.	.
scaffold1833	subtractBed	intrn	43874	43936	.	+	.	Parent=CGI_10007299;
	scaffold1833	TRF	Tandem_Repeat	43874	43936	126	+	.	.
scaffold1833	subtractBed	intrn	56015	56165	.	+	.	Parent=CGI_10007300;
	scaffold1833	TRF	Tandem_Repeat	56015	56165	100	+	.	.
scaffold1833	subtractBed	intrn	57544	57612	.	+	.	Parent=CGI_10007300;
	scaffold1833	TRF	Tandem_Repeat	57544	57612	138	+	.	.
scaffold1833	subtractBed	intrn	57902	58120	.	+	.	Parent=CGI_10007300;
	scaffold1833	WUBlastX	LINE_L1	57902	58120	42	-	.	.
scaffold1833	subtractBed	intrn	60844	61527	.	+	.	Parent=CGI_10007300;
	scaffold1833	WUBlastX	RC_Helitron	60844	61527	36	+	.	.
scaffold1833	subtractBed	intrn	61726	63102	.	+	.	Parent=CGI_10007300;
	scaffold1833	WUBlastX	RC_Helitron	61726	63102	363	+	.	.
scaffold1833	subtractBed	intrn	60976	63237	.	+	.	Parent=CGI_10007300;
	scaffold1833	WUBlastX	RC_Helitron	60976	63237	349	+	.	.
scaffold1833	subtractBed	intrn	62251	68409	.	+	.	Parent=CGI_10007300;
	scaffold1833	WUBlastX	RC_Helitron	62251	68409	3041	+	.	.
scaffold1833	subtractBed	intrn	132895	132944	.	-	.	Parent=CGI_10007301;
	scaffold1833	TRF	Tandem_Repeat	132895	132944	75	+	.	.
scaffold1833	subtractBed	intrn	143389	143422	.	-	.	Parent=CGI_10007301;
	scaffold1833	TRF	Tandem_Repeat	143389	143422	50	+	.	.
scaffold1833	subtractBed	intrn	150498	150558	.	-	.	Parent=CGI_10007301;
	scaffold1833	TRF	Tandem_Repeat	150498	150558	115	+	.	.
scaffold1833	subtractBed	intrn	157573	157678	.	-	.	Parent=CGI_10007301;
	scaffold1833	TRF	Tandem_Repeat	157573	157678	133	+	.	.
scaffold1834	subtractBed	intrn	42165	42383	.	+	.	Parent=CGI_10016651;
	scaffold1834	WUBlastX	LINE_L1	42165	42383	61	+	.	.
scaffold1834	subtractBed	intrn	42120	42260	.	+	.	Parent=CGI_10016651;
	scaffold1834	WUBlastX	LINE_L1-Tx1	42120	42260	77	+	.	.
scaffold1834	subtractBed	intrn	42704	42802	.	+	.	Parent=CGI_10016651;
	scaffold1834	WUBlastX	LINE_L1-Tx1	42704	42802	24	+	.	.
scaffold1834	subtractBed	intrn	59063	60803	.	+	.	Parent=CGI_10016651;
	scaffold1834	TRF	Tandem_Repeat	59063	60803	1921	+	.	.
scaffold1834	subtractBed	intrn	62849	63579	.	+	.	Parent=CGI_10016651;
	scaffold1834	TRF	Tandem_Repeat	62849	63579	782	+	.	.
scaffold1834	subtractBed	intrn	62874	63580	.	+	.	Parent=CGI_10016651;
	scaffold1834	TRF	Tandem_Repeat	62874	63580	958	+	.	.
scaffold1834	subtractBed	intrn	62874	63580	.	+	.	Parent=CGI_10016651;
	scaffold1834	TRF	Tandem_Repeat	62874	63580	961	+	.	.
scaffold1834	subtractBed	intrn	137888	137930	.	+	.	Parent=CGI_10016656;
	scaffold1834	TRF	Tandem_Repeat	137888	137930	86	+	.	.
scaffold1834	subtractBed	intrn	186660	186691	.	-	.	Parent=CGI_10016657;
	scaffold1834	TRF	Tandem_Repeat	186660	186691	64	+	.	.
scaffold1834	subtractBed	intrn	190784	191104	.	+	.	Parent=CGI_10016658;
	scaffold1834	WUBlastX	DNA_MuDR	190784	191104	45	+	.	.
scaffold1834	subtractBed	intrn	190370	191512	.	+	.	Parent=CGI_10016658;
	scaffold1834	WUBlastX	DNA_MuDR	190370	191512	30	+	.	.
scaffold1834	subtractBed	intrn	224542	224582	.	+	.	Parent=CGI_10016660;
	scaffold1834	TRF	Tandem_Repeat	224542	224582	82	+	.	.
scaffold1834	subtractBed	intrn	311020	311134	.	+	.	Parent=CGI_10016667;
	scaffold1834	TRF	Tandem_Repeat	311020	311134	135	+	.	.
scaffold1834	subtractBed	intrn	311948	312110	.	+	.	Parent=CGI_10016667;
	scaffold1834	TRF	Tandem_Repeat	311948	312110	150	+	.	.
scaffold1834	subtractBed	intrn	316041	316093	.	+	.	Parent=CGI_10016668;
	scaffold1834	TRF	Tandem_Repeat	316041	316093	106	+	.	.
scaffold1834	subtractBed	intrn	328685	328734	.	-	.	Parent=CGI_10016670;
	scaffold1834	TRF	Tandem_Repeat	328685	328734	100	+	.	.
scaffold1834	subtractBed	intrn	338970	339007	.	+	.	Parent=CGI_10016672;
	scaffold1834	TRF	Tandem_Repeat	338970	339007	67	+	.	.
scaffold1834	subtractBed	intrn	345797	345835	.	+	.	Parent=CGI_10016672;
	scaffold1834	TRF	Tandem_Repeat	345797	345835	62	+	.	.
scaffold1835	subtractBed	intrn	12075	12113	.	+	.	Parent=CGI_10015176;
	scaffold1835	TRF	Tandem_Repeat	12075	12113	78	+	.	.
scaffold1835	subtractBed	intrn	16825	17225	.	-	.	Parent=CGI_10015177;
	scaffold1835	TRF	Tandem_Repeat	16825	17225	457	+	.	.
scaffold1835	subtractBed	intrn	19617	19689	.	-	.	Parent=CGI_10015177;
	scaffold1835	TRF	Tandem_Repeat	19617	19689	137	+	.	.
scaffold1835	subtractBed	intrn	68929	68984	.	-	.	Parent=CGI_10015180;
	scaffold1835	TRF	Tandem_Repeat	68929	68984	112	+	.	.
scaffold1835	subtractBed	intrn	73146	73265	.	-	.	Parent=CGI_10015180;
	scaffold1835	TRF	Tandem_Repeat	73146	73265	195	+	.	.
scaffold1835	subtractBed	intrn	80445	80507	.	-	.	Parent=CGI_10015180;
	scaffold1835	TRF	Tandem_Repeat	80445	80507	126	+	.	.
scaffold1835	subtractBed	intrn	86550	86609	.	+	.	Parent=CGI_10015181;
	scaffold1835	TRF	Tandem_Repeat	86550	86609	120	+	.	.
scaffold1835	subtractBed	intrn	90544	90587	.	+	.	Parent=CGI_10015181;
	scaffold1835	TRF	Tandem_Repeat	90544	90587	88	+	.	.
scaffold1835	subtractBed	intrn	117201	117248	.	+	.	Parent=CGI_10015182;
	scaffold1835	TRF	Tandem_Repeat	117201	117248	69	+	.	.
scaffold1835	subtractBed	intrn	131878	132304	.	+	.	Parent=CGI_10015183;
	scaffold1835	TRF	Tandem_Repeat	131878	132304	423	+	.	.
scaffold1835	subtractBed	intrn	131878	132159	.	+	.	Parent=CGI_10015183;
	scaffold1835	TRF	Tandem_Repeat	131878	132159	422	+	.	.
scaffold1835	subtractBed	intrn	153811	154141	.	-	.	Parent=CGI_10015184;
	scaffold1835	TRF	Tandem_Repeat	153811	154141	662	+	.	.
scaffold1835	subtractBed	intrn	168015	168075	.	+	.	Parent=CGI_10015185;
	scaffold1835	TRF	Tandem_Repeat	168015	168075	113	+	.	.
scaffold1835	subtractBed	intrn	169459	169503	.	+	.	Parent=CGI_10015185;
	scaffold1835	TRF	Tandem_Repeat	169459	169503	81	+	.	.
scaffold1835	subtractBed	intrn	264961	265309	.	+	.	Parent=CGI_10015188;
	scaffold1835	TRF	Tandem_Repeat	264961	265309	332	+	.	.
scaffold1835	subtractBed	intrn	264961	265309	.	+	.	Parent=CGI_10015188;
	scaffold1835	TRF	Tandem_Repeat	264961	265309	334	+	.	.
scaffold1835	subtractBed	intrn	270478	270521	.	-	.	Parent=CGI_10015189;
	scaffold1835	TRF	Tandem_Repeat	270478	270521	52	+	.	.
scaffold1835	subtractBed	intrn	302949	302995	.	-	.	Parent=CGI_10015191;
	scaffold1835	TRF	Tandem_Repeat	302949	302995	94	+	.	.
scaffold1835	subtractBed	intrn	379070	379402	.	-	.	Parent=CGI_10015194;
	scaffold1835	WUBlastX	DNA_hAT-Blackja	379070	379402	90	-	.	.
scaffold1835	subtractBed	intrn	379363	379521	.	-	.	Parent=CGI_10015194;
	scaffold1835	WUBlastX	DNA_hAT-Blackja	379363	379521	41	-	.	.
scaffold1836	subtractBed	intrn	103454	103508	.	-	.	Parent=CGI_10026267;
	scaffold1836	TRF	Tandem_Repeat	103454	103508	110	+	.	.
scaffold1836	subtractBed	intrn	103634	103700	.	-	.	Parent=CGI_10026267;
	scaffold1836	TRF	Tandem_Repeat	103634	103700	98	+	.	.
scaffold1836	subtractBed	intrn	126619	127179	.	+	.	Parent=CGI_10026268;
	scaffold1836	WUBlastX	LINE_CR1	126619	127179	198	+	.	.
scaffold1836	subtractBed	intrn	228084	228240	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	228084	228240	242	+	.	.
scaffold1836	subtractBed	intrn	231249	231440	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231249	231440	139	+	.	.
scaffold1836	subtractBed	intrn	231249	231439	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231249	231439	177	+	.	.
scaffold1836	subtractBed	intrn	231249	231343	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231249	231343	64	+	.	.
scaffold1836	subtractBed	intrn	231740	231985	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231740	231985	87	+	.	.
scaffold1836	subtractBed	intrn	231776	232166	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231776	232166	197	+	.	.
scaffold1836	subtractBed	intrn	231776	231983	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	231776	231983	181	+	.	.
scaffold1836	subtractBed	intrn	232044	232181	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	232044	232181	161	+	.	.
scaffold1836	subtractBed	intrn	232044	232225	.	+	.	Parent=CGI_10026271;
	scaffold1836	TRF	Tandem_Repeat	232044	232225	143	+	.	.
scaffold1836	subtractBed	intrn	271016	271058	.	-	.	Parent=CGI_10026275;
	scaffold1836	TRF	Tandem_Repeat	271016	271058	86	+	.	.
scaffold1836	subtractBed	intrn	273065	273115	.	-	.	Parent=CGI_10026275;
	scaffold1836	TRF	Tandem_Repeat	273065	273115	102	+	.	.
scaffold1836	subtractBed	intrn	282082	282127	.	-	.	Parent=CGI_10026277;
	scaffold1836	TRF	Tandem_Repeat	282082	282127	85	+	.	.
scaffold1836	subtractBed	intrn	294783	295907	.	-	.	Parent=CGI_10026277;
	scaffold1836	TRF	Tandem_Repeat	294783	295907	1709	+	.	.
scaffold1836	subtractBed	intrn	282082	282127	.	+	.	Parent=CGI_10026278;
	scaffold1836	TRF	Tandem_Repeat	282082	282127	85	+	.	.
scaffold1836	subtractBed	intrn	294783	295907	.	+	.	Parent=CGI_10026279;
	scaffold1836	TRF	Tandem_Repeat	294783	295907	1709	+	.	.
scaffold1836	subtractBed	intrn	325958	326028	.	+	.	Parent=CGI_10026281;
	scaffold1836	TRF	Tandem_Repeat	325958	326028	76	+	.	.
scaffold1836	subtractBed	intrn	325960	326027	.	+	.	Parent=CGI_10026281;
	scaffold1836	TRF	Tandem_Repeat	325960	326027	65	+	.	.
scaffold1836	subtractBed	intrn	344484	344509	.	+	.	Parent=CGI_10026281;
	scaffold1836	TRF	Tandem_Repeat	344484	344509	52	+	.	.
scaffold1836	subtractBed	intrn	345104	345175	.	+	.	Parent=CGI_10026281;
	scaffold1836	TRF	Tandem_Repeat	345104	345175	137	+	.	.
scaffold1836	subtractBed	intrn	432068	432939	.	-	.	Parent=CGI_10026282;
	scaffold1836	TRF	Tandem_Repeat	432068	432939	721	+	.	.
scaffold1836	subtractBed	intrn	435453	436167	.	-	.	Parent=CGI_10026282;
	scaffold1836	TRF	Tandem_Repeat	435453	436167	839	+	.	.
scaffold1836	subtractBed	intrn	446155	446208	.	+	.	Parent=CGI_10026284;
	scaffold1836	TRF	Tandem_Repeat	446155	446208	74	+	.	.
scaffold1836	subtractBed	intrn	448220	448580	.	+	.	Parent=CGI_10026284;
	scaffold1836	TRF	Tandem_Repeat	448197	448580	615	+	.	.
scaffold1836	subtractBed	intrn	485226	485277	.	-	.	Parent=CGI_10026287;
	scaffold1836	TRF	Tandem_Repeat	485226	485277	104	+	.	.
scaffold1836	subtractBed	intrn	486411	486786	.	-	.	Parent=CGI_10026287;
	scaffold1836	TRF	Tandem_Repeat	486411	486786	215	+	.	.
scaffold1836	subtractBed	intrn	486411	486789	.	-	.	Parent=CGI_10026287;
	scaffold1836	TRF	Tandem_Repeat	486411	486789	260	+	.	.
scaffold1836	subtractBed	intrn	516828	517461	.	-	.	Parent=CGI_10026293;
	scaffold1836	TRF	Tandem_Repeat	516828	517461	654	+	.	.
scaffold1836	subtractBed	intrn	516826	517424	.	-	.	Parent=CGI_10026293;
	scaffold1836	TRF	Tandem_Repeat	516826	517424	645	+	.	.
scaffold1836	subtractBed	intrn	516828	517424	.	-	.	Parent=CGI_10026293;
	scaffold1836	TRF	Tandem_Repeat	516828	517424	673	+	.	.
scaffold1836	subtractBed	intrn	552646	553102	.	-	.	Parent=CGI_10026294;
	scaffold1836	TRF	Tandem_Repeat	552646	553102	564	+	.	.
scaffold1836	subtractBed	intrn	552646	553102	.	-	.	Parent=CGI_10026294;
	scaffold1836	TRF	Tandem_Repeat	552646	553102	587	+	.	.
scaffold1836	subtractBed	intrn	555919	556639	.	-	.	Parent=CGI_10026294;
	scaffold1836	TRF	Tandem_Repeat	555919	556639	712	+	.	.
scaffold1836	subtractBed	intrn	561440	561580	.	-	.	Parent=CGI_10026294;
	scaffold1836	TRF	Tandem_Repeat	561440	561580	115	+	.	.
scaffold1836	subtractBed	intrn	565871	567067	.	-	.	Parent=CGI_10026294;
	scaffold1836	TRF	Tandem_Repeat	565871	567067	1966	+	.	.
scaffold1836	subtractBed	intrn	670505	671380	.	-	.	Parent=CGI_10026298;
	scaffold1836	TRF	Tandem_Repeat	670505	671380	1334	+	.	.
scaffold1836	subtractBed	intrn	670520	671380	.	-	.	Parent=CGI_10026298;
	scaffold1836	TRF	Tandem_Repeat	670520	671380	1334	+	.	.
scaffold1836	subtractBed	intrn	670505	671380	.	-	.	Parent=CGI_10026298;
	scaffold1836	TRF	Tandem_Repeat	670505	671380	1220	+	.	.
scaffold1836	subtractBed	intrn	673685	673880	.	-	.	Parent=CGI_10026298;
	scaffold1836	TRF	Tandem_Repeat	673685	673880	302	+	.	.
scaffold1836	subtractBed	intrn	675125	675249	.	-	.	Parent=CGI_10026298;
	scaffold1836	TRF	Tandem_Repeat	675125	675249	64	+	.	.
scaffold1836	subtractBed	intrn	706639	707221	.	-	.	Parent=CGI_10026299;
	scaffold1836	TRF	Tandem_Repeat	706639	707221	470	+	.	.
scaffold1836	subtractBed	intrn	706637	707221	.	-	.	Parent=CGI_10026299;
	scaffold1836	TRF	Tandem_Repeat	706637	707221	629	+	.	.
scaffold1836	subtractBed	intrn	715534	715698	.	+	.	Parent=CGI_10026300;
	scaffold1836	WUBlastX	LTR_Gypsy	715534	715698	79	+	.	.
scaffold1836	subtractBed	intrn	715537	715650	.	+	.	Parent=CGI_10026300;
	scaffold1836	WUBlastX	LTR_Gypsy	715537	715650	81	+	.	.
scaffold1836	subtractBed	intrn	718370	718764	.	+	.	Parent=CGI_10026300;
	scaffold1836	TRF	Tandem_Repeat	718370	718764	499	+	.	.
scaffold1836	subtractBed	intrn	726586	726804	.	+	.	Parent=CGI_10026301;
	scaffold1836	TRF	Tandem_Repeat	726571	726804	263	+	.	.
scaffold1836	subtractBed	intrn	729238	729335	.	+	.	Parent=CGI_10026301;
	scaffold1836	TRF	Tandem_Repeat	729238	729335	178	+	.	.
scaffold1836	subtractBed	intrn	769713	770468	.	-	.	Parent=CGI_10026306;
	scaffold1836	TRF	Tandem_Repeat	769713	770478	1102	+	.	.
scaffold1836	subtractBed	intrn	790745	790789	.	-	.	Parent=CGI_10026309;
	scaffold1836	TRF	Tandem_Repeat	790745	790789	81	+	.	.
scaffold1836	subtractBed	intrn	858827	859006	.	+	.	Parent=CGI_10026314;
	scaffold1836	TRF	Tandem_Repeat	858827	859006	60	+	.	.
scaffold1836	subtractBed	intrn	871942	871999	.	+	.	Parent=CGI_10026314;
	scaffold1836	TRF	Tandem_Repeat	871942	871999	52	+	.	.
scaffold1836	subtractBed	intrn	943076	943198	.	-	.	Parent=CGI_10026318;
	scaffold1836	TRF	Tandem_Repeat	943076	943198	183	+	.	.
scaffold1836	subtractBed	intrn	943658	943711	.	-	.	Parent=CGI_10026318;
	scaffold1836	TRF	Tandem_Repeat	943658	943711	108	+	.	.
scaffold1836	subtractBed	intrn	1025522	1025527	.	-	.	Parent=CGI_10026321;
	scaffold1836	WUBlastX	LTR_Gypsy	1025171	1025527	232	-	.	.
scaffold1836	subtractBed	intrn	1028107	1028274	.	-	.	Parent=CGI_10026321;
	scaffold1836	WUBlastX	DNA_Harbinger	1028107	1028274	49	+	.	.
scaffold1836	subtractBed	intrn	1026682	1026807	.	-	.	Parent=CGI_10026321;
	scaffold1836	WUBlastX	LTR_Pao	1026682	1026807	29	-	.	.
scaffold1836	subtractBed	intrn	1025530	1026786	.	-	.	Parent=CGI_10026321;
	scaffold1836	WUBlastX	LTR_Gypsy	1025530	1026786	1012	-	.	.
scaffold1836	subtractBed	intrn	1050845	1050886	.	-	.	Parent=CGI_10026321;
	scaffold1836	TRF	Tandem_Repeat	1050845	1050886	75	+	.	.
scaffold1836	subtractBed	intrn	1054251	1054308	.	-	.	Parent=CGI_10026321;
	scaffold1836	TRF	Tandem_Repeat	1054251	1054308	116	+	.	.
scaffold1836	subtractBed	intrn	1076774	1076818	.	-	.	Parent=CGI_10026323;
	scaffold1836	TRF	Tandem_Repeat	1076774	1076818	90	+	.	.
scaffold1836	subtractBed	intrn	1081398	1081523	.	-	.	Parent=CGI_10026323;
	scaffold1836	TRF	Tandem_Repeat	1081398	1081523	206	+	.	.
scaffold1836	subtractBed	intrn	1098428	1098457	.	-	.	Parent=CGI_10026325;
	scaffold1836	TRF	Tandem_Repeat	1098428	1098457	60	+	.	.
scaffold1836	subtractBed	intrn	1098511	1098562	.	-	.	Parent=CGI_10026325;
	scaffold1836	TRF	Tandem_Repeat	1098511	1098562	68	+	.	.
scaffold1836	subtractBed	intrn	1098523	1098561	.	-	.	Parent=CGI_10026325;
	scaffold1836	TRF	Tandem_Repeat	1098523	1098561	51	+	.	.
scaffold1836	subtractBed	intrn	1100048	1100085	.	-	.	Parent=CGI_10026325;
	scaffold1836	TRF	Tandem_Repeat	1100048	1100085	51	+	.	.
scaffold1836	subtractBed	intrn	1100259	1101273	.	-	.	Parent=CGI_10026325;
	scaffold1836	TRF	Tandem_Repeat	1100259	1101273	1212	+	.	.
scaffold1838	subtractBed	intrn	10021	10308	.	+	.	Parent=CGI_10014237;
	scaffold1838	TRF	Tandem_Repeat	10021	10308	416	+	.	.
scaffold1838	subtractBed	intrn	21288	21378	.	+	.	Parent=CGI_10014238;
	scaffold1838	TRF	Tandem_Repeat	21288	21378	83	+	.	.
scaffold1838	subtractBed	intrn	21284	21396	.	+	.	Parent=CGI_10014238;
	scaffold1838	TRF	Tandem_Repeat	21284	21396	199	+	.	.
scaffold1838	subtractBed	intrn	61078	61103	.	-	.	Parent=CGI_10014241;
	scaffold1838	TRF	Tandem_Repeat	61078	61103	52	+	.	.
scaffold1838	subtractBed	intrn	82232	82290	.	+	.	Parent=CGI_10014242;
	scaffold1838	TRF	Tandem_Repeat	82232	82290	111	+	.	.
scaffold1838	subtractBed	intrn	99587	99646	.	+	.	Parent=CGI_10014243;
	scaffold1838	TRF	Tandem_Repeat	99587	99646	57	+	.	.
scaffold1838	subtractBed	intrn	99022	99558	.	+	.	Parent=CGI_10014243;
	scaffold1838	WUBlastX	LINE_RTE-X	99022	99558	125	+	.	.
scaffold1838	subtractBed	intrn	191810	191839	.	+	.	Parent=CGI_10014250;
	scaffold1838	TRF	Tandem_Repeat	191810	191839	60	+	.	.
scaffold1838	subtractBed	intrn	211093	211137	.	+	.	Parent=CGI_10014252;
	scaffold1838	TRF	Tandem_Repeat	211093	211137	90	+	.	.
scaffold1838	subtractBed	intrn	220624	220669	.	-	.	Parent=CGI_10014253;
	scaffold1838	TRF	Tandem_Repeat	220624	220669	92	+	.	.
scaffold1838	subtractBed	intrn	239242	239275	.	+	.	Parent=CGI_10014256;
	scaffold1838	TRF	Tandem_Repeat	239242	239275	68	+	.	.
scaffold1838	subtractBed	intrn	255042	255069	.	-	.	Parent=CGI_10014258;
	scaffold1838	TRF	Tandem_Repeat	255042	255069	56	+	.	.
scaffold1838	subtractBed	intrn	301400	301468	.	+	.	Parent=CGI_10014260;
	scaffold1838	TRF	Tandem_Repeat	301400	301468	138	+	.	.
scaffold1838	subtractBed	intrn	312016	313508	.	+	.	Parent=CGI_10014261;
	scaffold1838	TRF	Tandem_Repeat	312016	313508	1864	+	.	.
scaffold1838	subtractBed	intrn	335834	336778	.	+	.	Parent=CGI_10014264;
	scaffold1838	WUBlastX	LINE_L2	335834	336778	141	-	.	.
scaffold1838	subtractBed	intrn	335846	336583	.	+	.	Parent=CGI_10014264;
	scaffold1838	WUBlastX	LINE_RTE-X	335846	336583	324	-	.	.
scaffold1838	subtractBed	intrn	335735	336367	.	+	.	Parent=CGI_10014264;
	scaffold1838	WUBlastX	LINE_RTE-X	335735	336367	187	-	.	.
scaffold1838	subtractBed	intrn	333962	335248	.	+	.	Parent=CGI_10014264;
	scaffold1838	WUBlastX	LINE_RTE-X	333962	335248	461	-	.	.
scaffold1838	subtractBed	intrn	335507	336361	.	+	.	Parent=CGI_10014264;
	scaffold1838	WUBlastX	LINE_L2	335507	336361	96	-	.	.
scaffold1838	subtractBed	intrn	340466	340525	.	+	.	Parent=CGI_10014264;
	scaffold1838	TRF	Tandem_Repeat	340466	340525	120	+	.	.
scaffold1838	subtractBed	intrn	343410	343546	.	+	.	Parent=CGI_10014264;
	scaffold1838	TRF	Tandem_Repeat	343410	343546	130	+	.	.
scaffold1838	subtractBed	intrn	364181	364381	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_Proto2	364181	364489	55	+	.	.
scaffold1838	subtractBed	intrn	364280	364381	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_Proto2	364280	364492	60	+	.	.
scaffold1838	subtractBed	intrn	365215	367605	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_RTE-X	365215	367605	397	+	.	.
scaffold1838	subtractBed	intrn	365710	367221	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_RTE-X	365710	367221	424	+	.	.
scaffold1838	subtractBed	intrn	364467	364489	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_Proto2	364181	364489	55	+	.	.
scaffold1838	subtractBed	intrn	364467	364492	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_Proto2	364280	364492	60	+	.	.
scaffold1838	subtractBed	intrn	364606	367227	.	+	.	Parent=CGI_10014266;
	scaffold1838	WUBlastX	LINE_Proto2	364606	367227	360	+	.	.
scaffold1838	subtractBed	intrn	378808	378876	.	-	.	Parent=CGI_10014269;
	scaffold1838	TRF	Tandem_Repeat	378808	378876	138	+	.	.
scaffold1838	subtractBed	intrn	381964	382032	.	-	.	Parent=CGI_10014269;
	scaffold1838	TRF	Tandem_Repeat	381964	382032	138	+	.	.
scaffold1839	subtractBed	intrn	22014	22156	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	22014	22156	187	+	.	.
scaffold1839	subtractBed	intrn	25447	25605	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	25447	25605	119	+	.	.
scaffold1839	subtractBed	intrn	26163	26842	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	26163	26842	786	+	.	.
scaffold1839	subtractBed	intrn	31628	31738	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	31628	31738	93	+	.	.
scaffold1839	subtractBed	intrn	31917	32183	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	31917	32183	438	+	.	.
scaffold1839	subtractBed	intrn	36580	36788	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	36580	36788	190	+	.	.
scaffold1839	subtractBed	intrn	36990	37027	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	36990	37027	51	+	.	.
scaffold1839	subtractBed	intrn	42913	43227	.	+	.	Parent=CGI_10003408;
	scaffold1839	TRF	Tandem_Repeat	42913	43227	612	+	.	.
scaffold184	subtractBed	intrn	114205	114234	.	-	.	Parent=CGI_10014792;
	scaffold184	TRF	Tandem_Repeat	114205	114234	60	+	.	.
scaffold184	subtractBed	intrn	119743	119809	.	+	.	Parent=CGI_10014793;
	scaffold184	TRF	Tandem_Repeat	119743	119809	134	+	.	.
scaffold184	subtractBed	intrn	160590	161024	.	-	.	Parent=CGI_10014796;
	scaffold184	WUBlastX	LINE_Penelope	160590	161024	303	-	.	.
scaffold184	subtractBed	intrn	160503	161024	.	-	.	Parent=CGI_10014796;
	scaffold184	WUBlastX	LINE_Penelope	160503	161024	67	-	.	.
scaffold184	subtractBed	intrn	188790	188858	.	-	.	Parent=CGI_10014797;
	scaffold184	TRF	Tandem_Repeat	188790	188858	138	+	.	.
scaffold184	subtractBed	intrn	194183	194551	.	-	.	Parent=CGI_10014797;
	scaffold184	WUBlastX	DNA_TcMar-Tc1	194183	194551	55	+	.	.
scaffold184	subtractBed	intrn	194545	194868	.	-	.	Parent=CGI_10014797;
	scaffold184	WUBlastX	DNA_TcMar-Tc1	194545	194868	117	+	.	.
scaffold184	subtractBed	intrn	193968	194258	.	-	.	Parent=CGI_10014797;
	scaffold184	WUBlastX	DNA_TcMar-Tc1	193968	194258	50	+	.	.
scaffold184	subtractBed	intrn	193881	194294	.	-	.	Parent=CGI_10014797;
	scaffold184	WUBlastX	DNA_TcMar-Tc1	193881	194294	26	+	.	.
scaffold184	subtractBed	intrn	249479	249880	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_Merlin	249479	249880	111	+	.	.
scaffold184	subtractBed	intrn	249263	249838	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_Merlin	249263	249838	99	+	.	.
scaffold184	subtractBed	intrn	251291	251701	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_PiggyBac	251291	251701	57	-	.	.
scaffold184	subtractBed	intrn	251800	251904	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_PiggyBac	251800	251904	24	-	.	.
scaffold184	subtractBed	intrn	251429	251776	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_PiggyBac	251429	251776	183	-	.	.
scaffold184	subtractBed	intrn	251800	251874	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_PiggyBac	251800	251874	28	-	.	.
scaffold184	subtractBed	intrn	251393	251845	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_PiggyBac	251393	251845	117	-	.	.
scaffold184	subtractBed	intrn	254388	254541	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_IS4EU	254388	255116	27	+	.	.
scaffold184	subtractBed	intrn	255030	255116	.	+	.	Parent=CGI_10014799;
	scaffold184	WUBlastX	DNA_IS4EU	254388	255116	27	+	.	.
scaffold184	subtractBed	intrn	265865	265922	.	-	.	Parent=CGI_10014800;
	scaffold184	TRF	Tandem_Repeat	265865	265922	116	+	.	.
scaffold184	subtractBed	intrn	299078	299106	.	-	.	Parent=CGI_10014801;
	scaffold184	TRF	Tandem_Repeat	299078	299106	58	+	.	.
scaffold184	subtractBed	intrn	386376	386443	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	386376	386443	120	+	.	.
scaffold184	subtractBed	intrn	399056	399114	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	399056	399114	73	+	.	.
scaffold184	subtractBed	intrn	399057	399198	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	399057	399198	94	+	.	.
scaffold184	subtractBed	intrn	399133	399198	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	399133	399198	69	+	.	.
scaffold184	subtractBed	intrn	399133	399264	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	399133	399264	90	+	.	.
scaffold184	subtractBed	intrn	399799	399884	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	399799	399884	136	+	.	.
scaffold184	subtractBed	intrn	401621	401745	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	401621	401745	73	+	.	.
scaffold184	subtractBed	intrn	402653	402721	.	-	.	Parent=CGI_10014802;
	scaffold184	TRF	Tandem_Repeat	402653	402721	57	+	.	.
scaffold1840	subtractBed	intrn	21167	21194	.	+	.	Parent=CGI_10006070;
	scaffold1840	TRF	Tandem_Repeat	21167	21194	56	+	.	.
scaffold1840	subtractBed	intrn	33202	33237	.	+	.	Parent=CGI_10006070;
	scaffold1840	TRF	Tandem_Repeat	33202	33237	72	+	.	.
scaffold1840	subtractBed	intrn	101484	101530	.	-	.	Parent=CGI_10006072;
	scaffold1840	TRF	Tandem_Repeat	101484	101530	94	+	.	.
scaffold1841	subtractBed	intrn	20074	20148	.	-	.	Parent=CGI_10008265;
	scaffold1841	TRF	Tandem_Repeat	20074	20148	141	+	.	.
scaffold1841	subtractBed	intrn	104019	104043	.	-	.	Parent=CGI_10008273;
	scaffold1841	WUBlastX	LTR_Pao	104019	104447	34	-	.	.
scaffold1841	subtractBed	intrn	106478	106569	.	-	.	Parent=CGI_10008273;
	scaffold1841	TRF	Tandem_Repeat	106478	106569	175	+	.	.
scaffold1841	subtractBed	intrn	108623	108666	.	-	.	Parent=CGI_10008273;
	scaffold1841	TRF	Tandem_Repeat	108623	108666	72	+	.	.
scaffold1841	subtractBed	intrn	157870	157929	.	+	.	Parent=CGI_10008277;
	scaffold1841	TRF	Tandem_Repeat	157870	157929	111	+	.	.
scaffold1842	subtractBed	intrn	48022	48195	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	48022	48195	200	+	.	.
scaffold1842	subtractBed	intrn	49426	49455	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	49426	49455	60	+	.	.
scaffold1842	subtractBed	intrn	52665	52696	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	52665	52696	64	+	.	.
scaffold1842	subtractBed	intrn	54552	54904	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	54552	54904	535	+	.	.
scaffold1842	subtractBed	intrn	54702	54801	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	54702	54801	60	+	.	.
scaffold1842	subtractBed	intrn	54552	54904	.	-	.	Parent=CGI_10003201;
	scaffold1842	TRF	Tandem_Repeat	54552	54904	544	+	.	.
scaffold1842	subtractBed	intrn	58675	59151	.	-	.	Parent=CGI_10003201;
	scaffold1842	WUBlastX	LINE_L2	58675	59151	101	-	.	.
scaffold1843	subtractBed	intrn	150721	152115	.	-	.	Parent=CGI_10011886;
	scaffold1843	TRF	Tandem_Repeat	150721	152115	889	+	.	.
scaffold1843	subtractBed	intrn	150817	152088	.	-	.	Parent=CGI_10011886;
	scaffold1843	TRF	Tandem_Repeat	150817	152088	1340	+	.	.
scaffold1843	subtractBed	intrn	150740	152114	.	-	.	Parent=CGI_10011886;
	scaffold1843	TRF	Tandem_Repeat	150740	152114	1090	+	.	.
scaffold1843	subtractBed	intrn	153773	153806	.	-	.	Parent=CGI_10011886;
	scaffold1843	TRF	Tandem_Repeat	153773	153806	50	+	.	.
scaffold1843	subtractBed	intrn	173642	173677	.	-	.	Parent=CGI_10011888;
	scaffold1843	TRF	Tandem_Repeat	173642	173677	72	+	.	.
scaffold1843	subtractBed	intrn	173720	173786	.	-	.	Parent=CGI_10011888;
	scaffold1843	TRF	Tandem_Repeat	173720	173786	134	+	.	.
scaffold1843	subtractBed	intrn	179131	179356	.	+	.	Parent=CGI_10011889;
	scaffold1843	TRF	Tandem_Repeat	179131	179356	416	+	.	.
scaffold1843	subtractBed	intrn	197476	197501	.	-	.	Parent=CGI_10011891;
	scaffold1843	TRF	Tandem_Repeat	197476	197501	52	+	.	.
scaffold1844	subtractBed	intrn	3587	3810	.	+	.	Parent=CGI_10006612;
	scaffold1844	TRF	Tandem_Repeat	3587	3810	412	+	.	.
scaffold1844	subtractBed	intrn	101313	101433	.	+	.	Parent=CGI_10006617;
	scaffold1844	TRF	Tandem_Repeat	101313	101433	118	+	.	.
scaffold1844	subtractBed	intrn	101671	101705	.	+	.	Parent=CGI_10006617;
	scaffold1844	TRF	Tandem_Repeat	101671	101705	70	+	.	.
scaffold1844	subtractBed	intrn	101792	101819	.	+	.	Parent=CGI_10006617;
	scaffold1844	TRF	Tandem_Repeat	101792	101819	56	+	.	.
scaffold1844	subtractBed	intrn	102672	102703	.	+	.	Parent=CGI_10006617;
	scaffold1844	TRF	Tandem_Repeat	102672	102703	55	+	.	.
scaffold1844	subtractBed	intrn	102919	103024	.	+	.	Parent=CGI_10006617;
	scaffold1844	TRF	Tandem_Repeat	102919	103024	99	+	.	.
scaffold1844	subtractBed	intrn	125717	125818	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-BovB	125717	125818	29	+	.	.
scaffold1844	subtractBed	intrn	125702	125800	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	125702	125800	56	+	.	.
scaffold1844	subtractBed	intrn	125437	125562	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_L1	125437	125562	27	+	.	.
scaffold1844	subtractBed	intrn	125630	125794	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	125630	125794	30	+	.	.
scaffold1844	subtractBed	intrn	125499	125591	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	125499	125591	25	+	.	.
scaffold1844	subtractBed	intrn	125818	126459	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	125818	126459	350	+	.	.
scaffold1844	subtractBed	intrn	126422	126712	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	126422	126712	114	+	.	.
scaffold1844	subtractBed	intrn	126669	127493	.	+	.	Parent=CGI_10006619;
	scaffold1844	WUBlastX	LINE_RTE-X	126669	127493	161	+	.	.
scaffold1844	subtractBed	intrn	150973	151159	.	+	.	Parent=CGI_10006620;
	scaffold1844	TRF	Tandem_Repeat	150973	151159	311	+	.	.
scaffold1845	subtractBed	intrn	80445	80620	.	-	.	Parent=CGI_10011986;
	scaffold1845	TRF	Tandem_Repeat	80445	80620	307	+	.	.
scaffold1845	subtractBed	intrn	80769	80843	.	-	.	Parent=CGI_10011986;
	scaffold1845	TRF	Tandem_Repeat	80769	80843	107	+	.	.
scaffold1845	subtractBed	intrn	112697	112729	.	-	.	Parent=CGI_10011988;
	scaffold1845	TRF	Tandem_Repeat	112697	112729	66	+	.	.
scaffold1845	subtractBed	intrn	113930	113972	.	-	.	Parent=CGI_10011988;
	scaffold1845	TRF	Tandem_Repeat	113930	113972	86	+	.	.
scaffold1845	subtractBed	intrn	112697	112729	.	+	.	Parent=CGI_10011990;
	scaffold1845	TRF	Tandem_Repeat	112697	112729	66	+	.	.
scaffold1845	subtractBed	intrn	113930	113972	.	+	.	Parent=CGI_10011990;
	scaffold1845	TRF	Tandem_Repeat	113930	113972	86	+	.	.
scaffold1845	subtractBed	intrn	214009	214896	.	-	.	Parent=CGI_10012000;
	scaffold1845	TRF	Tandem_Repeat	214009	214896	1050	+	.	.
scaffold1845	subtractBed	intrn	217175	217232	.	-	.	Parent=CGI_10012000;
	scaffold1845	TRF	Tandem_Repeat	217175	217232	73	+	.	.
scaffold1845	subtractBed	intrn	217175	217226	.	-	.	Parent=CGI_10012000;
	scaffold1845	TRF	Tandem_Repeat	217175	217226	86	+	.	.
scaffold1846	subtractBed	intrn	82935	83277	.	-	.	Parent=CGI_10004556;
	scaffold1846	TRF	Tandem_Repeat	82935	83277	195	+	.	.
scaffold1846	subtractBed	intrn	82974	83314	.	-	.	Parent=CGI_10004556;
	scaffold1846	TRF	Tandem_Repeat	82974	83314	219	+	.	.
scaffold1846	subtractBed	intrn	89854	89895	.	-	.	Parent=CGI_10004556;
	scaffold1846	TRF	Tandem_Repeat	89854	89895	84	+	.	.
scaffold1847	subtractBed	intrn	14529	14584	.	-	.	Parent=CGI_10003457;
	scaffold1847	TRF	Tandem_Repeat	14529	14584	112	+	.	.
scaffold1847	subtractBed	intrn	14584	14627	.	-	.	Parent=CGI_10003457;
	scaffold1847	TRF	Tandem_Repeat	14584	14627	79	+	.	.
scaffold1848	subtractBed	intrn	60596	60647	.	-	.	Parent=CGI_10006425;
	scaffold1848	TRF	Tandem_Repeat	60596	60647	70	+	.	.
scaffold1848	subtractBed	intrn	77231	77826	.	-	.	Parent=CGI_10006426;
	scaffold1848	TRF	Tandem_Repeat	77231	77833	620	+	.	.
scaffold1848	subtractBed	intrn	92165	94349	.	-	.	Parent=CGI_10006426;
	scaffold1848	TRF	Tandem_Repeat	92165	94351	2733	+	.	.
scaffold1848	subtractBed	intrn	77231	77826	.	+	.	Parent=CGI_10006427;
	scaffold1848	TRF	Tandem_Repeat	77231	77833	620	+	.	.
scaffold1848	subtractBed	intrn	92165	94349	.	+	.	Parent=CGI_10006427;
	scaffold1848	TRF	Tandem_Repeat	92165	94351	2733	+	.	.
scaffold1849	subtractBed	intrn	162	227	.	+	.	Parent=CGI_10015908;
	scaffold1849	TRF	Tandem_Repeat	162	227	132	+	.	.
scaffold1849	subtractBed	intrn	36508	36546	.	+	.	Parent=CGI_10015910;
	scaffold1849	TRF	Tandem_Repeat	36508	36546	78	+	.	.
scaffold1849	subtractBed	intrn	50161	50541	.	+	.	Parent=CGI_10015911;
	scaffold1849	TRF	Tandem_Repeat	50161	50541	753	+	.	.
scaffold1849	subtractBed	intrn	55745	55838	.	+	.	Parent=CGI_10015911;
	scaffold1849	TRF	Tandem_Repeat	55745	55838	179	+	.	.
scaffold1849	subtractBed	intrn	50161	50541	.	-	.	Parent=CGI_10015912;
	scaffold1849	TRF	Tandem_Repeat	50161	50541	753	+	.	.
scaffold1849	subtractBed	intrn	83390	84017	.	-	.	Parent=CGI_10015914;
	scaffold1849	TRF	Tandem_Repeat	83390	84017	767	+	.	.
scaffold1849	subtractBed	intrn	84183	84596	.	-	.	Parent=CGI_10015914;
	scaffold1849	WUBlastX	LINE_CR1	84183	84596	89	-	.	.
scaffold1849	subtractBed	intrn	84294	85283	.	-	.	Parent=CGI_10015914;
	scaffold1849	WUBlastX	LINE_CR1	84294	85283	99	-	.	.
scaffold1849	subtractBed	intrn	84213	85475	.	-	.	Parent=CGI_10015914;
	scaffold1849	WUBlastX	LINE_CR1	84213	85475	44	-	.	.
scaffold1849	subtractBed	intrn	84309	85055	.	-	.	Parent=CGI_10015914;
	scaffold1849	WUBlastX	LINE_CR1	84309	85055	142	-	.	.
scaffold1849	subtractBed	intrn	94844	94982	.	-	.	Parent=CGI_10015914;
	scaffold1849	TRF	Tandem_Repeat	94844	94982	109	+	.	.
scaffold1849	subtractBed	intrn	95370	95667	.	-	.	Parent=CGI_10015914;
	scaffold1849	TRF	Tandem_Repeat	95370	95667	331	+	.	.
scaffold1849	subtractBed	intrn	104560	104872	.	-	.	Parent=CGI_10015914;
	scaffold1849	TRF	Tandem_Repeat	104560	104872	136	+	.	.
scaffold1849	subtractBed	intrn	94844	94982	.	+	.	Parent=CGI_10015915;
	scaffold1849	TRF	Tandem_Repeat	94844	94982	109	+	.	.
scaffold1849	subtractBed	intrn	95370	95667	.	+	.	Parent=CGI_10015915;
	scaffold1849	TRF	Tandem_Repeat	95370	95667	331	+	.	.
scaffold1849	subtractBed	intrn	104560	104872	.	+	.	Parent=CGI_10015915;
	scaffold1849	TRF	Tandem_Repeat	104560	104872	136	+	.	.
scaffold1849	subtractBed	intrn	134133	134342	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	134133	134342	42	-	.	.
scaffold1849	subtractBed	intrn	133753	134088	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	133753	134088	234	-	.	.
scaffold1849	subtractBed	intrn	132974	133759	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	132974	133759	505	-	.	.
scaffold1849	subtractBed	intrn	134232	134750	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	134232	134750	285	-	.	.
scaffold1849	subtractBed	intrn	134699	135022	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	134699	135022	177	-	.	.
scaffold1849	subtractBed	intrn	132893	133384	.	+	.	Parent=CGI_10015917;
	scaffold1849	WUBlastX	LTR_Gypsy	132893	133384	57	-	.	.
scaffold1849	subtractBed	intrn	277543	278207	.	+	.	Parent=CGI_10015918;
	scaffold1849	TRF	Tandem_Repeat	277543	278207	899	+	.	.
scaffold1849	subtractBed	intrn	279342	281101	.	+	.	Parent=CGI_10015918;
	scaffold1849	TRF	Tandem_Repeat	279342	281101	2456	+	.	.
scaffold1849	subtractBed	intrn	279342	281101	.	+	.	Parent=CGI_10015918;
	scaffold1849	TRF	Tandem_Repeat	279342	281101	2462	+	.	.
scaffold1849	subtractBed	intrn	349432	349638	.	+	.	Parent=CGI_10015920;
	scaffold1849	WUBlastX	LINE_L2	349432	349638	51	-	.	.
scaffold1849	subtractBed	intrn	349432	349596	.	+	.	Parent=CGI_10015920;
	scaffold1849	WUBlastX	LINE_CR1-L2	349432	349596	70	-	.	.
scaffold1849	subtractBed	intrn	349596	349658	.	+	.	Parent=CGI_10015920;
	scaffold1849	WUBlastX	LINE_CR1-L2	349596	349658	49	-	.	.
scaffold1850	subtractBed	intrn	1917	1970	.	+	.	Parent=CGI_10009877;
	scaffold1850	TRF	Tandem_Repeat	1917	1970	108	+	.	.
scaffold1850	subtractBed	intrn	48209	48255	.	-	.	Parent=CGI_10009880;
	scaffold1850	TRF	Tandem_Repeat	48209	48255	94	+	.	.
scaffold1850	subtractBed	intrn	63717	63765	.	+	.	Parent=CGI_10009881;
	scaffold1850	TRF	Tandem_Repeat	63717	63765	55	+	.	.
scaffold1850	subtractBed	intrn	64093	64341	.	+	.	Parent=CGI_10009881;
	scaffold1850	WUBlastX	LINE_RTE-X	64093	64341	24	+	.	.
scaffold1850	subtractBed	intrn	63717	63765	.	-	.	Parent=CGI_10009882;
	scaffold1850	TRF	Tandem_Repeat	63717	63765	55	+	.	.
scaffold1850	subtractBed	intrn	64093	64341	.	-	.	Parent=CGI_10009882;
	scaffold1850	WUBlastX	LINE_RTE-X	64093	64341	24	+	.	.
scaffold1850	subtractBed	intrn	81273	81329	.	+	.	Parent=CGI_10009883;
	scaffold1850	TRF	Tandem_Repeat	81273	81329	114	+	.	.
scaffold1850	subtractBed	intrn	81351	81377	.	+	.	Parent=CGI_10009883;
	scaffold1850	TRF	Tandem_Repeat	81351	81377	54	+	.	.
scaffold1850	subtractBed	intrn	136784	136843	.	+	.	Parent=CGI_10009887;
	scaffold1850	TRF	Tandem_Repeat	136784	136843	57	+	.	.
scaffold1850	subtractBed	intrn	137120	137194	.	+	.	Parent=CGI_10009887;
	scaffold1850	TRF	Tandem_Repeat	137120	137194	143	+	.	.
scaffold1850	subtractBed	intrn	138394	138459	.	+	.	Parent=CGI_10009887;
	scaffold1850	TRF	Tandem_Repeat	138394	138459	132	+	.	.
scaffold1850	subtractBed	intrn	138479	138510	.	+	.	Parent=CGI_10009887;
	scaffold1850	TRF	Tandem_Repeat	138479	138510	64	+	.	.
scaffold1850	subtractBed	intrn	142110	142150	.	-	.	Parent=CGI_10009888;
	scaffold1850	TRF	Tandem_Repeat	142110	142150	82	+	.	.
scaffold1850	subtractBed	intrn	146569	146646	.	-	.	Parent=CGI_10009888;
	scaffold1850	TRF	Tandem_Repeat	146569	146646	140	+	.	.
scaffold1850	subtractBed	intrn	146661	146699	.	-	.	Parent=CGI_10009888;
	scaffold1850	TRF	Tandem_Repeat	146661	146699	62	+	.	.
scaffold1850	subtractBed	intrn	148308	148374	.	-	.	Parent=CGI_10009888;
	scaffold1850	TRF	Tandem_Repeat	148308	148374	89	+	.	.
scaffold1850	subtractBed	intrn	148869	148902	.	-	.	Parent=CGI_10009888;
	scaffold1850	TRF	Tandem_Repeat	148869	148902	50	+	.	.
scaffold1850	subtractBed	intrn	154783	154808	.	-	.	Parent=CGI_10009889;
	scaffold1850	TRF	Tandem_Repeat	154783	154808	52	+	.	.
scaffold1850	subtractBed	intrn	172751	172840	.	-	.	Parent=CGI_10009890;
	scaffold1850	TRF	Tandem_Repeat	172751	172840	146	+	.	.
scaffold1850	subtractBed	intrn	198213	198579	.	+	.	Parent=CGI_10009891;
	scaffold1850	TRF	Tandem_Repeat	198213	198579	671	+	.	.
scaffold1851	subtractBed	intrn	101673	101872	.	-	.	Parent=CGI_10005104;
	scaffold1851	TRF	Tandem_Repeat	101673	101872	319	+	.	.
scaffold1851	subtractBed	intrn	104012	104611	.	-	.	Parent=CGI_10005104;
	scaffold1851	WUBlastX	LTR_Gypsy	104012	104611	188	+	.	.
scaffold1851	subtractBed	intrn	104174	104689	.	-	.	Parent=CGI_10005104;
	scaffold1851	WUBlastX	LTR_Gypsy	104174	104689	80	+	.	.
scaffold1851	subtractBed	intrn	102905	104500	.	-	.	Parent=CGI_10005104;
	scaffold1851	WUBlastX	LTR_Gypsy	102905	104500	910	+	.	.
scaffold1854	subtractBed	intrn	21096	21473	.	-	.	Parent=CGI_10004409;
	scaffold1854	WUBlastX	LTR_Ngaro	21096	21473	140	-	.	.
scaffold1854	subtractBed	intrn	20882	21055	.	-	.	Parent=CGI_10004409;
	scaffold1854	WUBlastX	LTR_Ngaro	20882	21055	109	-	.	.
scaffold1854	subtractBed	intrn	21132	21665	.	-	.	Parent=CGI_10004409;
	scaffold1854	WUBlastX	LTR_Ngaro	21132	21665	127	-	.	.
scaffold1855	subtractBed	intrn	9397	9444	.	-	.	Parent=CGI_10008863;
	scaffold1855	TRF	Tandem_Repeat	9397	9444	87	+	.	.
scaffold1855	subtractBed	intrn	9444	9468	.	-	.	Parent=CGI_10008863;
	scaffold1855	TRF	Tandem_Repeat	9444	9468	50	+	.	.
scaffold1855	subtractBed	intrn	65283	65324	.	+	.	Parent=CGI_10008867;
	scaffold1855	TRF	Tandem_Repeat	65283	65324	75	+	.	.
scaffold1855	subtractBed	intrn	93902	93947	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	93902	93947	83	+	.	.
scaffold1855	subtractBed	intrn	94356	94382	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	94356	94382	54	+	.	.
scaffold1855	subtractBed	intrn	98070	98116	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	98070	98116	51	+	.	.
scaffold1855	subtractBed	intrn	99084	99144	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	99084	99144	122	+	.	.
scaffold1855	subtractBed	intrn	100160	100197	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	100160	100197	76	+	.	.
scaffold1855	subtractBed	intrn	103685	103735	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	103685	103735	93	+	.	.
scaffold1855	subtractBed	intrn	109893	109959	.	-	.	Parent=CGI_10008868;
	scaffold1855	TRF	Tandem_Repeat	109893	109959	134	+	.	.
scaffold1855	subtractBed	intrn	109893	109959	.	+	.	Parent=CGI_10008869;
	scaffold1855	TRF	Tandem_Repeat	109893	109959	134	+	.	.
scaffold1855	subtractBed	intrn	137665	137811	.	-	.	Parent=CGI_10008870;
	scaffold1855	WUBlastX	LTR_Gypsy	137665	137898	26	-	.	.
scaffold1855	subtractBed	intrn	189873	189913	.	-	.	Parent=CGI_10008876;
	scaffold1855	TRF	Tandem_Repeat	189873	189913	82	+	.	.
scaffold1855	subtractBed	intrn	190345	190385	.	-	.	Parent=CGI_10008876;
	scaffold1855	TRF	Tandem_Repeat	190345	190385	82	+	.	.
scaffold1855	subtractBed	intrn	201914	202098	.	-	.	Parent=CGI_10008876;
	scaffold1855	TRF	Tandem_Repeat	201914	202098	264	+	.	.
scaffold1855	subtractBed	intrn	202903	203647	.	-	.	Parent=CGI_10008876;
	scaffold1855	TRF	Tandem_Repeat	202903	203647	1151	+	.	.
scaffold1855	subtractBed	intrn	203821	203868	.	-	.	Parent=CGI_10008876;
	scaffold1855	TRF	Tandem_Repeat	203821	203868	55	+	.	.
scaffold1855	subtractBed	intrn	205682	206389	.	-	.	Parent=CGI_10008876;
	scaffold1855	WUBlastX	LINE_RTE-X	205682	206389	158	-	.	.
scaffold1855	subtractBed	intrn	201339	201620	.	-	.	Parent=CGI_10008876;
	scaffold1855	WUBlastX	LINE_RTE-X	201339	201620	47	+	.	.
scaffold1855	subtractBed	intrn	201065	201490	.	-	.	Parent=CGI_10008876;
	scaffold1855	WUBlastX	LINE_RTE-X	201065	201490	181	+	.	.
scaffold1855	subtractBed	intrn	205603	205668	.	-	.	Parent=CGI_10008876;
	scaffold1855	WUBlastX	LINE_RTE-X	205603	205668	21	-	.	.
scaffold1856	subtractBed	intrn	8664	8720	.	+	.	Parent=CGI_10007316;
	scaffold1856	TRF	Tandem_Repeat	8664	8720	107	+	.	.
scaffold1856	subtractBed	intrn	25600	25626	.	+	.	Parent=CGI_10007316;
	scaffold1856	TRF	Tandem_Repeat	25600	25626	54	+	.	.
scaffold1856	subtractBed	intrn	26924	26960	.	+	.	Parent=CGI_10007316;
	scaffold1856	TRF	Tandem_Repeat	26924	26960	65	+	.	.
scaffold1856	subtractBed	intrn	28489	28515	.	+	.	Parent=CGI_10007316;
	scaffold1856	TRF	Tandem_Repeat	28489	28515	54	+	.	.
scaffold1856	subtractBed	intrn	61471	61665	.	+	.	Parent=CGI_10007317;
	scaffold1856	TRF	Tandem_Repeat	61471	61665	363	+	.	.
scaffold1856	subtractBed	intrn	70065	70226	.	+	.	Parent=CGI_10007317;
	scaffold1856	TRF	Tandem_Repeat	70065	70226	297	+	.	.
scaffold1856	subtractBed	intrn	77295	77396	.	-	.	Parent=CGI_10007318;
	scaffold1856	TRF	Tandem_Repeat	77295	77396	127	+	.	.
scaffold1856	subtractBed	intrn	84847	84897	.	+	.	Parent=CGI_10007320;
	scaffold1856	TRF	Tandem_Repeat	84847	84897	102	+	.	.
scaffold1856	subtractBed	intrn	91738	91764	.	-	.	Parent=CGI_10007321;
	scaffold1856	TRF	Tandem_Repeat	91738	91764	54	+	.	.
scaffold1856	subtractBed	intrn	100651	100687	.	-	.	Parent=CGI_10007322;
	scaffold1856	TRF	Tandem_Repeat	100651	100687	65	+	.	.
scaffold1856	subtractBed	intrn	102524	102594	.	-	.	Parent=CGI_10007322;
	scaffold1856	TRF	Tandem_Repeat	102524	102594	70	+	.	.
scaffold1856	subtractBed	intrn	105804	105835	.	-	.	Parent=CGI_10007322;
	scaffold1856	TRF	Tandem_Repeat	105804	105835	64	+	.	.
scaffold1856	subtractBed	intrn	116113	116198	.	-	.	Parent=CGI_10007323;
	scaffold1856	TRF	Tandem_Repeat	116113	116198	165	+	.	.
scaffold1856	subtractBed	intrn	138945	139197	.	-	.	Parent=CGI_10007324;
	scaffold1856	TRF	Tandem_Repeat	138945	139197	314	+	.	.
scaffold1856	subtractBed	intrn	152855	152896	.	-	.	Parent=CGI_10007326;
	scaffold1856	TRF	Tandem_Repeat	152855	152896	84	+	.	.
scaffold1856	subtractBed	intrn	159611	160566	.	+	.	Parent=CGI_10007328;
	scaffold1856	TRF	Tandem_Repeat	159611	160566	1370	+	.	.
scaffold1856	subtractBed	intrn	160590	160643	.	+	.	Parent=CGI_10007328;
	scaffold1856	TRF	Tandem_Repeat	160590	160643	63	+	.	.
scaffold1856	subtractBed	intrn	160593	160652	.	+	.	Parent=CGI_10007328;
	scaffold1856	TRF	Tandem_Repeat	160593	160652	66	+	.	.
scaffold1856	subtractBed	intrn	160590	160652	.	+	.	Parent=CGI_10007328;
	scaffold1856	TRF	Tandem_Repeat	160590	160652	54	+	.	.
scaffold1856	subtractBed	intrn	169496	169527	.	-	.	Parent=CGI_10007329;
	scaffold1856	TRF	Tandem_Repeat	169496	169527	50	+	.	.
scaffold1856	subtractBed	intrn	172807	172859	.	-	.	Parent=CGI_10007329;
	scaffold1856	TRF	Tandem_Repeat	172807	172859	106	+	.	.
scaffold1856	subtractBed	intrn	172860	172886	.	-	.	Parent=CGI_10007329;
	scaffold1856	TRF	Tandem_Repeat	172860	172886	54	+	.	.
scaffold1857	subtractBed	intrn	33453	33540	.	+	.	Parent=CGI_10020194;
	scaffold1857	TRF	Tandem_Repeat	33453	33540	135	+	.	.
scaffold1857	subtractBed	intrn	170575	170622	.	-	.	Parent=CGI_10020198;
	scaffold1857	TRF	Tandem_Repeat	170575	170622	96	+	.	.
scaffold1857	subtractBed	intrn	174555	174602	.	-	.	Parent=CGI_10020198;
	scaffold1857	TRF	Tandem_Repeat	174555	174602	60	+	.	.
scaffold1857	subtractBed	intrn	186195	186226	.	-	.	Parent=CGI_10020199;
	scaffold1857	TRF	Tandem_Repeat	186195	186226	55	+	.	.
scaffold1857	subtractBed	intrn	186623	186918	.	-	.	Parent=CGI_10020199;
	scaffold1857	TRF	Tandem_Repeat	186623	186918	319	+	.	.
scaffold1857	subtractBed	intrn	188043	188189	.	-	.	Parent=CGI_10020199;
	scaffold1857	TRF	Tandem_Repeat	188043	188189	165	+	.	.
scaffold1857	subtractBed	intrn	192492	192546	.	-	.	Parent=CGI_10020199;
	scaffold1857	TRF	Tandem_Repeat	192492	192546	110	+	.	.
scaffold1857	subtractBed	intrn	192762	192813	.	-	.	Parent=CGI_10020199;
	scaffold1857	TRF	Tandem_Repeat	192762	192813	104	+	.	.
scaffold1857	subtractBed	intrn	310502	310558	.	-	.	Parent=CGI_10020202;
	scaffold1857	TRF	Tandem_Repeat	310502	310558	107	+	.	.
scaffold1857	subtractBed	intrn	340678	340741	.	-	.	Parent=CGI_10020202;
	scaffold1857	TRF	Tandem_Repeat	340678	340741	101	+	.	.
scaffold1857	subtractBed	intrn	344520	345161	.	-	.	Parent=CGI_10020202;
	scaffold1857	TRF	Tandem_Repeat	344520	345161	691	+	.	.
scaffold1857	subtractBed	intrn	344520	345161	.	-	.	Parent=CGI_10020202;
	scaffold1857	TRF	Tandem_Repeat	344520	345161	852	+	.	.
scaffold1857	subtractBed	intrn	350825	350990	.	-	.	Parent=CGI_10020202;
	scaffold1857	TRF	Tandem_Repeat	350825	350990	305	+	.	.
scaffold1857	subtractBed	intrn	437094	437669	.	+	.	Parent=CGI_10020210;
	scaffold1857	WUBlastX	LTR_Gypsy-Cigr	437094	437669	195	+	.	.
scaffold1857	subtractBed	intrn	446207	446953	.	+	.	Parent=CGI_10020210;
	scaffold1857	TRF	Tandem_Repeat	446207	446953	870	+	.	.
scaffold1857	subtractBed	intrn	492984	493019	.	-	.	Parent=CGI_10020213;
	scaffold1857	TRF	Tandem_Repeat	492984	493019	72	+	.	.
scaffold1857	subtractBed	intrn	514096	514150	.	-	.	Parent=CGI_10020214;
	scaffold1857	TRF	Tandem_Repeat	514096	514150	56	+	.	.
scaffold1857	subtractBed	intrn	515104	515161	.	-	.	Parent=CGI_10020214;
	scaffold1857	TRF	Tandem_Repeat	515104	515161	116	+	.	.
scaffold1857	subtractBed	intrn	530994	531052	.	-	.	Parent=CGI_10020218;
	scaffold1857	TRF	Tandem_Repeat	530994	531052	118	+	.	.
scaffold1857	subtractBed	intrn	539122	539302	.	-	.	Parent=CGI_10020218;
	scaffold1857	TRF	Tandem_Repeat	539122	539302	150	+	.	.
scaffold1857	subtractBed	intrn	569590	569692	.	-	.	Parent=CGI_10020220;
	scaffold1857	TRF	Tandem_Repeat	569590	569692	172	+	.	.
scaffold1857	subtractBed	intrn	572182	572260	.	-	.	Parent=CGI_10020220;
	scaffold1857	TRF	Tandem_Repeat	572182	572260	63	+	.	.
scaffold1857	subtractBed	intrn	572190	572255	.	-	.	Parent=CGI_10020220;
	scaffold1857	TRF	Tandem_Repeat	572190	572255	53	+	.	.
scaffold1857	subtractBed	intrn	576673	576784	.	-	.	Parent=CGI_10020221;
	scaffold1857	TRF	Tandem_Repeat	576673	576784	125	+	.	.
scaffold1857	subtractBed	intrn	576673	576784	.	-	.	Parent=CGI_10020221;
	scaffold1857	TRF	Tandem_Repeat	576673	576784	145	+	.	.
scaffold1858	subtractBed	intrn	4762	4827	.	-	.	Parent=CGI_10010439;
	scaffold1858	TRF	Tandem_Repeat	4762	4827	89	+	.	.
scaffold1858	subtractBed	intrn	34994	35079	.	-	.	Parent=CGI_10010439;
	scaffold1858	TRF	Tandem_Repeat	34994	35079	154	+	.	.
scaffold1858	subtractBed	intrn	69200	69249	.	+	.	Parent=CGI_10010443;
	scaffold1858	TRF	Tandem_Repeat	69200	69249	100	+	.	.
scaffold1858	subtractBed	intrn	70705	70757	.	+	.	Parent=CGI_10010443;
	scaffold1858	TRF	Tandem_Repeat	70705	70757	106	+	.	.
scaffold1858	subtractBed	intrn	76374	76399	.	+	.	Parent=CGI_10010443;
	scaffold1858	TRF	Tandem_Repeat	76374	76399	52	+	.	.
scaffold1858	subtractBed	intrn	72248	72565	.	+	.	Parent=CGI_10010443;
	scaffold1858	WUBlastX	LINE_CR1-L2	72248	72565	86	+	.	.
scaffold1858	subtractBed	intrn	72140	72586	.	+	.	Parent=CGI_10010443;
	scaffold1858	WUBlastX	LINE_CR1-L2	72140	72586	44	+	.	.
scaffold1858	subtractBed	intrn	100953	101911	.	-	.	Parent=CGI_10010446;
	scaffold1858	TRF	Tandem_Repeat	100953	101911	1428	+	.	.
scaffold1858	subtractBed	intrn	101942	101989	.	-	.	Parent=CGI_10010446;
	scaffold1858	TRF	Tandem_Repeat	101942	101989	60	+	.	.
scaffold1858	subtractBed	intrn	120862	121695	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1-Tx1	120862	121695	123	-	.	.
scaffold1858	subtractBed	intrn	121700	121972	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1-Tx1	121700	121972	86	-	.	.
scaffold1858	subtractBed	intrn	121944	122102	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1-Tx1	121944	122102	111	-	.	.
scaffold1858	subtractBed	intrn	121974	122357	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1	121974	122357	32	-	.	.
scaffold1858	subtractBed	intrn	121917	122141	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1-Tx1	121917	122141	86	-	.	.
scaffold1858	subtractBed	intrn	121944	122204	.	-	.	Parent=CGI_10010447;
	scaffold1858	WUBlastX	LINE_L1	121944	122204	77	-	.	.
scaffold1858	subtractBed	intrn	229017	229062	.	+	.	Parent=CGI_10010453;
	scaffold1858	TRF	Tandem_Repeat	229017	229062	67	+	.	.
scaffold1858	subtractBed	intrn	229012	229065	.	+	.	Parent=CGI_10010453;
	scaffold1858	TRF	Tandem_Repeat	229012	229065	67	+	.	.
scaffold1858	subtractBed	intrn	229232	230245	.	+	.	Parent=CGI_10010453;
	scaffold1858	TRF	Tandem_Repeat	229232	230245	1580	+	.	.
scaffold1858	subtractBed	intrn	235271	235307	.	+	.	Parent=CGI_10010453;
	scaffold1858	TRF	Tandem_Repeat	235271	235307	65	+	.	.
scaffold1858	subtractBed	intrn	251581	251618	.	+	.	Parent=CGI_10010455;
	scaffold1858	TRF	Tandem_Repeat	251581	251618	76	+	.	.
scaffold1859	subtractBed	intrn	3921	3963	.	+	.	Parent=CGI_10007224;
	scaffold1859	TRF	Tandem_Repeat	3921	3963	86	+	.	.
scaffold1859	subtractBed	intrn	7722	8457	.	+	.	Parent=CGI_10007224;
	scaffold1859	TRF	Tandem_Repeat	7722	8457	580	+	.	.
scaffold1859	subtractBed	intrn	11539	11872	.	+	.	Parent=CGI_10007224;
	scaffold1859	TRF	Tandem_Repeat	11539	11872	463	+	.	.
scaffold1859	subtractBed	intrn	21359	21388	.	+	.	Parent=CGI_10007224;
	scaffold1859	TRF	Tandem_Repeat	21359	21388	53	+	.	.
scaffold1859	subtractBed	intrn	61600	62774	.	-	.	Parent=CGI_10007226;
	scaffold1859	TRF	Tandem_Repeat	61600	62774	1942	+	.	.
scaffold1859	subtractBed	intrn	71241	71285	.	-	.	Parent=CGI_10007226;
	scaffold1859	TRF	Tandem_Repeat	71241	71285	90	+	.	.
scaffold1859	subtractBed	intrn	75759	76019	.	-	.	Parent=CGI_10007226;
	scaffold1859	WUBlastX	DNA_TcMar-Tc1	75759	76019	64	+	.	.
scaffold1859	subtractBed	intrn	75759	76019	.	+	.	Parent=CGI_10007227;
	scaffold1859	WUBlastX	DNA_TcMar-Tc1	75759	76019	64	+	.	.
scaffold1859	subtractBed	intrn	88513	88543	.	+	.	Parent=CGI_10007227;
	scaffold1859	TRF	Tandem_Repeat	88513	88543	62	+	.	.
scaffold1859	subtractBed	intrn	117900	117938	.	+	.	Parent=CGI_10007229;
	scaffold1859	TRF	Tandem_Repeat	117900	117938	69	+	.	.
scaffold1859	subtractBed	intrn	148689	148727	.	-	.	Parent=CGI_10007230;
	scaffold1859	TRF	Tandem_Repeat	148689	148727	78	+	.	.
scaffold1859	subtractBed	intrn	162661	162712	.	-	.	Parent=CGI_10007232;
	scaffold1859	TRF	Tandem_Repeat	162661	162712	50	+	.	.
scaffold1859	subtractBed	intrn	162900	162958	.	-	.	Parent=CGI_10007232;
	scaffold1859	TRF	Tandem_Repeat	162900	162958	55	+	.	.
scaffold186	subtractBed	intrn	23250	23321	.	+	.	Parent=CGI_10012601;
	scaffold186	WUBlastX	DNA_Harbinger	22971	23354	85	+	.	.
scaffold186	subtractBed	intrn	23354	23354	.	+	.	Parent=CGI_10012601;
	scaffold186	WUBlastX	DNA_Harbinger	22971	23354	85	+	.	.
scaffold186	subtractBed	intrn	23578	23826	.	+	.	Parent=CGI_10012601;
	scaffold186	WUBlastX	DNA_Harbinger	23578	23826	219	+	.	.
scaffold186	subtractBed	intrn	24112	24116	.	+	.	Parent=CGI_10012601;
	scaffold186	WUBlastX	DNA_Harbinger	24112	24330	67	+	.	.
scaffold186	subtractBed	intrn	26264	26319	.	+	.	Parent=CGI_10012602;
	scaffold186	WUBlastX	DNA_Kolobok-Hyd	26264	27292	26	+	.	.
scaffold186	subtractBed	intrn	26433	26517	.	+	.	Parent=CGI_10012602;
	scaffold186	WUBlastX	DNA_Kolobok-Hyd	26264	27292	26	+	.	.
scaffold186	subtractBed	intrn	26433	26437	.	+	.	Parent=CGI_10012602;
	scaffold186	WUBlastX	DNA_Kolobok-Hyd	26381	26437	41	+	.	.
scaffold186	subtractBed	intrn	50202	50260	.	+	.	Parent=CGI_10012605;
	scaffold186	TRF	Tandem_Repeat	50202	50260	109	+	.	.
scaffold186	subtractBed	intrn	50202	50256	.	+	.	Parent=CGI_10012605;
	scaffold186	TRF	Tandem_Repeat	50202	50256	65	+	.	.
scaffold186	subtractBed	intrn	50268	51059	.	+	.	Parent=CGI_10012605;
	scaffold186	TRF	Tandem_Repeat	50268	51059	1107	+	.	.
scaffold186	subtractBed	intrn	57792	57827	.	+	.	Parent=CGI_10012606;
	scaffold186	TRF	Tandem_Repeat	57792	57827	56	+	.	.
scaffold186	subtractBed	intrn	67042	67083	.	+	.	Parent=CGI_10012606;
	scaffold186	TRF	Tandem_Repeat	67042	67083	68	+	.	.
scaffold186	subtractBed	intrn	75493	75547	.	+	.	Parent=CGI_10012607;
	scaffold186	TRF	Tandem_Repeat	75493	75547	110	+	.	.
scaffold186	subtractBed	intrn	76460	76546	.	+	.	Parent=CGI_10012607;
	scaffold186	TRF	Tandem_Repeat	76460	76546	140	+	.	.
scaffold186	subtractBed	intrn	92909	92936	.	+	.	Parent=CGI_10012609;
	scaffold186	TRF	Tandem_Repeat	92909	92936	56	+	.	.
scaffold186	subtractBed	intrn	116310	116369	.	+	.	Parent=CGI_10012609;
	scaffold186	TRF	Tandem_Repeat	116310	116369	68	+	.	.
scaffold186	subtractBed	intrn	116316	116380	.	+	.	Parent=CGI_10012609;
	scaffold186	TRF	Tandem_Repeat	116316	116380	61	+	.	.
scaffold186	subtractBed	intrn	116310	116378	.	+	.	Parent=CGI_10012609;
	scaffold186	TRF	Tandem_Repeat	116310	116378	96	+	.	.
scaffold186	subtractBed	intrn	116298	116366	.	+	.	Parent=CGI_10012609;
	scaffold186	TRF	Tandem_Repeat	116298	116366	111	+	.	.
scaffold186	subtractBed	intrn	178156	178187	.	+	.	Parent=CGI_10012613;
	scaffold186	TRF	Tandem_Repeat	178156	178187	64	+	.	.
scaffold186	subtractBed	intrn	230739	231161	.	+	.	Parent=CGI_10012615;
	scaffold186	WUBlastX	DNA_TcMar-Tc2	230739	231161	120	+	.	.
scaffold186	subtractBed	intrn	230631	231107	.	+	.	Parent=CGI_10012615;
	scaffold186	WUBlastX	DNA_TcMar-Tc2	230631	231107	107	+	.	.
scaffold186	subtractBed	intrn	230739	231161	.	-	.	Parent=CGI_10012616;
	scaffold186	WUBlastX	DNA_TcMar-Tc2	230739	231161	120	+	.	.
scaffold186	subtractBed	intrn	230631	231107	.	-	.	Parent=CGI_10012616;
	scaffold186	WUBlastX	DNA_TcMar-Tc2	230631	231107	107	+	.	.
scaffold186	subtractBed	intrn	240584	240847	.	-	.	Parent=CGI_10012616;
	scaffold186	WUBlastX	LINE_L1-Tx1	240584	240847	23	+	.	.
scaffold186	subtractBed	intrn	249637	249679	.	-	.	Parent=CGI_10012616;
	scaffold186	TRF	Tandem_Repeat	249637	249679	54	+	.	.
scaffold186	subtractBed	intrn	315426	315498	.	-	.	Parent=CGI_10012618;
	scaffold186	TRF	Tandem_Repeat	315426	315498	146	+	.	.
scaffold186	subtractBed	intrn	317882	317914	.	-	.	Parent=CGI_10012618;
	scaffold186	TRF	Tandem_Repeat	317882	317914	66	+	.	.
scaffold186	subtractBed	intrn	319791	320800	.	-	.	Parent=CGI_10012618;
	scaffold186	TRF	Tandem_Repeat	319791	320800	1036	+	.	.
scaffold186	subtractBed	intrn	326247	326343	.	-	.	Parent=CGI_10012618;
	scaffold186	TRF	Tandem_Repeat	326247	326343	187	+	.	.
scaffold186	subtractBed	intrn	326649	326711	.	-	.	Parent=CGI_10012618;
	scaffold186	TRF	Tandem_Repeat	326649	326711	126	+	.	.
scaffold186	subtractBed	intrn	319791	320800	.	+	.	Parent=CGI_10012619;
	scaffold186	TRF	Tandem_Repeat	319791	320800	1036	+	.	.
scaffold1860	subtractBed	intrn	69447	69504	.	-	.	Parent=CGI_10013937;
	scaffold1860	TRF	Tandem_Repeat	69447	69504	116	+	.	.
scaffold1860	subtractBed	intrn	90920	90944	.	+	.	Parent=CGI_10013940;
	scaffold1860	TRF	Tandem_Repeat	90920	90944	50	+	.	.
scaffold1860	subtractBed	intrn	94634	94687	.	+	.	Parent=CGI_10013940;
	scaffold1860	TRF	Tandem_Repeat	94634	94687	108	+	.	.
scaffold1860	subtractBed	intrn	92351	92830	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_RTE-BovB	92351	92830	155	-	.	.
scaffold1860	subtractBed	intrn	95461	95665	.	+	.	Parent=CGI_10013940;
	scaffold1860	TRF	Tandem_Repeat	95461	95665	367	+	.	.
scaffold1860	subtractBed	intrn	97420	97527	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1	97420	97527	57	-	.	.
scaffold1860	subtractBed	intrn	97181	97372	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1	97181	97372	42	-	.	.
scaffold1860	subtractBed	intrn	97081	97206	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1-Tx1	97081	97206	38	-	.	.
scaffold1860	subtractBed	intrn	97420	97650	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1-Tx1	97420	97650	43	-	.	.
scaffold1860	subtractBed	intrn	97229	97372	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1-Tx1	97229	97372	49	-	.	.
scaffold1860	subtractBed	intrn	97420	97605	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1-Tx1	97420	97605	54	-	.	.
scaffold1860	subtractBed	intrn	97743	98312	.	+	.	Parent=CGI_10013940;
	scaffold1860	WUBlastX	LINE_L1-Tx1	97743	98312	73	-	.	.
scaffold1860	subtractBed	intrn	110130	110172	.	+	.	Parent=CGI_10013941;
	scaffold1860	TRF	Tandem_Repeat	110130	110172	86	+	.	.
scaffold1860	subtractBed	intrn	174056	174285	.	-	.	Parent=CGI_10013947;
	scaffold1860	TRF	Tandem_Repeat	174056	174313	276	+	.	.
scaffold1860	subtractBed	intrn	329745	329793	.	+	.	Parent=CGI_10013950;
	scaffold1860	TRF	Tandem_Repeat	329745	329793	98	+	.	.
scaffold1860	subtractBed	intrn	334219	334761	.	+	.	Parent=CGI_10013950;
	scaffold1860	WUBlastX	LINE_RTE-X	334219	334761	32	-	.	.
scaffold1860	subtractBed	intrn	334222	334659	.	+	.	Parent=CGI_10013950;
	scaffold1860	WUBlastX	LINE_RTE-X	334222	334659	201	-	.	.
scaffold1860	subtractBed	intrn	334123	334524	.	+	.	Parent=CGI_10013950;
	scaffold1860	WUBlastX	LINE_Rex-Babar	334123	334524	61	-	.	.
scaffold1860	subtractBed	intrn	340337	340380	.	+	.	Parent=CGI_10013950;
	scaffold1860	TRF	Tandem_Repeat	340337	340380	61	+	.	.
scaffold1860	subtractBed	intrn	340325	340380	.	+	.	Parent=CGI_10013950;
	scaffold1860	TRF	Tandem_Repeat	340325	340380	50	+	.	.
scaffold1860	subtractBed	intrn	351800	351875	.	+	.	Parent=CGI_10013951;
	scaffold1860	TRF	Tandem_Repeat	351800	351875	107	+	.	.
scaffold1860	subtractBed	intrn	351949	351995	.	+	.	Parent=CGI_10013951;
	scaffold1860	TRF	Tandem_Repeat	351949	351995	60	+	.	.
scaffold1861	subtractBed	intrn	7971	8019	.	-	.	Parent=CGI_10004667;
	scaffold1861	TRF	Tandem_Repeat	7971	8019	98	+	.	.
scaffold1861	subtractBed	intrn	22826	23020	.	-	.	Parent=CGI_10004668;
	scaffold1861	WUBlastX	DNA_Crypton	22826	23020	62	+	.	.
scaffold1861	subtractBed	intrn	37947	37992	.	+	.	Parent=CGI_10004669;
	scaffold1861	TRF	Tandem_Repeat	37947	37992	56	+	.	.
scaffold1861	subtractBed	intrn	37950	37988	.	+	.	Parent=CGI_10004669;
	scaffold1861	TRF	Tandem_Repeat	37950	37988	60	+	.	.
scaffold1861	subtractBed	intrn	40283	40729	.	+	.	Parent=CGI_10004669;
	scaffold1861	WUBlastX	DNA_Crypton	40283	40729	49	+	.	.
scaffold1861	subtractBed	intrn	56559	56643	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	56559	56643	84	+	.	.
scaffold1861	subtractBed	intrn	57060	57214	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	57060	57214	139	+	.	.
scaffold1861	subtractBed	intrn	57053	57242	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	57053	57242	245	+	.	.
scaffold1861	subtractBed	intrn	57242	57379	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	57242	57379	107	+	.	.
scaffold1861	subtractBed	intrn	57443	57528	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	57443	57528	64	+	.	.
scaffold1861	subtractBed	intrn	61322	61406	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	61322	61406	84	+	.	.
scaffold1861	subtractBed	intrn	61493	61684	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	61493	61684	231	+	.	.
scaffold1861	subtractBed	intrn	61491	61684	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	61491	61684	145	+	.	.
scaffold1861	subtractBed	intrn	61684	61821	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	61684	61821	107	+	.	.
scaffold1861	subtractBed	intrn	65514	65567	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	65514	65567	108	+	.	.
scaffold1861	subtractBed	intrn	72151	72954	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	72151	72954	471	+	.	.
scaffold1861	subtractBed	intrn	72158	72912	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	72158	72912	293	+	.	.
scaffold1861	subtractBed	intrn	72821	72943	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	72821	72943	88	+	.	.
scaffold1861	subtractBed	intrn	72852	72976	.	-	.	Parent=CGI_10004670;
	scaffold1861	TRF	Tandem_Repeat	72852	72976	115	+	.	.
scaffold1862	subtractBed	intrn	1243	1304	.	-	.	Parent=CGI_10021884;
	scaffold1862	TRF	Tandem_Repeat	1243	1304	80	+	.	.
scaffold1862	subtractBed	intrn	1246	1303	.	-	.	Parent=CGI_10021884;
	scaffold1862	TRF	Tandem_Repeat	1246	1303	55	+	.	.
scaffold1862	subtractBed	intrn	18870	18918	.	-	.	Parent=CGI_10021885;
	scaffold1862	TRF	Tandem_Repeat	18870	18918	89	+	.	.
scaffold1862	subtractBed	intrn	126568	127352	.	-	.	Parent=CGI_10021889;
	scaffold1862	TRF	Tandem_Repeat	126568	127364	1148	+	.	.
scaffold1862	subtractBed	intrn	130302	130370	.	-	.	Parent=CGI_10021889;
	scaffold1862	TRF	Tandem_Repeat	130302	130370	129	+	.	.
scaffold1862	subtractBed	intrn	131703	131769	.	-	.	Parent=CGI_10021889;
	scaffold1862	TRF	Tandem_Repeat	131703	131769	57	+	.	.
scaffold1862	subtractBed	intrn	131699	131755	.	-	.	Parent=CGI_10021889;
	scaffold1862	TRF	Tandem_Repeat	131699	131755	55	+	.	.
scaffold1862	subtractBed	intrn	138763	138857	.	+	.	Parent=CGI_10021890;
	scaffold1862	TRF	Tandem_Repeat	138763	138857	172	+	.	.
scaffold1862	subtractBed	intrn	138763	138967	.	+	.	Parent=CGI_10021890;
	scaffold1862	TRF	Tandem_Repeat	138763	138967	299	+	.	.
scaffold1862	subtractBed	intrn	138861	138967	.	+	.	Parent=CGI_10021890;
	scaffold1862	TRF	Tandem_Repeat	138861	138967	205	+	.	.
scaffold1862	subtractBed	intrn	170650	170712	.	-	.	Parent=CGI_10021893;
	scaffold1862	TRF	Tandem_Repeat	170650	170712	126	+	.	.
scaffold1862	subtractBed	intrn	179906	179930	.	-	.	Parent=CGI_10021893;
	scaffold1862	TRF	Tandem_Repeat	179906	179930	50	+	.	.
scaffold1862	subtractBed	intrn	190301	190933	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1	190301	190933	177	+	.	.
scaffold1862	subtractBed	intrn	191071	191376	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	191071	191376	72	+	.	.
scaffold1862	subtractBed	intrn	190891	191364	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1	190891	191364	47	+	.	.
scaffold1862	subtractBed	intrn	189690	190310	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1	189690	190310	248	+	.	.
scaffold1862	subtractBed	intrn	190181	190837	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	190181	190837	308	+	.	.
scaffold1862	subtractBed	intrn	189804	190298	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	189804	190298	352	+	.	.
scaffold1862	subtractBed	intrn	194597	195139	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1	194597	195139	97	+	.	.
scaffold1862	subtractBed	intrn	194792	195166	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	194792	195166	243	+	.	.
scaffold1862	subtractBed	intrn	194711	195166	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	194711	195166	187	+	.	.
scaffold1862	subtractBed	intrn	195171	196733	.	-	.	Parent=CGI_10021893;
	scaffold1862	WUBlastX	LINE_L1-Tx1	195171	196733	335	+	.	.
scaffold1862	subtractBed	intrn	243855	243894	.	-	.	Parent=CGI_10021894;
	scaffold1862	TRF	Tandem_Repeat	243855	243894	73	+	.	.
scaffold1862	subtractBed	intrn	249778	249826	.	+	.	Parent=CGI_10021895;
	scaffold1862	TRF	Tandem_Repeat	249778	249826	89	+	.	.
scaffold1862	subtractBed	intrn	266602	266644	.	+	.	Parent=CGI_10021896;
	scaffold1862	TRF	Tandem_Repeat	266602	266644	86	+	.	.
scaffold1862	subtractBed	intrn	268701	269479	.	+	.	Parent=CGI_10021896;
	scaffold1862	TRF	Tandem_Repeat	268701	269479	1008	+	.	.
scaffold1862	subtractBed	intrn	311306	311653	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	311306	311653	138	+	.	.
scaffold1862	subtractBed	intrn	311445	311609	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	311445	311609	80	+	.	.
scaffold1862	subtractBed	intrn	312895	313216	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	312895	313216	509	+	.	.
scaffold1862	subtractBed	intrn	313712	313750	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	313712	313750	78	+	.	.
scaffold1862	subtractBed	intrn	314153	314423	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	314153	314423	416	+	.	.
scaffold1862	subtractBed	intrn	314919	314987	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	314919	314987	138	+	.	.
scaffold1862	subtractBed	intrn	311031	311687	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	311031	311687	1041	+	.	.
scaffold1862	subtractBed	intrn	311253	311398	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	311253	311398	58	+	.	.
scaffold1862	subtractBed	intrn	311253	311573	.	+	.	Parent=CGI_10021898;
	scaffold1862	TRF	Tandem_Repeat	311253	311573	143	+	.	.
scaffold1862	subtractBed	intrn	357429	357480	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	357429	357480	104	+	.	.
scaffold1862	subtractBed	intrn	361358	361432	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	361358	361432	141	+	.	.
scaffold1862	subtractBed	intrn	361489	361574	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	361489	361574	63	+	.	.
scaffold1862	subtractBed	intrn	361506	361572	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	361506	361572	98	+	.	.
scaffold1862	subtractBed	intrn	368081	368108	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	368081	368108	56	+	.	.
scaffold1862	subtractBed	intrn	368108	368138	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	368108	368138	62	+	.	.
scaffold1862	subtractBed	intrn	368494	368971	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	368494	368971	609	+	.	.
scaffold1862	subtractBed	intrn	368494	368971	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	368494	368971	594	+	.	.
scaffold1862	subtractBed	intrn	377025	377262	.	+	.	Parent=CGI_10021901;
	scaffold1862	TRF	Tandem_Repeat	377025	377262	253	+	.	.
scaffold1862	subtractBed	intrn	382302	382704	.	+	.	Parent=CGI_10021902;
	scaffold1862	TRF	Tandem_Repeat	382302	382704	653	+	.	.
scaffold1862	subtractBed	intrn	388731	388881	.	+	.	Parent=CGI_10021903;
	scaffold1862	TRF	Tandem_Repeat	388710	388881	179	+	.	.
scaffold1862	subtractBed	intrn	390480	391290	.	+	.	Parent=CGI_10021903;
	scaffold1862	TRF	Tandem_Repeat	390480	391290	580	+	.	.
scaffold1862	subtractBed	intrn	390497	391290	.	+	.	Parent=CGI_10021903;
	scaffold1862	TRF	Tandem_Repeat	390497	391290	933	+	.	.
scaffold1862	subtractBed	intrn	390497	391290	.	+	.	Parent=CGI_10021903;
	scaffold1862	TRF	Tandem_Repeat	390497	391290	1111	+	.	.
scaffold1862	subtractBed	intrn	511841	512009	.	+	.	Parent=CGI_10021914;
	scaffold1862	TRF	Tandem_Repeat	511841	512009	230	+	.	.
scaffold1862	subtractBed	intrn	517765	518006	.	+	.	Parent=CGI_10021914;
	scaffold1862	TRF	Tandem_Repeat	517765	518006	317	+	.	.
scaffold1862	subtractBed	intrn	545497	545528	.	+	.	Parent=CGI_10021916;
	scaffold1862	TRF	Tandem_Repeat	545497	545528	57	+	.	.
scaffold1862	subtractBed	intrn	550526	551618	.	+	.	Parent=CGI_10021916;
	scaffold1862	TRF	Tandem_Repeat	550526	551618	1683	+	.	.
scaffold1862	subtractBed	intrn	553325	553415	.	+	.	Parent=CGI_10021916;
	scaffold1862	TRF	Tandem_Repeat	553325	553415	80	+	.	.
scaffold1862	subtractBed	intrn	545497	545528	.	-	.	Parent=CGI_10021917;
	scaffold1862	TRF	Tandem_Repeat	545497	545528	57	+	.	.
scaffold1862	subtractBed	intrn	550526	551618	.	-	.	Parent=CGI_10021917;
	scaffold1862	TRF	Tandem_Repeat	550526	551618	1683	+	.	.
scaffold1862	subtractBed	intrn	553325	553415	.	-	.	Parent=CGI_10021917;
	scaffold1862	TRF	Tandem_Repeat	553325	553415	80	+	.	.
scaffold1862	subtractBed	intrn	619466	619654	.	+	.	Parent=CGI_10021919;
	scaffold1862	TRF	Tandem_Repeat	619466	619654	155	+	.	.
scaffold1862	subtractBed	intrn	622776	622891	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	622759	622891	162	+	.	.
scaffold1862	subtractBed	intrn	623067	623665	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	623067	623670	652	+	.	.
scaffold1862	subtractBed	intrn	623067	623665	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	623067	623670	746	+	.	.
scaffold1862	subtractBed	intrn	628454	628727	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	628445	628727	129	+	.	.
scaffold1862	subtractBed	intrn	628472	628656	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	628472	628656	96	+	.	.
scaffold1862	subtractBed	intrn	628522	628728	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	628522	628728	164	+	.	.
scaffold1862	subtractBed	intrn	632116	632390	.	+	.	Parent=CGI_10021920;
	scaffold1862	TRF	Tandem_Repeat	632116	632390	336	+	.	.
scaffold1862	subtractBed	intrn	650661	650774	.	-	.	Parent=CGI_10021921;
	scaffold1862	TRF	Tandem_Repeat	650661	650774	108	+	.	.
scaffold1862	subtractBed	intrn	652387	652804	.	-	.	Parent=CGI_10021921;
	scaffold1862	TRF	Tandem_Repeat	652387	652804	434	+	.	.
scaffold1862	subtractBed	intrn	652394	652795	.	-	.	Parent=CGI_10021921;
	scaffold1862	TRF	Tandem_Repeat	652394	652795	553	+	.	.
scaffold1862	subtractBed	intrn	656081	656861	.	-	.	Parent=CGI_10021923;
	scaffold1862	TRF	Tandem_Repeat	656081	656861	553	+	.	.
scaffold1862	subtractBed	intrn	656181	656941	.	-	.	Parent=CGI_10021923;
	scaffold1862	TRF	Tandem_Repeat	656181	656941	1218	+	.	.
scaffold1862	subtractBed	intrn	657028	657073	.	-	.	Parent=CGI_10021923;
	scaffold1862	TRF	Tandem_Repeat	657028	657073	60	+	.	.
scaffold1862	subtractBed	intrn	657641	658153	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_Kolobok-IS4	657641	658153	51	+	.	.
scaffold1862	subtractBed	intrn	657803	658153	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_IS4EU	657803	658153	56	+	.	.
scaffold1862	subtractBed	intrn	659197	659583	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_IS4EU	659197	659583	187	+	.	.
scaffold1862	subtractBed	intrn	659029	659691	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_Kolobok-IS4	659029	659691	173	+	.	.
scaffold1862	subtractBed	intrn	658552	658866	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_IS4EU	658552	658866	51	+	.	.
scaffold1862	subtractBed	intrn	658717	659691	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_IS4EU	658717	659691	141	+	.	.
scaffold1862	subtractBed	intrn	660073	661257	.	-	.	Parent=CGI_10021923;
	scaffold1862	WUBlastX	DNA_IS4EU	660073	661257	557	-	.	.
scaffold1862	subtractBed	intrn	682254	682294	.	-	.	Parent=CGI_10021924;
	scaffold1862	TRF	Tandem_Repeat	682254	682294	82	+	.	.
scaffold1863	subtractBed	intrn	71033	71149	.	-	.	Parent=CGI_10016679;
	scaffold1863	WUBlastX	DNA_TcMar-Marin	71033	71149	46	+	.	.
scaffold1863	subtractBed	intrn	84807	84843	.	-	.	Parent=CGI_10016682;
	scaffold1863	TRF	Tandem_Repeat	84807	84843	74	+	.	.
scaffold1863	subtractBed	intrn	100815	100910	.	+	.	Parent=CGI_10016684;
	scaffold1863	TRF	Tandem_Repeat	100815	100910	90	+	.	.
scaffold1863	subtractBed	intrn	109678	109894	.	+	.	Parent=CGI_10016684;
	scaffold1863	TRF	Tandem_Repeat	109678	109894	344	+	.	.
scaffold1863	subtractBed	intrn	114054	114088	.	+	.	Parent=CGI_10016684;
	scaffold1863	TRF	Tandem_Repeat	114054	114088	54	+	.	.
scaffold1863	subtractBed	intrn	121214	121252	.	+	.	Parent=CGI_10016684;
	scaffold1863	TRF	Tandem_Repeat	121214	121252	78	+	.	.
scaffold1863	subtractBed	intrn	258930	260093	.	-	.	Parent=CGI_10016692;
	scaffold1863	WUBlastX	DNA_hAT-hATw	258930	260093	113	+	.	.
scaffold1863	subtractBed	intrn	259152	260114	.	-	.	Parent=CGI_10016692;
	scaffold1863	WUBlastX	DNA_hAT-hATw	259152	260114	127	+	.	.
scaffold1863	subtractBed	intrn	258705	259100	.	-	.	Parent=CGI_10016692;
	scaffold1863	WUBlastX	DNA_hAT-hATw	258705	259100	112	+	.	.
scaffold1863	subtractBed	intrn	295026	295067	.	-	.	Parent=CGI_10016693;
	scaffold1863	TRF	Tandem_Repeat	295026	295067	75	+	.	.
scaffold1863	subtractBed	intrn	310583	310953	.	-	.	Parent=CGI_10016693;
	scaffold1863	TRF	Tandem_Repeat	310583	310953	412	+	.	.
scaffold1863	subtractBed	intrn	308872	309369	.	-	.	Parent=CGI_10016693;
	scaffold1863	WUBlastX	LINE_RTE-X	308872	309369	40	+	.	.
scaffold1863	subtractBed	intrn	309022	309237	.	-	.	Parent=CGI_10016693;
	scaffold1863	WUBlastX	LINE_RTE-X	309022	309237	105	+	.	.
scaffold1863	subtractBed	intrn	308920	309339	.	-	.	Parent=CGI_10016693;
	scaffold1863	WUBlastX	LINE_RTE-X	308920	309339	88	+	.	.
scaffold1863	subtractBed	intrn	325171	325425	.	-	.	Parent=CGI_10016694;
	scaffold1863	TRF	Tandem_Repeat	325171	325425	348	+	.	.
scaffold1863	subtractBed	intrn	325170	325560	.	-	.	Parent=CGI_10016694;
	scaffold1863	TRF	Tandem_Repeat	325170	325560	394	+	.	.
scaffold1863	subtractBed	intrn	325472	325557	.	-	.	Parent=CGI_10016694;
	scaffold1863	TRF	Tandem_Repeat	325472	325557	55	+	.	.
scaffold1863	subtractBed	intrn	335314	335369	.	-	.	Parent=CGI_10016694;
	scaffold1863	TRF	Tandem_Repeat	335314	335369	67	+	.	.
scaffold1863	subtractBed	intrn	335322	335369	.	-	.	Parent=CGI_10016694;
	scaffold1863	TRF	Tandem_Repeat	335322	335369	51	+	.	.
scaffold1863	subtractBed	intrn	349155	349241	.	-	.	Parent=CGI_10016695;
	scaffold1863	TRF	Tandem_Repeat	349155	349241	95	+	.	.
scaffold1863	subtractBed	intrn	349472	349639	.	-	.	Parent=CGI_10016695;
	scaffold1863	TRF	Tandem_Repeat	349472	349639	151	+	.	.
scaffold1863	subtractBed	intrn	362416	362449	.	-	.	Parent=CGI_10016695;
	scaffold1863	TRF	Tandem_Repeat	362416	362449	52	+	.	.
scaffold1863	subtractBed	intrn	372186	372270	.	+	.	Parent=CGI_10016696;
	scaffold1863	TRF	Tandem_Repeat	372186	372270	80	+	.	.
scaffold1863	subtractBed	intrn	372186	372259	.	+	.	Parent=CGI_10016696;
	scaffold1863	TRF	Tandem_Repeat	372186	372259	85	+	.	.
scaffold1863	subtractBed	intrn	372212	372258	.	+	.	Parent=CGI_10016696;
	scaffold1863	TRF	Tandem_Repeat	372212	372258	94	+	.	.
scaffold1863	subtractBed	intrn	372479	373117	.	+	.	Parent=CGI_10016696;
	scaffold1863	WUBlastX	DNA_Harbinger	372479	373117	91	+	.	.
scaffold1863	subtractBed	intrn	372276	372554	.	+	.	Parent=CGI_10016696;
	scaffold1863	WUBlastX	DNA_Harbinger	372276	372554	40	+	.	.
scaffold1863	subtractBed	intrn	372536	373066	.	+	.	Parent=CGI_10016696;
	scaffold1863	WUBlastX	DNA_Harbinger	372536	373066	239	+	.	.
scaffold1863	subtractBed	intrn	378938	378985	.	+	.	Parent=CGI_10016696;
	scaffold1863	TRF	Tandem_Repeat	378938	378985	80	+	.	.
scaffold1863	subtractBed	intrn	402538	402743	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	402538	402743	138	+	.	.
scaffold1863	subtractBed	intrn	402509	402743	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	402509	402743	308	+	.	.
scaffold1863	subtractBed	intrn	409039	409085	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	409039	409085	67	+	.	.
scaffold1863	subtractBed	intrn	409400	409434	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	409400	409434	70	+	.	.
scaffold1863	subtractBed	intrn	415964	417071	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	415964	417071	1062	+	.	.
scaffold1863	subtractBed	intrn	423856	424073	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	423856	424073	181	+	.	.
scaffold1863	subtractBed	intrn	423858	424074	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	423858	424074	265	+	.	.
scaffold1863	subtractBed	intrn	423856	424117	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	423856	424117	115	+	.	.
scaffold1863	subtractBed	intrn	424556	424928	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	424556	424928	255	+	.	.
scaffold1863	subtractBed	intrn	424556	424883	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	424556	424883	299	+	.	.
scaffold1863	subtractBed	intrn	424603	424928	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	424603	424928	263	+	.	.
scaffold1863	subtractBed	intrn	425122	425152	.	-	.	Parent=CGI_10016698;
	scaffold1863	TRF	Tandem_Repeat	425122	425152	62	+	.	.
scaffold1863	subtractBed	intrn	456559	456652	.	+	.	Parent=CGI_10016701;
	scaffold1863	TRF	Tandem_Repeat	456559	456652	102	+	.	.
scaffold1863	subtractBed	intrn	456670	456739	.	+	.	Parent=CGI_10016701;
	scaffold1863	TRF	Tandem_Repeat	456670	456739	54	+	.	.
scaffold1864	subtractBed	intrn	12856	12904	.	-	.	Parent=CGI_10004428;
	scaffold1864	TRF	Tandem_Repeat	12856	12904	62	+	.	.
scaffold1864	subtractBed	intrn	31014	31196	.	-	.	Parent=CGI_10004430;
	scaffold1864	WUBlastX	LINE_RTE-X	31014	31196	32	-	.	.
scaffold1864	subtractBed	intrn	44940	44975	.	+	.	Parent=CGI_10004431;
	scaffold1864	TRF	Tandem_Repeat	44940	44975	54	+	.	.
scaffold1864	subtractBed	intrn	80220	80270	.	-	.	Parent=CGI_10004433;
	scaffold1864	TRF	Tandem_Repeat	80220	80270	102	+	.	.
scaffold1865	subtractBed	intrn	124613	124829	.	+	.	Parent=CGI_10013535;
	scaffold1865	TRF	Tandem_Repeat	124613	124829	254	+	.	.
scaffold1865	subtractBed	intrn	124613	124829	.	+	.	Parent=CGI_10013535;
	scaffold1865	TRF	Tandem_Repeat	124613	124829	245	+	.	.
scaffold1865	subtractBed	intrn	125474	125861	.	+	.	Parent=CGI_10013535;
	scaffold1865	TRF	Tandem_Repeat	125474	125861	436	+	.	.
scaffold1865	subtractBed	intrn	125474	125861	.	+	.	Parent=CGI_10013535;
	scaffold1865	TRF	Tandem_Repeat	125474	125861	564	+	.	.
scaffold1865	subtractBed	intrn	135238	135513	.	+	.	Parent=CGI_10013535;
	scaffold1865	WUBlastX	DNA_TcMar-Tc1	135238	135513	36	-	.	.
scaffold1865	subtractBed	intrn	134537	135226	.	+	.	Parent=CGI_10013535;
	scaffold1865	WUBlastX	DNA_TcMar-Tc1	134537	135226	381	-	.	.
scaffold1865	subtractBed	intrn	165869	165955	.	-	.	Parent=CGI_10013536;
	scaffold1865	TRF	Tandem_Repeat	165869	165955	72	+	.	.
scaffold1865	subtractBed	intrn	226195	226230	.	-	.	Parent=CGI_10013544;
	scaffold1865	TRF	Tandem_Repeat	226195	226230	72	+	.	.
scaffold1865	subtractBed	intrn	236945	237124	.	-	.	Parent=CGI_10013544;
	scaffold1865	WUBlastX	LINE_L1-Tx1	236945	237124	31	-	.	.
scaffold1865	subtractBed	intrn	275076	276147	.	-	.	Parent=CGI_10013547;
	scaffold1865	TRF	Tandem_Repeat	275076	276147	1704	+	.	.
scaffold1865	subtractBed	intrn	274539	276147	.	-	.	Parent=CGI_10013547;
	scaffold1865	TRF	Tandem_Repeat	274539	276147	2089	+	.	.
scaffold1865	subtractBed	intrn	282097	282166	.	-	.	Parent=CGI_10013547;
	scaffold1865	TRF	Tandem_Repeat	282097	282166	70	+	.	.
scaffold1865	subtractBed	intrn	282097	282154	.	-	.	Parent=CGI_10013547;
	scaffold1865	TRF	Tandem_Repeat	282097	282154	62	+	.	.
scaffold1865	subtractBed	intrn	293572	293640	.	-	.	Parent=CGI_10013547;
	scaffold1865	WUBlastX	LINE_RTE-X	293572	293640	32	+	.	.
scaffold1865	subtractBed	intrn	293053	293616	.	-	.	Parent=CGI_10013547;
	scaffold1865	WUBlastX	LINE_RTE-X	293053	293616	67	+	.	.
scaffold1865	subtractBed	intrn	291986	292576	.	-	.	Parent=CGI_10013547;
	scaffold1865	WUBlastX	LINE_RTE-X	291986	292576	142	+	.	.
scaffold1865	subtractBed	intrn	291888	292267	.	-	.	Parent=CGI_10013547;
	scaffold1865	WUBlastX	LINE_Proto2	291884	292267	32	+	.	.
scaffold1865	subtractBed	intrn	332773	332821	.	-	.	Parent=CGI_10013548;
	scaffold1865	TRF	Tandem_Repeat	332773	332821	98	+	.	.
scaffold1865	subtractBed	intrn	339042	339070	.	-	.	Parent=CGI_10013549;
	scaffold1865	TRF	Tandem_Repeat	339042	339070	58	+	.	.
scaffold1865	subtractBed	intrn	351580	351628	.	+	.	Parent=CGI_10013550;
	scaffold1865	TRF	Tandem_Repeat	351580	351628	98	+	.	.
scaffold1865	subtractBed	intrn	354202	354264	.	+	.	Parent=CGI_10013550;
	scaffold1865	TRF	Tandem_Repeat	354202	354264	81	+	.	.
scaffold1865	subtractBed	intrn	356036	356281	.	+	.	Parent=CGI_10013550;
	scaffold1865	WUBlastX	LINE_CR1-L2	356036	356281	39	-	.	.
scaffold1865	subtractBed	intrn	355701	356030	.	+	.	Parent=CGI_10013550;
	scaffold1865	WUBlastX	LINE_L2	355701	356030	56	-	.	.
scaffold1866	subtractBed	intrn	16769	16798	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	16769	16798	51	+	.	.
scaffold1866	subtractBed	intrn	16769	16832	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	16769	16832	74	+	.	.
scaffold1866	subtractBed	intrn	16788	16832	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	16788	16832	63	+	.	.
scaffold1866	subtractBed	intrn	17022	17051	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	17022	17051	60	+	.	.
scaffold1866	subtractBed	intrn	32860	33524	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	32860	33545	1088	+	.	.
scaffold1866	subtractBed	intrn	45851	47124	.	-	.	Parent=CGI_10017902;
	scaffold1866	TRF	Tandem_Repeat	45851	47124	1515	+	.	.
scaffold1866	subtractBed	intrn	102568	102618	.	+	.	Parent=CGI_10017905;
	scaffold1866	TRF	Tandem_Repeat	102568	102618	84	+	.	.
scaffold1866	subtractBed	intrn	102629	103465	.	+	.	Parent=CGI_10017905;
	scaffold1866	TRF	Tandem_Repeat	102629	103465	1096	+	.	.
scaffold1866	subtractBed	intrn	110836	110869	.	+	.	Parent=CGI_10017906;
	scaffold1866	TRF	Tandem_Repeat	110836	110869	68	+	.	.
scaffold1866	subtractBed	intrn	207955	208003	.	-	.	Parent=CGI_10017910;
	scaffold1866	TRF	Tandem_Repeat	207955	208003	98	+	.	.
scaffold1866	subtractBed	intrn	204700	204792	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1	204700	204792	20	+	.	.
scaffold1866	subtractBed	intrn	206893	207615	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1-L2	206893	207615	66	+	.	.
scaffold1866	subtractBed	intrn	206085	206840	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1-L2	206085	206840	175	+	.	.
scaffold1866	subtractBed	intrn	207088	207774	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1-L2	207088	207774	133	+	.	.
scaffold1866	subtractBed	intrn	204724	204993	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_L2	204724	204993	52	+	.	.
scaffold1866	subtractBed	intrn	204721	204900	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_L2	204721	204900	73	+	.	.
scaffold1866	subtractBed	intrn	205960	206106	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1	205960	206106	34	+	.	.
scaffold1866	subtractBed	intrn	205703	205906	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1-L2	205703	205906	31	+	.	.
scaffold1866	subtractBed	intrn	206409	206852	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_CR1-L2	206409	206852	203	+	.	.
scaffold1866	subtractBed	intrn	204724	204933	.	-	.	Parent=CGI_10017910;
	scaffold1866	WUBlastX	LINE_L2	204724	204933	54	+	.	.
scaffold1866	subtractBed	intrn	225419	225451	.	-	.	Parent=CGI_10017911;
	scaffold1866	TRF	Tandem_Repeat	225419	225451	66	+	.	.
scaffold1866	subtractBed	intrn	225114	225218	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1	225114	225218	29	+	.	.
scaffold1866	subtractBed	intrn	223802	223885	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_Rex-Babar	223802	223885	27	+	.	.
scaffold1866	subtractBed	intrn	222811	223035	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	222811	223035	34	+	.	.
scaffold1866	subtractBed	intrn	224171	224557	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1-L2	224171	224557	158	+	.	.
scaffold1866	subtractBed	intrn	222865	223134	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	222865	223134	52	+	.	.
scaffold1866	subtractBed	intrn	224943	225191	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1-L2	224943	225191	86	+	.	.
scaffold1866	subtractBed	intrn	223858	224175	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1	223858	224175	40	+	.	.
scaffold1866	subtractBed	intrn	224267	224557	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1-L2	224267	224557	172	+	.	.
scaffold1866	subtractBed	intrn	223470	223682	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1-L2	223470	223682	47	+	.	.
scaffold1866	subtractBed	intrn	223509	223724	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	223509	223724	24	+	.	.
scaffold1866	subtractBed	intrn	222862	223041	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	222862	223041	80	+	.	.
scaffold1866	subtractBed	intrn	224279	224623	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_I	224279	224623	59	+	.	.
scaffold1866	subtractBed	intrn	222850	223080	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	222850	223080	63	+	.	.
scaffold1866	subtractBed	intrn	224610	225188	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	224610	225188	64	+	.	.
scaffold1866	subtractBed	intrn	221135	221407	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_L2	221135	221407	42	-	.	.
scaffold1866	subtractBed	intrn	221201	221419	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1-L2	221201	221419	133	-	.	.
scaffold1866	subtractBed	intrn	223930	224184	.	-	.	Parent=CGI_10017911;
	scaffold1866	WUBlastX	LINE_CR1	223930	224184	64	+	.	.
scaffold1866	subtractBed	intrn	247420	247743	.	-	.	Parent=CGI_10017912;
	scaffold1866	WUBlastX	LINE_CR1-L2	247420	247743	118	-	.	.
scaffold1866	subtractBed	intrn	247196	247471	.	-	.	Parent=CGI_10017912;
	scaffold1866	WUBlastX	LINE_CR1-L2	247196	247471	94	-	.	.
scaffold1866	subtractBed	intrn	247746	248012	.	-	.	Parent=CGI_10017912;
	scaffold1866	WUBlastX	LINE_CR1-L2	247746	248012	117	-	.	.
scaffold1866	subtractBed	intrn	394916	394969	.	-	.	Parent=CGI_10017921;
	scaffold1866	TRF	Tandem_Repeat	394916	394969	108	+	.	.
scaffold1866	subtractBed	intrn	439237	439271	.	-	.	Parent=CGI_10017924;
	scaffold1866	TRF	Tandem_Repeat	439237	439271	70	+	.	.
scaffold1866	subtractBed	intrn	453663	453721	.	+	.	Parent=CGI_10017926;
	scaffold1866	TRF	Tandem_Repeat	453663	453721	118	+	.	.
scaffold1866	subtractBed	intrn	516108	516260	.	-	.	Parent=CGI_10017928;
	scaffold1866	TRF	Tandem_Repeat	516108	516260	234	+	.	.
scaffold1866	subtractBed	intrn	518377	518407	.	-	.	Parent=CGI_10017928;
	scaffold1866	TRF	Tandem_Repeat	518377	518407	62	+	.	.
scaffold1866	subtractBed	intrn	518407	518446	.	-	.	Parent=CGI_10017928;
	scaffold1866	TRF	Tandem_Repeat	518407	518446	80	+	.	.
scaffold1866	subtractBed	intrn	518556	518641	.	-	.	Parent=CGI_10017928;
	scaffold1866	TRF	Tandem_Repeat	518556	518641	136	+	.	.
scaffold1866	subtractBed	intrn	519292	519327	.	-	.	Parent=CGI_10017928;
	scaffold1866	TRF	Tandem_Repeat	519292	519327	72	+	.	.
scaffold1867	subtractBed	intrn	23584	23625	.	-	.	Parent=CGI_10006442;
	scaffold1867	TRF	Tandem_Repeat	23584	23625	84	+	.	.
scaffold1867	subtractBed	intrn	52432	53503	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	52432	53503	1307	+	.	.
scaffold1867	subtractBed	intrn	52432	53503	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	52432	53503	1451	+	.	.
scaffold1867	subtractBed	intrn	54031	54358	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	54031	54358	512	+	.	.
scaffold1867	subtractBed	intrn	60234	60296	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	60234	60296	126	+	.	.
scaffold1867	subtractBed	intrn	73390	73421	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	73390	73421	64	+	.	.
scaffold1867	subtractBed	intrn	75512	75592	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	75512	75592	162	+	.	.
scaffold1867	subtractBed	intrn	77484	77516	.	-	.	Parent=CGI_10006445;
	scaffold1867	TRF	Tandem_Repeat	77484	77516	66	+	.	.
scaffold1867	subtractBed	intrn	103225	103316	.	+	.	Parent=CGI_10006446;
	scaffold1867	TRF	Tandem_Repeat	103225	103316	112	+	.	.
scaffold1867	subtractBed	intrn	105219	105260	.	+	.	Parent=CGI_10006446;
	scaffold1867	WUBlastX	DNA_Kolobok-Hyd	105219	105260	30	+	.	.
scaffold1867	subtractBed	intrn	105528	106283	.	+	.	Parent=CGI_10006446;
	scaffold1867	WUBlastX	DNA_Kolobok-Hyd	105528	106283	84	+	.	.
scaffold1867	subtractBed	intrn	106707	106715	.	+	.	Parent=CGI_10006446;
	scaffold1867	WUBlastX	DNA_Kolobok-Hyd	106707	106868	21	+	.	.
scaffold1868	subtractBed	intrn	4297	4328	.	+	.	Parent=CGI_10007980;
	scaffold1868	TRF	Tandem_Repeat	4297	4328	64	+	.	.
scaffold1868	subtractBed	intrn	4805	4837	.	+	.	Parent=CGI_10007980;
	scaffold1868	TRF	Tandem_Repeat	4805	4837	66	+	.	.
scaffold1868	subtractBed	intrn	11216	11241	.	+	.	Parent=CGI_10007980;
	scaffold1868	TRF	Tandem_Repeat	11216	11241	52	+	.	.
scaffold1868	subtractBed	intrn	37404	37550	.	+	.	Parent=CGI_10007981;
	scaffold1868	TRF	Tandem_Repeat	37404	37550	114	+	.	.
scaffold1868	subtractBed	intrn	40736	40767	.	+	.	Parent=CGI_10007981;
	scaffold1868	TRF	Tandem_Repeat	40736	40767	64	+	.	.
scaffold1868	subtractBed	intrn	44882	44920	.	+	.	Parent=CGI_10007981;
	scaffold1868	TRF	Tandem_Repeat	44882	44920	78	+	.	.
scaffold1868	subtractBed	intrn	169431	169607	.	-	.	Parent=CGI_10007985;
	scaffold1868	WUBlastX	LINE_RTE-X	169431	169607	25	+	.	.
scaffold1868	subtractBed	intrn	168900	169007	.	-	.	Parent=CGI_10007985;
	scaffold1868	WUBlastX	LINE_RTE-X	168900	169007	44	+	.	.
scaffold1868	subtractBed	intrn	169015	169434	.	-	.	Parent=CGI_10007985;
	scaffold1868	WUBlastX	LINE_RTE-X	169015	169434	38	+	.	.
scaffold1868	subtractBed	intrn	168873	168995	.	-	.	Parent=CGI_10007985;
	scaffold1868	WUBlastX	LINE_RTE-X	168873	168995	42	+	.	.
scaffold1868	subtractBed	intrn	173056	173179	.	-	.	Parent=CGI_10007985;
	scaffold1868	TRF	Tandem_Repeat	173056	173179	214	+	.	.
scaffold1868	subtractBed	intrn	173441	173499	.	-	.	Parent=CGI_10007985;
	scaffold1868	TRF	Tandem_Repeat	173441	173499	118	+	.	.
scaffold1869	subtractBed	intrn	5311	6664	.	+	.	Parent=CGI_10009010;
	scaffold1869	TRF	Tandem_Repeat	5311	6664	1986	+	.	.
scaffold1869	subtractBed	intrn	7316	7615	.	+	.	Parent=CGI_10009010;
	scaffold1869	TRF	Tandem_Repeat	7316	7615	449	+	.	.
scaffold1869	subtractBed	intrn	7319	7653	.	+	.	Parent=CGI_10009010;
	scaffold1869	TRF	Tandem_Repeat	7319	7653	410	+	.	.
scaffold1869	subtractBed	intrn	14903	15080	.	-	.	Parent=CGI_10009011;
	scaffold1869	TRF	Tandem_Repeat	14903	15080	259	+	.	.
scaffold1869	subtractBed	intrn	15493	15843	.	-	.	Parent=CGI_10009011;
	scaffold1869	WUBlastX	DNA_Sola	15493	15843	122	+	.	.
scaffold1869	subtractBed	intrn	15544	15834	.	-	.	Parent=CGI_10009011;
	scaffold1869	WUBlastX	DNA_Sola	15544	15834	122	+	.	.
scaffold1869	subtractBed	intrn	15890	15991	.	-	.	Parent=CGI_10009011;
	scaffold1869	WUBlastX	DNA_Sola	15890	15991	22	+	.	.
scaffold1869	subtractBed	intrn	15390	15530	.	-	.	Parent=CGI_10009011;
	scaffold1869	WUBlastX	DNA_Sola	15390	15530	75	+	.	.
scaffold1869	subtractBed	intrn	17307	17842	.	-	.	Parent=CGI_10009011;
	scaffold1869	TRF	Tandem_Repeat	17307	17842	822	+	.	.
scaffold1869	subtractBed	intrn	27949	28281	.	-	.	Parent=CGI_10009011;
	scaffold1869	TRF	Tandem_Repeat	27949	28281	485	+	.	.
scaffold1869	subtractBed	intrn	14903	15080	.	+	.	Parent=CGI_10009012;
	scaffold1869	TRF	Tandem_Repeat	14903	15080	259	+	.	.
scaffold1869	subtractBed	intrn	15493	15843	.	+	.	Parent=CGI_10009012;
	scaffold1869	WUBlastX	DNA_Sola	15493	15843	122	+	.	.
scaffold1869	subtractBed	intrn	15544	15834	.	+	.	Parent=CGI_10009012;
	scaffold1869	WUBlastX	DNA_Sola	15544	15834	122	+	.	.
scaffold1869	subtractBed	intrn	15890	15991	.	+	.	Parent=CGI_10009012;
	scaffold1869	WUBlastX	DNA_Sola	15890	15991	22	+	.	.
scaffold1869	subtractBed	intrn	15390	15530	.	+	.	Parent=CGI_10009012;
	scaffold1869	WUBlastX	DNA_Sola	15390	15530	75	+	.	.
scaffold1869	subtractBed	intrn	79109	79320	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	79109	79320	248	+	.	.
scaffold1869	subtractBed	intrn	79994	80471	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	79994	80471	695	+	.	.
scaffold1869	subtractBed	intrn	81095	81404	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	81095	81404	346	+	.	.
scaffold1869	subtractBed	intrn	81119	81305	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	81119	81305	182	+	.	.
scaffold1869	subtractBed	intrn	81098	81383	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	81098	81383	518	+	.	.
scaffold1869	subtractBed	intrn	81176	81423	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	81176	81423	227	+	.	.
scaffold1869	subtractBed	intrn	81100	81427	.	+	.	Parent=CGI_10009015;
	scaffold1869	TRF	Tandem_Repeat	81100	81427	363	+	.	.
scaffold1869	subtractBed	intrn	193385	193420	.	-	.	Parent=CGI_10009023;
	scaffold1869	TRF	Tandem_Repeat	193385	193420	72	+	.	.
scaffold1869	subtractBed	intrn	193385	193420	.	+	.	Parent=CGI_10009024;
	scaffold1869	TRF	Tandem_Repeat	193385	193420	72	+	.	.
scaffold1869	subtractBed	intrn	203876	203907	.	-	.	Parent=CGI_10009025;
	scaffold1869	TRF	Tandem_Repeat	203876	203907	64	+	.	.
scaffold1869	subtractBed	intrn	205873	206334	.	-	.	Parent=CGI_10009025;
	scaffold1869	WUBlastX	LINE_L1-Tx1	205873	206334	123	-	.	.
scaffold1869	subtractBed	intrn	205852	206475	.	-	.	Parent=CGI_10009025;
	scaffold1869	WUBlastX	LINE_L1-Tx1	205852	206475	69	-	.	.
scaffold1870	subtractBed	intrn	90233	90271	.	+	.	Parent=CGI_10013181;
	scaffold1870	TRF	Tandem_Repeat	90233	90271	60	+	.	.
scaffold1870	subtractBed	intrn	90342	90366	.	+	.	Parent=CGI_10013181;
	scaffold1870	TRF	Tandem_Repeat	90342	90366	50	+	.	.
scaffold1870	subtractBed	intrn	92643	93045	.	+	.	Parent=CGI_10013181;
	scaffold1870	TRF	Tandem_Repeat	92643	93045	572	+	.	.
scaffold1870	subtractBed	intrn	97026	97250	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_L1	97026	97520	22	-	.	.
scaffold1870	subtractBed	intrn	98218	98338	.	-	.	Parent=CGI_10013182;
	scaffold1870	TRF	Tandem_Repeat	98218	98338	138	+	.	.
scaffold1870	subtractBed	intrn	110284	110415	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_RTE-X	110284	110415	57	+	.	.
scaffold1870	subtractBed	intrn	110302	110475	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_RTE-X	110302	110475	28	+	.	.
scaffold1870	subtractBed	intrn	109821	110237	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_RTE-X	109821	110237	55	+	.	.
scaffold1870	subtractBed	intrn	109683	110138	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_RTE-X	109683	110138	79	+	.	.
scaffold1870	subtractBed	intrn	106335	106598	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_L1-Tx1	106335	106598	22	-	.	.
scaffold1870	subtractBed	intrn	108535	108690	.	-	.	Parent=CGI_10013182;
	scaffold1870	WUBlastX	LINE_RTE-X	108535	108690	20	+	.	.
scaffold1870	subtractBed	intrn	126146	126202	.	+	.	Parent=CGI_10013183;
	scaffold1870	TRF	Tandem_Repeat	126146	126202	107	+	.	.
scaffold1870	subtractBed	intrn	128288	128748	.	+	.	Parent=CGI_10013183;
	scaffold1870	TRF	Tandem_Repeat	128288	128748	537	+	.	.
scaffold1870	subtractBed	intrn	130101	130371	.	+	.	Parent=CGI_10013183;
	scaffold1870	TRF	Tandem_Repeat	130101	130371	436	+	.	.
scaffold1870	subtractBed	intrn	131673	132041	.	+	.	Parent=CGI_10013183;
	scaffold1870	TRF	Tandem_Repeat	131673	132041	616	+	.	.
scaffold1870	subtractBed	intrn	161576	161607	.	-	.	Parent=CGI_10013184;
	scaffold1870	TRF	Tandem_Repeat	161576	161607	64	+	.	.
scaffold1870	subtractBed	intrn	183696	183749	.	-	.	Parent=CGI_10013185;
	scaffold1870	TRF	Tandem_Repeat	183696	183749	108	+	.	.
scaffold1870	subtractBed	intrn	211958	211998	.	+	.	Parent=CGI_10013186;
	scaffold1870	TRF	Tandem_Repeat	211958	211998	82	+	.	.
scaffold1870	subtractBed	intrn	213920	213970	.	+	.	Parent=CGI_10013186;
	scaffold1870	TRF	Tandem_Repeat	213920	213970	93	+	.	.
scaffold1870	subtractBed	intrn	225803	225942	.	+	.	Parent=CGI_10013186;
	scaffold1870	TRF	Tandem_Repeat	225803	225942	271	+	.	.
scaffold1870	subtractBed	intrn	247074	247499	.	-	.	Parent=CGI_10013187;
	scaffold1870	TRF	Tandem_Repeat	247074	247499	647	+	.	.
scaffold1870	subtractBed	intrn	250666	250917	.	+	.	Parent=CGI_10013188;
	scaffold1870	TRF	Tandem_Repeat	250666	250917	164	+	.	.
scaffold1870	subtractBed	intrn	250720	250921	.	+	.	Parent=CGI_10013188;
	scaffold1870	TRF	Tandem_Repeat	250720	250921	154	+	.	.
scaffold1870	subtractBed	intrn	254960	255282	.	-	.	Parent=CGI_10013189;
	scaffold1870	TRF	Tandem_Repeat	254960	255282	407	+	.	.
scaffold1870	subtractBed	intrn	257204	257249	.	-	.	Parent=CGI_10013189;
	scaffold1870	TRF	Tandem_Repeat	257204	257249	92	+	.	.
scaffold1870	subtractBed	intrn	264788	264915	.	-	.	Parent=CGI_10013190;
	scaffold1870	TRF	Tandem_Repeat	264788	264915	76	+	.	.
scaffold1870	subtractBed	intrn	316025	316155	.	-	.	Parent=CGI_10013191;
	scaffold1870	TRF	Tandem_Repeat	316025	316170	222	+	.	.
scaffold1871	subtractBed	intrn	5331	5360	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	5331	5360	60	+	.	.
scaffold1871	subtractBed	intrn	9186	9226	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	9186	9226	82	+	.	.
scaffold1871	subtractBed	intrn	15324	15382	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	15324	15382	102	+	.	.
scaffold1871	subtractBed	intrn	37395	38009	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	37395	38009	575	+	.	.
scaffold1871	subtractBed	intrn	37587	38009	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	37587	38009	328	+	.	.
scaffold1871	subtractBed	intrn	37417	38006	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	37417	38006	294	+	.	.
scaffold1871	subtractBed	intrn	38022	38376	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	38022	38376	240	+	.	.
scaffold1871	subtractBed	intrn	38122	38376	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	38122	38376	214	+	.	.
scaffold1871	subtractBed	intrn	38006	38376	.	-	.	Parent=CGI_10007352;
	scaffold1871	TRF	Tandem_Repeat	38006	38376	271	+	.	.
scaffold1871	subtractBed	intrn	48758	48790	.	-	.	Parent=CGI_10007353;
	scaffold1871	TRF	Tandem_Repeat	48758	48790	66	+	.	.
scaffold1871	subtractBed	intrn	62580	62629	.	+	.	Parent=CGI_10007354;
	scaffold1871	TRF	Tandem_Repeat	62580	62629	91	+	.	.
scaffold1871	subtractBed	intrn	74316	74552	.	+	.	Parent=CGI_10007354;
	scaffold1871	TRF	Tandem_Repeat	74316	74552	402	+	.	.
scaffold1871	subtractBed	intrn	84116	84176	.	+	.	Parent=CGI_10007354;
	scaffold1871	TRF	Tandem_Repeat	84116	84176	104	+	.	.
scaffold1871	subtractBed	intrn	119269	119365	.	+	.	Parent=CGI_10007357;
	scaffold1871	TRF	Tandem_Repeat	119269	119365	106	+	.	.
scaffold1871	subtractBed	intrn	160696	160730	.	-	.	Parent=CGI_10007359;
	scaffold1871	TRF	Tandem_Repeat	160696	160730	70	+	.	.
scaffold1872	subtractBed	intrn	36109	36177	.	+	.	Parent=CGI_10007181;
	scaffold1872	TRF	Tandem_Repeat	36109	36177	56	+	.	.
scaffold1872	subtractBed	intrn	41770	42007	.	+	.	Parent=CGI_10007181;
	scaffold1872	TRF	Tandem_Repeat	41770	42007	146	+	.	.
scaffold1872	subtractBed	intrn	51968	52305	.	-	.	Parent=CGI_10007182;
	scaffold1872	TRF	Tandem_Repeat	51968	52305	257	+	.	.
scaffold1872	subtractBed	intrn	52053	52462	.	-	.	Parent=CGI_10007182;
	scaffold1872	TRF	Tandem_Repeat	52053	52462	222	+	.	.
scaffold1872	subtractBed	intrn	85425	86331	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	85425	86331	940	+	.	.
scaffold1872	subtractBed	intrn	87627	87666	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	87627	87666	62	+	.	.
scaffold1872	subtractBed	intrn	89560	89857	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	89560	89857	207	+	.	.
scaffold1872	subtractBed	intrn	89651	89867	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	89651	89867	226	+	.	.
scaffold1872	subtractBed	intrn	92139	92189	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	92139	92189	102	+	.	.
scaffold1872	subtractBed	intrn	97596	98108	.	+	.	Parent=CGI_10007184;
	scaffold1872	WUBlastX	LINE_RTE-X	97596	98108	41	-	.	.
scaffold1872	subtractBed	intrn	97629	97961	.	+	.	Parent=CGI_10007184;
	scaffold1872	WUBlastX	LINE_RTE-X	97629	97961	99	-	.	.
scaffold1872	subtractBed	intrn	101176	101206	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	101176	101206	62	+	.	.
scaffold1872	subtractBed	intrn	109485	109927	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	109485	109927	583	+	.	.
scaffold1872	subtractBed	intrn	109485	109927	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	109485	109927	590	+	.	.
scaffold1872	subtractBed	intrn	113121	113232	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	113121	113232	122	+	.	.
scaffold1872	subtractBed	intrn	113121	113232	.	+	.	Parent=CGI_10007184;
	scaffold1872	TRF	Tandem_Repeat	113121	113232	142	+	.	.
scaffold1872	subtractBed	intrn	117786	117823	.	-	.	Parent=CGI_10007185;
	scaffold1872	TRF	Tandem_Repeat	117786	117823	76	+	.	.
scaffold1872	subtractBed	intrn	134956	134994	.	-	.	Parent=CGI_10007186;
	scaffold1872	TRF	Tandem_Repeat	134956	134994	78	+	.	.
scaffold1872	subtractBed	intrn	160571	160644	.	+	.	Parent=CGI_10007188;
	scaffold1872	TRF	Tandem_Repeat	160571	160644	121	+	.	.
scaffold1872	subtractBed	intrn	162515	162629	.	+	.	Parent=CGI_10007188;
	scaffold1872	TRF	Tandem_Repeat	162515	162629	69	+	.	.
scaffold1873	subtractBed	intrn	50957	50981	.	+	.	Parent=CGI_10009291;
	scaffold1873	TRF	Tandem_Repeat	50957	50981	50	+	.	.
scaffold1873	subtractBed	intrn	56072	56575	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	56072	56575	196	-	.	.
scaffold1873	subtractBed	intrn	58839	58892	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	DNA_Helitron	58839	58892	20	-	.	.
scaffold1873	subtractBed	intrn	64736	64792	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	LINE_L1-Tx1	64736	64792	28	+	.	.
scaffold1873	subtractBed	intrn	64771	65220	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	LINE_L1-Tx1	64771	65220	103	+	.	.
scaffold1873	subtractBed	intrn	64858	65385	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	LINE_L1-Tx1	64858	65385	198	+	.	.
scaffold1873	subtractBed	intrn	54964	55191	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	54964	55191	59	-	.	.
scaffold1873	subtractBed	intrn	55187	56488	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	55187	56488	785	-	.	.
scaffold1873	subtractBed	intrn	56649	57350	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	56649	57350	276	-	.	.
scaffold1873	subtractBed	intrn	57353	58015	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	57353	58015	437	-	.	.
scaffold1873	subtractBed	intrn	57947	58579	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	RC_Helitron	57947	58579	312	-	.	.
scaffold1873	subtractBed	intrn	54381	54941	.	+	.	Parent=CGI_10009291;
	scaffold1873	WUBlastX	LINE_L2	54381	54941	26	-	.	.
scaffold1873	subtractBed	intrn	71983	72069	.	+	.	Parent=CGI_10009292;
	scaffold1873	TRF	Tandem_Repeat	71983	72069	111	+	.	.
scaffold1873	subtractBed	intrn	71996	72098	.	+	.	Parent=CGI_10009292;
	scaffold1873	TRF	Tandem_Repeat	71996	72098	84	+	.	.
scaffold1873	subtractBed	intrn	72470	72508	.	+	.	Parent=CGI_10009292;
	scaffold1873	TRF	Tandem_Repeat	72470	72508	78	+	.	.
scaffold1873	subtractBed	intrn	72815	73003	.	+	.	Parent=CGI_10009292;
	scaffold1873	WUBlastX	LINE_L1-Tx1	72815	73003	58	-	.	.
scaffold1873	subtractBed	intrn	179460	179558	.	+	.	Parent=CGI_10009300;
	scaffold1873	WUBlastX	LINE_RTE-X	179460	179558	29	-	.	.
scaffold1873	subtractBed	intrn	179249	179443	.	+	.	Parent=CGI_10009300;
	scaffold1873	WUBlastX	LINE_RTE-X	179249	179443	45	-	.	.
scaffold1873	subtractBed	intrn	184159	184219	.	+	.	Parent=CGI_10009300;
	scaffold1873	TRF	Tandem_Repeat	184159	184219	122	+	.	.
scaffold1874	subtractBed	intrn	2403	2748	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	2403	2748	629	+	.	.
scaffold1874	subtractBed	intrn	4300	4528	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	4300	4528	422	+	.	.
scaffold1874	subtractBed	intrn	9418	9758	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	9418	9758	150	+	.	.
scaffold1874	subtractBed	intrn	9853	10017	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	9853	10017	106	+	.	.
scaffold1874	subtractBed	intrn	11296	11437	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	11296	11437	239	+	.	.
scaffold1874	subtractBed	intrn	13195	13319	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	13195	13319	153	+	.	.
scaffold1874	subtractBed	intrn	13866	13993	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	13866	13993	91	+	.	.
scaffold1874	subtractBed	intrn	16531	17025	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	16527	17025	353	+	.	.
scaffold1874	subtractBed	intrn	16609	16874	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	16609	16874	433	+	.	.
scaffold1874	subtractBed	intrn	21014	21622	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	21014	21622	575	+	.	.
scaffold1874	subtractBed	intrn	23706	23788	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	23706	23788	148	+	.	.
scaffold1874	subtractBed	intrn	24398	24558	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	24398	24558	250	+	.	.
scaffold1874	subtractBed	intrn	24567	24757	.	-	.	Parent=CGI_10011917;
	scaffold1874	TRF	Tandem_Repeat	24567	24757	231	+	.	.
scaffold1874	subtractBed	intrn	28893	29100	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	28893	29100	93	+	.	.
scaffold1874	subtractBed	intrn	28963	29490	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	28963	29490	819	+	.	.
scaffold1874	subtractBed	intrn	29480	29584	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	29480	29584	70	+	.	.
scaffold1874	subtractBed	intrn	29490	29690	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	29490	29694	311	+	.	.
scaffold1874	subtractBed	intrn	30008	30230	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	30008	30230	365	+	.	.
scaffold1874	subtractBed	intrn	30733	31140	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	30733	31140	283	+	.	.
scaffold1874	subtractBed	intrn	30707	31127	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	30707	31127	133	+	.	.
scaffold1874	subtractBed	intrn	30697	31148	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	30697	31148	705	+	.	.
scaffold1874	subtractBed	intrn	31038	31111	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	31038	31111	63	+	.	.
scaffold1874	subtractBed	intrn	32836	32896	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	32836	32896	122	+	.	.
scaffold1874	subtractBed	intrn	34126	34216	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	34120	34216	135	+	.	.
scaffold1874	subtractBed	intrn	34252	34373	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	34252	34373	109	+	.	.
scaffold1874	subtractBed	intrn	35457	36090	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	35442	36090	745	+	.	.
scaffold1874	subtractBed	intrn	35457	36090	.	+	.	Parent=CGI_10011918;
	scaffold1874	TRF	Tandem_Repeat	35442	36090	678	+	.	.
scaffold1874	subtractBed	intrn	48890	49019	.	-	.	Parent=CGI_10011919;
	scaffold1874	TRF	Tandem_Repeat	48890	49019	233	+	.	.
scaffold1874	subtractBed	intrn	49939	49993	.	-	.	Parent=CGI_10011919;
	scaffold1874	TRF	Tandem_Repeat	49939	49993	110	+	.	.
scaffold1874	subtractBed	intrn	69714	70532	.	+	.	Parent=CGI_10011920;
	scaffold1874	TRF	Tandem_Repeat	69662	70532	1403	+	.	.
scaffold1874	subtractBed	intrn	70954	71093	.	+	.	Parent=CGI_10011920;
	scaffold1874	TRF	Tandem_Repeat	70954	71093	208	+	.	.
scaffold1874	subtractBed	intrn	75168	78048	.	+	.	Parent=CGI_10011921;
	scaffold1874	TRF	Tandem_Repeat	74743	78048	4142	+	.	.
scaffold1874	subtractBed	intrn	75168	78048	.	+	.	Parent=CGI_10011921;
	scaffold1874	TRF	Tandem_Repeat	74746	78048	4163	+	.	.
scaffold1874	subtractBed	intrn	82177	82442	.	+	.	Parent=CGI_10011921;
	scaffold1874	TRF	Tandem_Repeat	82177	82442	397	+	.	.
scaffold1874	subtractBed	intrn	118455	118456	.	-	.	Parent=CGI_10011923;
	scaffold1874	WUBlastX	LINE_L1	118455	118859	46	-	.	.
scaffold1874	subtractBed	intrn	127401	128478	.	+	.	Parent=CGI_10011924;
	scaffold1874	TRF	Tandem_Repeat	127401	128478	1525	+	.	.
scaffold1874	subtractBed	intrn	238306	239485	.	-	.	Parent=CGI_10011932;
	scaffold1874	TRF	Tandem_Repeat	238306	239485	1592	+	.	.
scaffold1874	subtractBed	intrn	241789	241863	.	-	.	Parent=CGI_10011932;
	scaffold1874	TRF	Tandem_Repeat	241789	241863	141	+	.	.
scaffold1874	subtractBed	intrn	248016	248064	.	-	.	Parent=CGI_10011932;
	scaffold1874	TRF	Tandem_Repeat	248016	248064	89	+	.	.
scaffold1874	subtractBed	intrn	248152	248199	.	-	.	Parent=CGI_10011932;
	scaffold1874	TRF	Tandem_Repeat	248152	248199	96	+	.	.
scaffold1874	subtractBed	intrn	256147	256203	.	-	.	Parent=CGI_10011932;
	scaffold1874	TRF	Tandem_Repeat	256147	256203	105	+	.	.
scaffold1874	subtractBed	intrn	296406	296544	.	+	.	Parent=CGI_10011933;
	scaffold1874	WUBlastX	LINE_L1	296406	296900	24	+	.	.
scaffold1875	subtractBed	intrn	22769	22921	.	+	.	Parent=CGI_10006624;
	scaffold1875	WUBlastX	DNA_Zator	22658	22921	67	-	.	.
scaffold1875	subtractBed	intrn	23624	23635	.	+	.	Parent=CGI_10006624;
	scaffold1875	WUBlastX	DNA_Zator	23429	23635	57	-	.	.
scaffold1875	subtractBed	intrn	23709	23711	.	+	.	Parent=CGI_10006624;
	scaffold1875	WUBlastX	DNA_Zator	23709	25169	676	-	.	.
scaffold1875	subtractBed	intrn	24930	25169	.	+	.	Parent=CGI_10006624;
	scaffold1875	WUBlastX	DNA_Zator	23709	25169	676	-	.	.
scaffold1875	subtractBed	intrn	28236	28353	.	+	.	Parent=CGI_10006624;
	scaffold1875	TRF	Tandem_Repeat	28236	28353	227	+	.	.
scaffold1875	subtractBed	intrn	23624	23635	.	-	.	Parent=CGI_10006626;
	scaffold1875	WUBlastX	DNA_Zator	23429	23635	57	-	.	.
scaffold1875	subtractBed	intrn	23709	23711	.	-	.	Parent=CGI_10006626;
	scaffold1875	WUBlastX	DNA_Zator	23709	25169	676	-	.	.
scaffold1875	subtractBed	intrn	46310	46343	.	+	.	Parent=CGI_10006627;
	scaffold1875	TRF	Tandem_Repeat	46310	46343	68	+	.	.
scaffold1875	subtractBed	intrn	47315	47383	.	+	.	Parent=CGI_10006627;
	scaffold1875	TRF	Tandem_Repeat	47315	47383	131	+	.	.
scaffold1875	subtractBed	intrn	59280	59312	.	+	.	Parent=CGI_10006628;
	scaffold1875	TRF	Tandem_Repeat	59280	59312	66	+	.	.
scaffold1875	subtractBed	intrn	64869	64960	.	+	.	Parent=CGI_10006628;
	scaffold1875	TRF	Tandem_Repeat	64869	64960	147	+	.	.
scaffold1875	subtractBed	intrn	64869	64960	.	+	.	Parent=CGI_10006628;
	scaffold1875	TRF	Tandem_Repeat	64869	64960	159	+	.	.
scaffold1875	subtractBed	intrn	112792	112838	.	+	.	Parent=CGI_10006630;
	scaffold1875	TRF	Tandem_Repeat	112792	112838	94	+	.	.
scaffold1875	subtractBed	intrn	112836	112870	.	+	.	Parent=CGI_10006630;
	scaffold1875	TRF	Tandem_Repeat	112836	112870	70	+	.	.
scaffold1875	subtractBed	intrn	121849	121890	.	+	.	Parent=CGI_10006630;
	scaffold1875	TRF	Tandem_Repeat	121849	121890	84	+	.	.
scaffold1875	subtractBed	intrn	143017	143051	.	+	.	Parent=CGI_10006630;
	scaffold1875	TRF	Tandem_Repeat	143017	143051	63	+	.	.
scaffold1875	subtractBed	intrn	144025	144139	.	+	.	Parent=CGI_10006630;
	scaffold1875	WUBlastX	LINE_CR1-L2	144025	144279	57	+	.	.
scaffold1876	subtractBed	intrn	10494	10532	.	+	.	Parent=CGI_10004962;
	scaffold1876	TRF	Tandem_Repeat	10494	10532	78	+	.	.
scaffold1876	subtractBed	intrn	11995	13872	.	+	.	Parent=CGI_10004962;
	scaffold1876	TRF	Tandem_Repeat	11995	13872	2645	+	.	.
scaffold1876	subtractBed	intrn	23021	23050	.	-	.	Parent=CGI_10004963;
	scaffold1876	TRF	Tandem_Repeat	23021	23050	51	+	.	.
scaffold1876	subtractBed	intrn	34716	34810	.	-	.	Parent=CGI_10004964;
	scaffold1876	TRF	Tandem_Repeat	34716	34810	113	+	.	.
scaffold1876	subtractBed	intrn	34516	34945	.	-	.	Parent=CGI_10004964;
	scaffold1876	TRF	Tandem_Repeat	34516	34945	434	+	.	.
scaffold1876	subtractBed	intrn	34797	34863	.	-	.	Parent=CGI_10004964;
	scaffold1876	TRF	Tandem_Repeat	34797	34863	63	+	.	.
scaffold1876	subtractBed	intrn	41525	41818	.	+	.	Parent=CGI_10004965;
	scaffold1876	TRF	Tandem_Repeat	41525	41818	543	+	.	.
scaffold1876	subtractBed	intrn	81457	81497	.	+	.	Parent=CGI_10004967;
	scaffold1876	TRF	Tandem_Repeat	81457	81497	82	+	.	.
scaffold1877	subtractBed	intrn	65713	66009	.	+	.	Parent=CGI_10011953;
	scaffold1877	TRF	Tandem_Repeat	65702	66009	421	+	.	.
scaffold1877	subtractBed	intrn	67159	68901	.	+	.	Parent=CGI_10011953;
	scaffold1877	TRF	Tandem_Repeat	67159	68901	2537	+	.	.
scaffold1877	subtractBed	intrn	79466	79649	.	+	.	Parent=CGI_10011954;
	scaffold1877	TRF	Tandem_Repeat	79455	79649	311	+	.	.
scaffold1877	subtractBed	intrn	85001	85076	.	-	.	Parent=CGI_10011955;
	scaffold1877	TRF	Tandem_Repeat	85001	85076	56	+	.	.
scaffold1877	subtractBed	intrn	85001	85081	.	-	.	Parent=CGI_10011955;
	scaffold1877	TRF	Tandem_Repeat	85001	85081	74	+	.	.
scaffold1877	subtractBed	intrn	94686	95101	.	-	.	Parent=CGI_10011956;
	scaffold1877	TRF	Tandem_Repeat	94686	95101	511	+	.	.
scaffold1877	subtractBed	intrn	98822	98879	.	-	.	Parent=CGI_10011956;
	scaffold1877	WUBlastX	DNA_NOF?	98822	98962	35	-	.	.
scaffold1877	subtractBed	intrn	106337	106370	.	+	.	Parent=CGI_10011957;
	scaffold1877	TRF	Tandem_Repeat	106337	106370	68	+	.	.
scaffold1877	subtractBed	intrn	107044	107117	.	+	.	Parent=CGI_10011957;
	scaffold1877	TRF	Tandem_Repeat	107044	107117	112	+	.	.
scaffold1877	subtractBed	intrn	114713	115272	.	+	.	Parent=CGI_10011958;
	scaffold1877	TRF	Tandem_Repeat	114713	115272	1057	+	.	.
scaffold1877	subtractBed	intrn	121571	121644	.	+	.	Parent=CGI_10011958;
	scaffold1877	TRF	Tandem_Repeat	121571	121644	53	+	.	.
scaffold1877	subtractBed	intrn	207754	208209	.	-	.	Parent=CGI_10011959;
	scaffold1877	TRF	Tandem_Repeat	207754	208209	804	+	.	.
scaffold1877	subtractBed	intrn	271446	271847	.	+	.	Parent=CGI_10011961;
	scaffold1877	TRF	Tandem_Repeat	271446	271847	540	+	.	.
scaffold1877	subtractBed	intrn	275021	275066	.	+	.	Parent=CGI_10011961;
	scaffold1877	TRF	Tandem_Repeat	275021	275066	65	+	.	.
scaffold1877	subtractBed	intrn	275468	275677	.	+	.	Parent=CGI_10011961;
	scaffold1877	WUBlastX	LINE_RTE-BovB	275468	275677	45	-	.	.
scaffold1877	subtractBed	intrn	289962	290048	.	+	.	Parent=CGI_10011962;
	scaffold1877	TRF	Tandem_Repeat	289962	290048	93	+	.	.
scaffold1877	subtractBed	intrn	290114	290334	.	+	.	Parent=CGI_10011962;
	scaffold1877	TRF	Tandem_Repeat	290114	290334	130	+	.	.
scaffold1877	subtractBed	intrn	290114	290306	.	+	.	Parent=CGI_10011962;
	scaffold1877	TRF	Tandem_Repeat	290114	290306	183	+	.	.
scaffold1877	subtractBed	intrn	290333	290577	.	+	.	Parent=CGI_10011962;
	scaffold1877	TRF	Tandem_Repeat	290333	290577	217	+	.	.
scaffold1877	subtractBed	intrn	299290	299493	.	+	.	Parent=CGI_10011963;
	scaffold1877	WUBlastX	LINE_RTE-X	299290	299493	83	+	.	.
scaffold1877	subtractBed	intrn	299290	299562	.	+	.	Parent=CGI_10011963;
	scaffold1877	WUBlastX	LINE_RTE-X	299290	299562	55	+	.	.
scaffold1877	subtractBed	intrn	298061	298378	.	+	.	Parent=CGI_10011963;
	scaffold1877	WUBlastX	LINE_RTE-X	298061	298378	175	+	.	.
scaffold1877	subtractBed	intrn	298001	298309	.	+	.	Parent=CGI_10011963;
	scaffold1877	WUBlastX	LINE_Rex-Babar	298001	298309	47	+	.	.
scaffold1877	subtractBed	intrn	298378	298944	.	+	.	Parent=CGI_10011963;
	scaffold1877	WUBlastX	LINE_RTE-X	298378	298944	206	+	.	.
scaffold1878	subtractBed	intrn	78537	78582	.	-	.	Parent=CGI_10005491;
	scaffold1878	TRF	Tandem_Repeat	78537	78582	92	+	.	.
scaffold1878	subtractBed	intrn	104401	104452	.	-	.	Parent=CGI_10005493;
	scaffold1878	TRF	Tandem_Repeat	104401	104452	104	+	.	.
scaffold1878	subtractBed	intrn	111194	111245	.	+	.	Parent=CGI_10005494;
	scaffold1878	TRF	Tandem_Repeat	111194	111245	104	+	.	.
scaffold1879	subtractBed	intrn	23808	23854	.	+	.	Parent=CGI_10007952;
	scaffold1879	TRF	Tandem_Repeat	23808	23854	51	+	.	.
scaffold1879	subtractBed	intrn	38310	38422	.	-	.	Parent=CGI_10007953;
	scaffold1879	TRF	Tandem_Repeat	38310	38422	81	+	.	.
scaffold1879	subtractBed	intrn	38348	38470	.	-	.	Parent=CGI_10007953;
	scaffold1879	TRF	Tandem_Repeat	38348	38470	131	+	.	.
scaffold1879	subtractBed	intrn	79467	79522	.	+	.	Parent=CGI_10007954;
	scaffold1879	TRF	Tandem_Repeat	79467	79522	105	+	.	.
scaffold1879	subtractBed	intrn	105217	105248	.	-	.	Parent=CGI_10007957;
	scaffold1879	TRF	Tandem_Repeat	105217	105248	57	+	.	.
scaffold1879	subtractBed	intrn	120064	120471	.	-	.	Parent=CGI_10007960;
	scaffold1879	WUBlastX	LINE_CR1-L2	120064	120471	147	-	.	.
scaffold1879	subtractBed	intrn	120512	122080	.	-	.	Parent=CGI_10007960;
	scaffold1879	WUBlastX	LINE_CR1	120512	122272	357	-	.	.
scaffold1879	subtractBed	intrn	120136	120504	.	-	.	Parent=CGI_10007960;
	scaffold1879	WUBlastX	LINE_CR1-L2	120136	120504	183	-	.	.
scaffold1879	subtractBed	intrn	120506	121999	.	-	.	Parent=CGI_10007960;
	scaffold1879	WUBlastX	LINE_CR1-L2	120506	121999	737	-	.	.
scaffold1879	subtractBed	intrn	179078	179219	.	+	.	Parent=CGI_10007962;
	scaffold1879	TRF	Tandem_Repeat	179078	179219	146	+	.	.
scaffold1879	subtractBed	intrn	183276	183321	.	+	.	Parent=CGI_10007962;
	scaffold1879	TRF	Tandem_Repeat	183276	183321	92	+	.	.
scaffold1879	subtractBed	intrn	185157	185194	.	+	.	Parent=CGI_10007962;
	scaffold1879	TRF	Tandem_Repeat	185157	185194	67	+	.	.
scaffold188	subtractBed	intrn	12671	13783	.	+	.	Parent=CGI_10009311;
	scaffold188	WUBlastX	DNA_Zator	12671	13783	391	+	.	.
scaffold188	subtractBed	intrn	12383	12556	.	+	.	Parent=CGI_10009311;
	scaffold188	WUBlastX	DNA_Zator	12383	12556	32	+	.	.
scaffold188	subtractBed	intrn	94894	94981	.	-	.	Parent=CGI_10009313;
	scaffold188	TRF	Tandem_Repeat	94894	94981	162	+	.	.
scaffold188	subtractBed	intrn	99093	99137	.	-	.	Parent=CGI_10009313;
	scaffold188	TRF	Tandem_Repeat	99093	99137	90	+	.	.
scaffold188	subtractBed	intrn	187588	187627	.	-	.	Parent=CGI_10009316;
	scaffold188	TRF	Tandem_Repeat	187588	187627	53	+	.	.
scaffold188	subtractBed	intrn	187748	187779	.	-	.	Parent=CGI_10009316;
	scaffold188	TRF	Tandem_Repeat	187748	187779	64	+	.	.
scaffold1880	subtractBed	intrn	42796	42841	.	-	.	Parent=CGI_10008204;
	scaffold1880	TRF	Tandem_Repeat	42796	42841	92	+	.	.
scaffold1880	subtractBed	intrn	51497	51853	.	-	.	Parent=CGI_10008204;
	scaffold1880	WUBlastX	LINE_L2	51497	51853	52	+	.	.
scaffold1880	subtractBed	intrn	51551	54814	.	-	.	Parent=CGI_10008204;
	scaffold1880	WUBlastX	LINE_RTE-X	51551	54814	926	+	.	.
scaffold1880	subtractBed	intrn	52502	54811	.	-	.	Parent=CGI_10008204;
	scaffold1880	WUBlastX	LINE_RTE-X	52502	54811	1112	+	.	.
scaffold1880	subtractBed	intrn	69764	69817	.	-	.	Parent=CGI_10008204;
	scaffold1880	TRF	Tandem_Repeat	69764	69817	108	+	.	.
scaffold1880	subtractBed	intrn	110509	110562	.	-	.	Parent=CGI_10008206;
	scaffold1880	TRF	Tandem_Repeat	110509	110562	108	+	.	.
scaffold1880	subtractBed	intrn	113798	113858	.	-	.	Parent=CGI_10008206;
	scaffold1880	TRF	Tandem_Repeat	113798	113858	122	+	.	.
scaffold1880	subtractBed	intrn	128659	128698	.	-	.	Parent=CGI_10008207;
	scaffold1880	TRF	Tandem_Repeat	128659	128698	53	+	.	.
scaffold1880	subtractBed	intrn	130606	130640	.	-	.	Parent=CGI_10008207;
	scaffold1880	TRF	Tandem_Repeat	130606	130640	70	+	.	.
scaffold1880	subtractBed	intrn	151783	151811	.	-	.	Parent=CGI_10008210;
	scaffold1880	TRF	Tandem_Repeat	151783	151811	58	+	.	.
scaffold1880	subtractBed	intrn	174939	175067	.	-	.	Parent=CGI_10008213;
	scaffold1880	TRF	Tandem_Repeat	174939	175067	132	+	.	.
scaffold1880	subtractBed	intrn	178245	178287	.	-	.	Parent=CGI_10008213;
	scaffold1880	TRF	Tandem_Repeat	178245	178287	86	+	.	.
scaffold1880	subtractBed	intrn	180402	181815	.	-	.	Parent=CGI_10008213;
	scaffold1880	TRF	Tandem_Repeat	180402	181815	2006	+	.	.
scaffold1880	subtractBed	intrn	191335	191913	.	-	.	Parent=CGI_10008214;
	scaffold1880	WUBlastX	LTR_Pao	191335	191913	196	+	.	.
scaffold1880	subtractBed	intrn	191440	191916	.	-	.	Parent=CGI_10008214;
	scaffold1880	WUBlastX	LTR_Pao	191440	191916	364	+	.	.
scaffold1880	subtractBed	intrn	200053	200083	.	+	.	Parent=CGI_10008216;
	scaffold1880	TRF	Tandem_Repeat	200053	200083	62	+	.	.
scaffold1881	subtractBed	intrn	15309	15346	.	+	.	Parent=CGI_10006127;
	scaffold1881	TRF	Tandem_Repeat	15309	15346	76	+	.	.
scaffold1881	subtractBed	intrn	22180	23010	.	+	.	Parent=CGI_10006128;
	scaffold1881	TRF	Tandem_Repeat	22180	23010	934	+	.	.
scaffold1881	subtractBed	intrn	41009	41087	.	-	.	Parent=CGI_10006129;
	scaffold1881	TRF	Tandem_Repeat	41009	41087	113	+	.	.
scaffold1881	subtractBed	intrn	125119	125187	.	+	.	Parent=CGI_10006138;
	scaffold1881	TRF	Tandem_Repeat	125119	125187	138	+	.	.
scaffold1882	subtractBed	intrn	18201	18527	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18201	18527	26	+	.	.
scaffold1882	subtractBed	intrn	18121	18228	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18121	18228	51	+	.	.
scaffold1882	subtractBed	intrn	18207	18446	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18207	18446	176	+	.	.
scaffold1882	subtractBed	intrn	18634	18897	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18634	18897	75	+	.	.
scaffold1882	subtractBed	intrn	18998	19423	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18998	19423	336	+	.	.
scaffold1882	subtractBed	intrn	19413	19478	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	19413	19478	34	+	.	.
scaffold1882	subtractBed	intrn	19413	19496	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	19413	19496	27	+	.	.
scaffold1882	subtractBed	intrn	18860	19432	.	+	.	Parent=CGI_10010492;
	scaffold1882	WUBlastX	LTR_Pao	18860	19432	131	+	.	.
scaffold1882	subtractBed	intrn	34488	34547	.	+	.	Parent=CGI_10010493;
	scaffold1882	TRF	Tandem_Repeat	34488	34547	75	+	.	.
scaffold1882	subtractBed	intrn	34479	34546	.	+	.	Parent=CGI_10010493;
	scaffold1882	TRF	Tandem_Repeat	34479	34546	64	+	.	.
scaffold1882	subtractBed	intrn	34479	34538	.	+	.	Parent=CGI_10010493;
	scaffold1882	TRF	Tandem_Repeat	34479	34538	84	+	.	.
scaffold1882	subtractBed	intrn	95837	95882	.	+	.	Parent=CGI_10010498;
	scaffold1882	TRF	Tandem_Repeat	95837	95882	92	+	.	.
scaffold1882	subtractBed	intrn	98900	98943	.	+	.	Parent=CGI_10010498;
	scaffold1882	TRF	Tandem_Repeat	98900	98943	88	+	.	.
scaffold1882	subtractBed	intrn	126103	126149	.	+	.	Parent=CGI_10010503;
	scaffold1882	TRF	Tandem_Repeat	126103	126149	94	+	.	.
scaffold1882	subtractBed	intrn	136729	137448	.	+	.	Parent=CGI_10010505;
	scaffold1882	TRF	Tandem_Repeat	136729	137448	449	+	.	.
scaffold1882	subtractBed	intrn	136839	137429	.	+	.	Parent=CGI_10010505;
	scaffold1882	TRF	Tandem_Repeat	136839	137429	581	+	.	.
scaffold1882	subtractBed	intrn	136839	137429	.	+	.	Parent=CGI_10010505;
	scaffold1882	TRF	Tandem_Repeat	136839	137429	542	+	.	.
scaffold1882	subtractBed	intrn	147918	148403	.	+	.	Parent=CGI_10010506;
	scaffold1882	WUBlastX	LTR_DIRS	147918	148403	75	-	.	.
scaffold1882	subtractBed	intrn	148929	149744	.	+	.	Parent=CGI_10010506;
	scaffold1882	WUBlastX	LTR_DIRS	148929	149744	73	-	.	.
scaffold1882	subtractBed	intrn	148372	148914	.	+	.	Parent=CGI_10010506;
	scaffold1882	WUBlastX	LTR_Ngaro	148372	148914	99	-	.	.
scaffold1882	subtractBed	intrn	148929	149618	.	+	.	Parent=CGI_10010506;
	scaffold1882	WUBlastX	LTR_DIRS	148929	149618	156	-	.	.
scaffold1882	subtractBed	intrn	147813	148403	.	+	.	Parent=CGI_10010506;
	scaffold1882	WUBlastX	LTR_DIRS	147813	148403	66	-	.	.
scaffold1882	subtractBed	intrn	160602	160668	.	+	.	Parent=CGI_10010508;
	scaffold1882	TRF	Tandem_Repeat	160602	160668	54	+	.	.
scaffold1882	subtractBed	intrn	160602	160668	.	+	.	Parent=CGI_10010508;
	scaffold1882	TRF	Tandem_Repeat	160602	160668	66	+	.	.
scaffold1882	subtractBed	intrn	177326	177522	.	+	.	Parent=CGI_10010510;
	scaffold1882	TRF	Tandem_Repeat	177326	177522	89	+	.	.
scaffold1882	subtractBed	intrn	177233	177529	.	+	.	Parent=CGI_10010510;
	scaffold1882	TRF	Tandem_Repeat	177233	177529	490	+	.	.
scaffold1882	subtractBed	intrn	180512	180959	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	180512	180959	666	+	.	.
scaffold1882	subtractBed	intrn	180508	182050	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	180508	182050	1580	+	.	.
scaffold1882	subtractBed	intrn	181034	182050	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	181034	182050	1469	+	.	.
scaffold1882	subtractBed	intrn	182815	183004	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	182815	183004	353	+	.	.
scaffold1882	subtractBed	intrn	188753	188966	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	188753	188966	185	+	.	.
scaffold1882	subtractBed	intrn	189257	189449	.	+	.	Parent=CGI_10010511;
	scaffold1882	TRF	Tandem_Repeat	189257	189449	260	+	.	.
scaffold1883	subtractBed	intrn	58143	58242	.	-	.	Parent=CGI_10011542;
	scaffold1883	TRF	Tandem_Repeat	58143	58242	163	+	.	.
scaffold1883	subtractBed	intrn	60092	60318	.	-	.	Parent=CGI_10011542;
	scaffold1883	TRF	Tandem_Repeat	60092	60318	216	+	.	.
scaffold1883	subtractBed	intrn	77881	77932	.	-	.	Parent=CGI_10011543;
	scaffold1883	TRF	Tandem_Repeat	77881	77932	77	+	.	.
scaffold1884	subtractBed	intrn	6227	7272	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	6227	7307	1600	+	.	.
scaffold1884	subtractBed	intrn	7893	8166	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	7891	8166	216	+	.	.
scaffold1884	subtractBed	intrn	7895	8310	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	7895	8310	478	+	.	.
scaffold1884	subtractBed	intrn	10414	10465	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	10414	10465	104	+	.	.
scaffold1884	subtractBed	intrn	10730	10760	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	10730	10760	62	+	.	.
scaffold1884	subtractBed	intrn	11328	11644	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	11312	11644	420	+	.	.
scaffold1884	subtractBed	intrn	12294	12745	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	12294	12745	715	+	.	.
scaffold1884	subtractBed	intrn	13375	14037	.	+	.	Parent=CGI_10012005;
	scaffold1884	TRF	Tandem_Repeat	13358	14037	1096	+	.	.
scaffold1884	subtractBed	intrn	19062	20721	.	-	.	Parent=CGI_10012006;
	scaffold1884	TRF	Tandem_Repeat	19062	20721	2071	+	.	.
scaffold1884	subtractBed	intrn	20896	20930	.	-	.	Parent=CGI_10012006;
	scaffold1884	WUBlastX	LTR_Gypsy	20896	21189	49	-	.	.
scaffold1884	subtractBed	intrn	21183	21189	.	-	.	Parent=CGI_10012006;
	scaffold1884	WUBlastX	LTR_Gypsy	20896	21189	49	-	.	.
scaffold1884	subtractBed	intrn	33702	33941	.	-	.	Parent=CGI_10012008;
	scaffold1884	WUBlastX	LTR_Gypsy	33702	33941	20	-	.	.
scaffold1884	subtractBed	intrn	53654	54544	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	53654	54544	717	+	.	.
scaffold1884	subtractBed	intrn	53654	54513	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	53654	54513	643	+	.	.
scaffold1884	subtractBed	intrn	53661	54513	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	53661	54513	667	+	.	.
scaffold1884	subtractBed	intrn	59702	59727	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	59702	59727	52	+	.	.
scaffold1884	subtractBed	intrn	62575	62616	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	62575	62616	50	+	.	.
scaffold1884	subtractBed	intrn	69957	70217	.	+	.	Parent=CGI_10012009;
	scaffold1884	TRF	Tandem_Repeat	69957	70217	271	+	.	.
scaffold1884	subtractBed	intrn	88372	89088	.	+	.	Parent=CGI_10012010;
	scaffold1884	TRF	Tandem_Repeat	88372	89088	582	+	.	.
scaffold1884	subtractBed	intrn	88372	89088	.	+	.	Parent=CGI_10012010;
	scaffold1884	TRF	Tandem_Repeat	88372	89088	691	+	.	.
scaffold1884	subtractBed	intrn	89877	89930	.	+	.	Parent=CGI_10012010;
	scaffold1884	TRF	Tandem_Repeat	89877	89930	99	+	.	.
scaffold1884	subtractBed	intrn	93545	93595	.	+	.	Parent=CGI_10012010;
	scaffold1884	TRF	Tandem_Repeat	93545	93595	102	+	.	.
scaffold1884	subtractBed	intrn	109737	110197	.	+	.	Parent=CGI_10012011;
	scaffold1884	TRF	Tandem_Repeat	109737	110197	366	+	.	.
scaffold1884	subtractBed	intrn	109737	110191	.	+	.	Parent=CGI_10012011;
	scaffold1884	TRF	Tandem_Repeat	109737	110191	463	+	.	.
scaffold1884	subtractBed	intrn	118404	118767	.	-	.	Parent=CGI_10012012;
	scaffold1884	TRF	Tandem_Repeat	118404	118767	440	+	.	.
scaffold1884	subtractBed	intrn	118669	118765	.	-	.	Parent=CGI_10012012;
	scaffold1884	TRF	Tandem_Repeat	118669	118765	50	+	.	.
scaffold1884	subtractBed	intrn	120013	120066	.	-	.	Parent=CGI_10012012;
	scaffold1884	TRF	Tandem_Repeat	120013	120066	108	+	.	.
scaffold1884	subtractBed	intrn	134839	134941	.	+	.	Parent=CGI_10012014;
	scaffold1884	TRF	Tandem_Repeat	134835	134941	196	+	.	.
scaffold1884	subtractBed	intrn	137422	137574	.	+	.	Parent=CGI_10012014;
	scaffold1884	TRF	Tandem_Repeat	137422	137574	306	+	.	.
scaffold1884	subtractBed	intrn	142658	143488	.	+	.	Parent=CGI_10012014;
	scaffold1884	WUBlastX	LINE_RTE-BovB	142658	143488	643	-	.	.
scaffold1884	subtractBed	intrn	143027	143593	.	+	.	Parent=CGI_10012014;
	scaffold1884	WUBlastX	LINE_CR1-L2	143027	143593	49	-	.	.
scaffold1884	subtractBed	intrn	141424	142677	.	+	.	Parent=CGI_10012014;
	scaffold1884	WUBlastX	LINE_RTE-BovB	141424	142677	897	-	.	.
scaffold1884	subtractBed	intrn	141281	141418	.	+	.	Parent=CGI_10012014;
	scaffold1884	WUBlastX	LINE_RTE-BovB	141281	141418	59	-	.	.
scaffold1884	subtractBed	intrn	191141	191183	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	191141	191183	86	+	.	.
scaffold1884	subtractBed	intrn	191400	192177	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	191400	192177	378	+	.	.
scaffold1884	subtractBed	intrn	191420	191914	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	191420	191914	458	+	.	.
scaffold1884	subtractBed	intrn	191494	192149	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	191494	192149	380	+	.	.
scaffold1884	subtractBed	intrn	192735	194481	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	192735	194481	2254	+	.	.
scaffold1884	subtractBed	intrn	194965	195011	.	+	.	Parent=CGI_10012016;
	scaffold1884	TRF	Tandem_Repeat	194965	195011	94	+	.	.
scaffold1885	subtractBed	intrn	64233	64427	.	-	.	Parent=CGI_10013896;
	scaffold1885	TRF	Tandem_Repeat	64233	64427	108	+	.	.
scaffold1885	subtractBed	intrn	67277	67365	.	-	.	Parent=CGI_10013896;
	scaffold1885	TRF	Tandem_Repeat	67277	67365	81	+	.	.
scaffold1885	subtractBed	intrn	112924	113115	.	-	.	Parent=CGI_10013898;
	scaffold1885	WUBlastX	LINE_Penelope	112924	113115	55	-	.	.
scaffold1885	subtractBed	intrn	181826	182744	.	+	.	Parent=CGI_10013899;
	scaffold1885	TRF	Tandem_Repeat	181826	182744	984	+	.	.
scaffold1885	subtractBed	intrn	261215	261268	.	+	.	Parent=CGI_10013903;
	scaffold1885	TRF	Tandem_Repeat	261215	261268	90	+	.	.
scaffold1885	subtractBed	intrn	262725	262766	.	+	.	Parent=CGI_10013903;
	scaffold1885	TRF	Tandem_Repeat	262725	262766	84	+	.	.
scaffold1885	subtractBed	intrn	297334	297374	.	+	.	Parent=CGI_10013904;
	scaffold1885	TRF	Tandem_Repeat	297334	297374	50	+	.	.
scaffold1885	subtractBed	intrn	297334	297374	.	+	.	Parent=CGI_10013904;
	scaffold1885	TRF	Tandem_Repeat	297334	297374	50	+	.	.
scaffold1885	subtractBed	intrn	359032	359075	.	+	.	Parent=CGI_10013905;
	scaffold1885	TRF	Tandem_Repeat	359032	359075	61	+	.	.
scaffold1885	subtractBed	intrn	359858	359956	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_I	359858	359956	28	-	.	.
scaffold1885	subtractBed	intrn	360515	360745	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_CR1-L2	360515	360745	75	-	.	.
scaffold1885	subtractBed	intrn	360051	360518	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_L2	360051	360518	103	-	.	.
scaffold1885	subtractBed	intrn	360174	360518	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_CR1-L2	360174	360518	169	-	.	.
scaffold1885	subtractBed	intrn	369874	369917	.	+	.	Parent=CGI_10013905;
	scaffold1885	TRF	Tandem_Repeat	369874	369917	52	+	.	.
scaffold1885	subtractBed	intrn	364710	365627	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_L1-Tx1	364710	365627	124	+	.	.
scaffold1885	subtractBed	intrn	364698	365309	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_L1-Tx1	364698	365309	154	+	.	.
scaffold1885	subtractBed	intrn	364632	364898	.	+	.	Parent=CGI_10013905;
	scaffold1885	WUBlastX	LINE_L1	364632	364898	104	+	.	.
scaffold1886	subtractBed	intrn	10488	10529	.	+	.	Parent=CGI_10012882;
	scaffold1886	TRF	Tandem_Repeat	10488	10529	84	+	.	.
scaffold1886	subtractBed	intrn	32349	32401	.	-	.	Parent=CGI_10012884;
	scaffold1886	TRF	Tandem_Repeat	32349	32401	69	+	.	.
scaffold1886	subtractBed	intrn	84688	84730	.	-	.	Parent=CGI_10012885;
	scaffold1886	TRF	Tandem_Repeat	84688	84730	86	+	.	.
scaffold1886	subtractBed	intrn	85351	85388	.	-	.	Parent=CGI_10012885;
	scaffold1886	TRF	Tandem_Repeat	85351	85388	76	+	.	.
scaffold1886	subtractBed	intrn	89411	89481	.	-	.	Parent=CGI_10012885;
	scaffold1886	TRF	Tandem_Repeat	89411	89481	133	+	.	.
scaffold1886	subtractBed	intrn	92983	93032	.	-	.	Parent=CGI_10012885;
	scaffold1886	TRF	Tandem_Repeat	92983	93032	100	+	.	.
scaffold1886	subtractBed	intrn	104183	104191	.	-	.	Parent=CGI_10012886;
	scaffold1886	WUBlastX	DNA_Kolobok-IS4	104024	104191	38	-	.	.
scaffold1886	subtractBed	intrn	104275	104280	.	-	.	Parent=CGI_10012886;
	scaffold1886	WUBlastX	DNA_Kolobok-IS4	104275	104700	66	-	.	.
scaffold1886	subtractBed	intrn	232277	232318	.	+	.	Parent=CGI_10012892;
	scaffold1886	TRF	Tandem_Repeat	232277	232318	84	+	.	.
scaffold1886	subtractBed	intrn	239195	239243	.	+	.	Parent=CGI_10012892;
	scaffold1886	TRF	Tandem_Repeat	239195	239243	98	+	.	.
scaffold1886	subtractBed	intrn	250122	250159	.	+	.	Parent=CGI_10012893;
	scaffold1886	TRF	Tandem_Repeat	250122	250159	60	+	.	.
scaffold1888	subtractBed	intrn	52334	52369	.	+	.	Parent=CGI_10013292;
	scaffold1888	TRF	Tandem_Repeat	52334	52369	63	+	.	.
scaffold1888	subtractBed	intrn	51190	51564	.	+	.	Parent=CGI_10013292;
	scaffold1888	WUBlastX	DNA_TcMar-Pogo	51190	51564	60	+	.	.
scaffold1888	subtractBed	intrn	51546	51641	.	+	.	Parent=CGI_10013292;
	scaffold1888	WUBlastX	DNA_TcMar-Pogo	51546	51641	34	+	.	.
scaffold1888	subtractBed	intrn	51748	52623	.	+	.	Parent=CGI_10013292;
	scaffold1888	WUBlastX	DNA_TcMar-Pogo	51748	52623	340	+	.	.
scaffold1888	subtractBed	intrn	51199	51414	.	+	.	Parent=CGI_10013292;
	scaffold1888	WUBlastX	DNA_TcMar-Pogo	51199	51414	90	+	.	.
scaffold1888	subtractBed	intrn	51546	51608	.	+	.	Parent=CGI_10013292;
	scaffold1888	WUBlastX	DNA_TcMar-Tigge	51546	51608	43	+	.	.
scaffold1888	subtractBed	intrn	68198	68230	.	-	.	Parent=CGI_10013295;
	scaffold1888	TRF	Tandem_Repeat	68198	68230	66	+	.	.
scaffold1888	subtractBed	intrn	77295	78065	.	-	.	Parent=CGI_10013295;
	scaffold1888	WUBlastX	LINE_RTE-X	77295	78065	175	+	.	.
scaffold1888	subtractBed	intrn	76443	77924	.	-	.	Parent=CGI_10013295;
	scaffold1888	WUBlastX	LINE_RTE-X	76443	77924	570	+	.	.
scaffold1888	subtractBed	intrn	97157	97193	.	-	.	Parent=CGI_10013296;
	scaffold1888	TRF	Tandem_Repeat	97157	97193	56	+	.	.
scaffold1888	subtractBed	intrn	98475	98506	.	-	.	Parent=CGI_10013296;
	scaffold1888	TRF	Tandem_Repeat	98475	98506	55	+	.	.
scaffold1888	subtractBed	intrn	101992	102034	.	-	.	Parent=CGI_10013296;
	scaffold1888	TRF	Tandem_Repeat	101992	102034	86	+	.	.
scaffold1888	subtractBed	intrn	118399	118436	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	118399	118436	67	+	.	.
scaffold1888	subtractBed	intrn	125448	125521	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	125448	125521	148	+	.	.
scaffold1888	subtractBed	intrn	137231	137259	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	137231	137259	58	+	.	.
scaffold1888	subtractBed	intrn	141280	141326	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	141280	141326	94	+	.	.
scaffold1888	subtractBed	intrn	143959	144008	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	143959	144008	100	+	.	.
scaffold1888	subtractBed	intrn	146659	146690	.	+	.	Parent=CGI_10013297;
	scaffold1888	TRF	Tandem_Repeat	146659	146690	64	+	.	.
scaffold1888	subtractBed	intrn	137231	137259	.	-	.	Parent=CGI_10013299;
	scaffold1888	TRF	Tandem_Repeat	137231	137259	58	+	.	.
scaffold1888	subtractBed	intrn	143959	144008	.	-	.	Parent=CGI_10013301;
	scaffold1888	TRF	Tandem_Repeat	143959	144008	100	+	.	.
scaffold1888	subtractBed	intrn	192812	192852	.	-	.	Parent=CGI_10013303;
	scaffold1888	TRF	Tandem_Repeat	192812	192852	82	+	.	.
scaffold1888	subtractBed	intrn	197725	198459	.	-	.	Parent=CGI_10013303;
	scaffold1888	TRF	Tandem_Repeat	197725	198459	700	+	.	.
scaffold1888	subtractBed	intrn	198632	198674	.	-	.	Parent=CGI_10013303;
	scaffold1888	TRF	Tandem_Repeat	198632	198674	56	+	.	.
scaffold1888	subtractBed	intrn	270291	270866	.	-	.	Parent=CGI_10013306;
	scaffold1888	TRF	Tandem_Repeat	270291	270884	817	+	.	.
scaffold1888	subtractBed	intrn	270355	270866	.	-	.	Parent=CGI_10013306;
	scaffold1888	TRF	Tandem_Repeat	270355	270884	806	+	.	.
scaffold1888	subtractBed	intrn	288585	289174	.	+	.	Parent=CGI_10013307;
	scaffold1888	TRF	Tandem_Repeat	288585	289174	665	+	.	.
scaffold1888	subtractBed	intrn	325332	325753	.	-	.	Parent=CGI_10013310;
	scaffold1888	TRF	Tandem_Repeat	325332	325788	662	+	.	.
scaffold1889	subtractBed	intrn	76079	76148	.	-	.	Parent=CGI_10019602;
	scaffold1889	TRF	Tandem_Repeat	76079	76148	140	+	.	.
scaffold1889	subtractBed	intrn	76986	77028	.	-	.	Parent=CGI_10019602;
	scaffold1889	TRF	Tandem_Repeat	76986	77028	86	+	.	.
scaffold1889	subtractBed	intrn	82938	82992	.	-	.	Parent=CGI_10019602;
	scaffold1889	TRF	Tandem_Repeat	82938	82992	56	+	.	.
scaffold1889	subtractBed	intrn	84929	84978	.	-	.	Parent=CGI_10019602;
	scaffold1889	TRF	Tandem_Repeat	84929	84978	64	+	.	.
scaffold1889	subtractBed	intrn	157227	157278	.	-	.	Parent=CGI_10019606;
	scaffold1889	TRF	Tandem_Repeat	157227	157278	104	+	.	.
scaffold1889	subtractBed	intrn	179864	180022	.	-	.	Parent=CGI_10019607;
	scaffold1889	WUBlastX	DNA_Academ	179864	181105	617	+	.	.
scaffold1889	subtractBed	intrn	202020	202072	.	-	.	Parent=CGI_10019608;
	scaffold1889	TRF	Tandem_Repeat	202020	202072	99	+	.	.
scaffold1889	subtractBed	intrn	203744	203808	.	-	.	Parent=CGI_10019608;
	scaffold1889	TRF	Tandem_Repeat	203744	203808	130	+	.	.
scaffold1889	subtractBed	intrn	207440	207661	.	-	.	Parent=CGI_10019608;
	scaffold1889	WUBlastX	LINE_RTE-X	207440	207661	88	+	.	.
scaffold1889	subtractBed	intrn	207443	207613	.	-	.	Parent=CGI_10019608;
	scaffold1889	WUBlastX	LINE_RTE-X	207443	207613	103	+	.	.
scaffold1889	subtractBed	intrn	207443	207718	.	-	.	Parent=CGI_10019608;
	scaffold1889	WUBlastX	LINE_RTE-X	207443	207718	45	+	.	.
scaffold1889	subtractBed	intrn	210147	210359	.	+	.	Parent=CGI_10019609;
	scaffold1889	TRF	Tandem_Repeat	210147	210359	336	+	.	.
scaffold1889	subtractBed	intrn	219555	219610	.	-	.	Parent=CGI_10019610;
	scaffold1889	TRF	Tandem_Repeat	219555	219610	112	+	.	.
scaffold1889	subtractBed	intrn	251121	251172	.	-	.	Parent=CGI_10019611;
	scaffold1889	TRF	Tandem_Repeat	251121	251172	104	+	.	.
scaffold1889	subtractBed	intrn	262732	262770	.	-	.	Parent=CGI_10019611;
	scaffold1889	TRF	Tandem_Repeat	262732	262770	64	+	.	.
scaffold1889	subtractBed	intrn	288254	289088	.	-	.	Parent=CGI_10019612;
	scaffold1889	TRF	Tandem_Repeat	288254	289088	1435	+	.	.
scaffold1889	subtractBed	intrn	361562	361628	.	-	.	Parent=CGI_10019616;
	scaffold1889	TRF	Tandem_Repeat	361562	361628	80	+	.	.
scaffold1889	subtractBed	intrn	449497	449727	.	+	.	Parent=CGI_10019619;
	scaffold1889	TRF	Tandem_Repeat	449479	449727	158	+	.	.
scaffold1889	subtractBed	intrn	460242	460998	.	+	.	Parent=CGI_10019620;
	scaffold1889	TRF	Tandem_Repeat	460242	460998	807	+	.	.
scaffold1889	subtractBed	intrn	462084	462156	.	+	.	Parent=CGI_10019620;
	scaffold1889	TRF	Tandem_Repeat	462084	462156	58	+	.	.
scaffold1889	subtractBed	intrn	462709	462821	.	+	.	Parent=CGI_10019620;
	scaffold1889	TRF	Tandem_Repeat	462709	462821	100	+	.	.
scaffold1889	subtractBed	intrn	481349	481546	.	-	.	Parent=CGI_10019621;
	scaffold1889	TRF	Tandem_Repeat	481349	481546	288	+	.	.
scaffold1889	subtractBed	intrn	495348	495744	.	+	.	Parent=CGI_10019622;
	scaffold1889	TRF	Tandem_Repeat	495348	495744	179	+	.	.
scaffold1889	subtractBed	intrn	514738	514829	.	-	.	Parent=CGI_10019625;
	scaffold1889	TRF	Tandem_Repeat	514738	514829	62	+	.	.
scaffold1889	subtractBed	intrn	514737	515027	.	-	.	Parent=CGI_10019625;
	scaffold1889	TRF	Tandem_Repeat	514737	515027	449	+	.	.
scaffold1889	subtractBed	intrn	554565	554596	.	+	.	Parent=CGI_10019627;
	scaffold1889	TRF	Tandem_Repeat	554565	554596	55	+	.	.
scaffold1889	subtractBed	intrn	568307	568744	.	+	.	Parent=CGI_10019628;
	scaffold1889	WUBlastX	LINE_CR1	568307	568744	141	+	.	.
scaffold189	subtractBed	intrn	29585	29712	.	+	.	Parent=CGI_10018663;
	scaffold189	TRF	Tandem_Repeat	29585	29712	103	+	.	.
scaffold189	subtractBed	intrn	37439	37531	.	+	.	Parent=CGI_10018663;
	scaffold189	WUBlastX	LTR_Ngaro	37439	37531	61	-	.	.
scaffold189	subtractBed	intrn	37230	37436	.	+	.	Parent=CGI_10018663;
	scaffold189	WUBlastX	LTR_Gypsy	37230	37436	85	-	.	.
scaffold189	subtractBed	intrn	36819	37382	.	+	.	Parent=CGI_10018663;
	scaffold189	WUBlastX	LTR_Gypsy	36819	37382	200	-	.	.
scaffold189	subtractBed	intrn	35207	37165	.	+	.	Parent=CGI_10018663;
	scaffold189	WUBlastX	LTR_Gypsy	35207	37165	1241	-	.	.
scaffold189	subtractBed	intrn	74827	74875	.	-	.	Parent=CGI_10018668;
	scaffold189	TRF	Tandem_Repeat	74827	74875	98	+	.	.
scaffold189	subtractBed	intrn	85166	85209	.	-	.	Parent=CGI_10018669;
	scaffold189	TRF	Tandem_Repeat	85166	85209	61	+	.	.
scaffold189	subtractBed	intrn	85332	85371	.	-	.	Parent=CGI_10018669;
	scaffold189	TRF	Tandem_Repeat	85332	85371	80	+	.	.
scaffold189	subtractBed	intrn	105440	105464	.	+	.	Parent=CGI_10018670;
	scaffold189	TRF	Tandem_Repeat	105440	105464	50	+	.	.
scaffold189	subtractBed	intrn	107717	107895	.	+	.	Parent=CGI_10018670;
	scaffold189	TRF	Tandem_Repeat	107717	107911	306	+	.	.
scaffold189	subtractBed	intrn	108473	108639	.	+	.	Parent=CGI_10018670;
	scaffold189	TRF	Tandem_Repeat	108473	108639	141	+	.	.
scaffold189	subtractBed	intrn	111833	112058	.	+	.	Parent=CGI_10018670;
	scaffold189	TRF	Tandem_Repeat	111809	112058	358	+	.	.
scaffold189	subtractBed	intrn	120503	120527	.	-	.	Parent=CGI_10018671;
	scaffold189	TRF	Tandem_Repeat	120503	120527	50	+	.	.
scaffold189	subtractBed	intrn	122104	122146	.	-	.	Parent=CGI_10018671;
	scaffold189	TRF	Tandem_Repeat	122104	122146	86	+	.	.
scaffold189	subtractBed	intrn	167022	167070	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	167022	167070	98	+	.	.
scaffold189	subtractBed	intrn	167125	167155	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	167125	167155	53	+	.	.
scaffold189	subtractBed	intrn	169769	169852	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	169769	169852	55	+	.	.
scaffold189	subtractBed	intrn	171184	171857	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	171184	171857	1024	+	.	.
scaffold189	subtractBed	intrn	173884	173916	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	173884	173916	66	+	.	.
scaffold189	subtractBed	intrn	173914	173969	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	173914	173969	103	+	.	.
scaffold189	subtractBed	intrn	177833	179002	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	177833	179002	1528	+	.	.
scaffold189	subtractBed	intrn	179248	179780	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	179248	179780	484	+	.	.
scaffold189	subtractBed	intrn	179283	179778	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	179283	179778	364	+	.	.
scaffold189	subtractBed	intrn	180264	180289	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	180264	180289	52	+	.	.
scaffold189	subtractBed	intrn	182303	182868	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	182303	182868	250	+	.	.
scaffold189	subtractBed	intrn	185306	186491	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	185306	186491	1723	+	.	.
scaffold189	subtractBed	intrn	188764	192702	.	-	.	Parent=CGI_10018675;
	scaffold189	WUBlastX	LTR_Gypsy	188764	192702	3249	+	.	.
scaffold189	subtractBed	intrn	192625	192759	.	-	.	Parent=CGI_10018675;
	scaffold189	WUBlastX	LTR_Gypsy	192625	192759	35	+	.	.
scaffold189	subtractBed	intrn	197680	197727	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	197680	197727	96	+	.	.
scaffold189	subtractBed	intrn	206353	206394	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	206353	206394	50	+	.	.
scaffold189	subtractBed	intrn	203566	203964	.	-	.	Parent=CGI_10018675;
	scaffold189	WUBlastX	LINE_L1-Tx1	203566	203964	27	-	.	.
scaffold189	subtractBed	intrn	207119	207166	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	207119	207166	96	+	.	.
scaffold189	subtractBed	intrn	209686	209836	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	209686	209836	74	+	.	.
scaffold189	subtractBed	intrn	210148	210453	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	210148	210453	488	+	.	.
scaffold189	subtractBed	intrn	213585	214581	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	213585	214601	824	+	.	.
scaffold189	subtractBed	intrn	216491	216649	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	216491	216649	70	+	.	.
scaffold189	subtractBed	intrn	215815	216786	.	-	.	Parent=CGI_10018675;
	scaffold189	TRF	Tandem_Repeat	215815	216786	1155	+	.	.
scaffold189	subtractBed	intrn	269197	269940	.	-	.	Parent=CGI_10018678;
	scaffold189	TRF	Tandem_Repeat	269197	269940	1224	+	.	.
scaffold189	subtractBed	intrn	278722	280208	.	-	.	Parent=CGI_10018678;
	scaffold189	TRF	Tandem_Repeat	278722	280208	1843	+	.	.
scaffold189	subtractBed	intrn	278651	280208	.	-	.	Parent=CGI_10018678;
	scaffold189	TRF	Tandem_Repeat	278651	280208	1849	+	.	.
scaffold189	subtractBed	intrn	427395	427446	.	+	.	Parent=CGI_10018683;
	scaffold189	TRF	Tandem_Repeat	427395	427446	79	+	.	.
scaffold189	subtractBed	intrn	442536	442595	.	+	.	Parent=CGI_10018683;
	scaffold189	TRF	Tandem_Repeat	442536	442595	84	+	.	.
scaffold189	subtractBed	intrn	464617	464680	.	+	.	Parent=CGI_10018684;
	scaffold189	TRF	Tandem_Repeat	464617	464680	83	+	.	.
scaffold189	subtractBed	intrn	476916	476979	.	+	.	Parent=CGI_10018684;
	scaffold189	TRF	Tandem_Repeat	476916	476979	128	+	.	.
scaffold189	subtractBed	intrn	478834	479262	.	+	.	Parent=CGI_10018684;
	scaffold189	TRF	Tandem_Repeat	478834	479262	149	+	.	.
scaffold189	subtractBed	intrn	478828	479245	.	+	.	Parent=CGI_10018684;
	scaffold189	TRF	Tandem_Repeat	478828	479245	297	+	.	.
scaffold189	subtractBed	intrn	485039	485780	.	+	.	Parent=CGI_10018684;
	scaffold189	TRF	Tandem_Repeat	485039	485780	994	+	.	.
scaffold189	subtractBed	intrn	497513	498604	.	-	.	Parent=CGI_10018685;
	scaffold189	TRF	Tandem_Repeat	497513	498604	1832	+	.	.
scaffold189	subtractBed	intrn	499768	499807	.	-	.	Parent=CGI_10018685;
	scaffold189	TRF	Tandem_Repeat	499768	499807	80	+	.	.
scaffold189	subtractBed	intrn	500507	500538	.	-	.	Parent=CGI_10018685;
	scaffold189	TRF	Tandem_Repeat	500507	500538	64	+	.	.
scaffold189	subtractBed	intrn	517069	517170	.	+	.	Parent=CGI_10018686;
	scaffold189	TRF	Tandem_Repeat	517069	517183	212	+	.	.
scaffold189	subtractBed	intrn	520594	520933	.	+	.	Parent=CGI_10018686;
	scaffold189	TRF	Tandem_Repeat	520594	520933	515	+	.	.
scaffold189	subtractBed	intrn	559160	559190	.	-	.	Parent=CGI_10018688;
	scaffold189	TRF	Tandem_Repeat	559160	559190	62	+	.	.
scaffold1890	subtractBed	intrn	38265	38300	.	-	.	Parent=CGI_10012121;
	scaffold1890	TRF	Tandem_Repeat	38265	38300	72	+	.	.
scaffold1890	subtractBed	intrn	38300	38346	.	-	.	Parent=CGI_10012121;
	scaffold1890	TRF	Tandem_Repeat	38300	38346	67	+	.	.
scaffold1890	subtractBed	intrn	41170	41229	.	-	.	Parent=CGI_10012121;
	scaffold1890	TRF	Tandem_Repeat	41170	41229	120	+	.	.
scaffold1890	subtractBed	intrn	48995	49059	.	-	.	Parent=CGI_10012122;
	scaffold1890	TRF	Tandem_Repeat	48995	49059	130	+	.	.
scaffold1890	subtractBed	intrn	112265	112492	.	-	.	Parent=CGI_10012126;
	scaffold1890	TRF	Tandem_Repeat	112265	112492	375	+	.	.
scaffold1890	subtractBed	intrn	154129	154521	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	154129	154521	299	+	.	.
scaffold1890	subtractBed	intrn	176707	176942	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	176707	176942	286	+	.	.
scaffold1890	subtractBed	intrn	177930	178135	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	177930	178135	162	+	.	.
scaffold1890	subtractBed	intrn	177977	178166	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	177977	178166	308	+	.	.
scaffold1890	subtractBed	intrn	179323	179530	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	179323	179530	253	+	.	.
scaffold1890	subtractBed	intrn	184259	184672	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	184259	184672	398	+	.	.
scaffold1890	subtractBed	intrn	196539	196837	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	196539	196837	467	+	.	.
scaffold1890	subtractBed	intrn	203052	203111	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	203052	203111	120	+	.	.
scaffold1890	subtractBed	intrn	216020	216057	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	216020	216057	76	+	.	.
scaffold1890	subtractBed	intrn	218116	218536	.	-	.	Parent=CGI_10012129;
	scaffold1890	TRF	Tandem_Repeat	218116	218536	797	+	.	.
scaffold1890	subtractBed	intrn	259894	259919	.	-	.	Parent=CGI_10012132;
	scaffold1890	TRF	Tandem_Repeat	259894	259919	52	+	.	.
scaffold1890	subtractBed	intrn	269047	269217	.	-	.	Parent=CGI_10012132;
	scaffold1890	TRF	Tandem_Repeat	269047	269217	199	+	.	.
scaffold1890	subtractBed	intrn	270509	270739	.	-	.	Parent=CGI_10012132;
	scaffold1890	TRF	Tandem_Repeat	270509	270739	183	+	.	.
scaffold1890	subtractBed	intrn	282090	282131	.	-	.	Parent=CGI_10012133;
	scaffold1890	TRF	Tandem_Repeat	282090	282131	52	+	.	.
scaffold1890	subtractBed	intrn	283196	283248	.	-	.	Parent=CGI_10012134;
	scaffold1890	TRF	Tandem_Repeat	283196	283248	63	+	.	.
scaffold1890	subtractBed	intrn	292389	292525	.	-	.	Parent=CGI_10012135;
	scaffold1890	TRF	Tandem_Repeat	292389	292525	229	+	.	.
scaffold1890	subtractBed	intrn	292411	292551	.	-	.	Parent=CGI_10012135;
	scaffold1890	TRF	Tandem_Repeat	292411	292551	138	+	.	.
scaffold1890	subtractBed	intrn	299808	299843	.	-	.	Parent=CGI_10012135;
	scaffold1890	TRF	Tandem_Repeat	299808	299843	72	+	.	.
scaffold1890	subtractBed	intrn	302684	302726	.	-	.	Parent=CGI_10012135;
	scaffold1890	TRF	Tandem_Repeat	302684	302726	77	+	.	.
scaffold1890	subtractBed	intrn	305912	305972	.	-	.	Parent=CGI_10012135;
	scaffold1890	TRF	Tandem_Repeat	305912	305972	51	+	.	.
scaffold1891	subtractBed	intrn	21162	21268	.	-	.	Parent=CGI_10008725;
	scaffold1891	TRF	Tandem_Repeat	21162	21268	51	+	.	.
scaffold1891	subtractBed	intrn	21301	21379	.	-	.	Parent=CGI_10008725;
	scaffold1891	TRF	Tandem_Repeat	21301	21379	59	+	.	.
scaffold1891	subtractBed	intrn	23956	23997	.	-	.	Parent=CGI_10008725;
	scaffold1891	TRF	Tandem_Repeat	23956	23997	84	+	.	.
scaffold1891	subtractBed	intrn	38993	39018	.	-	.	Parent=CGI_10008725;
	scaffold1891	TRF	Tandem_Repeat	38993	39018	52	+	.	.
scaffold1891	subtractBed	intrn	66509	66556	.	-	.	Parent=CGI_10008729;
	scaffold1891	TRF	Tandem_Repeat	66509	66556	60	+	.	.
scaffold1891	subtractBed	intrn	66509	66556	.	+	.	Parent=CGI_10008730;
	scaffold1891	TRF	Tandem_Repeat	66509	66556	60	+	.	.
scaffold1891	subtractBed	intrn	101558	101884	.	+	.	Parent=CGI_10008734;
	scaffold1891	WUBlastX	DNA_Crypton	101558	101884	44	-	.	.
scaffold1891	subtractBed	intrn	128496	128545	.	-	.	Parent=CGI_10008736;
	scaffold1891	TRF	Tandem_Repeat	128496	128545	79	+	.	.
scaffold1891	subtractBed	intrn	137682	137707	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	137682	137707	52	+	.	.
scaffold1891	subtractBed	intrn	139788	139880	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	139788	139880	71	+	.	.
scaffold1891	subtractBed	intrn	142896	142939	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	142896	142939	88	+	.	.
scaffold1891	subtractBed	intrn	143386	143437	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	143386	143437	104	+	.	.
scaffold1891	subtractBed	intrn	147032	147193	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	147032	147193	58	+	.	.
scaffold1891	subtractBed	intrn	151332	151397	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	151332	151397	132	+	.	.
scaffold1891	subtractBed	intrn	155345	155399	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	155345	155399	110	+	.	.
scaffold1891	subtractBed	intrn	157020	157079	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	157020	157079	120	+	.	.
scaffold1891	subtractBed	intrn	157705	157736	.	-	.	Parent=CGI_10008737;
	scaffold1891	TRF	Tandem_Repeat	157705	157736	64	+	.	.
scaffold1891	subtractBed	intrn	151086	151211	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	151086	151211	29	-	.	.
scaffold1891	subtractBed	intrn	152059	152469	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	152059	152469	88	-	.	.
scaffold1891	subtractBed	intrn	150618	150716	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	150618	150716	27	-	.	.
scaffold1891	subtractBed	intrn	150850	151023	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	150850	151023	123	-	.	.
scaffold1891	subtractBed	intrn	151432	151554	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	151432	151554	75	-	.	.
scaffold1891	subtractBed	intrn	151116	151211	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	151116	151211	46	-	.	.
scaffold1891	subtractBed	intrn	151411	151569	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	151411	151569	37	-	.	.
scaffold1891	subtractBed	intrn	152089	152433	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	152089	152433	129	-	.	.
scaffold1891	subtractBed	intrn	151134	151250	.	-	.	Parent=CGI_10008737;
	scaffold1891	WUBlastX	DNA_Harbinger	151134	151250	47	-	.	.
scaffold1892	subtractBed	intrn	32923	33015	.	-	.	Parent=CGI_10011305;
	scaffold1892	WUBlastX	DNA_hAT-Ac	32923	33015	98	+	.	.
scaffold1892	subtractBed	intrn	73028	73101	.	-	.	Parent=CGI_10011309;
	scaffold1892	TRF	Tandem_Repeat	73028	73101	78	+	.	.
scaffold1892	subtractBed	intrn	73029	73103	.	-	.	Parent=CGI_10011309;
	scaffold1892	TRF	Tandem_Repeat	73029	73103	66	+	.	.
scaffold1892	subtractBed	intrn	73028	73112	.	-	.	Parent=CGI_10011309;
	scaffold1892	TRF	Tandem_Repeat	73028	73112	59	+	.	.
scaffold1892	subtractBed	intrn	81431	81478	.	-	.	Parent=CGI_10011309;
	scaffold1892	TRF	Tandem_Repeat	81431	81478	96	+	.	.
scaffold1892	subtractBed	intrn	131498	132310	.	-	.	Parent=CGI_10011314;
	scaffold1892	WUBlastX	DNA_hAT-hAT5	131498	132310	104	-	.	.
scaffold1892	subtractBed	intrn	191193	191416	.	+	.	Parent=CGI_10011318;
	scaffold1892	TRF	Tandem_Repeat	191193	191416	203	+	.	.
scaffold1892	subtractBed	intrn	193820	193852	.	+	.	Parent=CGI_10011318;
	scaffold1892	TRF	Tandem_Repeat	193820	193852	57	+	.	.
scaffold1892	subtractBed	intrn	193820	193852	.	-	.	Parent=CGI_10011319;
	scaffold1892	TRF	Tandem_Repeat	193820	193852	57	+	.	.
scaffold1892	subtractBed	intrn	229882	229999	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	229882	229999	202	+	.	.
scaffold1892	subtractBed	intrn	232739	232837	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	232739	232837	83	+	.	.
scaffold1892	subtractBed	intrn	233223	233844	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	233223	233844	844	+	.	.
scaffold1892	subtractBed	intrn	237786	237994	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	237786	237994	238	+	.	.
scaffold1892	subtractBed	intrn	242208	242247	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	242208	242247	80	+	.	.
scaffold1892	subtractBed	intrn	248200	248979	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	248200	248979	500	+	.	.
scaffold1892	subtractBed	intrn	248199	248979	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	248199	248979	595	+	.	.
scaffold1892	subtractBed	intrn	248199	248950	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	248199	248950	695	+	.	.
scaffold1892	subtractBed	intrn	248199	248950	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	248199	248950	336	+	.	.
scaffold1892	subtractBed	intrn	255274	255304	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	255274	255304	62	+	.	.
scaffold1892	subtractBed	intrn	264031	264650	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	264031	264650	896	+	.	.
scaffold1892	subtractBed	intrn	264031	264650	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	264031	264650	900	+	.	.
scaffold1892	subtractBed	intrn	269995	271078	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	269995	271078	1338	+	.	.
scaffold1892	subtractBed	intrn	272853	272903	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	272853	272903	86	+	.	.
scaffold1892	subtractBed	intrn	272845	272902	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	272845	272902	64	+	.	.
scaffold1892	subtractBed	intrn	272842	272903	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	272842	272903	72	+	.	.
scaffold1892	subtractBed	intrn	275008	275210	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	275008	275210	181	+	.	.
scaffold1892	subtractBed	intrn	274951	275210	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	274951	275210	238	+	.	.
scaffold1892	subtractBed	intrn	276727	276906	.	-	.	Parent=CGI_10011321;
	scaffold1892	TRF	Tandem_Repeat	276727	276906	198	+	.	.
scaffold1893	subtractBed	intrn	55613	56495	.	-	.	Parent=CGI_10008849;
	scaffold1893	TRF	Tandem_Repeat	55613	56495	1294	+	.	.
scaffold1893	subtractBed	intrn	73605	73632	.	-	.	Parent=CGI_10008850;
	scaffold1893	TRF	Tandem_Repeat	73605	73632	56	+	.	.
scaffold1893	subtractBed	intrn	94109	94333	.	+	.	Parent=CGI_10008854;
	scaffold1893	TRF	Tandem_Repeat	94109	94333	282	+	.	.
scaffold1893	subtractBed	intrn	94065	94232	.	+	.	Parent=CGI_10008854;
	scaffold1893	TRF	Tandem_Repeat	94061	94232	103	+	.	.
scaffold1893	subtractBed	intrn	110324	111276	.	-	.	Parent=CGI_10008856;
	scaffold1893	TRF	Tandem_Repeat	110324	111276	1347	+	.	.
scaffold1893	subtractBed	intrn	111422	112439	.	-	.	Parent=CGI_10008856;
	scaffold1893	TRF	Tandem_Repeat	111422	112439	1525	+	.	.
scaffold1893	subtractBed	intrn	117163	117276	.	-	.	Parent=CGI_10008856;
	scaffold1893	TRF	Tandem_Repeat	117163	117276	212	+	.	.
scaffold1893	subtractBed	intrn	132211	132238	.	-	.	Parent=CGI_10008857;
	scaffold1893	TRF	Tandem_Repeat	132211	132238	56	+	.	.
scaffold1893	subtractBed	intrn	154038	154359	.	+	.	Parent=CGI_10008858;
	scaffold1893	TRF	Tandem_Repeat	154038	154359	301	+	.	.
scaffold1893	subtractBed	intrn	188878	188976	.	+	.	Parent=CGI_10008860;
	scaffold1893	TRF	Tandem_Repeat	188878	188976	153	+	.	.
scaffold1893	subtractBed	intrn	191808	191851	.	+	.	Parent=CGI_10008860;
	scaffold1893	TRF	Tandem_Repeat	191808	191851	72	+	.	.
scaffold1893	subtractBed	intrn	193706	193746	.	+	.	Parent=CGI_10008860;
	scaffold1893	TRF	Tandem_Repeat	193706	193746	50	+	.	.
scaffold1893	subtractBed	intrn	193697	193830	.	+	.	Parent=CGI_10008860;
	scaffold1893	TRF	Tandem_Repeat	193697	193830	74	+	.	.
scaffold1893	subtractBed	intrn	203398	203583	.	+	.	Parent=CGI_10008861;
	scaffold1893	WUBlastX	DNA_IS4EU	203398	203583	37	-	.	.
scaffold1893	subtractBed	intrn	200591	201550	.	+	.	Parent=CGI_10008861;
	scaffold1893	WUBlastX	DNA_IS4EU	200591	201550	483	+	.	.
scaffold1893	subtractBed	intrn	203068	203232	.	+	.	Parent=CGI_10008861;
	scaffold1893	WUBlastX	DNA_Kolobok-IS4	203068	203232	36	-	.	.
scaffold1893	subtractBed	intrn	202361	203050	.	+	.	Parent=CGI_10008861;
	scaffold1893	WUBlastX	DNA_Kolobok-IS4	202361	203050	205	-	.	.
scaffold1894	subtractBed	intrn	22034	22076	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	22034	22076	86	+	.	.
scaffold1894	subtractBed	intrn	23765	23810	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	23765	23810	74	+	.	.
scaffold1894	subtractBed	intrn	25759	25794	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	25759	25794	54	+	.	.
scaffold1894	subtractBed	intrn	28230	28264	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	28230	28264	56	+	.	.
scaffold1894	subtractBed	intrn	40585	40625	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	40585	40625	82	+	.	.
scaffold1894	subtractBed	intrn	42057	42506	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1-Tx1	42057	42506	124	-	.	.
scaffold1894	subtractBed	intrn	41994	42530	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1-Tx1	41994	42530	51	-	.	.
scaffold1894	subtractBed	intrn	40775	41068	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1-Tx1	40775	41068	47	-	.	.
scaffold1894	subtractBed	intrn	40865	41185	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1	40865	41185	44	-	.	.
scaffold1894	subtractBed	intrn	41620	41796	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1	41620	41796	45	-	.	.
scaffold1894	subtractBed	intrn	41668	41901	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1-Tx1	41668	41901	44	-	.	.
scaffold1894	subtractBed	intrn	40778	40993	.	-	.	Parent=CGI_10013334;
	scaffold1894	WUBlastX	LINE_L1-Tx1	40778	40993	54	-	.	.
scaffold1894	subtractBed	intrn	48646	48685	.	-	.	Parent=CGI_10013334;
	scaffold1894	TRF	Tandem_Repeat	48646	48685	80	+	.	.
scaffold1894	subtractBed	intrn	108586	108626	.	+	.	Parent=CGI_10013336;
	scaffold1894	TRF	Tandem_Repeat	108586	108626	82	+	.	.
scaffold1894	subtractBed	intrn	121240	121280	.	+	.	Parent=CGI_10013336;
	scaffold1894	TRF	Tandem_Repeat	121240	121280	82	+	.	.
scaffold1894	subtractBed	intrn	240254	240288	.	+	.	Parent=CGI_10013340;
	scaffold1894	TRF	Tandem_Repeat	240254	240288	70	+	.	.
scaffold1894	subtractBed	intrn	252228	252394	.	+	.	Parent=CGI_10013340;
	scaffold1894	TRF	Tandem_Repeat	252228	252394	141	+	.	.
scaffold1894	subtractBed	intrn	252429	252565	.	+	.	Parent=CGI_10013340;
	scaffold1894	TRF	Tandem_Repeat	252429	252565	152	+	.	.
scaffold1894	subtractBed	intrn	313904	313937	.	+	.	Parent=CGI_10013342;
	scaffold1894	TRF	Tandem_Repeat	313904	313937	68	+	.	.
scaffold1894	subtractBed	intrn	314559	314609	.	+	.	Parent=CGI_10013342;
	scaffold1894	TRF	Tandem_Repeat	314559	314609	102	+	.	.
scaffold1894	subtractBed	intrn	318836	319531	.	+	.	Parent=CGI_10013342;
	scaffold1894	WUBlastX	LINE_L1-Tx1	318836	319531	37	-	.	.
scaffold1894	subtractBed	intrn	318567	318827	.	+	.	Parent=CGI_10013342;
	scaffold1894	WUBlastX	LINE_L1-Tx1	318567	318827	25	-	.	.
scaffold1894	subtractBed	intrn	318833	319354	.	+	.	Parent=CGI_10013342;
	scaffold1894	WUBlastX	LINE_L1-Tx1	318833	319354	128	-	.	.
scaffold1895	subtractBed	intrn	6161	6203	.	+	.	Parent=CGI_10010968;
	scaffold1895	TRF	Tandem_Repeat	6161	6203	86	+	.	.
scaffold1895	subtractBed	intrn	14560	15588	.	-	.	Parent=CGI_10010969;
	scaffold1895	TRF	Tandem_Repeat	14560	15588	1263	+	.	.
scaffold1895	subtractBed	intrn	22871	23132	.	-	.	Parent=CGI_10010969;
	scaffold1895	WUBlastX	LINE_L1-Tx1	22871	23146	64	+	.	.
scaffold1895	subtractBed	intrn	22871	23002	.	-	.	Parent=CGI_10010969;
	scaffold1895	WUBlastX	LINE_L1-Tx1	22871	23002	68	+	.	.
scaffold1895	subtractBed	intrn	32325	32386	.	-	.	Parent=CGI_10010969;
	scaffold1895	TRF	Tandem_Repeat	32325	32386	72	+	.	.
scaffold1895	subtractBed	intrn	55713	55829	.	-	.	Parent=CGI_10010973;
	scaffold1895	TRF	Tandem_Repeat	55713	55829	82	+	.	.
scaffold1895	subtractBed	intrn	90128	90261	.	-	.	Parent=CGI_10010977;
	scaffold1895	TRF	Tandem_Repeat	90128	90261	236	+	.	.
scaffold1895	subtractBed	intrn	105166	105542	.	-	.	Parent=CGI_10010977;
	scaffold1895	TRF	Tandem_Repeat	105166	105558	209	+	.	.
scaffold1895	subtractBed	intrn	105166	105542	.	-	.	Parent=CGI_10010977;
	scaffold1895	TRF	Tandem_Repeat	105166	105558	265	+	.	.
scaffold1895	subtractBed	intrn	113067	113290	.	-	.	Parent=CGI_10010977;
	scaffold1895	TRF	Tandem_Repeat	113067	113290	362	+	.	.
scaffold1895	subtractBed	intrn	133039	135228	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	133039	135228	3066	+	.	.
scaffold1895	subtractBed	intrn	133233	135093	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	133233	135093	2872	+	.	.
scaffold1895	subtractBed	intrn	142454	142527	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	142454	142527	70	+	.	.
scaffold1895	subtractBed	intrn	142454	142526	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	142454	142526	73	+	.	.
scaffold1895	subtractBed	intrn	142427	142526	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	142427	142526	91	+	.	.
scaffold1895	subtractBed	intrn	142454	142514	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	142454	142514	72	+	.	.
scaffold1895	subtractBed	intrn	142427	142529	.	-	.	Parent=CGI_10010979;
	scaffold1895	TRF	Tandem_Repeat	142427	142529	59	+	.	.
scaffold1895	subtractBed	intrn	167210	167769	.	+	.	Parent=CGI_10010981;
	scaffold1895	TRF	Tandem_Repeat	167210	167769	714	+	.	.
scaffold1895	subtractBed	intrn	170303	170363	.	+	.	Parent=CGI_10010981;
	scaffold1895	TRF	Tandem_Repeat	170303	170363	104	+	.	.
scaffold1895	subtractBed	intrn	188909	189037	.	-	.	Parent=CGI_10010984;
	scaffold1895	WUBlastX	LINE_RTE-X	188909	189037	73	+	.	.
scaffold1895	subtractBed	intrn	188909	189064	.	-	.	Parent=CGI_10010984;
	scaffold1895	WUBlastX	LINE_RTE-X	188909	189064	47	+	.	.
scaffold1895	subtractBed	intrn	195855	196028	.	-	.	Parent=CGI_10010984;
	scaffold1895	TRF	Tandem_Repeat	195855	196028	321	+	.	.
scaffold1895	subtractBed	intrn	199303	199362	.	-	.	Parent=CGI_10010984;
	scaffold1895	TRF	Tandem_Repeat	199303	199362	113	+	.	.
scaffold1895	subtractBed	intrn	200185	200214	.	-	.	Parent=CGI_10010984;
	scaffold1895	TRF	Tandem_Repeat	200185	200214	51	+	.	.
scaffold1895	subtractBed	intrn	188909	189037	.	+	.	Parent=CGI_10010985;
	scaffold1895	WUBlastX	LINE_RTE-X	188909	189037	73	+	.	.
scaffold1895	subtractBed	intrn	188909	189064	.	+	.	Parent=CGI_10010985;
	scaffold1895	WUBlastX	LINE_RTE-X	188909	189064	47	+	.	.
scaffold1895	subtractBed	intrn	206438	206537	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	206438	206537	94	+	.	.
scaffold1895	subtractBed	intrn	212107	212139	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	212107	212139	66	+	.	.
scaffold1895	subtractBed	intrn	214363	214854	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	214363	214854	314	+	.	.
scaffold1895	subtractBed	intrn	214658	214912	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	214658	214912	456	+	.	.
scaffold1895	subtractBed	intrn	217269	217407	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	217269	217407	224	+	.	.
scaffold1895	subtractBed	intrn	218175	218226	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	218175	218226	104	+	.	.
scaffold1895	subtractBed	intrn	218606	218647	.	+	.	Parent=CGI_10010986;
	scaffold1895	TRF	Tandem_Repeat	218606	218647	84	+	.	.
scaffold1896	subtractBed	intrn	44498	44549	.	+	.	Parent=CGI_10019633;
	scaffold1896	TRF	Tandem_Repeat	44498	44549	95	+	.	.
scaffold1896	subtractBed	intrn	69252	69687	.	+	.	Parent=CGI_10019634;
	scaffold1896	TRF	Tandem_Repeat	69252	69687	598	+	.	.
scaffold1896	subtractBed	intrn	75826	75957	.	+	.	Parent=CGI_10019634;
	scaffold1896	TRF	Tandem_Repeat	75826	75957	201	+	.	.
scaffold1896	subtractBed	intrn	78008	78052	.	+	.	Parent=CGI_10019634;
	scaffold1896	TRF	Tandem_Repeat	78008	78052	90	+	.	.
scaffold1896	subtractBed	intrn	77999	78056	.	+	.	Parent=CGI_10019634;
	scaffold1896	TRF	Tandem_Repeat	77999	78056	71	+	.	.
scaffold1896	subtractBed	intrn	131944	131993	.	-	.	Parent=CGI_10019635;
	scaffold1896	TRF	Tandem_Repeat	131944	131993	100	+	.	.
scaffold1896	subtractBed	intrn	137150	137885	.	-	.	Parent=CGI_10019635;
	scaffold1896	TRF	Tandem_Repeat	137150	137885	1040	+	.	.
scaffold1896	subtractBed	intrn	148163	148192	.	-	.	Parent=CGI_10019635;
	scaffold1896	TRF	Tandem_Repeat	148163	148192	51	+	.	.
scaffold1896	subtractBed	intrn	148270	148299	.	-	.	Parent=CGI_10019635;
	scaffold1896	TRF	Tandem_Repeat	148270	148299	51	+	.	.
scaffold1896	subtractBed	intrn	150167	150664	.	-	.	Parent=CGI_10019635;
	scaffold1896	WUBlastX	LINE_L2	150167	150664	128	-	.	.
scaffold1896	subtractBed	intrn	170118	170149	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	170118	170149	64	+	.	.
scaffold1896	subtractBed	intrn	176115	176164	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	176115	176164	75	+	.	.
scaffold1896	subtractBed	intrn	176551	176594	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	176551	176594	88	+	.	.
scaffold1896	subtractBed	intrn	178051	178104	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	178051	178104	99	+	.	.
scaffold1896	subtractBed	intrn	186277	186320	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	186277	186320	88	+	.	.
scaffold1896	subtractBed	intrn	187016	187417	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	187016	187417	517	+	.	.
scaffold1896	subtractBed	intrn	198967	199016	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	198967	199016	82	+	.	.
scaffold1896	subtractBed	intrn	204905	205110	.	-	.	Parent=CGI_10019636;
	scaffold1896	TRF	Tandem_Repeat	204905	205110	198	+	.	.
scaffold1896	subtractBed	intrn	279902	279971	.	+	.	Parent=CGI_10019638;
	scaffold1896	TRF	Tandem_Repeat	279902	279971	95	+	.	.
scaffold1896	subtractBed	intrn	279832	280198	.	+	.	Parent=CGI_10019638;
	scaffold1896	TRF	Tandem_Repeat	279832	280198	430	+	.	.
scaffold1896	subtractBed	intrn	279902	279971	.	-	.	Parent=CGI_10019639;
	scaffold1896	TRF	Tandem_Repeat	279902	279971	95	+	.	.
scaffold1896	subtractBed	intrn	279832	280198	.	-	.	Parent=CGI_10019639;
	scaffold1896	TRF	Tandem_Repeat	279832	280198	430	+	.	.
scaffold1896	subtractBed	intrn	323422	323471	.	-	.	Parent=CGI_10019642;
	scaffold1896	TRF	Tandem_Repeat	323422	323471	100	+	.	.
scaffold1896	subtractBed	intrn	340202	340238	.	+	.	Parent=CGI_10019643;
	scaffold1896	TRF	Tandem_Repeat	340202	340238	74	+	.	.
scaffold1896	subtractBed	intrn	357515	357564	.	-	.	Parent=CGI_10019644;
	scaffold1896	TRF	Tandem_Repeat	357515	357564	100	+	.	.
scaffold1896	subtractBed	intrn	364842	364967	.	-	.	Parent=CGI_10019645;
	scaffold1896	TRF	Tandem_Repeat	364842	364967	143	+	.	.
scaffold1896	subtractBed	intrn	365215	365261	.	-	.	Parent=CGI_10019645;
	scaffold1896	TRF	Tandem_Repeat	365215	365261	94	+	.	.
scaffold1896	subtractBed	intrn	364842	364967	.	+	.	Parent=CGI_10019646;
	scaffold1896	TRF	Tandem_Repeat	364842	364967	143	+	.	.
scaffold1896	subtractBed	intrn	365215	365261	.	+	.	Parent=CGI_10019646;
	scaffold1896	TRF	Tandem_Repeat	365215	365261	94	+	.	.
scaffold1896	subtractBed	intrn	386345	386719	.	-	.	Parent=CGI_10019649;
	scaffold1896	WUBlastX	DNA_Crypton	386345	386719	59	-	.	.
scaffold1896	subtractBed	intrn	391798	392179	.	-	.	Parent=CGI_10019649;
	scaffold1896	TRF	Tandem_Repeat	391798	392179	535	+	.	.
scaffold1896	subtractBed	intrn	391798	392179	.	-	.	Parent=CGI_10019649;
	scaffold1896	TRF	Tandem_Repeat	391798	392179	535	+	.	.
scaffold1896	subtractBed	intrn	453670	453685	.	-	.	Parent=CGI_10019651;
	scaffold1896	WUBlastX	LTR_Gypsy	453614	453685	30	-	.	.
scaffold1896	subtractBed	intrn	458039	458067	.	-	.	Parent=CGI_10019651;
	scaffold1896	TRF	Tandem_Repeat	458039	458067	58	+	.	.
scaffold1896	subtractBed	intrn	485971	486243	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	485971	486243	59	+	.	.
scaffold1896	subtractBed	intrn	485843	486064	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	485843	486064	68	+	.	.
scaffold1896	subtractBed	intrn	486207	486317	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	486207	486317	48	+	.	.
scaffold1896	subtractBed	intrn	484068	485528	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	484068	485528	762	+	.	.
scaffold1896	subtractBed	intrn	483439	483717	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	483439	483717	111	+	.	.
scaffold1896	subtractBed	intrn	485453	485989	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	485453	485989	175	+	.	.
scaffold1896	subtractBed	intrn	483439	483903	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	483439	483903	68	+	.	.
scaffold1896	subtractBed	intrn	486237	486332	.	+	.	Parent=CGI_10019652;
	scaffold1896	WUBlastX	LTR_Ngaro	486237	486332	25	+	.	.
scaffold1896	subtractBed	intrn	500259	500317	.	-	.	Parent=CGI_10019653;
	scaffold1896	TRF	Tandem_Repeat	500259	500317	66	+	.	.
scaffold1896	subtractBed	intrn	500265	500326	.	-	.	Parent=CGI_10019653;
	scaffold1896	TRF	Tandem_Repeat	500265	500326	72	+	.	.
scaffold1896	subtractBed	intrn	506630	506660	.	-	.	Parent=CGI_10019653;
	scaffold1896	TRF	Tandem_Repeat	506630	506660	53	+	.	.
scaffold1896	subtractBed	intrn	511523	511581	.	-	.	Parent=CGI_10019653;
	scaffold1896	TRF	Tandem_Repeat	511523	511581	109	+	.	.
scaffold1896	subtractBed	intrn	515607	515662	.	-	.	Parent=CGI_10019653;
	scaffold1896	TRF	Tandem_Repeat	515607	515662	94	+	.	.
scaffold1896	subtractBed	intrn	536280	537051	.	+	.	Parent=CGI_10019655;
	scaffold1896	TRF	Tandem_Repeat	536280	537051	1289	+	.	.
scaffold1896	subtractBed	intrn	537244	537293	.	+	.	Parent=CGI_10019655;
	scaffold1896	TRF	Tandem_Repeat	537244	537293	66	+	.	.
scaffold1896	subtractBed	intrn	578224	578261	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	578224	578261	67	+	.	.
scaffold1896	subtractBed	intrn	579625	580129	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	579625	580129	672	+	.	.
scaffold1896	subtractBed	intrn	579625	580311	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	579625	580311	794	+	.	.
scaffold1896	subtractBed	intrn	579625	580311	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	579625	580311	794	+	.	.
scaffold1896	subtractBed	intrn	580131	580311	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	580131	580311	197	+	.	.
scaffold1896	subtractBed	intrn	583219	583372	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	583219	583372	119	+	.	.
scaffold1896	subtractBed	intrn	583187	583412	.	-	.	Parent=CGI_10019658;
	scaffold1896	TRF	Tandem_Repeat	583187	583436	446	+	.	.
scaffold1897	subtractBed	intrn	117485	117522	.	-	.	Parent=CGI_10020906;
	scaffold1897	TRF	Tandem_Repeat	117485	117522	76	+	.	.
scaffold1897	subtractBed	intrn	194147	194576	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	194147	194576	572	+	.	.
scaffold1897	subtractBed	intrn	198132	198193	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	198132	198193	117	+	.	.
scaffold1897	subtractBed	intrn	202122	202281	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	202122	202281	176	+	.	.
scaffold1897	subtractBed	intrn	203850	203899	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	203850	203899	64	+	.	.
scaffold1897	subtractBed	intrn	210510	210559	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	210510	210559	100	+	.	.
scaffold1897	subtractBed	intrn	200054	200644	.	-	.	Parent=CGI_10020917;
	scaffold1897	WUBlastX	LINE_CR1	200054	200644	104	+	.	.
scaffold1897	subtractBed	intrn	200171	201295	.	-	.	Parent=CGI_10020917;
	scaffold1897	WUBlastX	LINE_RTE-X	200171	201295	333	+	.	.
scaffold1897	subtractBed	intrn	201296	201643	.	-	.	Parent=CGI_10020917;
	scaffold1897	WUBlastX	LINE_RTE-X	201296	201643	69	+	.	.
scaffold1897	subtractBed	intrn	201622	201771	.	-	.	Parent=CGI_10020917;
	scaffold1897	WUBlastX	LINE_RTE-X	201622	201771	50	+	.	.
scaffold1897	subtractBed	intrn	201610	201840	.	-	.	Parent=CGI_10020917;
	scaffold1897	WUBlastX	LINE_RTE-X	201610	201840	41	+	.	.
scaffold1897	subtractBed	intrn	218822	219211	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	218822	219218	370	+	.	.
scaffold1897	subtractBed	intrn	218822	219211	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	218822	219218	286	+	.	.
scaffold1897	subtractBed	intrn	222286	222330	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	222286	222330	54	+	.	.
scaffold1897	subtractBed	intrn	222287	222330	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	222287	222330	61	+	.	.
scaffold1897	subtractBed	intrn	222448	222817	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	222448	222817	287	+	.	.
scaffold1897	subtractBed	intrn	222448	222817	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	222448	222817	357	+	.	.
scaffold1897	subtractBed	intrn	234486	234799	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	234486	234823	388	+	.	.
scaffold1897	subtractBed	intrn	235230	235296	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	235230	235296	107	+	.	.
scaffold1897	subtractBed	intrn	239753	240715	.	-	.	Parent=CGI_10020917;
	scaffold1897	TRF	Tandem_Repeat	239753	240715	1351	+	.	.
scaffold1897	subtractBed	intrn	259225	259294	.	-	.	Parent=CGI_10020918;
	scaffold1897	TRF	Tandem_Repeat	259225	259294	140	+	.	.
scaffold1897	subtractBed	intrn	262547	262624	.	-	.	Parent=CGI_10020918;
	scaffold1897	TRF	Tandem_Repeat	262547	262624	156	+	.	.
scaffold1897	subtractBed	intrn	266929	266999	.	+	.	Parent=CGI_10020919;
	scaffold1897	TRF	Tandem_Repeat	266929	266999	142	+	.	.
scaffold1897	subtractBed	intrn	268985	269056	.	+	.	Parent=CGI_10020919;
	scaffold1897	TRF	Tandem_Repeat	268985	269056	65	+	.	.
scaffold1897	subtractBed	intrn	280886	280936	.	+	.	Parent=CGI_10020920;
	scaffold1897	TRF	Tandem_Repeat	280886	280936	102	+	.	.
scaffold1897	subtractBed	intrn	282606	282683	.	+	.	Parent=CGI_10020920;
	scaffold1897	TRF	Tandem_Repeat	282606	282683	147	+	.	.
scaffold1897	subtractBed	intrn	311433	311591	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	311433	311591	210	+	.	.
scaffold1897	subtractBed	intrn	311617	311804	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	311617	311804	243	+	.	.
scaffold1897	subtractBed	intrn	311617	311806	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	311617	311806	150	+	.	.
scaffold1897	subtractBed	intrn	311884	311970	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	311884	311970	106	+	.	.
scaffold1897	subtractBed	intrn	314618	314776	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	314618	314776	210	+	.	.
scaffold1897	subtractBed	intrn	314802	314989	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	314802	314989	243	+	.	.
scaffold1897	subtractBed	intrn	314802	314991	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	314802	314991	150	+	.	.
scaffold1897	subtractBed	intrn	315069	315155	.	-	.	Parent=CGI_10020922;
	scaffold1897	TRF	Tandem_Repeat	315069	315155	106	+	.	.
scaffold1897	subtractBed	intrn	331383	331430	.	+	.	Parent=CGI_10020924;
	scaffold1897	TRF	Tandem_Repeat	331383	331430	78	+	.	.
scaffold1897	subtractBed	intrn	335296	335337	.	+	.	Parent=CGI_10020925;
	scaffold1897	TRF	Tandem_Repeat	335296	335337	84	+	.	.
scaffold1897	subtractBed	intrn	340697	340722	.	+	.	Parent=CGI_10020925;
	scaffold1897	TRF	Tandem_Repeat	340697	340722	52	+	.	.
scaffold1897	subtractBed	intrn	340722	340770	.	+	.	Parent=CGI_10020925;
	scaffold1897	TRF	Tandem_Repeat	340722	340770	98	+	.	.
scaffold1897	subtractBed	intrn	375340	375377	.	+	.	Parent=CGI_10020927;
	scaffold1897	TRF	Tandem_Repeat	375340	375377	58	+	.	.
scaffold1897	subtractBed	intrn	384676	384746	.	-	.	Parent=CGI_10020928;
	scaffold1897	TRF	Tandem_Repeat	384676	384746	64	+	.	.
scaffold1897	subtractBed	intrn	384692	384829	.	-	.	Parent=CGI_10020928;
	scaffold1897	TRF	Tandem_Repeat	384692	384829	77	+	.	.
scaffold1897	subtractBed	intrn	384676	384746	.	-	.	Parent=CGI_10020928;
	scaffold1897	TRF	Tandem_Repeat	384676	384746	67	+	.	.
scaffold1897	subtractBed	intrn	384674	384756	.	-	.	Parent=CGI_10020928;
	scaffold1897	TRF	Tandem_Repeat	384674	384756	59	+	.	.
scaffold1897	subtractBed	intrn	384613	384760	.	-	.	Parent=CGI_10020928;
	scaffold1897	TRF	Tandem_Repeat	384613	384760	67	+	.	.
scaffold1897	subtractBed	intrn	451017	451065	.	+	.	Parent=CGI_10020932;
	scaffold1897	TRF	Tandem_Repeat	451017	451065	75	+	.	.
scaffold1897	subtractBed	intrn	465061	465104	.	-	.	Parent=CGI_10020933;
	scaffold1897	TRF	Tandem_Repeat	465061	465104	56	+	.	.
scaffold1897	subtractBed	intrn	480290	480372	.	-	.	Parent=CGI_10020933;
	scaffold1897	TRF	Tandem_Repeat	480290	480372	112	+	.	.
scaffold1897	subtractBed	intrn	484899	484976	.	-	.	Parent=CGI_10020933;
	scaffold1897	TRF	Tandem_Repeat	484899	484976	129	+	.	.
scaffold1897	subtractBed	intrn	480290	480372	.	+	.	Parent=CGI_10020934;
	scaffold1897	TRF	Tandem_Repeat	480290	480372	112	+	.	.
scaffold1897	subtractBed	intrn	484899	484976	.	+	.	Parent=CGI_10020934;
	scaffold1897	TRF	Tandem_Repeat	484899	484976	129	+	.	.
scaffold1897	subtractBed	intrn	493697	493737	.	+	.	Parent=CGI_10020934;
	scaffold1897	TRF	Tandem_Repeat	493697	493737	82	+	.	.
scaffold1897	subtractBed	intrn	504244	504269	.	+	.	Parent=CGI_10020934;
	scaffold1897	TRF	Tandem_Repeat	504244	504269	52	+	.	.
scaffold1897	subtractBed	intrn	548419	548465	.	-	.	Parent=CGI_10020938;
	scaffold1897	TRF	Tandem_Repeat	548419	548465	85	+	.	.
scaffold1897	subtractBed	intrn	550201	550239	.	-	.	Parent=CGI_10020938;
	scaffold1897	TRF	Tandem_Repeat	550201	550239	78	+	.	.
scaffold1897	subtractBed	intrn	551558	552155	.	-	.	Parent=CGI_10020938;
	scaffold1897	TRF	Tandem_Repeat	551558	552155	780	+	.	.
scaffold1898	subtractBed	intrn	26045	26084	.	-	.	Parent=CGI_10012204;
	scaffold1898	TRF	Tandem_Repeat	26045	26084	80	+	.	.
scaffold1898	subtractBed	intrn	26212	26257	.	-	.	Parent=CGI_10012204;
	scaffold1898	TRF	Tandem_Repeat	26212	26257	92	+	.	.
scaffold1898	subtractBed	intrn	27095	27321	.	-	.	Parent=CGI_10012204;
	scaffold1898	TRF	Tandem_Repeat	27095	27321	400	+	.	.
scaffold1898	subtractBed	intrn	31474	31553	.	-	.	Parent=CGI_10012204;
	scaffold1898	TRF	Tandem_Repeat	31474	31553	151	+	.	.
scaffold1898	subtractBed	intrn	53180	53332	.	+	.	Parent=CGI_10012206;
	scaffold1898	WUBlastX	DNA_hAT-Ac	53180	53332	49	-	.	.
scaffold1898	subtractBed	intrn	53180	53332	.	-	.	Parent=CGI_10012207;
	scaffold1898	WUBlastX	DNA_hAT-Ac	53180	53332	49	-	.	.
scaffold1898	subtractBed	intrn	58849	59052	.	-	.	Parent=CGI_10012207;
	scaffold1898	TRF	Tandem_Repeat	58849	59052	237	+	.	.
scaffold1898	subtractBed	intrn	292021	292050	.	-	.	Parent=CGI_10012219;
	scaffold1898	TRF	Tandem_Repeat	292021	292050	51	+	.	.
scaffold1898	subtractBed	intrn	308370	308408	.	+	.	Parent=CGI_10012220;
	scaffold1898	TRF	Tandem_Repeat	308370	308408	78	+	.	.
scaffold1898	subtractBed	intrn	309203	309916	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	309203	309916	673	-	.	.
scaffold1898	subtractBed	intrn	309913	310449	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	309913	310449	247	-	.	.
scaffold1898	subtractBed	intrn	310641	310742	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	310641	310742	35	-	.	.
scaffold1898	subtractBed	intrn	310587	310769	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	310587	310769	21	-	.	.
scaffold1898	subtractBed	intrn	311637	312104	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	311637	312104	135	-	.	.
scaffold1898	subtractBed	intrn	312140	312553	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	312140	312553	100	-	.	.
scaffold1898	subtractBed	intrn	311712	312143	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	311712	312143	379	-	.	.
scaffold1898	subtractBed	intrn	311606	311746	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	311606	311746	127	-	.	.
scaffold1898	subtractBed	intrn	312140	312454	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	312140	312454	173	-	.	.
scaffold1898	subtractBed	intrn	310744	311604	.	+	.	Parent=CGI_10012220;
	scaffold1898	WUBlastX	LTR_Pao	310744	311604	663	-	.	.
scaffold1899	subtractBed	intrn	101222	101331	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	101222	101331	148	+	.	.
scaffold1899	subtractBed	intrn	101437	101757	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	101437	101757	245	+	.	.
scaffold1899	subtractBed	intrn	102550	103416	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	102550	103416	1484	+	.	.
scaffold1899	subtractBed	intrn	104967	105978	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	104967	105978	758	+	.	.
scaffold1899	subtractBed	intrn	104967	105978	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	104967	105978	838	+	.	.
scaffold1899	subtractBed	intrn	123026	123066	.	-	.	Parent=CGI_10013612;
	scaffold1899	TRF	Tandem_Repeat	123026	123066	73	+	.	.
scaffold1899	subtractBed	intrn	231785	232249	.	-	.	Parent=CGI_10013614;
	scaffold1899	TRF	Tandem_Repeat	231785	232249	528	+	.	.
scaffold1899	subtractBed	intrn	233535	233627	.	-	.	Parent=CGI_10013614;
	scaffold1899	WUBlastX	LINE_RTE-BovB	233535	233627	38	+	.	.
scaffold1899	subtractBed	intrn	233632	234381	.	-	.	Parent=CGI_10013614;
	scaffold1899	WUBlastX	LINE_RTE-BovB	233632	234381	161	+	.	.
scaffold1899	subtractBed	intrn	259230	259328	.	-	.	Parent=CGI_10013616;
	scaffold1899	WUBlastX	LINE_R2-Hero	259230	259328	24	-	.	.
scaffold1899	subtractBed	intrn	257135	258826	.	-	.	Parent=CGI_10013616;
	scaffold1899	WUBlastX	LINE_R2-Hero	257135	258826	628	-	.	.
scaffold1899	subtractBed	intrn	260580	260627	.	-	.	Parent=CGI_10013616;
	scaffold1899	TRF	Tandem_Repeat	260580	260627	96	+	.	.
scaffold1899	subtractBed	intrn	259230	259328	.	+	.	Parent=CGI_10013617;
	scaffold1899	WUBlastX	LINE_R2-Hero	259230	259328	24	-	.	.
scaffold1899	subtractBed	intrn	257135	258826	.	+	.	Parent=CGI_10013617;
	scaffold1899	WUBlastX	LINE_R2-Hero	257135	258826	628	-	.	.
scaffold1899	subtractBed	intrn	260580	260627	.	+	.	Parent=CGI_10013617;
	scaffold1899	TRF	Tandem_Repeat	260580	260627	96	+	.	.
scaffold1899	subtractBed	intrn	283589	283916	.	+	.	Parent=CGI_10013621;
	scaffold1899	TRF	Tandem_Repeat	283589	283916	448	+	.	.
scaffold1899	subtractBed	intrn	301870	302071	.	-	.	Parent=CGI_10013622;
	scaffold1899	TRF	Tandem_Repeat	301870	302076	242	+	.	.
scaffold1899	subtractBed	intrn	351212	351251	.	-	.	Parent=CGI_10013624;
	scaffold1899	TRF	Tandem_Repeat	351212	351251	53	+	.	.
scaffold1899	subtractBed	intrn	351282	352136	.	-	.	Parent=CGI_10013624;
	scaffold1899	TRF	Tandem_Repeat	351282	352136	1214	+	.	.
scaffold1899	subtractBed	intrn	344019	344080	.	-	.	Parent=CGI_10013624;
	scaffold1899	TRF	Tandem_Repeat	344019	344080	70	+	.	.
scaffold19	subtractBed	intrn	24724	24875	.	-	.	Parent=CGI_10010829;
	scaffold19	TRF	Tandem_Repeat	24724	24875	110	+	.	.
scaffold19	subtractBed	intrn	24773	25174	.	-	.	Parent=CGI_10010829;
	scaffold19	TRF	Tandem_Repeat	24773	25174	670	+	.	.
scaffold19	subtractBed	intrn	34377	35506	.	-	.	Parent=CGI_10010829;
	scaffold19	TRF	Tandem_Repeat	34377	35506	1345	+	.	.
scaffold19	subtractBed	intrn	35677	35708	.	-	.	Parent=CGI_10010829;
	scaffold19	TRF	Tandem_Repeat	35677	35708	55	+	.	.
scaffold19	subtractBed	intrn	76017	76069	.	+	.	Parent=CGI_10010832;
	scaffold19	TRF	Tandem_Repeat	76017	76069	106	+	.	.
scaffold19	subtractBed	intrn	131454	132937	.	-	.	Parent=CGI_10010836;
	scaffold19	TRF	Tandem_Repeat	131454	132937	1436	+	.	.
scaffold19	subtractBed	intrn	138732	139592	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_DIRS	138732	139592	143	-	.	.
scaffold19	subtractBed	intrn	140955	141047	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_Gypsy	140955	141047	26	-	.	.
scaffold19	subtractBed	intrn	140068	140583	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_DIRS	140068	140583	329	-	.	.
scaffold19	subtractBed	intrn	139017	139592	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_DIRS	139017	139592	196	-	.	.
scaffold19	subtractBed	intrn	139673	140113	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_DIRS	139673	140113	140	-	.	.
scaffold19	subtractBed	intrn	141409	141654	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_Gypsy	141409	141654	27	-	.	.
scaffold19	subtractBed	intrn	140068	140769	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_DIRS	140068	140769	233	-	.	.
scaffold19	subtractBed	intrn	140706	140957	.	-	.	Parent=CGI_10010836;
	scaffold19	WUBlastX	LTR_Gypsy	140706	140957	26	-	.	.
scaffold19	subtractBed	intrn	152712	153215	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152712	153215	174	-	.	.
scaffold19	subtractBed	intrn	152225	152605	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152225	152605	157	-	.	.
scaffold19	subtractBed	intrn	152712	153317	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152712	153317	96	-	.	.
scaffold19	subtractBed	intrn	152225	152536	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152225	152536	190	-	.	.
scaffold19	subtractBed	intrn	152524	152664	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152524	152664	39	-	.	.
scaffold19	subtractBed	intrn	152530	152715	.	+	.	Parent=CGI_10010837;
	scaffold19	WUBlastX	DNA_TcMar-Tc1	152530	152715	38	-	.	.
scaffold19	subtractBed	intrn	200208	200554	.	+	.	Parent=CGI_10010840;
	scaffold19	TRF	Tandem_Repeat	200208	200554	300	+	.	.
scaffold19	subtractBed	intrn	198993	199169	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	198993	199169	43	+	.	.
scaffold19	subtractBed	intrn	197615	198004	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	197615	198004	54	+	.	.
scaffold19	subtractBed	intrn	198398	198976	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	198398	198976	218	+	.	.
scaffold19	subtractBed	intrn	199349	199603	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	199349	199603	51	+	.	.
scaffold19	subtractBed	intrn	199606	200037	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	199606	200037	129	+	.	.
scaffold19	subtractBed	intrn	198999	199436	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	198999	199436	41	+	.	.
scaffold19	subtractBed	intrn	198198	198278	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	198198	198278	35	+	.	.
scaffold19	subtractBed	intrn	201080	201187	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS	201080	201187	21	+	.	.
scaffold19	subtractBed	intrn	201053	201187	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS?	201053	201187	20	+	.	.
scaffold19	subtractBed	intrn	201192	201338	.	+	.	Parent=CGI_10010840;
	scaffold19	WUBlastX	LTR_DIRS?	201192	201338	78	+	.	.
scaffold19	subtractBed	intrn	209638	209835	.	-	.	Parent=CGI_10010841;
	scaffold19	TRF	Tandem_Repeat	209638	209835	360	+	.	.
scaffold190	subtractBed	intrn	13416	13482	.	+	.	Parent=CGI_10012223;
	scaffold190	TRF	Tandem_Repeat	13416	13482	98	+	.	.
scaffold190	subtractBed	intrn	22950	23386	.	-	.	Parent=CGI_10012224;
	scaffold190	TRF	Tandem_Repeat	22950	23386	618	+	.	.
scaffold190	subtractBed	intrn	22899	23404	.	-	.	Parent=CGI_10012224;
	scaffold190	TRF	Tandem_Repeat	22899	23404	271	+	.	.
scaffold190	subtractBed	intrn	26403	26445	.	-	.	Parent=CGI_10012224;
	scaffold190	TRF	Tandem_Repeat	26403	26445	86	+	.	.
scaffold190	subtractBed	intrn	27858	28123	.	-	.	Parent=CGI_10012224;
	scaffold190	TRF	Tandem_Repeat	27858	28123	156	+	.	.
scaffold190	subtractBed	intrn	27855	28123	.	-	.	Parent=CGI_10012224;
	scaffold190	TRF	Tandem_Repeat	27855	28123	256	+	.	.
scaffold190	subtractBed	intrn	37186	37220	.	-	.	Parent=CGI_10012225;
	scaffold190	TRF	Tandem_Repeat	37186	37220	70	+	.	.
scaffold190	subtractBed	intrn	73200	73255	.	+	.	Parent=CGI_10012229;
	scaffold190	TRF	Tandem_Repeat	73200	73255	112	+	.	.
scaffold190	subtractBed	intrn	101051	101092	.	-	.	Parent=CGI_10012231;
	scaffold190	TRF	Tandem_Repeat	101051	101092	84	+	.	.
scaffold190	subtractBed	intrn	224160	224332	.	+	.	Parent=CGI_10012236;
	scaffold190	TRF	Tandem_Repeat	224160	224332	134	+	.	.
scaffold190	subtractBed	intrn	240116	240249	.	+	.	Parent=CGI_10012236;
	scaffold190	TRF	Tandem_Repeat	240116	240249	241	+	.	.
scaffold190	subtractBed	intrn	252795	253107	.	+	.	Parent=CGI_10012237;
	scaffold190	TRF	Tandem_Repeat	252795	253107	549	+	.	.
scaffold190	subtractBed	intrn	254288	254417	.	+	.	Parent=CGI_10012237;
	scaffold190	TRF	Tandem_Repeat	254288	254417	109	+	.	.
scaffold190	subtractBed	intrn	254834	255024	.	+	.	Parent=CGI_10012237;
	scaffold190	TRF	Tandem_Repeat	254834	255024	303	+	.	.
scaffold190	subtractBed	intrn	255216	255582	.	+	.	Parent=CGI_10012237;
	scaffold190	TRF	Tandem_Repeat	255178	255582	568	+	.	.
scaffold190	subtractBed	intrn	273051	273108	.	+	.	Parent=CGI_10012239;
	scaffold190	TRF	Tandem_Repeat	273051	273108	98	+	.	.
scaffold1900	subtractBed	intrn	6782	7605	.	+	.	Parent=CGI_10017321;
	scaffold1900	TRF	Tandem_Repeat	6782	7605	897	+	.	.
scaffold1900	subtractBed	intrn	6782	7605	.	-	.	Parent=CGI_10017322;
	scaffold1900	TRF	Tandem_Repeat	6782	7605	897	+	.	.
scaffold1900	subtractBed	intrn	13713	15036	.	-	.	Parent=CGI_10017322;
	scaffold1900	TRF	Tandem_Repeat	13713	15036	1381	+	.	.
scaffold1900	subtractBed	intrn	22276	22297	.	+	.	Parent=CGI_10017323;
	scaffold1900	WUBlastX	DNA_hAT	22276	22458	50	+	.	.
scaffold1900	subtractBed	intrn	46859	46912	.	+	.	Parent=CGI_10017325;
	scaffold1900	TRF	Tandem_Repeat	46859	46912	108	+	.	.
scaffold1900	subtractBed	intrn	49249	49521	.	+	.	Parent=CGI_10017325;
	scaffold1900	WUBlastX	DNA_Harbinger	49249	49521	160	-	.	.
scaffold1900	subtractBed	intrn	125937	125988	.	+	.	Parent=CGI_10017329;
	scaffold1900	TRF	Tandem_Repeat	125937	125988	104	+	.	.
scaffold1900	subtractBed	intrn	126765	126820	.	+	.	Parent=CGI_10017329;
	scaffold1900	TRF	Tandem_Repeat	126765	126820	112	+	.	.
scaffold1900	subtractBed	intrn	131411	131468	.	+	.	Parent=CGI_10017329;
	scaffold1900	TRF	Tandem_Repeat	131411	131468	91	+	.	.
scaffold1900	subtractBed	intrn	132798	133553	.	+	.	Parent=CGI_10017329;
	scaffold1900	TRF	Tandem_Repeat	132798	133553	1047	+	.	.
scaffold1900	subtractBed	intrn	192681	193000	.	-	.	Parent=CGI_10017334;
	scaffold1900	TRF	Tandem_Repeat	192681	193000	156	+	.	.
scaffold1900	subtractBed	intrn	194633	194696	.	-	.	Parent=CGI_10017334;
	scaffold1900	TRF	Tandem_Repeat	194633	194696	119	+	.	.
scaffold1900	subtractBed	intrn	210887	212232	.	-	.	Parent=CGI_10017334;
	scaffold1900	TRF	Tandem_Repeat	210887	212232	1569	+	.	.
scaffold1900	subtractBed	intrn	212401	212452	.	-	.	Parent=CGI_10017334;
	scaffold1900	TRF	Tandem_Repeat	212401	212452	50	+	.	.
scaffold1900	subtractBed	intrn	215549	215580	.	-	.	Parent=CGI_10017334;
	scaffold1900	TRF	Tandem_Repeat	215549	215580	64	+	.	.
scaffold1900	subtractBed	intrn	222625	222704	.	+	.	Parent=CGI_10017336;
	scaffold1900	TRF	Tandem_Repeat	222625	222704	133	+	.	.
scaffold1900	subtractBed	intrn	222770	222825	.	+	.	Parent=CGI_10017336;
	scaffold1900	TRF	Tandem_Repeat	222770	222825	51	+	.	.
scaffold1900	subtractBed	intrn	225388	225457	.	+	.	Parent=CGI_10017336;
	scaffold1900	TRF	Tandem_Repeat	225388	225457	122	+	.	.
scaffold1900	subtractBed	intrn	270347	270381	.	-	.	Parent=CGI_10017338;
	scaffold1900	TRF	Tandem_Repeat	270347	270381	70	+	.	.
scaffold1900	subtractBed	intrn	270347	270381	.	+	.	Parent=CGI_10017339;
	scaffold1900	TRF	Tandem_Repeat	270347	270381	70	+	.	.
scaffold1900	subtractBed	intrn	279378	279521	.	-	.	Parent=CGI_10017340;
	scaffold1900	TRF	Tandem_Repeat	279378	279521	129	+	.	.
scaffold1900	subtractBed	intrn	279405	279611	.	-	.	Parent=CGI_10017340;
	scaffold1900	TRF	Tandem_Repeat	279405	279611	87	+	.	.
scaffold1900	subtractBed	intrn	281448	281991	.	-	.	Parent=CGI_10017341;
	scaffold1900	TRF	Tandem_Repeat	281448	281991	625	+	.	.
scaffold1900	subtractBed	intrn	281404	282014	.	-	.	Parent=CGI_10017341;
	scaffold1900	TRF	Tandem_Repeat	281404	282014	476	+	.	.
scaffold1900	subtractBed	intrn	299786	299846	.	+	.	Parent=CGI_10017343;
	scaffold1900	TRF	Tandem_Repeat	299786	299846	122	+	.	.
scaffold1900	subtractBed	intrn	306707	306747	.	+	.	Parent=CGI_10017343;
	scaffold1900	TRF	Tandem_Repeat	306707	306747	82	+	.	.
scaffold1900	subtractBed	intrn	316974	317950	.	+	.	Parent=CGI_10017343;
	scaffold1900	TRF	Tandem_Repeat	316974	317950	835	+	.	.
scaffold1900	subtractBed	intrn	338307	338386	.	-	.	Parent=CGI_10017344;
	scaffold1900	TRF	Tandem_Repeat	338307	338386	160	+	.	.
scaffold1900	subtractBed	intrn	391200	391724	.	-	.	Parent=CGI_10017347;
	scaffold1900	WUBlastX	LINE_L1-Tx1	391200	391724	286	+	.	.
scaffold1900	subtractBed	intrn	391739	393091	.	-	.	Parent=CGI_10017347;
	scaffold1900	WUBlastX	LINE_L1-Tx1	391739	393091	233	+	.	.
scaffold1900	subtractBed	intrn	393093	393203	.	-	.	Parent=CGI_10017347;
	scaffold1900	WUBlastX	LINE_L1	393093	393203	24	+	.	.
scaffold1900	subtractBed	intrn	396983	397024	.	-	.	Parent=CGI_10017347;
	scaffold1900	TRF	Tandem_Repeat	396983	397024	50	+	.	.
scaffold1900	subtractBed	intrn	393126	393341	.	-	.	Parent=CGI_10017347;
	scaffold1900	WUBlastX	LINE_L1-Tx1	393126	393341	48	+	.	.
scaffold1900	subtractBed	intrn	427749	427789	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	427749	427789	82	+	.	.
scaffold1900	subtractBed	intrn	428493	428704	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	428493	428704	325	+	.	.
scaffold1900	subtractBed	intrn	432425	432469	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	432425	432469	69	+	.	.
scaffold1900	subtractBed	intrn	432587	432631	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	432587	432631	65	+	.	.
scaffold1900	subtractBed	intrn	432733	432766	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	432733	432766	50	+	.	.
scaffold1900	subtractBed	intrn	432732	432769	.	+	.	Parent=CGI_10017349;
	scaffold1900	TRF	Tandem_Repeat	432732	432769	62	+	.	.
scaffold1900	subtractBed	intrn	462151	462203	.	+	.	Parent=CGI_10017352;
	scaffold1900	TRF	Tandem_Repeat	462151	462203	106	+	.	.
scaffold1900	subtractBed	intrn	463684	463746	.	+	.	Parent=CGI_10017352;
	scaffold1900	TRF	Tandem_Repeat	463684	463746	126	+	.	.
scaffold1900	subtractBed	intrn	468054	468143	.	+	.	Parent=CGI_10017352;
	scaffold1900	TRF	Tandem_Repeat	468054	468143	171	+	.	.
scaffold1900	subtractBed	intrn	486070	486351	.	-	.	Parent=CGI_10017353;
	scaffold1900	TRF	Tandem_Repeat	486070	486351	265	+	.	.
scaffold1901	subtractBed	intrn	58079	58121	.	-	.	Parent=CGI_10015545;
	scaffold1901	TRF	Tandem_Repeat	58079	58121	54	+	.	.
scaffold1901	subtractBed	intrn	78181	78217	.	-	.	Parent=CGI_10015546;
	scaffold1901	TRF	Tandem_Repeat	78181	78217	74	+	.	.
scaffold1901	subtractBed	intrn	80798	80842	.	-	.	Parent=CGI_10015546;
	scaffold1901	TRF	Tandem_Repeat	80798	80842	90	+	.	.
scaffold1901	subtractBed	intrn	82736	82771	.	-	.	Parent=CGI_10015546;
	scaffold1901	TRF	Tandem_Repeat	82736	82771	63	+	.	.
scaffold1901	subtractBed	intrn	83499	83540	.	-	.	Parent=CGI_10015546;
	scaffold1901	TRF	Tandem_Repeat	83499	83540	75	+	.	.
scaffold1901	subtractBed	intrn	89760	89805	.	-	.	Parent=CGI_10015546;
	scaffold1901	TRF	Tandem_Repeat	89760	89805	92	+	.	.
scaffold1901	subtractBed	intrn	189291	189372	.	+	.	Parent=CGI_10015550;
	scaffold1901	TRF	Tandem_Repeat	189291	189372	155	+	.	.
scaffold1901	subtractBed	intrn	215401	215437	.	-	.	Parent=CGI_10015551;
	scaffold1901	TRF	Tandem_Repeat	215401	215437	74	+	.	.
scaffold1901	subtractBed	intrn	272930	272961	.	+	.	Parent=CGI_10015553;
	scaffold1901	TRF	Tandem_Repeat	272930	272961	64	+	.	.
scaffold1901	subtractBed	intrn	330686	330721	.	+	.	Parent=CGI_10015556;
	scaffold1901	TRF	Tandem_Repeat	330686	330721	72	+	.	.
scaffold1901	subtractBed	intrn	372214	372480	.	-	.	Parent=CGI_10015562;
	scaffold1901	TRF	Tandem_Repeat	372204	372480	337	+	.	.
scaffold1901	subtractBed	intrn	372214	372480	.	-	.	Parent=CGI_10015562;
	scaffold1901	TRF	Tandem_Repeat	372204	372480	385	+	.	.
scaffold1901	subtractBed	intrn	388883	389038	.	-	.	Parent=CGI_10015562;
	scaffold1901	TRF	Tandem_Repeat	388883	389038	276	+	.	.
scaffold1901	subtractBed	intrn	372214	372480	.	+	.	Parent=CGI_10015563;
	scaffold1901	TRF	Tandem_Repeat	372204	372480	337	+	.	.
scaffold1901	subtractBed	intrn	372214	372480	.	+	.	Parent=CGI_10015563;
	scaffold1901	TRF	Tandem_Repeat	372204	372480	385	+	.	.
scaffold1901	subtractBed	intrn	388883	389038	.	+	.	Parent=CGI_10015564;
	scaffold1901	TRF	Tandem_Repeat	388883	389038	276	+	.	.
scaffold1901	subtractBed	intrn	414248	414281	.	+	.	Parent=CGI_10015566;
	scaffold1901	TRF	Tandem_Repeat	414248	414281	59	+	.	.
scaffold1901	subtractBed	intrn	415430	415477	.	+	.	Parent=CGI_10015566;
	scaffold1901	TRF	Tandem_Repeat	415430	415477	73	+	.	.
scaffold191	subtractBed	intrn	64873	65004	.	-	.	Parent=CGI_10022409;
	scaffold191	TRF	Tandem_Repeat	64873	65004	129	+	.	.
scaffold191	subtractBed	intrn	64874	64997	.	-	.	Parent=CGI_10022409;
	scaffold191	TRF	Tandem_Repeat	64874	64997	135	+	.	.
scaffold191	subtractBed	intrn	65407	65479	.	-	.	Parent=CGI_10022409;
	scaffold191	TRF	Tandem_Repeat	65407	65479	103	+	.	.
scaffold191	subtractBed	intrn	65015	65248	.	-	.	Parent=CGI_10022409;
	scaffold191	WUBlastX	DNA_NOF?	65015	65248	71	+	.	.
scaffold191	subtractBed	intrn	72425	72685	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	72425	72685	283	+	.	.
scaffold191	subtractBed	intrn	72471	72724	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	72471	72724	325	+	.	.
scaffold191	subtractBed	intrn	72471	72689	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	72471	72689	287	+	.	.
scaffold191	subtractBed	intrn	73540	73758	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	73540	73758	222	+	.	.
scaffold191	subtractBed	intrn	74534	74779	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	74534	74779	233	+	.	.
scaffold191	subtractBed	intrn	74951	75150	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	74951	75150	235	+	.	.
scaffold191	subtractBed	intrn	75721	75906	.	-	.	Parent=CGI_10022410;
	scaffold191	TRF	Tandem_Repeat	75721	75906	188	+	.	.
scaffold191	subtractBed	intrn	174687	174751	.	-	.	Parent=CGI_10022414;
	scaffold191	TRF	Tandem_Repeat	174687	174751	58	+	.	.
scaffold191	subtractBed	intrn	182326	182415	.	-	.	Parent=CGI_10022414;
	scaffold191	WUBlastX	LINE_CR1-L2	182326	182415	21	+	.	.
scaffold191	subtractBed	intrn	181760	182359	.	-	.	Parent=CGI_10022414;
	scaffold191	WUBlastX	LINE_CR1-L2	181760	182359	243	+	.	.
scaffold191	subtractBed	intrn	206071	206132	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206071	206409	74	-	.	.
scaffold191	subtractBed	intrn	206022	206040	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	205828	206040	69	-	.	.
scaffold191	subtractBed	intrn	206131	206132	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206131	206391	93	-	.	.
scaffold191	subtractBed	intrn	206394	206409	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206071	206409	74	-	.	.
scaffold191	subtractBed	intrn	206517	206783	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206517	206783	40	-	.	.
scaffold191	subtractBed	intrn	206517	206717	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206517	206717	76	-	.	.
scaffold191	subtractBed	intrn	206833	207351	.	-	.	Parent=CGI_10022416;
	scaffold191	WUBlastX	DNA_Kolobok	206833	207351	226	-	.	.
scaffold191	subtractBed	intrn	221977	222013	.	-	.	Parent=CGI_10022417;
	scaffold191	TRF	Tandem_Repeat	221977	222013	56	+	.	.
scaffold191	subtractBed	intrn	487595	487662	.	-	.	Parent=CGI_10022422;
	scaffold191	TRF	Tandem_Repeat	487595	487662	82	+	.	.
scaffold191	subtractBed	intrn	491427	491510	.	-	.	Parent=CGI_10022422;
	scaffold191	TRF	Tandem_Repeat	491427	491510	114	+	.	.
scaffold191	subtractBed	intrn	494382	494411	.	-	.	Parent=CGI_10022422;
	scaffold191	TRF	Tandem_Repeat	494382	494411	60	+	.	.
scaffold191	subtractBed	intrn	552049	552270	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_MuDR	552049	552270	97	-	.	.
scaffold191	subtractBed	intrn	551857	552282	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_MuDR	551857	552282	68	-	.	.
scaffold191	subtractBed	intrn	551619	551624	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_MuDR	551181	551624	89	-	.	.
scaffold191	subtractBed	intrn	555619	555675	.	-	.	Parent=CGI_10022426;
	scaffold191	TRF	Tandem_Repeat	555619	555675	114	+	.	.
scaffold191	subtractBed	intrn	554405	554479	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	554405	554479	20	-	.	.
scaffold191	subtractBed	intrn	555050	555262	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	555050	555262	123	-	.	.
scaffold191	subtractBed	intrn	553967	554314	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	553967	554314	56	-	.	.
scaffold191	subtractBed	intrn	554529	554972	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	554529	554972	232	-	.	.
scaffold191	subtractBed	intrn	554075	554263	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	554075	554263	57	-	.	.
scaffold191	subtractBed	intrn	555804	555926	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	555804	555926	21	-	.	.
scaffold191	subtractBed	intrn	555062	555301	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_Jockey	555062	555301	40	-	.	.
scaffold191	subtractBed	intrn	553023	553178	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_CR1	553023	553178	40	-	.	.
scaffold191	subtractBed	intrn	554505	555029	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_RTE-X	554505	555029	196	-	.	.
scaffold191	subtractBed	intrn	556121	556921	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1-Tx1	556121	556921	444	+	.	.
scaffold191	subtractBed	intrn	553026	553154	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_CR1	553026	553154	62	-	.	.
scaffold191	subtractBed	intrn	562074	562135	.	-	.	Parent=CGI_10022426;
	scaffold191	TRF	Tandem_Repeat	562074	562135	106	+	.	.
scaffold191	subtractBed	intrn	559555	559911	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1-Tx1	559555	559911	52	+	.	.
scaffold191	subtractBed	intrn	557581	558756	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1-Tx1	557581	558756	691	+	.	.
scaffold191	subtractBed	intrn	558734	559573	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1-Tx1	558734	559573	174	+	.	.
scaffold191	subtractBed	intrn	557044	558720	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1	557044	558720	308	+	.	.
scaffold191	subtractBed	intrn	556999	557226	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_L1-Tx1	556999	557226	47	+	.	.
scaffold191	subtractBed	intrn	563976	564006	.	-	.	Parent=CGI_10022426;
	scaffold191	TRF	Tandem_Repeat	563976	564006	62	+	.	.
scaffold191	subtractBed	intrn	577180	577266	.	-	.	Parent=CGI_10022426;
	scaffold191	TRF	Tandem_Repeat	577180	577266	174	+	.	.
scaffold191	subtractBed	intrn	574473	574643	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_P	574473	574643	42	-	.	.
scaffold191	subtractBed	intrn	578145	578312	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	LINE_Penelope	578145	578312	67	-	.	.
scaffold191	subtractBed	intrn	574428	574643	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_P	574428	574643	31	-	.	.
scaffold191	subtractBed	intrn	575165	575329	.	-	.	Parent=CGI_10022426;
	scaffold191	WUBlastX	DNA_IS4EU	575165	575329	118	-	.	.
scaffold191	subtractBed	intrn	668916	669710	.	-	.	Parent=CGI_10022428;
	scaffold191	TRF	Tandem_Repeat	668916	669710	1029	+	.	.
scaffold192	subtractBed	intrn	24567	24782	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	24567	24782	52	-	.	.
scaffold192	subtractBed	intrn	24383	24386	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	23340	24386	348	-	.	.
scaffold192	subtractBed	intrn	24537	24746	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	24537	24746	73	-	.	.
scaffold192	subtractBed	intrn	24964	25169	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	24964	25251	197	-	.	.
scaffold192	subtractBed	intrn	24964	25169	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	24964	25320	156	-	.	.
scaffold192	subtractBed	intrn	25403	25407	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	25403	26527	486	-	.	.
scaffold192	subtractBed	intrn	25272	25320	.	-	.	Parent=CGI_10023697;
	scaffold192	WUBlastX	DNA_Sola	24964	25320	156	-	.	.
scaffold192	subtractBed	intrn	50454	50600	.	+	.	Parent=CGI_10023698;
	scaffold192	TRF	Tandem_Repeat	50454	50600	73	+	.	.
scaffold192	subtractBed	intrn	50521	50664	.	+	.	Parent=CGI_10023698;
	scaffold192	TRF	Tandem_Repeat	50521	50664	96	+	.	.
scaffold192	subtractBed	intrn	102867	103057	.	-	.	Parent=CGI_10023700;
	scaffold192	TRF	Tandem_Repeat	102867	103057	239	+	.	.
scaffold192	subtractBed	intrn	154204	154241	.	+	.	Parent=CGI_10023704;
	scaffold192	TRF	Tandem_Repeat	154204	154241	76	+	.	.
scaffold192	subtractBed	intrn	166707	166750	.	+	.	Parent=CGI_10023704;
	scaffold192	TRF	Tandem_Repeat	166707	166750	70	+	.	.
scaffold192	subtractBed	intrn	172436	172460	.	+	.	Parent=CGI_10023704;
	scaffold192	TRF	Tandem_Repeat	172436	172460	50	+	.	.
scaffold192	subtractBed	intrn	190899	190948	.	-	.	Parent=CGI_10023705;
	scaffold192	TRF	Tandem_Repeat	190899	190948	100	+	.	.
scaffold192	subtractBed	intrn	209436	209494	.	-	.	Parent=CGI_10023706;
	scaffold192	TRF	Tandem_Repeat	209436	209494	118	+	.	.
scaffold192	subtractBed	intrn	325568	325630	.	+	.	Parent=CGI_10023713;
	scaffold192	TRF	Tandem_Repeat	325568	325630	96	+	.	.
scaffold192	subtractBed	intrn	381610	381665	.	-	.	Parent=CGI_10023716;
	scaffold192	TRF	Tandem_Repeat	381610	381665	112	+	.	.
scaffold192	subtractBed	intrn	384577	384620	.	-	.	Parent=CGI_10023716;
	scaffold192	TRF	Tandem_Repeat	384577	384620	88	+	.	.
scaffold192	subtractBed	intrn	425625	425732	.	-	.	Parent=CGI_10023717;
	scaffold192	TRF	Tandem_Repeat	425625	425732	51	+	.	.
scaffold192	subtractBed	intrn	429702	429751	.	-	.	Parent=CGI_10023717;
	scaffold192	TRF	Tandem_Repeat	429702	429751	57	+	.	.
scaffold192	subtractBed	intrn	445838	445891	.	-	.	Parent=CGI_10023717;
	scaffold192	TRF	Tandem_Repeat	445838	445891	108	+	.	.
scaffold192	subtractBed	intrn	447073	447122	.	-	.	Parent=CGI_10023717;
	scaffold192	TRF	Tandem_Repeat	447073	447122	100	+	.	.
scaffold192	subtractBed	intrn	465477	465630	.	-	.	Parent=CGI_10023718;
	scaffold192	TRF	Tandem_Repeat	465477	465630	272	+	.	.
scaffold192	subtractBed	intrn	505855	506101	.	-	.	Parent=CGI_10023719;
	scaffold192	TRF	Tandem_Repeat	505855	506101	395	+	.	.
scaffold192	subtractBed	intrn	507304	508669	.	-	.	Parent=CGI_10023719;
	scaffold192	TRF	Tandem_Repeat	507304	508669	2669	+	.	.
scaffold192	subtractBed	intrn	534990	535037	.	+	.	Parent=CGI_10023721;
	scaffold192	TRF	Tandem_Repeat	534990	535037	96	+	.	.
scaffold192	subtractBed	intrn	535341	535396	.	+	.	Parent=CGI_10023721;
	scaffold192	TRF	Tandem_Repeat	535341	535396	112	+	.	.
scaffold192	subtractBed	intrn	536150	536177	.	+	.	Parent=CGI_10023721;
	scaffold192	TRF	Tandem_Repeat	536150	536177	56	+	.	.
scaffold192	subtractBed	intrn	554366	554419	.	+	.	Parent=CGI_10023721;
	scaffold192	TRF	Tandem_Repeat	554366	554419	99	+	.	.
scaffold192	subtractBed	intrn	553608	553700	.	+	.	Parent=CGI_10023721;
	scaffold192	WUBlastX	LTR_Pao	553608	553700	41	-	.	.
scaffold192	subtractBed	intrn	553442	553606	.	+	.	Parent=CGI_10023721;
	scaffold192	WUBlastX	LTR_Pao	553442	553606	81	-	.	.
scaffold192	subtractBed	intrn	617465	617627	.	-	.	Parent=CGI_10023722;
	scaffold192	TRF	Tandem_Repeat	617465	617627	202	+	.	.
scaffold192	subtractBed	intrn	621122	621228	.	-	.	Parent=CGI_10023722;
	scaffold192	TRF	Tandem_Repeat	621122	621228	87	+	.	.
scaffold192	subtractBed	intrn	621339	621657	.	-	.	Parent=CGI_10023722;
	scaffold192	TRF	Tandem_Repeat	621339	621657	259	+	.	.
scaffold192	subtractBed	intrn	656099	656131	.	-	.	Parent=CGI_10023723;
	scaffold192	TRF	Tandem_Repeat	656099	656131	57	+	.	.
scaffold192	subtractBed	intrn	662987	663043	.	-	.	Parent=CGI_10023723;
	scaffold192	TRF	Tandem_Repeat	662987	663043	114	+	.	.
scaffold192	subtractBed	intrn	671479	671675	.	-	.	Parent=CGI_10023723;
	scaffold192	TRF	Tandem_Repeat	671479	671675	295	+	.	.
scaffold192	subtractBed	intrn	665462	665560	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy-Gmr1	665462	665560	50	+	.	.
scaffold192	subtractBed	intrn	663920	664060	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	663920	664060	33	+	.	.
scaffold192	subtractBed	intrn	664238	664354	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	664238	664354	31	+	.	.
scaffold192	subtractBed	intrn	664087	664215	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	664087	664215	45	+	.	.
scaffold192	subtractBed	intrn	664217	664345	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	664217	664345	29	+	.	.
scaffold192	subtractBed	intrn	664845	665129	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	664845	665129	60	+	.	.
scaffold192	subtractBed	intrn	665028	665150	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	665028	665150	86	+	.	.
scaffold192	subtractBed	intrn	665462	665587	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	665462	665587	50	+	.	.
scaffold192	subtractBed	intrn	665028	665255	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	665028	665255	72	+	.	.
scaffold192	subtractBed	intrn	665028	665183	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	LTR_Gypsy	665028	665183	85	+	.	.
scaffold192	subtractBed	intrn	673526	674335	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	DNA_TcMar-Tc1	673526	674335	482	+	.	.
scaffold192	subtractBed	intrn	673365	673523	.	-	.	Parent=CGI_10023723;
	scaffold192	WUBlastX	DNA_TcMar-Tc1	673365	673523	33	+	.	.
scaffold192	subtractBed	intrn	675916	675965	.	-	.	Parent=CGI_10023723;
	scaffold192	TRF	Tandem_Repeat	675916	675965	68	+	.	.
scaffold192	subtractBed	intrn	675992	676027	.	-	.	Parent=CGI_10023723;
	scaffold192	TRF	Tandem_Repeat	675992	676027	65	+	.	.
scaffold192	subtractBed	intrn	724647	724678	.	+	.	Parent=CGI_10023725;
	scaffold192	TRF	Tandem_Repeat	724647	724678	55	+	.	.
scaffold192	subtractBed	intrn	724795	725537	.	+	.	Parent=CGI_10023725;
	scaffold192	TRF	Tandem_Repeat	724795	725537	1019	+	.	.
scaffold192	subtractBed	intrn	726467	726680	.	+	.	Parent=CGI_10023725;
	scaffold192	TRF	Tandem_Repeat	726467	726680	83	+	.	.
scaffold192	subtractBed	intrn	754143	757044	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754143	757044	1849	+	.	.
scaffold192	subtractBed	intrn	754297	754661	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754297	754661	247	+	.	.
scaffold192	subtractBed	intrn	754146	756954	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754146	756954	588	+	.	.
scaffold192	subtractBed	intrn	754654	754940	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754654	754940	470	+	.	.
scaffold192	subtractBed	intrn	754602	755001	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754602	755001	464	+	.	.
scaffold192	subtractBed	intrn	754154	757044	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754154	757044	1273	+	.	.
scaffold192	subtractBed	intrn	754143	756954	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	754143	756954	679	+	.	.
scaffold192	subtractBed	intrn	755465	756952	.	-	.	Parent=CGI_10023727;
	scaffold192	TRF	Tandem_Repeat	755465	756952	476	+	.	.
scaffold192	subtractBed	intrn	776391	776433	.	-	.	Parent=CGI_10023729;
	scaffold192	TRF	Tandem_Repeat	776391	776433	77	+	.	.
scaffold192	subtractBed	intrn	776530	776579	.	-	.	Parent=CGI_10023729;
	scaffold192	TRF	Tandem_Repeat	776530	776579	91	+	.	.
scaffold193	subtractBed	intrn	21895	21941	.	-	.	Parent=CGI_10015221;
	scaffold193	TRF	Tandem_Repeat	21895	21941	94	+	.	.
scaffold193	subtractBed	intrn	23047	23101	.	-	.	Parent=CGI_10015221;
	scaffold193	TRF	Tandem_Repeat	23047	23101	110	+	.	.
scaffold193	subtractBed	intrn	60433	60470	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	60433	60470	67	+	.	.
scaffold193	subtractBed	intrn	64546	64582	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	64546	64582	74	+	.	.
scaffold193	subtractBed	intrn	65278	65727	.	+	.	Parent=CGI_10015222;
	scaffold193	WUBlastX	LINE_RTE-X	65278	65727	62	-	.	.
scaffold193	subtractBed	intrn	65311	65646	.	+	.	Parent=CGI_10015222;
	scaffold193	WUBlastX	LINE_RTE-X	65311	65646	82	-	.	.
scaffold193	subtractBed	intrn	79864	79902	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	79864	79902	53	+	.	.
scaffold193	subtractBed	intrn	84273	85319	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	84273	85319	972	+	.	.
scaffold193	subtractBed	intrn	85795	85821	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	85795	85821	54	+	.	.
scaffold193	subtractBed	intrn	87229	88133	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	87229	88133	1130	+	.	.
scaffold193	subtractBed	intrn	91778	92097	.	+	.	Parent=CGI_10015222;
	scaffold193	TRF	Tandem_Repeat	91778	92097	209	+	.	.
scaffold193	subtractBed	intrn	115821	116189	.	+	.	Parent=CGI_10015225;
	scaffold193	TRF	Tandem_Repeat	115821	116189	580	+	.	.
scaffold193	subtractBed	intrn	141832	141913	.	-	.	Parent=CGI_10015226;
	scaffold193	TRF	Tandem_Repeat	141832	141913	164	+	.	.
scaffold193	subtractBed	intrn	190648	191396	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	190648	191396	997	+	.	.
scaffold193	subtractBed	intrn	192651	193085	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	192651	193085	387	+	.	.
scaffold193	subtractBed	intrn	194024	194065	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	194024	194065	77	+	.	.
scaffold193	subtractBed	intrn	195290	195375	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	195290	195375	120	+	.	.
scaffold193	subtractBed	intrn	197066	197161	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	197066	197161	151	+	.	.
scaffold193	subtractBed	intrn	197738	198652	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	197738	198652	616	+	.	.
scaffold193	subtractBed	intrn	197738	198640	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	197738	198640	1026	+	.	.
scaffold193	subtractBed	intrn	197738	198597	.	-	.	Parent=CGI_10015228;
	scaffold193	TRF	Tandem_Repeat	197738	198597	1032	+	.	.
scaffold193	subtractBed	intrn	210609	210666	.	-	.	Parent=CGI_10015229;
	scaffold193	TRF	Tandem_Repeat	210609	210666	98	+	.	.
scaffold193	subtractBed	intrn	228032	228142	.	+	.	Parent=CGI_10015231;
	scaffold193	WUBlastX	LINE_L1-Tx1	228032	228142	38	+	.	.
scaffold193	subtractBed	intrn	228148	228513	.	+	.	Parent=CGI_10015231;
	scaffold193	WUBlastX	LINE_L1-Tx1	228148	228513	89	+	.	.
scaffold193	subtractBed	intrn	248779	248913	.	-	.	Parent=CGI_10015232;
	scaffold193	WUBlastX	LTR_Gypsy-Cigr	248779	248913	106	-	.	.
scaffold193	subtractBed	intrn	248508	248777	.	-	.	Parent=CGI_10015232;
	scaffold193	WUBlastX	LTR_Gypsy-Cigr	248508	248777	75	-	.	.
scaffold193	subtractBed	intrn	255941	256208	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	255941	256208	446	+	.	.
scaffold193	subtractBed	intrn	256720	256946	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	256720	256946	267	+	.	.
scaffold193	subtractBed	intrn	256720	257225	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	256720	257225	638	+	.	.
scaffold193	subtractBed	intrn	256720	257225	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	256720	257225	638	+	.	.
scaffold193	subtractBed	intrn	256945	257225	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	256945	257225	445	+	.	.
scaffold193	subtractBed	intrn	264633	264674	.	-	.	Parent=CGI_10015232;
	scaffold193	TRF	Tandem_Repeat	264633	264674	84	+	.	.
scaffold193	subtractBed	intrn	326690	326886	.	+	.	Parent=CGI_10015236;
	scaffold193	TRF	Tandem_Repeat	326690	326886	295	+	.	.
scaffold193	subtractBed	intrn	335699	335769	.	+	.	Parent=CGI_10015238;
	scaffold193	TRF	Tandem_Repeat	335699	335769	142	+	.	.
scaffold193	subtractBed	intrn	348735	348786	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	348735	348786	65	+	.	.
scaffold193	subtractBed	intrn	349145	349185	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	349145	349185	82	+	.	.
scaffold193	subtractBed	intrn	352500	353164	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	352500	353164	1136	+	.	.
scaffold193	subtractBed	intrn	355560	355995	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	355560	355995	452	+	.	.
scaffold193	subtractBed	intrn	355760	355995	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	355760	355995	402	+	.	.
scaffold193	subtractBed	intrn	357116	357385	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	357116	357385	416	+	.	.
scaffold193	subtractBed	intrn	357515	357740	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	357515	357740	394	+	.	.
scaffold193	subtractBed	intrn	366481	366786	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	366481	366786	241	+	.	.
scaffold193	subtractBed	intrn	369156	369332	.	+	.	Parent=CGI_10015239;
	scaffold193	TRF	Tandem_Repeat	369156	369332	313	+	.	.
scaffold193	subtractBed	intrn	370958	371169	.	-	.	Parent=CGI_10015240;
	scaffold193	TRF	Tandem_Repeat	370958	371169	246	+	.	.
scaffold193	subtractBed	intrn	387802	387861	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	387802	387861	66	+	.	.
scaffold193	subtractBed	intrn	387807	387869	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	387807	387869	108	+	.	.
scaffold193	subtractBed	intrn	387802	387872	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	387802	387872	70	+	.	.
scaffold193	subtractBed	intrn	387811	387872	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	387811	387872	70	+	.	.
scaffold193	subtractBed	intrn	387896	388689	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	387896	388689	1161	+	.	.
scaffold193	subtractBed	intrn	388771	389000	.	+	.	Parent=CGI_10015241;
	scaffold193	TRF	Tandem_Repeat	388771	389000	426	+	.	.
scaffold193	subtractBed	intrn	398842	399144	.	+	.	Parent=CGI_10015243;
	scaffold193	TRF	Tandem_Repeat	398842	399144	366	+	.	.
scaffold193	subtractBed	intrn	402099	402352	.	+	.	Parent=CGI_10015243;
	scaffold193	TRF	Tandem_Repeat	402099	402352	447	+	.	.
scaffold193	subtractBed	intrn	418190	418214	.	-	.	Parent=CGI_10015248;
	scaffold193	TRF	Tandem_Repeat	418190	418214	50	+	.	.
scaffold193	subtractBed	intrn	418213	418243	.	-	.	Parent=CGI_10015248;
	scaffold193	TRF	Tandem_Repeat	418213	418243	62	+	.	.
scaffold193	subtractBed	intrn	418388	418893	.	-	.	Parent=CGI_10015248;
	scaffold193	TRF	Tandem_Repeat	418388	418893	967	+	.	.
scaffold193	subtractBed	intrn	418005	418157	.	-	.	Parent=CGI_10015248;
	scaffold193	WUBlastX	LINE_L2	418005	418157	69	-	.	.
scaffold194	subtractBed	intrn	89628	89708	.	+	.	Parent=CGI_10011059;
	scaffold194	TRF	Tandem_Repeat	89628	89708	162	+	.	.
scaffold194	subtractBed	intrn	92658	93170	.	+	.	Parent=CGI_10011059;
	scaffold194	WUBlastX	LINE_Penelope	92658	93170	45	+	.	.
scaffold194	subtractBed	intrn	92766	93152	.	+	.	Parent=CGI_10011059;
	scaffold194	WUBlastX	LINE_Penelope	92766	93152	66	+	.	.
scaffold194	subtractBed	intrn	94729	95004	.	+	.	Parent=CGI_10011059;
	scaffold194	WUBlastX	LTR_Gypsy	94729	95004	87	+	.	.
scaffold194	subtractBed	intrn	95896	96330	.	+	.	Parent=CGI_10011059;
	scaffold194	WUBlastX	LTR_Gypsy	95896	96330	244	+	.	.
scaffold194	subtractBed	intrn	96338	98047	.	+	.	Parent=CGI_10011059;
	scaffold194	WUBlastX	LTR_Gypsy	96338	98047	1420	+	.	.
scaffold194	subtractBed	intrn	113308	113333	.	-	.	Parent=CGI_10011060;
	scaffold194	TRF	Tandem_Repeat	113308	113333	52	+	.	.
scaffold194	subtractBed	intrn	117100	117346	.	-	.	Parent=CGI_10011060;
	scaffold194	TRF	Tandem_Repeat	117100	117346	467	+	.	.
scaffold194	subtractBed	intrn	121066	121401	.	-	.	Parent=CGI_10011060;
	scaffold194	TRF	Tandem_Repeat	121066	121401	246	+	.	.
scaffold194	subtractBed	intrn	121019	121385	.	-	.	Parent=CGI_10011060;
	scaffold194	TRF	Tandem_Repeat	121019	121385	521	+	.	.
scaffold194	subtractBed	intrn	120970	121358	.	-	.	Parent=CGI_10011060;
	scaffold194	TRF	Tandem_Repeat	120970	121358	147	+	.	.
scaffold194	subtractBed	intrn	152197	153439	.	-	.	Parent=CGI_10011064;
	scaffold194	TRF	Tandem_Repeat	152197	153439	1382	+	.	.
scaffold194	subtractBed	intrn	156338	156518	.	-	.	Parent=CGI_10011064;
	scaffold194	TRF	Tandem_Repeat	156338	156527	233	+	.	.
scaffold194	subtractBed	intrn	158129	158287	.	-	.	Parent=CGI_10011064;
	scaffold194	TRF	Tandem_Repeat	158129	158297	223	+	.	.
scaffold194	subtractBed	intrn	164122	164563	.	-	.	Parent=CGI_10011064;
	scaffold194	TRF	Tandem_Repeat	164122	164563	537	+	.	.
scaffold194	subtractBed	intrn	164000	164581	.	-	.	Parent=CGI_10011064;
	scaffold194	TRF	Tandem_Repeat	164000	164593	663	+	.	.
scaffold194	subtractBed	intrn	206325	206373	.	-	.	Parent=CGI_10011067;
	scaffold194	TRF	Tandem_Repeat	206325	206373	98	+	.	.
scaffold194	subtractBed	intrn	205513	205533	.	-	.	Parent=CGI_10011067;
	scaffold194	WUBlastX	DNA_Sola	205153	205533	35	-	.	.
scaffold194	subtractBed	intrn	253756	253805	.	+	.	Parent=CGI_10011068;
	scaffold194	TRF	Tandem_Repeat	253756	253805	100	+	.	.
scaffold194	subtractBed	intrn	255766	255813	.	+	.	Parent=CGI_10011068;
	scaffold194	TRF	Tandem_Repeat	255766	255813	78	+	.	.
scaffold194	subtractBed	intrn	253985	254257	.	+	.	Parent=CGI_10011068;
	scaffold194	WUBlastX	DNA_Harbinger	253985	254257	118	-	.	.
scaffold194	subtractBed	intrn	254269	254337	.	+	.	Parent=CGI_10011068;
	scaffold194	WUBlastX	DNA_Harbinger	254269	254337	65	-	.	.
scaffold194	subtractBed	intrn	260953	261225	.	+	.	Parent=CGI_10011068;
	scaffold194	WUBlastX	DNA_Crypton	260953	261225	48	-	.	.
scaffold194	subtractBed	intrn	270484	270531	.	+	.	Parent=CGI_10011068;
	scaffold194	TRF	Tandem_Repeat	270484	270531	96	+	.	.
scaffold194	subtractBed	intrn	273120	273767	.	+	.	Parent=CGI_10011068;
	scaffold194	WUBlastX	RC_Helitron	273120	273767	155	-	.	.
scaffold194	subtractBed	intrn	273120	273767	.	-	.	Parent=CGI_10011069;
	scaffold194	WUBlastX	RC_Helitron	273120	273767	155	-	.	.
scaffold196	subtractBed	intrn	10417	11272	.	+	.	Parent=CGI_10001478;
	scaffold196	TRF	Tandem_Repeat	10417	11272	993	+	.	.
scaffold196	subtractBed	intrn	12270	12369	.	+	.	Parent=CGI_10001478;
	scaffold196	TRF	Tandem_Repeat	12270	12369	57	+	.	.
scaffold198	subtractBed	intrn	15227	15290	.	+	.	Parent=CGI_10027787;
	scaffold198	TRF	Tandem_Repeat	15227	15290	128	+	.	.
scaffold198	subtractBed	intrn	18116	18144	.	+	.	Parent=CGI_10027787;
	scaffold198	TRF	Tandem_Repeat	18116	18144	58	+	.	.
scaffold198	subtractBed	intrn	15573	16463	.	+	.	Parent=CGI_10027787;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	15573	16463	188	-	.	.
scaffold198	subtractBed	intrn	50786	50844	.	-	.	Parent=CGI_10027788;
	scaffold198	TRF	Tandem_Repeat	50786	50844	109	+	.	.
scaffold198	subtractBed	intrn	101556	101639	.	-	.	Parent=CGI_10027793;
	scaffold198	TRF	Tandem_Repeat	101556	101639	50	+	.	.
scaffold198	subtractBed	intrn	101556	101639	.	-	.	Parent=CGI_10027793;
	scaffold198	TRF	Tandem_Repeat	101556	101639	50	+	.	.
scaffold198	subtractBed	intrn	113463	113553	.	-	.	Parent=CGI_10027793;
	scaffold198	TRF	Tandem_Repeat	113463	113553	146	+	.	.
scaffold198	subtractBed	intrn	113463	113553	.	-	.	Parent=CGI_10027793;
	scaffold198	TRF	Tandem_Repeat	113463	113553	157	+	.	.
scaffold198	subtractBed	intrn	113463	113553	.	+	.	Parent=CGI_10027794;
	scaffold198	TRF	Tandem_Repeat	113463	113553	146	+	.	.
scaffold198	subtractBed	intrn	113463	113553	.	+	.	Parent=CGI_10027794;
	scaffold198	TRF	Tandem_Repeat	113463	113553	157	+	.	.
scaffold198	subtractBed	intrn	127420	127447	.	+	.	Parent=CGI_10027795;
	scaffold198	TRF	Tandem_Repeat	127420	127447	56	+	.	.
scaffold198	subtractBed	intrn	127535	127561	.	+	.	Parent=CGI_10027795;
	scaffold198	TRF	Tandem_Repeat	127535	127561	54	+	.	.
scaffold198	subtractBed	intrn	129619	129813	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	129619	129813	76	-	.	.
scaffold198	subtractBed	intrn	129368	129568	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	129368	129568	96	-	.	.
scaffold198	subtractBed	intrn	129709	129813	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	129709	129813	83	-	.	.
scaffold198	subtractBed	intrn	130062	130259	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	130062	130259	72	-	.	.
scaffold198	subtractBed	intrn	130032	130214	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	130032	130214	41	-	.	.
scaffold198	subtractBed	intrn	129305	129514	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	129305	129514	41	-	.	.
scaffold198	subtractBed	intrn	129712	129846	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	129712	129846	33	-	.	.
scaffold198	subtractBed	intrn	130077	130199	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_Harbinger	130077	130199	74	-	.	.
scaffold198	subtractBed	intrn	132509	132937	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132509	132937	53	-	.	.
scaffold198	subtractBed	intrn	131924	132136	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	131924	132136	143	-	.	.
scaffold198	subtractBed	intrn	132106	132432	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132106	132432	195	-	.	.
scaffold198	subtractBed	intrn	132473	132856	.	+	.	Parent=CGI_10027795;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132473	132856	172	-	.	.
scaffold198	subtractBed	intrn	147501	147601	.	+	.	Parent=CGI_10027795;
	scaffold198	TRF	Tandem_Repeat	147501	147601	78	+	.	.
scaffold198	subtractBed	intrn	129619	129813	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	129619	129813	76	-	.	.
scaffold198	subtractBed	intrn	129368	129568	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	129368	129568	96	-	.	.
scaffold198	subtractBed	intrn	129709	129813	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	129709	129813	83	-	.	.
scaffold198	subtractBed	intrn	130062	130259	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	130062	130259	72	-	.	.
scaffold198	subtractBed	intrn	130032	130214	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	130032	130214	41	-	.	.
scaffold198	subtractBed	intrn	129305	129514	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	129305	129514	41	-	.	.
scaffold198	subtractBed	intrn	129712	129846	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	129712	129846	33	-	.	.
scaffold198	subtractBed	intrn	130077	130199	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_Harbinger	130077	130199	74	-	.	.
scaffold198	subtractBed	intrn	132509	132937	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132509	132937	53	-	.	.
scaffold198	subtractBed	intrn	131924	132136	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	131924	132136	143	-	.	.
scaffold198	subtractBed	intrn	132106	132432	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132106	132432	195	-	.	.
scaffold198	subtractBed	intrn	132473	132856	.	-	.	Parent=CGI_10027796;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	132473	132856	172	-	.	.
scaffold198	subtractBed	intrn	147501	147601	.	-	.	Parent=CGI_10027796;
	scaffold198	TRF	Tandem_Repeat	147501	147601	78	+	.	.
scaffold198	subtractBed	intrn	166221	167845	.	+	.	Parent=CGI_10027797;
	scaffold198	TRF	Tandem_Repeat	166221	167845	1943	+	.	.
scaffold198	subtractBed	intrn	166223	167845	.	+	.	Parent=CGI_10027797;
	scaffold198	TRF	Tandem_Repeat	166223	167845	2325	+	.	.
scaffold198	subtractBed	intrn	169117	169235	.	+	.	Parent=CGI_10027797;
	scaffold198	TRF	Tandem_Repeat	169117	169235	89	+	.	.
scaffold198	subtractBed	intrn	172332	172435	.	+	.	Parent=CGI_10027797;
	scaffold198	TRF	Tandem_Repeat	172332	172435	70	+	.	.
scaffold198	subtractBed	intrn	180236	180261	.	+	.	Parent=CGI_10027798;
	scaffold198	TRF	Tandem_Repeat	180236	180261	52	+	.	.
scaffold198	subtractBed	intrn	180263	180357	.	+	.	Parent=CGI_10027798;
	scaffold198	TRF	Tandem_Repeat	180263	180357	68	+	.	.
scaffold198	subtractBed	intrn	248384	248420	.	+	.	Parent=CGI_10027799;
	scaffold198	TRF	Tandem_Repeat	248384	248420	65	+	.	.
scaffold198	subtractBed	intrn	250628	250662	.	+	.	Parent=CGI_10027799;
	scaffold198	TRF	Tandem_Repeat	250628	250662	70	+	.	.
scaffold198	subtractBed	intrn	322784	322830	.	-	.	Parent=CGI_10027804;
	scaffold198	TRF	Tandem_Repeat	322784	322830	60	+	.	.
scaffold198	subtractBed	intrn	322784	322828	.	-	.	Parent=CGI_10027804;
	scaffold198	TRF	Tandem_Repeat	322784	322828	60	+	.	.
scaffold198	subtractBed	intrn	329881	329998	.	-	.	Parent=CGI_10027805;
	scaffold198	TRF	Tandem_Repeat	329881	329998	148	+	.	.
scaffold198	subtractBed	intrn	333286	335268	.	-	.	Parent=CGI_10027805;
	scaffold198	TRF	Tandem_Repeat	333286	335281	2519	+	.	.
scaffold198	subtractBed	intrn	420311	420343	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	420311	420343	66	+	.	.
scaffold198	subtractBed	intrn	422431	422471	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	422431	422471	82	+	.	.
scaffold198	subtractBed	intrn	422548	422617	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	422548	422617	140	+	.	.
scaffold198	subtractBed	intrn	422974	423033	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	422974	423033	66	+	.	.
scaffold198	subtractBed	intrn	423249	423334	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	423249	423334	147	+	.	.
scaffold198	subtractBed	intrn	424154	424254	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	424154	424254	94	+	.	.
scaffold198	subtractBed	intrn	424294	424403	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	424294	424403	170	+	.	.
scaffold198	subtractBed	intrn	426061	426312	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	426061	426312	377	+	.	.
scaffold198	subtractBed	intrn	426700	427710	.	+	.	Parent=CGI_10027808;
	scaffold198	WUBlastX	DNA_TcMar-Tc1	426700	427710	586	+	.	.
scaffold198	subtractBed	intrn	426676	426807	.	+	.	Parent=CGI_10027808;
	scaffold198	WUBlastX	DNA_TcMar-Marin	426676	426807	20	+	.	.
scaffold198	subtractBed	intrn	439448	439481	.	+	.	Parent=CGI_10027808;
	scaffold198	TRF	Tandem_Repeat	439448	439481	68	+	.	.
scaffold198	subtractBed	intrn	469267	470723	.	-	.	Parent=CGI_10027810;
	scaffold198	TRF	Tandem_Repeat	469267	470723	2066	+	.	.
scaffold198	subtractBed	intrn	470747	470785	.	-	.	Parent=CGI_10027810;
	scaffold198	TRF	Tandem_Repeat	470747	470785	51	+	.	.
scaffold198	subtractBed	intrn	478382	478432	.	+	.	Parent=CGI_10027811;
	scaffold198	TRF	Tandem_Repeat	478382	478432	102	+	.	.
scaffold198	subtractBed	intrn	479035	479060	.	+	.	Parent=CGI_10027811;
	scaffold198	TRF	Tandem_Repeat	479035	479060	52	+	.	.
scaffold198	subtractBed	intrn	483594	483634	.	+	.	Parent=CGI_10027811;
	scaffold198	TRF	Tandem_Repeat	483594	483634	82	+	.	.
scaffold198	subtractBed	intrn	535404	535429	.	+	.	Parent=CGI_10027815;
	scaffold198	TRF	Tandem_Repeat	535404	535429	52	+	.	.
scaffold198	subtractBed	intrn	537068	537109	.	+	.	Parent=CGI_10027815;
	scaffold198	TRF	Tandem_Repeat	537068	537109	66	+	.	.
scaffold198	subtractBed	intrn	548816	549589	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	548816	549589	169	+	.	.
scaffold198	subtractBed	intrn	548534	549313	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	548534	549313	43	+	.	.
scaffold198	subtractBed	intrn	549026	550378	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	549026	550378	219	+	.	.
scaffold198	subtractBed	intrn	553334	553402	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	553334	553402	33	+	.	.
scaffold198	subtractBed	intrn	549713	553234	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	549713	553234	1845	+	.	.
scaffold198	subtractBed	intrn	550415	553201	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy-Cigr	550415	553201	2093	+	.	.
scaffold198	subtractBed	intrn	552572	553378	.	+	.	Parent=CGI_10027815;
	scaffold198	WUBlastX	LTR_Gypsy	552572	553378	136	+	.	.
scaffold198	subtractBed	intrn	689778	689810	.	+	.	Parent=CGI_10027818;
	scaffold198	TRF	Tandem_Repeat	689778	689810	66	+	.	.
scaffold198	subtractBed	intrn	774437	774850	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LINE_L2	774437	774850	162	+	.	.
scaffold198	subtractBed	intrn	788757	790227	.	+	.	Parent=CGI_10027821;
	scaffold198	TRF	Tandem_Repeat	788757	790227	2353	+	.	.
scaffold198	subtractBed	intrn	798222	799097	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LTR_Gypsy	798222	799097	59	+	.	.
scaffold198	subtractBed	intrn	800115	802553	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LTR_Gypsy	800115	802553	1238	+	.	.
scaffold198	subtractBed	intrn	797317	798003	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LTR_Gypsy	797317	798003	203	+	.	.
scaffold198	subtractBed	intrn	798354	802154	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LTR_Gypsy	798354	802154	2181	+	.	.
scaffold198	subtractBed	intrn	797158	798249	.	+	.	Parent=CGI_10027821;
	scaffold198	WUBlastX	LTR_Gypsy	797158	798249	59	+	.	.
scaffold198	subtractBed	intrn	815929	816171	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	815929	816171	468	+	.	.
scaffold198	subtractBed	intrn	817308	817659	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	817308	817659	501	+	.	.
scaffold198	subtractBed	intrn	817827	818102	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	817827	818102	319	+	.	.
scaffold198	subtractBed	intrn	821987	822032	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	821987	822032	74	+	.	.
scaffold198	subtractBed	intrn	821990	822040	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	821990	822040	50	+	.	.
scaffold198	subtractBed	intrn	818703	820014	.	-	.	Parent=CGI_10027824;
	scaffold198	TRF	Tandem_Repeat	818703	820014	1308	+	.	.
scaffold198	subtractBed	intrn	832555	832660	.	+	.	Parent=CGI_10027825;
	scaffold198	TRF	Tandem_Repeat	832555	832660	117	+	.	.
scaffold198	subtractBed	intrn	835218	835326	.	+	.	Parent=CGI_10027825;
	scaffold198	TRF	Tandem_Repeat	835218	835326	130	+	.	.
scaffold198	subtractBed	intrn	835218	835339	.	+	.	Parent=CGI_10027825;
	scaffold198	TRF	Tandem_Repeat	835218	835339	120	+	.	.
scaffold198	subtractBed	intrn	835680	836048	.	+	.	Parent=CGI_10027825;
	scaffold198	TRF	Tandem_Repeat	835658	836048	383	+	.	.
scaffold198	subtractBed	intrn	836240	836360	.	+	.	Parent=CGI_10027825;
	scaffold198	TRF	Tandem_Repeat	836240	836360	129	+	.	.
scaffold198	subtractBed	intrn	858783	858968	.	-	.	Parent=CGI_10027828;
	scaffold198	TRF	Tandem_Repeat	858783	858968	108	+	.	.
scaffold198	subtractBed	intrn	868223	868470	.	-	.	Parent=CGI_10027830;
	scaffold198	TRF	Tandem_Repeat	868223	868470	464	+	.	.
scaffold198	subtractBed	intrn	870608	870759	.	-	.	Parent=CGI_10027830;
	scaffold198	TRF	Tandem_Repeat	870608	870767	293	+	.	.
scaffold198	subtractBed	intrn	890058	890209	.	+	.	Parent=CGI_10027833;
	scaffold198	TRF	Tandem_Repeat	890058	890209	178	+	.	.
scaffold198	subtractBed	intrn	895371	895436	.	+	.	Parent=CGI_10027833;
	scaffold198	TRF	Tandem_Repeat	895371	895436	107	+	.	.
scaffold198	subtractBed	intrn	913156	913716	.	+	.	Parent=CGI_10027834;
	scaffold198	TRF	Tandem_Repeat	913156	913716	761	+	.	.
scaffold198	subtractBed	intrn	914447	915239	.	+	.	Parent=CGI_10027834;
	scaffold198	TRF	Tandem_Repeat	914447	915239	1002	+	.	.
scaffold198	subtractBed	intrn	922844	922888	.	-	.	Parent=CGI_10027835;
	scaffold198	TRF	Tandem_Repeat	922844	922888	56	+	.	.
scaffold198	subtractBed	intrn	936413	936854	.	-	.	Parent=CGI_10027837;
	scaffold198	TRF	Tandem_Repeat	936413	936854	568	+	.	.
scaffold198	subtractBed	intrn	940778	940820	.	-	.	Parent=CGI_10027837;
	scaffold198	TRF	Tandem_Repeat	940778	940820	86	+	.	.
scaffold198	subtractBed	intrn	1047151	1047225	.	+	.	Parent=CGI_10027842;
	scaffold198	TRF	Tandem_Repeat	1047151	1047225	114	+	.	.
scaffold198	subtractBed	intrn	1047152	1047218	.	+	.	Parent=CGI_10027842;
	scaffold198	TRF	Tandem_Repeat	1047152	1047218	80	+	.	.
scaffold198	subtractBed	intrn	1047230	1047886	.	+	.	Parent=CGI_10027842;
	scaffold198	TRF	Tandem_Repeat	1047230	1047886	889	+	.	.
scaffold198	subtractBed	intrn	1066260	1066519	.	+	.	Parent=CGI_10027844;
	scaffold198	TRF	Tandem_Repeat	1066252	1066519	437	+	.	.
scaffold198	subtractBed	intrn	1067574	1067798	.	+	.	Parent=CGI_10027844;
	scaffold198	TRF	Tandem_Repeat	1067574	1067798	181	+	.	.
scaffold198	subtractBed	intrn	1075421	1075509	.	+	.	Parent=CGI_10027844;
	scaffold198	TRF	Tandem_Repeat	1075421	1075509	108	+	.	.
scaffold198	subtractBed	intrn	1081465	1081744	.	+	.	Parent=CGI_10027844;
	scaffold198	TRF	Tandem_Repeat	1081449	1081744	286	+	.	.
scaffold198	subtractBed	intrn	1081544	1081938	.	+	.	Parent=CGI_10027844;
	scaffold198	TRF	Tandem_Repeat	1081544	1081938	268	+	.	.
scaffold198	subtractBed	intrn	1087396	1088315	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1087396	1088324	1615	+	.	.
scaffold198	subtractBed	intrn	1089120	1089840	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1089120	1089858	815	+	.	.
scaffold198	subtractBed	intrn	1089120	1089840	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1089120	1089862	731	+	.	.
scaffold198	subtractBed	intrn	1089155	1089840	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1089155	1089878	590	+	.	.
scaffold198	subtractBed	intrn	1091902	1092057	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1091902	1092057	249	+	.	.
scaffold198	subtractBed	intrn	1092473	1093030	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1092473	1093030	753	+	.	.
scaffold198	subtractBed	intrn	1098058	1098327	.	-	.	Parent=CGI_10027846;
	scaffold198	TRF	Tandem_Repeat	1098058	1098327	163	+	.	.
scaffold198	subtractBed	intrn	1106723	1107513	.	-	.	Parent=CGI_10027847;
	scaffold198	TRF	Tandem_Repeat	1106723	1107513	1564	+	.	.
scaffold198	subtractBed	intrn	1127025	1127599	.	-	.	Parent=CGI_10027847;
	scaffold198	TRF	Tandem_Repeat	1127025	1127599	745	+	.	.
scaffold198	subtractBed	intrn	1140292	1140415	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1140292	1140415	83	+	.	.
scaffold198	subtractBed	intrn	1140294	1140494	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1140294	1140494	164	+	.	.
scaffold198	subtractBed	intrn	1141424	1142221	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1141424	1142221	941	+	.	.
scaffold198	subtractBed	intrn	1147807	1147992	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1147807	1147992	65	+	.	.
scaffold198	subtractBed	intrn	1148966	1149882	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1148966	1149882	1244	+	.	.
scaffold198	subtractBed	intrn	1148966	1149986	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1148966	1149986	1119	+	.	.
scaffold198	subtractBed	intrn	1152881	1152907	.	-	.	Parent=CGI_10027849;
	scaffold198	TRF	Tandem_Repeat	1152881	1152907	54	+	.	.
scaffold198	subtractBed	intrn	1168104	1168148	.	+	.	Parent=CGI_10027850;
	scaffold198	TRF	Tandem_Repeat	1168104	1168148	90	+	.	.
scaffold198	subtractBed	intrn	1168473	1168524	.	+	.	Parent=CGI_10027850;
	scaffold198	TRF	Tandem_Repeat	1168473	1168524	104	+	.	.
scaffold198	subtractBed	intrn	1171358	1171429	.	+	.	Parent=CGI_10027850;
	scaffold198	WUBlastX	LINE_CR1-L2	1171358	1171429	37	-	.	.
scaffold198	subtractBed	intrn	1171222	1171365	.	+	.	Parent=CGI_10027850;
	scaffold198	WUBlastX	LINE_CR1-L2	1171222	1171365	61	-	.	.
scaffold198	subtractBed	intrn	1171222	1171335	.	+	.	Parent=CGI_10027850;
	scaffold198	WUBlastX	LINE_CR1-L2	1171222	1171335	66	-	.	.
scaffold198	subtractBed	intrn	1171358	1171429	.	-	.	Parent=CGI_10027851;
	scaffold198	WUBlastX	LINE_CR1-L2	1171358	1171429	37	-	.	.
scaffold198	subtractBed	intrn	1171222	1171365	.	-	.	Parent=CGI_10027851;
	scaffold198	WUBlastX	LINE_CR1-L2	1171222	1171365	61	-	.	.
scaffold198	subtractBed	intrn	1171222	1171335	.	-	.	Parent=CGI_10027851;
	scaffold198	WUBlastX	LINE_CR1-L2	1171222	1171335	66	-	.	.
scaffold198	subtractBed	intrn	1173822	1174639	.	-	.	Parent=CGI_10027851;
	scaffold198	TRF	Tandem_Repeat	1173822	1174639	1317	+	.	.
scaffold198	subtractBed	intrn	1230892	1230948	.	-	.	Parent=CGI_10027853;
	scaffold198	TRF	Tandem_Repeat	1230892	1230948	98	+	.	.
scaffold198	subtractBed	intrn	1231159	1231338	.	-	.	Parent=CGI_10027853;
	scaffold198	TRF	Tandem_Repeat	1231159	1231338	360	+	.	.
scaffold198	subtractBed	intrn	1230892	1230948	.	+	.	Parent=CGI_10027854;
	scaffold198	TRF	Tandem_Repeat	1230892	1230948	98	+	.	.
scaffold198	subtractBed	intrn	1231159	1231338	.	+	.	Parent=CGI_10027854;
	scaffold198	TRF	Tandem_Repeat	1231159	1231338	360	+	.	.
scaffold198	subtractBed	intrn	1243391	1243556	.	+	.	Parent=CGI_10027855;
	scaffold198	TRF	Tandem_Repeat	1243391	1243556	113	+	.	.
scaffold198	subtractBed	intrn	1244059	1244254	.	+	.	Parent=CGI_10027855;
	scaffold198	TRF	Tandem_Repeat	1244059	1244254	130	+	.	.
scaffold198	subtractBed	intrn	1244061	1244294	.	+	.	Parent=CGI_10027855;
	scaffold198	TRF	Tandem_Repeat	1244061	1244294	145	+	.	.
scaffold198	subtractBed	intrn	1244200	1244294	.	+	.	Parent=CGI_10027855;
	scaffold198	TRF	Tandem_Repeat	1244200	1244294	86	+	.	.
scaffold198	subtractBed	intrn	1244057	1244339	.	+	.	Parent=CGI_10027855;
	scaffold198	TRF	Tandem_Repeat	1244057	1244339	106	+	.	.
scaffold198	subtractBed	intrn	1248411	1250128	.	+	.	Parent=CGI_10027856;
	scaffold198	TRF	Tandem_Repeat	1248411	1250128	2368	+	.	.
scaffold198	subtractBed	intrn	1248411	1250128	.	+	.	Parent=CGI_10027856;
	scaffold198	TRF	Tandem_Repeat	1248411	1250128	2482	+	.	.
scaffold198	subtractBed	intrn	1255889	1256266	.	-	.	Parent=CGI_10027857;
	scaffold198	TRF	Tandem_Repeat	1255889	1256266	427	+	.	.
scaffold198	subtractBed	intrn	1260544	1260709	.	-	.	Parent=CGI_10027857;
	scaffold198	TRF	Tandem_Repeat	1260544	1260709	332	+	.	.
scaffold198	subtractBed	intrn	1276813	1276852	.	-	.	Parent=CGI_10027859;
	scaffold198	TRF	Tandem_Repeat	1276813	1276852	80	+	.	.
scaffold198	subtractBed	intrn	1303191	1303481	.	+	.	Parent=CGI_10027862;
	scaffold198	TRF	Tandem_Repeat	1303191	1303481	127	+	.	.
scaffold198	subtractBed	intrn	1303582	1303671	.	+	.	Parent=CGI_10027862;
	scaffold198	TRF	Tandem_Repeat	1303582	1303671	110	+	.	.
scaffold198	subtractBed	intrn	1312534	1312724	.	-	.	Parent=CGI_10027863;
	scaffold198	TRF	Tandem_Repeat	1312534	1312724	283	+	.	.
scaffold198	subtractBed	intrn	1315775	1316060	.	-	.	Parent=CGI_10027863;
	scaffold198	TRF	Tandem_Repeat	1315775	1316060	493	+	.	.
scaffold198	subtractBed	intrn	1317763	1317812	.	-	.	Parent=CGI_10027863;
	scaffold198	TRF	Tandem_Repeat	1317763	1317812	64	+	.	.
scaffold198	subtractBed	intrn	1317770	1317825	.	-	.	Parent=CGI_10027863;
	scaffold198	TRF	Tandem_Repeat	1317770	1317825	85	+	.	.
scaffold198	subtractBed	intrn	1317774	1317825	.	-	.	Parent=CGI_10027863;
	scaffold198	TRF	Tandem_Repeat	1317774	1317825	59	+	.	.
scaffold198	subtractBed	intrn	1330577	1330741	.	-	.	Parent=CGI_10027863;
	scaffold198	WUBlastX	DNA_NOF	1330577	1330741	119	-	.	.
scaffold198	subtractBed	intrn	1329451	1329714	.	-	.	Parent=CGI_10027863;
	scaffold198	WUBlastX	DNA_MuDR	1329451	1329714	41	-	.	.
scaffold198	subtractBed	intrn	1329469	1329555	.	-	.	Parent=CGI_10027863;
	scaffold198	WUBlastX	DNA_NOF	1329469	1329555	48	-	.	.
scaffold198	subtractBed	intrn	1330402	1330641	.	-	.	Parent=CGI_10027863;
	scaffold198	WUBlastX	DNA_NOF	1330402	1330641	109	-	.	.
scaffold198	subtractBed	intrn	1409629	1409680	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1409629	1409680	104	+	.	.
scaffold198	subtractBed	intrn	1411542	1411753	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1411542	1411753	204	+	.	.
scaffold198	subtractBed	intrn	1422023	1422392	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1422023	1422392	435	+	.	.
scaffold198	subtractBed	intrn	1422114	1422224	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1422114	1422224	54	+	.	.
scaffold198	subtractBed	intrn	1422309	1422389	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1422309	1422389	51	+	.	.
scaffold198	subtractBed	intrn	1423606	1424575	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1423606	1424575	531	+	.	.
scaffold198	subtractBed	intrn	1423770	1424563	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1423770	1424563	832	+	.	.
scaffold198	subtractBed	intrn	1423902	1424563	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1423902	1424563	787	+	.	.
scaffold198	subtractBed	intrn	1423978	1424563	.	+	.	Parent=CGI_10027867;
	scaffold198	TRF	Tandem_Repeat	1423978	1424563	854	+	.	.
scaffold198	subtractBed	intrn	1431578	1431628	.	+	.	Parent=CGI_10027868;
	scaffold198	TRF	Tandem_Repeat	1431578	1431628	102	+	.	.
scaffold198	subtractBed	intrn	1434414	1434446	.	+	.	Parent=CGI_10027868;
	scaffold198	TRF	Tandem_Repeat	1434414	1434446	66	+	.	.
scaffold198	subtractBed	intrn	1436243	1436514	.	+	.	Parent=CGI_10027868;
	scaffold198	TRF	Tandem_Repeat	1436243	1436514	287	+	.	.
scaffold198	subtractBed	intrn	1444049	1448200	.	+	.	Parent=CGI_10027868;
	scaffold198	TRF	Tandem_Repeat	1444049	1448200	5340	+	.	.
scaffold198	subtractBed	intrn	1446363	1447615	.	+	.	Parent=CGI_10027868;
	scaffold198	TRF	Tandem_Repeat	1446363	1447615	164	+	.	.
scaffold20	subtractBed	intrn	3972	4976	.	-	.	Parent=CGI_10023555;
	scaffold20	WUBlastX	DNA_TcMar-Fot1	3972	4976	160	-	.	.
scaffold20	subtractBed	intrn	4972	5505	.	-	.	Parent=CGI_10023555;
	scaffold20	WUBlastX	DNA_TcMar-Fot1	4972	5505	144	-	.	.
scaffold20	subtractBed	intrn	4296	4970	.	-	.	Parent=CGI_10023555;
	scaffold20	WUBlastX	DNA_TcMar-Fot1	4296	4970	197	-	.	.
scaffold20	subtractBed	intrn	30214	30672	.	-	.	Parent=CGI_10023556;
	scaffold20	WUBlastX	LINE_RTE-X	30214	30672	92	+	.	.
scaffold20	subtractBed	intrn	30325	30666	.	-	.	Parent=CGI_10023556;
	scaffold20	WUBlastX	LINE_RTE-X	30325	30666	169	+	.	.
scaffold20	subtractBed	intrn	30118	30786	.	-	.	Parent=CGI_10023556;
	scaffold20	WUBlastX	LINE_RTE-X	30118	30786	61	+	.	.
scaffold20	subtractBed	intrn	31473	31640	.	-	.	Parent=CGI_10023556;
	scaffold20	WUBlastX	DNA_MuDR	31413	31640	73	+	.	.
scaffold20	subtractBed	intrn	31874	31908	.	-	.	Parent=CGI_10023556;
	scaffold20	WUBlastX	DNA_MuDR	31813	31908	41	+	.	.
scaffold20	subtractBed	intrn	30214	30672	.	+	.	Parent=CGI_10023557;
	scaffold20	WUBlastX	LINE_RTE-X	30214	30672	92	+	.	.
scaffold20	subtractBed	intrn	30325	30666	.	+	.	Parent=CGI_10023557;
	scaffold20	WUBlastX	LINE_RTE-X	30325	30666	169	+	.	.
scaffold20	subtractBed	intrn	30118	30786	.	+	.	Parent=CGI_10023557;
	scaffold20	WUBlastX	LINE_RTE-X	30118	30786	61	+	.	.
scaffold20	subtractBed	intrn	31473	31640	.	+	.	Parent=CGI_10023557;
	scaffold20	WUBlastX	DNA_MuDR	31413	31640	73	+	.	.
scaffold20	subtractBed	intrn	31874	31908	.	+	.	Parent=CGI_10023557;
	scaffold20	WUBlastX	DNA_MuDR	31813	31908	41	+	.	.
scaffold20	subtractBed	intrn	52043	52772	.	-	.	Parent=CGI_10023561;
	scaffold20	TRF	Tandem_Repeat	52043	52772	796	+	.	.
scaffold20	subtractBed	intrn	61394	62290	.	-	.	Parent=CGI_10023561;
	scaffold20	TRF	Tandem_Repeat	61394	62290	1602	+	.	.
scaffold20	subtractBed	intrn	88626	89547	.	+	.	Parent=CGI_10023562;
	scaffold20	TRF	Tandem_Repeat	88626	89547	1359	+	.	.
scaffold20	subtractBed	intrn	89752	89789	.	+	.	Parent=CGI_10023562;
	scaffold20	TRF	Tandem_Repeat	89752	89789	67	+	.	.
scaffold20	subtractBed	intrn	86058	86059	.	+	.	Parent=CGI_10023562;
	scaffold20	WUBlastX	DNA_TcMar-Pogo	85970	86059	30	-	.	.
scaffold20	subtractBed	intrn	86062	86337	.	+	.	Parent=CGI_10023562;
	scaffold20	WUBlastX	DNA_TcMar-Pogo	86062	86337	45	-	.	.
scaffold20	subtractBed	intrn	111694	112784	.	-	.	Parent=CGI_10023563;
	scaffold20	TRF	Tandem_Repeat	111694	112784	1540	+	.	.
scaffold20	subtractBed	intrn	120572	120617	.	-	.	Parent=CGI_10023563;
	scaffold20	TRF	Tandem_Repeat	120572	120617	51	+	.	.
scaffold20	subtractBed	intrn	127532	127587	.	-	.	Parent=CGI_10023563;
	scaffold20	TRF	Tandem_Repeat	127532	127587	112	+	.	.
scaffold20	subtractBed	intrn	132992	133678	.	-	.	Parent=CGI_10023563;
	scaffold20	WUBlastX	LINE_L2	132992	133678	236	+	.	.
scaffold20	subtractBed	intrn	132898	132942	.	-	.	Parent=CGI_10023563;
	scaffold20	WUBlastX	LINE_Rex-Babar	132898	132942	20	+	.	.
scaffold20	subtractBed	intrn	132992	133678	.	+	.	Parent=CGI_10023564;
	scaffold20	WUBlastX	LINE_L2	132992	133678	236	+	.	.
scaffold20	subtractBed	intrn	132898	132942	.	+	.	Parent=CGI_10023564;
	scaffold20	WUBlastX	LINE_Rex-Babar	132898	132942	20	+	.	.
scaffold20	subtractBed	intrn	168373	168416	.	+	.	Parent=CGI_10023564;
	scaffold20	TRF	Tandem_Repeat	168373	168416	88	+	.	.
scaffold20	subtractBed	intrn	177862	177899	.	+	.	Parent=CGI_10023564;
	scaffold20	TRF	Tandem_Repeat	177862	177899	76	+	.	.
scaffold20	subtractBed	intrn	182326	182409	.	+	.	Parent=CGI_10023564;
	scaffold20	TRF	Tandem_Repeat	182326	182409	64	+	.	.
scaffold20	subtractBed	intrn	182326	182414	.	+	.	Parent=CGI_10023564;
	scaffold20	TRF	Tandem_Repeat	182326	182414	81	+	.	.
scaffold20	subtractBed	intrn	182326	182412	.	+	.	Parent=CGI_10023564;
	scaffold20	TRF	Tandem_Repeat	182326	182412	63	+	.	.
scaffold20	subtractBed	intrn	206630	206668	.	+	.	Parent=CGI_10023565;
	scaffold20	TRF	Tandem_Repeat	206630	206668	78	+	.	.
scaffold20	subtractBed	intrn	210972	211077	.	+	.	Parent=CGI_10023565;
	scaffold20	TRF	Tandem_Repeat	210972	211077	83	+	.	.
scaffold20	subtractBed	intrn	211482	212153	.	+	.	Parent=CGI_10023565;
	scaffold20	WUBlastX	LINE_CR1	211482	212153	196	+	.	.
scaffold20	subtractBed	intrn	248445	249134	.	-	.	Parent=CGI_10023567;
	scaffold20	TRF	Tandem_Repeat	248445	249134	704	+	.	.
scaffold20	subtractBed	intrn	252210	252328	.	+	.	Parent=CGI_10023568;
	scaffold20	TRF	Tandem_Repeat	252210	252328	184	+	.	.
scaffold20	subtractBed	intrn	261222	261255	.	-	.	Parent=CGI_10023569;
	scaffold20	TRF	Tandem_Repeat	261222	261255	59	+	.	.
scaffold20	subtractBed	intrn	293572	293623	.	+	.	Parent=CGI_10023571;
	scaffold20	TRF	Tandem_Repeat	293572	293623	77	+	.	.
scaffold20	subtractBed	intrn	305361	305406	.	-	.	Parent=CGI_10023572;
	scaffold20	TRF	Tandem_Repeat	305361	305406	67	+	.	.
scaffold20	subtractBed	intrn	305601	305921	.	-	.	Parent=CGI_10023572;
	scaffold20	TRF	Tandem_Repeat	305601	305921	579	+	.	.
scaffold20	subtractBed	intrn	388327	389034	.	+	.	Parent=CGI_10023580;
	scaffold20	TRF	Tandem_Repeat	388327	389034	476	+	.	.
scaffold20	subtractBed	intrn	388327	389034	.	+	.	Parent=CGI_10023580;
	scaffold20	TRF	Tandem_Repeat	388327	389034	574	+	.	.
scaffold20	subtractBed	intrn	388351	389034	.	+	.	Parent=CGI_10023580;
	scaffold20	TRF	Tandem_Repeat	388351	389034	567	+	.	.
scaffold20	subtractBed	intrn	394490	394676	.	+	.	Parent=CGI_10023580;
	scaffold20	TRF	Tandem_Repeat	394490	394676	268	+	.	.
scaffold20	subtractBed	intrn	394490	394707	.	+	.	Parent=CGI_10023580;
	scaffold20	TRF	Tandem_Repeat	394490	394707	211	+	.	.
scaffold20	subtractBed	intrn	402148	402377	.	+	.	Parent=CGI_10023582;
	scaffold20	TRF	Tandem_Repeat	402112	402377	532	+	.	.
scaffold20	subtractBed	intrn	407858	407968	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	407858	407968	78	+	.	.
scaffold20	subtractBed	intrn	408425	408501	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	408425	408501	109	+	.	.
scaffold20	subtractBed	intrn	417763	417978	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	417763	417978	279	+	.	.
scaffold20	subtractBed	intrn	418556	418601	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	418556	418601	57	+	.	.
scaffold20	subtractBed	intrn	418557	418598	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	418557	418598	50	+	.	.
scaffold20	subtractBed	intrn	419820	421069	.	-	.	Parent=CGI_10023583;
	scaffold20	TRF	Tandem_Repeat	419820	421069	1785	+	.	.
scaffold20	subtractBed	intrn	407858	407968	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	407858	407968	78	+	.	.
scaffold20	subtractBed	intrn	408425	408501	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	408425	408501	109	+	.	.
scaffold20	subtractBed	intrn	417763	417978	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	417763	417978	279	+	.	.
scaffold20	subtractBed	intrn	418556	418601	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	418556	418601	57	+	.	.
scaffold20	subtractBed	intrn	418557	418598	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	418557	418598	50	+	.	.
scaffold20	subtractBed	intrn	419820	421069	.	+	.	Parent=CGI_10023584;
	scaffold20	TRF	Tandem_Repeat	419820	421069	1785	+	.	.
scaffold20	subtractBed	intrn	606406	606463	.	+	.	Parent=CGI_10023592;
	scaffold20	TRF	Tandem_Repeat	606406	606463	116	+	.	.
scaffold20	subtractBed	intrn	607887	607930	.	+	.	Parent=CGI_10023592;
	scaffold20	TRF	Tandem_Repeat	607887	607930	88	+	.	.
scaffold20	subtractBed	intrn	617786	617820	.	+	.	Parent=CGI_10023592;
	scaffold20	TRF	Tandem_Repeat	617786	617820	70	+	.	.
scaffold20	subtractBed	intrn	621620	621663	.	+	.	Parent=CGI_10023592;
	scaffold20	TRF	Tandem_Repeat	621620	621663	88	+	.	.
scaffold20	subtractBed	intrn	635589	635661	.	-	.	Parent=CGI_10023593;
	scaffold20	TRF	Tandem_Repeat	635589	635661	146	+	.	.
scaffold20	subtractBed	intrn	839908	839938	.	-	.	Parent=CGI_10023600;
	scaffold20	TRF	Tandem_Repeat	839908	839938	62	+	.	.
scaffold20	subtractBed	intrn	841861	842831	.	-	.	Parent=CGI_10023600;
	scaffold20	TRF	Tandem_Repeat	841861	842868	1483	+	.	.
scaffold20	subtractBed	intrn	853990	854192	.	-	.	Parent=CGI_10023601;
	scaffold20	TRF	Tandem_Repeat	853990	854202	390	+	.	.
scaffold200	subtractBed	intrn	14773	14812	.	-	.	Parent=CGI_10006218;
	scaffold200	TRF	Tandem_Repeat	14773	14812	80	+	.	.
scaffold200	subtractBed	intrn	14970	15257	.	-	.	Parent=CGI_10006218;
	scaffold200	WUBlastX	LINE_RTE-BovB	14970	15257	45	+	.	.
scaffold200	subtractBed	intrn	15084	15263	.	-	.	Parent=CGI_10006218;
	scaffold200	WUBlastX	LINE_RTE-BovB	15084	15263	77	+	.	.
scaffold200	subtractBed	intrn	33546	33800	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	33546	33800	321	+	.	.
scaffold200	subtractBed	intrn	34551	35714	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	34551	35714	1251	+	.	.
scaffold200	subtractBed	intrn	35767	35819	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	35767	35819	106	+	.	.
scaffold200	subtractBed	intrn	36684	36712	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	36684	36712	58	+	.	.
scaffold200	subtractBed	intrn	37031	37071	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	37031	37071	82	+	.	.
scaffold200	subtractBed	intrn	37191	37260	.	+	.	Parent=CGI_10006223;
	scaffold200	TRF	Tandem_Repeat	37191	37260	131	+	.	.
scaffold200	subtractBed	intrn	46661	46961	.	+	.	Parent=CGI_10006224;
	scaffold200	WUBlastX	LTR_Gypsy	46242	46961	64	+	.	.
scaffold200	subtractBed	intrn	48797	48842	.	+	.	Parent=CGI_10006224;
	scaffold200	TRF	Tandem_Repeat	48797	48842	74	+	.	.
scaffold200	subtractBed	intrn	136330	136396	.	-	.	Parent=CGI_10006229;
	scaffold200	TRF	Tandem_Repeat	136330	136396	89	+	.	.
scaffold203	subtractBed	intrn	6170	6202	.	+	.	Parent=CGI_10021060;
	scaffold203	TRF	Tandem_Repeat	6170	6202	57	+	.	.
scaffold203	subtractBed	intrn	6360	6400	.	+	.	Parent=CGI_10021060;
	scaffold203	TRF	Tandem_Repeat	6360	6400	50	+	.	.
scaffold203	subtractBed	intrn	6398	6447	.	+	.	Parent=CGI_10021060;
	scaffold203	TRF	Tandem_Repeat	6398	6447	100	+	.	.
scaffold203	subtractBed	intrn	77203	77532	.	+	.	Parent=CGI_10021063;
	scaffold203	WUBlastX	LINE_RTE-X	77203	77532	64	-	.	.
scaffold203	subtractBed	intrn	80167	80209	.	+	.	Parent=CGI_10021063;
	scaffold203	TRF	Tandem_Repeat	80167	80209	52	+	.	.
scaffold203	subtractBed	intrn	86491	87122	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	86491	87122	500	+	.	.
scaffold203	subtractBed	intrn	86505	87125	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	86505	87125	207	+	.	.
scaffold203	subtractBed	intrn	86491	87122	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	86491	87122	403	+	.	.
scaffold203	subtractBed	intrn	86493	87125	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	86493	87125	501	+	.	.
scaffold203	subtractBed	intrn	87152	87703	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	87152	87703	421	+	.	.
scaffold203	subtractBed	intrn	87152	87672	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	87152	87672	277	+	.	.
scaffold203	subtractBed	intrn	92391	92445	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	92391	92445	74	+	.	.
scaffold203	subtractBed	intrn	92385	92445	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	92385	92445	97	+	.	.
scaffold203	subtractBed	intrn	92615	93976	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	92615	93976	2123	+	.	.
scaffold203	subtractBed	intrn	103595	103696	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	103595	103696	62	+	.	.
scaffold203	subtractBed	intrn	103595	103696	.	+	.	Parent=CGI_10021064;
	scaffold203	TRF	Tandem_Repeat	103595	103696	114	+	.	.
scaffold203	subtractBed	intrn	111559	111600	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_TcMar-Marin	111559	111600	25	-	.	.
scaffold203	subtractBed	intrn	112302	112457	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_TcMar-Marin	112302	112457	92	-	.	.
scaffold203	subtractBed	intrn	108682	109695	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_Crypton	108682	109695	609	-	.	.
scaffold203	subtractBed	intrn	112486	112896	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_TcMar-Marin	112486	112896	68	-	.	.
scaffold203	subtractBed	intrn	111409	111600	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_TcMar-Marin	111409	111600	23	-	.	.
scaffold203	subtractBed	intrn	112242	112559	.	+	.	Parent=CGI_10021064;
	scaffold203	WUBlastX	DNA_TcMar-Marin	112242	112559	22	-	.	.
scaffold203	subtractBed	intrn	243467	244262	.	+	.	Parent=CGI_10021067;
	scaffold203	TRF	Tandem_Repeat	243467	244262	1324	+	.	.
scaffold203	subtractBed	intrn	244271	244330	.	+	.	Parent=CGI_10021067;
	scaffold203	TRF	Tandem_Repeat	244271	244330	84	+	.	.
scaffold203	subtractBed	intrn	252076	252105	.	+	.	Parent=CGI_10021067;
	scaffold203	TRF	Tandem_Repeat	252076	252105	51	+	.	.
scaffold203	subtractBed	intrn	256449	256950	.	+	.	Parent=CGI_10021067;
	scaffold203	TRF	Tandem_Repeat	256449	256950	445	+	.	.
scaffold203	subtractBed	intrn	257691	257735	.	+	.	Parent=CGI_10021067;
	scaffold203	TRF	Tandem_Repeat	257691	257735	63	+	.	.
scaffold203	subtractBed	intrn	381464	381490	.	+	.	Parent=CGI_10021070;
	scaffold203	TRF	Tandem_Repeat	381464	381490	54	+	.	.
scaffold203	subtractBed	intrn	396741	396765	.	+	.	Parent=CGI_10021070;
	scaffold203	TRF	Tandem_Repeat	396741	396765	50	+	.	.
scaffold203	subtractBed	intrn	397563	397976	.	+	.	Parent=CGI_10021070;
	scaffold203	WUBlastX	DNA_Sola	397563	397976	92	+	.	.
scaffold203	subtractBed	intrn	397949	398395	.	+	.	Parent=CGI_10021070;
	scaffold203	WUBlastX	DNA_Sola	397949	398395	185	+	.	.
scaffold203	subtractBed	intrn	413003	413030	.	+	.	Parent=CGI_10021070;
	scaffold203	TRF	Tandem_Repeat	413003	413030	56	+	.	.
scaffold203	subtractBed	intrn	381464	381490	.	-	.	Parent=CGI_10021071;
	scaffold203	TRF	Tandem_Repeat	381464	381490	54	+	.	.
scaffold203	subtractBed	intrn	396741	396765	.	-	.	Parent=CGI_10021071;
	scaffold203	TRF	Tandem_Repeat	396741	396765	50	+	.	.
scaffold203	subtractBed	intrn	397563	397976	.	-	.	Parent=CGI_10021071;
	scaffold203	WUBlastX	DNA_Sola	397563	397976	92	+	.	.
scaffold203	subtractBed	intrn	397949	398395	.	-	.	Parent=CGI_10021071;
	scaffold203	WUBlastX	DNA_Sola	397949	398395	185	+	.	.
scaffold203	subtractBed	intrn	425854	426126	.	+	.	Parent=CGI_10021072;
	scaffold203	WUBlastX	LINE_RTE-X	425854	426126	61	-	.	.
scaffold203	subtractBed	intrn	425695	426153	.	+	.	Parent=CGI_10021072;
	scaffold203	WUBlastX	LINE_RTE-X	425695	426153	40	-	.	.
scaffold203	subtractBed	intrn	437063	437257	.	+	.	Parent=CGI_10021073;
	scaffold203	TRF	Tandem_Repeat	437063	437257	327	+	.	.
scaffold203	subtractBed	intrn	446675	446736	.	+	.	Parent=CGI_10021073;
	scaffold203	TRF	Tandem_Repeat	446675	446736	124	+	.	.
scaffold203	subtractBed	intrn	446954	447002	.	+	.	Parent=CGI_10021073;
	scaffold203	TRF	Tandem_Repeat	446954	447002	73	+	.	.
scaffold203	subtractBed	intrn	453175	453552	.	+	.	Parent=CGI_10021073;
	scaffold203	WUBlastX	LINE_RTE-X	453175	453552	23	-	.	.
scaffold203	subtractBed	intrn	453340	453591	.	+	.	Parent=CGI_10021073;
	scaffold203	WUBlastX	LINE_RTE-X	453340	453591	52	-	.	.
scaffold203	subtractBed	intrn	457180	457788	.	+	.	Parent=CGI_10021073;
	scaffold203	TRF	Tandem_Repeat	457180	457788	634	+	.	.
scaffold203	subtractBed	intrn	457180	457785	.	+	.	Parent=CGI_10021073;
	scaffold203	TRF	Tandem_Repeat	457180	457785	602	+	.	.
scaffold203	subtractBed	intrn	534773	534805	.	-	.	Parent=CGI_10021077;
	scaffold203	TRF	Tandem_Repeat	534773	534805	66	+	.	.
scaffold203	subtractBed	intrn	567925	568019	.	+	.	Parent=CGI_10021079;
	scaffold203	TRF	Tandem_Repeat	567925	568019	163	+	.	.
scaffold203	subtractBed	intrn	569819	569894	.	+	.	Parent=CGI_10021079;
	scaffold203	TRF	Tandem_Repeat	569819	569894	127	+	.	.
scaffold203	subtractBed	intrn	573997	574039	.	-	.	Parent=CGI_10021080;
	scaffold203	TRF	Tandem_Repeat	573997	574039	86	+	.	.
scaffold203	subtractBed	intrn	600639	600691	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	600639	600691	106	+	.	.
scaffold203	subtractBed	intrn	603663	603698	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	603663	603698	72	+	.	.
scaffold203	subtractBed	intrn	610781	610955	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	610781	610955	145	+	.	.
scaffold203	subtractBed	intrn	610775	610948	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	610775	610948	161	+	.	.
scaffold203	subtractBed	intrn	615057	615286	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	615057	615286	239	+	.	.
scaffold203	subtractBed	intrn	620192	620298	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	620192	620298	117	+	.	.
scaffold203	subtractBed	intrn	621125	621172	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	621125	621172	87	+	.	.
scaffold203	subtractBed	intrn	624126	624239	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	624126	624239	140	+	.	.
scaffold203	subtractBed	intrn	628185	628388	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	628185	628388	89	-	.	.
scaffold203	subtractBed	intrn	628610	629374	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	628610	629374	103	-	.	.
scaffold203	subtractBed	intrn	628143	628385	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	628143	628385	75	-	.	.
scaffold203	subtractBed	intrn	628107	628337	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	628107	628337	30	-	.	.
scaffold203	subtractBed	intrn	629373	629537	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	629373	629537	71	-	.	.
scaffold203	subtractBed	intrn	628979	629326	.	+	.	Parent=CGI_10021081;
	scaffold203	WUBlastX	LINE_RTE-X	628979	629326	104	-	.	.
scaffold203	subtractBed	intrn	632245	632333	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	632245	632333	142	+	.	.
scaffold203	subtractBed	intrn	632878	633176	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	632878	633176	264	+	.	.
scaffold203	subtractBed	intrn	635275	635309	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	635275	635309	70	+	.	.
scaffold203	subtractBed	intrn	635672	636200	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	635672	636200	772	+	.	.
scaffold203	subtractBed	intrn	639957	640193	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	639957	640193	134	+	.	.
scaffold203	subtractBed	intrn	639981	640169	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	639981	640169	258	+	.	.
scaffold203	subtractBed	intrn	639981	640880	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	639981	640880	556	+	.	.
scaffold203	subtractBed	intrn	639999	640714	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	639999	640714	549	+	.	.
scaffold203	subtractBed	intrn	640213	640321	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	640213	640321	103	+	.	.
scaffold203	subtractBed	intrn	640366	640714	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	640366	640714	398	+	.	.
scaffold203	subtractBed	intrn	640794	640904	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	640794	640904	120	+	.	.
scaffold203	subtractBed	intrn	642441	642650	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	642441	642650	213	+	.	.
scaffold203	subtractBed	intrn	642441	642649	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	642441	642649	241	+	.	.
scaffold203	subtractBed	intrn	644892	645161	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	644892	645161	382	+	.	.
scaffold203	subtractBed	intrn	645841	645884	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	645841	645884	70	+	.	.
scaffold203	subtractBed	intrn	647702	647901	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	647702	647901	391	+	.	.
scaffold203	subtractBed	intrn	647663	647901	.	+	.	Parent=CGI_10021081;
	scaffold203	TRF	Tandem_Repeat	647663	647901	327	+	.	.
scaffold204	subtractBed	intrn	38035	38078	.	-	.	Parent=CGI_10026088;
	scaffold204	TRF	Tandem_Repeat	38035	38078	88	+	.	.
scaffold204	subtractBed	intrn	43600	43782	.	-	.	Parent=CGI_10026088;
	scaffold204	WUBlastX	DNA_TcMar-Marin	43600	43782	54	+	.	.
scaffold204	subtractBed	intrn	72021	72274	.	-	.	Parent=CGI_10026091;
	scaffold204	TRF	Tandem_Repeat	72021	72274	276	+	.	.
scaffold204	subtractBed	intrn	75989	76932	.	-	.	Parent=CGI_10026091;
	scaffold204	TRF	Tandem_Repeat	75989	76932	1656	+	.	.
scaffold204	subtractBed	intrn	77763	77987	.	-	.	Parent=CGI_10026091;
	scaffold204	TRF	Tandem_Repeat	77763	77987	369	+	.	.
scaffold204	subtractBed	intrn	87640	88197	.	+	.	Parent=CGI_10026092;
	scaffold204	TRF	Tandem_Repeat	87612	88197	947	+	.	.
scaffold204	subtractBed	intrn	112169	112223	.	-	.	Parent=CGI_10026094;
	scaffold204	TRF	Tandem_Repeat	112169	112223	103	+	.	.
scaffold204	subtractBed	intrn	121296	121334	.	-	.	Parent=CGI_10026095;
	scaffold204	TRF	Tandem_Repeat	121296	121334	71	+	.	.
scaffold204	subtractBed	intrn	138972	139017	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	138972	139017	92	+	.	.
scaffold204	subtractBed	intrn	142487	142612	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	142487	142612	146	+	.	.
scaffold204	subtractBed	intrn	150262	150403	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	150262	150403	106	+	.	.
scaffold204	subtractBed	intrn	150452	150612	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	150452	150612	135	+	.	.
scaffold204	subtractBed	intrn	150470	150620	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	150470	150620	144	+	.	.
scaffold204	subtractBed	intrn	150712	150805	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	150712	150805	91	+	.	.
scaffold204	subtractBed	intrn	152361	152411	.	+	.	Parent=CGI_10026096;
	scaffold204	TRF	Tandem_Repeat	152361	152411	102	+	.	.
scaffold204	subtractBed	intrn	138972	139017	.	-	.	Parent=CGI_10026097;
	scaffold204	TRF	Tandem_Repeat	138972	139017	92	+	.	.
scaffold204	subtractBed	intrn	184477	185060	.	+	.	Parent=CGI_10026098;
	scaffold204	TRF	Tandem_Repeat	184477	185082	408	+	.	.
scaffold204	subtractBed	intrn	189773	189835	.	+	.	Parent=CGI_10026098;
	scaffold204	TRF	Tandem_Repeat	189773	189835	126	+	.	.
scaffold204	subtractBed	intrn	284217	284257	.	-	.	Parent=CGI_10026102;
	scaffold204	TRF	Tandem_Repeat	284217	284257	50	+	.	.
scaffold204	subtractBed	intrn	288547	288598	.	-	.	Parent=CGI_10026102;
	scaffold204	TRF	Tandem_Repeat	288547	288598	95	+	.	.
scaffold204	subtractBed	intrn	292143	292196	.	-	.	Parent=CGI_10026102;
	scaffold204	TRF	Tandem_Repeat	292143	292196	108	+	.	.
scaffold204	subtractBed	intrn	294211	294263	.	-	.	Parent=CGI_10026102;
	scaffold204	TRF	Tandem_Repeat	294211	294263	97	+	.	.
scaffold204	subtractBed	intrn	294211	294285	.	-	.	Parent=CGI_10026102;
	scaffold204	TRF	Tandem_Repeat	294211	294285	87	+	.	.
scaffold204	subtractBed	intrn	299963	300190	.	-	.	Parent=CGI_10026102;
	scaffold204	WUBlastX	LTR_Ngaro	299963	300190	63	+	.	.
scaffold204	subtractBed	intrn	300005	300184	.	-	.	Parent=CGI_10026102;
	scaffold204	WUBlastX	LTR_Ngaro	300005	300184	86	+	.	.
scaffold204	subtractBed	intrn	300059	300184	.	-	.	Parent=CGI_10026102;
	scaffold204	WUBlastX	LTR_Ngaro	300059	300184	88	+	.	.
scaffold204	subtractBed	intrn	321505	321684	.	-	.	Parent=CGI_10026103;
	scaffold204	WUBlastX	LINE_L2	321505	321684	54	+	.	.
scaffold204	subtractBed	intrn	320821	320964	.	-	.	Parent=CGI_10026103;
	scaffold204	WUBlastX	LINE_CR1-L2	320821	320964	26	+	.	.
scaffold204	subtractBed	intrn	320815	321213	.	-	.	Parent=CGI_10026103;
	scaffold204	WUBlastX	LINE_CR1-L2	320815	321213	26	+	.	.
scaffold204	subtractBed	intrn	394571	394572	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	394288	394572	25	+	.	.
scaffold204	subtractBed	intrn	394571	394725	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	394336	394725	23	+	.	.
scaffold204	subtractBed	intrn	395170	395295	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	395170	395295	31	+	.	.
scaffold204	subtractBed	intrn	395453	395459	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	395453	395677	27	+	.	.
scaffold204	subtractBed	intrn	395227	395301	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	395227	395301	42	+	.	.
scaffold204	subtractBed	intrn	395669	395677	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	395453	395677	27	+	.	.
scaffold204	subtractBed	intrn	405621	405856	.	+	.	Parent=CGI_10026106;
	scaffold204	TRF	Tandem_Repeat	405621	405856	190	+	.	.
scaffold204	subtractBed	intrn	405646	405822	.	+	.	Parent=CGI_10026106;
	scaffold204	TRF	Tandem_Repeat	405646	405822	151	+	.	.
scaffold204	subtractBed	intrn	399826	400074	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	LINE_CR1-L2	399826	400074	47	+	.	.
scaffold204	subtractBed	intrn	399883	400065	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	LINE_CR1-L2	399883	400065	73	+	.	.
scaffold204	subtractBed	intrn	407459	407782	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	LINE_CR1	407459	407782	22	-	.	.
scaffold204	subtractBed	intrn	411588	411601	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	411588	411800	91	+	.	.
scaffold204	subtractBed	intrn	413254	413358	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	413254	413697	178	+	.	.
scaffold204	subtractBed	intrn	411798	411800	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	411588	411800	91	+	.	.
scaffold204	subtractBed	intrn	414185	414186	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	414185	414334	66	+	.	.
scaffold204	subtractBed	intrn	413697	413697	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	413254	413697	178	+	.	.
scaffold204	subtractBed	intrn	413816	414070	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	413816	414070	217	+	.	.
scaffold204	subtractBed	intrn	414185	414186	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	414185	414403	49	+	.	.
scaffold204	subtractBed	intrn	413873	414139	.	+	.	Parent=CGI_10026106;
	scaffold204	WUBlastX	DNA_Harbinger	413873	414139	34	+	.	.
scaffold204	subtractBed	intrn	422715	423035	.	-	.	Parent=CGI_10026107;
	scaffold204	TRF	Tandem_Repeat	422715	423035	198	+	.	.
scaffold204	subtractBed	intrn	422715	423014	.	-	.	Parent=CGI_10026107;
	scaffold204	TRF	Tandem_Repeat	422715	423014	238	+	.	.
scaffold204	subtractBed	intrn	422715	423020	.	-	.	Parent=CGI_10026107;
	scaffold204	TRF	Tandem_Repeat	422715	423020	230	+	.	.
scaffold204	subtractBed	intrn	423599	423870	.	-	.	Parent=CGI_10026107;
	scaffold204	TRF	Tandem_Repeat	423599	423870	436	+	.	.
scaffold204	subtractBed	intrn	423590	423870	.	-	.	Parent=CGI_10026107;
	scaffold204	TRF	Tandem_Repeat	423590	423870	303	+	.	.
scaffold204	subtractBed	intrn	427844	431401	.	-	.	Parent=CGI_10026107;
	scaffold204	WUBlastX	LINE_L1-Tx1	427844	431401	1118	-	.	.
scaffold204	subtractBed	intrn	489039	489369	.	-	.	Parent=CGI_10026114;
	scaffold204	TRF	Tandem_Repeat	489039	489369	100	+	.	.
scaffold204	subtractBed	intrn	489039	489382	.	-	.	Parent=CGI_10026114;
	scaffold204	TRF	Tandem_Repeat	489039	489394	256	+	.	.
scaffold204	subtractBed	intrn	489063	489382	.	-	.	Parent=CGI_10026114;
	scaffold204	TRF	Tandem_Repeat	489063	489394	243	+	.	.
scaffold204	subtractBed	intrn	499733	499763	.	-	.	Parent=CGI_10026115;
	scaffold204	TRF	Tandem_Repeat	499733	499763	62	+	.	.
scaffold204	subtractBed	intrn	519377	519661	.	-	.	Parent=CGI_10026116;
	scaffold204	TRF	Tandem_Repeat	519377	519674	463	+	.	.
scaffold204	subtractBed	intrn	561247	561351	.	+	.	Parent=CGI_10026117;
	scaffold204	WUBlastX	DNA_Crypton	561247	561351	22	+	.	.
scaffold204	subtractBed	intrn	577550	577891	.	+	.	Parent=CGI_10026118;
	scaffold204	WUBlastX	DNA_TcMar-ISRm1	577442	577891	40	+	.	.
scaffold204	subtractBed	intrn	580322	580412	.	+	.	Parent=CGI_10026118;
	scaffold204	TRF	Tandem_Repeat	580322	580412	98	+	.	.
scaffold204	subtractBed	intrn	580650	580688	.	+	.	Parent=CGI_10026118;
	scaffold204	TRF	Tandem_Repeat	580650	580688	78	+	.	.
scaffold204	subtractBed	intrn	595826	595883	.	+	.	Parent=CGI_10026118;
	scaffold204	WUBlastX	DNA_Crypton	595826	596782	109	+	.	.
scaffold204	subtractBed	intrn	609408	609628	.	+	.	Parent=CGI_10026119;
	scaffold204	WUBlastX	DNA_PiggyBac	609341	609628	23	+	.	.
scaffold204	subtractBed	intrn	626281	627054	.	-	.	Parent=CGI_10026120;
	scaffold204	TRF	Tandem_Repeat	626281	627054	1110	+	.	.
scaffold204	subtractBed	intrn	638346	638654	.	+	.	Parent=CGI_10026121;
	scaffold204	WUBlastX	LINE_L1-Tx1	638346	638654	59	-	.	.
scaffold204	subtractBed	intrn	638082	638684	.	+	.	Parent=CGI_10026121;
	scaffold204	WUBlastX	LINE_L1-Tx1	638082	638684	43	-	.	.
scaffold204	subtractBed	intrn	653523	653579	.	-	.	Parent=CGI_10026123;
	scaffold204	TRF	Tandem_Repeat	653523	653579	114	+	.	.
scaffold204	subtractBed	intrn	683931	684009	.	-	.	Parent=CGI_10026125;
	scaffold204	TRF	Tandem_Repeat	683931	684009	149	+	.	.
scaffold204	subtractBed	intrn	684176	684223	.	-	.	Parent=CGI_10026125;
	scaffold204	TRF	Tandem_Repeat	684176	684223	61	+	.	.
scaffold204	subtractBed	intrn	684176	684223	.	-	.	Parent=CGI_10026125;
	scaffold204	TRF	Tandem_Repeat	684176	684223	55	+	.	.
scaffold204	subtractBed	intrn	697311	697528	.	+	.	Parent=CGI_10026126;
	scaffold204	TRF	Tandem_Repeat	697311	697528	147	+	.	.
scaffold204	subtractBed	intrn	700938	700979	.	+	.	Parent=CGI_10026127;
	scaffold204	TRF	Tandem_Repeat	700938	700979	84	+	.	.
scaffold204	subtractBed	intrn	704025	704061	.	+	.	Parent=CGI_10026127;
	scaffold204	TRF	Tandem_Repeat	704025	704061	74	+	.	.
scaffold204	subtractBed	intrn	711622	711676	.	+	.	Parent=CGI_10026127;
	scaffold204	TRF	Tandem_Repeat	711622	711676	60	+	.	.
scaffold204	subtractBed	intrn	713051	713085	.	+	.	Parent=CGI_10026127;
	scaffold204	TRF	Tandem_Repeat	713051	713085	70	+	.	.
scaffold204	subtractBed	intrn	775334	775385	.	+	.	Parent=CGI_10026130;
	scaffold204	TRF	Tandem_Repeat	775334	775385	104	+	.	.
scaffold204	subtractBed	intrn	819949	819987	.	+	.	Parent=CGI_10026134;
	scaffold204	TRF	Tandem_Repeat	819949	819987	78	+	.	.
scaffold204	subtractBed	intrn	820110	820137	.	+	.	Parent=CGI_10026134;
	scaffold204	TRF	Tandem_Repeat	820110	820137	56	+	.	.
scaffold204	subtractBed	intrn	820137	820164	.	+	.	Parent=CGI_10026134;
	scaffold204	TRF	Tandem_Repeat	820137	820164	56	+	.	.
scaffold204	subtractBed	intrn	821475	821819	.	+	.	Parent=CGI_10026134;
	scaffold204	WUBlastX	LINE_L1-Tx1	821475	821819	44	-	.	.
scaffold204	subtractBed	intrn	821346	821411	.	+	.	Parent=CGI_10026134;
	scaffold204	WUBlastX	LINE_L1-Tx1	821346	821411	27	-	.	.
scaffold204	subtractBed	intrn	821427	821726	.	+	.	Parent=CGI_10026134;
	scaffold204	WUBlastX	LINE_L1-Tx1	821427	821726	26	-	.	.
scaffold204	subtractBed	intrn	821955	822113	.	+	.	Parent=CGI_10026134;
	scaffold204	WUBlastX	LINE_L1-Tx1	821955	822113	23	-	.	.
scaffold204	subtractBed	intrn	822109	822399	.	+	.	Parent=CGI_10026134;
	scaffold204	WUBlastX	LINE_L1-Tx1	822109	822399	69	-	.	.
scaffold204	subtractBed	intrn	834608	834677	.	+	.	Parent=CGI_10026135;
	scaffold204	TRF	Tandem_Repeat	834608	834677	86	+	.	.
scaffold204	subtractBed	intrn	834607	834677	.	+	.	Parent=CGI_10026135;
	scaffold204	TRF	Tandem_Repeat	834607	834677	106	+	.	.
scaffold204	subtractBed	intrn	837984	838077	.	+	.	Parent=CGI_10026135;
	scaffold204	TRF	Tandem_Repeat	837984	838077	100	+	.	.
scaffold204	subtractBed	intrn	842437	842715	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_Penelope	842437	842715	58	+	.	.
scaffold204	subtractBed	intrn	842437	842658	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_Penelope	842437	842658	70	+	.	.
scaffold204	subtractBed	intrn	842437	842769	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_Penelope	842437	842769	47	+	.	.
scaffold204	subtractBed	intrn	850064	850405	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_CR1	850064	850405	113	+	.	.
scaffold204	subtractBed	intrn	849759	850046	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_CR1	849759	850046	81	+	.	.
scaffold204	subtractBed	intrn	849993	850058	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	LINE_CR1	849993	850058	30	+	.	.
scaffold204	subtractBed	intrn	850982	851068	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	DNA_Harbinger	850982	851068	26	+	.	.
scaffold204	subtractBed	intrn	850752	850844	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	DNA_Harbinger	850752	850844	52	+	.	.
scaffold204	subtractBed	intrn	851191	851376	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	DNA_Harbinger	851191	851376	89	+	.	.
scaffold204	subtractBed	intrn	853262	853729	.	+	.	Parent=CGI_10026136;
	scaffold204	WUBlastX	DNA_Kolobok-Hyd	853262	853729	28	-	.	.
scaffold204	subtractBed	intrn	915167	915326	.	+	.	Parent=CGI_10026137;
	scaffold204	TRF	Tandem_Repeat	915167	915326	169	+	.	.
scaffold204	subtractBed	intrn	915397	915537	.	+	.	Parent=CGI_10026137;
	scaffold204	TRF	Tandem_Repeat	915397	915537	104	+	.	.
scaffold204	subtractBed	intrn	936730	936741	.	+	.	Parent=CGI_10026139;
	scaffold204	WUBlastX	DNA_Chapaev	936535	936741	24	+	.	.
scaffold204	subtractBed	intrn	967309	967352	.	+	.	Parent=CGI_10026141;
	scaffold204	TRF	Tandem_Repeat	967309	967352	61	+	.	.
scaffold204	subtractBed	intrn	967310	967359	.	+	.	Parent=CGI_10026141;
	scaffold204	TRF	Tandem_Repeat	967310	967359	55	+	.	.
scaffold204	subtractBed	intrn	967383	968508	.	+	.	Parent=CGI_10026141;
	scaffold204	TRF	Tandem_Repeat	967383	968508	1682	+	.	.
scaffold204	subtractBed	intrn	997788	997817	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	997788	997817	51	+	.	.
scaffold204	subtractBed	intrn	1010967	1011944	.	-	.	Parent=CGI_10026142;
	scaffold204	WUBlastX	LINE_L1-Tx1	1010967	1011944	494	-	.	.
scaffold204	subtractBed	intrn	1012266	1012272	.	-	.	Parent=CGI_10026142;
	scaffold204	WUBlastX	LINE_I	1012266	1012313	21	-	.	.
scaffold204	subtractBed	intrn	1014944	1015024	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	1014944	1015024	155	+	.	.
scaffold204	subtractBed	intrn	1026201	1026251	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	1026201	1026251	102	+	.	.
scaffold204	subtractBed	intrn	1027123	1027185	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	1027123	1027185	126	+	.	.
scaffold204	subtractBed	intrn	1028602	1028643	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	1028602	1028643	50	+	.	.
scaffold204	subtractBed	intrn	1030577	1030642	.	-	.	Parent=CGI_10026142;
	scaffold204	TRF	Tandem_Repeat	1030577	1030642	132	+	.	.
scaffold206	subtractBed	intrn	67616	67650	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	67616	67650	70	+	.	.
scaffold206	subtractBed	intrn	69409	69952	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	69409	69952	739	+	.	.
scaffold206	subtractBed	intrn	70824	70871	.	+	.	Parent=CGI_10011372;
	scaffold206	WUBlastX	LINE_RTE-X	70824	70871	26	+	.	.
scaffold206	subtractBed	intrn	76416	76665	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	76416	76665	182	+	.	.
scaffold206	subtractBed	intrn	76398	76728	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	76398	76728	311	+	.	.
scaffold206	subtractBed	intrn	78265	78478	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	78265	78478	170	+	.	.
scaffold206	subtractBed	intrn	78703	79244	.	+	.	Parent=CGI_10011372;
	scaffold206	TRF	Tandem_Repeat	78703	79244	426	+	.	.
scaffold206	subtractBed	intrn	79732	79805	.	+	.	Parent=CGI_10011372;
	scaffold206	WUBlastX	LTR_Gypsy	79716	79805	22	+	.	.
scaffold206	subtractBed	intrn	80148	80603	.	+	.	Parent=CGI_10011372;
	scaffold206	WUBlastX	LTR_Gypsy	80148	80603	129	+	.	.
scaffold206	subtractBed	intrn	80238	81962	.	+	.	Parent=CGI_10011372;
	scaffold206	WUBlastX	LTR_Gypsy	80238	81962	710	+	.	.
scaffold206	subtractBed	intrn	81372	82139	.	+	.	Parent=CGI_10011372;
	scaffold206	WUBlastX	LTR_Gypsy	81372	82139	236	+	.	.
scaffold206	subtractBed	intrn	113416	113803	.	-	.	Parent=CGI_10011373;
	scaffold206	TRF	Tandem_Repeat	113404	113803	277	+	.	.
scaffold206	subtractBed	intrn	113574	113763	.	-	.	Parent=CGI_10011373;
	scaffold206	TRF	Tandem_Repeat	113574	113763	118	+	.	.
scaffold206	subtractBed	intrn	128213	128449	.	-	.	Parent=CGI_10011374;
	scaffold206	WUBlastX	DNA_En-Spm	128213	128449	78	-	.	.
scaffold206	subtractBed	intrn	128162	128464	.	-	.	Parent=CGI_10011374;
	scaffold206	WUBlastX	DNA_En-Spm	128162	128464	78	-	.	.
scaffold206	subtractBed	intrn	128057	128494	.	-	.	Parent=CGI_10011374;
	scaffold206	WUBlastX	DNA_En-Spm	128057	128494	57	-	.	.
scaffold206	subtractBed	intrn	128485	128706	.	-	.	Parent=CGI_10011374;
	scaffold206	WUBlastX	DNA_En-Spm	128485	128706	95	-	.	.
scaffold206	subtractBed	intrn	131337	131406	.	-	.	Parent=CGI_10011374;
	scaffold206	TRF	Tandem_Repeat	131337	131406	140	+	.	.
scaffold206	subtractBed	intrn	163134	163169	.	+	.	Parent=CGI_10011377;
	scaffold206	TRF	Tandem_Repeat	163134	163169	54	+	.	.
scaffold206	subtractBed	intrn	179562	179620	.	+	.	Parent=CGI_10011378;
	scaffold206	TRF	Tandem_Repeat	179562	179620	109	+	.	.
scaffold206	subtractBed	intrn	190179	190207	.	+	.	Parent=CGI_10011380;
	scaffold206	TRF	Tandem_Repeat	190179	190207	58	+	.	.
scaffold206	subtractBed	intrn	197520	197725	.	+	.	Parent=CGI_10011380;
	scaffold206	TRF	Tandem_Repeat	197520	197725	300	+	.	.
scaffold206	subtractBed	intrn	210689	210749	.	-	.	Parent=CGI_10011381;
	scaffold206	TRF	Tandem_Repeat	210689	210749	77	+	.	.
scaffold208	subtractBed	intrn	8114	8166	.	+	.	Parent=CGI_10010019;
	scaffold208	TRF	Tandem_Repeat	8114	8166	106	+	.	.
scaffold208	subtractBed	intrn	8898	8925	.	+	.	Parent=CGI_10010019;
	scaffold208	TRF	Tandem_Repeat	8898	8925	56	+	.	.
scaffold208	subtractBed	intrn	82048	82085	.	-	.	Parent=CGI_10010022;
	scaffold208	TRF	Tandem_Repeat	82048	82085	76	+	.	.
scaffold208	subtractBed	intrn	92151	92177	.	-	.	Parent=CGI_10010023;
	scaffold208	TRF	Tandem_Repeat	92151	92177	54	+	.	.
scaffold208	subtractBed	intrn	98606	98646	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	98606	98646	82	+	.	.
scaffold208	subtractBed	intrn	100716	100937	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	100716	100937	195	+	.	.
scaffold208	subtractBed	intrn	100716	101148	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	100716	101148	201	+	.	.
scaffold208	subtractBed	intrn	100933	101148	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	100933	101148	108	+	.	.
scaffold208	subtractBed	intrn	104522	104552	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	104522	104552	62	+	.	.
scaffold208	subtractBed	intrn	104755	104820	.	-	.	Parent=CGI_10010024;
	scaffold208	TRF	Tandem_Repeat	104755	104820	132	+	.	.
scaffold208	subtractBed	intrn	116088	116228	.	-	.	Parent=CGI_10010026;
	scaffold208	WUBlastX	DNA_TcMar-Marin	116088	116228	31	+	.	.
scaffold208	subtractBed	intrn	116088	116267	.	-	.	Parent=CGI_10010026;
	scaffold208	WUBlastX	DNA_TcMar-Marin	116088	116267	28	+	.	.
scaffold208	subtractBed	intrn	122684	122902	.	-	.	Parent=CGI_10010027;
	scaffold208	WUBlastX	DNA_TcMar-Marin	122684	122902	20	+	.	.
scaffold208	subtractBed	intrn	215036	215078	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	215036	215078	50	+	.	.
scaffold208	subtractBed	intrn	216102	216141	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	216102	216141	80	+	.	.
scaffold208	subtractBed	intrn	220214	220262	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	220214	220262	98	+	.	.
scaffold208	subtractBed	intrn	228814	229014	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	228814	229014	276	+	.	.
scaffold208	subtractBed	intrn	228826	229337	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	228826	229337	390	+	.	.
scaffold208	subtractBed	intrn	228814	229303	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	228814	229303	362	+	.	.
scaffold208	subtractBed	intrn	229100	229344	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	229100	229344	220	+	.	.
scaffold208	subtractBed	intrn	236573	236615	.	-	.	Parent=CGI_10010034;
	scaffold208	TRF	Tandem_Repeat	236573	236615	50	+	.	.
scaffold209	subtractBed	intrn	83370	85577	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	83370	85577	3242	+	.	.
scaffold209	subtractBed	intrn	85961	86369	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	85961	86369	258	+	.	.
scaffold209	subtractBed	intrn	85930	86375	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	85930	86375	278	+	.	.
scaffold209	subtractBed	intrn	88206	88370	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	88206	88370	172	+	.	.
scaffold209	subtractBed	intrn	89438	90001	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	89438	90001	669	+	.	.
scaffold209	subtractBed	intrn	94809	95054	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	94809	95054	233	+	.	.
scaffold209	subtractBed	intrn	98693	99124	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	98645	99124	708	+	.	.
scaffold209	subtractBed	intrn	104541	107188	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	104541	107188	3875	+	.	.
scaffold209	subtractBed	intrn	119155	119233	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	119155	119233	95	+	.	.
scaffold209	subtractBed	intrn	123877	124206	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	123877	124206	349	+	.	.
scaffold209	subtractBed	intrn	127386	127538	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	127355	127538	278	+	.	.
scaffold209	subtractBed	intrn	127550	128231	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	127550	128231	743	+	.	.
scaffold209	subtractBed	intrn	132226	132801	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	132226	132801	881	+	.	.
scaffold209	subtractBed	intrn	134970	135165	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	134970	135165	223	+	.	.
scaffold209	subtractBed	intrn	135977	136241	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	135977	136241	331	+	.	.
scaffold209	subtractBed	intrn	136322	136892	.	+	.	Parent=CGI_10013481;
	scaffold209	TRF	Tandem_Repeat	136322	136892	801	+	.	.
scaffold209	subtractBed	intrn	104541	107188	.	-	.	Parent=CGI_10013482;
	scaffold209	TRF	Tandem_Repeat	104541	107188	3875	+	.	.
scaffold209	subtractBed	intrn	119155	119233	.	-	.	Parent=CGI_10013482;
	scaffold209	TRF	Tandem_Repeat	119155	119233	95	+	.	.
scaffold209	subtractBed	intrn	146154	146953	.	-	.	Parent=CGI_10013483;
	scaffold209	TRF	Tandem_Repeat	146154	146953	1351	+	.	.
scaffold209	subtractBed	intrn	146332	146559	.	-	.	Parent=CGI_10013483;
	scaffold209	TRF	Tandem_Repeat	146332	146559	102	+	.	.
scaffold209	subtractBed	intrn	163995	164443	.	+	.	Parent=CGI_10013485;
	scaffold209	TRF	Tandem_Repeat	163995	164443	156	+	.	.
scaffold209	subtractBed	intrn	164067	164456	.	+	.	Parent=CGI_10013485;
	scaffold209	TRF	Tandem_Repeat	164067	164456	458	+	.	.
scaffold209	subtractBed	intrn	169421	170089	.	+	.	Parent=CGI_10013486;
	scaffold209	TRF	Tandem_Repeat	169421	170089	839	+	.	.
scaffold209	subtractBed	intrn	178244	178291	.	+	.	Parent=CGI_10013489;
	scaffold209	TRF	Tandem_Repeat	178244	178291	96	+	.	.
scaffold209	subtractBed	intrn	181680	183725	.	-	.	Parent=CGI_10013490;
	scaffold209	TRF	Tandem_Repeat	181680	183725	2579	+	.	.
scaffold209	subtractBed	intrn	190856	191304	.	-	.	Parent=CGI_10013490;
	scaffold209	TRF	Tandem_Repeat	190856	191304	390	+	.	.
scaffold209	subtractBed	intrn	193862	193916	.	-	.	Parent=CGI_10013490;
	scaffold209	TRF	Tandem_Repeat	193862	193916	110	+	.	.
scaffold209	subtractBed	intrn	201237	202235	.	-	.	Parent=CGI_10013490;
	scaffold209	TRF	Tandem_Repeat	201237	202235	1226	+	.	.
scaffold209	subtractBed	intrn	230977	231634	.	+	.	Parent=CGI_10013492;
	scaffold209	TRF	Tandem_Repeat	230977	231634	538	+	.	.
scaffold209	subtractBed	intrn	249233	249262	.	+	.	Parent=CGI_10013492;
	scaffold209	TRF	Tandem_Repeat	249233	249262	60	+	.	.
scaffold209	subtractBed	intrn	251992	252048	.	+	.	Parent=CGI_10013492;
	scaffold209	TRF	Tandem_Repeat	251992	252048	53	+	.	.
scaffold209	subtractBed	intrn	251350	251964	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_Pao	251350	251964	516	+	.	.
scaffold209	subtractBed	intrn	250370	250819	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	250370	250819	145	+	.	.
scaffold209	subtractBed	intrn	250810	251283	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	250810	251283	149	+	.	.
scaffold209	subtractBed	intrn	251253	251363	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	251253	251363	67	+	.	.
scaffold209	subtractBed	intrn	255238	256382	.	+	.	Parent=CGI_10013492;
	scaffold209	TRF	Tandem_Repeat	255238	256382	1116	+	.	.
scaffold209	subtractBed	intrn	258297	258324	.	+	.	Parent=CGI_10013492;
	scaffold209	TRF	Tandem_Repeat	258297	258324	56	+	.	.
scaffold209	subtractBed	intrn	252893	253183	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	252893	253183	34	+	.	.
scaffold209	subtractBed	intrn	254266	254964	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	254266	254964	251	+	.	.
scaffold209	subtractBed	intrn	258658	258852	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	258658	258852	56	-	.	.
scaffold209	subtractBed	intrn	258852	259121	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	258852	259121	134	-	.	.
scaffold209	subtractBed	intrn	259313	259774	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	259313	259774	214	-	.	.
scaffold209	subtractBed	intrn	259352	259861	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	259352	259861	178	-	.	.
scaffold209	subtractBed	intrn	261392	261771	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_TcMar-Tc1	261392	261778	120	+	.	.
scaffold209	subtractBed	intrn	252999	253778	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	252999	253778	119	+	.	.
scaffold209	subtractBed	intrn	253767	254000	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	253767	254000	110	+	.	.
scaffold209	subtractBed	intrn	254000	254143	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	254000	254143	33	+	.	.
scaffold209	subtractBed	intrn	259298	259972	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	259298	259972	44	-	.	.
scaffold209	subtractBed	intrn	256723	256818	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	256723	256818	29	+	.	.
scaffold209	subtractBed	intrn	256821	256901	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	LTR_DIRS	256821	256901	48	+	.	.
scaffold209	subtractBed	intrn	258759	259085	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Charlie	258759	259085	92	-	.	.
scaffold209	subtractBed	intrn	258410	258613	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	258410	258613	40	-	.	.
scaffold209	subtractBed	intrn	258595	258627	.	+	.	Parent=CGI_10013492;
	scaffold209	WUBlastX	DNA_hAT-Tip100	258595	258627	21	-	.	.
scaffold210	subtractBed	intrn	86100	86148	.	+	.	Parent=CGI_10015882;
	scaffold210	TRF	Tandem_Repeat	86100	86148	98	+	.	.
scaffold210	subtractBed	intrn	142425	142931	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_L2	142425	142931	170	-	.	.
scaffold210	subtractBed	intrn	141330	141659	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	141330	141659	157	+	.	.
scaffold210	subtractBed	intrn	141237	141650	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	141237	141650	72	+	.	.
scaffold210	subtractBed	intrn	141794	142114	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	141794	142114	153	+	.	.
scaffold210	subtractBed	intrn	144683	146959	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_L2	144683	146959	1260	-	.	.
scaffold210	subtractBed	intrn	141360	141755	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_I	141360	141755	68	+	.	.
scaffold210	subtractBed	intrn	141722	142165	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	141722	142165	143	+	.	.
scaffold210	subtractBed	intrn	148390	148917	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	148390	148917	81	+	.	.
scaffold210	subtractBed	intrn	148291	148890	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	148291	148890	35	+	.	.
scaffold210	subtractBed	intrn	148113	148220	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	148113	148220	47	+	.	.
scaffold210	subtractBed	intrn	148390	148797	.	-	.	Parent=CGI_10015883;
	scaffold210	WUBlastX	LINE_RTE-X	148390	148797	106	+	.	.
scaffold210	subtractBed	intrn	194724	195221	.	+	.	Parent=CGI_10015887;
	scaffold210	TRF	Tandem_Repeat	194724	195221	614	+	.	.
scaffold210	subtractBed	intrn	198240	199331	.	+	.	Parent=CGI_10015887;
	scaffold210	TRF	Tandem_Repeat	198240	199331	1591	+	.	.
scaffold210	subtractBed	intrn	219841	219885	.	+	.	Parent=CGI_10015888;
	scaffold210	TRF	Tandem_Repeat	219841	219885	90	+	.	.
scaffold210	subtractBed	intrn	226235	226327	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	226235	226327	20	+	.	.
scaffold210	subtractBed	intrn	223521	223766	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	223521	223766	174	+	.	.
scaffold210	subtractBed	intrn	225226	225414	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	225226	225414	28	+	.	.
scaffold210	subtractBed	intrn	223521	224009	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	223521	224009	88	+	.	.
scaffold210	subtractBed	intrn	225375	226229	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	225375	226229	258	+	.	.
scaffold210	subtractBed	intrn	224167	224769	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	224167	224769	379	+	.	.
scaffold210	subtractBed	intrn	224170	224676	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	224170	224676	389	+	.	.
scaffold210	subtractBed	intrn	225153	225224	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	225153	225224	23	+	.	.
scaffold210	subtractBed	intrn	224681	225130	.	+	.	Parent=CGI_10015889;
	scaffold210	WUBlastX	LTR_Ngaro	224681	225130	310	+	.	.
scaffold210	subtractBed	intrn	261371	263122	.	-	.	Parent=CGI_10015891;
	scaffold210	WUBlastX	DNA_En-Spm	261371	263122	401	+	.	.
scaffold210	subtractBed	intrn	261371	263122	.	+	.	Parent=CGI_10015893;
	scaffold210	WUBlastX	DNA_En-Spm	261371	263122	401	+	.	.
scaffold210	subtractBed	intrn	358406	358870	.	+	.	Parent=CGI_10015899;
	scaffold210	WUBlastX	DNA_hAT-Ac	358406	358870	171	-	.	.
scaffold210	subtractBed	intrn	358283	358753	.	+	.	Parent=CGI_10015899;
	scaffold210	WUBlastX	DNA_hAT-Ac	358283	358753	80	-	.	.
scaffold210	subtractBed	intrn	363396	363879	.	+	.	Parent=CGI_10015899;
	scaffold210	TRF	Tandem_Repeat	363396	363879	968	+	.	.
scaffold210	subtractBed	intrn	413682	413728	.	+	.	Parent=CGI_10015905;
	scaffold210	TRF	Tandem_Repeat	413682	413728	94	+	.	.
scaffold210	subtractBed	intrn	422205	422238	.	-	.	Parent=CGI_10015906;
	scaffold210	TRF	Tandem_Repeat	422205	422238	52	+	.	.
scaffold210	subtractBed	intrn	427104	427439	.	-	.	Parent=CGI_10015907;
	scaffold210	WUBlastX	DNA_Crypton	427104	427439	104	+	.	.
scaffold210	subtractBed	intrn	427140	427637	.	-	.	Parent=CGI_10015907;
	scaffold210	WUBlastX	DNA_Crypton	427140	427637	28	+	.	.
scaffold210	subtractBed	intrn	431856	431930	.	-	.	Parent=CGI_10015907;
	scaffold210	TRF	Tandem_Repeat	431856	431930	141	+	.	.
scaffold210	subtractBed	intrn	432815	432853	.	-	.	Parent=CGI_10015907;
	scaffold210	TRF	Tandem_Repeat	432815	432853	78	+	.	.
scaffold210	subtractBed	intrn	438859	439737	.	-	.	Parent=CGI_10015907;
	scaffold210	WUBlastX	LINE_L2	438859	439737	326	-	.	.
scaffold210	subtractBed	intrn	439748	440077	.	-	.	Parent=CGI_10015907;
	scaffold210	WUBlastX	LINE_L2	439748	440077	178	-	.	.
scaffold211	subtractBed	intrn	21141	21213	.	+	.	Parent=CGI_10026932;
	scaffold211	TRF	Tandem_Repeat	21141	21213	146	+	.	.
scaffold211	subtractBed	intrn	66356	66407	.	+	.	Parent=CGI_10026933;
	scaffold211	TRF	Tandem_Repeat	66356	66407	104	+	.	.
scaffold211	subtractBed	intrn	177250	177538	.	-	.	Parent=CGI_10026936;
	scaffold211	TRF	Tandem_Repeat	177250	177538	375	+	.	.
scaffold211	subtractBed	intrn	185574	185660	.	-	.	Parent=CGI_10026936;
	scaffold211	TRF	Tandem_Repeat	185574	185660	156	+	.	.
scaffold211	subtractBed	intrn	194473	194499	.	-	.	Parent=CGI_10026936;
	scaffold211	TRF	Tandem_Repeat	194473	194499	54	+	.	.
scaffold211	subtractBed	intrn	206213	206252	.	-	.	Parent=CGI_10026936;
	scaffold211	TRF	Tandem_Repeat	206213	206252	80	+	.	.
scaffold211	subtractBed	intrn	259705	259768	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	259705	259768	53	+	.	.
scaffold211	subtractBed	intrn	262350	262389	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	262350	262389	80	+	.	.
scaffold211	subtractBed	intrn	264422	265141	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	264422	265141	531	+	.	.
scaffold211	subtractBed	intrn	264422	265141	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	264422	265141	603	+	.	.
scaffold211	subtractBed	intrn	265874	266002	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	265874	266002	249	+	.	.
scaffold211	subtractBed	intrn	268728	268763	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	268728	268763	72	+	.	.
scaffold211	subtractBed	intrn	271366	271403	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	271366	271403	76	+	.	.
scaffold211	subtractBed	intrn	273474	273899	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	273474	273899	556	+	.	.
scaffold211	subtractBed	intrn	273474	273899	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	273474	273899	558	+	.	.
scaffold211	subtractBed	intrn	273474	273800	.	-	.	Parent=CGI_10026938;
	scaffold211	TRF	Tandem_Repeat	273474	273800	530	+	.	.
scaffold211	subtractBed	intrn	271366	271403	.	+	.	Parent=CGI_10026939;
	scaffold211	TRF	Tandem_Repeat	271366	271403	76	+	.	.
scaffold211	subtractBed	intrn	273474	273899	.	+	.	Parent=CGI_10026939;
	scaffold211	TRF	Tandem_Repeat	273474	273899	556	+	.	.
scaffold211	subtractBed	intrn	273474	273899	.	+	.	Parent=CGI_10026939;
	scaffold211	TRF	Tandem_Repeat	273474	273899	558	+	.	.
scaffold211	subtractBed	intrn	273474	273800	.	+	.	Parent=CGI_10026939;
	scaffold211	TRF	Tandem_Repeat	273474	273800	530	+	.	.
scaffold211	subtractBed	intrn	425652	425927	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	425652	425927	277	+	.	.
scaffold211	subtractBed	intrn	426631	427259	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	426631	427259	907	+	.	.
scaffold211	subtractBed	intrn	425951	426409	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	425951	426409	499	+	.	.
scaffold211	subtractBed	intrn	429428	429491	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	429428	429491	56	+	.	.
scaffold211	subtractBed	intrn	429424	429495	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	429424	429495	85	+	.	.
scaffold211	subtractBed	intrn	442753	442895	.	+	.	Parent=CGI_10026946;
	scaffold211	TRF	Tandem_Repeat	442753	442895	250	+	.	.
scaffold211	subtractBed	intrn	460319	460449	.	-	.	Parent=CGI_10026948;
	scaffold211	TRF	Tandem_Repeat	460319	460449	226	+	.	.
scaffold211	subtractBed	intrn	461773	463396	.	-	.	Parent=CGI_10026948;
	scaffold211	TRF	Tandem_Repeat	461773	463396	2442	+	.	.
scaffold211	subtractBed	intrn	461773	463396	.	-	.	Parent=CGI_10026948;
	scaffold211	TRF	Tandem_Repeat	461773	463396	2450	+	.	.
scaffold211	subtractBed	intrn	461773	463396	.	-	.	Parent=CGI_10026948;
	scaffold211	TRF	Tandem_Repeat	461773	463396	2466	+	.	.
scaffold211	subtractBed	intrn	512540	512624	.	+	.	Parent=CGI_10026951;
	scaffold211	TRF	Tandem_Repeat	512540	512624	134	+	.	.
scaffold211	subtractBed	intrn	513128	513253	.	+	.	Parent=CGI_10026951;
	scaffold211	TRF	Tandem_Repeat	513128	513253	131	+	.	.
scaffold211	subtractBed	intrn	513128	513253	.	+	.	Parent=CGI_10026951;
	scaffold211	TRF	Tandem_Repeat	513128	513253	108	+	.	.
scaffold211	subtractBed	intrn	524264	524316	.	+	.	Parent=CGI_10026952;
	scaffold211	TRF	Tandem_Repeat	524264	524316	106	+	.	.
scaffold211	subtractBed	intrn	564783	564856	.	-	.	Parent=CGI_10026955;
	scaffold211	TRF	Tandem_Repeat	564783	564856	61	+	.	.
scaffold211	subtractBed	intrn	691720	691762	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	691720	691762	50	+	.	.
scaffold211	subtractBed	intrn	694026	694188	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	694026	694188	120	+	.	.
scaffold211	subtractBed	intrn	694079	694302	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	694079	694302	76	+	.	.
scaffold211	subtractBed	intrn	694052	694316	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	694052	694316	403	+	.	.
scaffold211	subtractBed	intrn	698048	698374	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	698048	698374	228	+	.	.
scaffold211	subtractBed	intrn	699409	699846	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_L1-Tx1	699409	699846	42	+	.	.
scaffold211	subtractBed	intrn	701283	701417	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_L2	701283	701417	29	+	.	.
scaffold211	subtractBed	intrn	699478	699846	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_L1-Tx1	699478	699846	143	+	.	.
scaffold211	subtractBed	intrn	698613	698894	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_CR1	698613	698894	58	-	.	.
scaffold211	subtractBed	intrn	702979	703170	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_RTE-X	702979	703170	35	+	.	.
scaffold211	subtractBed	intrn	701343	702983	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_L1-Tx1	701343	702983	615	+	.	.
scaffold211	subtractBed	intrn	703018	703929	.	+	.	Parent=CGI_10026960;
	scaffold211	WUBlastX	LINE_L1-Tx1	703018	703929	251	+	.	.
scaffold211	subtractBed	intrn	709433	709799	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	709433	709799	373	+	.	.
scaffold211	subtractBed	intrn	709435	709796	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	709435	709796	382	+	.	.
scaffold211	subtractBed	intrn	710427	710514	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	710427	710514	70	+	.	.
scaffold211	subtractBed	intrn	710440	710732	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	710440	710732	442	+	.	.
scaffold211	subtractBed	intrn	713149	713200	.	+	.	Parent=CGI_10026960;
	scaffold211	TRF	Tandem_Repeat	713149	713200	104	+	.	.
scaffold211	subtractBed	intrn	745992	746369	.	+	.	Parent=CGI_10026964;
	scaffold211	TRF	Tandem_Repeat	745943	746369	637	+	.	.
scaffold211	subtractBed	intrn	773166	773216	.	+	.	Parent=CGI_10026965;
	scaffold211	TRF	Tandem_Repeat	773166	773216	102	+	.	.
scaffold211	subtractBed	intrn	773166	773216	.	-	.	Parent=CGI_10026966;
	scaffold211	TRF	Tandem_Repeat	773166	773216	102	+	.	.
scaffold211	subtractBed	intrn	959909	960091	.	-	.	Parent=CGI_10026971;
	scaffold211	TRF	Tandem_Repeat	959909	960091	106	+	.	.
scaffold211	subtractBed	intrn	960209	960734	.	-	.	Parent=CGI_10026971;
	scaffold211	TRF	Tandem_Repeat	960209	960734	626	+	.	.
scaffold211	subtractBed	intrn	964637	964845	.	-	.	Parent=CGI_10026971;
	scaffold211	TRF	Tandem_Repeat	964637	964845	267	+	.	.
scaffold211	subtractBed	intrn	971522	971854	.	-	.	Parent=CGI_10026971;
	scaffold211	WUBlastX	LINE_CR1-L2	971522	971854	50	+	.	.
scaffold211	subtractBed	intrn	969497	971362	.	-	.	Parent=CGI_10026971;
	scaffold211	WUBlastX	LINE_CR1	969497	971362	1436	+	.	.
scaffold211	subtractBed	intrn	971516	971800	.	-	.	Parent=CGI_10026971;
	scaffold211	WUBlastX	LINE_CR1	971516	971800	180	+	.	.
scaffold211	subtractBed	intrn	969465	969518	.	-	.	Parent=CGI_10026971;
	scaffold211	WUBlastX	LINE_L2	969465	969518	21	+	.	.
scaffold211	subtractBed	intrn	979658	979696	.	+	.	Parent=CGI_10026972;
	scaffold211	TRF	Tandem_Repeat	979658	979696	69	+	.	.
scaffold211	subtractBed	intrn	983959	984287	.	+	.	Parent=CGI_10026972;
	scaffold211	TRF	Tandem_Repeat	983959	984287	493	+	.	.
scaffold211	subtractBed	intrn	986243	986457	.	+	.	Parent=CGI_10026972;
	scaffold211	TRF	Tandem_Repeat	986243	986457	215	+	.	.
scaffold211	subtractBed	intrn	987929	987977	.	+	.	Parent=CGI_10026972;
	scaffold211	TRF	Tandem_Repeat	987929	987977	98	+	.	.
scaffold211	subtractBed	intrn	986558	986971	.	+	.	Parent=CGI_10026972;
	scaffold211	WUBlastX	LINE_RTE-X	986558	986971	80	+	.	.
scaffold211	subtractBed	intrn	986558	986866	.	+	.	Parent=CGI_10026972;
	scaffold211	WUBlastX	LINE_RTE-X	986558	986866	82	+	.	.
scaffold211	subtractBed	intrn	986498	986995	.	+	.	Parent=CGI_10026972;
	scaffold211	WUBlastX	LINE_RTE-X	986498	986995	51	+	.	.
scaffold211	subtractBed	intrn	1041515	1041854	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1041515	1041854	232	+	.	.
scaffold211	subtractBed	intrn	1041515	1041853	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1041515	1041853	264	+	.	.
scaffold211	subtractBed	intrn	1041515	1041830	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1041515	1041830	269	+	.	.
scaffold211	subtractBed	intrn	1041571	1041850	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1041571	1041850	287	+	.	.
scaffold211	subtractBed	intrn	1041945	1042058	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1041945	1042058	205	+	.	.
scaffold211	subtractBed	intrn	1045165	1045270	.	-	.	Parent=CGI_10026974;
	scaffold211	TRF	Tandem_Repeat	1045165	1045270	97	+	.	.
scaffold211	subtractBed	intrn	1047662	1047690	.	+	.	Parent=CGI_10026975;
	scaffold211	TRF	Tandem_Repeat	1047662	1047690	58	+	.	.
scaffold211	subtractBed	intrn	1048875	1048945	.	+	.	Parent=CGI_10026975;
	scaffold211	TRF	Tandem_Repeat	1048875	1048945	117	+	.	.
scaffold211	subtractBed	intrn	1051855	1052291	.	+	.	Parent=CGI_10026975;
	scaffold211	TRF	Tandem_Repeat	1051855	1052291	704	+	.	.
scaffold211	subtractBed	intrn	1058369	1058400	.	+	.	Parent=CGI_10026975;
	scaffold211	TRF	Tandem_Repeat	1058369	1058400	64	+	.	.
scaffold211	subtractBed	intrn	1059918	1060134	.	+	.	Parent=CGI_10026975;
	scaffold211	TRF	Tandem_Repeat	1059918	1060134	194	+	.	.
scaffold211	subtractBed	intrn	1069866	1070299	.	-	.	Parent=CGI_10026977;
	scaffold211	TRF	Tandem_Repeat	1069866	1070299	696	+	.	.
scaffold211	subtractBed	intrn	1069866	1070299	.	-	.	Parent=CGI_10026977;
	scaffold211	TRF	Tandem_Repeat	1069866	1070299	735	+	.	.
scaffold211	subtractBed	intrn	1080103	1080446	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1080103	1080446	395	+	.	.
scaffold211	subtractBed	intrn	1089704	1090786	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1089704	1090786	1465	+	.	.
scaffold211	subtractBed	intrn	1092087	1093146	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1092087	1093146	1661	+	.	.
scaffold211	subtractBed	intrn	1093412	1093722	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1093412	1093722	297	+	.	.
scaffold211	subtractBed	intrn	1093409	1093722	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1093409	1093722	371	+	.	.
scaffold211	subtractBed	intrn	1093412	1093722	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1093412	1093722	415	+	.	.
scaffold211	subtractBed	intrn	1094024	1094101	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1094024	1094101	69	+	.	.
scaffold211	subtractBed	intrn	1095927	1095981	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1095927	1095981	110	+	.	.
scaffold211	subtractBed	intrn	1101324	1101388	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1101324	1101388	103	+	.	.
scaffold211	subtractBed	intrn	1103511	1103548	.	+	.	Parent=CGI_10026978;
	scaffold211	TRF	Tandem_Repeat	1103511	1103548	76	+	.	.
scaffold211	subtractBed	intrn	1089704	1090786	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1089704	1090786	1465	+	.	.
scaffold211	subtractBed	intrn	1092087	1093146	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1092087	1093146	1661	+	.	.
scaffold211	subtractBed	intrn	1093412	1093722	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1093412	1093722	297	+	.	.
scaffold211	subtractBed	intrn	1093409	1093722	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1093409	1093722	371	+	.	.
scaffold211	subtractBed	intrn	1093412	1093722	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1093412	1093722	415	+	.	.
scaffold211	subtractBed	intrn	1094024	1094101	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1094024	1094101	69	+	.	.
scaffold211	subtractBed	intrn	1095927	1095981	.	-	.	Parent=CGI_10026979;
	scaffold211	TRF	Tandem_Repeat	1095927	1095981	110	+	.	.
scaffold211	subtractBed	intrn	1101324	1101388	.	-	.	Parent=CGI_10026980;
	scaffold211	TRF	Tandem_Repeat	1101324	1101388	103	+	.	.
scaffold211	subtractBed	intrn	1103511	1103548	.	-	.	Parent=CGI_10026980;
	scaffold211	TRF	Tandem_Repeat	1103511	1103548	76	+	.	.
scaffold211	subtractBed	intrn	1120170	1120334	.	+	.	Parent=CGI_10026981;
	scaffold211	TRF	Tandem_Repeat	1120170	1120334	321	+	.	.
scaffold211	subtractBed	intrn	1135156	1135194	.	+	.	Parent=CGI_10026982;
	scaffold211	TRF	Tandem_Repeat	1135156	1135194	78	+	.	.
scaffold211	subtractBed	intrn	1163903	1163934	.	-	.	Parent=CGI_10026985;
	scaffold211	TRF	Tandem_Repeat	1163903	1163934	64	+	.	.
scaffold211	subtractBed	intrn	1172709	1172738	.	-	.	Parent=CGI_10026986;
	scaffold211	TRF	Tandem_Repeat	1172709	1172738	60	+	.	.
scaffold211	subtractBed	intrn	1216892	1217492	.	-	.	Parent=CGI_10026991;
	scaffold211	TRF	Tandem_Repeat	1216892	1217492	698	+	.	.
scaffold211	subtractBed	intrn	1218131	1219170	.	-	.	Parent=CGI_10026991;
	scaffold211	TRF	Tandem_Repeat	1218131	1219170	1413	+	.	.
scaffold211	subtractBed	intrn	1227999	1228072	.	+	.	Parent=CGI_10026992;
	scaffold211	TRF	Tandem_Repeat	1227999	1228072	76	+	.	.
scaffold211	subtractBed	intrn	1228023	1228106	.	+	.	Parent=CGI_10026992;
	scaffold211	TRF	Tandem_Repeat	1228023	1228106	80	+	.	.
scaffold211	subtractBed	intrn	1274697	1275065	.	-	.	Parent=CGI_10026994;
	scaffold211	WUBlastX	DNA_Sola	1274697	1275065	83	+	.	.
scaffold213	subtractBed	intrn	8305	8542	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	8305	8560	311	+	.	.
scaffold213	subtractBed	intrn	16986	17010	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	16986	17010	50	+	.	.
scaffold213	subtractBed	intrn	19552	19596	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	19552	19596	90	+	.	.
scaffold213	subtractBed	intrn	20628	20713	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	20628	20713	172	+	.	.
scaffold213	subtractBed	intrn	21551	21840	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	21551	21840	159	+	.	.
scaffold213	subtractBed	intrn	21667	21832	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	21667	21832	273	+	.	.
scaffold213	subtractBed	intrn	21653	21846	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	21653	21846	78	+	.	.
scaffold213	subtractBed	intrn	23277	23407	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	23277	23407	88	+	.	.
scaffold213	subtractBed	intrn	23212	23382	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	23212	23382	127	+	.	.
scaffold213	subtractBed	intrn	24597	24846	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	24597	24846	369	+	.	.
scaffold213	subtractBed	intrn	32065	32101	.	-	.	Parent=CGI_10007550;
	scaffold213	TRF	Tandem_Repeat	32065	32101	65	+	.	.
scaffold213	subtractBed	intrn	44965	46059	.	+	.	Parent=CGI_10007551;
	scaffold213	TRF	Tandem_Repeat	44965	46059	1530	+	.	.
scaffold213	subtractBed	intrn	46264	46308	.	+	.	Parent=CGI_10007551;
	scaffold213	TRF	Tandem_Repeat	46264	46308	72	+	.	.
scaffold213	subtractBed	intrn	53023	53089	.	+	.	Parent=CGI_10007551;
	scaffold213	TRF	Tandem_Repeat	53023	53089	134	+	.	.
scaffold213	subtractBed	intrn	56631	56688	.	+	.	Parent=CGI_10007551;
	scaffold213	TRF	Tandem_Repeat	56631	56688	91	+	.	.
scaffold213	subtractBed	intrn	59234	59274	.	+	.	Parent=CGI_10007551;
	scaffold213	TRF	Tandem_Repeat	59234	59274	82	+	.	.
scaffold213	subtractBed	intrn	168001	168036	.	-	.	Parent=CGI_10007552;
	scaffold213	TRF	Tandem_Repeat	168001	168036	54	+	.	.
scaffold213	subtractBed	intrn	174318	174628	.	-	.	Parent=CGI_10007552;
	scaffold213	TRF	Tandem_Repeat	174318	174628	209	+	.	.
scaffold213	subtractBed	intrn	175921	176052	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_TcMar-Tc1	175921	176052	80	-	.	.
scaffold213	subtractBed	intrn	176097	176726	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_TcMar-Tc1	176097	176726	222	-	.	.
scaffold213	subtractBed	intrn	172887	173165	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	172887	173165	119	-	.	.
scaffold213	subtractBed	intrn	171846	172484	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	171846	172484	100	-	.	.
scaffold213	subtractBed	intrn	169221	169460	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_hAT-Tip100	169221	169460	152	+	.	.
scaffold213	subtractBed	intrn	169465	169827	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_hAT-Tip100	169465	169827	162	+	.	.
scaffold213	subtractBed	intrn	169866	170030	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_hAT-Tip100	169866	170030	87	+	.	.
scaffold213	subtractBed	intrn	170041	170355	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	170041	170355	133	-	.	.
scaffold213	subtractBed	intrn	170357	170542	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	170357	170542	158	-	.	.
scaffold213	subtractBed	intrn	170565	170981	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	170565	170981	326	-	.	.
scaffold213	subtractBed	intrn	170998	171831	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	170998	171831	614	-	.	.
scaffold213	subtractBed	intrn	172213	172881	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	172213	172881	91	-	.	.
scaffold213	subtractBed	intrn	171846	172214	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_Maverick	171846	172214	189	-	.	.
scaffold213	subtractBed	intrn	176046	176096	.	-	.	Parent=CGI_10007552;
	scaffold213	WUBlastX	DNA_TcMar-Tc1	176046	176096	48	-	.	.
scaffold215	subtractBed	intrn	79347	79434	.	-	.	Parent=CGI_10006639;
	scaffold215	TRF	Tandem_Repeat	79347	79434	126	+	.	.
scaffold215	subtractBed	intrn	91685	91756	.	-	.	Parent=CGI_10006640;
	scaffold215	TRF	Tandem_Repeat	91685	91756	117	+	.	.
scaffold215	subtractBed	intrn	109969	110006	.	+	.	Parent=CGI_10006643;
	scaffold215	TRF	Tandem_Repeat	109969	110006	76	+	.	.
scaffold215	subtractBed	intrn	109824	109844	.	+	.	Parent=CGI_10006643;
	scaffold215	WUBlastX	DNA_Maverick	109434	109844	59	+	.	.
scaffold215	subtractBed	intrn	144165	144222	.	+	.	Parent=CGI_10006646;
	scaffold215	TRF	Tandem_Repeat	144165	144222	116	+	.	.
scaffold215	subtractBed	intrn	145504	145572	.	+	.	Parent=CGI_10006646;
	scaffold215	TRF	Tandem_Repeat	145504	145572	138	+	.	.
scaffold215	subtractBed	intrn	145626	145661	.	+	.	Parent=CGI_10006646;
	scaffold215	TRF	Tandem_Repeat	145626	145661	63	+	.	.
scaffold215	subtractBed	intrn	146651	146794	.	+	.	Parent=CGI_10006646;
	scaffold215	WUBlastX	LINE_RTE-X	146651	146794	30	-	.	.
scaffold215	subtractBed	intrn	151193	151251	.	-	.	Parent=CGI_10006647;
	scaffold215	TRF	Tandem_Repeat	151193	151251	64	+	.	.
scaffold215	subtractBed	intrn	152592	152630	.	-	.	Parent=CGI_10006647;
	scaffold215	TRF	Tandem_Repeat	152592	152630	78	+	.	.
scaffold215	subtractBed	intrn	153400	153496	.	-	.	Parent=CGI_10006647;
	scaffold215	TRF	Tandem_Repeat	153400	153496	171	+	.	.
scaffold215	subtractBed	intrn	156686	156731	.	-	.	Parent=CGI_10006647;
	scaffold215	TRF	Tandem_Repeat	156686	156731	58	+	.	.
scaffold215	subtractBed	intrn	156729	156778	.	-	.	Parent=CGI_10006647;
	scaffold215	TRF	Tandem_Repeat	156729	156778	100	+	.	.
scaffold215	subtractBed	intrn	156390	156479	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	156390	156479	87	-	.	.
scaffold215	subtractBed	intrn	155968	156450	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	155968	156450	178	-	.	.
scaffold215	subtractBed	intrn	155436	155600	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	155436	155600	29	-	.	.
scaffold215	subtractBed	intrn	155549	155965	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	155549	155965	206	-	.	.
scaffold215	subtractBed	intrn	156121	156411	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	156121	156411	234	-	.	.
scaffold215	subtractBed	intrn	156479	156604	.	-	.	Parent=CGI_10006647;
	scaffold215	WUBlastX	LINE_RTE-BovB	156479	156604	128	-	.	.
scaffold218	subtractBed	intrn	5854	5882	.	+	.	Parent=CGI_10007758;
	scaffold218	TRF	Tandem_Repeat	5854	5882	58	+	.	.
scaffold218	subtractBed	intrn	5916	5970	.	+	.	Parent=CGI_10007758;
	scaffold218	TRF	Tandem_Repeat	5916	5970	110	+	.	.
scaffold218	subtractBed	intrn	39668	39702	.	-	.	Parent=CGI_10007761;
	scaffold218	TRF	Tandem_Repeat	39668	39702	52	+	.	.
scaffold218	subtractBed	intrn	86859	86901	.	+	.	Parent=CGI_10007762;
	scaffold218	TRF	Tandem_Repeat	86859	86901	86	+	.	.
scaffold218	subtractBed	intrn	108950	109002	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	108950	109002	70	+	.	.
scaffold218	subtractBed	intrn	108950	109002	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	108950	109002	70	+	.	.
scaffold218	subtractBed	intrn	127022	127366	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	127022	127366	384	+	.	.
scaffold218	subtractBed	intrn	127020	127366	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	127020	127366	464	+	.	.
scaffold218	subtractBed	intrn	127022	127366	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	127022	127366	384	+	.	.
scaffold218	subtractBed	intrn	128011	128398	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	128011	128398	488	+	.	.
scaffold218	subtractBed	intrn	128011	128398	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	128011	128398	488	+	.	.
scaffold218	subtractBed	intrn	128011	128398	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	128011	128398	488	+	.	.
scaffold218	subtractBed	intrn	131244	131473	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	131244	131473	262	+	.	.
scaffold218	subtractBed	intrn	131346	131446	.	-	.	Parent=CGI_10007764;
	scaffold218	TRF	Tandem_Repeat	131346	131446	66	+	.	.
scaffold218	subtractBed	intrn	108950	109002	.	+	.	Parent=CGI_10007765;
	scaffold218	TRF	Tandem_Repeat	108950	109002	70	+	.	.
scaffold218	subtractBed	intrn	108950	109002	.	+	.	Parent=CGI_10007765;
	scaffold218	TRF	Tandem_Repeat	108950	109002	70	+	.	.
scaffold219	subtractBed	intrn	129332	129646	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	129332	129646	161	+	.	.
scaffold219	subtractBed	intrn	129338	130081	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	129338	130081	95	+	.	.
scaffold219	subtractBed	intrn	129251	129643	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	129251	129643	77	+	.	.
scaffold219	subtractBed	intrn	132108	132377	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	132108	132377	119	+	.	.
scaffold219	subtractBed	intrn	132440	132853	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	132440	132853	30	+	.	.
scaffold219	subtractBed	intrn	131870	131938	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1	131870	131938	26	+	.	.
scaffold219	subtractBed	intrn	132111	132458	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	132111	132458	72	+	.	.
scaffold219	subtractBed	intrn	131962	132126	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1	131962	132126	28	+	.	.
scaffold219	subtractBed	intrn	132001	132138	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	132001	132138	37	+	.	.
scaffold219	subtractBed	intrn	130093	131172	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_L1-Tx1	130093	131172	310	+	.	.
scaffold219	subtractBed	intrn	130651	131295	.	-	.	Parent=CGI_10016614;
	scaffold219	WUBlastX	LINE_R2	130651	131295	88	+	.	.
scaffold219	subtractBed	intrn	177875	177918	.	+	.	Parent=CGI_10016618;
	scaffold219	TRF	Tandem_Repeat	177875	177918	52	+	.	.
scaffold219	subtractBed	intrn	204367	204410	.	+	.	Parent=CGI_10016618;
	scaffold219	TRF	Tandem_Repeat	204367	204410	70	+	.	.
scaffold219	subtractBed	intrn	204380	204413	.	+	.	Parent=CGI_10016618;
	scaffold219	TRF	Tandem_Repeat	204380	204413	50	+	.	.
scaffold219	subtractBed	intrn	208766	209591	.	+	.	Parent=CGI_10016618;
	scaffold219	TRF	Tandem_Repeat	208766	209591	1119	+	.	.
scaffold219	subtractBed	intrn	212530	214254	.	+	.	Parent=CGI_10016618;
	scaffold219	TRF	Tandem_Repeat	212530	214254	2035	+	.	.
scaffold219	subtractBed	intrn	221187	221254	.	-	.	Parent=CGI_10016619;
	scaffold219	TRF	Tandem_Repeat	221187	221254	91	+	.	.
scaffold219	subtractBed	intrn	226830	228486	.	+	.	Parent=CGI_10016620;
	scaffold219	TRF	Tandem_Repeat	226830	228486	1669	+	.	.
scaffold219	subtractBed	intrn	251545	252227	.	+	.	Parent=CGI_10016622;
	scaffold219	TRF	Tandem_Repeat	251545	252227	956	+	.	.
scaffold219	subtractBed	intrn	259588	259822	.	-	.	Parent=CGI_10016623;
	scaffold219	TRF	Tandem_Repeat	259588	259822	328	+	.	.
scaffold219	subtractBed	intrn	291701	291937	.	-	.	Parent=CGI_10016628;
	scaffold219	WUBlastX	LINE_RTE-X	291701	291937	68	+	.	.
scaffold219	subtractBed	intrn	307489	308583	.	+	.	Parent=CGI_10016630;
	scaffold219	TRF	Tandem_Repeat	307489	308621	1648	+	.	.
scaffold219	subtractBed	intrn	331188	331224	.	-	.	Parent=CGI_10016631;
	scaffold219	TRF	Tandem_Repeat	331188	331224	74	+	.	.
scaffold219	subtractBed	intrn	371266	371322	.	+	.	Parent=CGI_10016632;
	scaffold219	TRF	Tandem_Repeat	371266	371322	114	+	.	.
scaffold219	subtractBed	intrn	388204	388256	.	+	.	Parent=CGI_10016633;
	scaffold219	TRF	Tandem_Repeat	388204	388256	106	+	.	.
scaffold22	subtractBed	intrn	13376	13437	.	+	.	Parent=CGI_10028822;
	scaffold22	TRF	Tandem_Repeat	13376	13437	52	+	.	.
scaffold22	subtractBed	intrn	13373	13436	.	+	.	Parent=CGI_10028822;
	scaffold22	TRF	Tandem_Repeat	13373	13436	50	+	.	.
scaffold22	subtractBed	intrn	13373	13442	.	+	.	Parent=CGI_10028822;
	scaffold22	TRF	Tandem_Repeat	13373	13442	63	+	.	.
scaffold22	subtractBed	intrn	13373	13442	.	+	.	Parent=CGI_10028822;
	scaffold22	TRF	Tandem_Repeat	13373	13442	72	+	.	.
scaffold22	subtractBed	intrn	33043	33067	.	+	.	Parent=CGI_10028824;
	scaffold22	TRF	Tandem_Repeat	33043	33067	50	+	.	.
scaffold22	subtractBed	intrn	71576	71625	.	-	.	Parent=CGI_10028825;
	scaffold22	TRF	Tandem_Repeat	71576	71625	100	+	.	.
scaffold22	subtractBed	intrn	73016	73069	.	-	.	Parent=CGI_10028825;
	scaffold22	TRF	Tandem_Repeat	73016	73069	108	+	.	.
scaffold22	subtractBed	intrn	90386	90583	.	-	.	Parent=CGI_10028828;
	scaffold22	WUBlastX	DNA_TcMar-Marin	90386	90583	63	+	.	.
scaffold22	subtractBed	intrn	90329	90520	.	-	.	Parent=CGI_10028828;
	scaffold22	WUBlastX	DNA_TcMar-Marin	90329	90520	51	+	.	.
scaffold22	subtractBed	intrn	90897	90992	.	-	.	Parent=CGI_10028828;
	scaffold22	WUBlastX	DNA_TcMar-Marin	90897	90992	27	+	.	.
scaffold22	subtractBed	intrn	90567	90803	.	-	.	Parent=CGI_10028828;
	scaffold22	WUBlastX	DNA_TcMar-Marin	90567	90803	69	+	.	.
scaffold22	subtractBed	intrn	90834	90995	.	-	.	Parent=CGI_10028828;
	scaffold22	WUBlastX	DNA_TcMar-Marin	90834	90995	21	+	.	.
scaffold22	subtractBed	intrn	105518	105692	.	-	.	Parent=CGI_10028828;
	scaffold22	TRF	Tandem_Repeat	105518	105692	98	+	.	.
scaffold22	subtractBed	intrn	106781	106990	.	-	.	Parent=CGI_10028828;
	scaffold22	TRF	Tandem_Repeat	106781	106990	161	+	.	.
scaffold22	subtractBed	intrn	106785	106993	.	-	.	Parent=CGI_10028828;
	scaffold22	TRF	Tandem_Repeat	106785	106993	188	+	.	.
scaffold22	subtractBed	intrn	136184	136429	.	-	.	Parent=CGI_10028830;
	scaffold22	TRF	Tandem_Repeat	136184	136429	156	+	.	.
scaffold22	subtractBed	intrn	139884	140069	.	-	.	Parent=CGI_10028830;
	scaffold22	TRF	Tandem_Repeat	139884	140069	264	+	.	.
scaffold22	subtractBed	intrn	140070	140395	.	-	.	Parent=CGI_10028830;
	scaffold22	TRF	Tandem_Repeat	140070	140395	575	+	.	.
scaffold22	subtractBed	intrn	148300	148342	.	-	.	Parent=CGI_10028830;
	scaffold22	TRF	Tandem_Repeat	148300	148342	59	+	.	.
scaffold22	subtractBed	intrn	151312	151357	.	-	.	Parent=CGI_10028830;
	scaffold22	TRF	Tandem_Repeat	151312	151357	67	+	.	.
scaffold22	subtractBed	intrn	163425	163501	.	+	.	Parent=CGI_10028831;
	scaffold22	TRF	Tandem_Repeat	163425	163501	88	+	.	.
scaffold22	subtractBed	intrn	163424	163497	.	+	.	Parent=CGI_10028831;
	scaffold22	TRF	Tandem_Repeat	163424	163497	93	+	.	.
scaffold22	subtractBed	intrn	163424	163498	.	+	.	Parent=CGI_10028831;
	scaffold22	TRF	Tandem_Repeat	163424	163498	70	+	.	.
scaffold22	subtractBed	intrn	166105	166160	.	+	.	Parent=CGI_10028831;
	scaffold22	TRF	Tandem_Repeat	166105	166160	51	+	.	.
scaffold22	subtractBed	intrn	168185	169081	.	+	.	Parent=CGI_10028831;
	scaffold22	WUBlastX	DNA_Merlin	168185	169081	353	+	.	.
scaffold22	subtractBed	intrn	171801	171825	.	+	.	Parent=CGI_10028831;
	scaffold22	TRF	Tandem_Repeat	171801	171825	50	+	.	.
scaffold22	subtractBed	intrn	187062	187349	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	187062	187349	531	+	.	.
scaffold22	subtractBed	intrn	187887	188005	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	187887	188005	78	+	.	.
scaffold22	subtractBed	intrn	190339	190419	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	190339	190419	110	+	.	.
scaffold22	subtractBed	intrn	190961	191101	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	190961	191101	120	+	.	.
scaffold22	subtractBed	intrn	192089	192201	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	192089	192201	75	+	.	.
scaffold22	subtractBed	intrn	192609	192729	.	-	.	Parent=CGI_10028832;
	scaffold22	TRF	Tandem_Repeat	192609	192729	217	+	.	.
scaffold22	subtractBed	intrn	198790	199574	.	+	.	Parent=CGI_10028834;
	scaffold22	TRF	Tandem_Repeat	198790	199574	1150	+	.	.
scaffold22	subtractBed	intrn	198790	199574	.	+	.	Parent=CGI_10028834;
	scaffold22	TRF	Tandem_Repeat	198790	199574	1245	+	.	.
scaffold22	subtractBed	intrn	199566	199604	.	+	.	Parent=CGI_10028834;
	scaffold22	TRF	Tandem_Repeat	199566	199604	78	+	.	.
scaffold22	subtractBed	intrn	199594	199819	.	+	.	Parent=CGI_10028834;
	scaffold22	TRF	Tandem_Repeat	199594	199819	229	+	.	.
scaffold22	subtractBed	intrn	208359	208402	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	208359	208402	61	+	.	.
scaffold22	subtractBed	intrn	208360	208398	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	208360	208398	51	+	.	.
scaffold22	subtractBed	intrn	208410	209066	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	208410	209066	889	+	.	.
scaffold22	subtractBed	intrn	211241	211505	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	211241	211505	449	+	.	.
scaffold22	subtractBed	intrn	211356	211482	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	211356	211482	64	+	.	.
scaffold22	subtractBed	intrn	211380	211504	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	211380	211504	56	+	.	.
scaffold22	subtractBed	intrn	213213	213710	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	213213	213710	978	+	.	.
scaffold22	subtractBed	intrn	216481	216507	.	+	.	Parent=CGI_10028835;
	scaffold22	TRF	Tandem_Repeat	216481	216507	54	+	.	.
scaffold22	subtractBed	intrn	219499	219737	.	-	.	Parent=CGI_10028836;
	scaffold22	TRF	Tandem_Repeat	219499	219737	253	+	.	.
scaffold22	subtractBed	intrn	255485	255593	.	-	.	Parent=CGI_10028837;
	scaffold22	TRF	Tandem_Repeat	255485	255593	175	+	.	.
scaffold22	subtractBed	intrn	271306	272304	.	-	.	Parent=CGI_10028838;
	scaffold22	WUBlastX	LINE_L1-Tx1	271306	272304	179	+	.	.
scaffold22	subtractBed	intrn	302305	302351	.	+	.	Parent=CGI_10028840;
	scaffold22	TRF	Tandem_Repeat	302305	302351	85	+	.	.
scaffold22	subtractBed	intrn	329042	329075	.	-	.	Parent=CGI_10028843;
	scaffold22	TRF	Tandem_Repeat	329042	329075	68	+	.	.
scaffold22	subtractBed	intrn	339494	339623	.	-	.	Parent=CGI_10028844;
	scaffold22	TRF	Tandem_Repeat	339494	339623	84	+	.	.
scaffold22	subtractBed	intrn	339539	339685	.	-	.	Parent=CGI_10028844;
	scaffold22	TRF	Tandem_Repeat	339539	339685	64	+	.	.
scaffold22	subtractBed	intrn	356233	356297	.	+	.	Parent=CGI_10028845;
	scaffold22	TRF	Tandem_Repeat	356233	356297	74	+	.	.
scaffold22	subtractBed	intrn	370375	370464	.	+	.	Parent=CGI_10028847;
	scaffold22	TRF	Tandem_Repeat	370375	370464	58	+	.	.
scaffold22	subtractBed	intrn	387530	387701	.	+	.	Parent=CGI_10028849;
	scaffold22	TRF	Tandem_Repeat	387530	387705	275	+	.	.
scaffold22	subtractBed	intrn	402269	403064	.	+	.	Parent=CGI_10028849;
	scaffold22	TRF	Tandem_Repeat	402269	403064	1001	+	.	.
scaffold22	subtractBed	intrn	404127	404154	.	+	.	Parent=CGI_10028849;
	scaffold22	TRF	Tandem_Repeat	404127	404154	56	+	.	.
scaffold22	subtractBed	intrn	404458	404506	.	+	.	Parent=CGI_10028849;
	scaffold22	TRF	Tandem_Repeat	404458	404506	98	+	.	.
scaffold22	subtractBed	intrn	452548	452585	.	-	.	Parent=CGI_10028854;
	scaffold22	TRF	Tandem_Repeat	452548	452585	76	+	.	.
scaffold22	subtractBed	intrn	492351	492675	.	+	.	Parent=CGI_10028857;
	scaffold22	TRF	Tandem_Repeat	492351	492675	321	+	.	.
scaffold22	subtractBed	intrn	507168	507214	.	+	.	Parent=CGI_10028857;
	scaffold22	TRF	Tandem_Repeat	507168	507214	76	+	.	.
scaffold22	subtractBed	intrn	507375	507399	.	+	.	Parent=CGI_10028857;
	scaffold22	TRF	Tandem_Repeat	507375	507399	50	+	.	.
scaffold22	subtractBed	intrn	657452	657482	.	-	.	Parent=CGI_10028868;
	scaffold22	TRF	Tandem_Repeat	657452	657482	62	+	.	.
scaffold22	subtractBed	intrn	727908	727944	.	-	.	Parent=CGI_10028871;
	scaffold22	TRF	Tandem_Repeat	727908	727944	56	+	.	.
scaffold22	subtractBed	intrn	771267	771306	.	+	.	Parent=CGI_10028874;
	scaffold22	TRF	Tandem_Repeat	771267	771306	80	+	.	.
scaffold22	subtractBed	intrn	849127	849175	.	-	.	Parent=CGI_10028879;
	scaffold22	TRF	Tandem_Repeat	849127	849175	98	+	.	.
scaffold22	subtractBed	intrn	860244	860282	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	860244	860282	51	+	.	.
scaffold22	subtractBed	intrn	861240	861279	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	861240	861279	53	+	.	.
scaffold22	subtractBed	intrn	864849	865895	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	864849	865895	1001	+	.	.
scaffold22	subtractBed	intrn	866413	867210	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	866413	867210	1109	+	.	.
scaffold22	subtractBed	intrn	866413	867210	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	866413	867210	1069	+	.	.
scaffold22	subtractBed	intrn	871484	871526	.	+	.	Parent=CGI_10028880;
	scaffold22	TRF	Tandem_Repeat	871484	871526	59	+	.	.
scaffold22	subtractBed	intrn	882347	883090	.	+	.	Parent=CGI_10028880;
	scaffold22	WUBlastX	LINE_RTE-X	882347	883090	183	-	.	.
scaffold22	subtractBed	intrn	882221	883114	.	+	.	Parent=CGI_10028880;
	scaffold22	WUBlastX	LINE_RTE-X	882221	883114	106	-	.	.
scaffold22	subtractBed	intrn	897800	897837	.	-	.	Parent=CGI_10028882;
	scaffold22	TRF	Tandem_Repeat	897800	897837	60	+	.	.
scaffold22	subtractBed	intrn	905361	906230	.	-	.	Parent=CGI_10028882;
	scaffold22	TRF	Tandem_Repeat	905361	906230	1210	+	.	.
scaffold22	subtractBed	intrn	907182	907328	.	-	.	Parent=CGI_10028882;
	scaffold22	TRF	Tandem_Repeat	907182	907328	73	+	.	.
scaffold22	subtractBed	intrn	907244	907373	.	-	.	Parent=CGI_10028882;
	scaffold22	TRF	Tandem_Repeat	907244	907373	93	+	.	.
scaffold22	subtractBed	intrn	911763	912063	.	-	.	Parent=CGI_10028882;
	scaffold22	TRF	Tandem_Repeat	911763	912063	401	+	.	.
scaffold22	subtractBed	intrn	905361	906230	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	905361	906230	1210	+	.	.
scaffold22	subtractBed	intrn	907182	907328	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	907182	907328	73	+	.	.
scaffold22	subtractBed	intrn	907244	907373	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	907244	907373	93	+	.	.
scaffold22	subtractBed	intrn	911763	912063	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	911763	912063	401	+	.	.
scaffold22	subtractBed	intrn	916446	916836	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	916446	916836	522	+	.	.
scaffold22	subtractBed	intrn	916444	916829	.	+	.	Parent=CGI_10028883;
	scaffold22	TRF	Tandem_Repeat	916444	916829	582	+	.	.
scaffold22	subtractBed	intrn	931880	933208	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	931880	933208	1266	-	.	.
scaffold22	subtractBed	intrn	933494	933874	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	933494	933874	152	-	.	.
scaffold22	subtractBed	intrn	930589	931887	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	930589	931887	1104	-	.	.
scaffold22	subtractBed	intrn	933213	933512	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	933213	933512	292	-	.	.
scaffold22	subtractBed	intrn	935126	935317	.	-	.	Parent=CGI_10028884;
	scaffold22	TRF	Tandem_Repeat	935126	935317	79	+	.	.
scaffold22	subtractBed	intrn	935125	935318	.	-	.	Parent=CGI_10028884;
	scaffold22	TRF	Tandem_Repeat	935125	935318	160	+	.	.
scaffold22	subtractBed	intrn	934158	934478	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	934158	934478	31	-	.	.
scaffold22	subtractBed	intrn	934583	934807	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	934583	934807	53	-	.	.
scaffold22	subtractBed	intrn	934730	935083	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	934730	935083	98	-	.	.
scaffold22	subtractBed	intrn	935536	935907	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	935536	935907	229	-	.	.
scaffold22	subtractBed	intrn	935539	936081	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	935539	936081	27	-	.	.
scaffold22	subtractBed	intrn	933888	934400	.	-	.	Parent=CGI_10028884;
	scaffold22	WUBlastX	LTR_Gypsy	933888	934400	280	-	.	.
scaffold22	subtractBed	intrn	1007568	1007618	.	-	.	Parent=CGI_10028889;
	scaffold22	TRF	Tandem_Repeat	1007568	1007618	102	+	.	.
scaffold22	subtractBed	intrn	1069415	1069842	.	+	.	Parent=CGI_10028894;
	scaffold22	TRF	Tandem_Repeat	1069415	1069842	348	+	.	.
scaffold22	subtractBed	intrn	1069407	1069842	.	+	.	Parent=CGI_10028894;
	scaffold22	TRF	Tandem_Repeat	1069407	1069842	421	+	.	.
scaffold22	subtractBed	intrn	1069407	1069842	.	+	.	Parent=CGI_10028894;
	scaffold22	TRF	Tandem_Repeat	1069407	1069842	430	+	.	.
scaffold22	subtractBed	intrn	1070044	1070137	.	+	.	Parent=CGI_10028894;
	scaffold22	TRF	Tandem_Repeat	1070044	1070137	147	+	.	.
scaffold22	subtractBed	intrn	1077787	1077838	.	+	.	Parent=CGI_10028895;
	scaffold22	TRF	Tandem_Repeat	1077787	1077838	63	+	.	.
scaffold22	subtractBed	intrn	1073448	1073597	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073448	1073597	51	+	.	.
scaffold22	subtractBed	intrn	1073807	1073998	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073807	1073998	154	+	.	.
scaffold22	subtractBed	intrn	1074783	1074995	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074783	1074995	83	+	.	.
scaffold22	subtractBed	intrn	1074443	1074496	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074443	1074496	25	+	.	.
scaffold22	subtractBed	intrn	1072791	1073057	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1072791	1073057	69	+	.	.
scaffold22	subtractBed	intrn	1073780	1074010	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073780	1074010	121	+	.	.
scaffold22	subtractBed	intrn	1074457	1074633	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074457	1074633	73	+	.	.
scaffold22	subtractBed	intrn	1074950	1075342	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074950	1075342	216	+	.	.
scaffold22	subtractBed	intrn	1073554	1073694	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073554	1073694	45	+	.	.
scaffold22	subtractBed	intrn	1072854	1073057	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1072854	1073057	69	+	.	.
scaffold22	subtractBed	intrn	1074147	1074419	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074147	1074419	51	+	.	.
scaffold22	subtractBed	intrn	1073172	1073321	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073172	1073321	78	+	.	.
scaffold22	subtractBed	intrn	1073744	1073971	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073744	1073971	76	+	.	.
scaffold22	subtractBed	intrn	1074675	1074995	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074675	1074995	52	+	.	.
scaffold22	subtractBed	intrn	1073439	1073567	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073439	1073567	64	+	.	.
scaffold22	subtractBed	intrn	1074496	1074633	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074496	1074633	81	+	.	.
scaffold22	subtractBed	intrn	1073340	1073468	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1073340	1073468	41	+	.	.
scaffold22	subtractBed	intrn	1074866	1075303	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LTR_Pao	1074866	1075303	113	+	.	.
scaffold22	subtractBed	intrn	1076206	1076580	.	+	.	Parent=CGI_10028895;
	scaffold22	WUBlastX	LINE_Penelope	1076206	1076580	23	+	.	.
scaffold22	subtractBed	intrn	1082672	1082926	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L1-Tx1	1082672	1082926	88	+	.	.
scaffold22	subtractBed	intrn	1083911	1084951	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L2	1083911	1084951	565	+	.	.
scaffold22	subtractBed	intrn	1082672	1082869	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L1-Tx1	1082672	1082869	103	+	.	.
scaffold22	subtractBed	intrn	1082330	1083010	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L1-Tx1	1082330	1083010	79	+	.	.
scaffold22	subtractBed	intrn	1085013	1085276	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L2	1085013	1085276	135	+	.	.
scaffold22	subtractBed	intrn	1083737	1085011	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L2	1083737	1085011	487	+	.	.
scaffold22	subtractBed	intrn	1081990	1082523	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L1-Tx1	1081990	1082523	121	+	.	.
scaffold22	subtractBed	intrn	1082950	1083744	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L1-Tx1	1082950	1083744	115	+	.	.
scaffold22	subtractBed	intrn	1085079	1085324	.	-	.	Parent=CGI_10028896;
	scaffold22	WUBlastX	LINE_L2	1085079	1085324	34	+	.	.
scaffold22	subtractBed	intrn	1124205	1124260	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1124205	1124260	112	+	.	.
scaffold22	subtractBed	intrn	1130210	1130290	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1130210	1130290	62	+	.	.
scaffold22	subtractBed	intrn	1132657	1132712	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1132657	1132712	112	+	.	.
scaffold22	subtractBed	intrn	1136434	1136460	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1136434	1136460	54	+	.	.
scaffold22	subtractBed	intrn	1136546	1136634	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1136546	1136634	65	+	.	.
scaffold22	subtractBed	intrn	1136546	1136614	.	+	.	Parent=CGI_10028898;
	scaffold22	TRF	Tandem_Repeat	1136546	1136614	97	+	.	.
scaffold22	subtractBed	intrn	1177428	1177668	.	-	.	Parent=CGI_10028900;
	scaffold22	TRF	Tandem_Repeat	1177428	1177668	113	+	.	.
scaffold22	subtractBed	intrn	1177934	1178152	.	-	.	Parent=CGI_10028900;
	scaffold22	TRF	Tandem_Repeat	1177934	1178152	172	+	.	.
scaffold22	subtractBed	intrn	1186591	1186620	.	-	.	Parent=CGI_10028900;
	scaffold22	TRF	Tandem_Repeat	1186591	1186620	60	+	.	.
scaffold22	subtractBed	intrn	1192185	1192379	.	-	.	Parent=CGI_10028900;
	scaffold22	TRF	Tandem_Repeat	1192185	1192415	453	+	.	.
scaffold22	subtractBed	intrn	1202023	1202059	.	+	.	Parent=CGI_10028901;
	scaffold22	TRF	Tandem_Repeat	1202023	1202059	74	+	.	.
scaffold22	subtractBed	intrn	1220708	1220755	.	+	.	Parent=CGI_10028902;
	scaffold22	TRF	Tandem_Repeat	1220708	1220755	96	+	.	.
scaffold22	subtractBed	intrn	1281978	1282054	.	-	.	Parent=CGI_10028905;
	scaffold22	TRF	Tandem_Repeat	1281978	1282054	57	+	.	.
scaffold22	subtractBed	intrn	1312793	1313259	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1312793	1313259	580	+	.	.
scaffold22	subtractBed	intrn	1313666	1313891	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1313666	1313891	283	+	.	.
scaffold22	subtractBed	intrn	1313891	1314454	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1313891	1314454	620	+	.	.
scaffold22	subtractBed	intrn	1316464	1316772	.	+	.	Parent=CGI_10028906;
	scaffold22	WUBlastX	DNA_NOF	1316464	1316772	137	+	.	.
scaffold22	subtractBed	intrn	1317043	1317043	.	+	.	Parent=CGI_10028906;
	scaffold22	WUBlastX	DNA_NOF	1317043	1317144	58	+	.	.
scaffold22	subtractBed	intrn	1316335	1316706	.	+	.	Parent=CGI_10028906;
	scaffold22	WUBlastX	DNA_MuDR	1316335	1316706	56	+	.	.
scaffold22	subtractBed	intrn	1318139	1318178	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1318139	1318178	80	+	.	.
scaffold22	subtractBed	intrn	1317858	1317866	.	+	.	Parent=CGI_10028906;
	scaffold22	WUBlastX	DNA_NOF	1317732	1317866	21	+	.	.
scaffold22	subtractBed	intrn	1318312	1318968	.	+	.	Parent=CGI_10028906;
	scaffold22	WUBlastX	DNA_NOF	1318312	1318968	52	+	.	.
scaffold22	subtractBed	intrn	1320837	1320863	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1320837	1320863	54	+	.	.
scaffold22	subtractBed	intrn	1321342	1321419	.	+	.	Parent=CGI_10028906;
	scaffold22	TRF	Tandem_Repeat	1321342	1321419	133	+	.	.
scaffold22	subtractBed	intrn	1368741	1368765	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1368741	1368765	50	+	.	.
scaffold22	subtractBed	intrn	1373200	1373249	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373200	1373249	50	+	.	.
scaffold22	subtractBed	intrn	1373333	1373661	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373333	1373661	128	+	.	.
scaffold22	subtractBed	intrn	1373398	1373466	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373398	1373466	52	+	.	.
scaffold22	subtractBed	intrn	1373383	1373472	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373383	1373472	62	+	.	.
scaffold22	subtractBed	intrn	1373397	1373470	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373397	1373470	69	+	.	.
scaffold22	subtractBed	intrn	1373333	1373718	.	-	.	Parent=CGI_10028908;
	scaffold22	TRF	Tandem_Repeat	1373333	1373718	97	+	.	.
scaffold22	subtractBed	intrn	1373200	1373249	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373200	1373249	50	+	.	.
scaffold22	subtractBed	intrn	1373333	1373661	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373333	1373661	128	+	.	.
scaffold22	subtractBed	intrn	1373398	1373466	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373398	1373466	52	+	.	.
scaffold22	subtractBed	intrn	1373383	1373472	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373383	1373472	62	+	.	.
scaffold22	subtractBed	intrn	1373397	1373470	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373397	1373470	69	+	.	.
scaffold22	subtractBed	intrn	1373333	1373718	.	+	.	Parent=CGI_10028909;
	scaffold22	TRF	Tandem_Repeat	1373333	1373718	97	+	.	.
scaffold22	subtractBed	intrn	1447369	1448452	.	+	.	Parent=CGI_10028915;
	scaffold22	TRF	Tandem_Repeat	1447369	1448452	1875	+	.	.
scaffold22	subtractBed	intrn	1449249	1449692	.	+	.	Parent=CGI_10028915;
	scaffold22	TRF	Tandem_Repeat	1449199	1449692	855	+	.	.
scaffold22	subtractBed	intrn	1458796	1458864	.	+	.	Parent=CGI_10028915;
	scaffold22	TRF	Tandem_Repeat	1458796	1458864	129	+	.	.
scaffold22	subtractBed	intrn	1458194	1458491	.	+	.	Parent=CGI_10028915;
	scaffold22	TRF	Tandem_Repeat	1458170	1458491	500	+	.	.
scaffold22	subtractBed	intrn	1464242	1464607	.	+	.	Parent=CGI_10028916;
	scaffold22	TRF	Tandem_Repeat	1464238	1464607	473	+	.	.
scaffold22	subtractBed	intrn	1464242	1464607	.	+	.	Parent=CGI_10028916;
	scaffold22	TRF	Tandem_Repeat	1464238	1464607	523	+	.	.
scaffold22	subtractBed	intrn	1469407	1469446	.	-	.	Parent=CGI_10028917;
	scaffold22	TRF	Tandem_Repeat	1469407	1469446	80	+	.	.
scaffold22	subtractBed	intrn	1645408	1645456	.	+	.	Parent=CGI_10028925;
	scaffold22	TRF	Tandem_Repeat	1645408	1645456	98	+	.	.
scaffold22	subtractBed	intrn	1660322	1660407	.	-	.	Parent=CGI_10028926;
	scaffold22	TRF	Tandem_Repeat	1660322	1660407	95	+	.	.
scaffold22	subtractBed	intrn	1660324	1660397	.	-	.	Parent=CGI_10028926;
	scaffold22	TRF	Tandem_Repeat	1660324	1660397	105	+	.	.
scaffold22	subtractBed	intrn	1660909	1660958	.	-	.	Parent=CGI_10028926;
	scaffold22	TRF	Tandem_Repeat	1660909	1660958	100	+	.	.
scaffold22	subtractBed	intrn	1685979	1686015	.	+	.	Parent=CGI_10028928;
	scaffold22	TRF	Tandem_Repeat	1685979	1686015	74	+	.	.
scaffold22	subtractBed	intrn	1686106	1686143	.	+	.	Parent=CGI_10028928;
	scaffold22	TRF	Tandem_Repeat	1686106	1686143	76	+	.	.
scaffold22	subtractBed	intrn	1689092	1689126	.	+	.	Parent=CGI_10028928;
	scaffold22	TRF	Tandem_Repeat	1689092	1689126	61	+	.	.
scaffold22	subtractBed	intrn	1700579	1700609	.	+	.	Parent=CGI_10028928;
	scaffold22	TRF	Tandem_Repeat	1700579	1700609	62	+	.	.
scaffold22	subtractBed	intrn	1700628	1700655	.	+	.	Parent=CGI_10028928;
	scaffold22	TRF	Tandem_Repeat	1700628	1700655	56	+	.	.
scaffold22	subtractBed	intrn	1710916	1710942	.	+	.	Parent=CGI_10028929;
	scaffold22	TRF	Tandem_Repeat	1710916	1710942	54	+	.	.
scaffold22	subtractBed	intrn	1711887	1711941	.	+	.	Parent=CGI_10028929;
	scaffold22	TRF	Tandem_Repeat	1711887	1711941	103	+	.	.
scaffold22	subtractBed	intrn	1712600	1712649	.	+	.	Parent=CGI_10028929;
	scaffold22	TRF	Tandem_Repeat	1712600	1712649	57	+	.	.
scaffold22	subtractBed	intrn	1717831	1717883	.	+	.	Parent=CGI_10028929;
	scaffold22	TRF	Tandem_Repeat	1717831	1717883	106	+	.	.
scaffold22	subtractBed	intrn	1748210	1748264	.	+	.	Parent=CGI_10028931;
	scaffold22	TRF	Tandem_Repeat	1748210	1748264	110	+	.	.
scaffold22	subtractBed	intrn	1765849	1765901	.	+	.	Parent=CGI_10028933;
	scaffold22	TRF	Tandem_Repeat	1765849	1765901	90	+	.	.
scaffold22	subtractBed	intrn	1796574	1796607	.	-	.	Parent=CGI_10028934;
	scaffold22	TRF	Tandem_Repeat	1796574	1796607	68	+	.	.
scaffold22	subtractBed	intrn	1819699	1819881	.	+	.	Parent=CGI_10028935;
	scaffold22	WUBlastX	LTR_Gypsy	1819567	1819881	25	+	.	.
scaffold22	subtractBed	intrn	1863538	1863541	.	+	.	Parent=CGI_10028937;
	scaffold22	WUBlastX	DNA_TcMar-Fot1	1863538	1863921	48	+	.	.
scaffold22	subtractBed	intrn	1863435	1863442	.	+	.	Parent=CGI_10028937;
	scaffold22	WUBlastX	DNA_TcMar-Fot1	1863119	1863442	65	+	.	.
scaffold22	subtractBed	intrn	1873216	1873294	.	-	.	Parent=CGI_10028939;
	scaffold22	TRF	Tandem_Repeat	1873216	1873294	158	+	.	.
scaffold22	subtractBed	intrn	1879835	1879975	.	-	.	Parent=CGI_10028939;
	scaffold22	TRF	Tandem_Repeat	1879835	1879975	138	+	.	.
scaffold22	subtractBed	intrn	1880967	1881100	.	-	.	Parent=CGI_10028939;
	scaffold22	TRF	Tandem_Repeat	1880967	1881100	121	+	.	.
scaffold221	subtractBed	intrn	79523	79528	.	-	.	Parent=CGI_10008344;
	scaffold221	WUBlastX	DNA_Harbinger	78728	79528	281	-	.	.
scaffold221	subtractBed	intrn	80246	80295	.	-	.	Parent=CGI_10008344;
	scaffold221	WUBlastX	DNA_Harbinger	80246	80638	140	-	.	.
scaffold222	subtractBed	intrn	31801	31832	.	+	.	Parent=CGI_10007121;
	scaffold222	WUBlastX	DNA_hAT	31801	32340	90	+	.	.
scaffold222	subtractBed	intrn	32027	32340	.	+	.	Parent=CGI_10007121;
	scaffold222	WUBlastX	DNA_hAT	31801	32340	90	+	.	.
scaffold222	subtractBed	intrn	59214	59269	.	+	.	Parent=CGI_10007122;
	scaffold222	TRF	Tandem_Repeat	59214	59269	94	+	.	.
scaffold222	subtractBed	intrn	61601	61634	.	+	.	Parent=CGI_10007122;
	scaffold222	TRF	Tandem_Repeat	61601	61634	50	+	.	.
scaffold222	subtractBed	intrn	140062	140090	.	-	.	Parent=CGI_10007124;
	scaffold222	TRF	Tandem_Repeat	140062	140090	58	+	.	.
scaffold222	subtractBed	intrn	137985	139706	.	-	.	Parent=CGI_10007124;
	scaffold222	WUBlastX	LINE_L2	137985	139706	1199	-	.	.
scaffold222	subtractBed	intrn	139578	139772	.	-	.	Parent=CGI_10007124;
	scaffold222	WUBlastX	LINE_RTE-BovB	139578	139772	25	-	.	.
scaffold222	subtractBed	intrn	137512	137652	.	-	.	Parent=CGI_10007124;
	scaffold222	WUBlastX	LINE_L2	137512	137652	26	-	.	.
scaffold222	subtractBed	intrn	140198	140767	.	-	.	Parent=CGI_10007124;
	scaffold222	WUBlastX	DNA_Crypton	140198	140767	75	-	.	.
scaffold223	subtractBed	intrn	3144	3191	.	-	.	Parent=CGI_10012904;
	scaffold223	TRF	Tandem_Repeat	3144	3191	96	+	.	.
scaffold223	subtractBed	intrn	5149	5856	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	5149	5856	458	-	.	.
scaffold223	subtractBed	intrn	2385	2657	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	DNA_Kolobok-Hyd	2385	2657	21	-	.	.
scaffold223	subtractBed	intrn	5146	5745	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	5146	5745	540	-	.	.
scaffold223	subtractBed	intrn	5756	6631	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	5756	6631	169	-	.	.
scaffold223	subtractBed	intrn	6667	7182	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	6667	7182	33	-	.	.
scaffold223	subtractBed	intrn	5041	5700	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	5041	5700	226	-	.	.
scaffold223	subtractBed	intrn	6260	6703	.	-	.	Parent=CGI_10012904;
	scaffold223	WUBlastX	LTR_Gypsy	6260	6703	96	-	.	.
scaffold223	subtractBed	intrn	71660	72570	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	71660	72570	1518	+	.	.
scaffold223	subtractBed	intrn	71660	72570	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	71660	72570	1527	+	.	.
scaffold223	subtractBed	intrn	71660	72570	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	71660	72570	1547	+	.	.
scaffold223	subtractBed	intrn	77746	78344	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	77746	78344	1171	+	.	.
scaffold223	subtractBed	intrn	77746	79290	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	77746	79290	2718	+	.	.
scaffold223	subtractBed	intrn	78298	79136	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	78298	79136	1651	+	.	.
scaffold223	subtractBed	intrn	78334	79278	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	78334	79278	1266	+	.	.
scaffold223	subtractBed	intrn	78970	79157	.	-	.	Parent=CGI_10012909;
	scaffold223	TRF	Tandem_Repeat	78970	79157	189	+	.	.
scaffold223	subtractBed	intrn	94518	95276	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	94518	95276	420	+	.	.
scaffold223	subtractBed	intrn	94799	95152	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	94799	95152	561	+	.	.
scaffold223	subtractBed	intrn	97538	98280	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	97538	98280	913	+	.	.
scaffold223	subtractBed	intrn	99613	99650	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	99613	99650	76	+	.	.
scaffold223	subtractBed	intrn	100843	100889	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	100843	100889	94	+	.	.
scaffold223	subtractBed	intrn	107907	108093	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	107907	108093	96	+	.	.
scaffold223	subtractBed	intrn	109373	109559	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	109373	109559	96	+	.	.
scaffold223	subtractBed	intrn	109755	110061	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	109755	110061	479	+	.	.
scaffold223	subtractBed	intrn	111043	111091	.	+	.	Parent=CGI_10012910;
	scaffold223	TRF	Tandem_Repeat	111043	111091	98	+	.	.
scaffold223	subtractBed	intrn	200097	200137	.	+	.	Parent=CGI_10012914;
	scaffold223	TRF	Tandem_Repeat	200097	200137	82	+	.	.
scaffold223	subtractBed	intrn	200741	200774	.	+	.	Parent=CGI_10012914;
	scaffold223	TRF	Tandem_Repeat	200741	200774	68	+	.	.
scaffold223	subtractBed	intrn	200817	200894	.	+	.	Parent=CGI_10012914;
	scaffold223	TRF	Tandem_Repeat	200817	200894	72	+	.	.
scaffold223	subtractBed	intrn	203672	204421	.	+	.	Parent=CGI_10012914;
	scaffold223	TRF	Tandem_Repeat	203672	204421	939	+	.	.
scaffold223	subtractBed	intrn	210949	211028	.	-	.	Parent=CGI_10012915;
	scaffold223	TRF	Tandem_Repeat	210949	211028	101	+	.	.
scaffold223	subtractBed	intrn	210955	212071	.	-	.	Parent=CGI_10012915;
	scaffold223	TRF	Tandem_Repeat	210955	212071	1176	+	.	.
scaffold223	subtractBed	intrn	211606	211684	.	-	.	Parent=CGI_10012915;
	scaffold223	TRF	Tandem_Repeat	211606	211684	50	+	.	.
scaffold223	subtractBed	intrn	211750	212081	.	-	.	Parent=CGI_10012915;
	scaffold223	TRF	Tandem_Repeat	211750	212081	70	+	.	.
scaffold223	subtractBed	intrn	213101	213299	.	-	.	Parent=CGI_10012915;
	scaffold223	TRF	Tandem_Repeat	213101	213299	130	+	.	.
scaffold223	subtractBed	intrn	222961	223115	.	+	.	Parent=CGI_10012918;
	scaffold223	TRF	Tandem_Repeat	222961	223115	177	+	.	.
scaffold223	subtractBed	intrn	226499	227174	.	+	.	Parent=CGI_10012918;
	scaffold223	TRF	Tandem_Repeat	226499	227174	976	+	.	.
scaffold223	subtractBed	intrn	226500	227174	.	+	.	Parent=CGI_10012918;
	scaffold223	TRF	Tandem_Repeat	226500	227174	1063	+	.	.
scaffold223	subtractBed	intrn	226912	227048	.	+	.	Parent=CGI_10012918;
	scaffold223	TRF	Tandem_Repeat	226912	227048	80	+	.	.
scaffold223	subtractBed	intrn	232262	232446	.	+	.	Parent=CGI_10012918;
	scaffold223	WUBlastX	LINE_RTE-BovB	232262	232567	59	+	.	.
scaffold223	subtractBed	intrn	279060	280706	.	-	.	Parent=CGI_10012923;
	scaffold223	TRF	Tandem_Repeat	279060	280706	2119	+	.	.
scaffold223	subtractBed	intrn	279060	280706	.	-	.	Parent=CGI_10012923;
	scaffold223	TRF	Tandem_Repeat	279060	280706	2087	+	.	.
scaffold223	subtractBed	intrn	283616	284398	.	-	.	Parent=CGI_10012923;
	scaffold223	WUBlastX	DNA_Harbinger	283616	284398	226	+	.	.
scaffold223	subtractBed	intrn	283616	284278	.	-	.	Parent=CGI_10012923;
	scaffold223	WUBlastX	DNA_Harbinger	283616	284278	260	+	.	.
scaffold223	subtractBed	intrn	283323	283451	.	-	.	Parent=CGI_10012923;
	scaffold223	WUBlastX	Unknown	283323	283451	25	+	.	.
scaffold224	subtractBed	intrn	15080	15126	.	-	.	Parent=CGI_10003614;
	scaffold224	TRF	Tandem_Repeat	15080	15126	94	+	.	.
scaffold224	subtractBed	intrn	49059	49298	.	-	.	Parent=CGI_10003616;
	scaffold224	TRF	Tandem_Repeat	49059	49298	183	+	.	.
scaffold224	subtractBed	intrn	49099	49310	.	-	.	Parent=CGI_10003616;
	scaffold224	TRF	Tandem_Repeat	49099	49310	170	+	.	.
scaffold224	subtractBed	intrn	53274	53648	.	-	.	Parent=CGI_10003616;
	scaffold224	WUBlastX	DNA_TcMar-Tc1	53274	53648	211	-	.	.
scaffold224	subtractBed	intrn	53274	53753	.	-	.	Parent=CGI_10003616;
	scaffold224	WUBlastX	DNA_TcMar-Tc1	53274	53753	119	-	.	.
scaffold224	subtractBed	intrn	53068	53259	.	-	.	Parent=CGI_10003616;
	scaffold224	WUBlastX	DNA_TcMar-Tc1	53068	53259	124	-	.	.
scaffold224	subtractBed	intrn	53642	54097	.	-	.	Parent=CGI_10003616;
	scaffold224	WUBlastX	DNA_TcMar-Tc1	53642	54097	91	-	.	.
scaffold226	subtractBed	intrn	114698	114747	.	-	.	Parent=CGI_10025342;
	scaffold226	TRF	Tandem_Repeat	114698	114747	100	+	.	.
scaffold226	subtractBed	intrn	207029	208203	.	+	.	Parent=CGI_10025345;
	scaffold226	TRF	Tandem_Repeat	207029	208203	1538	+	.	.
scaffold226	subtractBed	intrn	211279	211726	.	+	.	Parent=CGI_10025345;
	scaffold226	TRF	Tandem_Repeat	211279	211726	680	+	.	.
scaffold226	subtractBed	intrn	264339	264581	.	+	.	Parent=CGI_10025348;
	scaffold226	WUBlastX	LINE_RTE-X	264339	264581	40	+	.	.
scaffold226	subtractBed	intrn	272352	272473	.	+	.	Parent=CGI_10025348;
	scaffold226	TRF	Tandem_Repeat	272352	272473	172	+	.	.
scaffold226	subtractBed	intrn	275550	275607	.	+	.	Parent=CGI_10025348;
	scaffold226	TRF	Tandem_Repeat	275550	275607	116	+	.	.
scaffold226	subtractBed	intrn	425575	425625	.	+	.	Parent=CGI_10025356;
	scaffold226	TRF	Tandem_Repeat	425575	425625	61	+	.	.
scaffold226	subtractBed	intrn	425797	426474	.	+	.	Parent=CGI_10025356;
	scaffold226	TRF	Tandem_Repeat	425797	426474	957	+	.	.
scaffold226	subtractBed	intrn	437748	438666	.	-	.	Parent=CGI_10025357;
	scaffold226	TRF	Tandem_Repeat	437748	438666	1277	+	.	.
scaffold226	subtractBed	intrn	451354	451412	.	+	.	Parent=CGI_10025360;
	scaffold226	TRF	Tandem_Repeat	451354	451412	118	+	.	.
scaffold226	subtractBed	intrn	462263	462325	.	-	.	Parent=CGI_10025361;
	scaffold226	TRF	Tandem_Repeat	462263	462325	126	+	.	.
scaffold226	subtractBed	intrn	463070	463951	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	463070	463951	116	+	.	.
scaffold226	subtractBed	intrn	464352	464684	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	464352	464684	30	+	.	.
scaffold226	subtractBed	intrn	462406	462945	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	462406	462945	83	+	.	.
scaffold226	subtractBed	intrn	463022	464128	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	463022	464128	58	+	.	.
scaffold226	subtractBed	intrn	463178	463921	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	463178	463921	118	+	.	.
scaffold226	subtractBed	intrn	464105	464329	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	464105	464329	34	+	.	.
scaffold226	subtractBed	intrn	462526	462972	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_DIRS	462526	462972	120	+	.	.
scaffold226	subtractBed	intrn	467463	467582	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	467463	467582	41	+	.	.
scaffold226	subtractBed	intrn	468026	468316	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	468026	468316	145	+	.	.
scaffold226	subtractBed	intrn	469207	469614	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	469207	469614	169	+	.	.
scaffold226	subtractBed	intrn	468390	469151	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	468390	469151	384	+	.	.
scaffold226	subtractBed	intrn	467309	467410	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	467309	467410	39	+	.	.
scaffold226	subtractBed	intrn	468325	468417	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	468325	468417	43	+	.	.
scaffold226	subtractBed	intrn	469058	469213	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	469058	469213	92	+	.	.
scaffold226	subtractBed	intrn	469530	470489	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	469530	470489	214	+	.	.
scaffold226	subtractBed	intrn	467584	467763	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Ngaro	467584	467763	67	+	.	.
scaffold226	subtractBed	intrn	468313	468357	.	-	.	Parent=CGI_10025361;
	scaffold226	WUBlastX	LTR_Gypsy	468313	468357	25	+	.	.
scaffold226	subtractBed	intrn	474033	474070	.	-	.	Parent=CGI_10025361;
	scaffold226	TRF	Tandem_Repeat	474033	474070	67	+	.	.
scaffold226	subtractBed	intrn	490854	490891	.	-	.	Parent=CGI_10025361;
	scaffold226	TRF	Tandem_Repeat	490854	490891	53	+	.	.
scaffold226	subtractBed	intrn	491332	491357	.	-	.	Parent=CGI_10025361;
	scaffold226	TRF	Tandem_Repeat	491332	491357	52	+	.	.
scaffold226	subtractBed	intrn	492797	492847	.	-	.	Parent=CGI_10025361;
	scaffold226	TRF	Tandem_Repeat	492797	492847	102	+	.	.
scaffold226	subtractBed	intrn	497582	497633	.	-	.	Parent=CGI_10025362;
	scaffold226	TRF	Tandem_Repeat	497582	497633	86	+	.	.
scaffold226	subtractBed	intrn	602045	602757	.	-	.	Parent=CGI_10025368;
	scaffold226	TRF	Tandem_Repeat	602045	602757	1250	+	.	.
scaffold226	subtractBed	intrn	654007	654290	.	+	.	Parent=CGI_10025370;
	scaffold226	TRF	Tandem_Repeat	654007	654316	521	+	.	.
scaffold226	subtractBed	intrn	656026	656081	.	+	.	Parent=CGI_10025370;
	scaffold226	TRF	Tandem_Repeat	656026	656081	67	+	.	.
scaffold226	subtractBed	intrn	659796	659972	.	+	.	Parent=CGI_10025370;
	scaffold226	WUBlastX	LTR_Gypsy	659796	659972	42	-	.	.
scaffold226	subtractBed	intrn	660550	660948	.	+	.	Parent=CGI_10025370;
	scaffold226	WUBlastX	LTR_Gypsy-Cigr	660550	660948	62	-	.	.
scaffold226	subtractBed	intrn	660663	661022	.	+	.	Parent=CGI_10025370;
	scaffold226	WUBlastX	LTR_Gypsy-Cigr	660663	661022	49	-	.	.
scaffold226	subtractBed	intrn	676002	676062	.	+	.	Parent=CGI_10025370;
	scaffold226	TRF	Tandem_Repeat	676002	676062	68	+	.	.
scaffold226	subtractBed	intrn	677040	677089	.	+	.	Parent=CGI_10025370;
	scaffold226	TRF	Tandem_Repeat	677040	677089	75	+	.	.
scaffold226	subtractBed	intrn	780073	780750	.	+	.	Parent=CGI_10025375;
	scaffold226	WUBlastX	DNA_hAT	780073	780750	134	+	.	.
scaffold226	subtractBed	intrn	781794	782045	.	+	.	Parent=CGI_10025375;
	scaffold226	WUBlastX	DNA_hAT	781794	782045	91	+	.	.
scaffold226	subtractBed	intrn	781564	781680	.	+	.	Parent=CGI_10025375;
	scaffold226	WUBlastX	DNA_hAT	781564	781680	52	+	.	.
scaffold226	subtractBed	intrn	781498	781671	.	+	.	Parent=CGI_10025375;
	scaffold226	WUBlastX	DNA_hAT	781498	781671	49	+	.	.
scaffold226	subtractBed	intrn	787377	787403	.	+	.	Parent=CGI_10025375;
	scaffold226	TRF	Tandem_Repeat	787377	787403	54	+	.	.
scaffold226	subtractBed	intrn	839563	839785	.	+	.	Parent=CGI_10025381;
	scaffold226	TRF	Tandem_Repeat	839563	839785	401	+	.	.
scaffold226	subtractBed	intrn	843904	843930	.	-	.	Parent=CGI_10025382;
	scaffold226	TRF	Tandem_Repeat	843904	843930	54	+	.	.
scaffold226	subtractBed	intrn	859814	859859	.	-	.	Parent=CGI_10025383;
	scaffold226	TRF	Tandem_Repeat	859814	859859	92	+	.	.
scaffold226	subtractBed	intrn	868906	869046	.	-	.	Parent=CGI_10025384;
	scaffold226	TRF	Tandem_Repeat	868906	869046	120	+	.	.
scaffold226	subtractBed	intrn	888822	889252	.	+	.	Parent=CGI_10025385;
	scaffold226	TRF	Tandem_Repeat	888822	889252	547	+	.	.
scaffold226	subtractBed	intrn	888822	889252	.	+	.	Parent=CGI_10025385;
	scaffold226	TRF	Tandem_Repeat	888822	889252	641	+	.	.
scaffold226	subtractBed	intrn	894275	894314	.	+	.	Parent=CGI_10025385;
	scaffold226	TRF	Tandem_Repeat	894275	894314	62	+	.	.
scaffold226	subtractBed	intrn	894702	894733	.	+	.	Parent=CGI_10025385;
	scaffold226	TRF	Tandem_Repeat	894702	894733	64	+	.	.
scaffold226	subtractBed	intrn	918937	919041	.	-	.	Parent=CGI_10025388;
	scaffold226	TRF	Tandem_Repeat	918937	919041	74	+	.	.
scaffold226	subtractBed	intrn	918937	919042	.	-	.	Parent=CGI_10025388;
	scaffold226	TRF	Tandem_Repeat	918937	919042	101	+	.	.
scaffold226	subtractBed	intrn	921398	921721	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	921398	921721	173	+	.	.
scaffold226	subtractBed	intrn	921740	922651	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	921740	922651	217	+	.	.
scaffold226	subtractBed	intrn	921350	921733	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	921350	921733	99	+	.	.
scaffold226	subtractBed	intrn	920466	921299	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	920466	921299	192	+	.	.
scaffold226	subtractBed	intrn	921740	922240	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	921740	922240	251	+	.	.
scaffold226	subtractBed	intrn	920232	921296	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	920232	921296	86	+	.	.
scaffold226	subtractBed	intrn	921740	922456	.	-	.	Parent=CGI_10025388;
	scaffold226	WUBlastX	LTR_Gypsy	921740	922456	221	+	.	.
scaffold226	subtractBed	intrn	939106	939153	.	+	.	Parent=CGI_10025389;
	scaffold226	TRF	Tandem_Repeat	939106	939153	78	+	.	.
scaffold226	subtractBed	intrn	948749	948799	.	+	.	Parent=CGI_10025390;
	scaffold226	TRF	Tandem_Repeat	948749	948799	102	+	.	.
scaffold226	subtractBed	intrn	1038332	1039735	.	-	.	Parent=CGI_10025398;
	scaffold226	TRF	Tandem_Repeat	1038332	1039735	719	+	.	.
scaffold226	subtractBed	intrn	1038332	1039732	.	-	.	Parent=CGI_10025398;
	scaffold226	TRF	Tandem_Repeat	1038332	1039732	765	+	.	.
scaffold226	subtractBed	intrn	1038349	1039442	.	-	.	Parent=CGI_10025398;
	scaffold226	TRF	Tandem_Repeat	1038349	1039442	647	+	.	.
scaffold226	subtractBed	intrn	1039718	1040133	.	-	.	Parent=CGI_10025398;
	scaffold226	TRF	Tandem_Repeat	1039718	1040133	423	+	.	.
scaffold226	subtractBed	intrn	1052980	1053387	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	LINE_L2	1052980	1053387	33	-	.	.
scaffold226	subtractBed	intrn	1052839	1053249	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	LINE_RTE-X	1052839	1053249	44	-	.	.
scaffold226	subtractBed	intrn	1052360	1052854	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	LINE_RTE-BovB	1052360	1052854	43	-	.	.
scaffold226	subtractBed	intrn	1052956	1053261	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	LINE_RTE-X	1052956	1053261	115	-	.	.
scaffold226	subtractBed	intrn	1052354	1052758	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	LINE_RTE-X	1052354	1052758	92	-	.	.
scaffold226	subtractBed	intrn	1057662	1057877	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	DNA_TcMar-Marin	1057662	1057877	65	-	.	.
scaffold226	subtractBed	intrn	1058010	1058081	.	-	.	Parent=CGI_10025399;
	scaffold226	WUBlastX	DNA_TcMar-Marin	1058010	1058081	20	-	.	.
scaffold227	subtractBed	intrn	31081	31184	.	-	.	Parent=CGI_10015803;
	scaffold227	TRF	Tandem_Repeat	31081	31184	181	+	.	.
scaffold227	subtractBed	intrn	73677	73792	.	+	.	Parent=CGI_10015807;
	scaffold227	TRF	Tandem_Repeat	73677	73792	207	+	.	.
scaffold227	subtractBed	intrn	79263	79298	.	+	.	Parent=CGI_10015808;
	scaffold227	TRF	Tandem_Repeat	79263	79298	72	+	.	.
scaffold227	subtractBed	intrn	79344	79451	.	+	.	Parent=CGI_10015808;
	scaffold227	TRF	Tandem_Repeat	79344	79451	157	+	.	.
scaffold227	subtractBed	intrn	86428	86542	.	+	.	Parent=CGI_10015809;
	scaffold227	TRF	Tandem_Repeat	86428	86542	212	+	.	.
scaffold227	subtractBed	intrn	101399	101456	.	+	.	Parent=CGI_10015810;
	scaffold227	TRF	Tandem_Repeat	101399	101456	116	+	.	.
scaffold227	subtractBed	intrn	150404	150454	.	-	.	Parent=CGI_10015816;
	scaffold227	TRF	Tandem_Repeat	150404	150454	102	+	.	.
scaffold227	subtractBed	intrn	183643	184056	.	-	.	Parent=CGI_10015818;
	scaffold227	TRF	Tandem_Repeat	183583	184056	894	+	.	.
scaffold227	subtractBed	intrn	191184	191231	.	-	.	Parent=CGI_10015818;
	scaffold227	TRF	Tandem_Repeat	191184	191231	96	+	.	.
scaffold227	subtractBed	intrn	196037	196081	.	-	.	Parent=CGI_10015818;
	scaffold227	TRF	Tandem_Repeat	196037	196081	90	+	.	.
scaffold227	subtractBed	intrn	201178	201208	.	+	.	Parent=CGI_10015819;
	scaffold227	TRF	Tandem_Repeat	201178	201208	53	+	.	.
scaffold227	subtractBed	intrn	202407	202460	.	+	.	Parent=CGI_10015819;
	scaffold227	TRF	Tandem_Repeat	202407	202460	108	+	.	.
scaffold227	subtractBed	intrn	203647	203692	.	+	.	Parent=CGI_10015819;
	scaffold227	TRF	Tandem_Repeat	203647	203692	92	+	.	.
scaffold227	subtractBed	intrn	327331	327387	.	-	.	Parent=CGI_10015826;
	scaffold227	TRF	Tandem_Repeat	327331	327387	114	+	.	.
scaffold227	subtractBed	intrn	342767	342823	.	+	.	Parent=CGI_10015827;
	scaffold227	TRF	Tandem_Repeat	342767	342823	62	+	.	.
scaffold227	subtractBed	intrn	346515	346585	.	+	.	Parent=CGI_10015827;
	scaffold227	TRF	Tandem_Repeat	346515	346585	135	+	.	.
scaffold230	subtractBed	intrn	128724	128753	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	128724	128753	51	+	.	.
scaffold230	subtractBed	intrn	128753	128798	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	128753	128798	92	+	.	.
scaffold230	subtractBed	intrn	129691	129825	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129691	129825	56	-	.	.
scaffold230	subtractBed	intrn	129566	129691	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129566	129691	44	-	.	.
scaffold230	subtractBed	intrn	129697	129885	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129697	129885	44	-	.	.
scaffold230	subtractBed	intrn	129640	129780	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129640	129780	55	-	.	.
scaffold230	subtractBed	intrn	129539	129691	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129539	129691	29	-	.	.
scaffold230	subtractBed	intrn	129691	129777	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129691	129777	68	-	.	.
scaffold230	subtractBed	intrn	129903	130286	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	129903	130286	130	-	.	.
scaffold230	subtractBed	intrn	132858	133444	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	132858	133444	540	+	.	.
scaffold230	subtractBed	intrn	132858	133444	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	132858	133444	759	+	.	.
scaffold230	subtractBed	intrn	130283	131179	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	130283	131179	267	-	.	.
scaffold230	subtractBed	intrn	130771	131721	.	-	.	Parent=CGI_10011251;
	scaffold230	WUBlastX	DNA_hAT-Tip100	130771	131721	321	-	.	.
scaffold230	subtractBed	intrn	136765	138132	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	136765	138132	2105	+	.	.
scaffold230	subtractBed	intrn	136765	138132	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	136765	138132	2119	+	.	.
scaffold230	subtractBed	intrn	143290	143349	.	-	.	Parent=CGI_10011251;
	scaffold230	TRF	Tandem_Repeat	143290	143349	93	+	.	.
scaffold230	subtractBed	intrn	187215	187245	.	-	.	Parent=CGI_10011252;
	scaffold230	TRF	Tandem_Repeat	187215	187245	62	+	.	.
scaffold230	subtractBed	intrn	196310	196600	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_Ngaro	196310	196600	47	+	.	.
scaffold230	subtractBed	intrn	196599	196892	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_Ngaro	196599	196892	69	+	.	.
scaffold230	subtractBed	intrn	203128	203152	.	-	.	Parent=CGI_10011252;
	scaffold230	TRF	Tandem_Repeat	203128	203152	50	+	.	.
scaffold230	subtractBed	intrn	204279	204361	.	-	.	Parent=CGI_10011252;
	scaffold230	TRF	Tandem_Repeat	204279	204361	69	+	.	.
scaffold230	subtractBed	intrn	204438	204513	.	-	.	Parent=CGI_10011252;
	scaffold230	TRF	Tandem_Repeat	204438	204513	55	+	.	.
scaffold230	subtractBed	intrn	205198	205287	.	-	.	Parent=CGI_10011252;
	scaffold230	TRF	Tandem_Repeat	205198	205287	65	+	.	.
scaffold230	subtractBed	intrn	209757	210194	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LINE_Penelope	209757	210194	162	+	.	.
scaffold230	subtractBed	intrn	210109	210501	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LINE_Penelope	210109	210501	100	+	.	.
scaffold230	subtractBed	intrn	208520	209572	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LINE_Penelope	208520	209572	601	+	.	.
scaffold230	subtractBed	intrn	218641	219048	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_DIRS	218641	219048	328	-	.	.
scaffold230	subtractBed	intrn	218503	218973	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_Gypsy	218503	218973	57	-	.	.
scaffold230	subtractBed	intrn	218575	218991	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_Gypsy	218575	218991	71	-	.	.
scaffold230	subtractBed	intrn	215049	215945	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_DIRS	215049	215945	308	-	.	.
scaffold230	subtractBed	intrn	215999	217171	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_DIRS	215999	217171	441	-	.	.
scaffold230	subtractBed	intrn	218644	219177	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_DIRS	218644	219177	281	-	.	.
scaffold230	subtractBed	intrn	218641	219426	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_Gypsy	218641	219426	106	-	.	.
scaffold230	subtractBed	intrn	216185	217171	.	-	.	Parent=CGI_10011252;
	scaffold230	WUBlastX	LTR_DIRS	216185	217171	474	-	.	.
scaffold230	subtractBed	intrn	252418	252777	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_ERV1	252418	252777	81	+	.	.
scaffold230	subtractBed	intrn	251973	252386	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	251973	252386	252	+	.	.
scaffold230	subtractBed	intrn	252391	252714	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	252391	252714	274	+	.	.
scaffold230	subtractBed	intrn	252704	252826	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	252704	252826	66	+	.	.
scaffold230	subtractBed	intrn	251877	252395	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	251877	252395	227	+	.	.
scaffold230	subtractBed	intrn	251654	251869	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	251654	251869	64	+	.	.
scaffold230	subtractBed	intrn	252704	252859	.	-	.	Parent=CGI_10011254;
	scaffold230	WUBlastX	LTR_Gypsy	252704	252859	51	+	.	.
scaffold230	subtractBed	intrn	268489	268557	.	-	.	Parent=CGI_10011254;
	scaffold230	TRF	Tandem_Repeat	268489	268557	57	+	.	.
scaffold232	subtractBed	intrn	9444	9492	.	+	.	Parent=CGI_10004958;
	scaffold232	TRF	Tandem_Repeat	9444	9492	98	+	.	.
scaffold232	subtractBed	intrn	56789	56831	.	-	.	Parent=CGI_10004960;
	scaffold232	TRF	Tandem_Repeat	56789	56831	86	+	.	.
scaffold232	subtractBed	intrn	56952	56994	.	-	.	Parent=CGI_10004960;
	scaffold232	TRF	Tandem_Repeat	56952	56994	86	+	.	.
scaffold236	subtractBed	intrn	33626	33650	.	-	.	Parent=CGI_10018134;
	scaffold236	TRF	Tandem_Repeat	33626	33650	50	+	.	.
scaffold236	subtractBed	intrn	38300	38329	.	+	.	Parent=CGI_10018135;
	scaffold236	TRF	Tandem_Repeat	38300	38329	60	+	.	.
scaffold236	subtractBed	intrn	37740	38174	.	+	.	Parent=CGI_10018135;
	scaffold236	WUBlastX	LINE_L2	37740	38174	51	+	.	.
scaffold236	subtractBed	intrn	37599	37994	.	+	.	Parent=CGI_10018135;
	scaffold236	WUBlastX	LTR_ERV1	37599	37994	41	+	.	.
scaffold236	subtractBed	intrn	37716	38102	.	+	.	Parent=CGI_10018135;
	scaffold236	WUBlastX	LINE_L2	37716	38102	62	+	.	.
scaffold236	subtractBed	intrn	41030	41072	.	+	.	Parent=CGI_10018135;
	scaffold236	TRF	Tandem_Repeat	41030	41072	79	+	.	.
scaffold236	subtractBed	intrn	85271	85304	.	-	.	Parent=CGI_10018136;
	scaffold236	TRF	Tandem_Repeat	85271	85304	52	+	.	.
scaffold236	subtractBed	intrn	100149	100214	.	-	.	Parent=CGI_10018136;
	scaffold236	TRF	Tandem_Repeat	100149	100214	132	+	.	.
scaffold236	subtractBed	intrn	168044	168203	.	-	.	Parent=CGI_10018137;
	scaffold236	TRF	Tandem_Repeat	168044	168203	203	+	.	.
scaffold236	subtractBed	intrn	172133	172174	.	-	.	Parent=CGI_10018137;
	scaffold236	TRF	Tandem_Repeat	172133	172174	59	+	.	.
scaffold236	subtractBed	intrn	230105	230119	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	229601	230119	272	+	.	.
scaffold236	subtractBed	intrn	230422	230435	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230235	230435	127	+	.	.
scaffold236	subtractBed	intrn	230515	230554	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230515	230892	88	+	.	.
scaffold236	subtractBed	intrn	230894	230912	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230894	231106	77	+	.	.
scaffold236	subtractBed	intrn	230816	230892	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230515	230892	88	+	.	.
scaffold236	subtractBed	intrn	230816	230817	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230557	230817	104	+	.	.
scaffold236	subtractBed	intrn	231085	231106	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	230894	231106	77	+	.	.
scaffold236	subtractBed	intrn	231169	231188	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	231169	231339	115	+	.	.
scaffold236	subtractBed	intrn	231338	231339	.	+	.	Parent=CGI_10018139;
	scaffold236	WUBlastX	DNA_Kolobok	231169	231339	115	+	.	.
scaffold236	subtractBed	intrn	231620	231766	.	-	.	Parent=CGI_10018140;
	scaffold236	WUBlastX	DNA_Kolobok	231620	231766	71	-	.	.
scaffold236	subtractBed	intrn	231620	231805	.	-	.	Parent=CGI_10018140;
	scaffold236	WUBlastX	DNA_Kolobok	231620	231805	65	-	.	.
scaffold236	subtractBed	intrn	232070	232252	.	-	.	Parent=CGI_10018140;
	scaffold236	WUBlastX	DNA_Kolobok	232070	232252	31	-	.	.
scaffold236	subtractBed	intrn	249298	249362	.	-	.	Parent=CGI_10018141;
	scaffold236	TRF	Tandem_Repeat	249298	249362	67	+	.	.
scaffold236	subtractBed	intrn	249954	249996	.	-	.	Parent=CGI_10018141;
	scaffold236	TRF	Tandem_Repeat	249954	249996	77	+	.	.
scaffold236	subtractBed	intrn	287166	287299	.	-	.	Parent=CGI_10018143;
	scaffold236	TRF	Tandem_Repeat	287166	287312	197	+	.	.
scaffold236	subtractBed	intrn	291318	291375	.	-	.	Parent=CGI_10018143;
	scaffold236	TRF	Tandem_Repeat	291318	291375	91	+	.	.
scaffold236	subtractBed	intrn	291318	291363	.	-	.	Parent=CGI_10018143;
	scaffold236	TRF	Tandem_Repeat	291318	291363	65	+	.	.
scaffold236	subtractBed	intrn	291318	291375	.	-	.	Parent=CGI_10018143;
	scaffold236	TRF	Tandem_Repeat	291318	291375	73	+	.	.
scaffold236	subtractBed	intrn	299007	299071	.	-	.	Parent=CGI_10018143;
	scaffold236	TRF	Tandem_Repeat	299007	299071	85	+	.	.
scaffold236	subtractBed	intrn	378484	378522	.	+	.	Parent=CGI_10018155;
	scaffold236	TRF	Tandem_Repeat	378484	378522	78	+	.	.
scaffold236	subtractBed	intrn	380391	380440	.	+	.	Parent=CGI_10018155;
	scaffold236	TRF	Tandem_Repeat	380391	380440	59	+	.	.
scaffold236	subtractBed	intrn	382201	382265	.	+	.	Parent=CGI_10018155;
	scaffold236	TRF	Tandem_Repeat	382201	382265	67	+	.	.
scaffold236	subtractBed	intrn	388591	388648	.	+	.	Parent=CGI_10018156;
	scaffold236	TRF	Tandem_Repeat	388591	388648	73	+	.	.
scaffold236	subtractBed	intrn	388592	388645	.	+	.	Parent=CGI_10018156;
	scaffold236	TRF	Tandem_Repeat	388592	388645	56	+	.	.
scaffold236	subtractBed	intrn	390881	390945	.	+	.	Parent=CGI_10018156;
	scaffold236	TRF	Tandem_Repeat	390881	390945	112	+	.	.
scaffold236	subtractBed	intrn	424323	424349	.	+	.	Parent=CGI_10018157;
	scaffold236	TRF	Tandem_Repeat	424323	424349	54	+	.	.
scaffold236	subtractBed	intrn	515954	515986	.	-	.	Parent=CGI_10018162;
	scaffold236	TRF	Tandem_Repeat	515954	515986	57	+	.	.
scaffold237	subtractBed	intrn	97045	97078	.	-	.	Parent=CGI_10021566;
	scaffold237	TRF	Tandem_Repeat	97045	97078	68	+	.	.
scaffold237	subtractBed	intrn	125891	126134	.	-	.	Parent=CGI_10021567;
	scaffold237	TRF	Tandem_Repeat	125878	126134	424	+	.	.
scaffold237	subtractBed	intrn	126693	126918	.	-	.	Parent=CGI_10021567;
	scaffold237	TRF	Tandem_Repeat	126693	126932	167	+	.	.
scaffold237	subtractBed	intrn	126693	126918	.	-	.	Parent=CGI_10021567;
	scaffold237	TRF	Tandem_Repeat	126693	126932	180	+	.	.
scaffold237	subtractBed	intrn	156620	156753	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	156620	156753	169	+	.	.
scaffold237	subtractBed	intrn	159238	159427	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	159238	159440	244	+	.	.
scaffold237	subtractBed	intrn	162507	163842	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	162507	163867	2454	+	.	.
scaffold237	subtractBed	intrn	162507	163842	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	162507	163867	2415	+	.	.
scaffold237	subtractBed	intrn	164492	164754	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	164492	164754	436	+	.	.
scaffold237	subtractBed	intrn	167987	168202	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	167987	168202	233	+	.	.
scaffold237	subtractBed	intrn	170166	170363	.	-	.	Parent=CGI_10021568;
	scaffold237	TRF	Tandem_Repeat	170166	170363	360	+	.	.
scaffold237	subtractBed	intrn	189741	190429	.	-	.	Parent=CGI_10021569;
	scaffold237	TRF	Tandem_Repeat	189741	190429	946	+	.	.
scaffold237	subtractBed	intrn	190179	190323	.	-	.	Parent=CGI_10021569;
	scaffold237	TRF	Tandem_Repeat	190179	190323	87	+	.	.
scaffold237	subtractBed	intrn	190631	190915	.	-	.	Parent=CGI_10021569;
	scaffold237	TRF	Tandem_Repeat	190631	190915	419	+	.	.
scaffold237	subtractBed	intrn	190717	190862	.	-	.	Parent=CGI_10021569;
	scaffold237	TRF	Tandem_Repeat	190717	190862	83	+	.	.
scaffold237	subtractBed	intrn	189736	190898	.	-	.	Parent=CGI_10021569;
	scaffold237	TRF	Tandem_Repeat	189736	190898	964	+	.	.
scaffold237	subtractBed	intrn	206356	207401	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	206356	207401	1385	+	.	.
scaffold237	subtractBed	intrn	206356	207401	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	206356	207401	1289	+	.	.
scaffold237	subtractBed	intrn	210494	210770	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	210494	210770	518	+	.	.
scaffold237	subtractBed	intrn	210772	211366	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	210772	211366	994	+	.	.
scaffold237	subtractBed	intrn	210772	211934	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	210772	211934	1710	+	.	.
scaffold237	subtractBed	intrn	211365	211934	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	211365	211934	802	+	.	.
scaffold237	subtractBed	intrn	214141	214446	.	-	.	Parent=CGI_10021572;
	scaffold237	TRF	Tandem_Repeat	214141	214467	494	+	.	.
scaffold237	subtractBed	intrn	222411	223461	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	222411	223461	1029	+	.	.
scaffold237	subtractBed	intrn	224480	225404	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	224480	225404	1129	+	.	.
scaffold237	subtractBed	intrn	226326	227249	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	226326	227249	1695	+	.	.
scaffold237	subtractBed	intrn	227729	227841	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	227729	227841	113	+	.	.
scaffold237	subtractBed	intrn	229892	230649	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	229892	230649	972	+	.	.
scaffold237	subtractBed	intrn	233470	233811	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	233470	233811	517	+	.	.
scaffold237	subtractBed	intrn	234176	234498	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	234176	234498	341	+	.	.
scaffold237	subtractBed	intrn	234176	234497	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	234176	234497	300	+	.	.
scaffold237	subtractBed	intrn	237752	237855	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	237752	237855	163	+	.	.
scaffold237	subtractBed	intrn	238549	238984	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	238549	238984	662	+	.	.
scaffold237	subtractBed	intrn	245197	245343	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	245197	245343	159	+	.	.
scaffold237	subtractBed	intrn	245197	245343	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	245197	245343	177	+	.	.
scaffold237	subtractBed	intrn	245540	245646	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	245540	245646	111	+	.	.
scaffold237	subtractBed	intrn	246181	246354	.	+	.	Parent=CGI_10021574;
	scaffold237	WUBlastX	DNA_Zator	246181	246354	48	+	.	.
scaffold237	subtractBed	intrn	246617	246670	.	+	.	Parent=CGI_10021574;
	scaffold237	WUBlastX	DNA_Zator	246617	246670	29	+	.	.
scaffold237	subtractBed	intrn	249930	249979	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	249930	249979	55	+	.	.
scaffold237	subtractBed	intrn	250697	250811	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	250697	250811	94	+	.	.
scaffold237	subtractBed	intrn	250753	250917	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	250753	250917	65	+	.	.
scaffold237	subtractBed	intrn	250727	250947	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	250727	250947	180	+	.	.
scaffold237	subtractBed	intrn	250753	250917	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	250753	250917	77	+	.	.
scaffold237	subtractBed	intrn	253138	253175	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	253138	253175	76	+	.	.
scaffold237	subtractBed	intrn	253345	253392	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	253345	253392	96	+	.	.
scaffold237	subtractBed	intrn	254205	254317	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	254205	254317	65	+	.	.
scaffold237	subtractBed	intrn	254205	254401	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	254205	254401	193	+	.	.
scaffold237	subtractBed	intrn	254247	254432	.	+	.	Parent=CGI_10021574;
	scaffold237	TRF	Tandem_Repeat	254247	254432	182	+	.	.
scaffold237	subtractBed	intrn	282000	282484	.	+	.	Parent=CGI_10021577;
	scaffold237	TRF	Tandem_Repeat	282000	282484	818	+	.	.
scaffold237	subtractBed	intrn	284423	285535	.	+	.	Parent=CGI_10021577;
	scaffold237	TRF	Tandem_Repeat	284423	285535	1336	+	.	.
scaffold237	subtractBed	intrn	284423	285961	.	+	.	Parent=CGI_10021577;
	scaffold237	TRF	Tandem_Repeat	284423	285961	1491	+	.	.
scaffold237	subtractBed	intrn	285172	285244	.	+	.	Parent=CGI_10021577;
	scaffold237	TRF	Tandem_Repeat	285172	285244	71	+	.	.
scaffold237	subtractBed	intrn	285743	285961	.	+	.	Parent=CGI_10021577;
	scaffold237	TRF	Tandem_Repeat	285743	285961	261	+	.	.
scaffold237	subtractBed	intrn	306400	306598	.	+	.	Parent=CGI_10021580;
	scaffold237	TRF	Tandem_Repeat	306400	306598	398	+	.	.
scaffold237	subtractBed	intrn	308793	309015	.	+	.	Parent=CGI_10021580;
	scaffold237	TRF	Tandem_Repeat	308793	309015	437	+	.	.
scaffold237	subtractBed	intrn	309813	309921	.	+	.	Parent=CGI_10021580;
	scaffold237	TRF	Tandem_Repeat	309813	309921	155	+	.	.
scaffold237	subtractBed	intrn	320685	320744	.	+	.	Parent=CGI_10021581;
	scaffold237	TRF	Tandem_Repeat	320685	320744	57	+	.	.
scaffold237	subtractBed	intrn	319245	320036	.	+	.	Parent=CGI_10021581;
	scaffold237	WUBlastX	LINE_RTE-X	319245	320036	185	-	.	.
scaffold237	subtractBed	intrn	319359	320393	.	+	.	Parent=CGI_10021581;
	scaffold237	WUBlastX	LINE_RTE-X	319359	320393	182	-	.	.
scaffold237	subtractBed	intrn	320258	320656	.	+	.	Parent=CGI_10021581;
	scaffold237	WUBlastX	LINE_RTE-X	320258	320656	102	+	.	.
scaffold237	subtractBed	intrn	360938	360964	.	+	.	Parent=CGI_10021582;
	scaffold237	TRF	Tandem_Repeat	360938	360964	54	+	.	.
scaffold237	subtractBed	intrn	564158	564269	.	-	.	Parent=CGI_10021586;
	scaffold237	TRF	Tandem_Repeat	564158	564269	82	+	.	.
scaffold237	subtractBed	intrn	616919	617571	.	+	.	Parent=CGI_10021588;
	scaffold237	TRF	Tandem_Repeat	616919	617571	968	+	.	.
scaffold237	subtractBed	intrn	643013	643069	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	643013	643069	114	+	.	.
scaffold237	subtractBed	intrn	646142	646625	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	646142	646625	346	+	.	.
scaffold237	subtractBed	intrn	646153	646625	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	646153	646625	409	+	.	.
scaffold237	subtractBed	intrn	647180	648300	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	647180	648300	2143	+	.	.
scaffold237	subtractBed	intrn	649399	649432	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	649399	649432	68	+	.	.
scaffold237	subtractBed	intrn	650149	650183	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	650149	650183	70	+	.	.
scaffold237	subtractBed	intrn	650387	650575	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	650387	650575	360	+	.	.
scaffold237	subtractBed	intrn	652379	652492	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	652379	652492	72	+	.	.
scaffold237	subtractBed	intrn	652439	652492	.	+	.	Parent=CGI_10021589;
	scaffold237	TRF	Tandem_Repeat	652439	652492	90	+	.	.
scaffold237	subtractBed	intrn	666254	666657	.	+	.	Parent=CGI_10021590;
	scaffold237	TRF	Tandem_Repeat	666254	666657	628	+	.	.
scaffold240	subtractBed	intrn	159931	160113	.	-	.	Parent=CGI_10007850;
	scaffold240	WUBlastX	LINE_CR1-L2	159931	160113	65	-	.	.
scaffold240	subtractBed	intrn	164141	164185	.	-	.	Parent=CGI_10007850;
	scaffold240	TRF	Tandem_Repeat	164141	164185	72	+	.	.
scaffold240	subtractBed	intrn	164141	164188	.	-	.	Parent=CGI_10007850;
	scaffold240	TRF	Tandem_Repeat	164141	164188	51	+	.	.
scaffold240	subtractBed	intrn	170609	170725	.	+	.	Parent=CGI_10007851;
	scaffold240	WUBlastX	LINE_Penelope	170609	170725	28	+	.	.
scaffold240	subtractBed	intrn	170763	171167	.	+	.	Parent=CGI_10007851;
	scaffold240	WUBlastX	LINE_Penelope	170763	171167	106	+	.	.
scaffold240	subtractBed	intrn	170639	170818	.	+	.	Parent=CGI_10007851;
	scaffold240	WUBlastX	LINE_Penelope	170639	170818	58	+	.	.
scaffold241	subtractBed	intrn	20313	20411	.	+	.	Parent=CGI_10025082;
	scaffold241	TRF	Tandem_Repeat	20313	20411	81	+	.	.
scaffold241	subtractBed	intrn	51022	51065	.	+	.	Parent=CGI_10025089;
	scaffold241	TRF	Tandem_Repeat	51022	51065	65	+	.	.
scaffold241	subtractBed	intrn	64967	65230	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	64967	65230	28	-	.	.
scaffold241	subtractBed	intrn	63742	63855	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	63742	63855	58	-	.	.
scaffold241	subtractBed	intrn	63855	64793	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	63855	64793	455	-	.	.
scaffold241	subtractBed	intrn	64770	64916	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	64770	64916	39	-	.	.
scaffold241	subtractBed	intrn	64913	65188	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	64913	65188	139	-	.	.
scaffold241	subtractBed	intrn	62770	63066	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	62770	63066	172	-	.	.
scaffold241	subtractBed	intrn	63030	63407	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	63030	63407	181	-	.	.
scaffold241	subtractBed	intrn	63402	63584	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	63402	63584	136	-	.	.
scaffold241	subtractBed	intrn	65337	65849	.	+	.	Parent=CGI_10025090;
	scaffold241	WUBlastX	LTR_DIRS	65337	65849	189	-	.	.
scaffold241	subtractBed	intrn	76018	76099	.	+	.	Parent=CGI_10025090;
	scaffold241	TRF	Tandem_Repeat	76018	76099	148	+	.	.
scaffold241	subtractBed	intrn	84611	84973	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	84611	84973	290	+	.	.
scaffold241	subtractBed	intrn	83866	84141	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	83866	84141	194	+	.	.
scaffold241	subtractBed	intrn	82338	83054	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	82338	83054	228	+	.	.
scaffold241	subtractBed	intrn	83174	83869	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	83174	83869	256	+	.	.
scaffold241	subtractBed	intrn	84135	84611	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	84135	84611	321	+	.	.
scaffold241	subtractBed	intrn	82470	83048	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	82470	83048	321	+	.	.
scaffold241	subtractBed	intrn	84952	86841	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	84952	86841	634	+	.	.
scaffold241	subtractBed	intrn	82533	83162	.	+	.	Parent=CGI_10025091;
	scaffold241	WUBlastX	LTR_Pao	82533	83162	309	+	.	.
scaffold241	subtractBed	intrn	99113	99156	.	+	.	Parent=CGI_10025091;
	scaffold241	TRF	Tandem_Repeat	99113	99156	88	+	.	.
scaffold241	subtractBed	intrn	111314	111343	.	+	.	Parent=CGI_10025092;
	scaffold241	TRF	Tandem_Repeat	111314	111343	60	+	.	.
scaffold241	subtractBed	intrn	124731	125060	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1-Tx1	124731	125060	44	-	.	.
scaffold241	subtractBed	intrn	124806	125078	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1	124806	125078	46	-	.	.
scaffold241	subtractBed	intrn	125084	125791	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1-Tx1	125084	125791	59	-	.	.
scaffold241	subtractBed	intrn	126079	127176	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1-Tx1	126079	127176	92	-	.	.
scaffold241	subtractBed	intrn	125817	126035	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1	125817	126035	53	-	.	.
scaffold241	subtractBed	intrn	124830	125000	.	+	.	Parent=CGI_10025092;
	scaffold241	WUBlastX	LINE_L1	124830	125000	62	-	.	.
scaffold241	subtractBed	intrn	135435	135482	.	+	.	Parent=CGI_10025092;
	scaffold241	TRF	Tandem_Repeat	135435	135482	78	+	.	.
scaffold241	subtractBed	intrn	178341	178625	.	+	.	Parent=CGI_10025093;
	scaffold241	TRF	Tandem_Repeat	178341	178625	276	+	.	.
scaffold241	subtractBed	intrn	178441	178655	.	+	.	Parent=CGI_10025093;
	scaffold241	TRF	Tandem_Repeat	178441	178655	128	+	.	.
scaffold241	subtractBed	intrn	178497	178656	.	+	.	Parent=CGI_10025093;
	scaffold241	TRF	Tandem_Repeat	178497	178656	212	+	.	.
scaffold241	subtractBed	intrn	182291	182321	.	+	.	Parent=CGI_10025093;
	scaffold241	TRF	Tandem_Repeat	182291	182321	53	+	.	.
scaffold241	subtractBed	intrn	195547	197082	.	-	.	Parent=CGI_10025095;
	scaffold241	TRF	Tandem_Repeat	195547	197082	2079	+	.	.
scaffold241	subtractBed	intrn	206511	207370	.	-	.	Parent=CGI_10025095;
	scaffold241	TRF	Tandem_Repeat	206511	207370	839	+	.	.
scaffold241	subtractBed	intrn	206517	207370	.	-	.	Parent=CGI_10025095;
	scaffold241	TRF	Tandem_Repeat	206517	207370	848	+	.	.
scaffold241	subtractBed	intrn	207854	208107	.	-	.	Parent=CGI_10025095;
	scaffold241	TRF	Tandem_Repeat	207854	208107	311	+	.	.
scaffold241	subtractBed	intrn	210825	210861	.	-	.	Parent=CGI_10025095;
	scaffold241	TRF	Tandem_Repeat	210825	210861	74	+	.	.
scaffold241	subtractBed	intrn	213778	213812	.	+	.	Parent=CGI_10025096;
	scaffold241	TRF	Tandem_Repeat	213778	213812	70	+	.	.
scaffold241	subtractBed	intrn	213919	213955	.	+	.	Parent=CGI_10025096;
	scaffold241	TRF	Tandem_Repeat	213919	213955	65	+	.	.
scaffold241	subtractBed	intrn	226477	226597	.	-	.	Parent=CGI_10025097;
	scaffold241	TRF	Tandem_Repeat	226477	226597	199	+	.	.
scaffold241	subtractBed	intrn	227972	228792	.	-	.	Parent=CGI_10025097;
	scaffold241	TRF	Tandem_Repeat	227972	228792	1036	+	.	.
scaffold241	subtractBed	intrn	230238	230299	.	-	.	Parent=CGI_10025097;
	scaffold241	TRF	Tandem_Repeat	230238	230299	81	+	.	.
scaffold241	subtractBed	intrn	231910	231966	.	-	.	Parent=CGI_10025097;
	scaffold241	TRF	Tandem_Repeat	231910	231966	57	+	.	.
scaffold241	subtractBed	intrn	231896	231975	.	-	.	Parent=CGI_10025097;
	scaffold241	TRF	Tandem_Repeat	231896	231975	51	+	.	.
scaffold241	subtractBed	intrn	392152	392511	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_NOF	392152	392511	119	-	.	.
scaffold241	subtractBed	intrn	391957	392625	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_NOF	391957	392625	91	-	.	.
scaffold241	subtractBed	intrn	393567	393746	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_MuDR	393567	393746	107	-	.	.
scaffold241	subtractBed	intrn	393582	393728	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_NOF	393582	393728	107	-	.	.
scaffold241	subtractBed	intrn	394008	394316	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_NOF	394008	394316	266	-	.	.
scaffold241	subtractBed	intrn	394664	394849	.	-	.	Parent=CGI_10025102;
	scaffold241	WUBlastX	DNA_NOF	394664	394849	49	-	.	.
scaffold241	subtractBed	intrn	395978	397461	.	-	.	Parent=CGI_10025102;
	scaffold241	TRF	Tandem_Repeat	395978	397461	947	+	.	.
scaffold241	subtractBed	intrn	396053	397461	.	-	.	Parent=CGI_10025102;
	scaffold241	TRF	Tandem_Repeat	396053	397461	626	+	.	.
scaffold241	subtractBed	intrn	395940	397546	.	-	.	Parent=CGI_10025102;
	scaffold241	TRF	Tandem_Repeat	395940	397546	1718	+	.	.
scaffold241	subtractBed	intrn	395940	397461	.	-	.	Parent=CGI_10025102;
	scaffold241	TRF	Tandem_Repeat	395940	397461	1715	+	.	.
scaffold241	subtractBed	intrn	513492	513650	.	+	.	Parent=CGI_10025111;
	scaffold241	TRF	Tandem_Repeat	513492	513650	122	+	.	.
scaffold241	subtractBed	intrn	513553	513665	.	+	.	Parent=CGI_10025111;
	scaffold241	TRF	Tandem_Repeat	513553	513665	93	+	.	.
scaffold241	subtractBed	intrn	554228	554364	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	554228	554364	223	+	.	.
scaffold241	subtractBed	intrn	557065	557297	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	557065	557297	385	+	.	.
scaffold241	subtractBed	intrn	558740	558779	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	558740	558779	80	+	.	.
scaffold241	subtractBed	intrn	570712	571005	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	570712	571005	516	+	.	.
scaffold241	subtractBed	intrn	571628	571896	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	571628	571896	270	+	.	.
scaffold241	subtractBed	intrn	571628	571896	.	-	.	Parent=CGI_10025113;
	scaffold241	TRF	Tandem_Repeat	571628	571896	346	+	.	.
scaffold241	subtractBed	intrn	588547	588584	.	-	.	Parent=CGI_10025114;
	scaffold241	TRF	Tandem_Repeat	588547	588584	76	+	.	.
scaffold241	subtractBed	intrn	591437	591975	.	-	.	Parent=CGI_10025114;
	scaffold241	TRF	Tandem_Repeat	591437	591975	228	+	.	.
scaffold241	subtractBed	intrn	591498	591979	.	-	.	Parent=CGI_10025114;
	scaffold241	TRF	Tandem_Repeat	591498	591979	340	+	.	.
scaffold241	subtractBed	intrn	601558	601595	.	-	.	Parent=CGI_10025114;
	scaffold241	TRF	Tandem_Repeat	601558	601595	76	+	.	.
scaffold241	subtractBed	intrn	611745	611790	.	-	.	Parent=CGI_10025114;
	scaffold241	TRF	Tandem_Repeat	611745	611790	92	+	.	.
scaffold241	subtractBed	intrn	676136	676263	.	+	.	Parent=CGI_10025116;
	scaffold241	TRF	Tandem_Repeat	676136	676263	141	+	.	.
scaffold241	subtractBed	intrn	679718	679875	.	+	.	Parent=CGI_10025116;
	scaffold241	TRF	Tandem_Repeat	679718	679875	226	+	.	.
scaffold241	subtractBed	intrn	682499	682629	.	+	.	Parent=CGI_10025116;
	scaffold241	TRF	Tandem_Repeat	682499	682629	262	+	.	.
scaffold241	subtractBed	intrn	683272	683340	.	+	.	Parent=CGI_10025116;
	scaffold241	TRF	Tandem_Repeat	683272	683340	58	+	.	.
scaffold241	subtractBed	intrn	694589	694624	.	+	.	Parent=CGI_10025116;
	scaffold241	TRF	Tandem_Repeat	694589	694624	72	+	.	.
scaffold241	subtractBed	intrn	703744	703792	.	+	.	Parent=CGI_10025117;
	scaffold241	TRF	Tandem_Repeat	703744	703792	98	+	.	.
scaffold241	subtractBed	intrn	716695	716720	.	+	.	Parent=CGI_10025117;
	scaffold241	TRF	Tandem_Repeat	716695	716720	52	+	.	.
scaffold241	subtractBed	intrn	799271	799307	.	-	.	Parent=CGI_10025124;
	scaffold241	TRF	Tandem_Repeat	799271	799307	74	+	.	.
scaffold241	subtractBed	intrn	814493	814525	.	-	.	Parent=CGI_10025126;
	scaffold241	TRF	Tandem_Repeat	814493	814525	59	+	.	.
scaffold241	subtractBed	intrn	830298	831044	.	+	.	Parent=CGI_10025128;
	scaffold241	TRF	Tandem_Repeat	830298	831044	937	+	.	.
scaffold241	subtractBed	intrn	885240	885324	.	-	.	Parent=CGI_10025129;
	scaffold241	TRF	Tandem_Repeat	885240	885324	100	+	.	.
scaffold241	subtractBed	intrn	885240	885302	.	-	.	Parent=CGI_10025129;
	scaffold241	TRF	Tandem_Repeat	885240	885302	108	+	.	.
scaffold241	subtractBed	intrn	912656	912683	.	-	.	Parent=CGI_10025130;
	scaffold241	TRF	Tandem_Repeat	912656	912683	56	+	.	.
scaffold241	subtractBed	intrn	936533	936720	.	+	.	Parent=CGI_10025131;
	scaffold241	TRF	Tandem_Repeat	936533	936720	286	+	.	.
scaffold241	subtractBed	intrn	996378	996441	.	-	.	Parent=CGI_10025135;
	scaffold241	TRF	Tandem_Repeat	996378	996441	128	+	.	.
scaffold241	subtractBed	intrn	1029754	1029792	.	-	.	Parent=CGI_10025136;
	scaffold241	TRF	Tandem_Repeat	1029754	1029792	78	+	.	.
scaffold241	subtractBed	intrn	1032581	1032688	.	-	.	Parent=CGI_10025136;
	scaffold241	TRF	Tandem_Repeat	1032581	1032688	126	+	.	.
scaffold241	subtractBed	intrn	1032687	1032897	.	-	.	Parent=CGI_10025136;
	scaffold241	TRF	Tandem_Repeat	1032687	1032897	178	+	.	.
scaffold241	subtractBed	intrn	1032980	1033065	.	-	.	Parent=CGI_10025136;
	scaffold241	TRF	Tandem_Repeat	1032980	1033065	109	+	.	.
scaffold242	subtractBed	intrn	75958	76443	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	75754	76443	35	+	.	.
scaffold242	subtractBed	intrn	76722	77186	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	76722	77186	194	+	.	.
scaffold242	subtractBed	intrn	76093	76755	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	76093	76755	150	+	.	.
scaffold242	subtractBed	intrn	76737	77306	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	76737	77306	48	+	.	.
scaffold242	subtractBed	intrn	78145	78513	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	78145	78513	237	+	.	.
scaffold242	subtractBed	intrn	75970	76335	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	75970	76335	84	+	.	.
scaffold242	subtractBed	intrn	79099	80460	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	79099	80460	314	+	.	.
scaffold242	subtractBed	intrn	76722	77108	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	76722	77108	203	+	.	.
scaffold242	subtractBed	intrn	79405	80487	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	79405	80487	992	+	.	.
scaffold242	subtractBed	intrn	78512	79093	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	78512	79093	397	+	.	.
scaffold242	subtractBed	intrn	78064	78513	.	+	.	Parent=CGI_10007083;
	scaffold242	WUBlastX	LTR_Pao	78064	78513	64	+	.	.
scaffold242	subtractBed	intrn	121521	121565	.	-	.	Parent=CGI_10007085;
	scaffold242	TRF	Tandem_Repeat	121521	121565	90	+	.	.
scaffold242	subtractBed	intrn	128787	128864	.	+	.	Parent=CGI_10007086;
	scaffold242	WUBlastX	LTR_Gypsy	128787	128966	33	+	.	.
scaffold242	subtractBed	intrn	150987	151164	.	+	.	Parent=CGI_10007087;
	scaffold242	TRF	Tandem_Repeat	150987	151164	230	+	.	.
scaffold242	subtractBed	intrn	164615	165262	.	+	.	Parent=CGI_10007088;
	scaffold242	TRF	Tandem_Repeat	164615	165262	772	+	.	.
scaffold243	subtractBed	intrn	13481	13903	.	-	.	Parent=CGI_10006809;
	scaffold243	WUBlastX	RC_Helitron	13481	13903	384	-	.	.
scaffold243	subtractBed	intrn	16661	16687	.	-	.	Parent=CGI_10006809;
	scaffold243	TRF	Tandem_Repeat	16661	16687	54	+	.	.
scaffold243	subtractBed	intrn	37101	37157	.	-	.	Parent=CGI_10006812;
	scaffold243	TRF	Tandem_Repeat	37101	37157	114	+	.	.
scaffold243	subtractBed	intrn	37101	37157	.	+	.	Parent=CGI_10006813;
	scaffold243	TRF	Tandem_Repeat	37101	37157	114	+	.	.
scaffold243	subtractBed	intrn	43015	43761	.	+	.	Parent=CGI_10006813;
	scaffold243	WUBlastX	DNA_hAT-Tip100	43015	43761	291	+	.	.
scaffold243	subtractBed	intrn	43902	44114	.	+	.	Parent=CGI_10006813;
	scaffold243	WUBlastX	DNA_hAT-Tip100	43902	44114	42	+	.	.
scaffold243	subtractBed	intrn	45771	45776	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	45771	45845	34	-	.	.
scaffold243	subtractBed	intrn	45931	45962	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	45931	46275	159	-	.	.
scaffold243	subtractBed	intrn	45931	45962	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	45931	46206	165	-	.	.
scaffold243	subtractBed	intrn	46617	46618	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	46617	46901	151	-	.	.
scaffold243	subtractBed	intrn	46200	46275	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	45931	46275	159	-	.	.
scaffold243	subtractBed	intrn	46200	46206	.	-	.	Parent=CGI_10006814;
	scaffold243	WUBlastX	DNA_Kolobok	45931	46206	165	-	.	.
scaffold243	subtractBed	intrn	108387	108593	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LINE_RTE-BovB	108387	108593	118	-	.	.
scaffold243	subtractBed	intrn	118838	119242	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy	118838	119242	38	-	.	.
scaffold243	subtractBed	intrn	116919	116960	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy	116919	116960	20	-	.	.
scaffold243	subtractBed	intrn	117568	117699	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy	117568	117699	75	-	.	.
scaffold243	subtractBed	intrn	117674	118318	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy	117674	118318	474	-	.	.
scaffold243	subtractBed	intrn	119476	119765	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy	119476	119916	48	-	.	.
scaffold243	subtractBed	intrn	117632	119119	.	+	.	Parent=CGI_10006817;
	scaffold243	WUBlastX	LTR_Gypsy-Cigr	117632	119119	380	-	.	.
scaffold243	subtractBed	intrn	121564	121590	.	+	.	Parent=CGI_10006817;
	scaffold243	TRF	Tandem_Repeat	121564	121590	54	+	.	.
scaffold247	subtractBed	intrn	59457	59505	.	+	.	Parent=CGI_10018589;
	scaffold247	TRF	Tandem_Repeat	59457	59505	98	+	.	.
scaffold247	subtractBed	intrn	92375	92409	.	-	.	Parent=CGI_10018591;
	scaffold247	TRF	Tandem_Repeat	92375	92409	70	+	.	.
scaffold247	subtractBed	intrn	92790	92828	.	-	.	Parent=CGI_10018591;
	scaffold247	TRF	Tandem_Repeat	92790	92828	71	+	.	.
scaffold247	subtractBed	intrn	93981	94014	.	-	.	Parent=CGI_10018591;
	scaffold247	TRF	Tandem_Repeat	93981	94014	68	+	.	.
scaffold247	subtractBed	intrn	94644	94720	.	-	.	Parent=CGI_10018591;
	scaffold247	TRF	Tandem_Repeat	94644	94720	147	+	.	.
scaffold247	subtractBed	intrn	204630	204800	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	204630	204800	37	-	.	.
scaffold247	subtractBed	intrn	202505	202693	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	202505	202693	36	-	.	.
scaffold247	subtractBed	intrn	202657	202938	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	202657	202938	107	-	.	.
scaffold247	subtractBed	intrn	204681	204884	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	204681	204884	22	-	.	.
scaffold247	subtractBed	intrn	203993	204367	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	203993	204367	57	-	.	.
scaffold247	subtractBed	intrn	203560	203664	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	203560	203664	32	-	.	.
scaffold247	subtractBed	intrn	202935	203150	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	202935	203150	24	-	.	.
scaffold247	subtractBed	intrn	204110	204385	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	204110	204385	69	-	.	.
scaffold247	subtractBed	intrn	203682	203972	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	203682	203972	96	-	.	.
scaffold247	subtractBed	intrn	204567	204740	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	204567	204740	26	-	.	.
scaffold247	subtractBed	intrn	202585	202938	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	202585	202938	46	-	.	.
scaffold247	subtractBed	intrn	203560	203631	.	+	.	Parent=CGI_10018593;
	scaffold247	WUBlastX	LINE_RTE-BovB	203560	203631	32	-	.	.
scaffold247	subtractBed	intrn	330585	331448	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LINE_L1-Tx1	330585	331448	191	-	.	.
scaffold247	subtractBed	intrn	330438	331217	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LINE_L1-Tx1	330438	331217	262	-	.	.
scaffold247	subtractBed	intrn	331255	331491	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LINE_RTE-BovB	331255	331491	37	-	.	.
scaffold247	subtractBed	intrn	329473	330546	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LINE_L1-Tx1	329473	330546	65	-	.	.
scaffold247	subtractBed	intrn	327910	328143	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LTR_DIRS	327910	328143	100	+	.	.
scaffold247	subtractBed	intrn	327904	328095	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LTR_DIRS	327904	328095	119	+	.	.
scaffold247	subtractBed	intrn	326796	327707	.	-	.	Parent=CGI_10018594;
	scaffold247	WUBlastX	LTR_DIRS	326796	327707	267	+	.	.
scaffold247	subtractBed	intrn	454140	454177	.	+	.	Parent=CGI_10018599;
	scaffold247	TRF	Tandem_Repeat	454140	454177	67	+	.	.
scaffold248	subtractBed	intrn	65548	66189	.	-	.	Parent=CGI_10017218;
	scaffold248	TRF	Tandem_Repeat	65548	66189	735	+	.	.
scaffold248	subtractBed	intrn	65548	66189	.	-	.	Parent=CGI_10017218;
	scaffold248	TRF	Tandem_Repeat	65548	66189	748	+	.	.
scaffold248	subtractBed	intrn	75097	75135	.	-	.	Parent=CGI_10017218;
	scaffold248	TRF	Tandem_Repeat	75097	75135	78	+	.	.
scaffold248	subtractBed	intrn	89726	90397	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	89726	90397	216	+	.	.
scaffold248	subtractBed	intrn	89885	90401	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	89885	90401	591	+	.	.
scaffold248	subtractBed	intrn	86227	86535	.	+	.	Parent=CGI_10017220;
	scaffold248	WUBlastX	LTR_Pao	86227	86535	230	-	.	.
scaffold248	subtractBed	intrn	91733	91947	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	91733	91947	394	+	.	.
scaffold248	subtractBed	intrn	96474	97220	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	96474	97220	399	+	.	.
scaffold248	subtractBed	intrn	96466	97200	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	96466	97200	551	+	.	.
scaffold248	subtractBed	intrn	96483	97220	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	96483	97220	493	+	.	.
scaffold248	subtractBed	intrn	101371	101708	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	101345	101708	577	+	.	.
scaffold248	subtractBed	intrn	103065	103260	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	103065	103260	392	+	.	.
scaffold248	subtractBed	intrn	106016	107118	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	106016	107118	1970	+	.	.
scaffold248	subtractBed	intrn	107863	107908	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	107863	107908	58	+	.	.
scaffold248	subtractBed	intrn	108078	109438	.	+	.	Parent=CGI_10017220;
	scaffold248	TRF	Tandem_Repeat	108078	109438	1902	+	.	.
scaffold248	subtractBed	intrn	119165	119261	.	-	.	Parent=CGI_10017221;
	scaffold248	TRF	Tandem_Repeat	119165	119261	88	+	.	.
scaffold248	subtractBed	intrn	119165	119270	.	-	.	Parent=CGI_10017221;
	scaffold248	TRF	Tandem_Repeat	119165	119270	110	+	.	.
scaffold248	subtractBed	intrn	119504	119557	.	-	.	Parent=CGI_10017221;
	scaffold248	TRF	Tandem_Repeat	119504	119557	108	+	.	.
scaffold248	subtractBed	intrn	119611	119642	.	-	.	Parent=CGI_10017221;
	scaffold248	TRF	Tandem_Repeat	119611	119642	64	+	.	.
scaffold248	subtractBed	intrn	120839	120889	.	-	.	Parent=CGI_10017221;
	scaffold248	TRF	Tandem_Repeat	120839	120889	59	+	.	.
scaffold248	subtractBed	intrn	208767	209102	.	+	.	Parent=CGI_10017226;
	scaffold248	TRF	Tandem_Repeat	208767	209102	439	+	.	.
scaffold248	subtractBed	intrn	209267	209508	.	+	.	Parent=CGI_10017226;
	scaffold248	TRF	Tandem_Repeat	209267	209508	226	+	.	.
scaffold248	subtractBed	intrn	217748	218214	.	-	.	Parent=CGI_10017227;
	scaffold248	TRF	Tandem_Repeat	217748	218214	683	+	.	.
scaffold248	subtractBed	intrn	218063	218144	.	-	.	Parent=CGI_10017227;
	scaffold248	TRF	Tandem_Repeat	218063	218144	50	+	.	.
scaffold248	subtractBed	intrn	228430	228601	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	228430	228601	222	+	.	.
scaffold248	subtractBed	intrn	228568	228818	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	228568	228818	94	+	.	.
scaffold248	subtractBed	intrn	228827	229105	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	228827	229105	241	+	.	.
scaffold248	subtractBed	intrn	230157	230684	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	230157	230684	828	+	.	.
scaffold248	subtractBed	intrn	230743	231073	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	230743	231073	113	+	.	.
scaffold248	subtractBed	intrn	231928	231986	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	231928	231986	102	+	.	.
scaffold248	subtractBed	intrn	236127	236177	.	-	.	Parent=CGI_10017228;
	scaffold248	TRF	Tandem_Repeat	236127	236177	102	+	.	.
scaffold248	subtractBed	intrn	243884	244271	.	-	.	Parent=CGI_10017229;
	scaffold248	TRF	Tandem_Repeat	243884	244271	487	+	.	.
scaffold248	subtractBed	intrn	245395	245789	.	-	.	Parent=CGI_10017229;
	scaffold248	TRF	Tandem_Repeat	245395	245789	637	+	.	.
scaffold248	subtractBed	intrn	245395	245791	.	-	.	Parent=CGI_10017229;
	scaffold248	TRF	Tandem_Repeat	245395	245791	731	+	.	.
scaffold248	subtractBed	intrn	295762	295890	.	-	.	Parent=CGI_10017233;
	scaffold248	TRF	Tandem_Repeat	295762	295890	133	+	.	.
scaffold251	subtractBed	intrn	17046	17635	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	17046	17635	593	+	.	.
scaffold251	subtractBed	intrn	17040	17640	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	17040	17640	1022	+	.	.
scaffold251	subtractBed	intrn	17191	17640	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	17191	17640	555	+	.	.
scaffold251	subtractBed	intrn	19606	19789	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	19606	19789	247	+	.	.
scaffold251	subtractBed	intrn	19606	19789	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	19606	19798	195	+	.	.
scaffold251	subtractBed	intrn	21025	21099	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	21025	21099	150	+	.	.
scaffold251	subtractBed	intrn	21874	22152	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	21874	22152	352	+	.	.
scaffold251	subtractBed	intrn	21874	22152	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	21874	22152	343	+	.	.
scaffold251	subtractBed	intrn	29422	29718	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	29422	29718	452	+	.	.
scaffold251	subtractBed	intrn	34485	34647	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	34485	34647	96	+	.	.
scaffold251	subtractBed	intrn	34577	34722	.	-	.	Parent=CGI_10005216;
	scaffold251	TRF	Tandem_Repeat	34577	34722	123	+	.	.
scaffold251	subtractBed	intrn	38592	39527	.	-	.	Parent=CGI_10005216;
	scaffold251	WUBlastX	LTR_DIRS	38592	39527	403	+	.	.
scaffold251	subtractBed	intrn	37075	38733	.	-	.	Parent=CGI_10005216;
	scaffold251	WUBlastX	LTR_DIRS	37075	38733	964	+	.	.
scaffold251	subtractBed	intrn	29422	29718	.	+	.	Parent=CGI_10005217;
	scaffold251	TRF	Tandem_Repeat	29422	29718	452	+	.	.
scaffold251	subtractBed	intrn	34485	34647	.	+	.	Parent=CGI_10005217;
	scaffold251	TRF	Tandem_Repeat	34485	34647	96	+	.	.
scaffold251	subtractBed	intrn	34577	34722	.	+	.	Parent=CGI_10005217;
	scaffold251	TRF	Tandem_Repeat	34577	34722	123	+	.	.
scaffold251	subtractBed	intrn	38592	39527	.	+	.	Parent=CGI_10005217;
	scaffold251	WUBlastX	LTR_DIRS	38592	39527	403	+	.	.
scaffold251	subtractBed	intrn	37075	38733	.	+	.	Parent=CGI_10005217;
	scaffold251	WUBlastX	LTR_DIRS	37075	38733	964	+	.	.
scaffold251	subtractBed	intrn	46005	46138	.	-	.	Parent=CGI_10005218;
	scaffold251	TRF	Tandem_Repeat	46005	46138	162	+	.	.
scaffold251	subtractBed	intrn	47711	47801	.	-	.	Parent=CGI_10005218;
	scaffold251	TRF	Tandem_Repeat	47711	47801	94	+	.	.
scaffold251	subtractBed	intrn	71860	71916	.	-	.	Parent=CGI_10005220;
	scaffold251	TRF	Tandem_Repeat	71860	71916	51	+	.	.
scaffold251	subtractBed	intrn	83821	83856	.	-	.	Parent=CGI_10005221;
	scaffold251	TRF	Tandem_Repeat	83821	83856	54	+	.	.
scaffold251	subtractBed	intrn	83830	83869	.	-	.	Parent=CGI_10005221;
	scaffold251	TRF	Tandem_Repeat	83830	83869	53	+	.	.
scaffold251	subtractBed	intrn	83821	83869	.	-	.	Parent=CGI_10005221;
	scaffold251	TRF	Tandem_Repeat	83821	83869	62	+	.	.
scaffold252	subtractBed	intrn	633	1208	.	-	.	Parent=CGI_10010757;
	scaffold252	TRF	Tandem_Repeat	633	1208	981	+	.	.
scaffold252	subtractBed	intrn	29041	29222	.	-	.	Parent=CGI_10010758;
	scaffold252	TRF	Tandem_Repeat	29041	29222	337	+	.	.
scaffold252	subtractBed	intrn	33578	34105	.	-	.	Parent=CGI_10010758;
	scaffold252	TRF	Tandem_Repeat	33578	34105	713	+	.	.
scaffold252	subtractBed	intrn	73099	73240	.	+	.	Parent=CGI_10010759;
	scaffold252	TRF	Tandem_Repeat	73099	73240	176	+	.	.
scaffold252	subtractBed	intrn	92011	92078	.	+	.	Parent=CGI_10010762;
	scaffold252	TRF	Tandem_Repeat	92011	92078	68	+	.	.
scaffold252	subtractBed	intrn	92942	92965	.	+	.	Parent=CGI_10010762;
	scaffold252	WUBlastX	DNA_MuDR	92735	92965	33	-	.	.
scaffold252	subtractBed	intrn	93123	93467	.	+	.	Parent=CGI_10010762;
	scaffold252	WUBlastX	DNA_MuDR	93123	93467	101	-	.	.
scaffold252	subtractBed	intrn	93225	93524	.	+	.	Parent=CGI_10010762;
	scaffold252	WUBlastX	DNA_MuDR	93225	93524	56	-	.	.
scaffold252	subtractBed	intrn	106392	106418	.	-	.	Parent=CGI_10010764;
	scaffold252	TRF	Tandem_Repeat	106392	106418	54	+	.	.
scaffold252	subtractBed	intrn	194729	194890	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1	194729	194890	66	+	.	.
scaffold252	subtractBed	intrn	195000	195257	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1-Tx1	195000	195257	75	+	.	.
scaffold252	subtractBed	intrn	194395	194766	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1-Tx1	194395	194766	93	+	.	.
scaffold252	subtractBed	intrn	196213	196467	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1-Tx1	196213	196467	43	+	.	.
scaffold252	subtractBed	intrn	194729	195025	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1-Tx1	194729	195025	62	+	.	.
scaffold252	subtractBed	intrn	196962	197007	.	-	.	Parent=CGI_10010768;
	scaffold252	TRF	Tandem_Repeat	196962	197007	92	+	.	.
scaffold252	subtractBed	intrn	196469	196741	.	-	.	Parent=CGI_10010768;
	scaffold252	WUBlastX	LINE_L1-Tx1	196469	196741	44	+	.	.
scaffold252	subtractBed	intrn	271644	271751	.	+	.	Parent=CGI_10010771;
	scaffold252	WUBlastX	LINE_L1-Tx1	271644	271751	42	-	.	.
scaffold252	subtractBed	intrn	271892	272023	.	+	.	Parent=CGI_10010771;
	scaffold252	WUBlastX	LINE_L1-Tx1	271892	272023	28	-	.	.
scaffold253	subtractBed	intrn	3342	3881	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LTR_Gypsy	3342	3881	91	-	.	.
scaffold253	subtractBed	intrn	2582	2698	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LTR_Gypsy	2582	2698	20	-	.	.
scaffold253	subtractBed	intrn	2602	2844	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LTR_Gypsy	2602	2844	71	-	.	.
scaffold253	subtractBed	intrn	2653	3465	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LTR_Gypsy	2653	3465	118	-	.	.
scaffold253	subtractBed	intrn	3489	3971	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LTR_Gypsy	3489	3971	20	-	.	.
scaffold253	subtractBed	intrn	9308	9682	.	+	.	Parent=CGI_10003487;
	scaffold253	WUBlastX	LINE_L2	9308	9682	97	-	.	.
scaffold257	subtractBed	intrn	8778	8872	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	8778	8872	57	+	.	.
scaffold257	subtractBed	intrn	8778	8827	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	8778	8827	64	+	.	.
scaffold257	subtractBed	intrn	9049	9084	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	9049	9084	54	+	.	.
scaffold257	subtractBed	intrn	9041	9085	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	9041	9085	60	+	.	.
scaffold257	subtractBed	intrn	19318	19360	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	19318	19360	52	+	.	.
scaffold257	subtractBed	intrn	19631	19663	.	-	.	Parent=CGI_10027873;
	scaffold257	TRF	Tandem_Repeat	19631	19663	59	+	.	.
scaffold257	subtractBed	intrn	85544	85791	.	+	.	Parent=CGI_10027879;
	scaffold257	TRF	Tandem_Repeat	85544	85791	444	+	.	.
scaffold257	subtractBed	intrn	93418	93506	.	+	.	Parent=CGI_10027879;
	scaffold257	TRF	Tandem_Repeat	93418	93506	178	+	.	.
scaffold257	subtractBed	intrn	110196	110253	.	+	.	Parent=CGI_10027881;
	scaffold257	TRF	Tandem_Repeat	110196	110253	116	+	.	.
scaffold257	subtractBed	intrn	127377	127532	.	+	.	Parent=CGI_10027883;
	scaffold257	TRF	Tandem_Repeat	127370	127532	116	+	.	.
scaffold257	subtractBed	intrn	128597	128634	.	+	.	Parent=CGI_10027883;
	scaffold257	TRF	Tandem_Repeat	128597	128634	51	+	.	.
scaffold257	subtractBed	intrn	128804	129653	.	+	.	Parent=CGI_10027883;
	scaffold257	TRF	Tandem_Repeat	128804	129653	1529	+	.	.
scaffold257	subtractBed	intrn	147815	147863	.	+	.	Parent=CGI_10027885;
	scaffold257	TRF	Tandem_Repeat	147815	147863	98	+	.	.
scaffold257	subtractBed	intrn	158205	158878	.	+	.	Parent=CGI_10027887;
	scaffold257	TRF	Tandem_Repeat	158205	158878	891	+	.	.
scaffold257	subtractBed	intrn	174899	174935	.	+	.	Parent=CGI_10027891;
	scaffold257	TRF	Tandem_Repeat	174899	174935	74	+	.	.
scaffold257	subtractBed	intrn	185428	185486	.	+	.	Parent=CGI_10027892;
	scaffold257	TRF	Tandem_Repeat	185428	185486	118	+	.	.
scaffold257	subtractBed	intrn	189679	189734	.	+	.	Parent=CGI_10027893;
	scaffold257	TRF	Tandem_Repeat	189679	189734	112	+	.	.
scaffold257	subtractBed	intrn	196310	196361	.	+	.	Parent=CGI_10027893;
	scaffold257	TRF	Tandem_Repeat	196310	196361	104	+	.	.
scaffold257	subtractBed	intrn	235767	235896	.	-	.	Parent=CGI_10027898;
	scaffold257	TRF	Tandem_Repeat	235767	235896	107	+	.	.
scaffold257	subtractBed	intrn	237026	237057	.	-	.	Parent=CGI_10027898;
	scaffold257	TRF	Tandem_Repeat	237026	237057	64	+	.	.
scaffold257	subtractBed	intrn	311521	312660	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_Penelope	311521	312660	114	-	.	.
scaffold257	subtractBed	intrn	319829	319942	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	319829	319942	73	+	.	.
scaffold257	subtractBed	intrn	318027	318239	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	318027	318239	34	+	.	.
scaffold257	subtractBed	intrn	319741	319836	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	319741	319836	25	+	.	.
scaffold257	subtractBed	intrn	319829	319987	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	319829	319987	34	+	.	.
scaffold257	subtractBed	intrn	319759	319830	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	319759	319830	40	+	.	.
scaffold257	subtractBed	intrn	318188	318502	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	318188	318502	145	+	.	.
scaffold257	subtractBed	intrn	318558	319394	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_RTE-X	318558	319394	52	+	.	.
scaffold257	subtractBed	intrn	317511	317990	.	+	.	Parent=CGI_10027906;
	scaffold257	WUBlastX	LINE_L1	317511	317990	149	+	.	.
scaffold257	subtractBed	intrn	387043	387097	.	+	.	Parent=CGI_10027908;
	scaffold257	TRF	Tandem_Repeat	387043	387097	85	+	.	.
scaffold257	subtractBed	intrn	392553	392670	.	+	.	Parent=CGI_10027908;
	scaffold257	TRF	Tandem_Repeat	392549	392670	208	+	.	.
scaffold257	subtractBed	intrn	393736	393766	.	+	.	Parent=CGI_10027908;
	scaffold257	TRF	Tandem_Repeat	393736	393766	53	+	.	.
scaffold257	subtractBed	intrn	404505	404705	.	-	.	Parent=CGI_10027909;
	scaffold257	TRF	Tandem_Repeat	404505	404705	348	+	.	.
scaffold257	subtractBed	intrn	418827	418888	.	-	.	Parent=CGI_10027910;
	scaffold257	TRF	Tandem_Repeat	418827	418888	81	+	.	.
scaffold257	subtractBed	intrn	428896	429039	.	-	.	Parent=CGI_10027910;
	scaffold257	WUBlastX	LTR_Gypsy	428896	429039	26	-	.	.
scaffold257	subtractBed	intrn	426908	428587	.	-	.	Parent=CGI_10027910;
	scaffold257	WUBlastX	LTR_DIRS	426908	428587	996	-	.	.
scaffold257	subtractBed	intrn	426563	428605	.	-	.	Parent=CGI_10027910;
	scaffold257	WUBlastX	LTR_DIRS	426563	428605	808	-	.	.
scaffold257	subtractBed	intrn	425745	426668	.	-	.	Parent=CGI_10027910;
	scaffold257	WUBlastX	LTR_DIRS	425745	426668	355	-	.	.
scaffold257	subtractBed	intrn	418827	418888	.	+	.	Parent=CGI_10027911;
	scaffold257	TRF	Tandem_Repeat	418827	418888	81	+	.	.
scaffold257	subtractBed	intrn	428896	429039	.	+	.	Parent=CGI_10027911;
	scaffold257	WUBlastX	LTR_Gypsy	428896	429039	26	-	.	.
scaffold257	subtractBed	intrn	426908	428587	.	+	.	Parent=CGI_10027911;
	scaffold257	WUBlastX	LTR_DIRS	426908	428587	996	-	.	.
scaffold257	subtractBed	intrn	426563	428605	.	+	.	Parent=CGI_10027911;
	scaffold257	WUBlastX	LTR_DIRS	426563	428605	808	-	.	.
scaffold257	subtractBed	intrn	425745	426668	.	+	.	Parent=CGI_10027911;
	scaffold257	WUBlastX	LTR_DIRS	425745	426668	355	-	.	.
scaffold257	subtractBed	intrn	470667	470694	.	+	.	Parent=CGI_10027915;
	scaffold257	TRF	Tandem_Repeat	470667	470694	56	+	.	.
scaffold257	subtractBed	intrn	541589	541628	.	+	.	Parent=CGI_10027922;
	scaffold257	TRF	Tandem_Repeat	541589	541628	62	+	.	.
scaffold257	subtractBed	intrn	541798	542689	.	+	.	Parent=CGI_10027922;
	scaffold257	TRF	Tandem_Repeat	541798	542689	864	+	.	.
scaffold257	subtractBed	intrn	566714	566765	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	566714	566765	104	+	.	.
scaffold257	subtractBed	intrn	572831	573062	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	572831	573062	225	+	.	.
scaffold257	subtractBed	intrn	572831	573062	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	572831	573062	232	+	.	.
scaffold257	subtractBed	intrn	573486	573677	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	573486	573677	79	+	.	.
scaffold257	subtractBed	intrn	581717	581756	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	581717	581756	80	+	.	.
scaffold257	subtractBed	intrn	582080	582387	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	582080	582387	351	+	.	.
scaffold257	subtractBed	intrn	582080	582387	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	582080	582387	425	+	.	.
scaffold257	subtractBed	intrn	582080	582387	.	+	.	Parent=CGI_10027924;
	scaffold257	TRF	Tandem_Repeat	582080	582387	441	+	.	.
scaffold257	subtractBed	intrn	615085	615148	.	+	.	Parent=CGI_10027925;
	scaffold257	TRF	Tandem_Repeat	615085	615148	83	+	.	.
scaffold257	subtractBed	intrn	722978	723316	.	+	.	Parent=CGI_10027927;
	scaffold257	TRF	Tandem_Repeat	722978	723316	425	+	.	.
scaffold257	subtractBed	intrn	738356	738403	.	+	.	Parent=CGI_10027928;
	scaffold257	TRF	Tandem_Repeat	738356	738403	96	+	.	.
scaffold257	subtractBed	intrn	790426	790490	.	+	.	Parent=CGI_10027931;
	scaffold257	TRF	Tandem_Repeat	790426	790490	130	+	.	.
scaffold257	subtractBed	intrn	829487	829712	.	+	.	Parent=CGI_10027934;
	scaffold257	TRF	Tandem_Repeat	829487	829712	177	+	.	.
scaffold257	subtractBed	intrn	870856	871030	.	-	.	Parent=CGI_10027936;
	scaffold257	TRF	Tandem_Repeat	870856	871030	314	+	.	.
scaffold257	subtractBed	intrn	1004784	1004829	.	-	.	Parent=CGI_10027939;
	scaffold257	TRF	Tandem_Repeat	1004784	1004829	76	+	.	.
scaffold257	subtractBed	intrn	1019721	1019810	.	-	.	Parent=CGI_10027939;
	scaffold257	TRF	Tandem_Repeat	1019721	1019810	108	+	.	.
scaffold257	subtractBed	intrn	1095030	1095104	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy-Cigr	1095030	1095104	25	-	.	.
scaffold257	subtractBed	intrn	1094933	1095085	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1094933	1095085	50	-	.	.
scaffold257	subtractBed	intrn	1095115	1097229	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1095115	1097229	1527	-	.	.
scaffold257	subtractBed	intrn	1094420	1094485	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1094420	1094485	21	-	.	.
scaffold257	subtractBed	intrn	1094723	1094959	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Copia	1094723	1094959	59	-	.	.
scaffold257	subtractBed	intrn	1097829	1098452	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1097829	1098452	44	-	.	.
scaffold257	subtractBed	intrn	1098261	1098950	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy-Cigr	1098261	1098950	144	-	.	.
scaffold257	subtractBed	intrn	1098111	1098782	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1098111	1098782	150	-	.	.
scaffold257	subtractBed	intrn	1097994	1098239	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Copia	1097994	1098239	61	-	.	.
scaffold257	subtractBed	intrn	1097629	1097850	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1097629	1097850	53	-	.	.
scaffold257	subtractBed	intrn	1095115	1097784	.	-	.	Parent=CGI_10027941;
	scaffold257	WUBlastX	LTR_Gypsy	1095115	1097784	1400	-	.	.
scaffold257	subtractBed	intrn	1306931	1306965	.	+	.	Parent=CGI_10027947;
	scaffold257	TRF	Tandem_Repeat	1306931	1306965	54	+	.	.
scaffold257	subtractBed	intrn	1309075	1309125	.	+	.	Parent=CGI_10027947;
	scaffold257	TRF	Tandem_Repeat	1309075	1309125	70	+	.	.
scaffold257	subtractBed	intrn	1309466	1309512	.	+	.	Parent=CGI_10027947;
	scaffold257	TRF	Tandem_Repeat	1309466	1309512	78	+	.	.
scaffold257	subtractBed	intrn	1310161	1311175	.	+	.	Parent=CGI_10027947;
	scaffold257	TRF	Tandem_Repeat	1310161	1311175	969	+	.	.
scaffold257	subtractBed	intrn	1355690	1355755	.	-	.	Parent=CGI_10027950;
	scaffold257	TRF	Tandem_Repeat	1355690	1355755	132	+	.	.
scaffold257	subtractBed	intrn	1362876	1363114	.	-	.	Parent=CGI_10027950;
	scaffold257	TRF	Tandem_Repeat	1362876	1363114	361	+	.	.
scaffold257	subtractBed	intrn	1365043	1365085	.	-	.	Parent=CGI_10027950;
	scaffold257	TRF	Tandem_Repeat	1365043	1365085	86	+	.	.
scaffold257	subtractBed	intrn	1367413	1367442	.	-	.	Parent=CGI_10027950;
	scaffold257	TRF	Tandem_Repeat	1367413	1367442	60	+	.	.
scaffold257	subtractBed	intrn	1369038	1369204	.	-	.	Parent=CGI_10027950;
	scaffold257	TRF	Tandem_Repeat	1369038	1369204	124	+	.	.
scaffold257	subtractBed	intrn	1394727	1395982	.	+	.	Parent=CGI_10027951;
	scaffold257	TRF	Tandem_Repeat	1394727	1395982	1698	+	.	.
scaffold257	subtractBed	intrn	1412568	1412605	.	+	.	Parent=CGI_10027952;
	scaffold257	TRF	Tandem_Repeat	1412568	1412605	76	+	.	.
scaffold257	subtractBed	intrn	1422850	1422979	.	-	.	Parent=CGI_10027953;
	scaffold257	TRF	Tandem_Repeat	1422850	1422979	242	+	.	.
scaffold257	subtractBed	intrn	1440913	1440963	.	-	.	Parent=CGI_10027954;
	scaffold257	TRF	Tandem_Repeat	1440913	1440963	93	+	.	.
scaffold257	subtractBed	intrn	1604480	1604971	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1604480	1604971	38	+	.	.
scaffold257	subtractBed	intrn	1600286	1600366	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	DNA_TcMar-Marin	1600286	1600366	64	+	.	.
scaffold257	subtractBed	intrn	1605399	1605533	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1605399	1605533	36	+	.	.
scaffold257	subtractBed	intrn	1599791	1599871	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	DNA_TcMar-Marin	1599791	1599871	23	+	.	.
scaffold257	subtractBed	intrn	1604995	1605258	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1604995	1605258	77	+	.	.
scaffold257	subtractBed	intrn	1604992	1605198	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1604992	1605198	88	+	.	.
scaffold257	subtractBed	intrn	1600109	1600189	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	DNA_TcMar-Marin	1600109	1600189	22	+	.	.
scaffold257	subtractBed	intrn	1600280	1600438	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	DNA_TcMar-Marin	1600280	1600438	62	+	.	.
scaffold257	subtractBed	intrn	1606452	1606601	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_Gypsy	1606452	1606601	35	+	.	.
scaffold257	subtractBed	intrn	1605860	1606288	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1605860	1606288	204	+	.	.
scaffold257	subtractBed	intrn	1606221	1606532	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1606221	1606532	112	+	.	.
scaffold257	subtractBed	intrn	1607694	1607756	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1607694	1607756	30	+	.	.
scaffold257	subtractBed	intrn	1607767	1608075	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1607767	1608075	77	+	.	.
scaffold257	subtractBed	intrn	1607670	1607789	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1607670	1607789	23	+	.	.
scaffold257	subtractBed	intrn	1607764	1607997	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1607764	1607997	96	+	.	.
scaffold257	subtractBed	intrn	1608074	1608730	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1608074	1608946	208	+	.	.
scaffold257	subtractBed	intrn	1606452	1606646	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_Gypsy	1606452	1606646	31	+	.	.
scaffold257	subtractBed	intrn	1605445	1605858	.	+	.	Parent=CGI_10027962;
	scaffold257	WUBlastX	LTR_DIRS	1605445	1605858	179	+	.	.
scaffold258	subtractBed	intrn	15603	15646	.	+	.	Parent=CGI_10020036;
	scaffold258	TRF	Tandem_Repeat	15603	15646	79	+	.	.
scaffold258	subtractBed	intrn	41217	41265	.	-	.	Parent=CGI_10020038;
	scaffold258	TRF	Tandem_Repeat	41217	41265	89	+	.	.
scaffold258	subtractBed	intrn	41536	41592	.	-	.	Parent=CGI_10020038;
	scaffold258	TRF	Tandem_Repeat	41536	41592	105	+	.	.
scaffold258	subtractBed	intrn	98007	98055	.	+	.	Parent=CGI_10020040;
	scaffold258	TRF	Tandem_Repeat	98007	98055	98	+	.	.
scaffold258	subtractBed	intrn	98643	98845	.	+	.	Parent=CGI_10020040;
	scaffold258	TRF	Tandem_Repeat	98643	98845	256	+	.	.
scaffold258	subtractBed	intrn	119654	119685	.	+	.	Parent=CGI_10020042;
	scaffold258	TRF	Tandem_Repeat	119654	119685	64	+	.	.
scaffold258	subtractBed	intrn	119685	119721	.	+	.	Parent=CGI_10020042;
	scaffold258	TRF	Tandem_Repeat	119685	119721	65	+	.	.
scaffold258	subtractBed	intrn	127050	127079	.	+	.	Parent=CGI_10020042;
	scaffold258	TRF	Tandem_Repeat	127050	127079	60	+	.	.
scaffold258	subtractBed	intrn	146246	146288	.	-	.	Parent=CGI_10020044;
	scaffold258	TRF	Tandem_Repeat	146246	146288	86	+	.	.
scaffold258	subtractBed	intrn	147702	148169	.	-	.	Parent=CGI_10020044;
	scaffold258	WUBlastX	LTR_Gypsy	147702	148169	20	-	.	.
scaffold258	subtractBed	intrn	154867	154968	.	-	.	Parent=CGI_10020045;
	scaffold258	WUBlastX	LTR_Gypsy	154867	154968	35	-	.	.
scaffold258	subtractBed	intrn	184562	184629	.	+	.	Parent=CGI_10020048;
	scaffold258	TRF	Tandem_Repeat	184562	184629	136	+	.	.
scaffold258	subtractBed	intrn	200542	200722	.	+	.	Parent=CGI_10020049;
	scaffold258	TRF	Tandem_Repeat	200542	200722	265	+	.	.
scaffold258	subtractBed	intrn	208742	208799	.	-	.	Parent=CGI_10020050;
	scaffold258	TRF	Tandem_Repeat	208742	208799	107	+	.	.
scaffold258	subtractBed	intrn	225745	225784	.	-	.	Parent=CGI_10020050;
	scaffold258	TRF	Tandem_Repeat	225745	225784	80	+	.	.
scaffold258	subtractBed	intrn	230551	230608	.	-	.	Parent=CGI_10020050;
	scaffold258	TRF	Tandem_Repeat	230551	230608	116	+	.	.
scaffold258	subtractBed	intrn	233960	233998	.	-	.	Parent=CGI_10020050;
	scaffold258	TRF	Tandem_Repeat	233960	233998	78	+	.	.
scaffold258	subtractBed	intrn	248367	248431	.	-	.	Parent=CGI_10020051;
	scaffold258	TRF	Tandem_Repeat	248367	248431	130	+	.	.
scaffold258	subtractBed	intrn	249854	249901	.	-	.	Parent=CGI_10020051;
	scaffold258	TRF	Tandem_Repeat	249854	249901	96	+	.	.
scaffold258	subtractBed	intrn	250081	250128	.	-	.	Parent=CGI_10020051;
	scaffold258	TRF	Tandem_Repeat	250081	250128	80	+	.	.
scaffold258	subtractBed	intrn	254066	254962	.	+	.	Parent=CGI_10020052;
	scaffold258	TRF	Tandem_Repeat	254066	254962	1355	+	.	.
scaffold258	subtractBed	intrn	257980	258112	.	+	.	Parent=CGI_10020052;
	scaffold258	TRF	Tandem_Repeat	257980	258112	160	+	.	.
scaffold258	subtractBed	intrn	258169	258282	.	+	.	Parent=CGI_10020052;
	scaffold258	TRF	Tandem_Repeat	258169	258282	138	+	.	.
scaffold258	subtractBed	intrn	264798	264937	.	+	.	Parent=CGI_10020052;
	scaffold258	TRF	Tandem_Repeat	264798	264937	235	+	.	.
scaffold258	subtractBed	intrn	318282	318827	.	+	.	Parent=CGI_10020057;
	scaffold258	WUBlastX	LINE_CR1-L2	318282	318827	75	+	.	.
scaffold258	subtractBed	intrn	318282	318710	.	+	.	Parent=CGI_10020057;
	scaffold258	WUBlastX	LINE_CR1	318282	318710	263	+	.	.
scaffold258	subtractBed	intrn	330446	330736	.	+	.	Parent=CGI_10020058;
	scaffold258	TRF	Tandem_Repeat	330446	330736	203	+	.	.
scaffold258	subtractBed	intrn	330446	330721	.	+	.	Parent=CGI_10020058;
	scaffold258	TRF	Tandem_Repeat	330446	330721	252	+	.	.
scaffold258	subtractBed	intrn	331300	331392	.	+	.	Parent=CGI_10020058;
	scaffold258	TRF	Tandem_Repeat	331300	331392	89	+	.	.
scaffold258	subtractBed	intrn	404843	404990	.	-	.	Parent=CGI_10020063;
	scaffold258	TRF	Tandem_Repeat	404843	404990	122	+	.	.
scaffold258	subtractBed	intrn	447894	447927	.	+	.	Parent=CGI_10020066;
	scaffold258	TRF	Tandem_Repeat	447894	447927	68	+	.	.
scaffold258	subtractBed	intrn	450485	450522	.	+	.	Parent=CGI_10020067;
	scaffold258	TRF	Tandem_Repeat	450485	450522	51	+	.	.
scaffold258	subtractBed	intrn	453286	453351	.	+	.	Parent=CGI_10020067;
	scaffold258	TRF	Tandem_Repeat	453286	453351	132	+	.	.
scaffold258	subtractBed	intrn	456300	456992	.	+	.	Parent=CGI_10020067;
	scaffold258	TRF	Tandem_Repeat	456300	457027	913	+	.	.
scaffold258	subtractBed	intrn	456523	456992	.	+	.	Parent=CGI_10020067;
	scaffold258	TRF	Tandem_Repeat	456523	457027	617	+	.	.
scaffold258	subtractBed	intrn	457743	457794	.	+	.	Parent=CGI_10020067;
	scaffold258	TRF	Tandem_Repeat	457743	457794	104	+	.	.
scaffold258	subtractBed	intrn	487471	487509	.	+	.	Parent=CGI_10020069;
	scaffold258	TRF	Tandem_Repeat	487471	487509	78	+	.	.
scaffold258	subtractBed	intrn	508463	508522	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	508463	508522	120	+	.	.
scaffold258	subtractBed	intrn	508544	508599	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	508544	508599	89	+	.	.
scaffold258	subtractBed	intrn	508722	508772	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	508722	508772	57	+	.	.
scaffold258	subtractBed	intrn	510669	510715	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	510669	510715	60	+	.	.
scaffold258	subtractBed	intrn	510670	510754	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	510670	510754	52	+	.	.
scaffold258	subtractBed	intrn	510668	510755	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	510668	510755	74	+	.	.
scaffold258	subtractBed	intrn	513737	514704	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	513737	514704	1073	+	.	.
scaffold258	subtractBed	intrn	514998	515088	.	+	.	Parent=CGI_10020071;
	scaffold258	TRF	Tandem_Repeat	514998	515088	119	+	.	.
scaffold258	subtractBed	intrn	540348	540421	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	540348	540421	130	+	.	.
scaffold258	subtractBed	intrn	547172	547224	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	547172	547224	106	+	.	.
scaffold258	subtractBed	intrn	554496	554770	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	554496	554770	433	+	.	.
scaffold258	subtractBed	intrn	555516	555602	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	555516	555602	167	+	.	.
scaffold258	subtractBed	intrn	560635	560669	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	560635	560669	61	+	.	.
scaffold258	subtractBed	intrn	563287	563314	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	563287	563314	56	+	.	.
scaffold258	subtractBed	intrn	563321	564055	.	+	.	Parent=CGI_10020074;
	scaffold258	TRF	Tandem_Repeat	563321	564055	1180	+	.	.
scaffold26	subtractBed	intrn	11916	12037	.	+	.	Parent=CGI_10002294;
	scaffold26	TRF	Tandem_Repeat	11903	12037	218	+	.	.
scaffold26	subtractBed	intrn	38370	38705	.	+	.	Parent=CGI_10002298;
	scaffold26	WUBlastX	LTR_Gypsy	38370	38705	150	-	.	.
scaffold26	subtractBed	intrn	38442	38723	.	+	.	Parent=CGI_10002298;
	scaffold26	WUBlastX	LTR_Gypsy	38442	38723	279	-	.	.
scaffold26	subtractBed	intrn	38484	38774	.	+	.	Parent=CGI_10002298;
	scaffold26	WUBlastX	LTR_Gypsy	38484	38774	67	-	.	.
scaffold260	subtractBed	intrn	48994	49308	.	-	.	Parent=CGI_10003729;
	scaffold260	WUBlastX	DNA_Crypton	48994	49308	105	-	.	.
scaffold260	subtractBed	intrn	57148	57195	.	-	.	Parent=CGI_10003729;
	scaffold260	TRF	Tandem_Repeat	57148	57195	71	+	.	.
scaffold260	subtractBed	intrn	62732	62884	.	-	.	Parent=CGI_10003729;
	scaffold260	WUBlastX	LINE_L2	62732	62884	76	+	.	.
scaffold260	subtractBed	intrn	62759	62887	.	-	.	Parent=CGI_10003729;
	scaffold260	WUBlastX	LINE_L2	62759	62887	101	+	.	.
scaffold260	subtractBed	intrn	62702	62884	.	-	.	Parent=CGI_10003729;
	scaffold260	WUBlastX	LINE_L2	62702	62884	56	+	.	.
scaffold260	subtractBed	intrn	62597	62866	.	-	.	Parent=CGI_10003729;
	scaffold260	WUBlastX	LINE_L2	62597	62866	24	+	.	.
scaffold264	subtractBed	intrn	63882	64430	.	+	.	Parent=CGI_10003463;
	scaffold264	WUBlastX	LTR_Gypsy-Cigr	63882	64430	303	+	.	.
scaffold264	subtractBed	intrn	63714	64409	.	+	.	Parent=CGI_10003463;
	scaffold264	WUBlastX	LTR_Gypsy	63714	64409	225	+	.	.
scaffold264	subtractBed	intrn	63160	63261	.	+	.	Parent=CGI_10003463;
	scaffold264	WUBlastX	LTR_Gypsy	63160	63261	23	+	.	.
scaffold264	subtractBed	intrn	63606	64226	.	+	.	Parent=CGI_10003463;
	scaffold264	WUBlastX	LTR_ERV1	63606	64226	74	+	.	.
scaffold265	subtractBed	intrn	71751	71792	.	-	.	Parent=CGI_10003429;
	scaffold265	TRF	Tandem_Repeat	71751	71792	84	+	.	.
scaffold265	subtractBed	intrn	68521	69009	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	68521	69009	321	-	.	.
scaffold265	subtractBed	intrn	69374	70069	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	69374	70069	143	-	.	.
scaffold265	subtractBed	intrn	69374	69778	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	69374	69778	151	-	.	.
scaffold265	subtractBed	intrn	68524	69108	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	68524	69108	164	-	.	.
scaffold265	subtractBed	intrn	66239	67180	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	66239	67180	336	-	.	.
scaffold265	subtractBed	intrn	67147	68214	.	-	.	Parent=CGI_10003429;
	scaffold265	WUBlastX	LTR_Ngaro	67147	68214	648	-	.	.
scaffold266	subtractBed	intrn	9308	9339	.	-	.	Parent=CGI_10013345;
	scaffold266	WUBlastX	DNA_hAT	8800	9339	62	-	.	.
scaffold266	subtractBed	intrn	54621	54842	.	-	.	Parent=CGI_10013346;
	scaffold266	WUBlastX	DNA_hAT-Tip100	54621	54842	132	+	.	.
scaffold266	subtractBed	intrn	54669	54896	.	-	.	Parent=CGI_10013346;
	scaffold266	WUBlastX	DNA_hAT-Tip100	54669	54896	51	+	.	.
scaffold266	subtractBed	intrn	100696	101668	.	+	.	Parent=CGI_10013348;
	scaffold266	TRF	Tandem_Repeat	100696	101668	770	+	.	.
scaffold266	subtractBed	intrn	100702	101733	.	+	.	Parent=CGI_10013348;
	scaffold266	TRF	Tandem_Repeat	100702	101733	1049	+	.	.
scaffold266	subtractBed	intrn	100702	101733	.	+	.	Parent=CGI_10013348;
	scaffold266	TRF	Tandem_Repeat	100702	101733	899	+	.	.
scaffold266	subtractBed	intrn	111396	113416	.	-	.	Parent=CGI_10013349;
	scaffold266	TRF	Tandem_Repeat	111396	113416	3205	+	.	.
scaffold266	subtractBed	intrn	115085	115387	.	-	.	Parent=CGI_10013349;
	scaffold266	TRF	Tandem_Repeat	115085	115387	219	+	.	.
scaffold266	subtractBed	intrn	115055	115386	.	-	.	Parent=CGI_10013349;
	scaffold266	TRF	Tandem_Repeat	115055	115386	258	+	.	.
scaffold266	subtractBed	intrn	138635	138972	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	138635	138972	642	+	.	.
scaffold266	subtractBed	intrn	139387	139505	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	139387	139505	91	+	.	.
scaffold266	subtractBed	intrn	139548	139670	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	139548	139670	124	+	.	.
scaffold266	subtractBed	intrn	140740	140903	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	140740	140903	265	+	.	.
scaffold266	subtractBed	intrn	144194	144669	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	144194	144669	404	+	.	.
scaffold266	subtractBed	intrn	146278	146317	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	146278	146317	62	+	.	.
scaffold266	subtractBed	intrn	146804	146855	.	+	.	Parent=CGI_10013350;
	scaffold266	TRF	Tandem_Repeat	146804	146855	50	+	.	.
scaffold266	subtractBed	intrn	237494	237533	.	-	.	Parent=CGI_10013355;
	scaffold266	TRF	Tandem_Repeat	237494	237533	80	+	.	.
scaffold266	subtractBed	intrn	240616	240650	.	-	.	Parent=CGI_10013355;
	scaffold266	TRF	Tandem_Repeat	240616	240650	70	+	.	.
scaffold266	subtractBed	intrn	245952	246284	.	-	.	Parent=CGI_10013355;
	scaffold266	WUBlastX	LINE_RTE-X	245952	246284	96	-	.	.
scaffold266	subtractBed	intrn	245955	246347	.	-	.	Parent=CGI_10013355;
	scaffold266	WUBlastX	LINE_RTE-X	245955	246347	84	-	.	.
scaffold266	subtractBed	intrn	246066	246425	.	-	.	Parent=CGI_10013355;
	scaffold266	WUBlastX	LINE_RTE-X	246066	246425	37	-	.	.
scaffold267	subtractBed	intrn	5631	5678	.	-	.	Parent=CGI_10018282;
	scaffold267	TRF	Tandem_Repeat	5631	5678	96	+	.	.
scaffold267	subtractBed	intrn	66121	66162	.	-	.	Parent=CGI_10018283;
	scaffold267	TRF	Tandem_Repeat	66121	66162	84	+	.	.
scaffold267	subtractBed	intrn	84171	84207	.	-	.	Parent=CGI_10018284;
	scaffold267	TRF	Tandem_Repeat	84171	84207	74	+	.	.
scaffold267	subtractBed	intrn	90670	90708	.	-	.	Parent=CGI_10018285;
	scaffold267	TRF	Tandem_Repeat	90670	90708	60	+	.	.
scaffold267	subtractBed	intrn	94552	94836	.	-	.	Parent=CGI_10018285;
	scaffold267	WUBlastX	DNA_Harbinger	94552	94836	26	+	.	.
scaffold267	subtractBed	intrn	93781	94764	.	-	.	Parent=CGI_10018285;
	scaffold267	WUBlastX	DNA_Harbinger	93781	94764	336	+	.	.
scaffold267	subtractBed	intrn	111018	111061	.	-	.	Parent=CGI_10018289;
	scaffold267	TRF	Tandem_Repeat	111018	111061	61	+	.	.
scaffold267	subtractBed	intrn	111018	111070	.	-	.	Parent=CGI_10018289;
	scaffold267	TRF	Tandem_Repeat	111018	111070	70	+	.	.
scaffold267	subtractBed	intrn	111718	111900	.	-	.	Parent=CGI_10018289;
	scaffold267	WUBlastX	DNA_Maverick	111718	112086	77	-	.	.
scaffold267	subtractBed	intrn	161791	162304	.	-	.	Parent=CGI_10018297;
	scaffold267	TRF	Tandem_Repeat	161791	162304	534	+	.	.
scaffold267	subtractBed	intrn	263328	264531	.	+	.	Parent=CGI_10018301;
	scaffold267	TRF	Tandem_Repeat	263328	264531	1765	+	.	.
scaffold267	subtractBed	intrn	263328	264531	.	-	.	Parent=CGI_10018302;
	scaffold267	TRF	Tandem_Repeat	263328	264531	1765	+	.	.
scaffold267	subtractBed	intrn	272679	273840	.	-	.	Parent=CGI_10018302;
	scaffold267	TRF	Tandem_Repeat	272679	273840	1567	+	.	.
scaffold267	subtractBed	intrn	280136	280277	.	-	.	Parent=CGI_10018302;
	scaffold267	TRF	Tandem_Repeat	280136	280277	266	+	.	.
scaffold267	subtractBed	intrn	283874	285441	.	+	.	Parent=CGI_10018303;
	scaffold267	TRF	Tandem_Repeat	283874	285441	1857	+	.	.
scaffold267	subtractBed	intrn	283874	285441	.	-	.	Parent=CGI_10018304;
	scaffold267	TRF	Tandem_Repeat	283874	285441	1857	+	.	.
scaffold267	subtractBed	intrn	370195	370309	.	+	.	Parent=CGI_10018307;
	scaffold267	TRF	Tandem_Repeat	370195	370309	90	+	.	.
scaffold267	subtractBed	intrn	367315	368316	.	+	.	Parent=CGI_10018307;
	scaffold267	WUBlastX	DNA_TcMar-Tc1	367315	368316	598	+	.	.
scaffold267	subtractBed	intrn	367282	367413	.	+	.	Parent=CGI_10018307;
	scaffold267	WUBlastX	DNA_TcMar-Marin	367282	367413	20	+	.	.
scaffold267	subtractBed	intrn	394386	394440	.	-	.	Parent=CGI_10018309;
	scaffold267	TRF	Tandem_Repeat	394386	394440	110	+	.	.
scaffold267	subtractBed	intrn	400683	400778	.	+	.	Parent=CGI_10018310;
	scaffold267	TRF	Tandem_Repeat	400683	400778	93	+	.	.
scaffold267	subtractBed	intrn	400684	400782	.	+	.	Parent=CGI_10018310;
	scaffold267	TRF	Tandem_Repeat	400684	400782	108	+	.	.
scaffold267	subtractBed	intrn	400696	400785	.	+	.	Parent=CGI_10018310;
	scaffold267	TRF	Tandem_Repeat	400696	400785	99	+	.	.
scaffold267	subtractBed	intrn	400809	401603	.	+	.	Parent=CGI_10018310;
	scaffold267	TRF	Tandem_Repeat	400809	401603	1213	+	.	.
scaffold267	subtractBed	intrn	422438	422479	.	+	.	Parent=CGI_10018311;
	scaffold267	TRF	Tandem_Repeat	422438	422479	84	+	.	.
scaffold267	subtractBed	intrn	423530	423567	.	+	.	Parent=CGI_10018311;
	scaffold267	TRF	Tandem_Repeat	423530	423567	76	+	.	.
scaffold267	subtractBed	intrn	447005	447062	.	+	.	Parent=CGI_10018312;
	scaffold267	TRF	Tandem_Repeat	447005	447062	82	+	.	.
scaffold267	subtractBed	intrn	457795	457844	.	+	.	Parent=CGI_10018312;
	scaffold267	TRF	Tandem_Repeat	457795	457844	100	+	.	.
scaffold267	subtractBed	intrn	492589	492604	.	+	.	Parent=CGI_10018313;
	scaffold267	WUBlastX	DNA_Kolobok	492428	492604	75	+	.	.
scaffold267	subtractBed	intrn	492708	492724	.	+	.	Parent=CGI_10018313;
	scaffold267	WUBlastX	DNA_Kolobok	492708	492878	91	+	.	.
scaffold267	subtractBed	intrn	492589	492589	.	+	.	Parent=CGI_10018313;
	scaffold267	WUBlastX	DNA_Kolobok	492389	492589	59	+	.	.
scaffold267	subtractBed	intrn	493426	493478	.	-	.	Parent=CGI_10018314;
	scaffold267	WUBlastX	DNA_Kolobok	493287	493478	84	-	.	.
scaffold267	subtractBed	intrn	493426	493439	.	-	.	Parent=CGI_10018314;
	scaffold267	WUBlastX	DNA_Kolobok	493296	493439	87	-	.	.
scaffold268	subtractBed	intrn	18703	18839	.	-	.	Parent=CGI_10005546;
	scaffold268	TRF	Tandem_Repeat	18703	18839	140	+	.	.
scaffold268	subtractBed	intrn	19496	19688	.	-	.	Parent=CGI_10005546;
	scaffold268	TRF	Tandem_Repeat	19496	19688	194	+	.	.
scaffold268	subtractBed	intrn	20539	20799	.	-	.	Parent=CGI_10005546;
	scaffold268	TRF	Tandem_Repeat	20539	20799	450	+	.	.
scaffold269	subtractBed	intrn	31211	31262	.	+	.	Parent=CGI_10018984;
	scaffold269	TRF	Tandem_Repeat	31211	31262	104	+	.	.
scaffold269	subtractBed	intrn	32259	32293	.	+	.	Parent=CGI_10018984;
	scaffold269	TRF	Tandem_Repeat	32259	32293	70	+	.	.
scaffold269	subtractBed	intrn	36429	37526	.	+	.	Parent=CGI_10018984;
	scaffold269	TRF	Tandem_Repeat	36429	37526	1601	+	.	.
scaffold269	subtractBed	intrn	62901	62930	.	-	.	Parent=CGI_10018985;
	scaffold269	TRF	Tandem_Repeat	62901	62930	51	+	.	.
scaffold269	subtractBed	intrn	63456	63506	.	-	.	Parent=CGI_10018985;
	scaffold269	TRF	Tandem_Repeat	63456	63506	102	+	.	.
scaffold269	subtractBed	intrn	70283	70784	.	-	.	Parent=CGI_10018986;
	scaffold269	TRF	Tandem_Repeat	70283	70784	491	+	.	.
scaffold269	subtractBed	intrn	91900	91994	.	-	.	Parent=CGI_10018988;
	scaffold269	TRF	Tandem_Repeat	91900	91994	118	+	.	.
scaffold269	subtractBed	intrn	92043	92141	.	-	.	Parent=CGI_10018988;
	scaffold269	TRF	Tandem_Repeat	92043	92141	182	+	.	.
scaffold269	subtractBed	intrn	99259	99336	.	-	.	Parent=CGI_10018989;
	scaffold269	TRF	Tandem_Repeat	99259	99349	173	+	.	.
scaffold269	subtractBed	intrn	102829	102905	.	-	.	Parent=CGI_10018989;
	scaffold269	TRF	Tandem_Repeat	102829	102905	154	+	.	.
scaffold269	subtractBed	intrn	110697	110730	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	110697	110730	59	+	.	.
scaffold269	subtractBed	intrn	111608	111659	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	111608	111659	104	+	.	.
scaffold269	subtractBed	intrn	117385	117467	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	117385	117467	139	+	.	.
scaffold269	subtractBed	intrn	120078	120131	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	120078	120131	74	+	.	.
scaffold269	subtractBed	intrn	121355	123931	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	121355	123931	2551	+	.	.
scaffold269	subtractBed	intrn	130781	130850	.	+	.	Parent=CGI_10018990;
	scaffold269	TRF	Tandem_Repeat	130781	130850	51	+	.	.
scaffold269	subtractBed	intrn	187379	187422	.	+	.	Parent=CGI_10018995;
	scaffold269	TRF	Tandem_Repeat	187379	187422	88	+	.	.
scaffold269	subtractBed	intrn	199268	199366	.	+	.	Parent=CGI_10018996;
	scaffold269	WUBlastX	LTR_Ngaro	199268	199366	59	-	.	.
scaffold269	subtractBed	intrn	197738	198148	.	+	.	Parent=CGI_10018996;
	scaffold269	WUBlastX	LINE_CR1	197738	198148	81	-	.	.
scaffold269	subtractBed	intrn	197780	198103	.	+	.	Parent=CGI_10018996;
	scaffold269	WUBlastX	LINE_RTE-X	197780	198103	96	-	.	.
scaffold269	subtractBed	intrn	198354	199337	.	+	.	Parent=CGI_10018996;
	scaffold269	WUBlastX	LTR_Ngaro	198354	199337	466	-	.	.
scaffold269	subtractBed	intrn	261378	261479	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	261378	261479	100	+	.	.
scaffold269	subtractBed	intrn	264287	264311	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	264287	264311	50	+	.	.
scaffold269	subtractBed	intrn	264525	265340	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	264525	265340	811	+	.	.
scaffold269	subtractBed	intrn	264525	265340	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	264525	265340	882	+	.	.
scaffold269	subtractBed	intrn	264905	265340	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	264905	265340	604	+	.	.
scaffold269	subtractBed	intrn	272565	272600	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	272565	272600	54	+	.	.
scaffold269	subtractBed	intrn	285262	285417	.	-	.	Parent=CGI_10018997;
	scaffold269	TRF	Tandem_Repeat	285262	285417	118	+	.	.
scaffold269	subtractBed	intrn	292783	292822	.	-	.	Parent=CGI_10018998;
	scaffold269	TRF	Tandem_Repeat	292783	292822	80	+	.	.
scaffold269	subtractBed	intrn	352513	352547	.	-	.	Parent=CGI_10019002;
	scaffold269	TRF	Tandem_Repeat	352513	352547	70	+	.	.
scaffold269	subtractBed	intrn	370286	370357	.	-	.	Parent=CGI_10019002;
	scaffold269	TRF	Tandem_Repeat	370286	370357	128	+	.	.
scaffold269	subtractBed	intrn	373399	373426	.	-	.	Parent=CGI_10019002;
	scaffold269	TRF	Tandem_Repeat	373399	373426	56	+	.	.
scaffold269	subtractBed	intrn	426455	426515	.	-	.	Parent=CGI_10019005;
	scaffold269	TRF	Tandem_Repeat	426455	426515	122	+	.	.
scaffold269	subtractBed	intrn	438456	438499	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	438456	438499	61	+	.	.
scaffold269	subtractBed	intrn	445728	445767	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	445728	445767	73	+	.	.
scaffold269	subtractBed	intrn	447797	447842	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	447797	447842	92	+	.	.
scaffold269	subtractBed	intrn	454533	454660	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	454533	454660	64	+	.	.
scaffold269	subtractBed	intrn	454531	454663	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	454531	454663	53	+	.	.
scaffold269	subtractBed	intrn	454573	454663	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	454573	454663	60	+	.	.
scaffold269	subtractBed	intrn	454531	454661	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	454531	454661	59	+	.	.
scaffold269	subtractBed	intrn	458128	458166	.	-	.	Parent=CGI_10019006;
	scaffold269	TRF	Tandem_Repeat	458128	458166	78	+	.	.
scaffold269	subtractBed	intrn	456031	456510	.	-	.	Parent=CGI_10019006;
	scaffold269	WUBlastX	LINE_RTE-X	456031	456510	71	+	.	.
scaffold269	subtractBed	intrn	455669	455890	.	-	.	Parent=CGI_10019006;
	scaffold269	WUBlastX	LINE_RTE-X	455669	455890	132	+	.	.
scaffold269	subtractBed	intrn	455924	456049	.	-	.	Parent=CGI_10019006;
	scaffold269	WUBlastX	LINE_RTE-X	455924	456049	81	-	.	.
scaffold269	subtractBed	intrn	455977	456306	.	-	.	Parent=CGI_10019006;
	scaffold269	WUBlastX	LINE_RTE-X	455977	456306	82	+	.	.
scaffold269	subtractBed	intrn	456067	456309	.	-	.	Parent=CGI_10019006;
	scaffold269	WUBlastX	LINE_RTE-X	456067	456309	110	+	.	.
scaffold269	subtractBed	intrn	551799	552355	.	-	.	Parent=CGI_10019009;
	scaffold269	TRF	Tandem_Repeat	551799	552355	347	+	.	.
scaffold269	subtractBed	intrn	551792	552355	.	-	.	Parent=CGI_10019009;
	scaffold269	TRF	Tandem_Repeat	551792	552355	805	+	.	.
scaffold269	subtractBed	intrn	551792	552355	.	-	.	Parent=CGI_10019009;
	scaffold269	TRF	Tandem_Repeat	551792	552355	805	+	.	.
scaffold269	subtractBed	intrn	555833	555877	.	-	.	Parent=CGI_10019009;
	scaffold269	TRF	Tandem_Repeat	555833	555877	90	+	.	.
scaffold269	subtractBed	intrn	561328	561388	.	-	.	Parent=CGI_10019009;
	scaffold269	TRF	Tandem_Repeat	561328	561388	81	+	.	.
scaffold27	subtractBed	intrn	11465	11515	.	+	.	Parent=CGI_10003285;
	scaffold27	TRF	Tandem_Repeat	11465	11515	102	+	.	.
scaffold27	subtractBed	intrn	15246	15480	.	+	.	Parent=CGI_10003285;
	scaffold27	TRF	Tandem_Repeat	15246	15480	191	+	.	.
scaffold270	subtractBed	intrn	3174	3560	.	+	.	Parent=CGI_10005003;
	scaffold270	TRF	Tandem_Repeat	3174	3560	546	+	.	.
scaffold271	subtractBed	intrn	168520	168549	.	-	.	Parent=CGI_10024459;
	scaffold271	TRF	Tandem_Repeat	168520	168549	60	+	.	.
scaffold271	subtractBed	intrn	189223	189841	.	-	.	Parent=CGI_10024460;
	scaffold271	WUBlastX	DNA_Academ	189203	189841	23	-	.	.
scaffold271	subtractBed	intrn	189223	189589	.	-	.	Parent=CGI_10024460;
	scaffold271	WUBlastX	DNA_Academ	189203	189589	55	-	.	.
scaffold271	subtractBed	intrn	189770	189880	.	-	.	Parent=CGI_10024460;
	scaffold271	WUBlastX	DNA_Academ	189770	189880	23	-	.	.
scaffold271	subtractBed	intrn	201616	202695	.	-	.	Parent=CGI_10024460;
	scaffold271	WUBlastX	LINE_L2	201616	202695	686	+	.	.
scaffold271	subtractBed	intrn	201391	202701	.	-	.	Parent=CGI_10024460;
	scaffold271	WUBlastX	LINE_L2	201391	202701	89	+	.	.
scaffold271	subtractBed	intrn	206995	207037	.	-	.	Parent=CGI_10024460;
	scaffold271	TRF	Tandem_Repeat	206995	207037	86	+	.	.
scaffold271	subtractBed	intrn	209205	209238	.	-	.	Parent=CGI_10024460;
	scaffold271	TRF	Tandem_Repeat	209205	209238	68	+	.	.
scaffold271	subtractBed	intrn	212264	212354	.	-	.	Parent=CGI_10024460;
	scaffold271	TRF	Tandem_Repeat	212264	212354	146	+	.	.
scaffold271	subtractBed	intrn	278923	278974	.	-	.	Parent=CGI_10024465;
	scaffold271	TRF	Tandem_Repeat	278923	278974	79	+	.	.
scaffold271	subtractBed	intrn	278314	278596	.	-	.	Parent=CGI_10024465;
	scaffold271	TRF	Tandem_Repeat	278314	278596	332	+	.	.
scaffold271	subtractBed	intrn	307846	308228	.	-	.	Parent=CGI_10024469;
	scaffold271	TRF	Tandem_Repeat	307846	308228	658	+	.	.
scaffold271	subtractBed	intrn	317605	318419	.	-	.	Parent=CGI_10024469;
	scaffold271	TRF	Tandem_Repeat	317605	318419	638	+	.	.
scaffold271	subtractBed	intrn	317928	318419	.	-	.	Parent=CGI_10024469;
	scaffold271	TRF	Tandem_Repeat	317928	318419	551	+	.	.
scaffold271	subtractBed	intrn	366787	367122	.	+	.	Parent=CGI_10024471;
	scaffold271	WUBlastX	DNA_MuDR	366787	367122	23	+	.	.
scaffold271	subtractBed	intrn	377003	377274	.	-	.	Parent=CGI_10024472;
	scaffold271	TRF	Tandem_Repeat	377003	377274	212	+	.	.
scaffold271	subtractBed	intrn	377003	377274	.	-	.	Parent=CGI_10024472;
	scaffold271	TRF	Tandem_Repeat	377003	377274	256	+	.	.
scaffold271	subtractBed	intrn	386758	387009	.	-	.	Parent=CGI_10024473;
	scaffold271	TRF	Tandem_Repeat	386758	387009	263	+	.	.
scaffold271	subtractBed	intrn	386758	387009	.	-	.	Parent=CGI_10024473;
	scaffold271	TRF	Tandem_Repeat	386758	387009	307	+	.	.
scaffold271	subtractBed	intrn	442791	443105	.	+	.	Parent=CGI_10024478;
	scaffold271	TRF	Tandem_Repeat	442791	443105	402	+	.	.
scaffold271	subtractBed	intrn	442791	443102	.	+	.	Parent=CGI_10024478;
	scaffold271	TRF	Tandem_Repeat	442791	443102	390	+	.	.
scaffold271	subtractBed	intrn	448436	448742	.	+	.	Parent=CGI_10024478;
	scaffold271	TRF	Tandem_Repeat	448417	448742	492	+	.	.
scaffold271	subtractBed	intrn	470900	471244	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	470900	471244	28	-	.	.
scaffold271	subtractBed	intrn	469515	469586	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1	469515	469586	28	-	.	.
scaffold271	subtractBed	intrn	470542	470874	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	470542	470874	43	-	.	.
scaffold271	subtractBed	intrn	471244	471480	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	471244	471480	27	-	.	.
scaffold271	subtractBed	intrn	469276	469476	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	469276	469476	20	-	.	.
scaffold271	subtractBed	intrn	470981	471250	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1	470981	471250	29	-	.	.
scaffold271	subtractBed	intrn	470374	470874	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1	470374	470874	35	-	.	.
scaffold271	subtractBed	intrn	469491	469562	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	469491	469562	20	-	.	.
scaffold271	subtractBed	intrn	470602	470874	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	470602	470874	65	-	.	.
scaffold271	subtractBed	intrn	471253	471414	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	471253	471414	54	-	.	.
scaffold271	subtractBed	intrn	471220	471414	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L1-Tx1	471220	471414	47	-	.	.
scaffold271	subtractBed	intrn	473819	473950	.	+	.	Parent=CGI_10024481;
	scaffold271	TRF	Tandem_Repeat	473819	473950	95	+	.	.
scaffold271	subtractBed	intrn	476155	476328	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_CR1-L2	476155	476328	70	+	.	.
scaffold271	subtractBed	intrn	476253	476999	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L2	476253	476999	228	+	.	.
scaffold271	subtractBed	intrn	477537	477842	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_CR1-L2	477537	477842	31	+	.	.
scaffold271	subtractBed	intrn	476421	476987	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_CR1-L2	476421	476987	403	+	.	.
scaffold271	subtractBed	intrn	477516	477794	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_CR1-L2	477516	477794	106	+	.	.
scaffold271	subtractBed	intrn	476956	477714	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_CR1-L2	476956	477714	273	+	.	.
scaffold271	subtractBed	intrn	475704	476147	.	+	.	Parent=CGI_10024481;
	scaffold271	WUBlastX	LINE_L2	475704	476147	70	+	.	.
scaffold271	subtractBed	intrn	553767	553857	.	-	.	Parent=CGI_10024486;
	scaffold271	TRF	Tandem_Repeat	553767	553857	173	+	.	.
scaffold271	subtractBed	intrn	560041	560147	.	-	.	Parent=CGI_10024486;
	scaffold271	TRF	Tandem_Repeat	560041	560147	126	+	.	.
scaffold271	subtractBed	intrn	565935	566672	.	-	.	Parent=CGI_10024486;
	scaffold271	TRF	Tandem_Repeat	565935	566672	1236	+	.	.
scaffold271	subtractBed	intrn	654514	654551	.	-	.	Parent=CGI_10024493;
	scaffold271	TRF	Tandem_Repeat	654514	654551	58	+	.	.
scaffold271	subtractBed	intrn	654506	654560	.	-	.	Parent=CGI_10024493;
	scaffold271	TRF	Tandem_Repeat	654506	654560	76	+	.	.
scaffold271	subtractBed	intrn	680798	680866	.	+	.	Parent=CGI_10024494;
	scaffold271	TRF	Tandem_Repeat	680798	680866	59	+	.	.
scaffold271	subtractBed	intrn	810316	810397	.	-	.	Parent=CGI_10024500;
	scaffold271	TRF	Tandem_Repeat	810316	810397	67	+	.	.
scaffold271	subtractBed	intrn	810360	810421	.	-	.	Parent=CGI_10024500;
	scaffold271	TRF	Tandem_Repeat	810360	810421	88	+	.	.
scaffold271	subtractBed	intrn	811135	811227	.	-	.	Parent=CGI_10024500;
	scaffold271	TRF	Tandem_Repeat	811135	811227	107	+	.	.
scaffold271	subtractBed	intrn	825357	825392	.	-	.	Parent=CGI_10024500;
	scaffold271	TRF	Tandem_Repeat	825357	825392	63	+	.	.
scaffold271	subtractBed	intrn	831686	832177	.	-	.	Parent=CGI_10024500;
	scaffold271	WUBlastX	LINE_RTE-X	831686	832177	183	-	.	.
scaffold271	subtractBed	intrn	830367	830684	.	-	.	Parent=CGI_10024500;
	scaffold271	WUBlastX	DNA_Harbinger	830367	830684	98	-	.	.
scaffold271	subtractBed	intrn	832126	832254	.	-	.	Parent=CGI_10024500;
	scaffold271	WUBlastX	LINE_RTE-X	832126	832254	25	-	.	.
scaffold271	subtractBed	intrn	848105	848226	.	-	.	Parent=CGI_10024500;
	scaffold271	TRF	Tandem_Repeat	848105	848226	70	+	.	.
scaffold271	subtractBed	intrn	842746	842949	.	-	.	Parent=CGI_10024500;
	scaffold271	WUBlastX	DNA_Zator	842746	842949	76	-	.	.
scaffold271	subtractBed	intrn	848105	848226	.	+	.	Parent=CGI_10024501;
	scaffold271	TRF	Tandem_Repeat	848105	848226	70	+	.	.
scaffold271	subtractBed	intrn	842746	842949	.	+	.	Parent=CGI_10024501;
	scaffold271	WUBlastX	DNA_Zator	842746	842949	76	-	.	.
scaffold272	subtractBed	intrn	37468	37510	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	37468	37510	86	+	.	.
scaffold272	subtractBed	intrn	38540	38570	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	38540	38570	62	+	.	.
scaffold272	subtractBed	intrn	38818	38905	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	38818	38905	158	+	.	.
scaffold272	subtractBed	intrn	48426	48482	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	48426	48482	114	+	.	.
scaffold272	subtractBed	intrn	48867	48917	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	48867	48917	57	+	.	.
scaffold272	subtractBed	intrn	46182	46340	.	+	.	Parent=CGI_10003057;
	scaffold272	WUBlastX	LINE_CR1-L2	46182	46340	37	+	.	.
scaffold272	subtractBed	intrn	45847	46089	.	+	.	Parent=CGI_10003057;
	scaffold272	WUBlastX	LINE_L2	45847	46089	72	+	.	.
scaffold272	subtractBed	intrn	45326	45781	.	+	.	Parent=CGI_10003057;
	scaffold272	WUBlastX	LINE_L2	45326	45781	157	+	.	.
scaffold272	subtractBed	intrn	45158	45787	.	+	.	Parent=CGI_10003057;
	scaffold272	WUBlastX	LINE_L2	45158	45787	91	+	.	.
scaffold272	subtractBed	intrn	45446	46153	.	+	.	Parent=CGI_10003057;
	scaffold272	WUBlastX	LINE_L2	45446	46153	58	+	.	.
scaffold272	subtractBed	intrn	61106	61174	.	+	.	Parent=CGI_10003057;
	scaffold272	TRF	Tandem_Repeat	61106	61174	138	+	.	.
scaffold273	subtractBed	intrn	108657	108692	.	-	.	Parent=CGI_10006605;
	scaffold273	TRF	Tandem_Repeat	108657	108692	63	+	.	.
scaffold273	subtractBed	intrn	108740	108831	.	-	.	Parent=CGI_10006605;
	scaffold273	TRF	Tandem_Repeat	108740	108831	150	+	.	.
scaffold273	subtractBed	intrn	113784	113946	.	-	.	Parent=CGI_10006605;
	scaffold273	TRF	Tandem_Repeat	113784	113946	210	+	.	.
scaffold273	subtractBed	intrn	145415	145649	.	-	.	Parent=CGI_10006606;
	scaffold273	TRF	Tandem_Repeat	145415	145649	195	+	.	.
scaffold273	subtractBed	intrn	146163	146547	.	-	.	Parent=CGI_10006606;
	scaffold273	TRF	Tandem_Repeat	146163	146547	646	+	.	.
scaffold273	subtractBed	intrn	148698	148787	.	-	.	Parent=CGI_10006606;
	scaffold273	TRF	Tandem_Repeat	148698	148787	137	+	.	.
scaffold274	subtractBed	intrn	34097	34417	.	+	.	Parent=CGI_10017008;
	scaffold274	WUBlastX	LINE_Penelope	34097	34417	89	-	.	.
scaffold274	subtractBed	intrn	34001	34348	.	+	.	Parent=CGI_10017008;
	scaffold274	WUBlastX	LINE_Penelope	34001	34348	84	-	.	.
scaffold274	subtractBed	intrn	34133	34504	.	+	.	Parent=CGI_10017008;
	scaffold274	WUBlastX	LINE_Penelope	34133	34504	68	-	.	.
scaffold274	subtractBed	intrn	34079	34354	.	+	.	Parent=CGI_10017008;
	scaffold274	WUBlastX	LINE_Penelope	34079	34354	92	-	.	.
scaffold274	subtractBed	intrn	47572	48198	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	LINE_L2	47572	48198	143	+	.	.
scaffold274	subtractBed	intrn	47803	48192	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	LINE_L1	47803	48192	197	+	.	.
scaffold274	subtractBed	intrn	54349	54378	.	-	.	Parent=CGI_10017009;
	scaffold274	TRF	Tandem_Repeat	54349	54378	60	+	.	.
scaffold274	subtractBed	intrn	52024	53325	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	DNA_En-Spm	52024	53325	199	-	.	.
scaffold274	subtractBed	intrn	53113	54228	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	DNA_En-Spm	53113	54228	302	-	.	.
scaffold274	subtractBed	intrn	52447	53223	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	DNA_En-Spm	52447	53223	238	-	.	.
scaffold274	subtractBed	intrn	53929	54348	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	DNA_En-Spm	53929	54348	25	-	.	.
scaffold274	subtractBed	intrn	52618	53469	.	-	.	Parent=CGI_10017009;
	scaffold274	WUBlastX	DNA_En-Spm	52618	53469	295	-	.	.
scaffold274	subtractBed	intrn	66506	66595	.	-	.	Parent=CGI_10017009;
	scaffold274	TRF	Tandem_Repeat	66506	66595	171	+	.	.
scaffold274	subtractBed	intrn	71034	71078	.	+	.	Parent=CGI_10017011;
	scaffold274	TRF	Tandem_Repeat	71034	71078	81	+	.	.
scaffold274	subtractBed	intrn	71034	71081	.	+	.	Parent=CGI_10017011;
	scaffold274	TRF	Tandem_Repeat	71034	71081	60	+	.	.
scaffold274	subtractBed	intrn	120495	121184	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120495	121184	130	-	.	.
scaffold274	subtractBed	intrn	120699	121142	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120699	121142	284	-	.	.
scaffold274	subtractBed	intrn	121484	122536	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	121484	122536	546	-	.	.
scaffold274	subtractBed	intrn	120699	121241	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120699	121241	268	-	.	.
scaffold274	subtractBed	intrn	120481	120570	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120481	120570	44	-	.	.
scaffold274	subtractBed	intrn	120615	121142	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120615	121142	199	-	.	.
scaffold274	subtractBed	intrn	121189	121455	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	121189	121455	198	-	.	.
scaffold274	subtractBed	intrn	120427	120612	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Gypsy	120427	120612	33	-	.	.
scaffold274	subtractBed	intrn	125067	125454	.	+	.	Parent=CGI_10017013;
	scaffold274	TRF	Tandem_Repeat	125067	125454	275	+	.	.
scaffold274	subtractBed	intrn	136010	136702	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Copia	136010	136702	150	+	.	.
scaffold274	subtractBed	intrn	135725	136540	.	+	.	Parent=CGI_10017013;
	scaffold274	WUBlastX	LTR_Copia	135725	136540	417	+	.	.
scaffold274	subtractBed	intrn	120495	121184	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120495	121184	130	-	.	.
scaffold274	subtractBed	intrn	120699	121142	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120699	121142	284	-	.	.
scaffold274	subtractBed	intrn	121484	122536	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	121484	122536	546	-	.	.
scaffold274	subtractBed	intrn	120699	121241	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120699	121241	268	-	.	.
scaffold274	subtractBed	intrn	120481	120570	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120481	120570	44	-	.	.
scaffold274	subtractBed	intrn	120615	121142	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120615	121142	199	-	.	.
scaffold274	subtractBed	intrn	121189	121455	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	121189	121455	198	-	.	.
scaffold274	subtractBed	intrn	120427	120612	.	-	.	Parent=CGI_10017014;
	scaffold274	WUBlastX	LTR_Gypsy	120427	120612	33	-	.	.
scaffold274	subtractBed	intrn	125067	125454	.	-	.	Parent=CGI_10017014;
	scaffold274	TRF	Tandem_Repeat	125067	125454	275	+	.	.
scaffold274	subtractBed	intrn	172987	173051	.	-	.	Parent=CGI_10017018;
	scaffold274	TRF	Tandem_Repeat	172987	173051	130	+	.	.
scaffold274	subtractBed	intrn	202766	202804	.	-	.	Parent=CGI_10017019;
	scaffold274	TRF	Tandem_Repeat	202766	202804	78	+	.	.
scaffold274	subtractBed	intrn	209807	209867	.	+	.	Parent=CGI_10017021;
	scaffold274	TRF	Tandem_Repeat	209807	209867	122	+	.	.
scaffold274	subtractBed	intrn	237395	237481	.	+	.	Parent=CGI_10017024;
	scaffold274	TRF	Tandem_Repeat	237395	237481	95	+	.	.
scaffold274	subtractBed	intrn	237565	237723	.	+	.	Parent=CGI_10017024;
	scaffold274	TRF	Tandem_Repeat	237565	237723	210	+	.	.
scaffold274	subtractBed	intrn	237791	237889	.	+	.	Parent=CGI_10017024;
	scaffold274	TRF	Tandem_Repeat	237791	237889	101	+	.	.
scaffold274	subtractBed	intrn	268717	268750	.	-	.	Parent=CGI_10017030;
	scaffold274	TRF	Tandem_Repeat	268717	268750	68	+	.	.
scaffold274	subtractBed	intrn	277454	277491	.	-	.	Parent=CGI_10017030;
	scaffold274	TRF	Tandem_Repeat	277454	277491	60	+	.	.
scaffold274	subtractBed	intrn	328824	328907	.	-	.	Parent=CGI_10017033;
	scaffold274	TRF	Tandem_Repeat	328824	328907	134	+	.	.
scaffold274	subtractBed	intrn	461222	461267	.	-	.	Parent=CGI_10017036;
	scaffold274	TRF	Tandem_Repeat	461222	461267	58	+	.	.
scaffold274	subtractBed	intrn	461306	461355	.	-	.	Parent=CGI_10017036;
	scaffold274	TRF	Tandem_Repeat	461306	461355	55	+	.	.
scaffold274	subtractBed	intrn	470071	470179	.	-	.	Parent=CGI_10017037;
	scaffold274	TRF	Tandem_Repeat	470071	470179	200	+	.	.
scaffold274	subtractBed	intrn	471750	471811	.	-	.	Parent=CGI_10017037;
	scaffold274	TRF	Tandem_Repeat	471750	471811	115	+	.	.
scaffold274	subtractBed	intrn	473807	473918	.	-	.	Parent=CGI_10017037;
	scaffold274	TRF	Tandem_Repeat	473807	473918	170	+	.	.
scaffold275	subtractBed	intrn	56605	56698	.	+	.	Parent=CGI_10006824;
	scaffold275	TRF	Tandem_Repeat	56605	56698	118	+	.	.
scaffold275	subtractBed	intrn	136602	136677	.	-	.	Parent=CGI_10006826;
	scaffold275	TRF	Tandem_Repeat	136602	136677	107	+	.	.
scaffold276	subtractBed	intrn	8430	8470	.	+	.	Parent=CGI_10006433;
	scaffold276	TRF	Tandem_Repeat	8430	8470	73	+	.	.
scaffold276	subtractBed	intrn	25631	25855	.	+	.	Parent=CGI_10006434;
	scaffold276	WUBlastX	DNA_IS4EU	25631	25855	23	+	.	.
scaffold276	subtractBed	intrn	28500	28679	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_IS4EU	28500	28679	36	-	.	.
scaffold276	subtractBed	intrn	29613	29717	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29613	29945	42	-	.	.
scaffold276	subtractBed	intrn	29685	29717	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29685	29957	45	-	.	.
scaffold276	subtractBed	intrn	29941	29945	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29613	29945	42	-	.	.
scaffold276	subtractBed	intrn	30469	30549	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_IS4EU	30469	30549	20	-	.	.
scaffold276	subtractBed	intrn	29941	29948	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29781	29948	50	-	.	.
scaffold276	subtractBed	intrn	29941	29954	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29838	29954	53	-	.	.
scaffold276	subtractBed	intrn	29941	29957	.	-	.	Parent=CGI_10006435;
	scaffold276	WUBlastX	DNA_P	29685	29957	45	-	.	.
scaffold276	subtractBed	intrn	43393	43443	.	-	.	Parent=CGI_10006436;
	scaffold276	TRF	Tandem_Repeat	43393	43443	95	+	.	.
scaffold276	subtractBed	intrn	80441	80481	.	+	.	Parent=CGI_10006438;
	scaffold276	TRF	Tandem_Repeat	80441	80481	82	+	.	.
scaffold276	subtractBed	intrn	92941	92988	.	-	.	Parent=CGI_10006439;
	scaffold276	TRF	Tandem_Repeat	92941	92988	96	+	.	.
scaffold276	subtractBed	intrn	118433	118468	.	+	.	Parent=CGI_10006440;
	scaffold276	TRF	Tandem_Repeat	118433	118468	54	+	.	.
scaffold276	subtractBed	intrn	118601	118649	.	+	.	Parent=CGI_10006440;
	scaffold276	TRF	Tandem_Repeat	118601	118649	89	+	.	.
scaffold278	subtractBed	intrn	43006	43285	.	-	.	Parent=CGI_10005567;
	scaffold278	TRF	Tandem_Repeat	43006	43285	377	+	.	.
scaffold278	subtractBed	intrn	44228	44907	.	-	.	Parent=CGI_10005567;
	scaffold278	TRF	Tandem_Repeat	44228	44907	603	+	.	.
scaffold278	subtractBed	intrn	44234	44907	.	-	.	Parent=CGI_10005567;
	scaffold278	TRF	Tandem_Repeat	44234	44907	573	+	.	.
scaffold278	subtractBed	intrn	62589	62978	.	-	.	Parent=CGI_10005569;
	scaffold278	TRF	Tandem_Repeat	62589	62978	512	+	.	.
scaffold278	subtractBed	intrn	73592	75436	.	+	.	Parent=CGI_10005570;
	scaffold278	TRF	Tandem_Repeat	73592	75436	1198	+	.	.
scaffold278	subtractBed	intrn	76047	76194	.	+	.	Parent=CGI_10005570;
	scaffold278	TRF	Tandem_Repeat	76047	76194	215	+	.	.
scaffold278	subtractBed	intrn	80802	80939	.	+	.	Parent=CGI_10005570;
	scaffold278	TRF	Tandem_Repeat	80802	80939	249	+	.	.
scaffold278	subtractBed	intrn	84102	84130	.	+	.	Parent=CGI_10005570;
	scaffold278	TRF	Tandem_Repeat	84102	84130	58	+	.	.
scaffold278	subtractBed	intrn	96145	96240	.	-	.	Parent=CGI_10005571;
	scaffold278	TRF	Tandem_Repeat	96145	96240	74	+	.	.
scaffold278	subtractBed	intrn	121172	121264	.	-	.	Parent=CGI_10005572;
	scaffold278	TRF	Tandem_Repeat	121172	121264	109	+	.	.
scaffold279	subtractBed	intrn	72111	72155	.	-	.	Parent=CGI_10012621;
	scaffold279	TRF	Tandem_Repeat	72111	72155	60	+	.	.
scaffold279	subtractBed	intrn	72110	72155	.	-	.	Parent=CGI_10012621;
	scaffold279	TRF	Tandem_Repeat	72110	72155	65	+	.	.
scaffold279	subtractBed	intrn	73878	73915	.	-	.	Parent=CGI_10012621;
	scaffold279	TRF	Tandem_Repeat	73878	73915	76	+	.	.
scaffold279	subtractBed	intrn	82495	82544	.	-	.	Parent=CGI_10012621;
	scaffold279	TRF	Tandem_Repeat	82495	82544	100	+	.	.
scaffold279	subtractBed	intrn	109411	109504	.	+	.	Parent=CGI_10012623;
	scaffold279	TRF	Tandem_Repeat	109411	109504	127	+	.	.
scaffold279	subtractBed	intrn	109695	109814	.	+	.	Parent=CGI_10012623;
	scaffold279	TRF	Tandem_Repeat	109695	109814	134	+	.	.
scaffold279	subtractBed	intrn	109941	110029	.	+	.	Parent=CGI_10012623;
	scaffold279	TRF	Tandem_Repeat	109941	110029	72	+	.	.
scaffold279	subtractBed	intrn	155084	155112	.	-	.	Parent=CGI_10012627;
	scaffold279	TRF	Tandem_Repeat	155084	155112	58	+	.	.
scaffold279	subtractBed	intrn	158752	158807	.	-	.	Parent=CGI_10012627;
	scaffold279	TRF	Tandem_Repeat	158752	158807	112	+	.	.
scaffold279	subtractBed	intrn	159318	159379	.	-	.	Parent=CGI_10012627;
	scaffold279	TRF	Tandem_Repeat	159318	159379	106	+	.	.
scaffold279	subtractBed	intrn	210835	210880	.	-	.	Parent=CGI_10012629;
	scaffold279	TRF	Tandem_Repeat	210835	210880	67	+	.	.
scaffold279	subtractBed	intrn	229266	229300	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	229266	229300	70	+	.	.
scaffold279	subtractBed	intrn	236254	236493	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	236254	236493	338	+	.	.
scaffold279	subtractBed	intrn	238835	239560	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	238835	239560	517	+	.	.
scaffold279	subtractBed	intrn	238840	239560	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	238840	239560	586	+	.	.
scaffold279	subtractBed	intrn	238902	239560	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	238902	239560	605	+	.	.
scaffold279	subtractBed	intrn	242644	242963	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	242644	242963	529	+	.	.
scaffold279	subtractBed	intrn	242504	242965	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	242504	242965	504	+	.	.
scaffold279	subtractBed	intrn	246040	246092	.	+	.	Parent=CGI_10012630;
	scaffold279	TRF	Tandem_Repeat	246040	246092	88	+	.	.
scaffold279	subtractBed	intrn	299178	299233	.	+	.	Parent=CGI_10012633;
	scaffold279	TRF	Tandem_Repeat	299178	299233	71	+	.	.
scaffold279	subtractBed	intrn	299170	299229	.	+	.	Parent=CGI_10012633;
	scaffold279	TRF	Tandem_Repeat	299170	299229	66	+	.	.
scaffold279	subtractBed	intrn	322022	322104	.	-	.	Parent=CGI_10012637;
	scaffold279	TRF	Tandem_Repeat	322022	322104	148	+	.	.
scaffold279	subtractBed	intrn	323149	323222	.	-	.	Parent=CGI_10012637;
	scaffold279	TRF	Tandem_Repeat	323149	323222	148	+	.	.
scaffold280	subtractBed	intrn	8390	8441	.	-	.	Parent=CGI_10024562;
	scaffold280	TRF	Tandem_Repeat	8390	8441	104	+	.	.
scaffold280	subtractBed	intrn	25025	25086	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	25025	25086	124	+	.	.
scaffold280	subtractBed	intrn	27659	27716	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	27659	27716	70	+	.	.
scaffold280	subtractBed	intrn	28272	28449	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	28272	28449	94	+	.	.
scaffold280	subtractBed	intrn	29357	29466	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	29357	29466	98	+	.	.
scaffold280	subtractBed	intrn	32666	32692	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	32666	32692	54	+	.	.
scaffold280	subtractBed	intrn	36228	36301	.	-	.	Parent=CGI_10024564;
	scaffold280	TRF	Tandem_Repeat	36228	36301	121	+	.	.
scaffold280	subtractBed	intrn	66509	68119	.	-	.	Parent=CGI_10024566;
	scaffold280	TRF	Tandem_Repeat	66509	68119	2192	+	.	.
scaffold280	subtractBed	intrn	66548	68119	.	-	.	Parent=CGI_10024566;
	scaffold280	TRF	Tandem_Repeat	66548	68119	2206	+	.	.
scaffold280	subtractBed	intrn	68155	68190	.	-	.	Parent=CGI_10024566;
	scaffold280	TRF	Tandem_Repeat	68155	68190	56	+	.	.
scaffold280	subtractBed	intrn	99579	99607	.	-	.	Parent=CGI_10024568;
	scaffold280	TRF	Tandem_Repeat	99579	99607	51	+	.	.
scaffold280	subtractBed	intrn	169995	170195	.	+	.	Parent=CGI_10024573;
	scaffold280	TRF	Tandem_Repeat	169995	170195	185	+	.	.
scaffold280	subtractBed	intrn	244769	244812	.	+	.	Parent=CGI_10024580;
	scaffold280	TRF	Tandem_Repeat	244769	244812	79	+	.	.
scaffold280	subtractBed	intrn	251803	251855	.	+	.	Parent=CGI_10024581;
	scaffold280	TRF	Tandem_Repeat	251803	251855	90	+	.	.
scaffold280	subtractBed	intrn	281538	281576	.	+	.	Parent=CGI_10024583;
	scaffold280	TRF	Tandem_Repeat	281538	281576	78	+	.	.
scaffold280	subtractBed	intrn	285733	285771	.	+	.	Parent=CGI_10024583;
	scaffold280	TRF	Tandem_Repeat	285733	285771	78	+	.	.
scaffold280	subtractBed	intrn	291919	292087	.	+	.	Parent=CGI_10024583;
	scaffold280	TRF	Tandem_Repeat	291919	292087	144	+	.	.
scaffold280	subtractBed	intrn	417094	417139	.	-	.	Parent=CGI_10024589;
	scaffold280	TRF	Tandem_Repeat	417094	417139	92	+	.	.
scaffold280	subtractBed	intrn	427512	427567	.	-	.	Parent=CGI_10024590;
	scaffold280	TRF	Tandem_Repeat	427512	427567	112	+	.	.
scaffold280	subtractBed	intrn	472282	472415	.	-	.	Parent=CGI_10024591;
	scaffold280	TRF	Tandem_Repeat	472282	472415	196	+	.	.
scaffold280	subtractBed	intrn	476484	476528	.	-	.	Parent=CGI_10024591;
	scaffold280	TRF	Tandem_Repeat	476484	476528	90	+	.	.
scaffold280	subtractBed	intrn	477066	477113	.	-	.	Parent=CGI_10024591;
	scaffold280	TRF	Tandem_Repeat	477066	477113	96	+	.	.
scaffold280	subtractBed	intrn	568788	568936	.	-	.	Parent=CGI_10024594;
	scaffold280	TRF	Tandem_Repeat	568788	568950	147	+	.	.
scaffold280	subtractBed	intrn	569947	570192	.	-	.	Parent=CGI_10024594;
	scaffold280	TRF	Tandem_Repeat	569947	570192	420	+	.	.
scaffold280	subtractBed	intrn	588779	588994	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_CR1	588779	588994	20	-	.	.
scaffold280	subtractBed	intrn	588936	589466	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_L2	588936	589466	229	-	.	.
scaffold280	subtractBed	intrn	581977	584439	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_L2	581977	584439	1203	-	.	.
scaffold280	subtractBed	intrn	589113	589568	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_CR1-L2	589113	589568	204	-	.	.
scaffold280	subtractBed	intrn	590208	590663	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_CR1-L2	590208	590663	247	-	.	.
scaffold280	subtractBed	intrn	590196	590813	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_L1	590196	590813	51	-	.	.
scaffold280	subtractBed	intrn	590115	590663	.	-	.	Parent=CGI_10024596;
	scaffold280	WUBlastX	LINE_L1	590115	590663	59	-	.	.
scaffold280	subtractBed	intrn	602022	602049	.	-	.	Parent=CGI_10024598;
	scaffold280	TRF	Tandem_Repeat	602022	602049	56	+	.	.
scaffold280	subtractBed	intrn	605141	605218	.	-	.	Parent=CGI_10024598;
	scaffold280	TRF	Tandem_Repeat	605141	605218	156	+	.	.
scaffold280	subtractBed	intrn	605235	605264	.	-	.	Parent=CGI_10024598;
	scaffold280	TRF	Tandem_Repeat	605235	605264	60	+	.	.
scaffold280	subtractBed	intrn	649597	649971	.	-	.	Parent=CGI_10024601;
	scaffold280	WUBlastX	LTR_DIRS	649597	649971	96	+	.	.
scaffold280	subtractBed	intrn	649684	650010	.	-	.	Parent=CGI_10024601;
	scaffold280	WUBlastX	LTR_DIRS	649684	650010	138	+	.	.
scaffold280	subtractBed	intrn	696902	696931	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	696902	696931	60	+	.	.
scaffold280	subtractBed	intrn	700371	700423	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	700371	700423	106	+	.	.
scaffold280	subtractBed	intrn	700468	700506	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	700468	700506	78	+	.	.
scaffold280	subtractBed	intrn	695453	695968	.	-	.	Parent=CGI_10024602;
	scaffold280	WUBlastX	LTR_ERV1	695453	695968	37	-	.	.
scaffold280	subtractBed	intrn	716058	716140	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	716058	716140	130	+	.	.
scaffold280	subtractBed	intrn	716851	716890	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	716851	716890	53	+	.	.
scaffold280	subtractBed	intrn	716851	716886	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	716851	716886	63	+	.	.
scaffold280	subtractBed	intrn	718605	718682	.	-	.	Parent=CGI_10024602;
	scaffold280	TRF	Tandem_Repeat	718605	718682	149	+	.	.
scaffold280	subtractBed	intrn	721097	721136	.	-	.	Parent=CGI_10024604;
	scaffold280	TRF	Tandem_Repeat	721097	721136	80	+	.	.
scaffold280	subtractBed	intrn	721464	721508	.	-	.	Parent=CGI_10024604;
	scaffold280	TRF	Tandem_Repeat	721464	721508	81	+	.	.
scaffold280	subtractBed	intrn	748327	748667	.	+	.	Parent=CGI_10024607;
	scaffold280	TRF	Tandem_Repeat	748327	748667	538	+	.	.
scaffold280	subtractBed	intrn	765733	765806	.	-	.	Parent=CGI_10024609;
	scaffold280	TRF	Tandem_Repeat	765733	765806	130	+	.	.
scaffold280	subtractBed	intrn	934376	934411	.	-	.	Parent=CGI_10024612;
	scaffold280	TRF	Tandem_Repeat	934376	934411	72	+	.	.
scaffold285	subtractBed	intrn	22840	22888	.	-	.	Parent=CGI_10011150;
	scaffold285	TRF	Tandem_Repeat	22840	22888	98	+	.	.
scaffold285	subtractBed	intrn	36944	36984	.	-	.	Parent=CGI_10011152;
	scaffold285	TRF	Tandem_Repeat	36944	36984	82	+	.	.
scaffold285	subtractBed	intrn	38194	38233	.	-	.	Parent=CGI_10011152;
	scaffold285	TRF	Tandem_Repeat	38194	38233	80	+	.	.
scaffold285	subtractBed	intrn	59627	60531	.	+	.	Parent=CGI_10011153;
	scaffold285	TRF	Tandem_Repeat	59627	60531	1213	+	.	.
scaffold285	subtractBed	intrn	61702	61888	.	+	.	Parent=CGI_10011153;
	scaffold285	TRF	Tandem_Repeat	61702	61888	61	+	.	.
scaffold285	subtractBed	intrn	61742	61941	.	+	.	Parent=CGI_10011153;
	scaffold285	TRF	Tandem_Repeat	61742	61941	62	+	.	.
scaffold285	subtractBed	intrn	118780	118828	.	+	.	Parent=CGI_10011159;
	scaffold285	TRF	Tandem_Repeat	118780	118828	98	+	.	.
scaffold285	subtractBed	intrn	132475	132600	.	-	.	Parent=CGI_10011160;
	scaffold285	TRF	Tandem_Repeat	132475	132615	257	+	.	.
scaffold285	subtractBed	intrn	165136	165185	.	-	.	Parent=CGI_10011162;
	scaffold285	TRF	Tandem_Repeat	165136	165185	100	+	.	.
scaffold286	subtractBed	intrn	4583	4630	.	-	.	Parent=CGI_10015954;
	scaffold286	TRF	Tandem_Repeat	4583	4630	96	+	.	.
scaffold286	subtractBed	intrn	6874	7107	.	-	.	Parent=CGI_10015954;
	scaffold286	WUBlastX	LINE_L2	6874	7107	95	+	.	.
scaffold286	subtractBed	intrn	71327	71374	.	+	.	Parent=CGI_10015958;
	scaffold286	TRF	Tandem_Repeat	71327	71374	96	+	.	.
scaffold286	subtractBed	intrn	71809	72180	.	+	.	Parent=CGI_10015958;
	scaffold286	WUBlastX	LINE_L1-Tx1	71809	72180	72	-	.	.
scaffold286	subtractBed	intrn	76096	76530	.	+	.	Parent=CGI_10015958;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	76096	76530	219	-	.	.
scaffold286	subtractBed	intrn	75998	76087	.	+	.	Parent=CGI_10015958;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	75998	76087	37	-	.	.
scaffold286	subtractBed	intrn	76530	76964	.	+	.	Parent=CGI_10015958;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	76530	76964	107	-	.	.
scaffold286	subtractBed	intrn	105583	105765	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	105583	105765	73	+	.	.
scaffold286	subtractBed	intrn	102430	103440	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	102430	103440	56	+	.	.
scaffold286	subtractBed	intrn	105502	105867	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	105502	105867	63	+	.	.
scaffold286	subtractBed	intrn	104479	104985	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	104479	104985	104	+	.	.
scaffold286	subtractBed	intrn	103461	103925	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	103461	103925	338	+	.	.
scaffold286	subtractBed	intrn	104482	104895	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	104482	104895	149	+	.	.
scaffold286	subtractBed	intrn	103928	104506	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_RTE-X	103928	104506	350	+	.	.
scaffold286	subtractBed	intrn	103377	103868	.	-	.	Parent=CGI_10015959;
	scaffold286	WUBlastX	LINE_L2	103377	103868	69	+	.	.
scaffold286	subtractBed	intrn	111174	111350	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	111174	111350	128	+	.	.
scaffold286	subtractBed	intrn	111351	112483	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	111351	112483	1395	+	.	.
scaffold286	subtractBed	intrn	111351	112814	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	111351	112814	1477	+	.	.
scaffold286	subtractBed	intrn	112270	112814	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	112270	112814	138	+	.	.
scaffold286	subtractBed	intrn	112487	112814	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	112487	112814	154	+	.	.
scaffold286	subtractBed	intrn	124338	124372	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	124338	124372	70	+	.	.
scaffold286	subtractBed	intrn	126510	126563	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	126510	126563	108	+	.	.
scaffold286	subtractBed	intrn	131114	131238	.	-	.	Parent=CGI_10015959;
	scaffold286	TRF	Tandem_Repeat	131114	131238	181	+	.	.
scaffold286	subtractBed	intrn	155304	155642	.	-	.	Parent=CGI_10015961;
	scaffold286	WUBlastX	DNA_TcMar-Marin	155304	155642	64	+	.	.
scaffold286	subtractBed	intrn	159110	159155	.	-	.	Parent=CGI_10015961;
	scaffold286	TRF	Tandem_Repeat	159110	159155	64	+	.	.
scaffold286	subtractBed	intrn	159114	159154	.	-	.	Parent=CGI_10015961;
	scaffold286	TRF	Tandem_Repeat	159114	159154	66	+	.	.
scaffold286	subtractBed	intrn	157244	157441	.	-	.	Parent=CGI_10015961;
	scaffold286	WUBlastX	DNA_TcMar-Marin	157244	157441	41	+	.	.
scaffold286	subtractBed	intrn	183393	183893	.	-	.	Parent=CGI_10015964;
	scaffold286	WUBlastX	LTR_Gypsy	183393	183893	134	-	.	.
scaffold286	subtractBed	intrn	183216	183932	.	-	.	Parent=CGI_10015964;
	scaffold286	WUBlastX	LTR_Gypsy	183216	183932	129	-	.	.
scaffold286	subtractBed	intrn	207676	208011	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	207676	208011	173	+	.	.
scaffold286	subtractBed	intrn	208878	209075	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208878	209075	60	+	.	.
scaffold286	subtractBed	intrn	208534	208731	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208534	208731	49	+	.	.
scaffold286	subtractBed	intrn	208129	208362	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208129	208362	67	+	.	.
scaffold286	subtractBed	intrn	208168	208365	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208168	208365	121	+	.	.
scaffold286	subtractBed	intrn	208522	208674	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208522	208674	61	+	.	.
scaffold286	subtractBed	intrn	208881	209042	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	208881	209042	84	+	.	.
scaffold286	subtractBed	intrn	209128	209268	.	+	.	Parent=CGI_10015965;
	scaffold286	WUBlastX	DNA_Kolobok	209128	209268	52	+	.	.
scaffold286	subtractBed	intrn	282687	283715	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	282687	283715	916	-	.	.
scaffold286	subtractBed	intrn	284821	285438	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	284821	285438	442	-	.	.
scaffold286	subtractBed	intrn	283721	284821	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	283721	284821	735	-	.	.
scaffold286	subtractBed	intrn	287296	288240	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	287296	288240	247	-	.	.
scaffold286	subtractBed	intrn	285429	287246	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	285429	287246	1125	-	.	.
scaffold286	subtractBed	intrn	288316	288625	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	288316	288804	83	-	.	.
scaffold286	subtractBed	intrn	288316	288621	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	288316	288621	183	-	.	.
scaffold286	subtractBed	intrn	288283	288570	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	288283	288570	283	-	.	.
scaffold286	subtractBed	intrn	288247	288477	.	-	.	Parent=CGI_10015966;
	scaffold286	WUBlastX	LTR_Pao	288247	288477	124	-	.	.
scaffold286	subtractBed	intrn	341206	342119	.	-	.	Parent=CGI_10015970;
	scaffold286	TRF	Tandem_Repeat	341206	342119	886	+	.	.
scaffold286	subtractBed	intrn	407894	407964	.	+	.	Parent=CGI_10015971;
	scaffold286	TRF	Tandem_Repeat	407894	407964	142	+	.	.
scaffold286	subtractBed	intrn	409828	409875	.	+	.	Parent=CGI_10015971;
	scaffold286	TRF	Tandem_Repeat	409828	409875	96	+	.	.
scaffold286	subtractBed	intrn	425797	427145	.	-	.	Parent=CGI_10015973;
	scaffold286	TRF	Tandem_Repeat	425797	427145	916	+	.	.
scaffold286	subtractBed	intrn	425797	427145	.	-	.	Parent=CGI_10015973;
	scaffold286	TRF	Tandem_Repeat	425797	427145	934	+	.	.
scaffold286	subtractBed	intrn	425794	427148	.	-	.	Parent=CGI_10015973;
	scaffold286	TRF	Tandem_Repeat	425794	427148	796	+	.	.
scaffold286	subtractBed	intrn	435123	435191	.	-	.	Parent=CGI_10015973;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435123	435191	38	-	.	.
scaffold286	subtractBed	intrn	435099	435179	.	-	.	Parent=CGI_10015973;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435099	435179	26	-	.	.
scaffold286	subtractBed	intrn	435167	435682	.	-	.	Parent=CGI_10015973;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435167	435682	161	-	.	.
scaffold286	subtractBed	intrn	434257	434424	.	-	.	Parent=CGI_10015973;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	434257	434424	66	-	.	.
scaffold286	subtractBed	intrn	435123	435191	.	+	.	Parent=CGI_10015974;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435123	435191	38	-	.	.
scaffold286	subtractBed	intrn	435099	435179	.	+	.	Parent=CGI_10015974;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435099	435179	26	-	.	.
scaffold286	subtractBed	intrn	435167	435682	.	+	.	Parent=CGI_10015974;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	435167	435682	161	-	.	.
scaffold286	subtractBed	intrn	434257	434424	.	+	.	Parent=CGI_10015974;
	scaffold286	WUBlastX	DNA_TcMar-Tc1	434257	434424	66	-	.	.
scaffold286	subtractBed	intrn	443015	443088	.	+	.	Parent=CGI_10015974;
	scaffold286	TRF	Tandem_Repeat	443015	443088	60	+	.	.
scaffold286	subtractBed	intrn	443018	443072	.	+	.	Parent=CGI_10015974;
	scaffold286	TRF	Tandem_Repeat	443018	443072	74	+	.	.
scaffold286	subtractBed	intrn	443015	443087	.	+	.	Parent=CGI_10015974;
	scaffold286	TRF	Tandem_Repeat	443015	443087	76	+	.	.
scaffold286	subtractBed	intrn	444857	445021	.	+	.	Parent=CGI_10015974;
	scaffold286	WUBlastX	DNA_Harbinger	444857	445021	66	-	.	.
scaffold286	subtractBed	intrn	441313	442817	.	+	.	Parent=CGI_10015974;
	scaffold286	TRF	Tandem_Repeat	441313	442817	2237	+	.	.
scaffold288	subtractBed	intrn	15326	15670	.	+	.	Parent=CGI_10020653;
	scaffold288	WUBlastX	LTR_Gypsy	15326	15670	75	-	.	.
scaffold288	subtractBed	intrn	16679	16977	.	+	.	Parent=CGI_10020653;
	scaffold288	TRF	Tandem_Repeat	16679	16977	167	+	.	.
scaffold288	subtractBed	intrn	16838	16984	.	+	.	Parent=CGI_10020653;
	scaffold288	TRF	Tandem_Repeat	16838	16984	151	+	.	.
scaffold288	subtractBed	intrn	17535	17625	.	+	.	Parent=CGI_10020653;
	scaffold288	TRF	Tandem_Repeat	17535	17625	132	+	.	.
scaffold288	subtractBed	intrn	32463	32513	.	+	.	Parent=CGI_10020656;
	scaffold288	TRF	Tandem_Repeat	32463	32513	102	+	.	.
scaffold288	subtractBed	intrn	39052	39126	.	+	.	Parent=CGI_10020657;
	scaffold288	WUBlastX	LINE_CR1-L2	39052	39126	28	-	.	.
scaffold288	subtractBed	intrn	39081	39656	.	+	.	Parent=CGI_10020657;
	scaffold288	WUBlastX	LINE_L2	39081	39656	158	-	.	.
scaffold288	subtractBed	intrn	39402	39707	.	+	.	Parent=CGI_10020657;
	scaffold288	WUBlastX	LINE_CR1	39402	39707	61	-	.	.
scaffold288	subtractBed	intrn	120260	120311	.	-	.	Parent=CGI_10020658;
	scaffold288	TRF	Tandem_Repeat	120260	120311	104	+	.	.
scaffold288	subtractBed	intrn	137358	137657	.	-	.	Parent=CGI_10020658;
	scaffold288	WUBlastX	LINE_L1-Tx1	137358	137657	80	-	.	.
scaffold288	subtractBed	intrn	136387	137262	.	-	.	Parent=CGI_10020658;
	scaffold288	WUBlastX	LINE_L1-Tx1	136387	137262	29	-	.	.
scaffold288	subtractBed	intrn	137388	137627	.	-	.	Parent=CGI_10020658;
	scaffold288	WUBlastX	LINE_L1-Tx1	137388	137627	122	-	.	.
scaffold288	subtractBed	intrn	137379	137720	.	-	.	Parent=CGI_10020658;
	scaffold288	WUBlastX	LINE_L1-Tx1	137379	137720	36	-	.	.
scaffold288	subtractBed	intrn	145203	145346	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	LTR_DIRS	145203	145346	47	-	.	.
scaffold288	subtractBed	intrn	145366	145617	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	LTR_DIRS	145366	145617	96	-	.	.
scaffold288	subtractBed	intrn	145859	146263	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	LTR_DIRS	145859	146263	24	-	.	.
scaffold288	subtractBed	intrn	158671	159126	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	DNA_TcMar-Tc1	158671	159126	262	-	.	.
scaffold288	subtractBed	intrn	159110	159565	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	DNA_TcMar-Tc1	159110	159565	195	-	.	.
scaffold288	subtractBed	intrn	159565	159654	.	+	.	Parent=CGI_10020659;
	scaffold288	WUBlastX	DNA_TcMar-Tc1	159565	159654	25	-	.	.
scaffold288	subtractBed	intrn	160944	160986	.	+	.	Parent=CGI_10020659;
	scaffold288	TRF	Tandem_Repeat	160944	160986	86	+	.	.
scaffold288	subtractBed	intrn	168714	169016	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LTR_Pao	168714	169016	85	+	.	.
scaffold288	subtractBed	intrn	168336	169019	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LTR_Pao	168336	169019	68	+	.	.
scaffold288	subtractBed	intrn	180591	180627	.	-	.	Parent=CGI_10020660;
	scaffold288	TRF	Tandem_Repeat	180591	180627	56	+	.	.
scaffold288	subtractBed	intrn	209609	209719	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1-Tx1	209609	209719	60	-	.	.
scaffold288	subtractBed	intrn	210776	211132	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1-Tx1	210776	211132	102	-	.	.
scaffold288	subtractBed	intrn	209609	209740	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1-Tx1	209609	209740	57	-	.	.
scaffold288	subtractBed	intrn	207804	208109	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	DNA_Harbinger	207804	208109	121	-	.	.
scaffold288	subtractBed	intrn	208911	209609	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_RTE-BovB	208911	209609	71	-	.	.
scaffold288	subtractBed	intrn	210555	210725	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1	210555	210725	91	-	.	.
scaffold288	subtractBed	intrn	209031	209609	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1-Tx1	209031	209609	375	-	.	.
scaffold288	subtractBed	intrn	207813	208184	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	DNA_Harbinger	207813	208184	107	-	.	.
scaffold288	subtractBed	intrn	209594	209788	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1-Tx1	209594	209788	34	-	.	.
scaffold288	subtractBed	intrn	210528	210878	.	-	.	Parent=CGI_10020660;
	scaffold288	WUBlastX	LINE_L1	210528	210878	81	-	.	.
scaffold288	subtractBed	intrn	214577	215336	.	-	.	Parent=CGI_10020660;
	scaffold288	TRF	Tandem_Repeat	214577	215924	1306	+	.	.
scaffold288	subtractBed	intrn	215242	215336	.	-	.	Parent=CGI_10020660;
	scaffold288	TRF	Tandem_Repeat	215242	215907	407	+	.	.
scaffold288	subtractBed	intrn	369175	370180	.	-	.	Parent=CGI_10020666;
	scaffold288	TRF	Tandem_Repeat	369175	370180	1520	+	.	.
scaffold288	subtractBed	intrn	377389	377439	.	-	.	Parent=CGI_10020667;
	scaffold288	TRF	Tandem_Repeat	377389	377439	102	+	.	.
scaffold288	subtractBed	intrn	402265	402292	.	+	.	Parent=CGI_10020669;
	scaffold288	TRF	Tandem_Repeat	402265	402292	56	+	.	.
scaffold288	subtractBed	intrn	404680	405168	.	+	.	Parent=CGI_10020669;
	scaffold288	TRF	Tandem_Repeat	404680	405168	562	+	.	.
scaffold288	subtractBed	intrn	408426	408780	.	+	.	Parent=CGI_10020669;
	scaffold288	TRF	Tandem_Repeat	408426	408780	436	+	.	.
scaffold288	subtractBed	intrn	413223	413286	.	+	.	Parent=CGI_10020669;
	scaffold288	TRF	Tandem_Repeat	413223	413286	92	+	.	.
scaffold288	subtractBed	intrn	430267	430323	.	+	.	Parent=CGI_10020671;
	scaffold288	TRF	Tandem_Repeat	430267	430323	51	+	.	.
scaffold288	subtractBed	intrn	465043	465080	.	-	.	Parent=CGI_10020674;
	scaffold288	TRF	Tandem_Repeat	465043	465080	76	+	.	.
scaffold288	subtractBed	intrn	481410	481447	.	+	.	Parent=CGI_10020675;
	scaffold288	TRF	Tandem_Repeat	481410	481447	76	+	.	.
scaffold288	subtractBed	intrn	484394	484464	.	+	.	Parent=CGI_10020675;
	scaffold288	TRF	Tandem_Repeat	484394	484464	133	+	.	.
scaffold288	subtractBed	intrn	501053	501099	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	501053	501099	94	+	.	.
scaffold288	subtractBed	intrn	502576	502648	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	502576	502648	137	+	.	.
scaffold288	subtractBed	intrn	503532	503567	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	503532	503567	72	+	.	.
scaffold288	subtractBed	intrn	508978	509284	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	508978	509289	406	+	.	.
scaffold288	subtractBed	intrn	508978	509284	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	508978	509289	438	+	.	.
scaffold288	subtractBed	intrn	510540	510583	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	510540	510583	70	+	.	.
scaffold288	subtractBed	intrn	511799	511842	.	+	.	Parent=CGI_10020676;
	scaffold288	TRF	Tandem_Repeat	511799	511842	70	+	.	.
scaffold288	subtractBed	intrn	522235	522272	.	+	.	Parent=CGI_10020677;
	scaffold288	TRF	Tandem_Repeat	522235	522272	69	+	.	.
scaffold288	subtractBed	intrn	528627	529382	.	+	.	Parent=CGI_10020677;
	scaffold288	TRF	Tandem_Repeat	528627	529382	1148	+	.	.
scaffold288	subtractBed	intrn	528627	529382	.	-	.	Parent=CGI_10020678;
	scaffold288	TRF	Tandem_Repeat	528627	529382	1148	+	.	.
scaffold288	subtractBed	intrn	556817	556859	.	-	.	Parent=CGI_10020679;
	scaffold288	TRF	Tandem_Repeat	556817	556859	86	+	.	.
scaffold288	subtractBed	intrn	584778	584851	.	+	.	Parent=CGI_10020681;
	scaffold288	TRF	Tandem_Repeat	584778	584851	148	+	.	.
scaffold288	subtractBed	intrn	591087	591149	.	+	.	Parent=CGI_10020681;
	scaffold288	TRF	Tandem_Repeat	591087	591149	119	+	.	.
scaffold288	subtractBed	intrn	606018	606053	.	+	.	Parent=CGI_10020684;
	scaffold288	TRF	Tandem_Repeat	606018	606053	72	+	.	.
scaffold288	subtractBed	intrn	612664	612705	.	+	.	Parent=CGI_10020686;
	scaffold288	TRF	Tandem_Repeat	612664	612705	75	+	.	.
scaffold288	subtractBed	intrn	612705	612731	.	+	.	Parent=CGI_10020686;
	scaffold288	TRF	Tandem_Repeat	612705	612731	54	+	.	.
scaffold288	subtractBed	intrn	638510	638579	.	+	.	Parent=CGI_10020688;
	scaffold288	TRF	Tandem_Repeat	638510	638579	133	+	.	.
scaffold29	subtractBed	intrn	18617	19819	.	-	.	Parent=CGI_10001774;
	scaffold29	TRF	Tandem_Repeat	18617	19819	1618	+	.	.
scaffold290	subtractBed	intrn	25297	25344	.	+	.	Parent=CGI_10018526;
	scaffold290	TRF	Tandem_Repeat	25297	25344	96	+	.	.
scaffold290	subtractBed	intrn	31996	32154	.	-	.	Parent=CGI_10018528;
	scaffold290	TRF	Tandem_Repeat	31996	32154	131	+	.	.
scaffold290	subtractBed	intrn	32372	32512	.	-	.	Parent=CGI_10018528;
	scaffold290	TRF	Tandem_Repeat	32372	32512	129	+	.	.
scaffold290	subtractBed	intrn	32590	32716	.	-	.	Parent=CGI_10018528;
	scaffold290	TRF	Tandem_Repeat	32590	32716	137	+	.	.
scaffold290	subtractBed	intrn	58007	58351	.	+	.	Parent=CGI_10018531;
	scaffold290	WUBlastX	LINE_RTE-X	58007	58351	70	+	.	.
scaffold290	subtractBed	intrn	57842	58201	.	+	.	Parent=CGI_10018531;
	scaffold290	WUBlastX	LINE_RTE-X	57842	58201	24	+	.	.
scaffold290	subtractBed	intrn	57974	58186	.	+	.	Parent=CGI_10018531;
	scaffold290	WUBlastX	LINE_RTE-X	57974	58186	52	+	.	.
scaffold290	subtractBed	intrn	64602	64767	.	+	.	Parent=CGI_10018531;
	scaffold290	TRF	Tandem_Repeat	64602	64767	131	+	.	.
scaffold290	subtractBed	intrn	60034	60429	.	+	.	Parent=CGI_10018531;
	scaffold290	WUBlastX	LINE_RTE-BovB	60034	60429	109	-	.	.
scaffold290	subtractBed	intrn	60097	60453	.	+	.	Parent=CGI_10018531;
	scaffold290	WUBlastX	LINE_RTE-BovB	60097	60453	256	-	.	.
scaffold290	subtractBed	intrn	84299	84592	.	-	.	Parent=CGI_10018533;
	scaffold290	WUBlastX	LINE_L2	84299	84592	121	-	.	.
scaffold290	subtractBed	intrn	84299	84700	.	-	.	Parent=CGI_10018533;
	scaffold290	WUBlastX	LINE_CR1-L2	84299	84700	23	-	.	.
scaffold290	subtractBed	intrn	103791	103823	.	+	.	Parent=CGI_10018534;
	scaffold290	TRF	Tandem_Repeat	103791	103823	66	+	.	.
scaffold290	subtractBed	intrn	163354	163400	.	+	.	Parent=CGI_10018537;
	scaffold290	TRF	Tandem_Repeat	163354	163400	85	+	.	.
scaffold290	subtractBed	intrn	164616	164669	.	+	.	Parent=CGI_10018537;
	scaffold290	TRF	Tandem_Repeat	164616	164669	108	+	.	.
scaffold290	subtractBed	intrn	166327	166369	.	+	.	Parent=CGI_10018537;
	scaffold290	TRF	Tandem_Repeat	166327	166369	86	+	.	.
scaffold290	subtractBed	intrn	185117	185272	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	185117	185272	63	+	.	.
scaffold290	subtractBed	intrn	185313	185663	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	185313	185663	28	+	.	.
scaffold290	subtractBed	intrn	185610	185699	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	185610	185699	24	+	.	.
scaffold290	subtractBed	intrn	184739	185245	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	184739	185245	88	+	.	.
scaffold290	subtractBed	intrn	184643	185269	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	184643	185269	44	+	.	.
scaffold290	subtractBed	intrn	188272	188622	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	188272	188622	25	+	.	.
scaffold290	subtractBed	intrn	187506	188252	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	187506	188252	61	+	.	.
scaffold290	subtractBed	intrn	187617	188204	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	187617	188204	76	+	.	.
scaffold290	subtractBed	intrn	188569	188658	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	188569	188658	24	+	.	.
scaffold290	subtractBed	intrn	188076	188231	.	-	.	Parent=CGI_10018539;
	scaffold290	WUBlastX	LINE_RTE-X	188076	188231	63	+	.	.
scaffold290	subtractBed	intrn	280746	280844	.	+	.	Parent=CGI_10018541;
	scaffold290	TRF	Tandem_Repeat	280746	280844	153	+	.	.
scaffold290	subtractBed	intrn	285275	285312	.	+	.	Parent=CGI_10018541;
	scaffold290	TRF	Tandem_Repeat	285275	285312	58	+	.	.
scaffold290	subtractBed	intrn	303141	303168	.	-	.	Parent=CGI_10018542;
	scaffold290	TRF	Tandem_Repeat	303141	303168	56	+	.	.
scaffold290	subtractBed	intrn	303166	303205	.	-	.	Parent=CGI_10018542;
	scaffold290	TRF	Tandem_Repeat	303166	303205	80	+	.	.
scaffold290	subtractBed	intrn	303204	303237	.	-	.	Parent=CGI_10018542;
	scaffold290	TRF	Tandem_Repeat	303204	303237	68	+	.	.
scaffold290	subtractBed	intrn	307117	307179	.	-	.	Parent=CGI_10018542;
	scaffold290	TRF	Tandem_Repeat	307117	307179	108	+	.	.
scaffold290	subtractBed	intrn	307214	307247	.	-	.	Parent=CGI_10018542;
	scaffold290	TRF	Tandem_Repeat	307214	307247	68	+	.	.
scaffold290	subtractBed	intrn	394133	394177	.	+	.	Parent=CGI_10018549;
	scaffold290	TRF	Tandem_Repeat	394133	394177	90	+	.	.
scaffold290	subtractBed	intrn	397481	397557	.	+	.	Parent=CGI_10018549;
	scaffold290	TRF	Tandem_Repeat	397481	397557	127	+	.	.
scaffold290	subtractBed	intrn	395086	395361	.	+	.	Parent=CGI_10018549;
	scaffold290	WUBlastX	LINE_RTE-X	395086	395361	74	+	.	.
scaffold290	subtractBed	intrn	394912	395367	.	+	.	Parent=CGI_10018549;
	scaffold290	WUBlastX	LINE_RTE-X	394912	395367	45	+	.	.
scaffold290	subtractBed	intrn	412132	412185	.	+	.	Parent=CGI_10018549;
	scaffold290	TRF	Tandem_Repeat	412132	412185	101	+	.	.
scaffold290	subtractBed	intrn	553307	553360	.	+	.	Parent=CGI_10018556;
	scaffold290	TRF	Tandem_Repeat	553307	553360	108	+	.	.
scaffold290	subtractBed	intrn	552412	552690	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552412	552690	238	+	.	.
scaffold290	subtractBed	intrn	552735	552935	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552735	552935	92	+	.	.
scaffold290	subtractBed	intrn	552319	552690	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552319	552690	127	+	.	.
scaffold290	subtractBed	intrn	552412	552849	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552412	552849	95	+	.	.
scaffold290	subtractBed	intrn	552732	552980	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552732	552980	78	+	.	.
scaffold290	subtractBed	intrn	552705	553031	.	+	.	Parent=CGI_10018556;
	scaffold290	WUBlastX	LTR_Gypsy	552705	553031	23	+	.	.
scaffold29126	subtractBed	intrn	3861	3947	.	-	.	Parent=CGI_10000483;
	scaffold29126	TRF	Tandem_Repeat	3861	3947	122	+	.	.
scaffold29126	subtractBed	intrn	4041	4175	.	-	.	Parent=CGI_10000483;
	scaffold29126	TRF	Tandem_Repeat	4041	4175	76	+	.	.
scaffold292	subtractBed	intrn	8573	8698	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	DNA_hAT-Ac	8573	8698	75	+	.	.
scaffold292	subtractBed	intrn	7438	8094	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_L1-Tx1	7438	8094	121	+	.	.
scaffold292	subtractBed	intrn	7432	7944	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_L1-Tx1	7432	7944	241	+	.	.
scaffold292	subtractBed	intrn	5899	7074	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_L1-Tx1	5899	7074	316	+	.	.
scaffold292	subtractBed	intrn	7052	7435	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_L1-Tx1	7052	7435	135	+	.	.
scaffold292	subtractBed	intrn	7166	7435	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_L1	7166	7435	145	+	.	.
scaffold292	subtractBed	intrn	8050	8169	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LINE_R1	8050	8169	25	+	.	.
scaffold292	subtractBed	intrn	17968	18999	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LTR_Pao	17968	18999	370	-	.	.
scaffold292	subtractBed	intrn	18211	19020	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	LTR_Pao	18211	19020	697	-	.	.
scaffold292	subtractBed	intrn	23814	23844	.	+	.	Parent=CGI_10003526;
	scaffold292	WUBlastX	DNA_Harbinger	23605	23844	22	+	.	.
scaffold292	subtractBed	intrn	34382	35112	.	+	.	Parent=CGI_10003527;
	scaffold292	TRF	Tandem_Repeat	34382	35112	534	+	.	.
scaffold292	subtractBed	intrn	37904	38086	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	37904	38086	28	+	.	.
scaffold292	subtractBed	intrn	37402	37758	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	37402	37758	171	+	.	.
scaffold292	subtractBed	intrn	37091	37468	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	37091	37468	140	+	.	.
scaffold292	subtractBed	intrn	38110	38349	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	38110	38349	166	+	.	.
scaffold292	subtractBed	intrn	38059	38349	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	38059	38349	116	+	.	.
scaffold292	subtractBed	intrn	37940	38083	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	37940	38083	63	+	.	.
scaffold292	subtractBed	intrn	37462	37749	.	+	.	Parent=CGI_10003527;
	scaffold292	WUBlastX	DNA_TcMar-Marin	37462	37749	191	+	.	.
scaffold292	subtractBed	intrn	55425	55521	.	+	.	Parent=CGI_10003529;
	scaffold292	TRF	Tandem_Repeat	55425	55521	85	+	.	.
scaffold292	subtractBed	intrn	55474	55648	.	+	.	Parent=CGI_10003529;
	scaffold292	TRF	Tandem_Repeat	55474	55648	115	+	.	.
scaffold292	subtractBed	intrn	53781	54752	.	+	.	Parent=CGI_10003529;
	scaffold292	WUBlastX	DNA_TcMar-Tc1	53781	54752	386	+	.	.
scaffold292	subtractBed	intrn	54417	54845	.	+	.	Parent=CGI_10003529;
	scaffold292	WUBlastX	DNA_TcMar-Stowa	54417	54845	34	+	.	.
scaffold292	subtractBed	intrn	65904	65983	.	+	.	Parent=CGI_10003529;
	scaffold292	TRF	Tandem_Repeat	65904	65983	151	+	.	.
scaffold294	subtractBed	intrn	52358	52403	.	+	.	Parent=CGI_10010329;
	scaffold294	TRF	Tandem_Repeat	52358	52403	92	+	.	.
scaffold294	subtractBed	intrn	84082	84198	.	-	.	Parent=CGI_10010330;
	scaffold294	WUBlastX	LINE_L1-Tx1	83899	84198	42	-	.	.
scaffold294	subtractBed	intrn	98075	98139	.	+	.	Parent=CGI_10010333;
	scaffold294	TRF	Tandem_Repeat	98075	98139	130	+	.	.
scaffold294	subtractBed	intrn	98181	98211	.	+	.	Parent=CGI_10010333;
	scaffold294	TRF	Tandem_Repeat	98181	98211	62	+	.	.
scaffold294	subtractBed	intrn	135695	136594	.	-	.	Parent=CGI_10010334;
	scaffold294	WUBlastX	LINE_L2	135695	136594	486	-	.	.
scaffold294	subtractBed	intrn	136082	136708	.	-	.	Parent=CGI_10010334;
	scaffold294	WUBlastX	LINE_CR1	136082	136708	56	-	.	.
scaffold294	subtractBed	intrn	154532	154713	.	-	.	Parent=CGI_10010336;
	scaffold294	TRF	Tandem_Repeat	154532	154713	215	+	.	.
scaffold294	subtractBed	intrn	259152	259638	.	+	.	Parent=CGI_10010342;
	scaffold294	TRF	Tandem_Repeat	259152	259638	586	+	.	.
scaffold294	subtractBed	intrn	259152	259638	.	+	.	Parent=CGI_10010342;
	scaffold294	TRF	Tandem_Repeat	259152	259638	653	+	.	.
scaffold29534	subtractBed	intrn	3072	3113	.	-	.	Parent=CGI_10000544;
	scaffold29534	TRF	Tandem_Repeat	3072	3113	57	+	.	.
scaffold29534	subtractBed	intrn	1313	2338	.	-	.	Parent=CGI_10000544;
	scaffold29534	WUBlastX	LINE_RTE-X	1313	2338	253	+	.	.
scaffold29534	subtractBed	intrn	1373	2812	.	-	.	Parent=CGI_10000544;
	scaffold29534	WUBlastX	LINE_RTE-X	1373	2812	158	+	.	.
scaffold29534	subtractBed	intrn	1373	2545	.	-	.	Parent=CGI_10000544;
	scaffold29534	WUBlastX	LINE_RTE-X	1373	2545	228	+	.	.
scaffold29534	subtractBed	intrn	1208	1834	.	-	.	Parent=CGI_10000544;
	scaffold29534	WUBlastX	LINE_L1	1208	1834	30	+	.	.
scaffold29598	subtractBed	intrn	3215	3796	.	-	.	Parent=CGI_10000548;
	scaffold29598	WUBlastX	LINE_RTE-X	3215	3796	412	-	.	.
scaffold29598	subtractBed	intrn	2770	3006	.	-	.	Parent=CGI_10000548;
	scaffold29598	WUBlastX	LINE_RTE-X	2770	3006	135	-	.	.
scaffold29598	subtractBed	intrn	3323	4000	.	-	.	Parent=CGI_10000548;
	scaffold29598	WUBlastX	LINE_L2	3323	4000	49	-	.	.
scaffold296	subtractBed	intrn	16983	17947	.	+	.	Parent=CGI_10011689;
	scaffold296	TRF	Tandem_Repeat	16983	17947	1375	+	.	.
scaffold296	subtractBed	intrn	45132	45330	.	-	.	Parent=CGI_10011690;
	scaffold296	TRF	Tandem_Repeat	45132	45330	265	+	.	.
scaffold296	subtractBed	intrn	56734	56901	.	-	.	Parent=CGI_10011690;
	scaffold296	WUBlastX	DNA_hAT-Ac	56734	56901	89	-	.	.
scaffold296	subtractBed	intrn	56909	57283	.	-	.	Parent=CGI_10011690;
	scaffold296	WUBlastX	DNA_hAT-Ac	56909	57283	48	-	.	.
scaffold296	subtractBed	intrn	91024	91270	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	91024	91270	234	+	.	.
scaffold296	subtractBed	intrn	92786	92832	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	92786	92832	94	+	.	.
scaffold296	subtractBed	intrn	96598	96663	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	96598	96663	87	+	.	.
scaffold296	subtractBed	intrn	99945	99979	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	99945	99979	70	+	.	.
scaffold296	subtractBed	intrn	100716	100775	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	100716	100775	84	+	.	.
scaffold296	subtractBed	intrn	100716	100775	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	100716	100775	102	+	.	.
scaffold296	subtractBed	intrn	101016	101055	.	+	.	Parent=CGI_10011693;
	scaffold296	TRF	Tandem_Repeat	101016	101055	80	+	.	.
scaffold296	subtractBed	intrn	238422	240209	.	-	.	Parent=CGI_10011701;
	scaffold296	WUBlastX	LINE_RTE-X	238422	240209	495	-	.	.
scaffold296	subtractBed	intrn	245057	245473	.	-	.	Parent=CGI_10011701;
	scaffold296	WUBlastX	LINE_L2	245057	245473	264	+	.	.
scaffold296	subtractBed	intrn	265272	265310	.	-	.	Parent=CGI_10011702;
	scaffold296	TRF	Tandem_Repeat	265272	265310	60	+	.	.
scaffold296	subtractBed	intrn	282029	282067	.	-	.	Parent=CGI_10011702;
	scaffold296	TRF	Tandem_Repeat	282029	282067	78	+	.	.
scaffold298	subtractBed	intrn	3696	3731	.	+	.	Parent=CGI_10018814;
	scaffold298	TRF	Tandem_Repeat	3696	3731	72	+	.	.
scaffold298	subtractBed	intrn	12545	15604	.	-	.	Parent=CGI_10018816;
	scaffold298	WUBlastX	DNA_Maverick	12545	15604	2229	-	.	.
scaffold298	subtractBed	intrn	13616	16006	.	-	.	Parent=CGI_10018816;
	scaffold298	WUBlastX	DNA_Maverick	13616	16006	1306	-	.	.
scaffold298	subtractBed	intrn	67445	67584	.	+	.	Parent=CGI_10018818;
	scaffold298	TRF	Tandem_Repeat	67445	67584	135	+	.	.
scaffold298	subtractBed	intrn	75520	75579	.	-	.	Parent=CGI_10018820;
	scaffold298	TRF	Tandem_Repeat	75520	75579	120	+	.	.
scaffold298	subtractBed	intrn	76640	76722	.	-	.	Parent=CGI_10018820;
	scaffold298	TRF	Tandem_Repeat	76640	76722	166	+	.	.
scaffold298	subtractBed	intrn	79287	79973	.	-	.	Parent=CGI_10018820;
	scaffold298	TRF	Tandem_Repeat	79287	79973	990	+	.	.
scaffold298	subtractBed	intrn	80247	80321	.	-	.	Parent=CGI_10018820;
	scaffold298	TRF	Tandem_Repeat	80247	80321	141	+	.	.
scaffold298	subtractBed	intrn	137646	137689	.	+	.	Parent=CGI_10018821;
	scaffold298	TRF	Tandem_Repeat	137646	137689	88	+	.	.
scaffold298	subtractBed	intrn	140456	140558	.	+	.	Parent=CGI_10018821;
	scaffold298	TRF	Tandem_Repeat	140456	140558	87	+	.	.
scaffold298	subtractBed	intrn	140385	140635	.	+	.	Parent=CGI_10018821;
	scaffold298	TRF	Tandem_Repeat	140385	140635	202	+	.	.
scaffold298	subtractBed	intrn	140536	140717	.	+	.	Parent=CGI_10018821;
	scaffold298	TRF	Tandem_Repeat	140536	140717	123	+	.	.
scaffold298	subtractBed	intrn	279781	279837	.	-	.	Parent=CGI_10018823;
	scaffold298	TRF	Tandem_Repeat	279781	279837	114	+	.	.
scaffold298	subtractBed	intrn	277879	278697	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	277879	278697	433	-	.	.
scaffold298	subtractBed	intrn	277708	278682	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	277708	278682	169	-	.	.
scaffold298	subtractBed	intrn	281889	281989	.	-	.	Parent=CGI_10018823;
	scaffold298	TRF	Tandem_Repeat	281889	281989	202	+	.	.
scaffold298	subtractBed	intrn	281290	281688	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	281290	281688	109	-	.	.
scaffold298	subtractBed	intrn	281081	281422	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	281042	281422	33	-	.	.
scaffold298	subtractBed	intrn	281365	281703	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	281365	281703	147	-	.	.
scaffold298	subtractBed	intrn	281371	281655	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy-Cigr	281371	281655	151	-	.	.
scaffold298	subtractBed	intrn	281144	281383	.	-	.	Parent=CGI_10018823;
	scaffold298	WUBlastX	LTR_Gypsy	281144	281383	80	-	.	.
scaffold298	subtractBed	intrn	298574	298617	.	-	.	Parent=CGI_10018824;
	scaffold298	TRF	Tandem_Repeat	298574	298617	88	+	.	.
scaffold298	subtractBed	intrn	307965	308012	.	-	.	Parent=CGI_10018824;
	scaffold298	TRF	Tandem_Repeat	307965	308012	96	+	.	.
scaffold298	subtractBed	intrn	299175	299453	.	-	.	Parent=CGI_10018824;
	scaffold298	WUBlastX	LTR_Ngaro	299175	299453	123	+	.	.
scaffold298	subtractBed	intrn	299124	299459	.	-	.	Parent=CGI_10018824;
	scaffold298	WUBlastX	LTR_Ngaro	299124	299459	92	+	.	.
scaffold298	subtractBed	intrn	299028	299453	.	-	.	Parent=CGI_10018824;
	scaffold298	WUBlastX	LTR_Ngaro	299028	299453	79	+	.	.
scaffold298	subtractBed	intrn	370071	370105	.	-	.	Parent=CGI_10018828;
	scaffold298	TRF	Tandem_Repeat	370071	370105	70	+	.	.
scaffold298	subtractBed	intrn	438059	439130	.	-	.	Parent=CGI_10018831;
	scaffold298	TRF	Tandem_Repeat	438059	439130	1545	+	.	.
scaffold298	subtractBed	intrn	452298	452423	.	+	.	Parent=CGI_10018832;
	scaffold298	WUBlastX	DNA_IS4EU	452298	452423	24	+	.	.
scaffold298	subtractBed	intrn	477248	477276	.	-	.	Parent=CGI_10018835;
	scaffold298	TRF	Tandem_Repeat	477248	477276	58	+	.	.
scaffold298	subtractBed	intrn	477276	477320	.	-	.	Parent=CGI_10018835;
	scaffold298	TRF	Tandem_Repeat	477276	477320	90	+	.	.
scaffold298	subtractBed	intrn	483492	483566	.	-	.	Parent=CGI_10018835;
	scaffold298	TRF	Tandem_Repeat	483492	483566	141	+	.	.
scaffold298	subtractBed	intrn	506243	506284	.	+	.	Parent=CGI_10018836;
	scaffold298	TRF	Tandem_Repeat	506243	506284	84	+	.	.
scaffold298	subtractBed	intrn	518895	519536	.	+	.	Parent=CGI_10018836;
	scaffold298	WUBlastX	LINE_L2	518895	519536	108	+	.	.
scaffold298	subtractBed	intrn	519156	519536	.	+	.	Parent=CGI_10018836;
	scaffold298	WUBlastX	LINE_L2	519156	519536	170	+	.	.
scaffold298	subtractBed	intrn	533899	533974	.	+	.	Parent=CGI_10018837;
	scaffold298	TRF	Tandem_Repeat	533899	533974	73	+	.	.
scaffold298	subtractBed	intrn	544151	544260	.	-	.	Parent=CGI_10018838;
	scaffold298	TRF	Tandem_Repeat	544151	544260	220	+	.	.
scaffold298	subtractBed	intrn	546958	547000	.	-	.	Parent=CGI_10018838;
	scaffold298	TRF	Tandem_Repeat	546958	547000	86	+	.	.
scaffold298	subtractBed	intrn	555266	555429	.	-	.	Parent=CGI_10018839;
	scaffold298	TRF	Tandem_Repeat	555266	555429	238	+	.	.
scaffold298	subtractBed	intrn	555726	555754	.	-	.	Parent=CGI_10018839;
	scaffold298	TRF	Tandem_Repeat	555726	555754	58	+	.	.
scaffold298	subtractBed	intrn	561501	561542	.	-	.	Parent=CGI_10018839;
	scaffold298	TRF	Tandem_Repeat	561501	561542	59	+	.	.
scaffold3	subtractBed	intrn	34362	34427	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	34362	34427	53	+	.	.
scaffold3	subtractBed	intrn	34362	34427	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	34362	34427	64	+	.	.
scaffold3	subtractBed	intrn	38305	38371	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	38305	38371	89	+	.	.
scaffold3	subtractBed	intrn	50715	51032	.	-	.	Parent=CGI_10027268;
	scaffold3	WUBlastX	LINE_RTE-X	50715	51032	32	+	.	.
scaffold3	subtractBed	intrn	50817	51062	.	-	.	Parent=CGI_10027268;
	scaffold3	WUBlastX	LINE_RTE-X	50817	51062	81	+	.	.
scaffold3	subtractBed	intrn	50769	51032	.	-	.	Parent=CGI_10027268;
	scaffold3	WUBlastX	LINE_RTE-X	50769	51032	71	+	.	.
scaffold3	subtractBed	intrn	56926	56974	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	56926	56974	73	+	.	.
scaffold3	subtractBed	intrn	56926	56968	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	56926	56968	59	+	.	.
scaffold3	subtractBed	intrn	60044	60107	.	-	.	Parent=CGI_10027268;
	scaffold3	TRF	Tandem_Repeat	60044	60107	76	+	.	.
scaffold3	subtractBed	intrn	50715	51032	.	+	.	Parent=CGI_10027269;
	scaffold3	WUBlastX	LINE_RTE-X	50715	51032	32	+	.	.
scaffold3	subtractBed	intrn	50817	51062	.	+	.	Parent=CGI_10027269;
	scaffold3	WUBlastX	LINE_RTE-X	50817	51062	81	+	.	.
scaffold3	subtractBed	intrn	50769	51032	.	+	.	Parent=CGI_10027269;
	scaffold3	WUBlastX	LINE_RTE-X	50769	51032	71	+	.	.
scaffold3	subtractBed	intrn	66365	66445	.	-	.	Parent=CGI_10027271;
	scaffold3	TRF	Tandem_Repeat	66365	66445	74	+	.	.
scaffold3	subtractBed	intrn	110440	110940	.	-	.	Parent=CGI_10027273;
	scaffold3	WUBlastX	LINE_L2	110440	110940	347	+	.	.
scaffold3	subtractBed	intrn	116932	117657	.	+	.	Parent=CGI_10027276;
	scaffold3	WUBlastX	LINE_L1-Tx1	116932	117657	64	+	.	.
scaffold3	subtractBed	intrn	116935	117486	.	+	.	Parent=CGI_10027276;
	scaffold3	WUBlastX	LINE_L1	116935	117486	77	+	.	.
scaffold3	subtractBed	intrn	142582	142778	.	+	.	Parent=CGI_10027280;
	scaffold3	TRF	Tandem_Repeat	142582	142778	148	+	.	.
scaffold3	subtractBed	intrn	143472	143678	.	+	.	Parent=CGI_10027280;
	scaffold3	WUBlastX	LINE_RTE-X	143472	143678	40	-	.	.
scaffold3	subtractBed	intrn	143391	143678	.	+	.	Parent=CGI_10027280;
	scaffold3	WUBlastX	LINE_RTE-X	143391	143678	31	-	.	.
scaffold3	subtractBed	intrn	143520	143714	.	+	.	Parent=CGI_10027280;
	scaffold3	WUBlastX	LINE_RTE-X	143520	143714	46	-	.	.
scaffold3	subtractBed	intrn	168049	168080	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	168049	168080	57	+	.	.
scaffold3	subtractBed	intrn	168106	168158	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	168106	168158	97	+	.	.
scaffold3	subtractBed	intrn	188565	188590	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	188565	188590	52	+	.	.
scaffold3	subtractBed	intrn	191721	191754	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	191721	191754	68	+	.	.
scaffold3	subtractBed	intrn	191986	192022	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	191986	192022	74	+	.	.
scaffold3	subtractBed	intrn	193710	193771	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	193710	193771	110	+	.	.
scaffold3	subtractBed	intrn	197002	197079	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	197002	197079	126	+	.	.
scaffold3	subtractBed	intrn	197198	197231	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	197198	197231	59	+	.	.
scaffold3	subtractBed	intrn	206573	206706	.	-	.	Parent=CGI_10027281;
	scaffold3	TRF	Tandem_Repeat	206573	206706	150	+	.	.
scaffold3	subtractBed	intrn	242227	242268	.	-	.	Parent=CGI_10027283;
	scaffold3	TRF	Tandem_Repeat	242227	242268	75	+	.	.
scaffold3	subtractBed	intrn	260713	260781	.	+	.	Parent=CGI_10027286;
	scaffold3	TRF	Tandem_Repeat	260713	260781	129	+	.	.
scaffold3	subtractBed	intrn	289380	289703	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok-Hyd	289380	289703	33	-	.	.
scaffold3	subtractBed	intrn	289401	289737	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok	289401	289895	23	-	.	.
scaffold3	subtractBed	intrn	289365	289541	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok-Hyd	289365	289541	52	-	.	.
scaffold3	subtractBed	intrn	290385	290417	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok-Hyd	290385	290438	25	-	.	.
scaffold3	subtractBed	intrn	289797	289895	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok	289401	289895	23	-	.	.
scaffold3	subtractBed	intrn	289961	290182	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok-Hyd	289961	290182	38	-	.	.
scaffold3	subtractBed	intrn	290346	290417	.	-	.	Parent=CGI_10027289;
	scaffold3	WUBlastX	DNA_Kolobok-Hyd	290346	290435	20	-	.	.
scaffold3	subtractBed	intrn	326595	326671	.	-	.	Parent=CGI_10027290;
	scaffold3	TRF	Tandem_Repeat	326595	326671	127	+	.	.
scaffold3	subtractBed	intrn	368083	368128	.	-	.	Parent=CGI_10027291;
	scaffold3	TRF	Tandem_Repeat	368083	368128	92	+	.	.
scaffold3	subtractBed	intrn	369630	370046	.	-	.	Parent=CGI_10027291;
	scaffold3	WUBlastX	LINE_L1-Tx1	369630	370046	50	-	.	.
scaffold3	subtractBed	intrn	369660	369944	.	-	.	Parent=CGI_10027291;
	scaffold3	WUBlastX	LINE_L1-Tx1	369660	369944	78	-	.	.
scaffold3	subtractBed	intrn	422575	423260	.	+	.	Parent=CGI_10027292;
	scaffold3	TRF	Tandem_Repeat	422575	423260	984	+	.	.
scaffold3	subtractBed	intrn	490964	491031	.	-	.	Parent=CGI_10027293;
	scaffold3	TRF	Tandem_Repeat	490964	491031	122	+	.	.
scaffold3	subtractBed	intrn	491997	492049	.	-	.	Parent=CGI_10027293;
	scaffold3	TRF	Tandem_Repeat	491997	492049	88	+	.	.
scaffold3	subtractBed	intrn	670070	670291	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_L2	670070	670291	64	+	.	.
scaffold3	subtractBed	intrn	670070	670255	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_CR1-L2	670070	670255	109	+	.	.
scaffold3	subtractBed	intrn	670386	670589	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_CR1-L2	670386	670589	35	+	.	.
scaffold3	subtractBed	intrn	670597	670857	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_RTE-X	670597	670857	33	+	.	.
scaffold3	subtractBed	intrn	670386	670511	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_CR1-L2	670386	670511	40	+	.	.
scaffold3	subtractBed	intrn	670243	670773	.	+	.	Parent=CGI_10027296;
	scaffold3	WUBlastX	LINE_CR1-L2	670243	670773	30	+	.	.
scaffold3	subtractBed	intrn	687521	687553	.	-	.	Parent=CGI_10027297;
	scaffold3	TRF	Tandem_Repeat	687521	687553	66	+	.	.
scaffold3	subtractBed	intrn	692643	692674	.	-	.	Parent=CGI_10027297;
	scaffold3	TRF	Tandem_Repeat	692643	692674	64	+	.	.
scaffold3	subtractBed	intrn	697113	697926	.	+	.	Parent=CGI_10027298;
	scaffold3	TRF	Tandem_Repeat	697113	697926	1161	+	.	.
scaffold3	subtractBed	intrn	740874	740898	.	-	.	Parent=CGI_10027299;
	scaffold3	TRF	Tandem_Repeat	740874	740898	50	+	.	.
scaffold3	subtractBed	intrn	742359	742432	.	-	.	Parent=CGI_10027299;
	scaffold3	TRF	Tandem_Repeat	742359	742432	139	+	.	.
scaffold3	subtractBed	intrn	790174	790251	.	+	.	Parent=CGI_10027302;
	scaffold3	WUBlastX	LTR_Pao	790174	790614	53	+	.	.
scaffold3	subtractBed	intrn	805736	805894	.	+	.	Parent=CGI_10027304;
	scaffold3	WUBlastX	LINE_L1-Tx1	805736	805894	23	+	.	.
scaffold3	subtractBed	intrn	806169	806294	.	+	.	Parent=CGI_10027304;
	scaffold3	WUBlastX	LINE_L1	806169	806294	46	+	.	.
scaffold3	subtractBed	intrn	805839	806372	.	+	.	Parent=CGI_10027304;
	scaffold3	WUBlastX	LINE_L1	805839	806372	36	+	.	.
scaffold3	subtractBed	intrn	866168	866894	.	-	.	Parent=CGI_10027308;
	scaffold3	TRF	Tandem_Repeat	866168	866894	1027	+	.	.
scaffold3	subtractBed	intrn	890432	891033	.	-	.	Parent=CGI_10027310;
	scaffold3	TRF	Tandem_Repeat	890432	891033	870	+	.	.
scaffold3	subtractBed	intrn	927185	927281	.	+	.	Parent=CGI_10027315;
	scaffold3	TRF	Tandem_Repeat	927185	927281	185	+	.	.
scaffold3	subtractBed	intrn	927185	927279	.	+	.	Parent=CGI_10027315;
	scaffold3	TRF	Tandem_Repeat	927185	927279	153	+	.	.
scaffold3	subtractBed	intrn	929891	930063	.	+	.	Parent=CGI_10027315;
	scaffold3	TRF	Tandem_Repeat	929891	930063	211	+	.	.
scaffold3	subtractBed	intrn	929891	930062	.	+	.	Parent=CGI_10027315;
	scaffold3	TRF	Tandem_Repeat	929891	930062	208	+	.	.
scaffold3	subtractBed	intrn	937583	937666	.	+	.	Parent=CGI_10027315;
	scaffold3	TRF	Tandem_Repeat	937583	937666	168	+	.	.
scaffold3	subtractBed	intrn	948886	949593	.	+	.	Parent=CGI_10027316;
	scaffold3	WUBlastX	LTR_Ngaro	948886	949593	185	+	.	.
scaffold3	subtractBed	intrn	949003	949599	.	+	.	Parent=CGI_10027316;
	scaffold3	WUBlastX	LTR_Ngaro	949003	949599	265	+	.	.
scaffold3	subtractBed	intrn	951950	951975	.	+	.	Parent=CGI_10027316;
	scaffold3	TRF	Tandem_Repeat	951950	951975	52	+	.	.
scaffold3	subtractBed	intrn	973297	973938	.	+	.	Parent=CGI_10027317;
	scaffold3	WUBlastX	LTR_Ngaro	973297	973938	146	-	.	.
scaffold3	subtractBed	intrn	974350	974796	.	+	.	Parent=CGI_10027317;
	scaffold3	WUBlastX	LTR_Ngaro	974350	974796	97	-	.	.
scaffold3	subtractBed	intrn	972496	973029	.	+	.	Parent=CGI_10027317;
	scaffold3	WUBlastX	LTR_Ngaro	972496	973029	139	-	.	.
scaffold3	subtractBed	intrn	973294	974598	.	+	.	Parent=CGI_10027317;
	scaffold3	WUBlastX	LTR_Ngaro	973294	974598	116	-	.	.
scaffold3	subtractBed	intrn	972956	973357	.	+	.	Parent=CGI_10027317;
	scaffold3	WUBlastX	LTR_Ngaro	972956	973357	23	-	.	.
scaffold3	subtractBed	intrn	1093593	1093617	.	+	.	Parent=CGI_10027323;
	scaffold3	TRF	Tandem_Repeat	1093593	1093617	50	+	.	.
scaffold3	subtractBed	intrn	1153989	1154112	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1153989	1154112	77	+	.	.
scaffold3	subtractBed	intrn	1159646	1159712	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1159646	1159712	80	+	.	.
scaffold3	subtractBed	intrn	1162285	1162331	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1162285	1162331	94	+	.	.
scaffold3	subtractBed	intrn	1162521	1162570	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1162521	1162570	55	+	.	.
scaffold3	subtractBed	intrn	1162541	1162570	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1162541	1162570	51	+	.	.
scaffold3	subtractBed	intrn	1162521	1162570	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1162521	1162570	55	+	.	.
scaffold3	subtractBed	intrn	1163065	1163131	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1163065	1163131	71	+	.	.
scaffold3	subtractBed	intrn	1170375	1170403	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1170375	1170403	58	+	.	.
scaffold3	subtractBed	intrn	1170698	1170724	.	-	.	Parent=CGI_10027327;
	scaffold3	TRF	Tandem_Repeat	1170698	1170724	54	+	.	.
scaffold3	subtractBed	intrn	1185043	1185155	.	+	.	Parent=CGI_10027328;
	scaffold3	TRF	Tandem_Repeat	1185043	1185155	65	+	.	.
scaffold3	subtractBed	intrn	1185276	1186205	.	+	.	Parent=CGI_10027328;
	scaffold3	TRF	Tandem_Repeat	1185276	1186205	1370	+	.	.
scaffold3	subtractBed	intrn	1240390	1240453	.	+	.	Parent=CGI_10027329;
	scaffold3	TRF	Tandem_Repeat	1240390	1240453	53	+	.	.
scaffold3	subtractBed	intrn	1249317	1249401	.	-	.	Parent=CGI_10027330;
	scaffold3	TRF	Tandem_Repeat	1249317	1249401	170	+	.	.
scaffold3	subtractBed	intrn	1251428	1251557	.	-	.	Parent=CGI_10027330;
	scaffold3	TRF	Tandem_Repeat	1251428	1251557	63	+	.	.
scaffold3	subtractBed	intrn	1251435	1251556	.	-	.	Parent=CGI_10027330;
	scaffold3	TRF	Tandem_Repeat	1251435	1251556	82	+	.	.
scaffold3	subtractBed	intrn	1252546	1252608	.	-	.	Parent=CGI_10027330;
	scaffold3	TRF	Tandem_Repeat	1252546	1252608	57	+	.	.
scaffold3	subtractBed	intrn	1252557	1252671	.	-	.	Parent=CGI_10027330;
	scaffold3	TRF	Tandem_Repeat	1252557	1252671	59	+	.	.
scaffold3	subtractBed	intrn	1314969	1315355	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1314969	1315355	171	-	.	.
scaffold3	subtractBed	intrn	1315370	1315882	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1315370	1315882	128	-	.	.
scaffold3	subtractBed	intrn	1315938	1316159	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1315938	1316159	115	-	.	.
scaffold3	subtractBed	intrn	1315852	1316739	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1315852	1316739	69	-	.	.
scaffold3	subtractBed	intrn	1316434	1316787	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1316434	1316787	143	-	.	.
scaffold3	subtractBed	intrn	1316759	1317388	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1316759	1317388	283	-	.	.
scaffold3	subtractBed	intrn	1317717	1317779	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1317717	1317779	26	-	.	.
scaffold3	subtractBed	intrn	1317781	1318104	.	-	.	Parent=CGI_10027337;
	scaffold3	WUBlastX	LTR_Ngaro	1317781	1318104	102	-	.	.
scaffold301	subtractBed	intrn	61520	61550	.	-	.	Parent=CGI_10026708;
	scaffold301	TRF	Tandem_Repeat	61520	61550	62	+	.	.
scaffold301	subtractBed	intrn	97386	97443	.	-	.	Parent=CGI_10026709;
	scaffold301	TRF	Tandem_Repeat	97386	97443	116	+	.	.
scaffold301	subtractBed	intrn	254947	254995	.	+	.	Parent=CGI_10026712;
	scaffold301	TRF	Tandem_Repeat	254947	254995	98	+	.	.
scaffold301	subtractBed	intrn	255856	255967	.	+	.	Parent=CGI_10026712;
	scaffold301	TRF	Tandem_Repeat	255856	255967	162	+	.	.
scaffold301	subtractBed	intrn	259544	259575	.	+	.	Parent=CGI_10026712;
	scaffold301	TRF	Tandem_Repeat	259544	259575	64	+	.	.
scaffold301	subtractBed	intrn	260539	260582	.	+	.	Parent=CGI_10026712;
	scaffold301	TRF	Tandem_Repeat	260539	260582	88	+	.	.
scaffold301	subtractBed	intrn	342331	342356	.	+	.	Parent=CGI_10026716;
	scaffold301	TRF	Tandem_Repeat	342331	342356	52	+	.	.
scaffold301	subtractBed	intrn	344809	344850	.	+	.	Parent=CGI_10026717;
	scaffold301	TRF	Tandem_Repeat	344809	344850	84	+	.	.
scaffold301	subtractBed	intrn	376423	376448	.	+	.	Parent=CGI_10026719;
	scaffold301	TRF	Tandem_Repeat	376423	376448	52	+	.	.
scaffold301	subtractBed	intrn	388407	388475	.	+	.	Parent=CGI_10026720;
	scaffold301	TRF	Tandem_Repeat	388407	388475	86	+	.	.
scaffold301	subtractBed	intrn	394959	395792	.	+	.	Parent=CGI_10026720;
	scaffold301	WUBlastX	LINE_RTE-X	394959	395792	170	-	.	.
scaffold301	subtractBed	intrn	395957	397165	.	+	.	Parent=CGI_10026720;
	scaffold301	WUBlastX	LINE_Jockey	395957	397165	71	-	.	.
scaffold301	subtractBed	intrn	395780	396844	.	+	.	Parent=CGI_10026720;
	scaffold301	WUBlastX	LINE_RTE-X	395780	396844	632	-	.	.
scaffold301	subtractBed	intrn	417960	418008	.	+	.	Parent=CGI_10026721;
	scaffold301	TRF	Tandem_Repeat	417960	418008	98	+	.	.
scaffold301	subtractBed	intrn	419397	419443	.	+	.	Parent=CGI_10026721;
	scaffold301	TRF	Tandem_Repeat	419397	419443	94	+	.	.
scaffold301	subtractBed	intrn	425481	425532	.	+	.	Parent=CGI_10026721;
	scaffold301	TRF	Tandem_Repeat	425481	425532	95	+	.	.
scaffold301	subtractBed	intrn	427392	427423	.	+	.	Parent=CGI_10026721;
	scaffold301	TRF	Tandem_Repeat	427392	427423	55	+	.	.
scaffold301	subtractBed	intrn	737561	737642	.	-	.	Parent=CGI_10026727;
	scaffold301	TRF	Tandem_Repeat	737561	737642	92	+	.	.
scaffold301	subtractBed	intrn	761288	761333	.	-	.	Parent=CGI_10026729;
	scaffold301	TRF	Tandem_Repeat	761288	761333	74	+	.	.
scaffold301	subtractBed	intrn	762599	762639	.	-	.	Parent=CGI_10026729;
	scaffold301	TRF	Tandem_Repeat	762599	762639	82	+	.	.
scaffold301	subtractBed	intrn	764350	764816	.	-	.	Parent=CGI_10026729;
	scaffold301	TRF	Tandem_Repeat	764350	764816	637	+	.	.
scaffold301	subtractBed	intrn	774340	774379	.	-	.	Parent=CGI_10026730;
	scaffold301	TRF	Tandem_Repeat	774340	774379	80	+	.	.
scaffold301	subtractBed	intrn	835845	836097	.	-	.	Parent=CGI_10026732;
	scaffold301	TRF	Tandem_Repeat	835845	836097	316	+	.	.
scaffold301	subtractBed	intrn	835547	835843	.	-	.	Parent=CGI_10026732;
	scaffold301	TRF	Tandem_Repeat	835547	835843	462	+	.	.
scaffold301	subtractBed	intrn	835547	836097	.	-	.	Parent=CGI_10026732;
	scaffold301	TRF	Tandem_Repeat	835547	836097	726	+	.	.
scaffold301	subtractBed	intrn	835547	836097	.	-	.	Parent=CGI_10026732;
	scaffold301	TRF	Tandem_Repeat	835547	836097	683	+	.	.
scaffold301	subtractBed	intrn	937252	937294	.	-	.	Parent=CGI_10026737;
	scaffold301	TRF	Tandem_Repeat	937252	937294	86	+	.	.
scaffold301	subtractBed	intrn	938143	938181	.	-	.	Parent=CGI_10026737;
	scaffold301	TRF	Tandem_Repeat	938143	938181	78	+	.	.
scaffold301	subtractBed	intrn	940049	940101	.	-	.	Parent=CGI_10026737;
	scaffold301	TRF	Tandem_Repeat	940049	940101	61	+	.	.
scaffold301	subtractBed	intrn	946779	947378	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	946779	947378	69	-	.	.
scaffold301	subtractBed	intrn	946578	947273	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	946578	947273	199	-	.	.
scaffold301	subtractBed	intrn	946686	947285	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	946686	947285	229	-	.	.
scaffold301	subtractBed	intrn	950913	950955	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	950913	951134	24	-	.	.
scaffold301	subtractBed	intrn	951137	951137	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	950973	951137	27	-	.	.
scaffold301	subtractBed	intrn	951253	951257	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951253	951420	61	-	.	.
scaffold301	subtractBed	intrn	951256	951257	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951256	951522	23	-	.	.
scaffold301	subtractBed	intrn	951223	951257	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951223	951426	36	-	.	.
scaffold301	subtractBed	intrn	951420	951420	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951253	951420	61	-	.	.
scaffold301	subtractBed	intrn	951533	951543	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951533	951730	127	-	.	.
scaffold301	subtractBed	intrn	951420	951522	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951256	951522	23	-	.	.
scaffold301	subtractBed	intrn	951420	951426	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951223	951426	36	-	.	.
scaffold301	subtractBed	intrn	956451	956461	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	956451	956660	59	-	.	.
scaffold301	subtractBed	intrn	951610	951730	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	951533	951730	127	-	.	.
scaffold301	subtractBed	intrn	952012	953301	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	952012	953301	619	-	.	.
scaffold301	subtractBed	intrn	956644	956660	.	-	.	Parent=CGI_10026737;
	scaffold301	WUBlastX	DNA_Sola	956451	956660	59	-	.	.
scaffold301	subtractBed	intrn	1029505	1029624	.	-	.	Parent=CGI_10026739;
	scaffold301	TRF	Tandem_Repeat	1029505	1029624	168	+	.	.
scaffold301	subtractBed	intrn	1032024	1032070	.	-	.	Parent=CGI_10026739;
	scaffold301	TRF	Tandem_Repeat	1032024	1032070	85	+	.	.
scaffold301	subtractBed	intrn	1086542	1086867	.	-	.	Parent=CGI_10026743;
	scaffold301	TRF	Tandem_Repeat	1086542	1086867	512	+	.	.
scaffold301	subtractBed	intrn	1126021	1126089	.	-	.	Parent=CGI_10026744;
	scaffold301	TRF	Tandem_Repeat	1126021	1126089	129	+	.	.
scaffold301	subtractBed	intrn	1151695	1152015	.	-	.	Parent=CGI_10026748;
	scaffold301	TRF	Tandem_Repeat	1151695	1152015	383	+	.	.
scaffold301	subtractBed	intrn	1151696	1152022	.	-	.	Parent=CGI_10026748;
	scaffold301	TRF	Tandem_Repeat	1151696	1152022	431	+	.	.
scaffold301	subtractBed	intrn	1175972	1176016	.	-	.	Parent=CGI_10026750;
	scaffold301	TRF	Tandem_Repeat	1175972	1176016	90	+	.	.
scaffold301	subtractBed	intrn	1189205	1189340	.	-	.	Parent=CGI_10026751;
	scaffold301	TRF	Tandem_Repeat	1189205	1189340	163	+	.	.
scaffold301	subtractBed	intrn	1189588	1189666	.	-	.	Parent=CGI_10026751;
	scaffold301	TRF	Tandem_Repeat	1189588	1189666	142	+	.	.
scaffold301	subtractBed	intrn	1189753	1189784	.	-	.	Parent=CGI_10026751;
	scaffold301	TRF	Tandem_Repeat	1189753	1189784	55	+	.	.
scaffold301	subtractBed	intrn	1190527	1190608	.	-	.	Parent=CGI_10026751;
	scaffold301	TRF	Tandem_Repeat	1190527	1190608	103	+	.	.
scaffold302	subtractBed	intrn	7694	7749	.	+	.	Parent=CGI_10002890;
	scaffold302	TRF	Tandem_Repeat	7694	7749	112	+	.	.
scaffold304	subtractBed	intrn	176843	176878	.	-	.	Parent=CGI_10016555;
	scaffold304	TRF	Tandem_Repeat	176843	176878	63	+	.	.
scaffold304	subtractBed	intrn	194702	195161	.	+	.	Parent=CGI_10016556;
	scaffold304	TRF	Tandem_Repeat	194702	195161	832	+	.	.
scaffold304	subtractBed	intrn	251635	251879	.	-	.	Parent=CGI_10016563;
	scaffold304	TRF	Tandem_Repeat	251635	251879	187	+	.	.
scaffold304	subtractBed	intrn	335057	335187	.	-	.	Parent=CGI_10016567;
	scaffold304	TRF	Tandem_Repeat	335057	335187	149	+	.	.
scaffold304	subtractBed	intrn	335427	335600	.	-	.	Parent=CGI_10016567;
	scaffold304	WUBlastX	LINE_L1	335427	335600	81	+	.	.
scaffold304	subtractBed	intrn	333932	334354	.	-	.	Parent=CGI_10016567;
	scaffold304	WUBlastX	LTR_Ngaro	333932	334354	74	+	.	.
scaffold304	subtractBed	intrn	334073	334357	.	-	.	Parent=CGI_10016567;
	scaffold304	WUBlastX	LTR_Ngaro	334073	334357	116	+	.	.
scaffold304	subtractBed	intrn	329100	329300	.	-	.	Parent=CGI_10016567;
	scaffold304	WUBlastX	LINE_RTE-BovB	329100	329300	88	-	.	.
scaffold304	subtractBed	intrn	399321	399382	.	+	.	Parent=CGI_10016569;
	scaffold304	TRF	Tandem_Repeat	399321	399382	124	+	.	.
scaffold304	subtractBed	intrn	399533	399576	.	+	.	Parent=CGI_10016569;
	scaffold304	TRF	Tandem_Repeat	399533	399576	52	+	.	.
scaffold304	subtractBed	intrn	399541	399577	.	+	.	Parent=CGI_10016569;
	scaffold304	TRF	Tandem_Repeat	399541	399577	65	+	.	.
scaffold304	subtractBed	intrn	399850	399992	.	+	.	Parent=CGI_10016569;
	scaffold304	TRF	Tandem_Repeat	399850	399992	124	+	.	.
scaffold304	subtractBed	intrn	399841	399988	.	+	.	Parent=CGI_10016569;
	scaffold304	TRF	Tandem_Repeat	399841	399988	145	+	.	.
scaffold304	subtractBed	intrn	425810	425876	.	+	.	Parent=CGI_10016570;
	scaffold304	TRF	Tandem_Repeat	425810	425876	134	+	.	.
scaffold304	subtractBed	intrn	430428	430484	.	+	.	Parent=CGI_10016570;
	scaffold304	TRF	Tandem_Repeat	430428	430484	114	+	.	.
scaffold304	subtractBed	intrn	444327	444385	.	-	.	Parent=CGI_10016571;
	scaffold304	TRF	Tandem_Repeat	444327	444385	118	+	.	.
scaffold304	subtractBed	intrn	444395	444447	.	-	.	Parent=CGI_10016571;
	scaffold304	TRF	Tandem_Repeat	444395	444447	106	+	.	.
scaffold305	subtractBed	intrn	2167	2655	.	+	.	Parent=CGI_10019108;
	scaffold305	TRF	Tandem_Repeat	2167	2655	691	+	.	.
scaffold305	subtractBed	intrn	37108	37167	.	-	.	Parent=CGI_10019112;
	scaffold305	TRF	Tandem_Repeat	37108	37167	57	+	.	.
scaffold305	subtractBed	intrn	36708	37079	.	-	.	Parent=CGI_10019112;
	scaffold305	WUBlastX	LINE_RTE-X	36708	37079	120	+	.	.
scaffold305	subtractBed	intrn	45223	45258	.	+	.	Parent=CGI_10019113;
	scaffold305	TRF	Tandem_Repeat	45223	45258	72	+	.	.
scaffold305	subtractBed	intrn	117899	118017	.	-	.	Parent=CGI_10019117;
	scaffold305	TRF	Tandem_Repeat	117899	118017	102	+	.	.
scaffold305	subtractBed	intrn	129091	129255	.	-	.	Parent=CGI_10019117;
	scaffold305	WUBlastX	LTR_Gypsy	129091	129255	28	-	.	.
scaffold305	subtractBed	intrn	124324	127791	.	-	.	Parent=CGI_10019117;
	scaffold305	WUBlastX	LTR_Gypsy	124324	127791	2459	-	.	.
scaffold305	subtractBed	intrn	124168	128310	.	-	.	Parent=CGI_10019117;
	scaffold305	WUBlastX	LTR_Gypsy	124168	128310	2394	-	.	.
scaffold305	subtractBed	intrn	128397	129095	.	-	.	Parent=CGI_10019117;
	scaffold305	WUBlastX	LTR_Gypsy-Cigr	128397	129095	202	-	.	.
scaffold305	subtractBed	intrn	132058	132120	.	-	.	Parent=CGI_10019117;
	scaffold305	TRF	Tandem_Repeat	132058	132120	126	+	.	.
scaffold305	subtractBed	intrn	134353	134378	.	-	.	Parent=CGI_10019118;
	scaffold305	TRF	Tandem_Repeat	134353	134378	52	+	.	.
scaffold305	subtractBed	intrn	139200	140600	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1-Tx1	139200	140600	160	+	.	.
scaffold305	subtractBed	intrn	138909	139559	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1-Tx1	138909	139559	97	+	.	.
scaffold305	subtractBed	intrn	139902	140642	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1	139902	140642	263	+	.	.
scaffold305	subtractBed	intrn	140867	141076	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1	140867	141076	47	+	.	.
scaffold305	subtractBed	intrn	140641	140901	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1	140641	140901	74	+	.	.
scaffold305	subtractBed	intrn	141519	141689	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1	141519	141689	22	+	.	.
scaffold305	subtractBed	intrn	140647	140859	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1	140647	140859	92	+	.	.
scaffold305	subtractBed	intrn	141235	141339	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_L1-Tx1	141235	141339	24	+	.	.
scaffold305	subtractBed	intrn	143065	143682	.	-	.	Parent=CGI_10019118;
	scaffold305	WUBlastX	LINE_Penelope	143065	143682	69	-	.	.
scaffold305	subtractBed	intrn	173919	173960	.	-	.	Parent=CGI_10019119;
	scaffold305	TRF	Tandem_Repeat	173919	173960	66	+	.	.
scaffold305	subtractBed	intrn	178543	178896	.	-	.	Parent=CGI_10019119;
	scaffold305	WUBlastX	DNA_hAT-Tip100	178543	178896	21	-	.	.
scaffold305	subtractBed	intrn	178540	178824	.	-	.	Parent=CGI_10019119;
	scaffold305	WUBlastX	DNA_hAT-Tip100	178540	178824	67	-	.	.
scaffold305	subtractBed	intrn	177534	178436	.	-	.	Parent=CGI_10019119;
	scaffold305	WUBlastX	DNA_hAT-Tip100	177534	178436	480	-	.	.
scaffold305	subtractBed	intrn	178439	178552	.	-	.	Parent=CGI_10019119;
	scaffold305	WUBlastX	DNA_hAT-Tip100	178439	178552	21	-	.	.
scaffold305	subtractBed	intrn	178543	178758	.	-	.	Parent=CGI_10019119;
	scaffold305	WUBlastX	DNA_hAT-Tip100	178543	178758	119	-	.	.
scaffold305	subtractBed	intrn	230678	231044	.	+	.	Parent=CGI_10019122;
	scaffold305	TRF	Tandem_Repeat	230678	231044	471	+	.	.
scaffold305	subtractBed	intrn	230674	231050	.	+	.	Parent=CGI_10019122;
	scaffold305	TRF	Tandem_Repeat	230674	231050	431	+	.	.
scaffold305	subtractBed	intrn	231861	232030	.	+	.	Parent=CGI_10019122;
	scaffold305	TRF	Tandem_Repeat	231861	232030	182	+	.	.
scaffold305	subtractBed	intrn	234692	235332	.	+	.	Parent=CGI_10019122;
	scaffold305	TRF	Tandem_Repeat	234692	235332	985	+	.	.
scaffold305	subtractBed	intrn	236762	237862	.	+	.	Parent=CGI_10019123;
	scaffold305	TRF	Tandem_Repeat	236762	237862	2121	+	.	.
scaffold305	subtractBed	intrn	244008	244305	.	+	.	Parent=CGI_10019123;
	scaffold305	TRF	Tandem_Repeat	244008	244351	620	+	.	.
scaffold305	subtractBed	intrn	247782	248077	.	+	.	Parent=CGI_10019123;
	scaffold305	TRF	Tandem_Repeat	247782	248077	529	+	.	.
scaffold305	subtractBed	intrn	257508	257939	.	+	.	Parent=CGI_10019124;
	scaffold305	WUBlastX	LINE_RTE-X	257508	257939	49	+	.	.
scaffold305	subtractBed	intrn	257508	257867	.	+	.	Parent=CGI_10019124;
	scaffold305	WUBlastX	LINE_RTE-X	257508	257867	75	+	.	.
scaffold305	subtractBed	intrn	257523	257807	.	+	.	Parent=CGI_10019124;
	scaffold305	WUBlastX	LINE_RTE-X	257523	257807	112	+	.	.
scaffold305	subtractBed	intrn	275881	276001	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	275881	276001	188	+	.	.
scaffold305	subtractBed	intrn	275866	276011	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	275866	276011	163	+	.	.
scaffold305	subtractBed	intrn	277183	277224	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	277183	277224	84	+	.	.
scaffold305	subtractBed	intrn	278755	278862	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	278755	278862	111	+	.	.
scaffold305	subtractBed	intrn	278745	278846	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	278745	278846	152	+	.	.
scaffold305	subtractBed	intrn	282369	282475	.	-	.	Parent=CGI_10019127;
	scaffold305	TRF	Tandem_Repeat	282369	282475	88	+	.	.
scaffold305	subtractBed	intrn	325026	325114	.	-	.	Parent=CGI_10019131;
	scaffold305	TRF	Tandem_Repeat	325026	325114	171	+	.	.
scaffold305	subtractBed	intrn	329726	330068	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	329726	330068	361	+	.	.
scaffold305	subtractBed	intrn	329726	330068	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	329726	330068	400	+	.	.
scaffold305	subtractBed	intrn	329874	330048	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	329874	330048	171	+	.	.
scaffold305	subtractBed	intrn	335073	335499	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	335073	335499	510	+	.	.
scaffold305	subtractBed	intrn	352047	352269	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	352047	352269	439	+	.	.
scaffold305	subtractBed	intrn	353659	353724	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	353659	353724	60	+	.	.
scaffold305	subtractBed	intrn	354612	354676	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	354612	354676	94	+	.	.
scaffold305	subtractBed	intrn	355567	355725	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	355567	355725	158	+	.	.
scaffold305	subtractBed	intrn	356493	357975	.	+	.	Parent=CGI_10019132;
	scaffold305	TRF	Tandem_Repeat	356493	357975	2570	+	.	.
scaffold305	subtractBed	intrn	375595	375652	.	+	.	Parent=CGI_10019135;
	scaffold305	TRF	Tandem_Repeat	375595	375652	107	+	.	.
scaffold305	subtractBed	intrn	395168	395194	.	-	.	Parent=CGI_10019136;
	scaffold305	TRF	Tandem_Repeat	395168	395194	54	+	.	.
scaffold305	subtractBed	intrn	412444	412760	.	+	.	Parent=CGI_10019138;
	scaffold305	TRF	Tandem_Repeat	412444	412760	338	+	.	.
scaffold305	subtractBed	intrn	418823	418858	.	-	.	Parent=CGI_10019139;
	scaffold305	TRF	Tandem_Repeat	418823	418858	72	+	.	.
scaffold305	subtractBed	intrn	420890	420928	.	-	.	Parent=CGI_10019139;
	scaffold305	TRF	Tandem_Repeat	420890	420928	78	+	.	.
scaffold305	subtractBed	intrn	440183	440227	.	-	.	Parent=CGI_10019140;
	scaffold305	WUBlastX	DNA_MuDR	440183	440494	43	-	.	.
scaffold305	subtractBed	intrn	445064	445090	.	-	.	Parent=CGI_10019140;
	scaffold305	TRF	Tandem_Repeat	445064	445090	54	+	.	.
scaffold305	subtractBed	intrn	443253	443354	.	-	.	Parent=CGI_10019140;
	scaffold305	WUBlastX	DNA_NOF	443253	443354	23	+	.	.
scaffold305	subtractBed	intrn	453477	453522	.	+	.	Parent=CGI_10019141;
	scaffold305	TRF	Tandem_Repeat	453477	453522	92	+	.	.
scaffold305	subtractBed	intrn	460676	460709	.	+	.	Parent=CGI_10019141;
	scaffold305	TRF	Tandem_Repeat	460676	460709	68	+	.	.
scaffold305	subtractBed	intrn	466389	466441	.	+	.	Parent=CGI_10019141;
	scaffold305	TRF	Tandem_Repeat	466389	466441	99	+	.	.
scaffold305	subtractBed	intrn	464358	465029	.	+	.	Parent=CGI_10019141;
	scaffold305	WUBlastX	LINE_L1-Tx1	464358	465029	76	-	.	.
scaffold305	subtractBed	intrn	464703	465023	.	+	.	Parent=CGI_10019141;
	scaffold305	WUBlastX	LINE_L1-Tx1	464703	465023	134	-	.	.
scaffold305	subtractBed	intrn	464990	466078	.	+	.	Parent=CGI_10019141;
	scaffold305	WUBlastX	LINE_L1-Tx1	464990	466078	520	-	.	.
scaffold305	subtractBed	intrn	463758	464045	.	+	.	Parent=CGI_10019141;
	scaffold305	WUBlastX	LINE_L1	463758	464045	20	-	.	.
scaffold30682	subtractBed	intrn	1764	1796	.	-	.	Parent=CGI_10000658;
	scaffold30682	WUBlastX	DNA_Harbinger	1764	2015	62	-	.	.
scaffold30682	subtractBed	intrn	2625	2650	.	-	.	Parent=CGI_10000658;
	scaffold30682	TRF	Tandem_Repeat	2625	2650	52	+	.	.
scaffold30682	subtractBed	intrn	2696	2735	.	-	.	Parent=CGI_10000658;
	scaffold30682	TRF	Tandem_Repeat	2696	2735	80	+	.	.
scaffold30682	subtractBed	intrn	1969	2015	.	-	.	Parent=CGI_10000658;
	scaffold30682	WUBlastX	DNA_Harbinger	1764	2015	62	-	.	.
scaffold30682	subtractBed	intrn	3189	3189	.	-	.	Parent=CGI_10000658;
	scaffold30682	WUBlastX	DNA_Harbinger	3189	3341	71	-	.	.
scaffold308	subtractBed	intrn	102451	102801	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT-Tip100	102451	102801	147	-	.	.
scaffold308	subtractBed	intrn	102734	103567	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT-Tip100	102734	103567	181	-	.	.
scaffold308	subtractBed	intrn	103776	104192	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT-Tip100	103776	104192	159	-	.	.
scaffold308	subtractBed	intrn	103519	103716	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT	103519	103716	100	-	.	.
scaffold308	subtractBed	intrn	102400	102711	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT-Tip100	102400	102711	100	-	.	.
scaffold308	subtractBed	intrn	103710	104438	.	-	.	Parent=CGI_10011007;
	scaffold308	WUBlastX	DNA_hAT-Tip100	103710	104438	141	-	.	.
scaffold308	subtractBed	intrn	107345	107390	.	-	.	Parent=CGI_10011007;
	scaffold308	TRF	Tandem_Repeat	107345	107390	67	+	.	.
scaffold308	subtractBed	intrn	107342	107395	.	-	.	Parent=CGI_10011007;
	scaffold308	TRF	Tandem_Repeat	107342	107395	67	+	.	.
scaffold308	subtractBed	intrn	153641	153681	.	+	.	Parent=CGI_10011010;
	scaffold308	TRF	Tandem_Repeat	153641	153681	82	+	.	.
scaffold30814	subtractBed	intrn	7661	7807	.	-	.	Parent=CGI_10000671;
	scaffold30814	WUBlastX	LINE_RTE-X	7661	7807	69	-	.	.
scaffold30814	subtractBed	intrn	7062	7637	.	-	.	Parent=CGI_10000671;
	scaffold30814	WUBlastX	LINE_RTE-X	7062	7637	101	-	.	.
scaffold30814	subtractBed	intrn	7682	7873	.	-	.	Parent=CGI_10000671;
	scaffold30814	WUBlastX	LINE_RTE-X	7682	7873	45	-	.	.
scaffold309	subtractBed	intrn	30808	30848	.	+	.	Parent=CGI_10007935;
	scaffold309	TRF	Tandem_Repeat	30808	30848	82	+	.	.
scaffold309	subtractBed	intrn	36067	36105	.	+	.	Parent=CGI_10007935;
	scaffold309	TRF	Tandem_Repeat	36067	36105	69	+	.	.
scaffold309	subtractBed	intrn	38758	38792	.	+	.	Parent=CGI_10007935;
	scaffold309	TRF	Tandem_Repeat	38758	38792	52	+	.	.
scaffold309	subtractBed	intrn	178766	178770	.	-	.	Parent=CGI_10007938;
	scaffold309	WUBlastX	LINE_L2	178525	178770	45	-	.	.
scaffold309	subtractBed	intrn	182982	183015	.	+	.	Parent=CGI_10007939;
	scaffold309	TRF	Tandem_Repeat	182982	183015	50	+	.	.
scaffold309	subtractBed	intrn	184855	184915	.	+	.	Parent=CGI_10007939;
	scaffold309	TRF	Tandem_Repeat	184855	184915	106	+	.	.
scaffold309	subtractBed	intrn	186473	186523	.	+	.	Parent=CGI_10007939;
	scaffold309	TRF	Tandem_Repeat	186473	186523	84	+	.	.
scaffold31	subtractBed	intrn	12999	13052	.	-	.	Parent=CGI_10013551;
	scaffold31	TRF	Tandem_Repeat	12999	13052	74	+	.	.
scaffold31	subtractBed	intrn	11350	12948	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L1-Tx1	11350	12948	319	-	.	.
scaffold31	subtractBed	intrn	15327	16022	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L2	15327	16022	114	-	.	.
scaffold31	subtractBed	intrn	15324	15875	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L2	15324	15875	115	-	.	.
scaffold31	subtractBed	intrn	15264	15599	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_RTE-BovB	15264	15599	77	-	.	.
scaffold31	subtractBed	intrn	15375	16096	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L1	15375	16166	40	-	.	.
scaffold31	subtractBed	intrn	14636	14737	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L1-Tx1	14636	14737	32	-	.	.
scaffold31	subtractBed	intrn	14675	14986	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L1-Tx1	14675	14986	164	-	.	.
scaffold31	subtractBed	intrn	14711	15043	.	-	.	Parent=CGI_10013551;
	scaffold31	WUBlastX	LINE_L1-Tx1	14711	15043	36	-	.	.
scaffold31	subtractBed	intrn	91813	91846	.	+	.	Parent=CGI_10013557;
	scaffold31	TRF	Tandem_Repeat	91813	91846	68	+	.	.
scaffold31	subtractBed	intrn	99121	99446	.	+	.	Parent=CGI_10013557;
	scaffold31	TRF	Tandem_Repeat	99121	99446	234	+	.	.
scaffold31	subtractBed	intrn	99121	99492	.	+	.	Parent=CGI_10013557;
	scaffold31	TRF	Tandem_Repeat	99121	99492	575	+	.	.
scaffold31	subtractBed	intrn	131393	131533	.	+	.	Parent=CGI_10013558;
	scaffold31	TRF	Tandem_Repeat	131393	131533	111	+	.	.
scaffold31	subtractBed	intrn	132462	132595	.	+	.	Parent=CGI_10013558;
	scaffold31	TRF	Tandem_Repeat	132462	132595	104	+	.	.
scaffold31	subtractBed	intrn	171382	171487	.	+	.	Parent=CGI_10013560;
	scaffold31	TRF	Tandem_Repeat	171382	171487	51	+	.	.
scaffold31	subtractBed	intrn	171446	171498	.	+	.	Parent=CGI_10013560;
	scaffold31	TRF	Tandem_Repeat	171446	171498	52	+	.	.
scaffold31	subtractBed	intrn	174157	174246	.	+	.	Parent=CGI_10013560;
	scaffold31	TRF	Tandem_Repeat	174157	174246	90	+	.	.
scaffold31	subtractBed	intrn	175966	176058	.	+	.	Parent=CGI_10013560;
	scaffold31	TRF	Tandem_Repeat	175966	176058	96	+	.	.
scaffold31	subtractBed	intrn	171751	172242	.	+	.	Parent=CGI_10013560;
	scaffold31	WUBlastX	LINE_RTE-X	171751	172242	61	-	.	.
scaffold31	subtractBed	intrn	171763	172131	.	+	.	Parent=CGI_10013560;
	scaffold31	WUBlastX	LINE_RTE-X	171763	172131	117	-	.	.
scaffold31	subtractBed	intrn	182071	183089	.	+	.	Parent=CGI_10013560;
	scaffold31	TRF	Tandem_Repeat	182071	183791	1466	+	.	.
scaffold31	subtractBed	intrn	180763	181167	.	+	.	Parent=CGI_10013560;
	scaffold31	WUBlastX	DNA_TcMar-Tc1	180763	181167	88	-	.	.
scaffold31	subtractBed	intrn	181135	181413	.	+	.	Parent=CGI_10013560;
	scaffold31	WUBlastX	DNA_TcMar-Tc1	181135	181413	43	-	.	.
scaffold31	subtractBed	intrn	180766	181050	.	+	.	Parent=CGI_10013560;
	scaffold31	WUBlastX	DNA_TcMar-Tc1	180766	181050	173	-	.	.
scaffold31	subtractBed	intrn	204482	204506	.	-	.	Parent=CGI_10013561;
	scaffold31	TRF	Tandem_Repeat	204482	204506	50	+	.	.
scaffold31	subtractBed	intrn	209131	210144	.	-	.	Parent=CGI_10013561;
	scaffold31	WUBlastX	DNA_Maverick	209131	210144	541	-	.	.
scaffold31	subtractBed	intrn	209048	209113	.	-	.	Parent=CGI_10013561;
	scaffold31	WUBlastX	DNA_Maverick	209048	209113	22	-	.	.
scaffold31	subtractBed	intrn	209063	209113	.	-	.	Parent=CGI_10013561;
	scaffold31	WUBlastX	DNA_Maverick	209063	209113	24	-	.	.
scaffold31090	subtractBed	intrn	7563	7587	.	+	.	Parent=CGI_10000703;
	scaffold31090	TRF	Tandem_Repeat	7563	7587	50	+	.	.
scaffold311	subtractBed	intrn	14830	14866	.	+	.	Parent=CGI_10004623;
	scaffold311	TRF	Tandem_Repeat	14830	14866	74	+	.	.
scaffold311	subtractBed	intrn	14903	14942	.	+	.	Parent=CGI_10004623;
	scaffold311	TRF	Tandem_Repeat	14903	14942	62	+	.	.
scaffold311	subtractBed	intrn	15287	15341	.	+	.	Parent=CGI_10004623;
	scaffold311	TRF	Tandem_Repeat	15287	15341	65	+	.	.
scaffold311	subtractBed	intrn	15396	15467	.	+	.	Parent=CGI_10004623;
	scaffold311	TRF	Tandem_Repeat	15396	15467	144	+	.	.
scaffold311	subtractBed	intrn	21331	21452	.	-	.	Parent=CGI_10004624;
	scaffold311	TRF	Tandem_Repeat	21331	21452	167	+	.	.
scaffold311	subtractBed	intrn	36793	36819	.	-	.	Parent=CGI_10004625;
	scaffold311	TRF	Tandem_Repeat	36793	36819	54	+	.	.
scaffold311	subtractBed	intrn	53535	53624	.	+	.	Parent=CGI_10004626;
	scaffold311	TRF	Tandem_Repeat	53535	53624	99	+	.	.
scaffold311	subtractBed	intrn	57168	57269	.	+	.	Parent=CGI_10004626;
	scaffold311	TRF	Tandem_Repeat	57168	57269	132	+	.	.
scaffold311	subtractBed	intrn	58150	58217	.	+	.	Parent=CGI_10004626;
	scaffold311	TRF	Tandem_Repeat	58150	58217	118	+	.	.
scaffold311	subtractBed	intrn	63660	63691	.	+	.	Parent=CGI_10004626;
	scaffold311	TRF	Tandem_Repeat	63660	63691	64	+	.	.
scaffold311	subtractBed	intrn	80950	80999	.	+	.	Parent=CGI_10004628;
	scaffold311	TRF	Tandem_Repeat	80950	80999	64	+	.	.
scaffold311	subtractBed	intrn	91465	91509	.	-	.	Parent=CGI_10004629;
	scaffold311	TRF	Tandem_Repeat	91465	91509	83	+	.	.
scaffold312	subtractBed	intrn	6645	6693	.	-	.	Parent=CGI_10002621;
	scaffold312	TRF	Tandem_Repeat	6645	6693	52	+	.	.
scaffold313	subtractBed	intrn	114991	115058	.	+	.	Parent=CGI_10026583;
	scaffold313	TRF	Tandem_Repeat	114991	115058	113	+	.	.
scaffold313	subtractBed	intrn	134438	134482	.	-	.	Parent=CGI_10026584;
	scaffold313	WUBlastX	LINE_RTE-X	134297	134482	93	+	.	.
scaffold313	subtractBed	intrn	134438	134446	.	-	.	Parent=CGI_10026584;
	scaffold313	WUBlastX	LINE_RTE-X	134306	134446	95	+	.	.
scaffold313	subtractBed	intrn	134438	134479	.	-	.	Parent=CGI_10026584;
	scaffold313	WUBlastX	LINE_RTE-X	134153	134479	70	+	.	.
scaffold313	subtractBed	intrn	134438	134515	.	-	.	Parent=CGI_10026584;
	scaffold313	WUBlastX	LINE_RTE-X	134315	134515	78	+	.	.
scaffold313	subtractBed	intrn	134438	134557	.	-	.	Parent=CGI_10026584;
	scaffold313	WUBlastX	LINE_RTE-X	134297	134557	77	+	.	.
scaffold313	subtractBed	intrn	154336	155241	.	-	.	Parent=CGI_10026586;
	scaffold313	WUBlastX	LTR_Gypsy	154336	155241	74	-	.	.
scaffold313	subtractBed	intrn	154579	154962	.	-	.	Parent=CGI_10026586;
	scaffold313	WUBlastX	LTR_Gypsy	154579	154962	82	-	.	.
scaffold313	subtractBed	intrn	208448	208473	.	+	.	Parent=CGI_10026588;
	scaffold313	TRF	Tandem_Repeat	208448	208473	52	+	.	.
scaffold313	subtractBed	intrn	210600	210647	.	+	.	Parent=CGI_10026588;
	scaffold313	TRF	Tandem_Repeat	210600	210647	55	+	.	.
scaffold313	subtractBed	intrn	230393	230439	.	+	.	Parent=CGI_10026590;
	scaffold313	TRF	Tandem_Repeat	230393	230439	94	+	.	.
scaffold313	subtractBed	intrn	255376	255891	.	+	.	Parent=CGI_10026593;
	scaffold313	TRF	Tandem_Repeat	255376	255891	622	+	.	.
scaffold313	subtractBed	intrn	255454	255891	.	+	.	Parent=CGI_10026593;
	scaffold313	TRF	Tandem_Repeat	255454	255891	687	+	.	.
scaffold313	subtractBed	intrn	256500	256539	.	+	.	Parent=CGI_10026593;
	scaffold313	TRF	Tandem_Repeat	256500	256539	71	+	.	.
scaffold313	subtractBed	intrn	303856	303906	.	+	.	Parent=CGI_10026596;
	scaffold313	TRF	Tandem_Repeat	303856	303906	95	+	.	.
scaffold313	subtractBed	intrn	307519	307765	.	+	.	Parent=CGI_10026596;
	scaffold313	TRF	Tandem_Repeat	307519	307765	173	+	.	.
scaffold313	subtractBed	intrn	307608	307740	.	+	.	Parent=CGI_10026596;
	scaffold313	TRF	Tandem_Repeat	307608	307740	127	+	.	.
scaffold313	subtractBed	intrn	383772	383996	.	+	.	Parent=CGI_10026599;
	scaffold313	TRF	Tandem_Repeat	383772	383996	227	+	.	.
scaffold313	subtractBed	intrn	394411	394467	.	+	.	Parent=CGI_10026601;
	scaffold313	TRF	Tandem_Repeat	394411	394467	105	+	.	.
scaffold313	subtractBed	intrn	407823	407863	.	+	.	Parent=CGI_10026603;
	scaffold313	TRF	Tandem_Repeat	407823	407863	82	+	.	.
scaffold313	subtractBed	intrn	408652	408696	.	+	.	Parent=CGI_10026603;
	scaffold313	TRF	Tandem_Repeat	408652	408696	81	+	.	.
scaffold313	subtractBed	intrn	410022	410060	.	+	.	Parent=CGI_10026603;
	scaffold313	TRF	Tandem_Repeat	410022	410060	53	+	.	.
scaffold313	subtractBed	intrn	418123	418389	.	+	.	Parent=CGI_10026603;
	scaffold313	WUBlastX	DNA_Harbinger	418123	418389	33	-	.	.
scaffold313	subtractBed	intrn	418418	418702	.	+	.	Parent=CGI_10026603;
	scaffold313	WUBlastX	DNA_Harbinger	418418	418702	56	-	.	.
scaffold313	subtractBed	intrn	428884	428935	.	+	.	Parent=CGI_10026604;
	scaffold313	TRF	Tandem_Repeat	428884	428935	104	+	.	.
scaffold313	subtractBed	intrn	431331	431620	.	+	.	Parent=CGI_10026604;
	scaffold313	TRF	Tandem_Repeat	431331	431620	424	+	.	.
scaffold313	subtractBed	intrn	458787	458838	.	+	.	Parent=CGI_10026606;
	scaffold313	TRF	Tandem_Repeat	458787	458838	104	+	.	.
scaffold313	subtractBed	intrn	473049	473425	.	+	.	Parent=CGI_10026607;
	scaffold313	TRF	Tandem_Repeat	473049	473425	459	+	.	.
scaffold313	subtractBed	intrn	473049	473434	.	+	.	Parent=CGI_10026607;
	scaffold313	TRF	Tandem_Repeat	473049	473434	529	+	.	.
scaffold313	subtractBed	intrn	476063	476638	.	+	.	Parent=CGI_10026607;
	scaffold313	TRF	Tandem_Repeat	476063	476638	640	+	.	.
scaffold313	subtractBed	intrn	489966	490084	.	+	.	Parent=CGI_10026607;
	scaffold313	TRF	Tandem_Repeat	489966	490084	220	+	.	.
scaffold313	subtractBed	intrn	489966	490084	.	-	.	Parent=CGI_10026608;
	scaffold313	TRF	Tandem_Repeat	489966	490084	220	+	.	.
scaffold313	subtractBed	intrn	527443	528117	.	+	.	Parent=CGI_10026610;
	scaffold313	TRF	Tandem_Repeat	527443	528117	1111	+	.	.
scaffold313	subtractBed	intrn	614440	614646	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614440	614646	67	-	.	.
scaffold313	subtractBed	intrn	614518	614643	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614518	614643	74	-	.	.
scaffold313	subtractBed	intrn	615204	615356	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	615204	615356	67	-	.	.
scaffold313	subtractBed	intrn	614834	614965	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614834	614965	91	-	.	.
scaffold313	subtractBed	intrn	614356	614649	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614356	614649	47	-	.	.
scaffold313	subtractBed	intrn	614837	615205	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614837	615205	64	-	.	.
scaffold313	subtractBed	intrn	614837	615004	.	-	.	Parent=CGI_10026614;
	scaffold313	WUBlastX	DNA_En-Spm	614837	615004	70	-	.	.
scaffold313	subtractBed	intrn	619507	619545	.	-	.	Parent=CGI_10026614;
	scaffold313	TRF	Tandem_Repeat	619507	619545	60	+	.	.
scaffold313	subtractBed	intrn	667345	667623	.	-	.	Parent=CGI_10026617;
	scaffold313	TRF	Tandem_Repeat	667345	667658	479	+	.	.
scaffold313	subtractBed	intrn	668284	668530	.	-	.	Parent=CGI_10026617;
	scaffold313	TRF	Tandem_Repeat	668284	668530	399	+	.	.
scaffold313	subtractBed	intrn	671201	671991	.	-	.	Parent=CGI_10026617;
	scaffold313	TRF	Tandem_Repeat	671201	672032	1527	+	.	.
scaffold313	subtractBed	intrn	679904	680548	.	-	.	Parent=CGI_10026618;
	scaffold313	TRF	Tandem_Repeat	679904	680548	888	+	.	.
scaffold313	subtractBed	intrn	680421	680509	.	-	.	Parent=CGI_10026618;
	scaffold313	TRF	Tandem_Repeat	680421	680509	52	+	.	.
scaffold313	subtractBed	intrn	679149	679682	.	-	.	Parent=CGI_10026618;
	scaffold313	WUBlastX	LINE_R2-Hero	679149	679682	164	+	.	.
scaffold313	subtractBed	intrn	678458	678523	.	-	.	Parent=CGI_10026618;
	scaffold313	WUBlastX	LINE_R2-Hero	678458	678523	24	+	.	.
scaffold313	subtractBed	intrn	684080	684499	.	-	.	Parent=CGI_10026618;
	scaffold313	TRF	Tandem_Repeat	684080	684499	691	+	.	.
scaffold313	subtractBed	intrn	684080	684499	.	-	.	Parent=CGI_10026618;
	scaffold313	TRF	Tandem_Repeat	684080	684499	687	+	.	.
scaffold313	subtractBed	intrn	695662	695901	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	695662	695901	300	+	.	.
scaffold313	subtractBed	intrn	696433	696565	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	696433	696565	239	+	.	.
scaffold313	subtractBed	intrn	709807	709851	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	709807	709851	90	+	.	.
scaffold313	subtractBed	intrn	712695	712948	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	712695	712948	499	+	.	.
scaffold313	subtractBed	intrn	716060	716194	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	716060	716194	99	+	.	.
scaffold313	subtractBed	intrn	722448	722485	.	+	.	Parent=CGI_10026620;
	scaffold313	TRF	Tandem_Repeat	722448	722485	67	+	.	.
scaffold313	subtractBed	intrn	741706	741802	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	741706	741802	176	+	.	.
scaffold313	subtractBed	intrn	750804	750851	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	750804	750851	96	+	.	.
scaffold313	subtractBed	intrn	758321	759307	.	+	.	Parent=CGI_10026622;
	scaffold313	WUBlastX	DNA_Crypton	758321	759307	88	+	.	.
scaffold313	subtractBed	intrn	758555	759139	.	+	.	Parent=CGI_10026622;
	scaffold313	WUBlastX	DNA_Crypton	758555	759139	123	+	.	.
scaffold313	subtractBed	intrn	762072	762417	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	762072	762417	461	+	.	.
scaffold313	subtractBed	intrn	762072	762570	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	762072	762570	615	+	.	.
scaffold313	subtractBed	intrn	762072	762570	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	762072	762570	572	+	.	.
scaffold313	subtractBed	intrn	762414	762570	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	762414	762570	221	+	.	.
scaffold313	subtractBed	intrn	769208	769455	.	+	.	Parent=CGI_10026622;
	scaffold313	TRF	Tandem_Repeat	769208	769455	406	+	.	.
scaffold313	subtractBed	intrn	835728	835860	.	-	.	Parent=CGI_10026627;
	scaffold313	TRF	Tandem_Repeat	835728	835860	136	+	.	.
scaffold313	subtractBed	intrn	944957	945015	.	+	.	Parent=CGI_10026628;
	scaffold313	TRF	Tandem_Repeat	944957	945015	118	+	.	.
scaffold313	subtractBed	intrn	947556	947617	.	+	.	Parent=CGI_10026628;
	scaffold313	TRF	Tandem_Repeat	947556	947617	124	+	.	.
scaffold313	subtractBed	intrn	960902	960943	.	+	.	Parent=CGI_10026629;
	scaffold313	TRF	Tandem_Repeat	960902	960943	84	+	.	.
scaffold313	subtractBed	intrn	964603	964652	.	+	.	Parent=CGI_10026629;
	scaffold313	TRF	Tandem_Repeat	964603	964652	100	+	.	.
scaffold313	subtractBed	intrn	965262	965293	.	+	.	Parent=CGI_10026629;
	scaffold313	TRF	Tandem_Repeat	965262	965293	64	+	.	.
scaffold313	subtractBed	intrn	965662	965742	.	+	.	Parent=CGI_10026629;
	scaffold313	TRF	Tandem_Repeat	965662	965742	162	+	.	.
scaffold313	subtractBed	intrn	986435	986475	.	+	.	Parent=CGI_10026631;
	scaffold313	TRF	Tandem_Repeat	986435	986475	73	+	.	.
scaffold313	subtractBed	intrn	1008225	1008271	.	-	.	Parent=CGI_10026632;
	scaffold313	TRF	Tandem_Repeat	1008225	1008271	51	+	.	.
scaffold313	subtractBed	intrn	1018041	1018093	.	-	.	Parent=CGI_10026633;
	scaffold313	TRF	Tandem_Repeat	1018041	1018093	106	+	.	.
scaffold313	subtractBed	intrn	1019225	1019416	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LINE_L1-Tx1	1019225	1019416	71	-	.	.
scaffold313	subtractBed	intrn	1018790	1019044	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LINE_L1-Tx1	1018790	1019044	41	-	.	.
scaffold313	subtractBed	intrn	1019050	1019100	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LINE_L1-Tx1	1019050	1019100	20	-	.	.
scaffold313	subtractBed	intrn	1018877	1019080	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LINE_L1-Tx1	1018877	1019080	52	-	.	.
scaffold313	subtractBed	intrn	1022887	1022961	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1022887	1023069	30	-	.	.
scaffold313	subtractBed	intrn	1025299	1025352	.	-	.	Parent=CGI_10026633;
	scaffold313	TRF	Tandem_Repeat	1025299	1025352	72	+	.	.
scaffold313	subtractBed	intrn	1024006	1024290	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1024006	1024290	99	-	.	.
scaffold313	subtractBed	intrn	1023659	1024000	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1023659	1024000	111	-	.	.
scaffold313	subtractBed	intrn	1024363	1024755	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1024363	1024755	127	-	.	.
scaffold313	subtractBed	intrn	1023469	1023642	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1023469	1023642	27	-	.	.
scaffold313	subtractBed	intrn	1022985	1023069	.	-	.	Parent=CGI_10026633;
	scaffold313	WUBlastX	LTR_Ngaro	1022887	1023069	30	-	.	.
scaffold313	subtractBed	intrn	1050358	1050398	.	-	.	Parent=CGI_10026634;
	scaffold313	TRF	Tandem_Repeat	1050358	1050398	82	+	.	.
scaffold313	subtractBed	intrn	1086122	1086166	.	+	.	Parent=CGI_10026637;
	scaffold313	TRF	Tandem_Repeat	1086122	1086166	90	+	.	.
scaffold313	subtractBed	intrn	1100324	1100348	.	+	.	Parent=CGI_10026638;
	scaffold313	TRF	Tandem_Repeat	1100324	1100348	50	+	.	.
scaffold313	subtractBed	intrn	1115559	1115608	.	+	.	Parent=CGI_10026639;
	scaffold313	TRF	Tandem_Repeat	1115559	1115608	100	+	.	.
scaffold313	subtractBed	intrn	1116307	1116350	.	+	.	Parent=CGI_10026639;
	scaffold313	TRF	Tandem_Repeat	1116307	1116350	88	+	.	.
scaffold313	subtractBed	intrn	1126193	1126199	.	+	.	Parent=CGI_10026639;
	scaffold313	TRF	Tandem_Repeat	1126120	1126199	115	+	.	.
scaffold313	subtractBed	intrn	1159080	1159121	.	+	.	Parent=CGI_10026641;
	scaffold313	TRF	Tandem_Repeat	1159080	1159121	75	+	.	.
scaffold313	subtractBed	intrn	1188840	1189091	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1188840	1189091	43	-	.	.
scaffold313	subtractBed	intrn	1189414	1190073	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1189414	1190073	36	-	.	.
scaffold313	subtractBed	intrn	1190183	1190257	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1190183	1190257	49	-	.	.
scaffold313	subtractBed	intrn	1189761	1189901	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1189761	1189901	66	-	.	.
scaffold313	subtractBed	intrn	1190150	1190269	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1190150	1190269	34	-	.	.
scaffold313	subtractBed	intrn	1189906	1190025	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1189906	1190025	41	-	.	.
scaffold313	subtractBed	intrn	1190177	1190278	.	+	.	Parent=CGI_10026643;
	scaffold313	WUBlastX	LINE_RTE-X	1190177	1190278	42	-	.	.
scaffold31388	subtractBed	intrn	5151	5375	.	-	.	Parent=CGI_10000740;
	scaffold31388	WUBlastX	DNA_Zator	5151	5375	29	-	.	.
scaffold31388	subtractBed	intrn	4844	5029	.	-	.	Parent=CGI_10000740;
	scaffold31388	WUBlastX	DNA_Zator	4844	5029	33	-	.	.
scaffold31388	subtractBed	intrn	5109	5339	.	-	.	Parent=CGI_10000740;
	scaffold31388	WUBlastX	DNA_Zator	5109	5339	82	-	.	.
scaffold31388	subtractBed	intrn	5648	6169	.	-	.	Parent=CGI_10000740;
	scaffold31388	WUBlastX	DNA_Zator	5648	6169	207	-	.	.
scaffold31388	subtractBed	intrn	6145	6174	.	-	.	Parent=CGI_10000740;
	scaffold31388	WUBlastX	DNA_Zator	6145	7962	645	-	.	.
scaffold314	subtractBed	intrn	59680	59745	.	+	.	Parent=CGI_10007542;
	scaffold314	TRF	Tandem_Repeat	59680	59745	132	+	.	.
scaffold314	subtractBed	intrn	65373	65410	.	+	.	Parent=CGI_10007542;
	scaffold314	TRF	Tandem_Repeat	65373	65410	76	+	.	.
scaffold314	subtractBed	intrn	85865	86627	.	-	.	Parent=CGI_10007543;
	scaffold314	TRF	Tandem_Repeat	85865	86634	1004	+	.	.
scaffold314	subtractBed	intrn	101231	102177	.	-	.	Parent=CGI_10007544;
	scaffold314	TRF	Tandem_Repeat	101231	102177	1316	+	.	.
scaffold314	subtractBed	intrn	102311	102340	.	-	.	Parent=CGI_10007544;
	scaffold314	TRF	Tandem_Repeat	102311	102340	51	+	.	.
scaffold314	subtractBed	intrn	178552	179052	.	+	.	Parent=CGI_10007548;
	scaffold314	TRF	Tandem_Repeat	178552	179052	306	+	.	.
scaffold315	subtractBed	intrn	30717	31721	.	+	.	Parent=CGI_10020398;
	scaffold315	WUBlastX	DNA_IS4EU	30717	31721	601	+	.	.
scaffold315	subtractBed	intrn	30603	31724	.	+	.	Parent=CGI_10020398;
	scaffold315	WUBlastX	DNA_Kolobok-IS4	30336	31724	346	+	.	.
scaffold315	subtractBed	intrn	38949	39098	.	+	.	Parent=CGI_10020399;
	scaffold315	TRF	Tandem_Repeat	38949	39098	86	+	.	.
scaffold315	subtractBed	intrn	39367	39582	.	+	.	Parent=CGI_10020399;
	scaffold315	WUBlastX	DNA_Kolobok	39367	39582	92	+	.	.
scaffold315	subtractBed	intrn	41562	41783	.	+	.	Parent=CGI_10020399;
	scaffold315	WUBlastX	DNA_Kolobok	41562	41783	61	-	.	.
scaffold315	subtractBed	intrn	41568	41855	.	+	.	Parent=CGI_10020399;
	scaffold315	WUBlastX	DNA_Kolobok	41568	41855	30	-	.	.
scaffold315	subtractBed	intrn	47411	47445	.	-	.	Parent=CGI_10020400;
	scaffold315	TRF	Tandem_Repeat	47411	47445	52	+	.	.
scaffold315	subtractBed	intrn	66163	66603	.	-	.	Parent=CGI_10020403;
	scaffold315	TRF	Tandem_Repeat	66136	66603	690	+	.	.
scaffold315	subtractBed	intrn	71431	71469	.	-	.	Parent=CGI_10020403;
	scaffold315	TRF	Tandem_Repeat	71431	71469	78	+	.	.
scaffold315	subtractBed	intrn	75725	75786	.	-	.	Parent=CGI_10020403;
	scaffold315	TRF	Tandem_Repeat	75725	75786	108	+	.	.
scaffold315	subtractBed	intrn	75840	75931	.	-	.	Parent=CGI_10020403;
	scaffold315	TRF	Tandem_Repeat	75840	75931	125	+	.	.
scaffold315	subtractBed	intrn	100927	100990	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	100927	100990	128	+	.	.
scaffold315	subtractBed	intrn	107716	107758	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	107716	107758	68	+	.	.
scaffold315	subtractBed	intrn	123785	123879	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	123785	123879	181	+	.	.
scaffold315	subtractBed	intrn	124193	124612	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124193	124612	188	+	.	.
scaffold315	subtractBed	intrn	124115	125142	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124115	125142	941	+	.	.
scaffold315	subtractBed	intrn	124301	125783	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124301	125783	1559	+	.	.
scaffold315	subtractBed	intrn	124614	125783	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124614	125783	552	+	.	.
scaffold315	subtractBed	intrn	124053	125736	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124053	125736	1202	+	.	.
scaffold315	subtractBed	intrn	124301	125827	.	+	.	Parent=CGI_10020405;
	scaffold315	TRF	Tandem_Repeat	124301	125827	1667	+	.	.
scaffold315	subtractBed	intrn	167714	167946	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	167714	167946	226	+	.	.
scaffold315	subtractBed	intrn	176242	177041	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	176242	177041	681	+	.	.
scaffold315	subtractBed	intrn	178391	178436	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	178391	178436	67	+	.	.
scaffold315	subtractBed	intrn	178582	178637	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	178582	178637	103	+	.	.
scaffold315	subtractBed	intrn	178914	178951	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	178914	178951	51	+	.	.
scaffold315	subtractBed	intrn	183563	185075	.	+	.	Parent=CGI_10020409;
	scaffold315	TRF	Tandem_Repeat	183563	185075	1765	+	.	.
scaffold315	subtractBed	intrn	204209	204892	.	+	.	Parent=CGI_10020410;
	scaffold315	WUBlastX	LTR_Pao	204209	204892	47	-	.	.
scaffold315	subtractBed	intrn	204542	204925	.	+	.	Parent=CGI_10020410;
	scaffold315	WUBlastX	LTR_Pao	204542	204925	101	-	.	.
scaffold315	subtractBed	intrn	204386	204916	.	+	.	Parent=CGI_10020410;
	scaffold315	WUBlastX	LTR_Pao	204386	204916	64	-	.	.
scaffold315	subtractBed	intrn	269550	269576	.	+	.	Parent=CGI_10020413;
	scaffold315	TRF	Tandem_Repeat	269550	269576	54	+	.	.
scaffold315	subtractBed	intrn	274967	275017	.	+	.	Parent=CGI_10020413;
	scaffold315	TRF	Tandem_Repeat	274967	275017	66	+	.	.
scaffold315	subtractBed	intrn	301340	301383	.	+	.	Parent=CGI_10020417;
	scaffold315	TRF	Tandem_Repeat	301340	301383	88	+	.	.
scaffold315	subtractBed	intrn	304850	304948	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	304850	304948	43	+	.	.
scaffold315	subtractBed	intrn	305069	305290	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	305069	305290	24	+	.	.
scaffold315	subtractBed	intrn	304262	304939	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-BovB	304262	304939	38	+	.	.
scaffold315	subtractBed	intrn	304265	304489	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_L2	304265	304489	77	+	.	.
scaffold315	subtractBed	intrn	304970	305173	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	304970	305173	24	+	.	.
scaffold315	subtractBed	intrn	305057	305173	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	305057	305173	30	+	.	.
scaffold315	subtractBed	intrn	319637	319661	.	+	.	Parent=CGI_10020417;
	scaffold315	TRF	Tandem_Repeat	319637	319661	50	+	.	.
scaffold315	subtractBed	intrn	318868	318981	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	318868	318981	42	+	.	.
scaffold315	subtractBed	intrn	319046	319144	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	319046	319144	26	+	.	.
scaffold315	subtractBed	intrn	317905	318000	.	+	.	Parent=CGI_10020417;
	scaffold315	WUBlastX	LINE_RTE-X	317905	318000	21	+	.	.
scaffold315	subtractBed	intrn	327128	327197	.	+	.	Parent=CGI_10020417;
	scaffold315	TRF	Tandem_Repeat	327128	327197	140	+	.	.
scaffold315	subtractBed	intrn	339300	339655	.	+	.	Parent=CGI_10020419;
	scaffold315	TRF	Tandem_Repeat	339300	339655	520	+	.	.
scaffold315	subtractBed	intrn	346508	347042	.	+	.	Parent=CGI_10020419;
	scaffold315	TRF	Tandem_Repeat	346508	347042	597	+	.	.
scaffold315	subtractBed	intrn	351580	351616	.	+	.	Parent=CGI_10020419;
	scaffold315	TRF	Tandem_Repeat	351580	351616	74	+	.	.
scaffold315	subtractBed	intrn	346508	347042	.	-	.	Parent=CGI_10020420;
	scaffold315	TRF	Tandem_Repeat	346508	347042	597	+	.	.
scaffold315	subtractBed	intrn	351580	351616	.	-	.	Parent=CGI_10020420;
	scaffold315	TRF	Tandem_Repeat	351580	351616	74	+	.	.
scaffold315	subtractBed	intrn	391668	391770	.	-	.	Parent=CGI_10020424;
	scaffold315	WUBlastX	DNA_hAT	391510	391770	67	-	.	.
scaffold315	subtractBed	intrn	392013	392014	.	-	.	Parent=CGI_10020424;
	scaffold315	WUBlastX	DNA_hAT	392013	392138	38	-	.	.
scaffold315	subtractBed	intrn	392636	392637	.	-	.	Parent=CGI_10020424;
	scaffold315	WUBlastX	DNA_hAT	392636	392815	58	-	.	.
scaffold315	subtractBed	intrn	392815	392815	.	-	.	Parent=CGI_10020424;
	scaffold315	WUBlastX	DNA_hAT	392636	392815	58	-	.	.
scaffold315	subtractBed	intrn	393263	393264	.	-	.	Parent=CGI_10020424;
	scaffold315	WUBlastX	DNA_hAT	393263	393394	26	-	.	.
scaffold315	subtractBed	intrn	411584	411753	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	411584	411753	340	+	.	.
scaffold315	subtractBed	intrn	413119	413584	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	413119	413584	844	+	.	.
scaffold315	subtractBed	intrn	420773	421734	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	420773	421734	1538	+	.	.
scaffold315	subtractBed	intrn	421758	421807	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	421758	421807	55	+	.	.
scaffold315	subtractBed	intrn	421761	421816	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	421761	421816	67	+	.	.
scaffold315	subtractBed	intrn	421758	421816	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	421758	421816	82	+	.	.
scaffold315	subtractBed	intrn	421765	421816	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	421765	421816	59	+	.	.
scaffold315	subtractBed	intrn	422295	422461	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	422295	422461	325	+	.	.
scaffold315	subtractBed	intrn	425094	425166	.	-	.	Parent=CGI_10020425;
	scaffold315	TRF	Tandem_Repeat	425094	425166	69	+	.	.
scaffold315	subtractBed	intrn	427266	427657	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	426962	427657	567	+	.	.
scaffold315	subtractBed	intrn	427821	428171	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	427821	428171	262	+	.	.
scaffold315	subtractBed	intrn	428180	428236	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	428180	428236	24	+	.	.
scaffold315	subtractBed	intrn	427660	427821	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	427660	427821	121	+	.	.
scaffold315	subtractBed	intrn	428897	429316	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	428897	429316	66	-	.	.
scaffold315	subtractBed	intrn	429650	430009	.	+	.	Parent=CGI_10020426;
	scaffold315	WUBlastX	DNA_Harbinger	429650	430009	40	-	.	.
scaffold315	subtractBed	intrn	444438	444490	.	+	.	Parent=CGI_10020426;
	scaffold315	TRF	Tandem_Repeat	444438	444490	106	+	.	.
scaffold315	subtractBed	intrn	444925	445227	.	+	.	Parent=CGI_10020426;
	scaffold315	TRF	Tandem_Repeat	444925	445227	457	+	.	.
scaffold315	subtractBed	intrn	444925	445324	.	+	.	Parent=CGI_10020426;
	scaffold315	TRF	Tandem_Repeat	444925	445324	510	+	.	.
scaffold315	subtractBed	intrn	444438	444490	.	-	.	Parent=CGI_10020427;
	scaffold315	TRF	Tandem_Repeat	444438	444490	106	+	.	.
scaffold315	subtractBed	intrn	444925	445227	.	-	.	Parent=CGI_10020427;
	scaffold315	TRF	Tandem_Repeat	444925	445227	457	+	.	.
scaffold315	subtractBed	intrn	444925	445324	.	-	.	Parent=CGI_10020427;
	scaffold315	TRF	Tandem_Repeat	444925	445324	510	+	.	.
scaffold315	subtractBed	intrn	490693	490728	.	-	.	Parent=CGI_10020431;
	scaffold315	TRF	Tandem_Repeat	490693	490728	72	+	.	.
scaffold315	subtractBed	intrn	504187	504326	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	504187	504326	154	+	.	.
scaffold315	subtractBed	intrn	505095	505387	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	505095	505387	289	+	.	.
scaffold315	subtractBed	intrn	505097	505399	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	505097	505399	282	+	.	.
scaffold315	subtractBed	intrn	506064	506323	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	506064	506323	279	+	.	.
scaffold315	subtractBed	intrn	506064	506323	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	506064	506323	333	+	.	.
scaffold315	subtractBed	intrn	506095	506325	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	506095	506325	315	+	.	.
scaffold315	subtractBed	intrn	512599	512640	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	512599	512640	84	+	.	.
scaffold315	subtractBed	intrn	512842	513004	.	+	.	Parent=CGI_10020433;
	scaffold315	TRF	Tandem_Repeat	512842	513004	242	+	.	.
scaffold315	subtractBed	intrn	508604	509698	.	+	.	Parent=CGI_10020433;
	scaffold315	WUBlastX	LINE_RTE-X	508604	509698	46	-	.	.
scaffold315	subtractBed	intrn	508607	509386	.	+	.	Parent=CGI_10020433;
	scaffold315	WUBlastX	LINE_RTE-X	508607	509386	96	-	.	.
scaffold315	subtractBed	intrn	521258	521295	.	+	.	Parent=CGI_10020435;
	scaffold315	TRF	Tandem_Repeat	521258	521295	76	+	.	.
scaffold315	subtractBed	intrn	528811	528948	.	+	.	Parent=CGI_10020436;
	scaffold315	TRF	Tandem_Repeat	528811	528948	80	+	.	.
scaffold315	subtractBed	intrn	608820	609003	.	-	.	Parent=CGI_10020442;
	scaffold315	TRF	Tandem_Repeat	608820	609018	254	+	.	.
scaffold315	subtractBed	intrn	606127	606544	.	-	.	Parent=CGI_10020442;
	scaffold315	TRF	Tandem_Repeat	606127	606544	455	+	.	.
scaffold315	subtractBed	intrn	606141	606530	.	-	.	Parent=CGI_10020442;
	scaffold315	TRF	Tandem_Repeat	606141	606530	393	+	.	.
scaffold315	subtractBed	intrn	606127	606544	.	-	.	Parent=CGI_10020442;
	scaffold315	TRF	Tandem_Repeat	606127	606544	489	+	.	.
scaffold315	subtractBed	intrn	640212	640249	.	+	.	Parent=CGI_10020446;
	scaffold315	TRF	Tandem_Repeat	640212	640249	76	+	.	.
scaffold315	subtractBed	intrn	642941	642979	.	+	.	Parent=CGI_10020446;
	scaffold315	TRF	Tandem_Repeat	642941	642979	69	+	.	.
scaffold31538	subtractBed	intrn	3185	3228	.	-	.	Parent=CGI_10000764;
	scaffold31538	TRF	Tandem_Repeat	3185	3228	88	+	.	.
scaffold316	subtractBed	intrn	4022	4240	.	-	.	Parent=CGI_10001602;
	scaffold316	TRF	Tandem_Repeat	4022	4240	438	+	.	.
scaffold316	subtractBed	intrn	4238	4285	.	-	.	Parent=CGI_10001602;
	scaffold316	TRF	Tandem_Repeat	4238	4285	96	+	.	.
scaffold316	subtractBed	intrn	4396	4969	.	-	.	Parent=CGI_10001602;
	scaffold316	TRF	Tandem_Repeat	4396	4969	1148	+	.	.
scaffold316	subtractBed	intrn	16635	16787	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16635	16787	67	+	.	.
scaffold316	subtractBed	intrn	16781	17017	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16781	17017	76	+	.	.
scaffold316	subtractBed	intrn	16554	16790	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16554	16790	49	+	.	.
scaffold316	subtractBed	intrn	16781	17083	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16781	17083	60	+	.	.
scaffold316	subtractBed	intrn	16599	16802	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16599	16802	66	+	.	.
scaffold316	subtractBed	intrn	16790	17140	.	-	.	Parent=CGI_10001602;
	scaffold316	WUBlastX	LTR_Gypsy	16790	17140	40	+	.	.
scaffold316	subtractBed	intrn	24402	24471	.	-	.	Parent=CGI_10001602;
	scaffold316	TRF	Tandem_Repeat	24402	24471	140	+	.	.
scaffold316	subtractBed	intrn	24523	24547	.	-	.	Parent=CGI_10001602;
	scaffold316	TRF	Tandem_Repeat	24523	24547	50	+	.	.
scaffold317	subtractBed	intrn	7479	7525	.	+	.	Parent=CGI_10019337;
	scaffold317	TRF	Tandem_Repeat	7479	7525	94	+	.	.
scaffold317	subtractBed	intrn	7841	7844	.	+	.	Parent=CGI_10019337;
	scaffold317	WUBlastX	DNA_Kolobok-Hyd	7841	8005	20	+	.	.
scaffold317	subtractBed	intrn	8374	8431	.	+	.	Parent=CGI_10019337;
	scaffold317	TRF	Tandem_Repeat	8374	8431	109	+	.	.
scaffold317	subtractBed	intrn	9236	9245	.	+	.	Parent=CGI_10019337;
	scaffold317	WUBlastX	DNA_Kolobok-Hyd	9236	9577	43	+	.	.
scaffold317	subtractBed	intrn	11080	11109	.	+	.	Parent=CGI_10019337;
	scaffold317	TRF	Tandem_Repeat	11080	11109	51	+	.	.
scaffold317	subtractBed	intrn	9516	9586	.	+	.	Parent=CGI_10019337;
	scaffold317	WUBlastX	DNA_IS4EU	9332	9586	50	+	.	.
scaffold317	subtractBed	intrn	9516	9577	.	+	.	Parent=CGI_10019337;
	scaffold317	WUBlastX	DNA_Kolobok-Hyd	9236	9577	43	+	.	.
scaffold317	subtractBed	intrn	17323	17392	.	+	.	Parent=CGI_10019337;
	scaffold317	TRF	Tandem_Repeat	17323	17392	52	+	.	.
scaffold317	subtractBed	intrn	63883	63958	.	-	.	Parent=CGI_10019339;
	scaffold317	TRF	Tandem_Repeat	63883	63958	152	+	.	.
scaffold317	subtractBed	intrn	99803	99840	.	-	.	Parent=CGI_10019340;
	scaffold317	TRF	Tandem_Repeat	99803	99840	76	+	.	.
scaffold317	subtractBed	intrn	112022	112058	.	-	.	Parent=CGI_10019343;
	scaffold317	TRF	Tandem_Repeat	112022	112058	74	+	.	.
scaffold317	subtractBed	intrn	112252	112313	.	-	.	Parent=CGI_10019343;
	scaffold317	TRF	Tandem_Repeat	112252	112313	124	+	.	.
scaffold317	subtractBed	intrn	111630	111686	.	-	.	Parent=CGI_10019343;
	scaffold317	WUBlastX	DNA_Harbinger	111630	111686	25	+	.	.
scaffold317	subtractBed	intrn	111682	111912	.	-	.	Parent=CGI_10019343;
	scaffold317	WUBlastX	DNA_Harbinger	111682	111912	110	+	.	.
scaffold317	subtractBed	intrn	115719	115847	.	+	.	Parent=CGI_10019344;
	scaffold317	WUBlastX	LTR_Gypsy	115719	115847	24	+	.	.
scaffold317	subtractBed	intrn	125173	125901	.	+	.	Parent=CGI_10019345;
	scaffold317	TRF	Tandem_Repeat	125173	125901	1086	+	.	.
scaffold317	subtractBed	intrn	125983	126030	.	+	.	Parent=CGI_10019345;
	scaffold317	TRF	Tandem_Repeat	125983	126030	60	+	.	.
scaffold317	subtractBed	intrn	136804	138024	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_hAT-hATw	136804	138024	362	+	.	.
scaffold317	subtractBed	intrn	135238	135354	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_hAT-hATw	135238	135354	36	+	.	.
scaffold317	subtractBed	intrn	135603	136250	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_hAT-hATw	135603	136250	39	+	.	.
scaffold317	subtractBed	intrn	136250	136708	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_hAT-hATw	136250	136708	121	+	.	.
scaffold317	subtractBed	intrn	143756	143983	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_Sola	143756	143983	121	+	.	.
scaffold317	subtractBed	intrn	143977	144135	.	+	.	Parent=CGI_10019345;
	scaffold317	WUBlastX	DNA_Sola	143977	144135	46	+	.	.
scaffold317	subtractBed	intrn	149055	149144	.	+	.	Parent=CGI_10019346;
	scaffold317	WUBlastX	LINE_L2	149055	149144	38	-	.	.
scaffold317	subtractBed	intrn	157066	157096	.	+	.	Parent=CGI_10019347;
	scaffold317	TRF	Tandem_Repeat	157066	157096	62	+	.	.
scaffold317	subtractBed	intrn	158673	159157	.	+	.	Parent=CGI_10019347;
	scaffold317	WUBlastX	DNA_Maverick	158673	159209	239	+	.	.
scaffold317	subtractBed	intrn	203977	204017	.	-	.	Parent=CGI_10019348;
	scaffold317	TRF	Tandem_Repeat	203977	204017	82	+	.	.
scaffold317	subtractBed	intrn	237555	237606	.	+	.	Parent=CGI_10019352;
	scaffold317	TRF	Tandem_Repeat	237555	237606	95	+	.	.
scaffold317	subtractBed	intrn	241010	241096	.	+	.	Parent=CGI_10019352;
	scaffold317	TRF	Tandem_Repeat	241010	241096	86	+	.	.
scaffold317	subtractBed	intrn	241023	241105	.	+	.	Parent=CGI_10019352;
	scaffold317	TRF	Tandem_Repeat	241023	241105	51	+	.	.
scaffold317	subtractBed	intrn	241121	241192	.	+	.	Parent=CGI_10019352;
	scaffold317	TRF	Tandem_Repeat	241121	241192	74	+	.	.
scaffold317	subtractBed	intrn	242515	243235	.	+	.	Parent=CGI_10019352;
	scaffold317	TRF	Tandem_Repeat	242515	243235	973	+	.	.
scaffold317	subtractBed	intrn	452322	452401	.	-	.	Parent=CGI_10019358;
	scaffold317	TRF	Tandem_Repeat	452322	452401	114	+	.	.
scaffold317	subtractBed	intrn	459702	459741	.	-	.	Parent=CGI_10019358;
	scaffold317	TRF	Tandem_Repeat	459702	459741	53	+	.	.
scaffold317	subtractBed	intrn	500353	500646	.	-	.	Parent=CGI_10019359;
	scaffold317	WUBlastX	DNA_MuDR	499978	500646	98	-	.	.
scaffold317	subtractBed	intrn	500353	500601	.	-	.	Parent=CGI_10019359;
	scaffold317	WUBlastX	DNA_MuDR	500035	500601	116	-	.	.
scaffold317	subtractBed	intrn	509021	509054	.	-	.	Parent=CGI_10019359;
	scaffold317	TRF	Tandem_Repeat	509021	509054	68	+	.	.
scaffold317	subtractBed	intrn	516983	517038	.	-	.	Parent=CGI_10019359;
	scaffold317	TRF	Tandem_Repeat	516983	517038	105	+	.	.
scaffold317	subtractBed	intrn	542786	542840	.	+	.	Parent=CGI_10019360;
	scaffold317	TRF	Tandem_Repeat	542786	542840	110	+	.	.
scaffold317	subtractBed	intrn	579487	579525	.	+	.	Parent=CGI_10019363;
	scaffold317	TRF	Tandem_Repeat	579487	579525	69	+	.	.
scaffold32	subtractBed	intrn	69265	69314	.	+	.	Parent=CGI_10010062;
	scaffold32	TRF	Tandem_Repeat	69265	69314	66	+	.	.
scaffold32	subtractBed	intrn	69487	70730	.	+	.	Parent=CGI_10010062;
	scaffold32	TRF	Tandem_Repeat	69487	70730	1981	+	.	.
scaffold32	subtractBed	intrn	77437	77471	.	+	.	Parent=CGI_10010063;
	scaffold32	TRF	Tandem_Repeat	77437	77471	61	+	.	.
scaffold32	subtractBed	intrn	79295	79334	.	+	.	Parent=CGI_10010063;
	scaffold32	TRF	Tandem_Repeat	79295	79334	80	+	.	.
scaffold32	subtractBed	intrn	119750	120070	.	+	.	Parent=CGI_10010065;
	scaffold32	TRF	Tandem_Repeat	119750	120070	133	+	.	.
scaffold32	subtractBed	intrn	120369	120504	.	+	.	Parent=CGI_10010065;
	scaffold32	TRF	Tandem_Repeat	120369	120504	84	+	.	.
scaffold32	subtractBed	intrn	124309	124607	.	-	.	Parent=CGI_10010066;
	scaffold32	TRF	Tandem_Repeat	124309	124607	251	+	.	.
scaffold32	subtractBed	intrn	124304	124601	.	-	.	Parent=CGI_10010066;
	scaffold32	TRF	Tandem_Repeat	124304	124601	291	+	.	.
scaffold32	subtractBed	intrn	142622	142846	.	+	.	Parent=CGI_10010068;
	scaffold32	WUBlastX	DNA_TcMar-Marin	142622	142846	58	-	.	.
scaffold32	subtractBed	intrn	152350	152397	.	+	.	Parent=CGI_10010068;
	scaffold32	TRF	Tandem_Repeat	152350	152397	96	+	.	.
scaffold32	subtractBed	intrn	162029	162063	.	-	.	Parent=CGI_10010069;
	scaffold32	TRF	Tandem_Repeat	162029	162063	52	+	.	.
scaffold32	subtractBed	intrn	189140	189197	.	-	.	Parent=CGI_10010072;
	scaffold32	TRF	Tandem_Repeat	189140	189197	109	+	.	.
scaffold32	subtractBed	intrn	192105	192146	.	-	.	Parent=CGI_10010072;
	scaffold32	TRF	Tandem_Repeat	192105	192146	84	+	.	.
scaffold32	subtractBed	intrn	194174	194233	.	-	.	Parent=CGI_10010072;
	scaffold32	TRF	Tandem_Repeat	194174	194233	111	+	.	.
scaffold321	subtractBed	intrn	8512	8548	.	+	.	Parent=CGI_10020795;
	scaffold321	TRF	Tandem_Repeat	8512	8548	56	+	.	.
scaffold321	subtractBed	intrn	32501	32544	.	-	.	Parent=CGI_10020797;
	scaffold321	TRF	Tandem_Repeat	32501	32544	61	+	.	.
scaffold321	subtractBed	intrn	123897	123952	.	-	.	Parent=CGI_10020799;
	scaffold321	TRF	Tandem_Repeat	123897	123952	87	+	.	.
scaffold321	subtractBed	intrn	134946	135119	.	-	.	Parent=CGI_10020799;
	scaffold321	TRF	Tandem_Repeat	134946	135119	136	+	.	.
scaffold321	subtractBed	intrn	135342	135471	.	-	.	Parent=CGI_10020799;
	scaffold321	TRF	Tandem_Repeat	135342	135471	97	+	.	.
scaffold321	subtractBed	intrn	136387	136445	.	-	.	Parent=CGI_10020799;
	scaffold321	TRF	Tandem_Repeat	136387	136445	109	+	.	.
scaffold321	subtractBed	intrn	264969	266061	.	+	.	Parent=CGI_10020804;
	scaffold321	TRF	Tandem_Repeat	264969	266061	1600	+	.	.
scaffold321	subtractBed	intrn	266266	266303	.	+	.	Parent=CGI_10020804;
	scaffold321	TRF	Tandem_Repeat	266266	266303	67	+	.	.
scaffold321	subtractBed	intrn	266633	266693	.	+	.	Parent=CGI_10020804;
	scaffold321	TRF	Tandem_Repeat	266633	266693	95	+	.	.
scaffold321	subtractBed	intrn	266630	266693	.	+	.	Parent=CGI_10020804;
	scaffold321	TRF	Tandem_Repeat	266630	266693	101	+	.	.
scaffold321	subtractBed	intrn	281690	281719	.	+	.	Parent=CGI_10020805;
	scaffold321	TRF	Tandem_Repeat	281690	281719	60	+	.	.
scaffold321	subtractBed	intrn	287746	287896	.	+	.	Parent=CGI_10020805;
	scaffold321	TRF	Tandem_Repeat	287746	287896	189	+	.	.
scaffold321	subtractBed	intrn	287761	288564	.	+	.	Parent=CGI_10020805;
	scaffold321	TRF	Tandem_Repeat	287761	288564	932	+	.	.
scaffold321	subtractBed	intrn	287902	288564	.	+	.	Parent=CGI_10020805;
	scaffold321	TRF	Tandem_Repeat	287902	288564	862	+	.	.
scaffold321	subtractBed	intrn	289346	290151	.	+	.	Parent=CGI_10020805;
	scaffold321	TRF	Tandem_Repeat	289346	290151	659	+	.	.
scaffold321	subtractBed	intrn	305405	305501	.	-	.	Parent=CGI_10020806;
	scaffold321	TRF	Tandem_Repeat	305405	305501	79	+	.	.
scaffold321	subtractBed	intrn	313397	313493	.	-	.	Parent=CGI_10020806;
	scaffold321	TRF	Tandem_Repeat	313397	313493	79	+	.	.
scaffold321	subtractBed	intrn	314825	315030	.	-	.	Parent=CGI_10020806;
	scaffold321	TRF	Tandem_Repeat	314825	315030	112	+	.	.
scaffold321	subtractBed	intrn	322269	322300	.	-	.	Parent=CGI_10020806;
	scaffold321	TRF	Tandem_Repeat	322269	322300	64	+	.	.
scaffold321	subtractBed	intrn	326235	326276	.	-	.	Parent=CGI_10020806;
	scaffold321	TRF	Tandem_Repeat	326235	326276	84	+	.	.
scaffold321	subtractBed	intrn	480450	480503	.	-	.	Parent=CGI_10020812;
	scaffold321	TRF	Tandem_Repeat	480450	480503	65	+	.	.
scaffold321	subtractBed	intrn	480450	480506	.	-	.	Parent=CGI_10020812;
	scaffold321	TRF	Tandem_Repeat	480450	480506	80	+	.	.
scaffold321	subtractBed	intrn	479566	480216	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	479566	480216	176	+	.	.
scaffold321	subtractBed	intrn	476954	477064	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	476954	477064	25	-	.	.
scaffold321	subtractBed	intrn	477640	477825	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	477640	477825	64	-	.	.
scaffold321	subtractBed	intrn	478080	478763	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	478080	478763	172	+	.	.
scaffold321	subtractBed	intrn	477411	477629	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	477411	477629	98	-	.	.
scaffold321	subtractBed	intrn	477360	477623	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	477360	477623	44	-	.	.
scaffold321	subtractBed	intrn	477637	477765	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	477637	477765	79	-	.	.
scaffold321	subtractBed	intrn	478257	478757	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	478257	478757	191	+	.	.
scaffold321	subtractBed	intrn	479049	479135	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	479049	479135	36	+	.	.
scaffold321	subtractBed	intrn	476993	477397	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LINE_RTE-X	476993	477397	42	-	.	.
scaffold321	subtractBed	intrn	478260	479111	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	478260	479111	175	+	.	.
scaffold321	subtractBed	intrn	479129	479572	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	479129	479572	463	+	.	.
scaffold321	subtractBed	intrn	477812	478081	.	-	.	Parent=CGI_10020812;
	scaffold321	WUBlastX	LTR_Gypsy	477812	478081	190	+	.	.
scaffold322	subtractBed	intrn	3407	4391	.	-	.	Parent=CGI_10009747;
	scaffold322	TRF	Tandem_Repeat	3407	4391	651	+	.	.
scaffold322	subtractBed	intrn	3460	4391	.	-	.	Parent=CGI_10009747;
	scaffold322	TRF	Tandem_Repeat	3460	4391	1127	+	.	.
scaffold322	subtractBed	intrn	3460	4391	.	-	.	Parent=CGI_10009747;
	scaffold322	TRF	Tandem_Repeat	3460	4391	1093	+	.	.
scaffold322	subtractBed	intrn	6954	6994	.	-	.	Parent=CGI_10009747;
	scaffold322	TRF	Tandem_Repeat	6954	6994	82	+	.	.
scaffold322	subtractBed	intrn	23550	23594	.	+	.	Parent=CGI_10009748;
	scaffold322	TRF	Tandem_Repeat	23550	23594	90	+	.	.
scaffold322	subtractBed	intrn	30974	31046	.	+	.	Parent=CGI_10009748;
	scaffold322	TRF	Tandem_Repeat	30974	31046	51	+	.	.
scaffold322	subtractBed	intrn	30973	31046	.	+	.	Parent=CGI_10009748;
	scaffold322	TRF	Tandem_Repeat	30973	31046	75	+	.	.
scaffold322	subtractBed	intrn	195611	195674	.	-	.	Parent=CGI_10009751;
	scaffold322	TRF	Tandem_Repeat	195611	195674	110	+	.	.
scaffold323	subtractBed	intrn	30505	30532	.	+	.	Parent=CGI_10009772;
	scaffold323	TRF	Tandem_Repeat	30505	30532	56	+	.	.
scaffold323	subtractBed	intrn	31493	31557	.	+	.	Parent=CGI_10009772;
	scaffold323	TRF	Tandem_Repeat	31493	31557	85	+	.	.
scaffold323	subtractBed	intrn	35639	35686	.	+	.	Parent=CGI_10009772;
	scaffold323	TRF	Tandem_Repeat	35639	35686	96	+	.	.
scaffold323	subtractBed	intrn	51780	52943	.	+	.	Parent=CGI_10009773;
	scaffold323	WUBlastX	RC_Helitron	51780	52943	725	+	.	.
scaffold323	subtractBed	intrn	52946	53500	.	+	.	Parent=CGI_10009773;
	scaffold323	WUBlastX	RC_Helitron	52946	53500	167	+	.	.
scaffold323	subtractBed	intrn	52946	53617	.	+	.	Parent=CGI_10009773;
	scaffold323	WUBlastX	RC_Helitron	52946	53617	34	+	.	.
scaffold323	subtractBed	intrn	57951	57985	.	+	.	Parent=CGI_10009773;
	scaffold323	TRF	Tandem_Repeat	57951	57985	61	+	.	.
scaffold323	subtractBed	intrn	57983	58024	.	+	.	Parent=CGI_10009773;
	scaffold323	TRF	Tandem_Repeat	57983	58024	84	+	.	.
scaffold323	subtractBed	intrn	194248	194459	.	+	.	Parent=CGI_10009781;
	scaffold323	TRF	Tandem_Repeat	194248	194459	286	+	.	.
scaffold323	subtractBed	intrn	195298	195543	.	+	.	Parent=CGI_10009781;
	scaffold323	TRF	Tandem_Repeat	195298	195543	286	+	.	.
scaffold323	subtractBed	intrn	195294	195543	.	+	.	Parent=CGI_10009781;
	scaffold323	TRF	Tandem_Repeat	195294	195543	335	+	.	.
scaffold32300	subtractBed	intrn	10298	10304	.	-	.	Parent=CGI_10000880;
	scaffold32300	WUBlastX	DNA_hAT-Ac	10298	10576	78	-	.	.
scaffold324	subtractBed	intrn	118	158	.	+	.	Parent=CGI_10016182;
	scaffold324	TRF	Tandem_Repeat	118	158	55	+	.	.
scaffold324	subtractBed	intrn	18773	18829	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	18773	18829	105	+	.	.
scaffold324	subtractBed	intrn	18897	18967	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	18897	18967	53	+	.	.
scaffold324	subtractBed	intrn	18880	18946	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	18880	18946	59	+	.	.
scaffold324	subtractBed	intrn	36344	36436	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	36344	36436	100	+	.	.
scaffold324	subtractBed	intrn	39940	39966	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	39940	39966	54	+	.	.
scaffold324	subtractBed	intrn	41848	41889	.	+	.	Parent=CGI_10016183;
	scaffold324	TRF	Tandem_Repeat	41848	41889	50	+	.	.
scaffold324	subtractBed	intrn	89650	89688	.	+	.	Parent=CGI_10016186;
	scaffold324	TRF	Tandem_Repeat	89650	89688	78	+	.	.
scaffold324	subtractBed	intrn	89687	89721	.	+	.	Parent=CGI_10016186;
	scaffold324	TRF	Tandem_Repeat	89687	89721	70	+	.	.
scaffold324	subtractBed	intrn	102718	102759	.	+	.	Parent=CGI_10016187;
	scaffold324	TRF	Tandem_Repeat	102718	102759	84	+	.	.
scaffold324	subtractBed	intrn	150146	150290	.	+	.	Parent=CGI_10016190;
	scaffold324	TRF	Tandem_Repeat	150146	150290	209	+	.	.
scaffold324	subtractBed	intrn	179534	179572	.	-	.	Parent=CGI_10016191;
	scaffold324	TRF	Tandem_Repeat	179534	179572	78	+	.	.
scaffold324	subtractBed	intrn	183765	183821	.	+	.	Parent=CGI_10016192;
	scaffold324	TRF	Tandem_Repeat	183765	183821	68	+	.	.
scaffold324	subtractBed	intrn	218434	218499	.	+	.	Parent=CGI_10016195;
	scaffold324	TRF	Tandem_Repeat	218434	218499	116	+	.	.
scaffold324	subtractBed	intrn	218435	218496	.	+	.	Parent=CGI_10016195;
	scaffold324	TRF	Tandem_Repeat	218435	218496	72	+	.	.
scaffold324	subtractBed	intrn	224701	224787	.	+	.	Parent=CGI_10016196;
	scaffold324	TRF	Tandem_Repeat	224701	224787	104	+	.	.
scaffold324	subtractBed	intrn	224873	225002	.	+	.	Parent=CGI_10016196;
	scaffold324	TRF	Tandem_Repeat	224873	225002	172	+	.	.
scaffold324	subtractBed	intrn	224879	225050	.	+	.	Parent=CGI_10016196;
	scaffold324	TRF	Tandem_Repeat	224879	225050	168	+	.	.
scaffold324	subtractBed	intrn	225062	225239	.	+	.	Parent=CGI_10016196;
	scaffold324	TRF	Tandem_Repeat	225062	225239	248	+	.	.
scaffold324	subtractBed	intrn	268152	268204	.	+	.	Parent=CGI_10016200;
	scaffold324	TRF	Tandem_Repeat	268152	268204	99	+	.	.
scaffold324	subtractBed	intrn	269375	269424	.	+	.	Parent=CGI_10016200;
	scaffold324	TRF	Tandem_Repeat	269375	269424	84	+	.	.
scaffold324	subtractBed	intrn	272131	272185	.	+	.	Parent=CGI_10016200;
	scaffold324	TRF	Tandem_Repeat	272131	272185	101	+	.	.
scaffold324	subtractBed	intrn	301158	301733	.	+	.	Parent=CGI_10016201;
	scaffold324	TRF	Tandem_Repeat	301122	301733	830	+	.	.
scaffold324	subtractBed	intrn	310730	310878	.	+	.	Parent=CGI_10016201;
	scaffold324	TRF	Tandem_Repeat	310730	310878	123	+	.	.
scaffold324	subtractBed	intrn	339624	339677	.	+	.	Parent=CGI_10016203;
	scaffold324	TRF	Tandem_Repeat	339624	339677	108	+	.	.
scaffold32470	subtractBed	intrn	1135	1563	.	+	.	Parent=CGI_10000898;
	scaffold32470	WUBlastX	LTR_Gypsy	1135	1563	91	-	.	.
scaffold32470	subtractBed	intrn	1269	1460	.	+	.	Parent=CGI_10000898;
	scaffold32470	WUBlastX	LTR_Gypsy	1269	1460	108	-	.	.
scaffold32470	subtractBed	intrn	1221	1442	.	+	.	Parent=CGI_10000898;
	scaffold32470	WUBlastX	LTR_Gypsy	1221	1442	95	-	.	.
scaffold326	subtractBed	intrn	406	1149	.	+	.	Parent=CGI_10003294;
	scaffold326	WUBlastX	DNA_TcMar-Tc1	406	1149	329	+	.	.
scaffold326	subtractBed	intrn	2944	2975	.	+	.	Parent=CGI_10003294;
	scaffold326	TRF	Tandem_Repeat	2944	2975	55	+	.	.
scaffold326	subtractBed	intrn	4514	6473	.	+	.	Parent=CGI_10003294;
	scaffold326	TRF	Tandem_Repeat	4514	6473	2226	+	.	.
scaffold326	subtractBed	intrn	5448	5490	.	+	.	Parent=CGI_10003294;
	scaffold326	TRF	Tandem_Repeat	5448	5490	59	+	.	.
scaffold326	subtractBed	intrn	5445	5493	.	+	.	Parent=CGI_10003294;
	scaffold326	TRF	Tandem_Repeat	5445	5493	62	+	.	.
scaffold326	subtractBed	intrn	6634	6711	.	+	.	Parent=CGI_10003294;
	scaffold326	TRF	Tandem_Repeat	6634	6711	52	+	.	.
scaffold326	subtractBed	intrn	2944	2975	.	-	.	Parent=CGI_10003295;
	scaffold326	TRF	Tandem_Repeat	2944	2975	55	+	.	.
scaffold326	subtractBed	intrn	4514	6473	.	-	.	Parent=CGI_10003295;
	scaffold326	TRF	Tandem_Repeat	4514	6473	2226	+	.	.
scaffold326	subtractBed	intrn	5448	5490	.	-	.	Parent=CGI_10003295;
	scaffold326	TRF	Tandem_Repeat	5448	5490	59	+	.	.
scaffold326	subtractBed	intrn	5445	5493	.	-	.	Parent=CGI_10003295;
	scaffold326	TRF	Tandem_Repeat	5445	5493	62	+	.	.
scaffold326	subtractBed	intrn	6634	6711	.	-	.	Parent=CGI_10003295;
	scaffold326	TRF	Tandem_Repeat	6634	6711	52	+	.	.
scaffold33036	subtractBed	intrn	5154	5209	.	+	.	Parent=CGI_10000985;
	scaffold33036	TRF	Tandem_Repeat	5154	5209	112	+	.	.
scaffold33036	subtractBed	intrn	11477	11571	.	+	.	Parent=CGI_10000985;
	scaffold33036	WUBlastX	DNA_TcMar-Marin	11477	11740	32	+	.	.
scaffold33082	subtractBed	intrn	6330	6572	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_RTE-X	6330	6572	130	-	.	.
scaffold33082	subtractBed	intrn	7483	7776	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_CR1-L2	7483	7776	65	-	.	.
scaffold33082	subtractBed	intrn	7465	8112	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_CR1	7465	8112	40	-	.	.
scaffold33082	subtractBed	intrn	6605	7423	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_RTE-X	6605	7423	493	-	.	.
scaffold33082	subtractBed	intrn	6219	6572	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_RTE-X	6219	6572	85	-	.	.
scaffold33082	subtractBed	intrn	7447	7728	.	+	.	Parent=CGI_10000988;
	scaffold33082	WUBlastX	LINE_RTE-X	7447	7728	162	-	.	.
scaffold331	subtractBed	intrn	55938	55989	.	+	.	Parent=CGI_10003715;
	scaffold331	TRF	Tandem_Repeat	55938	55989	104	+	.	.
scaffold331	subtractBed	intrn	56242	56273	.	+	.	Parent=CGI_10003715;
	scaffold331	TRF	Tandem_Repeat	56242	56273	64	+	.	.
scaffold331	subtractBed	intrn	56300	56333	.	+	.	Parent=CGI_10003715;
	scaffold331	TRF	Tandem_Repeat	56300	56333	68	+	.	.
scaffold332	subtractBed	intrn	122077	122120	.	-	.	Parent=CGI_10020878;
	scaffold332	TRF	Tandem_Repeat	122077	122120	88	+	.	.
scaffold332	subtractBed	intrn	140635	140668	.	-	.	Parent=CGI_10020879;
	scaffold332	TRF	Tandem_Repeat	140635	140668	52	+	.	.
scaffold332	subtractBed	intrn	283359	284297	.	-	.	Parent=CGI_10020880;
	scaffold332	WUBlastX	LINE_RTE-X	283359	284297	585	+	.	.
scaffold332	subtractBed	intrn	284345	285211	.	-	.	Parent=CGI_10020880;
	scaffold332	WUBlastX	LINE_RTE-X	284345	285211	344	+	.	.
scaffold332	subtractBed	intrn	283350	284498	.	-	.	Parent=CGI_10020880;
	scaffold332	WUBlastX	LINE_RTE-X	283350	284498	385	+	.	.
scaffold332	subtractBed	intrn	337828	337890	.	-	.	Parent=CGI_10020882;
	scaffold332	TRF	Tandem_Repeat	337828	337890	56	+	.	.
scaffold332	subtractBed	intrn	359802	359911	.	-	.	Parent=CGI_10020883;
	scaffold332	TRF	Tandem_Repeat	359802	359911	87	+	.	.
scaffold332	subtractBed	intrn	368188	368364	.	-	.	Parent=CGI_10020884;
	scaffold332	WUBlastX	DNA_TcMar-Marin	368188	368364	58	-	.	.
scaffold332	subtractBed	intrn	368424	368492	.	-	.	Parent=CGI_10020884;
	scaffold332	WUBlastX	DNA_TcMar-Marin	368424	368492	24	-	.	.
scaffold332	subtractBed	intrn	368182	368427	.	-	.	Parent=CGI_10020884;
	scaffold332	WUBlastX	DNA_TcMar-Marin	368182	368427	34	-	.	.
scaffold332	subtractBed	intrn	368609	368776	.	-	.	Parent=CGI_10020884;
	scaffold332	WUBlastX	DNA_TcMar-Marin	368609	368776	36	-	.	.
scaffold332	subtractBed	intrn	372921	372960	.	+	.	Parent=CGI_10020885;
	scaffold332	TRF	Tandem_Repeat	372921	372960	71	+	.	.
scaffold332	subtractBed	intrn	373058	373111	.	+	.	Parent=CGI_10020885;
	scaffold332	TRF	Tandem_Repeat	373058	373111	108	+	.	.
scaffold332	subtractBed	intrn	393118	393168	.	+	.	Parent=CGI_10020885;
	scaffold332	TRF	Tandem_Repeat	393118	393168	102	+	.	.
scaffold332	subtractBed	intrn	393272	393312	.	+	.	Parent=CGI_10020885;
	scaffold332	TRF	Tandem_Repeat	393272	393312	82	+	.	.
scaffold332	subtractBed	intrn	404655	407564	.	+	.	Parent=CGI_10020886;
	scaffold332	WUBlastX	LINE_L1-Tx1	404655	407564	1091	+	.	.
scaffold332	subtractBed	intrn	408121	408456	.	+	.	Parent=CGI_10020886;
	scaffold332	WUBlastX	LINE_L1-Tx1	408121	408456	20	+	.	.
scaffold332	subtractBed	intrn	404610	404897	.	+	.	Parent=CGI_10020886;
	scaffold332	WUBlastX	LINE_Zorro	404610	404897	24	+	.	.
scaffold332	subtractBed	intrn	411163	411621	.	+	.	Parent=CGI_10020886;
	scaffold332	WUBlastX	LTR_Ngaro	411163	411621	48	-	.	.
scaffold332	subtractBed	intrn	411163	411711	.	+	.	Parent=CGI_10020886;
	scaffold332	WUBlastX	LTR_Ngaro	411163	411711	31	-	.	.
scaffold332	subtractBed	intrn	546554	547100	.	+	.	Parent=CGI_10020890;
	scaffold332	TRF	Tandem_Repeat	546554	547100	639	+	.	.
scaffold332	subtractBed	intrn	547988	548233	.	+	.	Parent=CGI_10020890;
	scaffold332	TRF	Tandem_Repeat	547988	548233	312	+	.	.
scaffold332	subtractBed	intrn	618499	618540	.	-	.	Parent=CGI_10020894;
	scaffold332	TRF	Tandem_Repeat	618499	618540	59	+	.	.
scaffold332	subtractBed	intrn	619019	619044	.	-	.	Parent=CGI_10020894;
	scaffold332	TRF	Tandem_Repeat	619019	619044	52	+	.	.
scaffold332	subtractBed	intrn	656694	656779	.	-	.	Parent=CGI_10020895;
	scaffold332	TRF	Tandem_Repeat	656694	656779	95	+	.	.
scaffold332	subtractBed	intrn	656690	656771	.	-	.	Parent=CGI_10020895;
	scaffold332	TRF	Tandem_Repeat	656690	656771	137	+	.	.
scaffold33242	subtractBed	intrn	2211	2242	.	-	.	Parent=CGI_10001015;
	scaffold33242	TRF	Tandem_Repeat	2211	2242	64	+	.	.
scaffold33352	subtractBed	intrn	5356	5397	.	+	.	Parent=CGI_10001052;
	scaffold33352	TRF	Tandem_Repeat	5356	5397	84	+	.	.
scaffold334	subtractBed	intrn	18120	18959	.	+	.	Parent=CGI_10025907;
	scaffold334	TRF	Tandem_Repeat	18120	18959	896	+	.	.
scaffold334	subtractBed	intrn	56062	56117	.	-	.	Parent=CGI_10025908;
	scaffold334	TRF	Tandem_Repeat	56062	56117	112	+	.	.
scaffold334	subtractBed	intrn	64558	65256	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	64558	65256	1071	+	.	.
scaffold334	subtractBed	intrn	67308	67566	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	67308	67566	419	+	.	.
scaffold334	subtractBed	intrn	67308	67665	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	67308	67665	452	+	.	.
scaffold334	subtractBed	intrn	67308	67665	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	67308	67665	452	+	.	.
scaffold334	subtractBed	intrn	67565	67665	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	67565	67665	107	+	.	.
scaffold334	subtractBed	intrn	68220	69308	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	68220	69308	806	+	.	.
scaffold334	subtractBed	intrn	68857	68947	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	68857	68947	64	+	.	.
scaffold334	subtractBed	intrn	69416	69815	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	69416	69815	444	+	.	.
scaffold334	subtractBed	intrn	72460	72820	.	+	.	Parent=CGI_10025909;
	scaffold334	TRF	Tandem_Repeat	72460	72820	521	+	.	.
scaffold334	subtractBed	intrn	85414	85709	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	85414	85709	304	+	.	.
scaffold334	subtractBed	intrn	90311	90994	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	90311	90994	1019	+	.	.
scaffold334	subtractBed	intrn	91590	92053	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	91590	92053	490	+	.	.
scaffold334	subtractBed	intrn	92450	92704	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	92450	92704	251	+	.	.
scaffold334	subtractBed	intrn	93284	93308	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	93284	93308	50	+	.	.
scaffold334	subtractBed	intrn	95905	96102	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	95905	96102	308	+	.	.
scaffold334	subtractBed	intrn	96176	96643	.	-	.	Parent=CGI_10025910;
	scaffold334	TRF	Tandem_Repeat	96176	96643	467	+	.	.
scaffold334	subtractBed	intrn	104482	104595	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	104303	104737	113	-	.	.
scaffold334	subtractBed	intrn	104737	104737	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	104303	104737	113	-	.	.
scaffold334	subtractBed	intrn	105478	105479	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	105478	105606	52	-	.	.
scaffold334	subtractBed	intrn	107061	107062	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	107061	107180	48	-	.	.
scaffold334	subtractBed	intrn	106701	106701	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	106504	106701	110	-	.	.
scaffold334	subtractBed	intrn	107528	107539	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	107528	107806	133	-	.	.
scaffold334	subtractBed	intrn	107943	107945	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	107943	108047	40	-	.	.
scaffold334	subtractBed	intrn	108043	108047	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	107943	108047	40	-	.	.
scaffold334	subtractBed	intrn	110383	110453	.	-	.	Parent=CGI_10025911;
	scaffold334	TRF	Tandem_Repeat	110383	110651	511	+	.	.
scaffold334	subtractBed	intrn	109174	109200	.	-	.	Parent=CGI_10025911;
	scaffold334	WUBlastX	DNA_hAT	109000	109200	124	-	.	.
scaffold334	subtractBed	intrn	110504	110651	.	-	.	Parent=CGI_10025911;
	scaffold334	TRF	Tandem_Repeat	110383	110651	511	+	.	.
scaffold334	subtractBed	intrn	125332	125838	.	+	.	Parent=CGI_10025912;
	scaffold334	TRF	Tandem_Repeat	125332	125838	539	+	.	.
scaffold334	subtractBed	intrn	172342	172397	.	+	.	Parent=CGI_10025919;
	scaffold334	TRF	Tandem_Repeat	172342	172397	112	+	.	.
scaffold334	subtractBed	intrn	177695	178656	.	+	.	Parent=CGI_10025919;
	scaffold334	TRF	Tandem_Repeat	177695	178656	1336	+	.	.
scaffold334	subtractBed	intrn	179674	179798	.	+	.	Parent=CGI_10025919;
	scaffold334	TRF	Tandem_Repeat	179674	179798	101	+	.	.
scaffold334	subtractBed	intrn	179674	179816	.	+	.	Parent=CGI_10025919;
	scaffold334	TRF	Tandem_Repeat	179674	179816	103	+	.	.
scaffold334	subtractBed	intrn	204153	204326	.	-	.	Parent=CGI_10025922;
	scaffold334	TRF	Tandem_Repeat	204153	204326	177	+	.	.
scaffold334	subtractBed	intrn	204142	204493	.	-	.	Parent=CGI_10025922;
	scaffold334	TRF	Tandem_Repeat	204142	204493	337	+	.	.
scaffold334	subtractBed	intrn	204297	204524	.	-	.	Parent=CGI_10025922;
	scaffold334	TRF	Tandem_Repeat	204297	204524	181	+	.	.
scaffold334	subtractBed	intrn	207177	207229	.	-	.	Parent=CGI_10025922;
	scaffold334	TRF	Tandem_Repeat	207177	207229	106	+	.	.
scaffold334	subtractBed	intrn	216274	217827	.	-	.	Parent=CGI_10025923;
	scaffold334	TRF	Tandem_Repeat	216274	217827	1697	+	.	.
scaffold334	subtractBed	intrn	218067	219102	.	-	.	Parent=CGI_10025923;
	scaffold334	TRF	Tandem_Repeat	218067	219102	1589	+	.	.
scaffold334	subtractBed	intrn	226726	226904	.	+	.	Parent=CGI_10025924;
	scaffold334	TRF	Tandem_Repeat	226726	226904	90	+	.	.
scaffold334	subtractBed	intrn	226745	226904	.	+	.	Parent=CGI_10025924;
	scaffold334	TRF	Tandem_Repeat	226745	226904	212	+	.	.
scaffold334	subtractBed	intrn	242313	242364	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	242313	242364	104	+	.	.
scaffold334	subtractBed	intrn	242369	242874	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	242369	242874	764	+	.	.
scaffold334	subtractBed	intrn	252801	252987	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	252801	252987	330	+	.	.
scaffold334	subtractBed	intrn	256496	256533	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	256496	256533	58	+	.	.
scaffold334	subtractBed	intrn	256496	256540	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	256496	256540	54	+	.	.
scaffold334	subtractBed	intrn	256580	256630	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	256580	256630	102	+	.	.
scaffold334	subtractBed	intrn	260270	261373	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	260270	261373	1049	+	.	.
scaffold334	subtractBed	intrn	260270	261373	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	260270	261373	1177	+	.	.
scaffold334	subtractBed	intrn	263288	263327	.	-	.	Parent=CGI_10025926;
	scaffold334	TRF	Tandem_Repeat	263288	263327	55	+	.	.
scaffold334	subtractBed	intrn	282812	282859	.	-	.	Parent=CGI_10025927;
	scaffold334	TRF	Tandem_Repeat	282812	282859	96	+	.	.
scaffold334	subtractBed	intrn	298636	298871	.	+	.	Parent=CGI_10025928;
	scaffold334	TRF	Tandem_Repeat	298636	298871	141	+	.	.
scaffold334	subtractBed	intrn	318798	319454	.	+	.	Parent=CGI_10025930;
	scaffold334	WUBlastX	DNA_hAT	318798	319454	207	+	.	.
scaffold334	subtractBed	intrn	319707	320102	.	+	.	Parent=CGI_10025930;
	scaffold334	WUBlastX	DNA_hAT	319707	320102	32	+	.	.
scaffold334	subtractBed	intrn	336202	336244	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	336202	336244	54	+	.	.
scaffold334	subtractBed	intrn	336410	337729	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	336410	337729	1574	+	.	.
scaffold334	subtractBed	intrn	336410	337756	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	336410	337756	1576	+	.	.
scaffold334	subtractBed	intrn	343414	343836	.	+	.	Parent=CGI_10025933;
	scaffold334	WUBlastX	LINE_RTE-X	343414	343836	132	+	.	.
scaffold334	subtractBed	intrn	343312	343848	.	+	.	Parent=CGI_10025933;
	scaffold334	WUBlastX	LINE_RTE-X	343312	343848	96	+	.	.
scaffold334	subtractBed	intrn	346212	346263	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	346212	346263	104	+	.	.
scaffold334	subtractBed	intrn	346264	346301	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	346264	346301	76	+	.	.
scaffold334	subtractBed	intrn	351239	351277	.	+	.	Parent=CGI_10025933;
	scaffold334	TRF	Tandem_Repeat	351239	351277	78	+	.	.
scaffold334	subtractBed	intrn	359973	360020	.	-	.	Parent=CGI_10025934;
	scaffold334	TRF	Tandem_Repeat	359973	360020	80	+	.	.
scaffold334	subtractBed	intrn	361236	361333	.	-	.	Parent=CGI_10025934;
	scaffold334	TRF	Tandem_Repeat	361236	361333	151	+	.	.
scaffold334	subtractBed	intrn	375713	375985	.	-	.	Parent=CGI_10025936;
	scaffold334	TRF	Tandem_Repeat	375713	375985	372	+	.	.
scaffold334	subtractBed	intrn	424983	425561	.	-	.	Parent=CGI_10025937;
	scaffold334	TRF	Tandem_Repeat	424974	425561	745	+	.	.
scaffold334	subtractBed	intrn	431838	432070	.	-	.	Parent=CGI_10025937;
	scaffold334	TRF	Tandem_Repeat	431814	432070	408	+	.	.
scaffold334	subtractBed	intrn	424983	425561	.	+	.	Parent=CGI_10025938;
	scaffold334	TRF	Tandem_Repeat	424974	425561	745	+	.	.
scaffold334	subtractBed	intrn	431838	432070	.	+	.	Parent=CGI_10025938;
	scaffold334	TRF	Tandem_Repeat	431814	432070	408	+	.	.
scaffold334	subtractBed	intrn	440375	440538	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	440375	440546	317	+	.	.
scaffold334	subtractBed	intrn	442287	442787	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	442244	442787	935	+	.	.
scaffold334	subtractBed	intrn	443517	443754	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	443517	443769	398	+	.	.
scaffold334	subtractBed	intrn	447603	447872	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	447603	447872	434	+	.	.
scaffold334	subtractBed	intrn	454132	455123	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	454132	455123	1140	+	.	.
scaffold334	subtractBed	intrn	454132	456071	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	454132	456071	1405	+	.	.
scaffold334	subtractBed	intrn	455130	455445	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	455130	455445	355	+	.	.
scaffold334	subtractBed	intrn	455443	456071	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	455443	456071	650	+	.	.
scaffold334	subtractBed	intrn	455443	456071	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	455443	456071	683	+	.	.
scaffold334	subtractBed	intrn	459039	459620	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	459039	459620	317	+	.	.
scaffold334	subtractBed	intrn	462665	462935	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	462665	462935	492	+	.	.
scaffold334	subtractBed	intrn	462896	463615	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	462896	463615	675	+	.	.
scaffold334	subtractBed	intrn	462697	463615	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	462697	463615	608	+	.	.
scaffold334	subtractBed	intrn	462831	463615	.	-	.	Parent=CGI_10025939;
	scaffold334	TRF	Tandem_Repeat	462831	463615	715	+	.	.
scaffold334	subtractBed	intrn	477595	477759	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	477595	477766	326	+	.	.
scaffold334	subtractBed	intrn	478456	478945	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	478456	478945	474	+	.	.
scaffold334	subtractBed	intrn	478456	478945	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	478456	478945	337	+	.	.
scaffold334	subtractBed	intrn	478456	478945	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	478456	478945	445	+	.	.
scaffold334	subtractBed	intrn	481951	482002	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	481951	482002	63	+	.	.
scaffold334	subtractBed	intrn	482064	483568	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	482064	483568	1414	+	.	.
scaffold334	subtractBed	intrn	482061	483477	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	482061	483477	557	+	.	.
scaffold334	subtractBed	intrn	482073	483535	.	+	.	Parent=CGI_10025940;
	scaffold334	TRF	Tandem_Repeat	482073	483535	863	+	.	.
scaffold334	subtractBed	intrn	502880	503792	.	+	.	Parent=CGI_10025943;
	scaffold334	TRF	Tandem_Repeat	502880	503792	1092	+	.	.
scaffold334	subtractBed	intrn	519858	520044	.	+	.	Parent=CGI_10025945;
	scaffold334	TRF	Tandem_Repeat	519849	520044	247	+	.	.
scaffold334	subtractBed	intrn	522187	522946	.	+	.	Parent=CGI_10025945;
	scaffold334	TRF	Tandem_Repeat	522187	522946	1216	+	.	.
scaffold334	subtractBed	intrn	527798	528082	.	+	.	Parent=CGI_10025945;
	scaffold334	TRF	Tandem_Repeat	527798	528082	137	+	.	.
scaffold334	subtractBed	intrn	530246	531516	.	+	.	Parent=CGI_10025945;
	scaffold334	TRF	Tandem_Repeat	530246	531516	1982	+	.	.
scaffold334	subtractBed	intrn	530246	531516	.	+	.	Parent=CGI_10025945;
	scaffold334	TRF	Tandem_Repeat	530246	531516	2018	+	.	.
scaffold334	subtractBed	intrn	533430	535162	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	533430	535162	2619	+	.	.
scaffold334	subtractBed	intrn	537007	537562	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	537007	537562	1031	+	.	.
scaffold334	subtractBed	intrn	539024	539222	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	539024	539222	289	+	.	.
scaffold334	subtractBed	intrn	548187	548652	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	548187	548652	491	+	.	.
scaffold334	subtractBed	intrn	548187	548652	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	548187	548652	575	+	.	.
scaffold334	subtractBed	intrn	552821	552857	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	552821	552857	74	+	.	.
scaffold334	subtractBed	intrn	552951	553282	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	552951	554038	890	+	.	.
scaffold334	subtractBed	intrn	552951	553282	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	552951	554038	463	+	.	.
scaffold334	subtractBed	intrn	553221	553282	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	553221	554038	936	+	.	.
scaffold334	subtractBed	intrn	553856	554038	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	552951	554038	890	+	.	.
scaffold334	subtractBed	intrn	553856	554038	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	552951	554038	463	+	.	.
scaffold334	subtractBed	intrn	553856	554038	.	+	.	Parent=CGI_10025946;
	scaffold334	TRF	Tandem_Repeat	553221	554038	936	+	.	.
scaffold334	subtractBed	intrn	568795	569278	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	568795	569278	887	+	.	.
scaffold334	subtractBed	intrn	568795	569709	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	568795	569709	1532	+	.	.
scaffold334	subtractBed	intrn	568795	569709	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	568795	569709	1541	+	.	.
scaffold334	subtractBed	intrn	569275	569709	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	569275	569709	780	+	.	.
scaffold334	subtractBed	intrn	569566	569707	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	569566	569707	76	+	.	.
scaffold334	subtractBed	intrn	569540	569681	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	569540	569681	97	+	.	.
scaffold334	subtractBed	intrn	573124	573653	.	-	.	Parent=CGI_10025949;
	scaffold334	TRF	Tandem_Repeat	573124	573653	445	+	.	.
scaffold334	subtractBed	intrn	623048	623274	.	+	.	Parent=CGI_10025954;
	scaffold334	TRF	Tandem_Repeat	623048	623274	375	+	.	.
scaffold334	subtractBed	intrn	631593	631630	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	631593	631630	51	+	.	.
scaffold334	subtractBed	intrn	635773	635815	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	635773	635815	86	+	.	.
scaffold334	subtractBed	intrn	639599	640004	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	639599	640004	614	+	.	.
scaffold334	subtractBed	intrn	639968	640157	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	639968	640157	133	+	.	.
scaffold334	subtractBed	intrn	640040	640358	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	640040	640358	523	+	.	.
scaffold334	subtractBed	intrn	639822	640944	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	639822	640944	641	+	.	.
scaffold334	subtractBed	intrn	640246	640435	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	640246	640435	124	+	.	.
scaffold334	subtractBed	intrn	640271	641017	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	640271	641017	403	+	.	.
scaffold334	subtractBed	intrn	644477	644515	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	644477	644515	60	+	.	.
scaffold334	subtractBed	intrn	646134	646263	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	646134	646263	93	+	.	.
scaffold334	subtractBed	intrn	646179	646325	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	646179	646325	73	+	.	.
scaffold334	subtractBed	intrn	647673	647710	.	-	.	Parent=CGI_10025955;
	scaffold334	TRF	Tandem_Repeat	647673	647710	60	+	.	.
scaffold334	subtractBed	intrn	652896	652936	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	652896	652936	75	+	.	.
scaffold334	subtractBed	intrn	653788	654229	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	653788	654229	486	+	.	.
scaffold334	subtractBed	intrn	653788	654398	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	653788	654398	470	+	.	.
scaffold334	subtractBed	intrn	653788	654229	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	653788	654229	473	+	.	.
scaffold334	subtractBed	intrn	654231	654398	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	654231	654398	228	+	.	.
scaffold334	subtractBed	intrn	656599	657221	.	+	.	Parent=CGI_10025956;
	scaffold334	TRF	Tandem_Repeat	656582	657221	863	+	.	.
scaffold334	subtractBed	intrn	673042	673310	.	-	.	Parent=CGI_10025957;
	scaffold334	TRF	Tandem_Repeat	673042	673310	475	+	.	.
scaffold334	subtractBed	intrn	705397	706060	.	-	.	Parent=CGI_10025959;
	scaffold334	TRF	Tandem_Repeat	705397	706060	468	+	.	.
scaffold334	subtractBed	intrn	708162	708282	.	-	.	Parent=CGI_10025959;
	scaffold334	TRF	Tandem_Repeat	708162	708282	188	+	.	.
scaffold334	subtractBed	intrn	710536	710611	.	-	.	Parent=CGI_10025959;
	scaffold334	TRF	Tandem_Repeat	710536	710611	91	+	.	.
scaffold334	subtractBed	intrn	710522	710611	.	-	.	Parent=CGI_10025959;
	scaffold334	TRF	Tandem_Repeat	710522	710611	67	+	.	.
scaffold334	subtractBed	intrn	707481	707621	.	-	.	Parent=CGI_10025959;
	scaffold334	WUBlastX	DNA_Harbinger	707481	707621	69	+	.	.
scaffold334	subtractBed	intrn	707900	708046	.	-	.	Parent=CGI_10025959;
	scaffold334	WUBlastX	DNA_Harbinger	707900	708046	36	+	.	.
scaffold334	subtractBed	intrn	705397	706060	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	705397	706060	468	+	.	.
scaffold334	subtractBed	intrn	708162	708282	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	708162	708282	188	+	.	.
scaffold334	subtractBed	intrn	710536	710611	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	710536	710611	91	+	.	.
scaffold334	subtractBed	intrn	710522	710611	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	710522	710611	67	+	.	.
scaffold334	subtractBed	intrn	707481	707621	.	+	.	Parent=CGI_10025960;
	scaffold334	WUBlastX	DNA_Harbinger	707481	707621	69	+	.	.
scaffold334	subtractBed	intrn	707900	708046	.	+	.	Parent=CGI_10025960;
	scaffold334	WUBlastX	DNA_Harbinger	707900	708046	36	+	.	.
scaffold334	subtractBed	intrn	714922	714956	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	714922	714956	52	+	.	.
scaffold334	subtractBed	intrn	716034	716100	.	+	.	Parent=CGI_10025960;
	scaffold334	TRF	Tandem_Repeat	716034	716100	71	+	.	.
scaffold334	subtractBed	intrn	749920	751443	.	-	.	Parent=CGI_10025961;
	scaffold334	TRF	Tandem_Repeat	749920	751443	2264	+	.	.
scaffold334	subtractBed	intrn	749920	751443	.	-	.	Parent=CGI_10025961;
	scaffold334	TRF	Tandem_Repeat	749920	751443	2262	+	.	.
scaffold334	subtractBed	intrn	773298	773391	.	-	.	Parent=CGI_10025962;
	scaffold334	TRF	Tandem_Repeat	773298	773391	107	+	.	.
scaffold334	subtractBed	intrn	773470	773608	.	-	.	Parent=CGI_10025962;
	scaffold334	TRF	Tandem_Repeat	773470	773608	149	+	.	.
scaffold334	subtractBed	intrn	773660	773824	.	-	.	Parent=CGI_10025962;
	scaffold334	TRF	Tandem_Repeat	773660	773824	179	+	.	.
scaffold334	subtractBed	intrn	773896	773987	.	-	.	Parent=CGI_10025962;
	scaffold334	TRF	Tandem_Repeat	773896	773987	105	+	.	.
scaffold334	subtractBed	intrn	777648	778211	.	-	.	Parent=CGI_10025962;
	scaffold334	TRF	Tandem_Repeat	777648	778211	756	+	.	.
scaffold334	subtractBed	intrn	787946	788860	.	-	.	Parent=CGI_10025962;
	scaffold334	WUBlastX	LTR_Ngaro	787946	788860	404	-	.	.
scaffold334	subtractBed	intrn	788851	789570	.	-	.	Parent=CGI_10025962;
	scaffold334	WUBlastX	LTR_Ngaro	788851	789570	521	-	.	.
scaffold334	subtractBed	intrn	789572	789574	.	-	.	Parent=CGI_10025962;
	scaffold334	WUBlastX	LTR_Ngaro	789572	790372	520	-	.	.
scaffold334	subtractBed	intrn	864768	864835	.	-	.	Parent=CGI_10025964;
	scaffold334	TRF	Tandem_Repeat	864768	864835	127	+	.	.
scaffold334	subtractBed	intrn	869105	869265	.	-	.	Parent=CGI_10025964;
	scaffold334	TRF	Tandem_Repeat	869105	869265	313	+	.	.
scaffold334	subtractBed	intrn	884511	884538	.	-	.	Parent=CGI_10025965;
	scaffold334	TRF	Tandem_Repeat	884511	884538	56	+	.	.
scaffold334	subtractBed	intrn	894679	894734	.	-	.	Parent=CGI_10025965;
	scaffold334	TRF	Tandem_Repeat	894679	894734	112	+	.	.
scaffold334	subtractBed	intrn	902886	902958	.	-	.	Parent=CGI_10025965;
	scaffold334	TRF	Tandem_Repeat	902886	902958	125	+	.	.
scaffold334	subtractBed	intrn	1034627	1034660	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1034627	1034660	52	+	.	.
scaffold334	subtractBed	intrn	1035407	1035470	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1035407	1035470	50	+	.	.
scaffold334	subtractBed	intrn	1037133	1037194	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1037133	1037194	63	+	.	.
scaffold334	subtractBed	intrn	1037140	1037191	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1037140	1037191	59	+	.	.
scaffold334	subtractBed	intrn	1046169	1046279	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1046169	1046279	65	+	.	.
scaffold334	subtractBed	intrn	1046546	1048225	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1046546	1048225	332	+	.	.
scaffold334	subtractBed	intrn	1046272	1047297	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1046272	1047297	166	+	.	.
scaffold334	subtractBed	intrn	1046142	1046270	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1046142	1046270	41	+	.	.
scaffold334	subtractBed	intrn	1046073	1046276	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1046073	1046276	28	+	.	.
scaffold334	subtractBed	intrn	1048227	1048457	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1	1048227	1048457	58	+	.	.
scaffold334	subtractBed	intrn	1049133	1049228	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1049133	1049228	25	+	.	.
scaffold334	subtractBed	intrn	1048230	1048769	.	-	.	Parent=CGI_10025971;
	scaffold334	WUBlastX	LINE_L1-Tx1	1048230	1048769	44	+	.	.
scaffold334	subtractBed	intrn	1060047	1060866	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1060047	1060866	959	+	.	.
scaffold334	subtractBed	intrn	1061041	1061086	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1061041	1061086	56	+	.	.
scaffold334	subtractBed	intrn	1061404	1062400	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1061404	1062400	1341	+	.	.
scaffold334	subtractBed	intrn	1065891	1066289	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1065891	1066289	465	+	.	.
scaffold334	subtractBed	intrn	1066887	1067331	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1066887	1067331	550	+	.	.
scaffold334	subtractBed	intrn	1067554	1067810	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1067554	1067810	266	+	.	.
scaffold334	subtractBed	intrn	1067803	1067985	.	-	.	Parent=CGI_10025971;
	scaffold334	TRF	Tandem_Repeat	1067803	1067985	312	+	.	.
scaffold33462	subtractBed	intrn	7182	7217	.	+	.	Parent=CGI_10001068;
	scaffold33462	TRF	Tandem_Repeat	7182	7217	63	+	.	.
scaffold33466	subtractBed	intrn	7326	7511	.	-	.	Parent=CGI_10001069;
	scaffold33466	WUBlastX	LINE_CR1	7326	7511	28	+	.	.
scaffold335	subtractBed	intrn	22194	22237	.	-	.	Parent=CGI_10017082;
	scaffold335	TRF	Tandem_Repeat	22194	22237	88	+	.	.
scaffold335	subtractBed	intrn	36628	38012	.	-	.	Parent=CGI_10017083;
	scaffold335	TRF	Tandem_Repeat	36628	38012	1887	+	.	.
scaffold335	subtractBed	intrn	52257	52562	.	-	.	Parent=CGI_10017083;
	scaffold335	WUBlastX	LTR_DIRS	52257	52562	154	-	.	.
scaffold335	subtractBed	intrn	51363	52499	.	-	.	Parent=CGI_10017083;
	scaffold335	WUBlastX	LTR_DIRS	51363	52499	293	-	.	.
scaffold335	subtractBed	intrn	51229	51369	.	-	.	Parent=CGI_10017083;
	scaffold335	WUBlastX	LTR_DIRS	51229	51369	46	-	.	.
scaffold335	subtractBed	intrn	64287	64345	.	+	.	Parent=CGI_10017084;
	scaffold335	TRF	Tandem_Repeat	64287	64345	118	+	.	.
scaffold335	subtractBed	intrn	74727	74929	.	+	.	Parent=CGI_10017084;
	scaffold335	TRF	Tandem_Repeat	74727	74929	270	+	.	.
scaffold335	subtractBed	intrn	74727	74929	.	-	.	Parent=CGI_10017085;
	scaffold335	TRF	Tandem_Repeat	74727	74929	270	+	.	.
scaffold335	subtractBed	intrn	76236	76277	.	-	.	Parent=CGI_10017085;
	scaffold335	TRF	Tandem_Repeat	76236	76277	84	+	.	.
scaffold335	subtractBed	intrn	77733	77759	.	-	.	Parent=CGI_10017085;
	scaffold335	TRF	Tandem_Repeat	77733	77759	54	+	.	.
scaffold335	subtractBed	intrn	78748	78830	.	-	.	Parent=CGI_10017085;
	scaffold335	TRF	Tandem_Repeat	78748	78830	159	+	.	.
scaffold335	subtractBed	intrn	86015	86182	.	-	.	Parent=CGI_10017087;
	scaffold335	TRF	Tandem_Repeat	86015	86182	167	+	.	.
scaffold335	subtractBed	intrn	107434	107663	.	-	.	Parent=CGI_10017090;
	scaffold335	TRF	Tandem_Repeat	107434	107663	83	+	.	.
scaffold335	subtractBed	intrn	170726	170751	.	-	.	Parent=CGI_10017092;
	scaffold335	TRF	Tandem_Repeat	170726	170751	52	+	.	.
scaffold335	subtractBed	intrn	176402	176609	.	-	.	Parent=CGI_10017092;
	scaffold335	TRF	Tandem_Repeat	176402	176609	407	+	.	.
scaffold335	subtractBed	intrn	177047	177316	.	-	.	Parent=CGI_10017092;
	scaffold335	TRF	Tandem_Repeat	177047	177316	540	+	.	.
scaffold335	subtractBed	intrn	193278	193324	.	-	.	Parent=CGI_10017094;
	scaffold335	TRF	Tandem_Repeat	193278	193324	94	+	.	.
scaffold335	subtractBed	intrn	237778	237825	.	+	.	Parent=CGI_10017098;
	scaffold335	TRF	Tandem_Repeat	237778	237825	60	+	.	.
scaffold335	subtractBed	intrn	254532	254715	.	-	.	Parent=CGI_10017099;
	scaffold335	TRF	Tandem_Repeat	254532	254715	151	+	.	.
scaffold335	subtractBed	intrn	264779	264913	.	-	.	Parent=CGI_10017099;
	scaffold335	TRF	Tandem_Repeat	264779	264913	200	+	.	.
scaffold335	subtractBed	intrn	271399	271447	.	-	.	Parent=CGI_10017099;
	scaffold335	TRF	Tandem_Repeat	271399	271447	98	+	.	.
scaffold335	subtractBed	intrn	287436	287505	.	+	.	Parent=CGI_10017101;
	scaffold335	TRF	Tandem_Repeat	287436	287505	96	+	.	.
scaffold335	subtractBed	intrn	287437	287502	.	+	.	Parent=CGI_10017101;
	scaffold335	TRF	Tandem_Repeat	287437	287502	71	+	.	.
scaffold335	subtractBed	intrn	292310	293059	.	+	.	Parent=CGI_10017101;
	scaffold335	TRF	Tandem_Repeat	292310	293059	1021	+	.	.
scaffold335	subtractBed	intrn	307292	307596	.	-	.	Parent=CGI_10017102;
	scaffold335	TRF	Tandem_Repeat	307292	307596	271	+	.	.
scaffold335	subtractBed	intrn	328483	328770	.	+	.	Parent=CGI_10017103;
	scaffold335	TRF	Tandem_Repeat	328483	328770	305	+	.	.
scaffold335	subtractBed	intrn	331807	332072	.	+	.	Parent=CGI_10017103;
	scaffold335	TRF	Tandem_Repeat	331807	332072	171	+	.	.
scaffold335	subtractBed	intrn	332108	332490	.	+	.	Parent=CGI_10017103;
	scaffold335	TRF	Tandem_Repeat	332108	332490	650	+	.	.
scaffold335	subtractBed	intrn	332108	332490	.	+	.	Parent=CGI_10017103;
	scaffold335	TRF	Tandem_Repeat	332108	332490	653	+	.	.
scaffold335	subtractBed	intrn	332108	332490	.	+	.	Parent=CGI_10017103;
	scaffold335	TRF	Tandem_Repeat	332108	332490	650	+	.	.
scaffold335	subtractBed	intrn	382767	382826	.	-	.	Parent=CGI_10017105;
	scaffold335	TRF	Tandem_Repeat	382767	382826	77	+	.	.
scaffold335	subtractBed	intrn	383982	384590	.	-	.	Parent=CGI_10017105;
	scaffold335	WUBlastX	LINE_L1-Tx1	383982	384590	75	-	.	.
scaffold335	subtractBed	intrn	382938	384443	.	-	.	Parent=CGI_10017105;
	scaffold335	WUBlastX	LINE_L1-Tx1	382938	384443	347	-	.	.
scaffold335	subtractBed	intrn	385063	385063	.	-	.	Parent=CGI_10017105;
	scaffold335	WUBlastX	LINE_L1	385063	385233	25	-	.	.
scaffold335	subtractBed	intrn	385169	385233	.	-	.	Parent=CGI_10017105;
	scaffold335	WUBlastX	LINE_L1	385063	385233	25	-	.	.
scaffold335	subtractBed	intrn	427450	427492	.	+	.	Parent=CGI_10017108;
	scaffold335	TRF	Tandem_Repeat	427450	427492	86	+	.	.
scaffold335	subtractBed	intrn	433372	433433	.	+	.	Parent=CGI_10017108;
	scaffold335	TRF	Tandem_Repeat	433372	433433	124	+	.	.
scaffold335	subtractBed	intrn	449833	449881	.	+	.	Parent=CGI_10017109;
	scaffold335	TRF	Tandem_Repeat	449833	449881	98	+	.	.
scaffold336	subtractBed	intrn	110607	110644	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	110607	110644	67	+	.	.
scaffold336	subtractBed	intrn	119767	120944	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	119767	120944	1263	+	.	.
scaffold336	subtractBed	intrn	121627	121913	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	121627	121913	409	+	.	.
scaffold336	subtractBed	intrn	123769	123798	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	123769	123798	51	+	.	.
scaffold336	subtractBed	intrn	123812	123836	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	123812	123836	50	+	.	.
scaffold336	subtractBed	intrn	134773	134805	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	134773	134805	66	+	.	.
scaffold336	subtractBed	intrn	140110	140427	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	140110	140427	385	+	.	.
scaffold336	subtractBed	intrn	141427	141634	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	141420	141634	351	+	.	.
scaffold336	subtractBed	intrn	143910	143935	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	143910	143935	52	+	.	.
scaffold336	subtractBed	intrn	143949	143991	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	143949	143991	86	+	.	.
scaffold336	subtractBed	intrn	146013	146059	.	+	.	Parent=CGI_10012565;
	scaffold336	TRF	Tandem_Repeat	146013	146059	94	+	.	.
scaffold336	subtractBed	intrn	165383	166067	.	-	.	Parent=CGI_10012567;
	scaffold336	TRF	Tandem_Repeat	165383	166067	752	+	.	.
scaffold336	subtractBed	intrn	169027	169070	.	-	.	Parent=CGI_10012567;
	scaffold336	TRF	Tandem_Repeat	169027	169070	88	+	.	.
scaffold336	subtractBed	intrn	169209	169739	.	-	.	Parent=CGI_10012567;
	scaffold336	WUBlastX	LINE_RTE-X	169209	169739	178	+	.	.
scaffold336	subtractBed	intrn	169721	169804	.	-	.	Parent=CGI_10012567;
	scaffold336	WUBlastX	LINE_RTE-X	169721	169804	36	+	.	.
scaffold336	subtractBed	intrn	198449	198513	.	+	.	Parent=CGI_10012568;
	scaffold336	TRF	Tandem_Repeat	198449	198513	112	+	.	.
scaffold336	subtractBed	intrn	199104	199547	.	+	.	Parent=CGI_10012568;
	scaffold336	WUBlastX	LINE_L2	199104	199547	133	-	.	.
scaffold336	subtractBed	intrn	202962	203799	.	+	.	Parent=CGI_10012568;
	scaffold336	TRF	Tandem_Repeat	202962	203799	754	+	.	.
scaffold336	subtractBed	intrn	211862	211983	.	-	.	Parent=CGI_10012569;
	scaffold336	TRF	Tandem_Repeat	211862	211983	217	+	.	.
scaffold336	subtractBed	intrn	216114	216233	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_RTE-X	216114	216233	50	-	.	.
scaffold336	subtractBed	intrn	216723	217247	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_CR1	216723	217247	77	-	.	.
scaffold336	subtractBed	intrn	216957	217439	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_CR1	216957	217439	44	-	.	.
scaffold336	subtractBed	intrn	216939	217262	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_L2	216939	217262	168	-	.	.
scaffold336	subtractBed	intrn	217513	217590	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_CR1-L2	217513	217590	25	-	.	.
scaffold336	subtractBed	intrn	216227	216289	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_L2	216227	216289	29	-	.	.
scaffold336	subtractBed	intrn	216135	216251	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_RTE-X	216135	216251	49	-	.	.
scaffold336	subtractBed	intrn	216227	216301	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_L2	216227	216301	28	-	.	.
scaffold336	subtractBed	intrn	216807	217226	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_CR1	216807	217226	89	-	.	.
scaffold336	subtractBed	intrn	216933	217328	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_CR1	216933	217328	109	-	.	.
scaffold336	subtractBed	intrn	215683	216147	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_RTE-X	215683	216147	62	-	.	.
scaffold336	subtractBed	intrn	216424	216585	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_RTE-X	216424	216585	36	+	.	.
scaffold336	subtractBed	intrn	216305	216421	.	-	.	Parent=CGI_10012569;
	scaffold336	WUBlastX	LINE_RTE-X	216305	216421	27	+	.	.
scaffold336	subtractBed	intrn	232229	232328	.	+	.	Parent=CGI_10012571;
	scaffold336	TRF	Tandem_Repeat	232229	232328	87	+	.	.
scaffold336	subtractBed	intrn	259073	259123	.	-	.	Parent=CGI_10012572;
	scaffold336	TRF	Tandem_Repeat	259073	259123	102	+	.	.
scaffold336	subtractBed	intrn	259073	259123	.	+	.	Parent=CGI_10012573;
	scaffold336	TRF	Tandem_Repeat	259073	259123	102	+	.	.
scaffold336	subtractBed	intrn	287586	287660	.	-	.	Parent=CGI_10012575;
	scaffold336	TRF	Tandem_Repeat	287586	287660	150	+	.	.
scaffold336	subtractBed	intrn	287841	287925	.	-	.	Parent=CGI_10012575;
	scaffold336	TRF	Tandem_Repeat	287841	287925	152	+	.	.
scaffold336	subtractBed	intrn	301104	301137	.	-	.	Parent=CGI_10012578;
	scaffold336	TRF	Tandem_Repeat	301104	301137	68	+	.	.
scaffold336	subtractBed	intrn	318565	318603	.	-	.	Parent=CGI_10012580;
	scaffold336	TRF	Tandem_Repeat	318565	318603	78	+	.	.
scaffold336	subtractBed	intrn	318621	318660	.	-	.	Parent=CGI_10012580;
	scaffold336	TRF	Tandem_Repeat	318621	318660	80	+	.	.
scaffold337	subtractBed	intrn	32618	32749	.	-	.	Parent=CGI_10028049;
	scaffold337	TRF	Tandem_Repeat	32618	32749	250	+	.	.
scaffold337	subtractBed	intrn	38261	38356	.	-	.	Parent=CGI_10028049;
	scaffold337	WUBlastX	DNA_TcMar-Tc1	38261	38356	41	-	.	.
scaffold337	subtractBed	intrn	38353	38463	.	-	.	Parent=CGI_10028049;
	scaffold337	WUBlastX	DNA_TcMar-Tc1	38353	38463	61	-	.	.
scaffold337	subtractBed	intrn	51205	51273	.	-	.	Parent=CGI_10028049;
	scaffold337	TRF	Tandem_Repeat	51205	51273	111	+	.	.
scaffold337	subtractBed	intrn	57761	57810	.	-	.	Parent=CGI_10028049;
	scaffold337	TRF	Tandem_Repeat	57761	57810	73	+	.	.
scaffold337	subtractBed	intrn	270538	270598	.	-	.	Parent=CGI_10028051;
	scaffold337	TRF	Tandem_Repeat	270538	270598	59	+	.	.
scaffold337	subtractBed	intrn	293923	293978	.	+	.	Parent=CGI_10028052;
	scaffold337	TRF	Tandem_Repeat	293923	293978	112	+	.	.
scaffold337	subtractBed	intrn	301203	301236	.	+	.	Parent=CGI_10028052;
	scaffold337	TRF	Tandem_Repeat	301203	301236	68	+	.	.
scaffold337	subtractBed	intrn	314214	314404	.	-	.	Parent=CGI_10028053;
	scaffold337	TRF	Tandem_Repeat	314214	314404	129	+	.	.
scaffold337	subtractBed	intrn	315270	315323	.	-	.	Parent=CGI_10028053;
	scaffold337	TRF	Tandem_Repeat	315270	315323	65	+	.	.
scaffold337	subtractBed	intrn	398038	398118	.	-	.	Parent=CGI_10028058;
	scaffold337	TRF	Tandem_Repeat	398038	398118	112	+	.	.
scaffold337	subtractBed	intrn	400422	400459	.	-	.	Parent=CGI_10028058;
	scaffold337	TRF	Tandem_Repeat	400422	400459	67	+	.	.
scaffold337	subtractBed	intrn	403783	403828	.	-	.	Parent=CGI_10028058;
	scaffold337	TRF	Tandem_Repeat	403783	403828	92	+	.	.
scaffold337	subtractBed	intrn	431084	431117	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431084	431117	59	+	.	.
scaffold337	subtractBed	intrn	431188	431221	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431188	431221	68	+	.	.
scaffold337	subtractBed	intrn	431082	431515	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431082	431515	726	+	.	.
scaffold337	subtractBed	intrn	431292	431323	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431292	431323	64	+	.	.
scaffold337	subtractBed	intrn	431086	431515	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431086	431515	728	+	.	.
scaffold337	subtractBed	intrn	431490	431515	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	431490	431515	52	+	.	.
scaffold337	subtractBed	intrn	433707	434661	.	+	.	Parent=CGI_10028063;
	scaffold337	TRF	Tandem_Repeat	433707	434661	986	+	.	.
scaffold337	subtractBed	intrn	445848	445919	.	+	.	Parent=CGI_10028064;
	scaffold337	TRF	Tandem_Repeat	445848	445919	144	+	.	.
scaffold337	subtractBed	intrn	449499	449851	.	-	.	Parent=CGI_10028066;
	scaffold337	TRF	Tandem_Repeat	449499	449851	502	+	.	.
scaffold337	subtractBed	intrn	450932	450987	.	-	.	Parent=CGI_10028066;
	scaffold337	TRF	Tandem_Repeat	450932	450987	112	+	.	.
scaffold337	subtractBed	intrn	465209	465280	.	-	.	Parent=CGI_10028066;
	scaffold337	TRF	Tandem_Repeat	465209	465280	144	+	.	.
scaffold337	subtractBed	intrn	469914	469948	.	-	.	Parent=CGI_10028066;
	scaffold337	TRF	Tandem_Repeat	469914	469948	61	+	.	.
scaffold337	subtractBed	intrn	490375	490878	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	490375	490878	46	-	.	.
scaffold337	subtractBed	intrn	489176	489748	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	489176	489748	161	-	.	.
scaffold337	subtractBed	intrn	490136	490378	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	490136	490378	146	-	.	.
scaffold337	subtractBed	intrn	489218	490069	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	489218	490069	150	-	.	.
scaffold337	subtractBed	intrn	489977	490360	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	489977	490360	115	-	.	.
scaffold337	subtractBed	intrn	490375	490767	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	490375	490767	91	-	.	.
scaffold337	subtractBed	intrn	490375	490632	.	+	.	Parent=CGI_10028067;
	scaffold337	WUBlastX	LTR_Gypsy	490375	490632	151	-	.	.
scaffold337	subtractBed	intrn	498062	498097	.	+	.	Parent=CGI_10028067;
	scaffold337	TRF	Tandem_Repeat	498062	498097	72	+	.	.
scaffold337	subtractBed	intrn	505351	505382	.	+	.	Parent=CGI_10028067;
	scaffold337	TRF	Tandem_Repeat	505351	505382	64	+	.	.
scaffold337	subtractBed	intrn	535440	535485	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	535440	535485	65	+	.	.
scaffold337	subtractBed	intrn	537221	537697	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	537221	537697	746	+	.	.
scaffold337	subtractBed	intrn	537329	537433	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	537329	537433	57	+	.	.
scaffold337	subtractBed	intrn	538122	538350	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	538122	538350	305	+	.	.
scaffold337	subtractBed	intrn	539971	540056	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	539971	540056	109	+	.	.
scaffold337	subtractBed	intrn	541572	541725	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	541572	541725	272	+	.	.
scaffold337	subtractBed	intrn	540070	541038	.	+	.	Parent=CGI_10028069;
	scaffold337	TRF	Tandem_Repeat	540070	541038	1697	+	.	.
scaffold337	subtractBed	intrn	564925	564968	.	-	.	Parent=CGI_10028070;
	scaffold337	TRF	Tandem_Repeat	564925	564968	61	+	.	.
scaffold337	subtractBed	intrn	567181	567228	.	-	.	Parent=CGI_10028070;
	scaffold337	TRF	Tandem_Repeat	567181	567228	96	+	.	.
scaffold337	subtractBed	intrn	567314	567373	.	-	.	Parent=CGI_10028070;
	scaffold337	TRF	Tandem_Repeat	567314	567373	120	+	.	.
scaffold337	subtractBed	intrn	570423	570971	.	-	.	Parent=CGI_10028070;
	scaffold337	WUBlastX	LINE_RTE-BovB	570423	570971	102	+	.	.
scaffold337	subtractBed	intrn	570716	571057	.	-	.	Parent=CGI_10028070;
	scaffold337	WUBlastX	LINE_RTE-BovB	570716	571057	64	+	.	.
scaffold337	subtractBed	intrn	570106	570582	.	-	.	Parent=CGI_10028070;
	scaffold337	WUBlastX	LINE_RTE-BovB	570106	570582	28	+	.	.
scaffold337	subtractBed	intrn	570716	571153	.	-	.	Parent=CGI_10028070;
	scaffold337	WUBlastX	LINE_RTE-BovB	570716	571153	42	+	.	.
scaffold337	subtractBed	intrn	576971	577025	.	-	.	Parent=CGI_10028070;
	scaffold337	TRF	Tandem_Repeat	576971	577025	110	+	.	.
scaffold337	subtractBed	intrn	598525	598807	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	598525	598807	449	+	.	.
scaffold337	subtractBed	intrn	599970	600222	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	599970	600222	183	+	.	.
scaffold337	subtractBed	intrn	599964	600223	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	599964	600223	376	+	.	.
scaffold337	subtractBed	intrn	602661	602785	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	602661	602785	223	+	.	.
scaffold337	subtractBed	intrn	616245	616320	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	616245	616320	73	+	.	.
scaffold337	subtractBed	intrn	618055	618098	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	618055	618098	54	+	.	.
scaffold337	subtractBed	intrn	621923	622258	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	621923	622272	510	+	.	.
scaffold337	subtractBed	intrn	624173	624326	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	624173	624326	74	+	.	.
scaffold337	subtractBed	intrn	624413	624438	.	-	.	Parent=CGI_10028071;
	scaffold337	TRF	Tandem_Repeat	624413	624438	52	+	.	.
scaffold337	subtractBed	intrn	618055	618098	.	+	.	Parent=CGI_10028072;
	scaffold337	TRF	Tandem_Repeat	618055	618098	54	+	.	.
scaffold337	subtractBed	intrn	653552	653577	.	-	.	Parent=CGI_10028074;
	scaffold337	TRF	Tandem_Repeat	653552	653577	52	+	.	.
scaffold337	subtractBed	intrn	662497	662853	.	-	.	Parent=CGI_10028075;
	scaffold337	TRF	Tandem_Repeat	662497	662853	300	+	.	.
scaffold337	subtractBed	intrn	713585	713615	.	-	.	Parent=CGI_10028076;
	scaffold337	TRF	Tandem_Repeat	713585	713615	62	+	.	.
scaffold337	subtractBed	intrn	764982	765010	.	-	.	Parent=CGI_10028082;
	scaffold337	TRF	Tandem_Repeat	764982	765010	51	+	.	.
scaffold337	subtractBed	intrn	769569	769599	.	-	.	Parent=CGI_10028082;
	scaffold337	TRF	Tandem_Repeat	769569	769599	62	+	.	.
scaffold337	subtractBed	intrn	769810	769862	.	-	.	Parent=CGI_10028082;
	scaffold337	TRF	Tandem_Repeat	769810	769862	99	+	.	.
scaffold337	subtractBed	intrn	764982	765010	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	764982	765010	51	+	.	.
scaffold337	subtractBed	intrn	769569	769599	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	769569	769599	62	+	.	.
scaffold337	subtractBed	intrn	769810	769862	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	769810	769862	99	+	.	.
scaffold337	subtractBed	intrn	781016	781053	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	781016	781053	67	+	.	.
scaffold337	subtractBed	intrn	781051	781075	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	781051	781075	50	+	.	.
scaffold337	subtractBed	intrn	785915	785962	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	785915	785962	51	+	.	.
scaffold337	subtractBed	intrn	786298	786357	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	786298	786357	111	+	.	.
scaffold337	subtractBed	intrn	788147	788182	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	788147	788182	63	+	.	.
scaffold337	subtractBed	intrn	788358	788416	.	+	.	Parent=CGI_10028083;
	scaffold337	TRF	Tandem_Repeat	788358	788416	109	+	.	.
scaffold337	subtractBed	intrn	807353	807453	.	-	.	Parent=CGI_10028084;
	scaffold337	TRF	Tandem_Repeat	807353	807453	100	+	.	.
scaffold337	subtractBed	intrn	807353	807453	.	-	.	Parent=CGI_10028084;
	scaffold337	TRF	Tandem_Repeat	807353	807453	100	+	.	.
scaffold337	subtractBed	intrn	829129	829177	.	+	.	Parent=CGI_10028085;
	scaffold337	TRF	Tandem_Repeat	829129	829177	89	+	.	.
scaffold337	subtractBed	intrn	915075	915239	.	-	.	Parent=CGI_10028087;
	scaffold337	WUBlastX	RC_Helitron	915075	915239	46	-	.	.
scaffold337	subtractBed	intrn	915301	916155	.	-	.	Parent=CGI_10028087;
	scaffold337	WUBlastX	RC_Helitron	915301	916155	604	-	.	.
scaffold337	subtractBed	intrn	915111	915239	.	-	.	Parent=CGI_10028087;
	scaffold337	WUBlastX	RC_Helitron	915111	915239	76	-	.	.
scaffold337	subtractBed	intrn	916100	916213	.	-	.	Parent=CGI_10028087;
	scaffold337	WUBlastX	RC_Helitron	916100	916213	138	-	.	.
scaffold337	subtractBed	intrn	915114	915299	.	-	.	Parent=CGI_10028087;
	scaffold337	WUBlastX	DNA_Helitron	915114	915299	74	-	.	.
scaffold337	subtractBed	intrn	919941	919974	.	-	.	Parent=CGI_10028087;
	scaffold337	TRF	Tandem_Repeat	919941	919974	50	+	.	.
scaffold337	subtractBed	intrn	920168	920255	.	-	.	Parent=CGI_10028087;
	scaffold337	TRF	Tandem_Repeat	920168	920255	126	+	.	.
scaffold337	subtractBed	intrn	1020383	1020434	.	+	.	Parent=CGI_10028089;
	scaffold337	TRF	Tandem_Repeat	1020383	1020434	104	+	.	.
scaffold337	subtractBed	intrn	1060094	1060166	.	+	.	Parent=CGI_10028091;
	scaffold337	TRF	Tandem_Repeat	1060094	1060166	146	+	.	.
scaffold337	subtractBed	intrn	1068100	1068145	.	+	.	Parent=CGI_10028091;
	scaffold337	TRF	Tandem_Repeat	1068100	1068145	92	+	.	.
scaffold337	subtractBed	intrn	1075359	1075427	.	+	.	Parent=CGI_10028091;
	scaffold337	TRF	Tandem_Repeat	1075359	1075427	129	+	.	.
scaffold337	subtractBed	intrn	1077678	1077782	.	+	.	Parent=CGI_10028091;
	scaffold337	TRF	Tandem_Repeat	1077678	1077782	158	+	.	.
scaffold337	subtractBed	intrn	1079550	1079600	.	+	.	Parent=CGI_10028091;
	scaffold337	TRF	Tandem_Repeat	1079550	1079600	102	+	.	.
scaffold337	subtractBed	intrn	1078524	1078856	.	+	.	Parent=CGI_10028091;
	scaffold337	WUBlastX	LINE_L1	1078524	1078856	85	+	.	.
scaffold337	subtractBed	intrn	1080399	1080827	.	+	.	Parent=CGI_10028091;
	scaffold337	WUBlastX	LINE_L1-Tx1	1080399	1080827	84	+	.	.
scaffold337	subtractBed	intrn	1078581	1078859	.	+	.	Parent=CGI_10028091;
	scaffold337	WUBlastX	LINE_L1-Tx1	1078581	1078859	148	+	.	.
scaffold337	subtractBed	intrn	1082959	1082977	.	+	.	Parent=CGI_10028091;
	scaffold337	WUBlastX	LINE_L1-Tx1	1082959	1083969	41	+	.	.
scaffold337	subtractBed	intrn	1080474	1082891	.	+	.	Parent=CGI_10028091;
	scaffold337	WUBlastX	LINE_L1-Tx1	1080474	1082891	770	+	.	.
scaffold337	subtractBed	intrn	1200544	1200602	.	-	.	Parent=CGI_10028098;
	scaffold337	TRF	Tandem_Repeat	1200544	1200602	118	+	.	.
scaffold337	subtractBed	intrn	1270567	1270606	.	-	.	Parent=CGI_10028103;
	scaffold337	TRF	Tandem_Repeat	1270567	1270606	80	+	.	.
scaffold337	subtractBed	intrn	1295533	1296049	.	+	.	Parent=CGI_10028104;
	scaffold337	TRF	Tandem_Repeat	1295533	1296049	800	+	.	.
scaffold337	subtractBed	intrn	1296202	1296245	.	+	.	Parent=CGI_10028104;
	scaffold337	TRF	Tandem_Repeat	1296202	1296245	88	+	.	.
scaffold337	subtractBed	intrn	1393496	1393576	.	+	.	Parent=CGI_10028111;
	scaffold337	TRF	Tandem_Repeat	1393496	1393576	135	+	.	.
scaffold337	subtractBed	intrn	1393500	1393658	.	+	.	Parent=CGI_10028111;
	scaffold337	TRF	Tandem_Repeat	1393500	1393658	105	+	.	.
scaffold337	subtractBed	intrn	1393496	1393670	.	+	.	Parent=CGI_10028111;
	scaffold337	TRF	Tandem_Repeat	1393496	1393670	126	+	.	.
scaffold337	subtractBed	intrn	1443907	1443937	.	-	.	Parent=CGI_10028114;
	scaffold337	TRF	Tandem_Repeat	1443907	1443937	62	+	.	.
scaffold337	subtractBed	intrn	1446248	1446301	.	-	.	Parent=CGI_10028114;
	scaffold337	TRF	Tandem_Repeat	1446248	1446301	108	+	.	.
scaffold337	subtractBed	intrn	1484005	1484382	.	-	.	Parent=CGI_10028119;
	scaffold337	WUBlastX	LTR_Pao	1484005	1484427	92	+	.	.
scaffold337	subtractBed	intrn	1486998	1487022	.	-	.	Parent=CGI_10028119;
	scaffold337	TRF	Tandem_Repeat	1486998	1487022	50	+	.	.
scaffold337	subtractBed	intrn	1484005	1484382	.	+	.	Parent=CGI_10028120;
	scaffold337	WUBlastX	LTR_Pao	1484005	1484427	92	+	.	.
scaffold337	subtractBed	intrn	1497907	1497959	.	-	.	Parent=CGI_10028121;
	scaffold337	TRF	Tandem_Repeat	1497907	1497959	106	+	.	.
scaffold337	subtractBed	intrn	1528039	1528234	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1528039	1528234	293	+	.	.
scaffold337	subtractBed	intrn	1534096	1534725	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1534096	1534725	761	+	.	.
scaffold337	subtractBed	intrn	1534730	1534780	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1534730	1534780	57	+	.	.
scaffold337	subtractBed	intrn	1534730	1534767	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1534730	1534767	58	+	.	.
scaffold337	subtractBed	intrn	1537753	1538370	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1537753	1538370	1128	+	.	.
scaffold337	subtractBed	intrn	1537753	1538677	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1537753	1538677	1608	+	.	.
scaffold337	subtractBed	intrn	1538369	1538677	.	-	.	Parent=CGI_10028125;
	scaffold337	TRF	Tandem_Repeat	1538369	1538677	575	+	.	.
scaffold33704	subtractBed	intrn	10483	10508	.	+	.	Parent=CGI_10001119;
	scaffold33704	WUBlastX	LTR_DIRS	9783	10508	579	+	.	.
scaffold33704	subtractBed	intrn	10507	10642	.	+	.	Parent=CGI_10001119;
	scaffold33704	WUBlastX	LTR_DIRS	10507	10806	236	+	.	.
scaffold33724	subtractBed	intrn	13745	13903	.	+	.	Parent=CGI_10001124;
	scaffold33724	WUBlastX	DNA_Harbinger	13745	13903	66	+	.	.
scaffold338	subtractBed	intrn	51290	51320	.	+	.	Parent=CGI_10011184;
	scaffold338	TRF	Tandem_Repeat	51290	51320	53	+	.	.
scaffold338	subtractBed	intrn	50657	51028	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_CR1-L2	50657	51028	83	-	.	.
scaffold338	subtractBed	intrn	51525	51881	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_L2	51525	51881	88	-	.	.
scaffold338	subtractBed	intrn	51845	52501	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_L2	51845	52501	375	-	.	.
scaffold338	subtractBed	intrn	52519	52773	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_L2	52519	52773	84	-	.	.
scaffold338	subtractBed	intrn	52489	52533	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_CR1	52489	52533	24	-	.	.
scaffold338	subtractBed	intrn	51028	51108	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_CR1-L2	51028	51108	62	-	.	.
scaffold338	subtractBed	intrn	50585	51085	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_L2	50585	51085	65	-	.	.
scaffold338	subtractBed	intrn	51111	51200	.	+	.	Parent=CGI_10011184;
	scaffold338	WUBlastX	LINE_L2	51111	51200	21	-	.	.
scaffold338	subtractBed	intrn	54387	54461	.	+	.	Parent=CGI_10011184;
	scaffold338	TRF	Tandem_Repeat	54387	54461	53	+	.	.
scaffold338	subtractBed	intrn	54415	54469	.	+	.	Parent=CGI_10011184;
	scaffold338	TRF	Tandem_Repeat	54415	54469	110	+	.	.
scaffold338	subtractBed	intrn	206155	206633	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	206155	206633	379	+	.	.
scaffold338	subtractBed	intrn	206239	206630	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	206239	206630	385	+	.	.
scaffold338	subtractBed	intrn	207504	207807	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	207504	207807	216	+	.	.
scaffold338	subtractBed	intrn	207456	207804	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	207456	207804	148	+	.	.
scaffold338	subtractBed	intrn	207464	207807	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	207464	207807	545	+	.	.
scaffold338	subtractBed	intrn	208407	208447	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	208407	208447	82	+	.	.
scaffold338	subtractBed	intrn	208708	208790	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	208708	208790	139	+	.	.
scaffold338	subtractBed	intrn	208858	208908	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	208858	208908	102	+	.	.
scaffold338	subtractBed	intrn	211838	211867	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	211838	211867	53	+	.	.
scaffold338	subtractBed	intrn	213173	213225	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	213173	213225	106	+	.	.
scaffold338	subtractBed	intrn	213226	213307	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	213226	213307	51	+	.	.
scaffold338	subtractBed	intrn	213239	213314	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	213239	213314	68	+	.	.
scaffold338	subtractBed	intrn	213227	213345	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	213227	213345	62	+	.	.
scaffold338	subtractBed	intrn	213238	213344	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	213238	213344	71	+	.	.
scaffold338	subtractBed	intrn	215329	215514	.	+	.	Parent=CGI_10011187;
	scaffold338	TRF	Tandem_Repeat	215329	215514	126	+	.	.
scaffold338	subtractBed	intrn	226868	228618	.	+	.	Parent=CGI_10011188;
	scaffold338	TRF	Tandem_Repeat	226868	228618	2336	+	.	.
scaffold338	subtractBed	intrn	226235	226450	.	+	.	Parent=CGI_10011188;
	scaffold338	WUBlastX	LINE_RTE-X	226235	226450	52	-	.	.
scaffold338	subtractBed	intrn	226334	226462	.	+	.	Parent=CGI_10011188;
	scaffold338	WUBlastX	LINE_RTE-X	226334	226462	65	-	.	.
scaffold338	subtractBed	intrn	226313	226465	.	+	.	Parent=CGI_10011188;
	scaffold338	WUBlastX	LINE_RTE-X	226313	226465	56	-	.	.
scaffold338	subtractBed	intrn	237721	237787	.	+	.	Parent=CGI_10011188;
	scaffold338	TRF	Tandem_Repeat	237721	237787	89	+	.	.
scaffold338	subtractBed	intrn	243001	243042	.	+	.	Parent=CGI_10011188;
	scaffold338	TRF	Tandem_Repeat	243001	243042	75	+	.	.
scaffold338	subtractBed	intrn	246005	246038	.	+	.	Parent=CGI_10011188;
	scaffold338	TRF	Tandem_Repeat	246005	246038	68	+	.	.
scaffold338	subtractBed	intrn	247749	247984	.	+	.	Parent=CGI_10011188;
	scaffold338	TRF	Tandem_Repeat	247749	247984	210	+	.	.
scaffold33832	subtractBed	intrn	14875	14925	.	+	.	Parent=CGI_10001155;
	scaffold33832	TRF	Tandem_Repeat	14875	14925	68	+	.	.
scaffold33832	subtractBed	intrn	15098	15203	.	+	.	Parent=CGI_10001155;
	scaffold33832	TRF	Tandem_Repeat	15098	15203	128	+	.	.
scaffold339	subtractBed	intrn	50997	51032	.	-	.	Parent=CGI_10008798;
	scaffold339	TRF	Tandem_Repeat	50997	51032	72	+	.	.
scaffold339	subtractBed	intrn	83722	83908	.	-	.	Parent=CGI_10008800;
	scaffold339	TRF	Tandem_Repeat	83722	83908	169	+	.	.
scaffold339	subtractBed	intrn	83712	83931	.	-	.	Parent=CGI_10008800;
	scaffold339	TRF	Tandem_Repeat	83712	83931	298	+	.	.
scaffold339	subtractBed	intrn	86775	87744	.	-	.	Parent=CGI_10008800;
	scaffold339	TRF	Tandem_Repeat	86775	87744	1645	+	.	.
scaffold339	subtractBed	intrn	88458	88504	.	-	.	Parent=CGI_10008800;
	scaffold339	TRF	Tandem_Repeat	88458	88504	78	+	.	.
scaffold339	subtractBed	intrn	97478	97521	.	+	.	Parent=CGI_10008801;
	scaffold339	TRF	Tandem_Repeat	97478	97521	88	+	.	.
scaffold339	subtractBed	intrn	150425	151437	.	+	.	Parent=CGI_10008803;
	scaffold339	TRF	Tandem_Repeat	150425	151437	1256	+	.	.
scaffold339	subtractBed	intrn	151775	152432	.	+	.	Parent=CGI_10008803;
	scaffold339	TRF	Tandem_Repeat	151775	152432	838	+	.	.
scaffold339	subtractBed	intrn	151775	152432	.	+	.	Parent=CGI_10008803;
	scaffold339	TRF	Tandem_Repeat	151775	152432	840	+	.	.
scaffold339	subtractBed	intrn	152739	153574	.	+	.	Parent=CGI_10008803;
	scaffold339	TRF	Tandem_Repeat	152739	153574	1169	+	.	.
scaffold339	subtractBed	intrn	155957	156292	.	+	.	Parent=CGI_10008803;
	scaffold339	WUBlastX	LINE_RTE-X	155957	156292	48	-	.	.
scaffold339	subtractBed	intrn	155737	155889	.	+	.	Parent=CGI_10008803;
	scaffold339	WUBlastX	LINE_RTE-X	155737	155889	50	-	.	.
scaffold33980	subtractBed	intrn	2800	3525	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	DNA_hAT-Tip100	2800	3525	20	+	.	.
scaffold33980	subtractBed	intrn	2800	2979	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	DNA_hAT-Tip100	2800	2979	47	+	.	.
scaffold33980	subtractBed	intrn	3883	4992	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	DNA_hAT-Tip100	3883	4992	242	+	.	.
scaffold33980	subtractBed	intrn	3187	3531	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	DNA_hAT-Tip100	3187	3531	172	+	.	.
scaffold33980	subtractBed	intrn	3548	3910	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	DNA_hAT-Tip100	3548	3910	94	+	.	.
scaffold33980	subtractBed	intrn	10702	11067	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	LTR_Ngaro	10702	11067	257	-	.	.
scaffold33980	subtractBed	intrn	9782	10102	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	LTR_Gypsy	9782	10102	27	-	.	.
scaffold33980	subtractBed	intrn	9421	9690	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	LTR_Ngaro	9421	9690	108	-	.	.
scaffold33980	subtractBed	intrn	9845	10714	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	LTR_Ngaro	9845	10714	314	-	.	.
scaffold33980	subtractBed	intrn	7101	7244	.	+	.	Parent=CGI_10001168;
	scaffold33980	WUBlastX	RC_Helitron	7101	7244	44	+	.	.
scaffold34	subtractBed	intrn	16153	16198	.	+	.	Parent=CGI_10015925;
	scaffold34	TRF	Tandem_Repeat	16153	16198	76	+	.	.
scaffold34	subtractBed	intrn	16148	16201	.	+	.	Parent=CGI_10015925;
	scaffold34	TRF	Tandem_Repeat	16148	16201	76	+	.	.
scaffold34	subtractBed	intrn	16371	17115	.	+	.	Parent=CGI_10015925;
	scaffold34	TRF	Tandem_Repeat	16371	17115	1249	+	.	.
scaffold34	subtractBed	intrn	16368	17207	.	+	.	Parent=CGI_10015925;
	scaffold34	TRF	Tandem_Repeat	16368	17207	1247	+	.	.
scaffold34	subtractBed	intrn	34804	34860	.	-	.	Parent=CGI_10015926;
	scaffold34	TRF	Tandem_Repeat	34804	34860	114	+	.	.
scaffold34	subtractBed	intrn	81224	81278	.	+	.	Parent=CGI_10015928;
	scaffold34	TRF	Tandem_Repeat	81224	81278	60	+	.	.
scaffold34	subtractBed	intrn	81224	81278	.	+	.	Parent=CGI_10015928;
	scaffold34	TRF	Tandem_Repeat	81224	81278	71	+	.	.
scaffold34	subtractBed	intrn	84900	84917	.	+	.	Parent=CGI_10015928;
	scaffold34	WUBlastX	LINE_L1	84588	84917	23	-	.	.
scaffold34	subtractBed	intrn	92377	92433	.	+	.	Parent=CGI_10015930;
	scaffold34	TRF	Tandem_Repeat	92377	92433	114	+	.	.
scaffold34	subtractBed	intrn	106523	106729	.	+	.	Parent=CGI_10015930;
	scaffold34	WUBlastX	LINE_L2	106523	106729	44	-	.	.
scaffold34	subtractBed	intrn	270795	270854	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	270795	270854	57	+	.	.
scaffold34	subtractBed	intrn	270795	270843	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	270795	270843	89	+	.	.
scaffold34	subtractBed	intrn	270797	270854	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	270797	270854	80	+	.	.
scaffold34	subtractBed	intrn	272977	274144	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	272977	274144	1425	+	.	.
scaffold34	subtractBed	intrn	272977	275430	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	272977	275430	1449	+	.	.
scaffold34	subtractBed	intrn	273740	276140	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	273740	276140	1131	+	.	.
scaffold34	subtractBed	intrn	276290	276373	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	276290	276373	50	+	.	.
scaffold34	subtractBed	intrn	276350	276441	.	+	.	Parent=CGI_10015942;
	scaffold34	TRF	Tandem_Repeat	276350	276441	53	+	.	.
scaffold34	subtractBed	intrn	290758	291523	.	-	.	Parent=CGI_10015943;
	scaffold34	WUBlastX	DNA_IS4EU	290723	291523	400	-	.	.
scaffold34	subtractBed	intrn	292455	292750	.	-	.	Parent=CGI_10015943;
	scaffold34	WUBlastX	DNA_IS4EU	292455	292814	62	-	.	.
scaffold34	subtractBed	intrn	368252	368388	.	+	.	Parent=CGI_10015945;
	scaffold34	TRF	Tandem_Repeat	368252	368388	204	+	.	.
scaffold340	subtractBed	intrn	1441	1486	.	-	.	Parent=CGI_10011093;
	scaffold340	TRF	Tandem_Repeat	1441	1486	92	+	.	.
scaffold340	subtractBed	intrn	11734	11773	.	-	.	Parent=CGI_10011093;
	scaffold340	TRF	Tandem_Repeat	11734	11773	80	+	.	.
scaffold340	subtractBed	intrn	40195	40238	.	-	.	Parent=CGI_10011095;
	scaffold340	TRF	Tandem_Repeat	40195	40238	72	+	.	.
scaffold340	subtractBed	intrn	51357	51396	.	-	.	Parent=CGI_10011095;
	scaffold340	TRF	Tandem_Repeat	51357	51396	80	+	.	.
scaffold340	subtractBed	intrn	55632	55918	.	-	.	Parent=CGI_10011096;
	scaffold340	TRF	Tandem_Repeat	55632	55918	231	+	.	.
scaffold340	subtractBed	intrn	79436	79472	.	+	.	Parent=CGI_10011097;
	scaffold340	TRF	Tandem_Repeat	79436	79472	65	+	.	.
scaffold340	subtractBed	intrn	166665	167476	.	+	.	Parent=CGI_10011101;
	scaffold340	TRF	Tandem_Repeat	166665	167476	1270	+	.	.
scaffold340	subtractBed	intrn	181779	181830	.	+	.	Parent=CGI_10011102;
	scaffold340	TRF	Tandem_Repeat	181779	181830	104	+	.	.
scaffold340	subtractBed	intrn	218538	219605	.	-	.	Parent=CGI_10011108;
	scaffold340	WUBlastX	DNA_IS4EU	218538	219605	307	+	.	.
scaffold340	subtractBed	intrn	230588	230673	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	230588	230673	91	+	.	.
scaffold340	subtractBed	intrn	230739	230959	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	230739	230959	173	+	.	.
scaffold340	subtractBed	intrn	230739	230931	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	230739	230931	237	+	.	.
scaffold340	subtractBed	intrn	230739	230958	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	230739	230958	219	+	.	.
scaffold340	subtractBed	intrn	230958	231094	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	230958	231094	125	+	.	.
scaffold340	subtractBed	intrn	233275	233311	.	-	.	Parent=CGI_10011109;
	scaffold340	TRF	Tandem_Repeat	233275	233311	74	+	.	.
scaffold340	subtractBed	intrn	253968	254633	.	+	.	Parent=CGI_10011112;
	scaffold340	TRF	Tandem_Repeat	253968	254633	926	+	.	.
scaffold340	subtractBed	intrn	256742	256818	.	+	.	Parent=CGI_10011112;
	scaffold340	TRF	Tandem_Repeat	256742	256818	136	+	.	.
scaffold34016	subtractBed	intrn	4156	4187	.	-	.	Parent=CGI_10001181;
	scaffold34016	TRF	Tandem_Repeat	4156	4187	64	+	.	.
scaffold34016	subtractBed	intrn	3285	3821	.	-	.	Parent=CGI_10001181;
	scaffold34016	WUBlastX	LINE_Penelope	3285	3821	100	+	.	.
scaffold34016	subtractBed	intrn	3294	3695	.	-	.	Parent=CGI_10001181;
	scaffold34016	WUBlastX	LINE_Penelope	3294	3695	117	+	.	.
scaffold34106	subtractBed	intrn	13222	14289	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	13222	14289	418	+	.	.
scaffold34106	subtractBed	intrn	11015	11173	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	11015	11173	38	+	.	.
scaffold34106	subtractBed	intrn	11323	11448	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	11323	11448	29	+	.	.
scaffold34106	subtractBed	intrn	12454	12867	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	12454	12867	198	+	.	.
scaffold34106	subtractBed	intrn	11729	12319	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	11729	12319	420	+	.	.
scaffold34106	subtractBed	intrn	12869	13531	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	12869	13531	412	+	.	.
scaffold34106	subtractBed	intrn	13417	14337	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	13417	14337	485	+	.	.
scaffold34106	subtractBed	intrn	11290	11325	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_Gypsy	11290	11325	29	+	.	.
scaffold34106	subtractBed	intrn	12219	12440	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_DIRS	12219	12440	157	+	.	.
scaffold34106	subtractBed	intrn	11648	12115	.	-	.	Parent=CGI_10001211;
	scaffold34106	WUBlastX	LTR_Gypsy	11648	12115	71	+	.	.
scaffold34202	subtractBed	intrn	9773	9949	.	-	.	Parent=CGI_10001227;
	scaffold34202	WUBlastX	LINE_RTE-X	9773	9949	49	+	.	.
scaffold34202	subtractBed	intrn	9785	9916	.	-	.	Parent=CGI_10001227;
	scaffold34202	WUBlastX	LINE_RTE-X	9785	9916	55	+	.	.
scaffold34244	subtractBed	intrn	2083	2788	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	1885	2788	1069	+	.	.
scaffold34244	subtractBed	intrn	3917	4182	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	3917	4182	363	+	.	.
scaffold34244	subtractBed	intrn	8058	8444	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	8058	8444	460	+	.	.
scaffold34244	subtractBed	intrn	10309	10349	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	10309	10349	55	+	.	.
scaffold34244	subtractBed	intrn	10312	10356	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	10312	10356	72	+	.	.
scaffold34244	subtractBed	intrn	15632	15718	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	15632	15718	50	+	.	.
scaffold34244	subtractBed	intrn	15632	15718	.	-	.	Parent=CGI_10001253;
	scaffold34244	TRF	Tandem_Repeat	15632	15718	57	+	.	.
scaffold34282	subtractBed	intrn	4344	4403	.	-	.	Parent=CGI_10001256;
	scaffold34282	TRF	Tandem_Repeat	4344	4403	99	+	.	.
scaffold34282	subtractBed	intrn	9506	9572	.	-	.	Parent=CGI_10001256;
	scaffold34282	TRF	Tandem_Repeat	9506	9572	82	+	.	.
scaffold34282	subtractBed	intrn	10157	10206	.	-	.	Parent=CGI_10001256;
	scaffold34282	TRF	Tandem_Repeat	10157	10206	64	+	.	.
scaffold34282	subtractBed	intrn	14267	14347	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_Rex-Babar	14267	14347	21	-	.	.
scaffold34282	subtractBed	intrn	8283	8987	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_RTE-X	8283	8987	333	-	.	.
scaffold34282	subtractBed	intrn	8999	9484	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_RTE-X	8999	9484	314	-	.	.
scaffold34282	subtractBed	intrn	14291	14380	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_L2	14291	14380	22	-	.	.
scaffold34282	subtractBed	intrn	7973	8038	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_L1	7973	8038	23	-	.	.
scaffold34282	subtractBed	intrn	8005	8271	.	-	.	Parent=CGI_10001256;
	scaffold34282	WUBlastX	LINE_RTE-X	8005	8271	130	-	.	.
scaffold343	subtractBed	intrn	274248	274295	.	-	.	Parent=CGI_10021745;
	scaffold343	TRF	Tandem_Repeat	274248	274295	60	+	.	.
scaffold343	subtractBed	intrn	274251	274295	.	-	.	Parent=CGI_10021745;
	scaffold343	TRF	Tandem_Repeat	274251	274295	81	+	.	.
scaffold343	subtractBed	intrn	283666	283913	.	-	.	Parent=CGI_10021745;
	scaffold343	TRF	Tandem_Repeat	283666	283913	397	+	.	.
scaffold343	subtractBed	intrn	477919	477957	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	477919	477957	78	+	.	.
scaffold343	subtractBed	intrn	482506	482622	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	482506	482622	116	+	.	.
scaffold343	subtractBed	intrn	482506	482651	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	482506	482651	119	+	.	.
scaffold343	subtractBed	intrn	484643	485351	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	484643	485351	661	+	.	.
scaffold343	subtractBed	intrn	484643	485348	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	484643	485348	840	+	.	.
scaffold343	subtractBed	intrn	487427	487464	.	-	.	Parent=CGI_10021759;
	scaffold343	TRF	Tandem_Repeat	487427	487464	76	+	.	.
scaffold343	subtractBed	intrn	508703	509714	.	+	.	Parent=CGI_10021760;
	scaffold343	TRF	Tandem_Repeat	508703	509714	1542	+	.	.
scaffold343	subtractBed	intrn	508703	509750	.	+	.	Parent=CGI_10021760;
	scaffold343	TRF	Tandem_Repeat	508703	509750	1553	+	.	.
scaffold343	subtractBed	intrn	520442	520486	.	-	.	Parent=CGI_10021761;
	scaffold343	TRF	Tandem_Repeat	520442	520486	90	+	.	.
scaffold343	subtractBed	intrn	522471	522513	.	-	.	Parent=CGI_10021761;
	scaffold343	TRF	Tandem_Repeat	522471	522513	86	+	.	.
scaffold343	subtractBed	intrn	543874	543950	.	-	.	Parent=CGI_10021763;
	scaffold343	TRF	Tandem_Repeat	543874	543950	56	+	.	.
scaffold343	subtractBed	intrn	543879	543927	.	-	.	Parent=CGI_10021763;
	scaffold343	TRF	Tandem_Repeat	543879	543927	50	+	.	.
scaffold343	subtractBed	intrn	608523	608551	.	+	.	Parent=CGI_10021767;
	scaffold343	TRF	Tandem_Repeat	608523	608551	58	+	.	.
scaffold343	subtractBed	intrn	611056	611092	.	+	.	Parent=CGI_10021767;
	scaffold343	TRF	Tandem_Repeat	611056	611092	74	+	.	.
scaffold343	subtractBed	intrn	615196	615486	.	+	.	Parent=CGI_10021767;
	scaffold343	WUBlastX	RC_Helitron	615196	615486	39	-	.	.
scaffold343	subtractBed	intrn	612639	613220	.	+	.	Parent=CGI_10021767;
	scaffold343	WUBlastX	RC_Helitron	612639	613220	115	-	.	.
scaffold343	subtractBed	intrn	614260	615435	.	+	.	Parent=CGI_10021767;
	scaffold343	WUBlastX	DNA_Helitron	614260	615435	442	-	.	.
scaffold343	subtractBed	intrn	612651	613325	.	+	.	Parent=CGI_10021767;
	scaffold343	WUBlastX	LINE_L2	612651	613325	63	-	.	.
scaffold343	subtractBed	intrn	619366	621462	.	-	.	Parent=CGI_10021768;
	scaffold343	WUBlastX	DNA_Zator	619366	621462	1225	+	.	.
scaffold343	subtractBed	intrn	624044	624325	.	-	.	Parent=CGI_10021768;
	scaffold343	WUBlastX	DNA_Kolobok	624044	624325	111	-	.	.
scaffold343	subtractBed	intrn	624008	624271	.	-	.	Parent=CGI_10021768;
	scaffold343	WUBlastX	DNA_Kolobok	624008	624271	141	-	.	.
scaffold343	subtractBed	intrn	632195	632328	.	-	.	Parent=CGI_10021768;
	scaffold343	TRF	Tandem_Repeat	632195	632328	130	+	.	.
scaffold343	subtractBed	intrn	632850	633427	.	-	.	Parent=CGI_10021768;
	scaffold343	TRF	Tandem_Repeat	632850	633427	753	+	.	.
scaffold343	subtractBed	intrn	632850	633427	.	-	.	Parent=CGI_10021768;
	scaffold343	TRF	Tandem_Repeat	632850	633427	845	+	.	.
scaffold343	subtractBed	intrn	619366	621462	.	+	.	Parent=CGI_10021769;
	scaffold343	WUBlastX	DNA_Zator	619366	621462	1225	+	.	.
scaffold343	subtractBed	intrn	624044	624325	.	+	.	Parent=CGI_10021769;
	scaffold343	WUBlastX	DNA_Kolobok	624044	624325	111	-	.	.
scaffold343	subtractBed	intrn	624008	624271	.	+	.	Parent=CGI_10021769;
	scaffold343	WUBlastX	DNA_Kolobok	624008	624271	141	-	.	.
scaffold343	subtractBed	intrn	638304	638336	.	+	.	Parent=CGI_10021770;
	scaffold343	TRF	Tandem_Repeat	638304	638336	66	+	.	.
scaffold343	subtractBed	intrn	645566	645895	.	-	.	Parent=CGI_10021771;
	scaffold343	TRF	Tandem_Repeat	645566	645895	254	+	.	.
scaffold343	subtractBed	intrn	648143	648177	.	-	.	Parent=CGI_10021771;
	scaffold343	TRF	Tandem_Repeat	648143	648177	70	+	.	.
scaffold343	subtractBed	intrn	646743	646778	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_RTE-BovB	646743	646778	22	-	.	.
scaffold343	subtractBed	intrn	646379	646465	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_RTE-X	646379	646465	23	-	.	.
scaffold343	subtractBed	intrn	647014	647877	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_RTE-BovB	647014	647877	354	-	.	.
scaffold343	subtractBed	intrn	647891	648127	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_RTE-BovB	647891	648127	99	-	.	.
scaffold343	subtractBed	intrn	648177	648224	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_L2	648177	648224	21	-	.	.
scaffold343	subtractBed	intrn	647870	647947	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	LINE_L1	647870	647947	39	-	.	.
scaffold343	subtractBed	intrn	662016	662336	.	-	.	Parent=CGI_10021771;
	scaffold343	WUBlastX	DNA_hAT-Blackja	662016	662336	107	+	.	.
scaffold34302	subtractBed	intrn	12411	12845	.	+	.	Parent=CGI_10001259;
	scaffold34302	WUBlastX	DNA_IS4EU	12411	12845	36	+	.	.
scaffold344	subtractBed	intrn	15035	15101	.	+	.	Parent=CGI_10002322;
	scaffold344	TRF	Tandem_Repeat	15035	15101	80	+	.	.
scaffold344	subtractBed	intrn	15035	15101	.	+	.	Parent=CGI_10002322;
	scaffold344	TRF	Tandem_Repeat	15035	15101	89	+	.	.
scaffold34572	subtractBed	intrn	16138	17151	.	-	.	Parent=CGI_10001316;
	scaffold34572	WUBlastX	DNA_TcMar-Tc1	16138	17151	406	-	.	.
scaffold34594	subtractBed	intrn	7912	8160	.	+	.	Parent=CGI_10001317;
	scaffold34594	TRF	Tandem_Repeat	7912	8160	301	+	.	.
scaffold34594	subtractBed	intrn	6663	7262	.	+	.	Parent=CGI_10001317;
	scaffold34594	WUBlastX	LINE_L2	6663	7262	80	-	.	.
scaffold34594	subtractBed	intrn	6113	6667	.	+	.	Parent=CGI_10001317;
	scaffold34594	WUBlastX	LINE_L2	6113	6667	186	-	.	.
scaffold34594	subtractBed	intrn	6678	7181	.	+	.	Parent=CGI_10001317;
	scaffold34594	WUBlastX	LINE_L2	6678	7181	273	-	.	.
scaffold34594	subtractBed	intrn	12312	12341	.	+	.	Parent=CGI_10001317;
	scaffold34594	TRF	Tandem_Repeat	12312	12341	51	+	.	.
scaffold34594	subtractBed	intrn	13524	13608	.	+	.	Parent=CGI_10001317;
	scaffold34594	TRF	Tandem_Repeat	13524	13608	61	+	.	.
scaffold34594	subtractBed	intrn	15902	15968	.	+	.	Parent=CGI_10001317;
	scaffold34594	TRF	Tandem_Repeat	15902	15968	134	+	.	.
scaffold34596	subtractBed	intrn	3040	4112	.	-	.	Parent=CGI_10001323;
	scaffold34596	TRF	Tandem_Repeat	3040	4112	964	+	.	.
scaffold34596	subtractBed	intrn	8359	8462	.	-	.	Parent=CGI_10001323;
	scaffold34596	TRF	Tandem_Repeat	8359	8462	70	+	.	.
scaffold34596	subtractBed	intrn	6743	6757	.	-	.	Parent=CGI_10001323;
	scaffold34596	WUBlastX	DNA_TcMar-Tc1	6662	6757	29	+	.	.
scaffold34596	subtractBed	intrn	6852	7226	.	-	.	Parent=CGI_10001323;
	scaffold34596	WUBlastX	DNA_TcMar-Tc1	6852	7226	108	+	.	.
scaffold34596	subtractBed	intrn	6921	7226	.	-	.	Parent=CGI_10001323;
	scaffold34596	WUBlastX	DNA_TcMar-Tc1	6921	7226	186	+	.	.
scaffold34596	subtractBed	intrn	11814	11880	.	-	.	Parent=CGI_10001323;
	scaffold34596	TRF	Tandem_Repeat	11814	11880	71	+	.	.
scaffold34596	subtractBed	intrn	14427	14551	.	-	.	Parent=CGI_10001323;
	scaffold34596	TRF	Tandem_Repeat	14427	14551	139	+	.	.
scaffold34596	subtractBed	intrn	3040	4112	.	+	.	Parent=CGI_10001324;
	scaffold34596	TRF	Tandem_Repeat	3040	4112	964	+	.	.
scaffold34694	subtractBed	intrn	11077	11200	.	+	.	Parent=CGI_10001356;
	scaffold34694	TRF	Tandem_Repeat	11077	11200	221	+	.	.
scaffold347	subtractBed	intrn	3782	4250	.	+	.	Parent=CGI_10021774;
	scaffold347	TRF	Tandem_Repeat	3782	4250	834	+	.	.
scaffold347	subtractBed	intrn	5725	5814	.	+	.	Parent=CGI_10021774;
	scaffold347	TRF	Tandem_Repeat	5725	5814	90	+	.	.
scaffold347	subtractBed	intrn	13537	13564	.	+	.	Parent=CGI_10021775;
	scaffold347	TRF	Tandem_Repeat	13537	13564	56	+	.	.
scaffold347	subtractBed	intrn	14507	14537	.	+	.	Parent=CGI_10021775;
	scaffold347	TRF	Tandem_Repeat	14507	14537	62	+	.	.
scaffold347	subtractBed	intrn	16477	16529	.	+	.	Parent=CGI_10021775;
	scaffold347	TRF	Tandem_Repeat	16477	16529	90	+	.	.
scaffold347	subtractBed	intrn	127569	127868	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	127569	127868	123	+	.	.
scaffold347	subtractBed	intrn	129671	130129	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	129671	130129	308	+	.	.
scaffold347	subtractBed	intrn	129498	129683	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	129498	129683	98	+	.	.
scaffold347	subtractBed	intrn	129671	130255	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	129671	130255	257	+	.	.
scaffold347	subtractBed	intrn	129211	129528	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	129211	129528	105	+	.	.
scaffold347	subtractBed	intrn	127494	127868	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	127494	127868	24	+	.	.
scaffold347	subtractBed	intrn	130246	130407	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	130246	130407	105	+	.	.
scaffold347	subtractBed	intrn	129100	129528	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	129100	129528	82	+	.	.
scaffold347	subtractBed	intrn	127873	128097	.	-	.	Parent=CGI_10021779;
	scaffold347	WUBlastX	LINE_CR1	127873	128097	166	+	.	.
scaffold347	subtractBed	intrn	132858	132896	.	-	.	Parent=CGI_10021779;
	scaffold347	TRF	Tandem_Repeat	132858	132896	78	+	.	.
scaffold347	subtractBed	intrn	151337	151634	.	-	.	Parent=CGI_10021780;
	scaffold347	TRF	Tandem_Repeat	151337	151634	249	+	.	.
scaffold347	subtractBed	intrn	151270	151661	.	-	.	Parent=CGI_10021780;
	scaffold347	TRF	Tandem_Repeat	151270	151661	445	+	.	.
scaffold347	subtractBed	intrn	151389	151661	.	-	.	Parent=CGI_10021780;
	scaffold347	TRF	Tandem_Repeat	151389	151661	458	+	.	.
scaffold347	subtractBed	intrn	164878	165198	.	-	.	Parent=CGI_10021782;
	scaffold347	TRF	Tandem_Repeat	164878	165198	498	+	.	.
scaffold347	subtractBed	intrn	203753	204078	.	+	.	Parent=CGI_10021784;
	scaffold347	TRF	Tandem_Repeat	203753	204078	428	+	.	.
scaffold347	subtractBed	intrn	204303	204535	.	+	.	Parent=CGI_10021784;
	scaffold347	TRF	Tandem_Repeat	204303	204535	385	+	.	.
scaffold347	subtractBed	intrn	233113	233846	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	233113	233846	1117	+	.	.
scaffold347	subtractBed	intrn	235028	235221	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	235028	235221	248	+	.	.
scaffold347	subtractBed	intrn	235028	235223	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	235028	235223	286	+	.	.
scaffold347	subtractBed	intrn	235347	235574	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	235347	235574	375	+	.	.
scaffold347	subtractBed	intrn	239236	239651	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	239236	239651	760	+	.	.
scaffold347	subtractBed	intrn	244774	245221	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	244774	245221	797	+	.	.
scaffold347	subtractBed	intrn	252448	253394	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	252448	253394	1262	+	.	.
scaffold347	subtractBed	intrn	252620	253394	.	-	.	Parent=CGI_10021787;
	scaffold347	TRF	Tandem_Repeat	252620	253394	935	+	.	.
scaffold347	subtractBed	intrn	261341	261961	.	-	.	Parent=CGI_10021787;
	scaffold347	WUBlastX	LINE_CR1	261341	261961	40	-	.	.
scaffold347	subtractBed	intrn	261027	261164	.	-	.	Parent=CGI_10021787;
	scaffold347	WUBlastX	LINE_RTE-X	261027	261164	31	-	.	.
scaffold347	subtractBed	intrn	261167	261802	.	-	.	Parent=CGI_10021787;
	scaffold347	WUBlastX	LINE_L1-Tx1	261167	261802	47	-	.	.
scaffold347	subtractBed	intrn	261269	261778	.	-	.	Parent=CGI_10021787;
	scaffold347	WUBlastX	LINE_RTE-X	261269	261778	246	-	.	.
scaffold347	subtractBed	intrn	261533	261850	.	-	.	Parent=CGI_10021787;
	scaffold347	WUBlastX	LINE_I	261533	261850	56	-	.	.
scaffold347	subtractBed	intrn	280449	280486	.	+	.	Parent=CGI_10021789;
	scaffold347	TRF	Tandem_Repeat	280449	280486	76	+	.	.
scaffold347	subtractBed	intrn	287088	287452	.	+	.	Parent=CGI_10021789;
	scaffold347	TRF	Tandem_Repeat	287088	287452	209	+	.	.
scaffold347	subtractBed	intrn	287091	287452	.	+	.	Parent=CGI_10021789;
	scaffold347	TRF	Tandem_Repeat	287091	287452	593	+	.	.
scaffold347	subtractBed	intrn	301273	301343	.	-	.	Parent=CGI_10021792;
	scaffold347	TRF	Tandem_Repeat	301273	301343	142	+	.	.
scaffold347	subtractBed	intrn	302446	302890	.	-	.	Parent=CGI_10021792;
	scaffold347	TRF	Tandem_Repeat	302446	302890	718	+	.	.
scaffold347	subtractBed	intrn	302446	302506	.	-	.	Parent=CGI_10021792;
	scaffold347	TRF	Tandem_Repeat	302446	302506	53	+	.	.
scaffold347	subtractBed	intrn	304278	304444	.	-	.	Parent=CGI_10021792;
	scaffold347	TRF	Tandem_Repeat	304278	304444	298	+	.	.
scaffold347	subtractBed	intrn	305078	305463	.	-	.	Parent=CGI_10021792;
	scaffold347	TRF	Tandem_Repeat	305078	305463	169	+	.	.
scaffold347	subtractBed	intrn	321157	321213	.	+	.	Parent=CGI_10021794;
	scaffold347	TRF	Tandem_Repeat	321157	321213	114	+	.	.
scaffold347	subtractBed	intrn	360629	361471	.	-	.	Parent=CGI_10021795;
	scaffold347	TRF	Tandem_Repeat	360629	361471	1040	+	.	.
scaffold347	subtractBed	intrn	366954	368077	.	-	.	Parent=CGI_10021795;
	scaffold347	TRF	Tandem_Repeat	366954	368077	1644	+	.	.
scaffold347	subtractBed	intrn	481724	481758	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	481724	481758	70	+	.	.
scaffold347	subtractBed	intrn	482700	482999	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	482700	482999	313	+	.	.
scaffold347	subtractBed	intrn	485085	485626	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	485085	485626	671	+	.	.
scaffold347	subtractBed	intrn	485085	485626	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	485085	485626	585	+	.	.
scaffold347	subtractBed	intrn	486289	487067	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	486289	487067	560	+	.	.
scaffold347	subtractBed	intrn	487237	487275	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	487237	487275	69	+	.	.
scaffold347	subtractBed	intrn	491053	491387	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	491053	491387	267	+	.	.
scaffold347	subtractBed	intrn	491062	491429	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	491062	491429	393	+	.	.
scaffold347	subtractBed	intrn	491075	491429	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	491075	491429	335	+	.	.
scaffold347	subtractBed	intrn	491068	491429	.	+	.	Parent=CGI_10021798;
	scaffold347	TRF	Tandem_Repeat	491068	491429	225	+	.	.
scaffold347	subtractBed	intrn	526502	526535	.	+	.	Parent=CGI_10021800;
	scaffold347	TRF	Tandem_Repeat	526502	526535	59	+	.	.
scaffold347	subtractBed	intrn	596347	598155	.	+	.	Parent=CGI_10021803;
	scaffold347	WUBlastX	LTR_Pao	596347	598155	500	-	.	.
scaffold347	subtractBed	intrn	596347	597837	.	+	.	Parent=CGI_10021803;
	scaffold347	WUBlastX	LTR_Pao	596347	597837	545	-	.	.
scaffold347	subtractBed	intrn	643681	643749	.	+	.	Parent=CGI_10021804;
	scaffold347	TRF	Tandem_Repeat	643681	643749	138	+	.	.
scaffold347	subtractBed	intrn	645244	645362	.	+	.	Parent=CGI_10021804;
	scaffold347	TRF	Tandem_Repeat	645244	645362	193	+	.	.
scaffold347	subtractBed	intrn	654810	655823	.	-	.	Parent=CGI_10021805;
	scaffold347	WUBlastX	DNA_TcMar-Tc1	654810	655823	386	-	.	.
scaffold347	subtractBed	intrn	705980	706005	.	+	.	Parent=CGI_10021806;
	scaffold347	TRF	Tandem_Repeat	705980	706005	52	+	.	.
scaffold34732	subtractBed	intrn	13638	13746	.	-	.	Parent=CGI_10001335;
	scaffold34732	TRF	Tandem_Repeat	13638	13746	92	+	.	.
scaffold34732	subtractBed	intrn	16245	16373	.	-	.	Parent=CGI_10001335;
	scaffold34732	WUBlastX	LINE_L1	16245	16373	54	+	.	.
scaffold34732	subtractBed	intrn	18141	18289	.	-	.	Parent=CGI_10001335;
	scaffold34732	TRF	Tandem_Repeat	18141	18289	104	+	.	.
scaffold34732	subtractBed	intrn	16352	16564	.	-	.	Parent=CGI_10001335;
	scaffold34732	WUBlastX	LINE_L1-Tx1	16352	16564	47	+	.	.
scaffold34732	subtractBed	intrn	16367	16708	.	-	.	Parent=CGI_10001335;
	scaffold34732	WUBlastX	LINE_L1-Tx1	16367	16708	31	+	.	.
scaffold34732	subtractBed	intrn	16104	16385	.	-	.	Parent=CGI_10001335;
	scaffold34732	WUBlastX	LINE_L1-Tx1	16104	16385	47	+	.	.
scaffold348	subtractBed	intrn	130459	130857	.	+	.	Parent=CGI_10022971;
	scaffold348	WUBlastX	LINE_L2	130459	130857	117	+	.	.
scaffold348	subtractBed	intrn	130447	130462	.	+	.	Parent=CGI_10022971;
	scaffold348	WUBlastX	LINE_L1	130235	130462	24	+	.	.
scaffold348	subtractBed	intrn	162084	162199	.	+	.	Parent=CGI_10022972;
	scaffold348	TRF	Tandem_Repeat	162084	162199	119	+	.	.
scaffold348	subtractBed	intrn	165029	165391	.	+	.	Parent=CGI_10022972;
	scaffold348	WUBlastX	LINE_L1-Tx1	165029	165391	66	-	.	.
scaffold348	subtractBed	intrn	170630	170682	.	+	.	Parent=CGI_10022972;
	scaffold348	TRF	Tandem_Repeat	170630	170682	97	+	.	.
scaffold348	subtractBed	intrn	173954	174005	.	+	.	Parent=CGI_10022972;
	scaffold348	TRF	Tandem_Repeat	173954	174005	104	+	.	.
scaffold348	subtractBed	intrn	176054	176308	.	+	.	Parent=CGI_10022972;
	scaffold348	WUBlastX	LINE_Penelope	176054	176308	65	-	.	.
scaffold348	subtractBed	intrn	180195	180243	.	+	.	Parent=CGI_10022972;
	scaffold348	TRF	Tandem_Repeat	180195	180243	80	+	.	.
scaffold348	subtractBed	intrn	181688	181900	.	+	.	Parent=CGI_10022972;
	scaffold348	WUBlastX	LINE_L1-Tx1	181688	181900	26	-	.	.
scaffold348	subtractBed	intrn	200275	200323	.	+	.	Parent=CGI_10022973;
	scaffold348	TRF	Tandem_Repeat	200275	200323	98	+	.	.
scaffold348	subtractBed	intrn	202364	202485	.	+	.	Parent=CGI_10022973;
	scaffold348	TRF	Tandem_Repeat	202364	202485	208	+	.	.
scaffold348	subtractBed	intrn	211014	211042	.	+	.	Parent=CGI_10022974;
	scaffold348	TRF	Tandem_Repeat	211014	211042	58	+	.	.
scaffold348	subtractBed	intrn	216540	217210	.	+	.	Parent=CGI_10022974;
	scaffold348	TRF	Tandem_Repeat	216540	218857	2610	+	.	.
scaffold348	subtractBed	intrn	216540	217210	.	-	.	Parent=CGI_10022975;
	scaffold348	TRF	Tandem_Repeat	216540	218857	2610	+	.	.
scaffold348	subtractBed	intrn	218387	218857	.	-	.	Parent=CGI_10022975;
	scaffold348	TRF	Tandem_Repeat	216540	218857	2610	+	.	.
scaffold348	subtractBed	intrn	233382	233772	.	+	.	Parent=CGI_10022976;
	scaffold348	TRF	Tandem_Repeat	233382	233772	269	+	.	.
scaffold348	subtractBed	intrn	237093	237123	.	+	.	Parent=CGI_10022976;
	scaffold348	TRF	Tandem_Repeat	237093	237123	53	+	.	.
scaffold348	subtractBed	intrn	339814	339842	.	+	.	Parent=CGI_10022980;
	scaffold348	TRF	Tandem_Repeat	339814	339842	58	+	.	.
scaffold348	subtractBed	intrn	343774	343813	.	+	.	Parent=CGI_10022980;
	scaffold348	TRF	Tandem_Repeat	343774	343813	80	+	.	.
scaffold348	subtractBed	intrn	376855	376894	.	-	.	Parent=CGI_10022982;
	scaffold348	TRF	Tandem_Repeat	376855	376894	80	+	.	.
scaffold348	subtractBed	intrn	436771	436830	.	-	.	Parent=CGI_10022984;
	scaffold348	TRF	Tandem_Repeat	436771	436830	120	+	.	.
scaffold348	subtractBed	intrn	446762	446827	.	+	.	Parent=CGI_10022985;
	scaffold348	TRF	Tandem_Repeat	446762	446827	132	+	.	.
scaffold348	subtractBed	intrn	484287	484311	.	+	.	Parent=CGI_10022987;
	scaffold348	TRF	Tandem_Repeat	484287	484311	50	+	.	.
scaffold348	subtractBed	intrn	555050	555577	.	-	.	Parent=CGI_10022990;
	scaffold348	TRF	Tandem_Repeat	555050	555577	428	+	.	.
scaffold348	subtractBed	intrn	555160	555775	.	-	.	Parent=CGI_10022990;
	scaffold348	TRF	Tandem_Repeat	555160	555775	740	+	.	.
scaffold348	subtractBed	intrn	555623	555775	.	-	.	Parent=CGI_10022990;
	scaffold348	TRF	Tandem_Repeat	555623	555775	166	+	.	.
scaffold348	subtractBed	intrn	560091	560378	.	-	.	Parent=CGI_10022990;
	scaffold348	TRF	Tandem_Repeat	560091	560378	375	+	.	.
scaffold348	subtractBed	intrn	568941	569675	.	-	.	Parent=CGI_10022990;
	scaffold348	TRF	Tandem_Repeat	568941	569675	1044	+	.	.
scaffold348	subtractBed	intrn	619125	619190	.	+	.	Parent=CGI_10022991;
	scaffold348	TRF	Tandem_Repeat	619125	619190	123	+	.	.
scaffold348	subtractBed	intrn	639179	640637	.	-	.	Parent=CGI_10022993;
	scaffold348	TRF	Tandem_Repeat	639179	640637	2148	+	.	.
scaffold348	subtractBed	intrn	641012	641047	.	-	.	Parent=CGI_10022993;
	scaffold348	TRF	Tandem_Repeat	641012	641047	72	+	.	.
scaffold348	subtractBed	intrn	642723	642779	.	-	.	Parent=CGI_10022993;
	scaffold348	TRF	Tandem_Repeat	642723	642779	50	+	.	.
scaffold348	subtractBed	intrn	650168	650346	.	+	.	Parent=CGI_10022994;
	scaffold348	TRF	Tandem_Repeat	650164	650346	157	+	.	.
scaffold348	subtractBed	intrn	716580	716658	.	-	.	Parent=CGI_10023001;
	scaffold348	TRF	Tandem_Repeat	716580	716658	151	+	.	.
scaffold348	subtractBed	intrn	720201	720326	.	-	.	Parent=CGI_10023001;
	scaffold348	WUBlastX	DNA_Kolobok	720201	720326	59	+	.	.
scaffold348	subtractBed	intrn	723420	723457	.	-	.	Parent=CGI_10023001;
	scaffold348	TRF	Tandem_Repeat	723420	723457	76	+	.	.
scaffold348	subtractBed	intrn	724983	725046	.	-	.	Parent=CGI_10023001;
	scaffold348	TRF	Tandem_Repeat	724983	725046	128	+	.	.
scaffold348	subtractBed	intrn	731777	731809	.	-	.	Parent=CGI_10023001;
	scaffold348	TRF	Tandem_Repeat	731777	731809	52	+	.	.
scaffold34942	subtractBed	intrn	7656	7737	.	-	.	Parent=CGI_10001379;
	scaffold34942	TRF	Tandem_Repeat	7656	7737	146	+	.	.
scaffold34942	subtractBed	intrn	10817	10818	.	-	.	Parent=CGI_10001379;
	scaffold34942	WUBlastX	DNA_Kolobok	10817	10957	38	+	.	.
scaffold34942	subtractBed	intrn	11334	11483	.	-	.	Parent=CGI_10001379;
	scaffold34942	WUBlastX	DNA_Kolobok	11334	11483	96	-	.	.
scaffold34942	subtractBed	intrn	11627	11788	.	-	.	Parent=CGI_10001379;
	scaffold34942	WUBlastX	DNA_Kolobok	11627	11788	73	-	.	.
scaffold34942	subtractBed	intrn	11895	12086	.	-	.	Parent=CGI_10001379;
	scaffold34942	WUBlastX	DNA_Kolobok	11895	12086	64	-	.	.
scaffold34942	subtractBed	intrn	11862	12092	.	-	.	Parent=CGI_10001379;
	scaffold34942	WUBlastX	DNA_Kolobok	11862	12092	50	-	.	.
scaffold34942	subtractBed	intrn	10817	10818	.	+	.	Parent=CGI_10001380;
	scaffold34942	WUBlastX	DNA_Kolobok	10817	10957	38	+	.	.
scaffold35004	subtractBed	intrn	20135	20323	.	+	.	Parent=CGI_10001394;
	scaffold35004	WUBlastX	LINE_RTE-X	20135	20323	82	-	.	.
scaffold35004	subtractBed	intrn	20174	20329	.	+	.	Parent=CGI_10001394;
	scaffold35004	WUBlastX	LINE_RTE-X	20174	20329	98	-	.	.
scaffold35004	subtractBed	intrn	20171	20371	.	+	.	Parent=CGI_10001394;
	scaffold35004	WUBlastX	LINE_RTE-X	20171	20371	43	-	.	.
scaffold35014	subtractBed	intrn	3090	3286	.	+	.	Parent=CGI_10001387;
	scaffold35014	TRF	Tandem_Repeat	3090	3286	109	+	.	.
scaffold35014	subtractBed	intrn	3169	3320	.	+	.	Parent=CGI_10001387;
	scaffold35014	TRF	Tandem_Repeat	3169	3320	58	+	.	.
scaffold35014	subtractBed	intrn	7333	7455	.	+	.	Parent=CGI_10001388;
	scaffold35014	TRF	Tandem_Repeat	7333	7455	228	+	.	.
scaffold35014	subtractBed	intrn	13970	14110	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	13970	14110	65	+	.	.
scaffold35014	subtractBed	intrn	13162	13533	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	13162	13533	80	+	.	.
scaffold35014	subtractBed	intrn	14617	14799	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	14617	14799	77	+	.	.
scaffold35014	subtractBed	intrn	14617	14832	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	14617	14832	55	+	.	.
scaffold35014	subtractBed	intrn	15972	16160	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	15972	16160	83	+	.	.
scaffold35014	subtractBed	intrn	15391	15504	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	15391	15504	27	+	.	.
scaffold35014	subtractBed	intrn	15939	16082	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	15939	16082	36	+	.	.
scaffold35014	subtractBed	intrn	15397	15465	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	15397	15465	48	+	.	.
scaffold35014	subtractBed	intrn	16241	16519	.	+	.	Parent=CGI_10001389;
	scaffold35014	WUBlastX	DNA_PiggyBac	16241	16519	113	+	.	.
scaffold351	subtractBed	intrn	37010	37043	.	+	.	Parent=CGI_10022588;
	scaffold351	TRF	Tandem_Repeat	37010	37043	50	+	.	.
scaffold351	subtractBed	intrn	88836	89093	.	-	.	Parent=CGI_10022590;
	scaffold351	WUBlastX	LTR_Ngaro	88836	89093	64	-	.	.
scaffold351	subtractBed	intrn	88836	89174	.	-	.	Parent=CGI_10022590;
	scaffold351	WUBlastX	LTR_Ngaro	88836	89174	57	-	.	.
scaffold351	subtractBed	intrn	102671	103180	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	102671	103180	169	+	.	.
scaffold351	subtractBed	intrn	102689	103408	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	102689	103408	167	+	.	.
scaffold351	subtractBed	intrn	102286	102585	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	102286	102585	82	-	.	.
scaffold351	subtractBed	intrn	101852	102289	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	101852	102289	103	-	.	.
scaffold351	subtractBed	intrn	103402	103536	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	103402	103536	34	+	.	.
scaffold351	subtractBed	intrn	102582	102638	.	-	.	Parent=CGI_10022591;
	scaffold351	WUBlastX	LINE_Penelope	102582	102638	26	-	.	.
scaffold351	subtractBed	intrn	105322	105430	.	-	.	Parent=CGI_10022592;
	scaffold351	TRF	Tandem_Repeat	105322	105430	191	+	.	.
scaffold351	subtractBed	intrn	109501	109543	.	-	.	Parent=CGI_10022592;
	scaffold351	TRF	Tandem_Repeat	109501	109543	86	+	.	.
scaffold351	subtractBed	intrn	121390	121434	.	-	.	Parent=CGI_10022593;
	scaffold351	TRF	Tandem_Repeat	121390	121434	51	+	.	.
scaffold351	subtractBed	intrn	129817	129863	.	-	.	Parent=CGI_10022593;
	scaffold351	TRF	Tandem_Repeat	129817	129863	58	+	.	.
scaffold351	subtractBed	intrn	184820	184975	.	+	.	Parent=CGI_10022595;
	scaffold351	WUBlastX	LTR_Copia	184820	184975	25	-	.	.
scaffold351	subtractBed	intrn	184943	185146	.	+	.	Parent=CGI_10022595;
	scaffold351	WUBlastX	LTR_ERV1	184943	185146	20	-	.	.
scaffold351	subtractBed	intrn	185051	185131	.	+	.	Parent=CGI_10022595;
	scaffold351	WUBlastX	LTR_Gypsy	185051	185131	25	-	.	.
scaffold351	subtractBed	intrn	185203	185364	.	+	.	Parent=CGI_10022595;
	scaffold351	WUBlastX	LTR_ERVK	185203	185364	34	-	.	.
scaffold351	subtractBed	intrn	302245	302430	.	-	.	Parent=CGI_10022603;
	scaffold351	WUBlastX	LTR_Pao	302245	302430	40	-	.	.
scaffold351	subtractBed	intrn	298997	299506	.	-	.	Parent=CGI_10022603;
	scaffold351	WUBlastX	DNA_Maverick	298997	299506	124	+	.	.
scaffold351	subtractBed	intrn	298878	298973	.	-	.	Parent=CGI_10022603;
	scaffold351	WUBlastX	DNA_Maverick	298878	298973	27	+	.	.
scaffold351	subtractBed	intrn	306897	307292	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	306897	307292	68	+	.	.
scaffold351	subtractBed	intrn	309746	309825	.	+	.	Parent=CGI_10022605;
	scaffold351	TRF	Tandem_Repeat	309746	309825	151	+	.	.
scaffold351	subtractBed	intrn	312738	313628	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	LINE_L1-Tx1	312738	313628	169	-	.	.
scaffold351	subtractBed	intrn	311679	312191	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	311679	312191	175	+	.	.
scaffold351	subtractBed	intrn	313642	314280	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	313642	314280	210	+	.	.
scaffold351	subtractBed	intrn	313573	314661	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	313573	314778	108	+	.	.
scaffold351	subtractBed	intrn	314936	314936	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	314936	315118	78	+	.	.
scaffold351	subtractBed	intrn	314933	314936	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	314933	315085	108	+	.	.
scaffold351	subtractBed	intrn	314750	314778	.	+	.	Parent=CGI_10022605;
	scaffold351	WUBlastX	DNA_Sola	313573	314778	108	+	.	.
scaffold351	subtractBed	intrn	369687	369722	.	+	.	Parent=CGI_10022606;
	scaffold351	TRF	Tandem_Repeat	369687	369722	72	+	.	.
scaffold351	subtractBed	intrn	412408	412466	.	+	.	Parent=CGI_10022607;
	scaffold351	TRF	Tandem_Repeat	412408	412466	54	+	.	.
scaffold351	subtractBed	intrn	412584	412620	.	+	.	Parent=CGI_10022607;
	scaffold351	TRF	Tandem_Repeat	412584	412620	74	+	.	.
scaffold351	subtractBed	intrn	414761	414844	.	+	.	Parent=CGI_10022607;
	scaffold351	TRF	Tandem_Repeat	414761	414844	61	+	.	.
scaffold351	subtractBed	intrn	414799	414849	.	+	.	Parent=CGI_10022607;
	scaffold351	TRF	Tandem_Repeat	414799	414849	57	+	.	.
scaffold351	subtractBed	intrn	564332	564730	.	-	.	Parent=CGI_10022611;
	scaffold351	TRF	Tandem_Repeat	564332	564730	461	+	.	.
scaffold351	subtractBed	intrn	564332	564697	.	-	.	Parent=CGI_10022611;
	scaffold351	TRF	Tandem_Repeat	564332	564697	448	+	.	.
scaffold351	subtractBed	intrn	566316	566349	.	-	.	Parent=CGI_10022611;
	scaffold351	TRF	Tandem_Repeat	566316	566349	50	+	.	.
scaffold351	subtractBed	intrn	576130	576173	.	+	.	Parent=CGI_10022612;
	scaffold351	TRF	Tandem_Repeat	576130	576173	88	+	.	.
scaffold351	subtractBed	intrn	576262	576295	.	+	.	Parent=CGI_10022612;
	scaffold351	TRF	Tandem_Repeat	576262	576295	68	+	.	.
scaffold351	subtractBed	intrn	590379	590409	.	-	.	Parent=CGI_10022614;
	scaffold351	TRF	Tandem_Repeat	590379	590409	62	+	.	.
scaffold351	subtractBed	intrn	605368	605449	.	+	.	Parent=CGI_10022615;
	scaffold351	TRF	Tandem_Repeat	605368	605449	92	+	.	.
scaffold351	subtractBed	intrn	610331	610526	.	-	.	Parent=CGI_10022616;
	scaffold351	TRF	Tandem_Repeat	610331	610526	189	+	.	.
scaffold351	subtractBed	intrn	610492	610683	.	-	.	Parent=CGI_10022616;
	scaffold351	TRF	Tandem_Repeat	610492	610683	339	+	.	.
scaffold351	subtractBed	intrn	613480	613641	.	-	.	Parent=CGI_10022616;
	scaffold351	TRF	Tandem_Repeat	613480	613641	139	+	.	.
scaffold351	subtractBed	intrn	626892	626963	.	-	.	Parent=CGI_10022616;
	scaffold351	TRF	Tandem_Repeat	626892	626963	135	+	.	.
scaffold351	subtractBed	intrn	634884	634966	.	+	.	Parent=CGI_10022617;
	scaffold351	TRF	Tandem_Repeat	634884	634966	139	+	.	.
scaffold351	subtractBed	intrn	644813	644862	.	-	.	Parent=CGI_10022618;
	scaffold351	TRF	Tandem_Repeat	644813	644862	100	+	.	.
scaffold351	subtractBed	intrn	665592	665641	.	+	.	Parent=CGI_10022620;
	scaffold351	TRF	Tandem_Repeat	665592	665641	59	+	.	.
scaffold351	subtractBed	intrn	674234	674266	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	674234	674266	57	+	.	.
scaffold351	subtractBed	intrn	681616	681764	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	681616	681764	174	+	.	.
scaffold351	subtractBed	intrn	682783	682931	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	682783	682931	165	+	.	.
scaffold351	subtractBed	intrn	682786	682868	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	682786	682868	51	+	.	.
scaffold351	subtractBed	intrn	682822	682905	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	682822	682905	55	+	.	.
scaffold351	subtractBed	intrn	683948	684096	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	683948	684096	165	+	.	.
scaffold351	subtractBed	intrn	683951	684033	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	683951	684033	51	+	.	.
scaffold351	subtractBed	intrn	683987	684070	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	683987	684070	55	+	.	.
scaffold351	subtractBed	intrn	685147	685291	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	685147	685291	168	+	.	.
scaffold351	subtractBed	intrn	685147	685321	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	685147	685321	147	+	.	.
scaffold351	subtractBed	intrn	690758	690899	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	690758	690899	149	+	.	.
scaffold351	subtractBed	intrn	690908	691145	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	690908	691145	217	+	.	.
scaffold351	subtractBed	intrn	691154	691391	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	691154	691391	217	+	.	.
scaffold351	subtractBed	intrn	691400	691637	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	691400	691637	217	+	.	.
scaffold351	subtractBed	intrn	691646	691883	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	691646	691883	217	+	.	.
scaffold351	subtractBed	intrn	691892	692129	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	691892	692129	217	+	.	.
scaffold351	subtractBed	intrn	692138	692375	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	692138	692375	217	+	.	.
scaffold351	subtractBed	intrn	692384	692621	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	692384	692621	217	+	.	.
scaffold351	subtractBed	intrn	692630	692867	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	692630	692867	217	+	.	.
scaffold351	subtractBed	intrn	692876	693113	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	692876	693113	217	+	.	.
scaffold351	subtractBed	intrn	693122	693359	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693122	693359	208	+	.	.
scaffold351	subtractBed	intrn	693368	693605	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693368	693605	226	+	.	.
scaffold351	subtractBed	intrn	693443	693531	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693443	693531	66	+	.	.
scaffold351	subtractBed	intrn	693183	694212	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693183	694212	652	+	.	.
scaffold351	subtractBed	intrn	693655	693744	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693655	693744	50	+	.	.
scaffold351	subtractBed	intrn	693830	694064	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	693830	694064	211	+	.	.
scaffold351	subtractBed	intrn	690797	693741	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	690797	693741	5683	+	.	.
scaffold351	subtractBed	intrn	690767	694218	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	690767	694218	4354	+	.	.
scaffold351	subtractBed	intrn	694073	694219	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	694073	694219	168	+	.	.
scaffold351	subtractBed	intrn	694999	695145	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	694999	695145	168	+	.	.
scaffold351	subtractBed	intrn	698155	698365	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698155	698365	242	+	.	.
scaffold351	subtractBed	intrn	698374	698537	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698374	698537	175	+	.	.
scaffold351	subtractBed	intrn	698155	699143	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698155	699143	1093	+	.	.
scaffold351	subtractBed	intrn	698401	698960	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698401	698960	289	+	.	.
scaffold351	subtractBed	intrn	698709	698802	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698709	698802	56	+	.	.
scaffold351	subtractBed	intrn	698815	698978	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698815	698978	166	+	.	.
scaffold351	subtractBed	intrn	698440	699143	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698440	699143	519	+	.	.
scaffold351	subtractBed	intrn	699016	699320	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	699016	699320	178	+	.	.
scaffold351	subtractBed	intrn	698369	700598	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	698369	700598	1905	+	.	.
scaffold351	subtractBed	intrn	699190	699353	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	699190	699353	159	+	.	.
scaffold351	subtractBed	intrn	699281	699743	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	699281	699743	374	+	.	.
scaffold351	subtractBed	intrn	699631	699794	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	699631	699794	166	+	.	.
scaffold351	subtractBed	intrn	699658	700217	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	699658	700217	282	+	.	.
scaffold351	subtractBed	intrn	700069	700235	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	700069	700235	181	+	.	.
scaffold351	subtractBed	intrn	700273	700522	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	700273	700522	182	+	.	.
scaffold351	subtractBed	intrn	710404	710630	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	710404	710630	179	+	.	.
scaffold351	subtractBed	intrn	710656	710797	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	710656	710797	140	+	.	.
scaffold351	subtractBed	intrn	715812	715996	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	715812	715996	129	+	.	.
scaffold351	subtractBed	intrn	716019	716157	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	716019	716157	129	+	.	.
scaffold351	subtractBed	intrn	716169	716428	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	716169	716428	195	+	.	.
scaffold351	subtractBed	intrn	716202	716490	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	716202	716490	287	+	.	.
scaffold351	subtractBed	intrn	717534	717572	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	717534	717572	69	+	.	.
scaffold351	subtractBed	intrn	718374	718413	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	718374	718413	71	+	.	.
scaffold351	subtractBed	intrn	724779	725351	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	724779	725351	270	+	.	.
scaffold351	subtractBed	intrn	724810	725537	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	724810	725537	334	+	.	.
scaffold351	subtractBed	intrn	724765	725537	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	724765	725537	1000	+	.	.
scaffold351	subtractBed	intrn	724876	725513	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	724876	725513	260	+	.	.
scaffold351	subtractBed	intrn	734645	734786	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	734645	734786	149	+	.	.
scaffold351	subtractBed	intrn	734909	735047	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	734909	735047	152	+	.	.
scaffold351	subtractBed	intrn	735056	735197	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	735056	735197	142	+	.	.
scaffold351	subtractBed	intrn	737836	737876	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	737836	737876	73	+	.	.
scaffold351	subtractBed	intrn	743867	743941	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	743867	743941	150	+	.	.
scaffold351	subtractBed	intrn	743993	744036	.	+	.	Parent=CGI_10022621;
	scaffold351	TRF	Tandem_Repeat	743993	744036	88	+	.	.
scaffold351	subtractBed	intrn	758842	758897	.	+	.	Parent=CGI_10022622;
	scaffold351	TRF	Tandem_Repeat	758842	758897	112	+	.	.
scaffold35138	subtractBed	intrn	23490	23490	.	+	.	Parent=CGI_10001519;
	scaffold35138	WUBlastX	DNA_Sola	23323	23490	65	+	.	.
scaffold35162	subtractBed	intrn	16670	16719	.	-	.	Parent=CGI_10001426;
	scaffold35162	TRF	Tandem_Repeat	16670	16719	75	+	.	.
scaffold35162	subtractBed	intrn	16393	16456	.	-	.	Parent=CGI_10001426;
	scaffold35162	WUBlastX	DNA_Crypton	16025	16456	79	-	.	.
scaffold35180	subtractBed	intrn	11299	11345	.	-	.	Parent=CGI_10001433;
	scaffold35180	TRF	Tandem_Repeat	11299	11345	94	+	.	.
scaffold35180	subtractBed	intrn	9682	10221	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_RTE-X	9682	10221	81	+	.	.
scaffold35180	subtractBed	intrn	10423	10476	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_RTE-X	10423	10476	21	+	.	.
scaffold35180	subtractBed	intrn	9682	10011	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_RTE-X	9682	10011	98	+	.	.
scaffold35180	subtractBed	intrn	17169	18098	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_L1-Tx1	17169	18098	150	-	.	.
scaffold35180	subtractBed	intrn	18335	19555	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_L1-Tx1	18335	19555	334	-	.	.
scaffold35180	subtractBed	intrn	19558	20895	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_L1-Tx1	19558	20895	519	-	.	.
scaffold35180	subtractBed	intrn	18136	18543	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_L1-Tx1	18136	18543	146	-	.	.
scaffold35180	subtractBed	intrn	18542	19594	.	-	.	Parent=CGI_10001433;
	scaffold35180	WUBlastX	LINE_L1-Tx1	18542	19594	593	-	.	.
scaffold352	subtractBed	intrn	10247	10426	.	-	.	Parent=CGI_10012242;
	scaffold352	WUBlastX	DNA_Harbinger	10247	10426	49	-	.	.
scaffold352	subtractBed	intrn	73732	74475	.	+	.	Parent=CGI_10012244;
	scaffold352	WUBlastX	DNA_TcMar-Marin	73732	74475	36	-	.	.
scaffold352	subtractBed	intrn	73649	73732	.	+	.	Parent=CGI_10012244;
	scaffold352	WUBlastX	DNA_TcMar-Marin	73649	73732	34	-	.	.
scaffold352	subtractBed	intrn	73726	74361	.	+	.	Parent=CGI_10012244;
	scaffold352	WUBlastX	DNA_TcMar-Marin	73726	74361	123	-	.	.
scaffold352	subtractBed	intrn	77583	78339	.	+	.	Parent=CGI_10012244;
	scaffold352	TRF	Tandem_Repeat	77583	78339	411	+	.	.
scaffold352	subtractBed	intrn	77583	78339	.	+	.	Parent=CGI_10012244;
	scaffold352	TRF	Tandem_Repeat	77583	78339	496	+	.	.
scaffold352	subtractBed	intrn	98211	98273	.	+	.	Parent=CGI_10012246;
	scaffold352	TRF	Tandem_Repeat	98211	98273	108	+	.	.
scaffold352	subtractBed	intrn	153611	154693	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Pao	153611	154693	22	-	.	.
scaffold352	subtractBed	intrn	156778	156879	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LINE_CR1-L2	156778	156879	34	-	.	.
scaffold352	subtractBed	intrn	156766	156888	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LINE_CR1-L2	156766	156888	23	-	.	.
scaffold352	subtractBed	intrn	157774	157926	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LINE_CR1-L2	157774	157926	61	-	.	.
scaffold352	subtractBed	intrn	153195	153515	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy	153195	153515	71	-	.	.
scaffold352	subtractBed	intrn	149860	151227	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy-Cigr	149860	151227	781	-	.	.
scaffold352	subtractBed	intrn	149833	149985	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Copia	149833	149985	21	-	.	.
scaffold352	subtractBed	intrn	153662	154309	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy	153662	154309	136	-	.	.
scaffold352	subtractBed	intrn	153518	153796	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy	153518	153796	27	-	.	.
scaffold352	subtractBed	intrn	153836	154333	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy-Cigr	153836	154333	189	-	.	.
scaffold352	subtractBed	intrn	153599	154411	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy	153599	154411	69	-	.	.
scaffold352	subtractBed	intrn	151374	153461	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy-Cigr	151374	153461	1279	-	.	.
scaffold352	subtractBed	intrn	157738	157890	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LINE_CR1-L2	157738	157890	42	-	.	.
scaffold352	subtractBed	intrn	151332	153071	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy-Cigr	151332	153071	1327	-	.	.
scaffold352	subtractBed	intrn	150930	152837	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LTR_Gypsy	150930	152837	867	-	.	.
scaffold352	subtractBed	intrn	167542	167583	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	167542	167583	84	+	.	.
scaffold352	subtractBed	intrn	172503	172658	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	172503	172658	81	+	.	.
scaffold352	subtractBed	intrn	172503	172701	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	172503	172701	240	+	.	.
scaffold352	subtractBed	intrn	172503	172732	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	172503	172732	234	+	.	.
scaffold352	subtractBed	intrn	173445	173494	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	173445	173494	100	+	.	.
scaffold352	subtractBed	intrn	174417	174496	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	174417	174496	144	+	.	.
scaffold352	subtractBed	intrn	174528	174554	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	174528	174554	54	+	.	.
scaffold352	subtractBed	intrn	176939	176977	.	-	.	Parent=CGI_10012248;
	scaffold352	TRF	Tandem_Repeat	176939	176977	62	+	.	.
scaffold352	subtractBed	intrn	177272	177526	.	-	.	Parent=CGI_10012248;
	scaffold352	WUBlastX	LINE_Penelope	177272	177526	55	-	.	.
scaffold352	subtractBed	intrn	218540	218654	.	-	.	Parent=CGI_10012250;
	scaffold352	TRF	Tandem_Repeat	218540	218654	90	+	.	.
scaffold352	subtractBed	intrn	218520	218699	.	-	.	Parent=CGI_10012250;
	scaffold352	TRF	Tandem_Repeat	218520	218699	125	+	.	.
scaffold352	subtractBed	intrn	310119	310352	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	310119	310352	35	+	.	.
scaffold352	subtractBed	intrn	313719	313743	.	+	.	Parent=CGI_10012251;
	scaffold352	TRF	Tandem_Repeat	313719	313743	50	+	.	.
scaffold352	subtractBed	intrn	311542	311691	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	311542	311691	43	+	.	.
scaffold352	subtractBed	intrn	312283	312783	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	312283	312783	306	+	.	.
scaffold352	subtractBed	intrn	312286	312924	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	312286	312924	154	+	.	.
scaffold352	subtractBed	intrn	311545	311724	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	311545	311724	32	+	.	.
scaffold352	subtractBed	intrn	312940	313056	.	+	.	Parent=CGI_10012251;
	scaffold352	WUBlastX	DNA_PiggyBac	312940	313056	40	+	.	.
scaffold352	subtractBed	intrn	316148	316194	.	+	.	Parent=CGI_10012251;
	scaffold352	TRF	Tandem_Repeat	316148	316194	85	+	.	.
scaffold352	subtractBed	intrn	318846	318890	.	+	.	Parent=CGI_10012251;
	scaffold352	TRF	Tandem_Repeat	318846	318890	90	+	.	.
scaffold35230	subtractBed	intrn	7243	7376	.	+	.	Parent=CGI_10001437;
	scaffold35230	TRF	Tandem_Repeat	7243	7376	85	+	.	.
scaffold35230	subtractBed	intrn	7633	7725	.	+	.	Parent=CGI_10001437;
	scaffold35230	TRF	Tandem_Repeat	7633	7725	84	+	.	.
scaffold35230	subtractBed	intrn	11648	11903	.	+	.	Parent=CGI_10001437;
	scaffold35230	TRF	Tandem_Repeat	11648	11903	431	+	.	.
scaffold35266	subtractBed	intrn	9418	9720	.	+	.	Parent=CGI_10001434;
	scaffold35266	WUBlastX	LTR_Copia	9418	9720	105	+	.	.
scaffold35266	subtractBed	intrn	11224	11424	.	+	.	Parent=CGI_10001434;
	scaffold35266	WUBlastX	LTR_Copia	11224	11424	88	-	.	.
scaffold35266	subtractBed	intrn	11769	12287	.	+	.	Parent=CGI_10001434;
	scaffold35266	WUBlastX	LTR_Copia	11769	12287	25	-	.	.
scaffold35266	subtractBed	intrn	11224	12036	.	+	.	Parent=CGI_10001434;
	scaffold35266	WUBlastX	LTR_Copia	11224	12036	71	-	.	.
scaffold35266	subtractBed	intrn	14577	14641	.	+	.	Parent=CGI_10001434;
	scaffold35266	TRF	Tandem_Repeat	14577	14641	130	+	.	.
scaffold35286	subtractBed	intrn	1429	1505	.	+	.	Parent=CGI_10001449;
	scaffold35286	TRF	Tandem_Repeat	1429	1505	50	+	.	.
scaffold35286	subtractBed	intrn	7502	7795	.	+	.	Parent=CGI_10001451;
	scaffold35286	WUBlastX	LINE_L2	7502	7795	96	+	.	.
scaffold35286	subtractBed	intrn	6299	7750	.	+	.	Parent=CGI_10001451;
	scaffold35286	WUBlastX	LINE_Proto2	6299	7750	158	+	.	.
scaffold35286	subtractBed	intrn	15930	16073	.	+	.	Parent=CGI_10001451;
	scaffold35286	TRF	Tandem_Repeat	15930	16073	288	+	.	.
scaffold35286	subtractBed	intrn	16392	16449	.	+	.	Parent=CGI_10001451;
	scaffold35286	TRF	Tandem_Repeat	16392	16449	75	+	.	.
scaffold35336	subtractBed	intrn	2592	3376	.	-	.	Parent=CGI_10001479;
	scaffold35336	TRF	Tandem_Repeat	2592	3376	974	+	.	.
scaffold35336	subtractBed	intrn	4417	4448	.	-	.	Parent=CGI_10001479;
	scaffold35336	TRF	Tandem_Repeat	4417	4448	64	+	.	.
scaffold35336	subtractBed	intrn	5616	6371	.	-	.	Parent=CGI_10001479;
	scaffold35336	WUBlastX	DNA_En-Spm	5616	7898	1261	+	.	.
scaffold35336	subtractBed	intrn	8734	9189	.	-	.	Parent=CGI_10001479;
	scaffold35336	WUBlastX	DNA_IS4EU	8734	9189	119	-	.	.
scaffold35336	subtractBed	intrn	8734	9048	.	-	.	Parent=CGI_10001479;
	scaffold35336	WUBlastX	DNA_IS4EU	8734	9048	152	-	.	.
scaffold35346	subtractBed	intrn	7568	8125	.	-	.	Parent=CGI_10001477;
	scaffold35346	WUBlastX	LTR_Gypsy	7568	8125	345	+	.	.
scaffold35346	subtractBed	intrn	8115	8270	.	-	.	Parent=CGI_10001477;
	scaffold35346	WUBlastX	LTR_Gypsy	8115	8270	111	+	.	.
scaffold354	subtractBed	intrn	48741	48845	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LTR_Gypsy	48741	48845	21	+	.	.
scaffold354	subtractBed	intrn	55714	55740	.	-	.	Parent=CGI_10025696;
	scaffold354	TRF	Tandem_Repeat	55714	55740	54	+	.	.
scaffold354	subtractBed	intrn	49636	51252	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LTR_DIRS	49636	51252	773	+	.	.
scaffold354	subtractBed	intrn	48801	49511	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LTR_DIRS	48801	49511	134	+	.	.
scaffold354	subtractBed	intrn	70926	70988	.	-	.	Parent=CGI_10025696;
	scaffold354	TRF	Tandem_Repeat	70926	70988	126	+	.	.
scaffold354	subtractBed	intrn	72809	73513	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LINE_RTE-X	72809	73513	35	+	.	.
scaffold354	subtractBed	intrn	72893	73009	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LINE_RTE-X	72893	73009	35	+	.	.
scaffold354	subtractBed	intrn	73262	73519	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LINE_RTE-X	73262	73519	38	+	.	.
scaffold354	subtractBed	intrn	73256	73615	.	-	.	Parent=CGI_10025696;
	scaffold354	WUBlastX	LINE_RTE-X	73256	73615	26	+	.	.
scaffold354	subtractBed	intrn	98471	98504	.	-	.	Parent=CGI_10025697;
	scaffold354	TRF	Tandem_Repeat	98471	98504	68	+	.	.
scaffold354	subtractBed	intrn	128759	128871	.	+	.	Parent=CGI_10025699;
	scaffold354	TRF	Tandem_Repeat	128759	128871	138	+	.	.
scaffold354	subtractBed	intrn	128948	129102	.	+	.	Parent=CGI_10025699;
	scaffold354	TRF	Tandem_Repeat	128948	129102	136	+	.	.
scaffold354	subtractBed	intrn	128298	128726	.	+	.	Parent=CGI_10025699;
	scaffold354	WUBlastX	LINE_Penelope	128298	128726	76	-	.	.
scaffold354	subtractBed	intrn	129611	129712	.	+	.	Parent=CGI_10025699;
	scaffold354	WUBlastX	LINE_Penelope	129611	129712	24	-	.	.
scaffold354	subtractBed	intrn	140831	141037	.	-	.	Parent=CGI_10025700;
	scaffold354	WUBlastX	LTR_Ngaro	140831	141037	100	+	.	.
scaffold354	subtractBed	intrn	141037	141276	.	-	.	Parent=CGI_10025700;
	scaffold354	WUBlastX	LTR_Ngaro	141037	141276	109	+	.	.
scaffold354	subtractBed	intrn	140831	141037	.	+	.	Parent=CGI_10025701;
	scaffold354	WUBlastX	LTR_Ngaro	140831	141037	100	+	.	.
scaffold354	subtractBed	intrn	141037	141276	.	+	.	Parent=CGI_10025701;
	scaffold354	WUBlastX	LTR_Ngaro	141037	141276	109	+	.	.
scaffold354	subtractBed	intrn	268020	268067	.	+	.	Parent=CGI_10025710;
	scaffold354	TRF	Tandem_Repeat	268020	268067	80	+	.	.
scaffold354	subtractBed	intrn	311403	311460	.	+	.	Parent=CGI_10025713;
	scaffold354	TRF	Tandem_Repeat	311403	311460	116	+	.	.
scaffold354	subtractBed	intrn	354060	354958	.	+	.	Parent=CGI_10025717;
	scaffold354	TRF	Tandem_Repeat	354060	354958	1604	+	.	.
scaffold354	subtractBed	intrn	489194	489385	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	489194	489385	45	-	.	.
scaffold354	subtractBed	intrn	489388	490545	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	489388	490545	38	-	.	.
scaffold354	subtractBed	intrn	488456	488821	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	488456	488821	99	-	.	.
scaffold354	subtractBed	intrn	488456	488923	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	488456	488923	76	-	.	.
scaffold354	subtractBed	intrn	489868	490329	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	489868	490329	119	-	.	.
scaffold354	subtractBed	intrn	489301	490191	.	-	.	Parent=CGI_10025720;
	scaffold354	WUBlastX	LINE_L2	489301	490191	259	-	.	.
scaffold354	subtractBed	intrn	576184	577255	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	576184	577255	1454	+	.	.
scaffold354	subtractBed	intrn	578886	578943	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	578886	578943	91	+	.	.
scaffold354	subtractBed	intrn	578886	578935	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	578886	578935	64	+	.	.
scaffold354	subtractBed	intrn	578889	578942	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	578889	578942	56	+	.	.
scaffold354	subtractBed	intrn	580340	580411	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	580340	580411	76	+	.	.
scaffold354	subtractBed	intrn	585788	585829	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	585788	585829	84	+	.	.
scaffold354	subtractBed	intrn	589783	589969	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	589783	589969	92	+	.	.
scaffold354	subtractBed	intrn	589762	589969	.	-	.	Parent=CGI_10025727;
	scaffold354	TRF	Tandem_Repeat	589762	589969	154	+	.	.
scaffold354	subtractBed	intrn	598757	598805	.	-	.	Parent=CGI_10025728;
	scaffold354	TRF	Tandem_Repeat	598757	598805	71	+	.	.
scaffold354	subtractBed	intrn	691880	692057	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	691880	692057	71	+	.	.
scaffold354	subtractBed	intrn	692714	692749	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	692714	692749	72	+	.	.
scaffold354	subtractBed	intrn	692913	692949	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	692913	692949	74	+	.	.
scaffold354	subtractBed	intrn	693147	693194	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	693147	693194	96	+	.	.
scaffold354	subtractBed	intrn	693306	693358	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	693306	693358	97	+	.	.
scaffold354	subtractBed	intrn	694405	694582	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	694405	694582	89	+	.	.
scaffold354	subtractBed	intrn	700217	700253	.	+	.	Parent=CGI_10025734;
	scaffold354	TRF	Tandem_Repeat	700217	700253	74	+	.	.
scaffold354	subtractBed	intrn	697802	697942	.	+	.	Parent=CGI_10025734;
	scaffold354	WUBlastX	LINE_RTE-BovB	697802	697942	27	-	.	.
scaffold354	subtractBed	intrn	697920	698126	.	+	.	Parent=CGI_10025734;
	scaffold354	WUBlastX	LINE_RTE-BovB	697920	698126	24	-	.	.
scaffold354	subtractBed	intrn	781515	781547	.	-	.	Parent=CGI_10025736;
	scaffold354	TRF	Tandem_Repeat	781515	781547	66	+	.	.
scaffold354	subtractBed	intrn	781515	781547	.	+	.	Parent=CGI_10025737;
	scaffold354	TRF	Tandem_Repeat	781515	781547	66	+	.	.
scaffold354	subtractBed	intrn	791358	792068	.	-	.	Parent=CGI_10025738;
	scaffold354	WUBlastX	DNA_TcMar-Tc1	791358	792068	313	-	.	.
scaffold354	subtractBed	intrn	792092	792187	.	-	.	Parent=CGI_10025738;
	scaffold354	WUBlastX	DNA_TcMar-Tc1	792092	792187	33	-	.	.
scaffold354	subtractBed	intrn	835953	835980	.	+	.	Parent=CGI_10025744;
	scaffold354	TRF	Tandem_Repeat	835953	835980	56	+	.	.
scaffold354	subtractBed	intrn	1076053	1076104	.	-	.	Parent=CGI_10025747;
	scaffold354	TRF	Tandem_Repeat	1076053	1076104	104	+	.	.
scaffold35406	subtractBed	intrn	2908	3004	.	-	.	Parent=CGI_10001499;
	scaffold35406	TRF	Tandem_Repeat	2908	3004	142	+	.	.
scaffold35406	subtractBed	intrn	9833	10459	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	LTR_Gypsy	9833	10459	58	-	.	.
scaffold35406	subtractBed	intrn	9965	10636	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	LTR_Gypsy	9965	10636	112	-	.	.
scaffold35406	subtractBed	intrn	13297	13353	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	RC_Helitron	13297	13353	24	+	.	.
scaffold35406	subtractBed	intrn	13388	14164	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	RC_Helitron	13388	14164	129	+	.	.
scaffold35406	subtractBed	intrn	9065	9145	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	LTR_Gypsy-Cigr	9065	9145	25	-	.	.
scaffold35406	subtractBed	intrn	14003	14485	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	RC_Helitron	14003	14485	144	+	.	.
scaffold35406	subtractBed	intrn	16740	17912	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	DNA_P	16740	17912	239	-	.	.
scaffold35406	subtractBed	intrn	17929	18162	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	DNA_P	17929	18162	54	-	.	.
scaffold35406	subtractBed	intrn	16155	16388	.	-	.	Parent=CGI_10001499;
	scaffold35406	WUBlastX	LINE_Jockey	16155	16388	43	+	.	.
scaffold35432	subtractBed	intrn	2400	2450	.	+	.	Parent=CGI_10001516;
	scaffold35432	TRF	Tandem_Repeat	2400	2450	102	+	.	.
scaffold35438	subtractBed	intrn	4907	4965	.	-	.	Parent=CGI_10001514;
	scaffold35438	TRF	Tandem_Repeat	4907	4965	118	+	.	.
scaffold35438	subtractBed	intrn	9886	10398	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	9886	10398	62	-	.	.
scaffold35438	subtractBed	intrn	11301	11948	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	11301	11948	244	-	.	.
scaffold35438	subtractBed	intrn	12025	12810	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	12025	12810	187	-	.	.
scaffold35438	subtractBed	intrn	9529	10494	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	9529	10494	52	-	.	.
scaffold35438	subtractBed	intrn	11535	12023	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1	11535	12023	46	-	.	.
scaffold35438	subtractBed	intrn	10027	10398	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	10027	10398	62	-	.	.
scaffold35438	subtractBed	intrn	10403	11299	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1	10403	11299	322	-	.	.
scaffold35438	subtractBed	intrn	9293	9460	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1	9293	9460	20	-	.	.
scaffold35438	subtractBed	intrn	15326	15353	.	-	.	Parent=CGI_10001514;
	scaffold35438	TRF	Tandem_Repeat	15326	15353	56	+	.	.
scaffold35438	subtractBed	intrn	13738	14004	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_L1-Tx1	13738	14004	112	-	.	.
scaffold35438	subtractBed	intrn	14442	14678	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	DNA_MuDR	14442	14678	78	-	.	.
scaffold35438	subtractBed	intrn	13545	13721	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	LINE_CR1	13545	13721	61	-	.	.
scaffold35438	subtractBed	intrn	14851	15249	.	-	.	Parent=CGI_10001514;
	scaffold35438	WUBlastX	DNA_MuDR	14851	15249	47	-	.	.
scaffold35438	subtractBed	intrn	17362	17398	.	-	.	Parent=CGI_10001514;
	scaffold35438	TRF	Tandem_Repeat	17362	17398	74	+	.	.
scaffold35444	subtractBed	intrn	1987	2109	.	-	.	Parent=CGI_10001555;
	scaffold35444	TRF	Tandem_Repeat	1987	2109	176	+	.	.
scaffold35444	subtractBed	intrn	5335	5371	.	-	.	Parent=CGI_10001555;
	scaffold35444	TRF	Tandem_Repeat	5335	5371	56	+	.	.
scaffold35444	subtractBed	intrn	5770	5931	.	-	.	Parent=CGI_10001555;
	scaffold35444	WUBlastX	LTR_Gypsy-Cigr	5770	5931	57	-	.	.
scaffold35444	subtractBed	intrn	5940	6185	.	-	.	Parent=CGI_10001555;
	scaffold35444	WUBlastX	LTR_Gypsy	5940	6185	53	-	.	.
scaffold35444	subtractBed	intrn	5925	6095	.	-	.	Parent=CGI_10001555;
	scaffold35444	WUBlastX	LTR_Gypsy-Cigr	5925	6095	63	-	.	.
scaffold35444	subtractBed	intrn	6125	6250	.	-	.	Parent=CGI_10001555;
	scaffold35444	WUBlastX	LTR_Gypsy	6125	6250	40	-	.	.
scaffold35444	subtractBed	intrn	5725	5934	.	-	.	Parent=CGI_10001555;
	scaffold35444	WUBlastX	LTR_Gypsy	5725	5934	41	-	.	.
scaffold35444	subtractBed	intrn	8265	8342	.	-	.	Parent=CGI_10001556;
	scaffold35444	TRF	Tandem_Repeat	8265	8342	147	+	.	.
scaffold35444	subtractBed	intrn	9718	9770	.	-	.	Parent=CGI_10001556;
	scaffold35444	TRF	Tandem_Repeat	9718	9770	52	+	.	.
scaffold35446	subtractBed	intrn	17885	18118	.	+	.	Parent=CGI_10001510;
	scaffold35446	WUBlastX	LTR_Gypsy	17885	18118	76	-	.	.
scaffold35446	subtractBed	intrn	18228	18668	.	+	.	Parent=CGI_10001510;
	scaffold35446	WUBlastX	LTR_Gypsy	18228	18668	266	-	.	.
scaffold35446	subtractBed	intrn	18141	18650	.	+	.	Parent=CGI_10001510;
	scaffold35446	WUBlastX	LTR_ERV1	18141	18650	57	-	.	.
scaffold35446	subtractBed	intrn	18267	18758	.	+	.	Parent=CGI_10001510;
	scaffold35446	WUBlastX	LTR_Gypsy	18267	18758	97	-	.	.
scaffold35446	subtractBed	intrn	17655	17729	.	+	.	Parent=CGI_10001510;
	scaffold35446	WUBlastX	LTR_Gypsy	17655	17729	24	-	.	.
scaffold35478	subtractBed	intrn	9057	9092	.	-	.	Parent=CGI_10001535;
	scaffold35478	TRF	Tandem_Repeat	9057	9092	72	+	.	.
scaffold35478	subtractBed	intrn	9653	10273	.	-	.	Parent=CGI_10001535;
	scaffold35478	WUBlastX	DNA_Crypton	9653	10273	56	+	.	.
scaffold35478	subtractBed	intrn	10646	10987	.	-	.	Parent=CGI_10001535;
	scaffold35478	WUBlastX	DNA_Crypton	10646	10987	69	+	.	.
scaffold35486	subtractBed	intrn	15426	16019	.	-	.	Parent=CGI_10001528;
	scaffold35486	WUBlastX	LINE_RTE-X	15426	16019	110	-	.	.
scaffold35486	subtractBed	intrn	16281	16514	.	-	.	Parent=CGI_10001528;
	scaffold35486	WUBlastX	LINE_CR1-L2	16281	16514	37	-	.	.
scaffold35538	subtractBed	intrn	14483	14869	.	+	.	Parent=CGI_10001559;
	scaffold35538	TRF	Tandem_Repeat	14483	14869	489	+	.	.
scaffold35538	subtractBed	intrn	21118	21119	.	+	.	Parent=CGI_10001559;
	scaffold35538	WUBlastX	LINE_RTE-X	21118	21330	54	-	.	.
scaffold35538	subtractBed	intrn	20932	21119	.	+	.	Parent=CGI_10001559;
	scaffold35538	WUBlastX	LINE_RTE-X	20932	21357	20	-	.	.
scaffold35538	subtractBed	intrn	21157	21330	.	+	.	Parent=CGI_10001559;
	scaffold35538	WUBlastX	LINE_RTE-X	21118	21330	54	-	.	.
scaffold35538	subtractBed	intrn	21157	21357	.	+	.	Parent=CGI_10001559;
	scaffold35538	WUBlastX	LINE_RTE-X	20932	21357	20	-	.	.
scaffold35640	subtractBed	intrn	1611	2025	.	-	.	Parent=CGI_10001574;
	scaffold35640	TRF	Tandem_Repeat	1611	2025	618	+	.	.
scaffold35712	subtractBed	intrn	8360	8398	.	+	.	Parent=CGI_10001589;
	scaffold35712	TRF	Tandem_Repeat	8360	8398	78	+	.	.
scaffold35712	subtractBed	intrn	6532	7506	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	6532	7506	278	+	.	.
scaffold35712	subtractBed	intrn	6080	6178	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_Proto2	6080	6178	21	+	.	.
scaffold35712	subtractBed	intrn	5642	6160	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	5642	6160	99	+	.	.
scaffold35712	subtractBed	intrn	6243	6764	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	6243	6764	187	+	.	.
scaffold35712	subtractBed	intrn	7765	7827	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_Jockey	7765	7827	22	+	.	.
scaffold35712	subtractBed	intrn	5777	6160	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	5777	6160	144	+	.	.
scaffold35712	subtractBed	intrn	6754	7506	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	6754	7506	358	+	.	.
scaffold35712	subtractBed	intrn	6754	7686	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_RTE-X	6754	7686	315	+	.	.
scaffold35712	subtractBed	intrn	8249	8287	.	+	.	Parent=CGI_10001589;
	scaffold35712	WUBlastX	LINE_L1	8249	8287	22	+	.	.
scaffold35712	subtractBed	intrn	22289	22341	.	+	.	Parent=CGI_10001589;
	scaffold35712	TRF	Tandem_Repeat	22289	22341	97	+	.	.
scaffold35712	subtractBed	intrn	22289	22344	.	+	.	Parent=CGI_10001589;
	scaffold35712	TRF	Tandem_Repeat	22289	22344	67	+	.	.
scaffold358	subtractBed	intrn	9689	9762	.	-	.	Parent=CGI_10013016;
	scaffold358	TRF	Tandem_Repeat	9689	9762	82	+	.	.
scaffold358	subtractBed	intrn	132311	132400	.	-	.	Parent=CGI_10013024;
	scaffold358	TRF	Tandem_Repeat	132311	132400	94	+	.	.
scaffold358	subtractBed	intrn	133329	134180	.	-	.	Parent=CGI_10013024;
	scaffold358	TRF	Tandem_Repeat	133329	134180	780	+	.	.
scaffold358	subtractBed	intrn	133329	134180	.	-	.	Parent=CGI_10013024;
	scaffold358	TRF	Tandem_Repeat	133329	134180	665	+	.	.
scaffold358	subtractBed	intrn	133479	134180	.	-	.	Parent=CGI_10013024;
	scaffold358	TRF	Tandem_Repeat	133479	134180	771	+	.	.
scaffold358	subtractBed	intrn	137155	137307	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	137155	137307	68	+	.	.
scaffold358	subtractBed	intrn	137534	137722	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	137534	137722	24	+	.	.
scaffold358	subtractBed	intrn	136562	136663	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	136562	136663	24	+	.	.
scaffold358	subtractBed	intrn	137549	137704	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	137549	137704	40	+	.	.
scaffold358	subtractBed	intrn	137158	137346	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	137158	137346	37	+	.	.
scaffold358	subtractBed	intrn	137370	137531	.	-	.	Parent=CGI_10013024;
	scaffold358	WUBlastX	LINE_RTE-X	137370	137531	55	+	.	.
scaffold358	subtractBed	intrn	179973	180042	.	+	.	Parent=CGI_10013027;
	scaffold358	TRF	Tandem_Repeat	179973	180042	131	+	.	.
scaffold358	subtractBed	intrn	186347	186430	.	+	.	Parent=CGI_10013027;
	scaffold358	TRF	Tandem_Repeat	186347	186430	159	+	.	.
scaffold358	subtractBed	intrn	187560	188308	.	+	.	Parent=CGI_10013027;
	scaffold358	TRF	Tandem_Repeat	187560	188308	826	+	.	.
scaffold358	subtractBed	intrn	187560	188308	.	+	.	Parent=CGI_10013027;
	scaffold358	TRF	Tandem_Repeat	187560	188308	843	+	.	.
scaffold358	subtractBed	intrn	291926	292276	.	-	.	Parent=CGI_10013031;
	scaffold358	TRF	Tandem_Repeat	291926	292276	524	+	.	.
scaffold35822	subtractBed	intrn	3264	3371	.	-	.	Parent=CGI_10001612;
	scaffold35822	TRF	Tandem_Repeat	3264	3371	189	+	.	.
scaffold35822	subtractBed	intrn	11711	11803	.	-	.	Parent=CGI_10001612;
	scaffold35822	TRF	Tandem_Repeat	11711	11803	78	+	.	.
scaffold35822	subtractBed	intrn	23437	23563	.	-	.	Parent=CGI_10001614;
	scaffold35822	TRF	Tandem_Repeat	23437	23563	87	+	.	.
scaffold35822	subtractBed	intrn	23692	24537	.	-	.	Parent=CGI_10001614;
	scaffold35822	WUBlastX	LINE_RTE-BovB	23692	24537	636	+	.	.
scaffold35854	subtractBed	intrn	5579	5710	.	-	.	Parent=CGI_10001636;
	scaffold35854	TRF	Tandem_Repeat	5579	5710	120	+	.	.
scaffold35866	subtractBed	intrn	14203	14447	.	+	.	Parent=CGI_10001635;
	scaffold35866	TRF	Tandem_Repeat	14192	14447	314	+	.	.
scaffold35866	subtractBed	intrn	15267	15450	.	+	.	Parent=CGI_10001635;
	scaffold35866	TRF	Tandem_Repeat	15267	15450	304	+	.	.
scaffold35866	subtractBed	intrn	15267	15450	.	+	.	Parent=CGI_10001635;
	scaffold35866	TRF	Tandem_Repeat	15267	15450	300	+	.	.
scaffold35866	subtractBed	intrn	16400	16595	.	+	.	Parent=CGI_10001635;
	scaffold35866	TRF	Tandem_Repeat	16400	16595	293	+	.	.
scaffold35866	subtractBed	intrn	16400	16601	.	+	.	Parent=CGI_10001635;
	scaffold35866	TRF	Tandem_Repeat	16400	16601	304	+	.	.
scaffold35884	subtractBed	intrn	22005	22039	.	-	.	Parent=CGI_10001638;
	scaffold35884	TRF	Tandem_Repeat	22005	22039	52	+	.	.
scaffold35884	subtractBed	intrn	22244	22395	.	-	.	Parent=CGI_10001638;
	scaffold35884	TRF	Tandem_Repeat	22244	22395	93	+	.	.
scaffold35884	subtractBed	intrn	22264	22398	.	-	.	Parent=CGI_10001638;
	scaffold35884	TRF	Tandem_Repeat	22264	22398	150	+	.	.
scaffold35884	subtractBed	intrn	27007	27850	.	-	.	Parent=CGI_10001638;
	scaffold35884	TRF	Tandem_Repeat	27007	27850	1283	+	.	.
scaffold35896	subtractBed	intrn	9402	9929	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	DNA_TcMar-Tc1	9402	9929	154	+	.	.
scaffold35896	subtractBed	intrn	10072	10335	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	DNA_TcMar-Tc1	10072	10335	111	+	.	.
scaffold35896	subtractBed	intrn	9932	10150	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	DNA_TcMar-Tc1	9932	10150	94	+	.	.
scaffold35896	subtractBed	intrn	15398	15449	.	-	.	Parent=CGI_10001642;
	scaffold35896	TRF	Tandem_Repeat	15398	15449	61	+	.	.
scaffold35896	subtractBed	intrn	15411	15450	.	-	.	Parent=CGI_10001642;
	scaffold35896	TRF	Tandem_Repeat	15411	15450	64	+	.	.
scaffold35896	subtractBed	intrn	20487	20642	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	LINE_RTE-BovB	20487	20642	29	-	.	.
scaffold35896	subtractBed	intrn	26002	26052	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	LINE_L1	26002	26052	24	-	.	.
scaffold35896	subtractBed	intrn	25839	26030	.	-	.	Parent=CGI_10001642;
	scaffold35896	WUBlastX	LINE_L2	25839	26030	21	-	.	.
scaffold35902	subtractBed	intrn	7974	8032	.	-	.	Parent=CGI_10001651;
	scaffold35902	TRF	Tandem_Repeat	7974	8032	118	+	.	.
scaffold35902	subtractBed	intrn	27520	28107	.	-	.	Parent=CGI_10001652;
	scaffold35902	WUBlastX	LINE_L1	27520	28107	310	+	.	.
scaffold35902	subtractBed	intrn	27589	28083	.	-	.	Parent=CGI_10001652;
	scaffold35902	WUBlastX	LINE_L1-Tx1	27589	28083	422	+	.	.
scaffold35960	subtractBed	intrn	7779	8213	.	-	.	Parent=CGI_10001702;
	scaffold35960	TRF	Tandem_Repeat	7779	8213	288	+	.	.
scaffold35960	subtractBed	intrn	8214	8496	.	-	.	Parent=CGI_10001702;
	scaffold35960	TRF	Tandem_Repeat	8214	8496	186	+	.	.
scaffold35960	subtractBed	intrn	11204	11455	.	-	.	Parent=CGI_10001702;
	scaffold35960	WUBlastX	DNA_hAT-Tip100	11204	11455	35	+	.	.
scaffold35960	subtractBed	intrn	9519	9713	.	-	.	Parent=CGI_10001702;
	scaffold35960	WUBlastX	DNA_hAT-Tip100	9519	9713	86	+	.	.
scaffold35960	subtractBed	intrn	11219	11398	.	-	.	Parent=CGI_10001702;
	scaffold35960	WUBlastX	DNA_hAT-Tip100	11219	11398	83	+	.	.
scaffold35970	subtractBed	intrn	14901	14930	.	+	.	Parent=CGI_10001699;
	scaffold35970	TRF	Tandem_Repeat	14901	14930	60	+	.	.
scaffold35970	subtractBed	intrn	16428	16480	.	+	.	Parent=CGI_10001699;
	scaffold35970	TRF	Tandem_Repeat	16428	16480	106	+	.	.
scaffold35974	subtractBed	intrn	29222	29340	.	-	.	Parent=CGI_10001705;
	scaffold35974	TRF	Tandem_Repeat	29222	29340	69	+	.	.
scaffold35974	subtractBed	intrn	29218	29342	.	-	.	Parent=CGI_10001705;
	scaffold35974	TRF	Tandem_Repeat	29218	29342	114	+	.	.
scaffold35986	subtractBed	intrn	12602	12833	.	+	.	Parent=CGI_10001706;
	scaffold35986	TRF	Tandem_Repeat	12602	12833	136	+	.	.
scaffold35986	subtractBed	intrn	12984	13121	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_Gypsy	12984	13121	95	+	.	.
scaffold35986	subtractBed	intrn	13122	13367	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	13122	13367	141	-	.	.
scaffold35986	subtractBed	intrn	13328	13573	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	13328	13573	68	-	.	.
scaffold35986	subtractBed	intrn	13627	13716	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	13627	13716	31	-	.	.
scaffold35986	subtractBed	intrn	14383	14598	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	14383	14598	42	-	.	.
scaffold35986	subtractBed	intrn	14583	15041	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	14583	15041	104	-	.	.
scaffold35986	subtractBed	intrn	14598	15137	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	14598	15137	24	-	.	.
scaffold35986	subtractBed	intrn	15978	16415	.	+	.	Parent=CGI_10001706;
	scaffold35986	WUBlastX	LTR_DIRS	15978	16415	57	-	.	.
scaffold35988	subtractBed	intrn	26179	26325	.	-	.	Parent=CGI_10001701;
	scaffold35988	WUBlastX	DNA_Maverick	26179	26325	66	-	.	.
scaffold35994	subtractBed	intrn	3543	3797	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_Maverick	3543	3797	20	-	.	.
scaffold35994	subtractBed	intrn	3803	3835	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_Maverick	3803	4312	26	-	.	.
scaffold35994	subtractBed	intrn	3859	4312	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_Maverick	3803	4312	26	-	.	.
scaffold35994	subtractBed	intrn	11907	12422	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_PiggyBac	11907	12422	128	-	.	.
scaffold35994	subtractBed	intrn	12413	12562	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_PiggyBac	12413	12562	42	-	.	.
scaffold35994	subtractBed	intrn	12559	12915	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_PiggyBac	12559	12915	248	-	.	.
scaffold35994	subtractBed	intrn	9739	10764	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	LINE_Penelope	9739	10764	116	+	.	.
scaffold35994	subtractBed	intrn	9943	10767	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	LINE_Penelope	9943	10767	326	+	.	.
scaffold35994	subtractBed	intrn	10754	11227	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	LINE_Penelope	10754	11227	224	+	.	.
scaffold35994	subtractBed	intrn	11250	11513	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	LINE_Penelope	11250	11513	158	+	.	.
scaffold35994	subtractBed	intrn	12478	12960	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	DNA_PiggyBac	12478	12960	150	-	.	.
scaffold35994	subtractBed	intrn	11220	11702	.	+	.	Parent=CGI_10001674;
	scaffold35994	WUBlastX	LINE_Penelope	11220	11702	144	+	.	.
scaffold35994	subtractBed	intrn	23927	24322	.	+	.	Parent=CGI_10001675;
	scaffold35994	WUBlastX	LTR_Gypsy	23927	24322	192	+	.	.
scaffold35994	subtractBed	intrn	23659	23940	.	+	.	Parent=CGI_10001675;
	scaffold35994	WUBlastX	LTR_Gypsy	23659	23940	122	+	.	.
scaffold35994	subtractBed	intrn	22897	23361	.	+	.	Parent=CGI_10001675;
	scaffold35994	WUBlastX	LTR_Pao	22897	23361	140	-	.	.
scaffold35994	subtractBed	intrn	23930	24220	.	+	.	Parent=CGI_10001675;
	scaffold35994	WUBlastX	LTR_Gypsy	23930	24220	197	+	.	.
scaffold36	subtractBed	intrn	5546	6976	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	5546	6976	408	+	.	.
scaffold36	subtractBed	intrn	7095	7286	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	DNA_NOF	7095	7286	47	+	.	.
scaffold36	subtractBed	intrn	3719	5191	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	3719	5191	1108	+	.	.
scaffold36	subtractBed	intrn	3743	6757	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	3743	6757	796	+	.	.
scaffold36	subtractBed	intrn	2924	3160	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	2924	3160	49	+	.	.
scaffold36	subtractBed	intrn	2870	3133	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	2870	3133	42	+	.	.
scaffold36	subtractBed	intrn	7161	7292	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Pao	7161	7292	50	+	.	.
scaffold36	subtractBed	intrn	2969	3130	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	2969	3130	61	+	.	.
scaffold36	subtractBed	intrn	2996	5128	.	+	.	Parent=CGI_10001028;
	scaffold36	WUBlastX	LTR_Gypsy	2996	5128	1016	+	.	.
scaffold36022	subtractBed	intrn	24492	24632	.	-	.	Parent=CGI_10001741;
	scaffold36022	WUBlastX	LINE_RTE-X	24492	24632	58	+	.	.
scaffold36092	subtractBed	intrn	4151	4191	.	+	.	Parent=CGI_10001746;
	scaffold36092	TRF	Tandem_Repeat	4151	4191	82	+	.	.
scaffold36092	subtractBed	intrn	13104	13570	.	+	.	Parent=CGI_10001746;
	scaffold36092	TRF	Tandem_Repeat	13104	13570	544	+	.	.
scaffold361	subtractBed	intrn	16328	16354	.	-	.	Parent=CGI_10020842;
	scaffold361	TRF	Tandem_Repeat	16328	16354	54	+	.	.
scaffold361	subtractBed	intrn	113284	113328	.	-	.	Parent=CGI_10020845;
	scaffold361	TRF	Tandem_Repeat	113284	113328	90	+	.	.
scaffold361	subtractBed	intrn	128699	128724	.	-	.	Parent=CGI_10020845;
	scaffold361	TRF	Tandem_Repeat	128699	128724	52	+	.	.
scaffold361	subtractBed	intrn	162212	162403	.	-	.	Parent=CGI_10020846;
	scaffold361	WUBlastX	LINE_L1-Tx1	162212	162403	45	+	.	.
scaffold361	subtractBed	intrn	167631	167872	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	167631	167872	213	+	.	.
scaffold361	subtractBed	intrn	168098	168254	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	168098	168254	107	+	.	.
scaffold361	subtractBed	intrn	172119	172836	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	172119	172836	900	+	.	.
scaffold361	subtractBed	intrn	172119	172907	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	172119	172907	519	+	.	.
scaffold361	subtractBed	intrn	174391	174974	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	174391	174974	719	+	.	.
scaffold361	subtractBed	intrn	177225	177378	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	177225	177378	227	+	.	.
scaffold361	subtractBed	intrn	178867	179104	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	178867	179104	377	+	.	.
scaffold361	subtractBed	intrn	179421	180769	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	179421	180769	2078	+	.	.
scaffold361	subtractBed	intrn	183523	183764	.	+	.	Parent=CGI_10020847;
	scaffold361	TRF	Tandem_Repeat	183523	183764	358	+	.	.
scaffold361	subtractBed	intrn	195056	195970	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	195056	195970	572	+	.	.
scaffold361	subtractBed	intrn	195056	195967	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	195056	195967	667	+	.	.
scaffold361	subtractBed	intrn	197547	197591	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	197547	197591	90	+	.	.
scaffold361	subtractBed	intrn	200634	200825	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	200634	200825	278	+	.	.
scaffold361	subtractBed	intrn	207975	208312	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	207975	208312	595	+	.	.
scaffold361	subtractBed	intrn	215691	215741	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	215691	215741	102	+	.	.
scaffold361	subtractBed	intrn	220216	220263	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	220216	220263	87	+	.	.
scaffold361	subtractBed	intrn	221877	222106	.	-	.	Parent=CGI_10020848;
	scaffold361	TRF	Tandem_Repeat	221877	222106	140	+	.	.
scaffold361	subtractBed	intrn	197547	197591	.	+	.	Parent=CGI_10020849;
	scaffold361	TRF	Tandem_Repeat	197547	197591	90	+	.	.
scaffold361	subtractBed	intrn	200634	200825	.	+	.	Parent=CGI_10020849;
	scaffold361	TRF	Tandem_Repeat	200634	200825	278	+	.	.
scaffold361	subtractBed	intrn	207975	208312	.	+	.	Parent=CGI_10020850;
	scaffold361	TRF	Tandem_Repeat	207975	208312	595	+	.	.
scaffold361	subtractBed	intrn	240999	241129	.	-	.	Parent=CGI_10020852;
	scaffold361	TRF	Tandem_Repeat	240999	241129	69	+	.	.
scaffold361	subtractBed	intrn	243577	243775	.	-	.	Parent=CGI_10020852;
	scaffold361	TRF	Tandem_Repeat	243577	243775	308	+	.	.
scaffold361	subtractBed	intrn	245057	245519	.	-	.	Parent=CGI_10020852;
	scaffold361	TRF	Tandem_Repeat	245057	245519	784	+	.	.
scaffold361	subtractBed	intrn	251692	252027	.	+	.	Parent=CGI_10020853;
	scaffold361	TRF	Tandem_Repeat	251692	252027	405	+	.	.
scaffold361	subtractBed	intrn	251752	252915	.	+	.	Parent=CGI_10020853;
	scaffold361	TRF	Tandem_Repeat	251752	252937	1602	+	.	.
scaffold361	subtractBed	intrn	294993	295043	.	+	.	Parent=CGI_10020856;
	scaffold361	TRF	Tandem_Repeat	294993	295043	102	+	.	.
scaffold361	subtractBed	intrn	296484	296954	.	+	.	Parent=CGI_10020856;
	scaffold361	TRF	Tandem_Repeat	296484	296954	557	+	.	.
scaffold361	subtractBed	intrn	308420	308534	.	-	.	Parent=CGI_10020857;
	scaffold361	TRF	Tandem_Repeat	308420	308534	115	+	.	.
scaffold361	subtractBed	intrn	311555	311833	.	-	.	Parent=CGI_10020857;
	scaffold361	TRF	Tandem_Repeat	311555	311833	438	+	.	.
scaffold361	subtractBed	intrn	323101	323147	.	+	.	Parent=CGI_10020858;
	scaffold361	TRF	Tandem_Repeat	323101	323147	87	+	.	.
scaffold361	subtractBed	intrn	325059	325532	.	+	.	Parent=CGI_10020858;
	scaffold361	TRF	Tandem_Repeat	325059	325532	772	+	.	.
scaffold361	subtractBed	intrn	325059	325532	.	-	.	Parent=CGI_10020859;
	scaffold361	TRF	Tandem_Repeat	325059	325532	772	+	.	.
scaffold361	subtractBed	intrn	333925	334642	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	333925	334642	1182	+	.	.
scaffold361	subtractBed	intrn	337116	337446	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	337116	337446	581	+	.	.
scaffold361	subtractBed	intrn	340738	341005	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	340738	341005	410	+	.	.
scaffold361	subtractBed	intrn	342183	342925	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	342183	342925	721	+	.	.
scaffold361	subtractBed	intrn	343427	343792	.	-	.	Parent=CGI_10020861;
	scaffold361	WUBlastX	LINE_Penelope	343427	343792	143	-	.	.
scaffold361	subtractBed	intrn	345726	346522	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	345726	346522	1427	+	.	.
scaffold361	subtractBed	intrn	350693	350745	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	350693	350745	63	+	.	.
scaffold361	subtractBed	intrn	350690	350745	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	350690	350745	58	+	.	.
scaffold361	subtractBed	intrn	387816	388655	.	-	.	Parent=CGI_10020861;
	scaffold361	TRF	Tandem_Repeat	387816	388655	1123	+	.	.
scaffold361	subtractBed	intrn	522785	522911	.	+	.	Parent=CGI_10020867;
	scaffold361	TRF	Tandem_Repeat	522785	522911	67	+	.	.
scaffold361	subtractBed	intrn	535763	535817	.	-	.	Parent=CGI_10020869;
	scaffold361	TRF	Tandem_Repeat	535763	535817	101	+	.	.
scaffold361	subtractBed	intrn	560490	560536	.	+	.	Parent=CGI_10020870;
	scaffold361	TRF	Tandem_Repeat	560490	560536	85	+	.	.
scaffold361	subtractBed	intrn	567153	567239	.	+	.	Parent=CGI_10020870;
	scaffold361	TRF	Tandem_Repeat	567153	567252	200	+	.	.
scaffold361	subtractBed	intrn	590025	590111	.	+	.	Parent=CGI_10020870;
	scaffold361	TRF	Tandem_Repeat	590025	590111	95	+	.	.
scaffold361	subtractBed	intrn	591228	591284	.	+	.	Parent=CGI_10020870;
	scaffold361	TRF	Tandem_Repeat	591228	591284	98	+	.	.
scaffold361	subtractBed	intrn	592810	592842	.	+	.	Parent=CGI_10020870;
	scaffold361	TRF	Tandem_Repeat	592810	592842	66	+	.	.
scaffold361	subtractBed	intrn	647819	648611	.	-	.	Parent=CGI_10020874;
	scaffold361	TRF	Tandem_Repeat	647819	648611	1268	+	.	.
scaffold361	subtractBed	intrn	650673	651177	.	-	.	Parent=CGI_10020874;
	scaffold361	TRF	Tandem_Repeat	650673	651177	295	+	.	.
scaffold36108	subtractBed	intrn	4248	4281	.	+	.	Parent=CGI_10001790;
	scaffold36108	TRF	Tandem_Repeat	4248	4281	52	+	.	.
scaffold36140	subtractBed	intrn	7200	7255	.	+	.	Parent=CGI_10001795;
	scaffold36140	TRF	Tandem_Repeat	7200	7255	112	+	.	.
scaffold36140	subtractBed	intrn	10497	10558	.	+	.	Parent=CGI_10001795;
	scaffold36140	TRF	Tandem_Repeat	10497	10558	124	+	.	.
scaffold36140	subtractBed	intrn	8933	9388	.	+	.	Parent=CGI_10001795;
	scaffold36140	WUBlastX	LINE_CR1-L2	8933	9388	298	-	.	.
scaffold36140	subtractBed	intrn	10088	10237	.	+	.	Parent=CGI_10001795;
	scaffold36140	WUBlastX	LINE_CR1	10088	10237	32	-	.	.
scaffold36140	subtractBed	intrn	7974	8993	.	+	.	Parent=CGI_10001795;
	scaffold36140	WUBlastX	LINE_L2	7974	8993	546	-	.	.
scaffold36140	subtractBed	intrn	8921	9490	.	+	.	Parent=CGI_10001795;
	scaffold36140	WUBlastX	LINE_CR1	8921	9490	211	-	.	.
scaffold36158	subtractBed	intrn	18432	18671	.	+	.	Parent=CGI_10001808;
	scaffold36158	WUBlastX	LINE_L1-Tx1	18432	18671	37	-	.	.
scaffold36158	subtractBed	intrn	18489	18677	.	+	.	Parent=CGI_10001808;
	scaffold36158	WUBlastX	LINE_L1-Tx1	18489	18677	41	-	.	.
scaffold36170	subtractBed	intrn	1289	1318	.	-	.	Parent=CGI_10001816;
	scaffold36170	TRF	Tandem_Repeat	1289	1318	60	+	.	.
scaffold36190	subtractBed	intrn	7371	7399	.	-	.	Parent=CGI_10001810;
	scaffold36190	TRF	Tandem_Repeat	7371	7399	58	+	.	.
scaffold36190	subtractBed	intrn	7448	7485	.	-	.	Parent=CGI_10001810;
	scaffold36190	TRF	Tandem_Repeat	7448	7485	76	+	.	.
scaffold36190	subtractBed	intrn	20135	20239	.	+	.	Parent=CGI_10001811;
	scaffold36190	WUBlastX	DNA_Crypton	20135	20335	68	-	.	.
scaffold36202	subtractBed	intrn	20512	20757	.	+	.	Parent=CGI_10001812;
	scaffold36202	WUBlastX	LTR_Ngaro	20512	20757	26	-	.	.
scaffold36202	subtractBed	intrn	20871	21449	.	+	.	Parent=CGI_10001812;
	scaffold36202	WUBlastX	LTR_Ngaro	20871	21449	71	-	.	.
scaffold36202	subtractBed	intrn	20566	20757	.	+	.	Parent=CGI_10001812;
	scaffold36202	WUBlastX	LTR_Ngaro	20566	20757	34	-	.	.
scaffold36202	subtractBed	intrn	20871	21314	.	+	.	Parent=CGI_10001812;
	scaffold36202	WUBlastX	LTR_Ngaro	20871	21314	85	-	.	.
scaffold36202	subtractBed	intrn	20747	20965	.	+	.	Parent=CGI_10001812;
	scaffold36202	WUBlastX	LTR_Ngaro	20747	20965	49	-	.	.
scaffold36278	subtractBed	intrn	27490	28791	.	-	.	Parent=CGI_10001848;
	scaffold36278	TRF	Tandem_Repeat	27490	28791	1282	+	.	.
scaffold36278	subtractBed	intrn	29864	30798	.	-	.	Parent=CGI_10001848;
	scaffold36278	TRF	Tandem_Repeat	29864	30798	671	+	.	.
scaffold36278	subtractBed	intrn	30020	30798	.	-	.	Parent=CGI_10001848;
	scaffold36278	TRF	Tandem_Repeat	30020	30798	1215	+	.	.
scaffold36278	subtractBed	intrn	28794	29246	.	-	.	Parent=CGI_10001848;
	scaffold36278	WUBlastX	DNA_PiggyBac	28794	29246	94	-	.	.
scaffold36278	subtractBed	intrn	26785	26895	.	-	.	Parent=CGI_10001848;
	scaffold36278	WUBlastX	DNA_PiggyBac	26785	26895	20	-	.	.
scaffold36278	subtractBed	intrn	26782	26844	.	-	.	Parent=CGI_10001848;
	scaffold36278	WUBlastX	DNA_PiggyBac	26782	26844	41	-	.	.
scaffold36278	subtractBed	intrn	26207	26746	.	-	.	Parent=CGI_10001848;
	scaffold36278	WUBlastX	DNA_PiggyBac	26207	26746	127	-	.	.
scaffold36278	subtractBed	intrn	29290	29520	.	-	.	Parent=CGI_10001848;
	scaffold36278	WUBlastX	DNA_PiggyBac	29290	29520	70	-	.	.
scaffold36286	subtractBed	intrn	8801	8888	.	+	.	Parent=CGI_10001838;
	scaffold36286	TRF	Tandem_Repeat	8801	8888	88	+	.	.
scaffold36286	subtractBed	intrn	9931	10064	.	+	.	Parent=CGI_10001838;
	scaffold36286	TRF	Tandem_Repeat	9931	10064	124	+	.	.
scaffold363	subtractBed	intrn	3432	3509	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	3432	3509	70	+	.	.
scaffold363	subtractBed	intrn	6703	6748	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	6703	6748	92	+	.	.
scaffold363	subtractBed	intrn	11604	11707	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	11604	11707	75	+	.	.
scaffold363	subtractBed	intrn	11629	11728	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	11629	11728	105	+	.	.
scaffold363	subtractBed	intrn	12849	13135	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	12849	13135	369	+	.	.
scaffold363	subtractBed	intrn	13278	13312	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	13278	13312	70	+	.	.
scaffold363	subtractBed	intrn	13448	13594	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	13448	13594	159	+	.	.
scaffold363	subtractBed	intrn	13485	13642	.	+	.	Parent=CGI_10019283;
	scaffold363	TRF	Tandem_Repeat	13485	13642	183	+	.	.
scaffold363	subtractBed	intrn	6703	6748	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	6703	6748	92	+	.	.
scaffold363	subtractBed	intrn	11604	11707	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	11604	11707	75	+	.	.
scaffold363	subtractBed	intrn	11629	11728	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	11629	11728	105	+	.	.
scaffold363	subtractBed	intrn	12849	13135	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	12849	13135	369	+	.	.
scaffold363	subtractBed	intrn	13278	13312	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	13278	13312	70	+	.	.
scaffold363	subtractBed	intrn	13448	13594	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	13448	13594	159	+	.	.
scaffold363	subtractBed	intrn	13485	13642	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	13485	13642	183	+	.	.
scaffold363	subtractBed	intrn	16574	16701	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	16574	16701	184	+	.	.
scaffold363	subtractBed	intrn	19149	19253	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	19149	19253	142	+	.	.
scaffold363	subtractBed	intrn	20819	22081	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	20819	22081	1997	+	.	.
scaffold363	subtractBed	intrn	25819	26566	.	-	.	Parent=CGI_10019284;
	scaffold363	TRF	Tandem_Repeat	25819	26566	597	+	.	.
scaffold363	subtractBed	intrn	49724	49762	.	+	.	Parent=CGI_10019285;
	scaffold363	TRF	Tandem_Repeat	49724	49762	78	+	.	.
scaffold363	subtractBed	intrn	60107	60138	.	+	.	Parent=CGI_10019286;
	scaffold363	TRF	Tandem_Repeat	60107	60138	64	+	.	.
scaffold363	subtractBed	intrn	62918	62992	.	+	.	Parent=CGI_10019286;
	scaffold363	TRF	Tandem_Repeat	62918	62992	80	+	.	.
scaffold363	subtractBed	intrn	99447	99494	.	-	.	Parent=CGI_10019289;
	scaffold363	TRF	Tandem_Repeat	99447	99494	51	+	.	.
scaffold363	subtractBed	intrn	97875	98753	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Harbinger	97875	98753	595	+	.	.
scaffold363	subtractBed	intrn	105876	106233	.	-	.	Parent=CGI_10019289;
	scaffold363	TRF	Tandem_Repeat	105876	106233	469	+	.	.
scaffold363	subtractBed	intrn	105974	106032	.	-	.	Parent=CGI_10019289;
	scaffold363	TRF	Tandem_Repeat	105974	106032	50	+	.	.
scaffold363	subtractBed	intrn	106043	106179	.	-	.	Parent=CGI_10019289;
	scaffold363	TRF	Tandem_Repeat	106043	106179	103	+	.	.
scaffold363	subtractBed	intrn	109396	109980	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	109396	109980	305	-	.	.
scaffold363	subtractBed	intrn	111048	111148	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	111048	111863	388	-	.	.
scaffold363	subtractBed	intrn	109056	109295	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	109056	109295	97	-	.	.
scaffold363	subtractBed	intrn	109348	110097	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	109348	110097	172	-	.	.
scaffold363	subtractBed	intrn	110902	111057	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	110902	111057	32	-	.	.
scaffold363	subtractBed	intrn	109059	109349	.	-	.	Parent=CGI_10019289;
	scaffold363	WUBlastX	DNA_Academ	109059	109349	49	-	.	.
scaffold363	subtractBed	intrn	117952	118252	.	-	.	Parent=CGI_10019290;
	scaffold363	TRF	Tandem_Repeat	117952	118252	204	+	.	.
scaffold363	subtractBed	intrn	117923	118254	.	-	.	Parent=CGI_10019290;
	scaffold363	TRF	Tandem_Repeat	117923	118254	225	+	.	.
scaffold363	subtractBed	intrn	137727	137784	.	+	.	Parent=CGI_10019291;
	scaffold363	TRF	Tandem_Repeat	137727	137784	73	+	.	.
scaffold363	subtractBed	intrn	137743	137784	.	+	.	Parent=CGI_10019291;
	scaffold363	TRF	Tandem_Repeat	137743	137784	66	+	.	.
scaffold363	subtractBed	intrn	137954	138986	.	+	.	Parent=CGI_10019291;
	scaffold363	TRF	Tandem_Repeat	137954	138986	1768	+	.	.
scaffold363	subtractBed	intrn	141089	141973	.	+	.	Parent=CGI_10019291;
	scaffold363	TRF	Tandem_Repeat	141089	141973	1188	+	.	.
scaffold363	subtractBed	intrn	160219	160273	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	160219	160273	110	+	.	.
scaffold363	subtractBed	intrn	161809	161886	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	161809	161886	149	+	.	.
scaffold363	subtractBed	intrn	162080	162104	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	162080	162104	50	+	.	.
scaffold363	subtractBed	intrn	163086	163124	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	163086	163124	78	+	.	.
scaffold363	subtractBed	intrn	163415	163445	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	163415	163445	62	+	.	.
scaffold363	subtractBed	intrn	165770	166277	.	+	.	Parent=CGI_10019292;
	scaffold363	TRF	Tandem_Repeat	165770	166696	1164	+	.	.
scaffold363	subtractBed	intrn	195278	195343	.	+	.	Parent=CGI_10019295;
	scaffold363	TRF	Tandem_Repeat	195278	195343	132	+	.	.
scaffold363	subtractBed	intrn	195459	195500	.	+	.	Parent=CGI_10019295;
	scaffold363	TRF	Tandem_Repeat	195459	195500	84	+	.	.
scaffold363	subtractBed	intrn	200511	200566	.	+	.	Parent=CGI_10019296;
	scaffold363	TRF	Tandem_Repeat	200511	200566	60	+	.	.
scaffold363	subtractBed	intrn	203662	203708	.	+	.	Parent=CGI_10019296;
	scaffold363	WUBlastX	DNA_hAT-Tip100	203163	203708	21	+	.	.
scaffold363	subtractBed	intrn	210384	210419	.	+	.	Parent=CGI_10019297;
	scaffold363	TRF	Tandem_Repeat	210384	210419	72	+	.	.
scaffold363	subtractBed	intrn	216121	216157	.	+	.	Parent=CGI_10019297;
	scaffold363	TRF	Tandem_Repeat	216121	216157	74	+	.	.
scaffold363	subtractBed	intrn	244398	244466	.	-	.	Parent=CGI_10019299;
	scaffold363	TRF	Tandem_Repeat	244398	244466	84	+	.	.
scaffold363	subtractBed	intrn	244398	244466	.	-	.	Parent=CGI_10019299;
	scaffold363	TRF	Tandem_Repeat	244398	244466	84	+	.	.
scaffold363	subtractBed	intrn	244398	244466	.	-	.	Parent=CGI_10019299;
	scaffold363	TRF	Tandem_Repeat	244398	244466	84	+	.	.
scaffold363	subtractBed	intrn	244976	245235	.	-	.	Parent=CGI_10019299;
	scaffold363	WUBlastX	LINE_RTE-BovB	244945	245235	76	+	.	.
scaffold363	subtractBed	intrn	245014	245262	.	-	.	Parent=CGI_10019299;
	scaffold363	WUBlastX	LINE_RTE-BovB	245014	245262	115	+	.	.
scaffold363	subtractBed	intrn	271417	272470	.	-	.	Parent=CGI_10019300;
	scaffold363	TRF	Tandem_Repeat	271417	272470	844	+	.	.
scaffold363	subtractBed	intrn	276820	276934	.	-	.	Parent=CGI_10019300;
	scaffold363	TRF	Tandem_Repeat	276820	276934	124	+	.	.
scaffold363	subtractBed	intrn	277174	277266	.	-	.	Parent=CGI_10019300;
	scaffold363	TRF	Tandem_Repeat	277174	277266	168	+	.	.
scaffold363	subtractBed	intrn	277326	277381	.	-	.	Parent=CGI_10019300;
	scaffold363	TRF	Tandem_Repeat	277326	277381	103	+	.	.
scaffold363	subtractBed	intrn	277857	277983	.	-	.	Parent=CGI_10019300;
	scaffold363	TRF	Tandem_Repeat	277857	277983	85	+	.	.
scaffold363	subtractBed	intrn	276661	276813	.	-	.	Parent=CGI_10019300;
	scaffold363	WUBlastX	DNA_Sola	276661	276813	106	-	.	.
scaffold363	subtractBed	intrn	300734	300771	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	300734	300771	51	+	.	.
scaffold363	subtractBed	intrn	304329	304358	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	304329	304358	51	+	.	.
scaffold363	subtractBed	intrn	305029	305102	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	305029	305102	130	+	.	.
scaffold363	subtractBed	intrn	305315	305342	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	305315	305342	56	+	.	.
scaffold363	subtractBed	intrn	306193	306267	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	306193	306267	150	+	.	.
scaffold363	subtractBed	intrn	309934	310360	.	+	.	Parent=CGI_10019302;
	scaffold363	TRF	Tandem_Repeat	309934	311235	1461	+	.	.
scaffold363	subtractBed	intrn	300734	300771	.	-	.	Parent=CGI_10019303;
	scaffold363	TRF	Tandem_Repeat	300734	300771	51	+	.	.
scaffold363	subtractBed	intrn	304329	304358	.	-	.	Parent=CGI_10019303;
	scaffold363	TRF	Tandem_Repeat	304329	304358	51	+	.	.
scaffold363	subtractBed	intrn	305029	305102	.	-	.	Parent=CGI_10019303;
	scaffold363	TRF	Tandem_Repeat	305029	305102	130	+	.	.
scaffold363	subtractBed	intrn	305315	305342	.	-	.	Parent=CGI_10019303;
	scaffold363	TRF	Tandem_Repeat	305315	305342	56	+	.	.
scaffold363	subtractBed	intrn	306193	306267	.	-	.	Parent=CGI_10019303;
	scaffold363	TRF	Tandem_Repeat	306193	306267	150	+	.	.
scaffold363	subtractBed	intrn	469015	470005	.	+	.	Parent=CGI_10019308;
	scaffold363	TRF	Tandem_Repeat	469015	470005	1505	+	.	.
scaffold363	subtractBed	intrn	486075	486120	.	-	.	Parent=CGI_10019309;
	scaffold363	TRF	Tandem_Repeat	486075	486120	58	+	.	.
scaffold363	subtractBed	intrn	486072	486125	.	-	.	Parent=CGI_10019309;
	scaffold363	TRF	Tandem_Repeat	486072	486125	58	+	.	.
scaffold363	subtractBed	intrn	511867	511902	.	+	.	Parent=CGI_10019312;
	scaffold363	TRF	Tandem_Repeat	511867	511902	72	+	.	.
scaffold363	subtractBed	intrn	513312	513473	.	+	.	Parent=CGI_10019312;
	scaffold363	WUBlastX	DNA_IS4EU	513312	513473	41	-	.	.
scaffold363	subtractBed	intrn	514268	514591	.	+	.	Parent=CGI_10019312;
	scaffold363	WUBlastX	DNA_IS4EU	514268	514591	108	-	.	.
scaffold363	subtractBed	intrn	513339	513500	.	+	.	Parent=CGI_10019312;
	scaffold363	WUBlastX	DNA_IS4EU	513339	513500	52	-	.	.
scaffold363	subtractBed	intrn	550008	550043	.	-	.	Parent=CGI_10019313;
	scaffold363	TRF	Tandem_Repeat	550008	550043	54	+	.	.
scaffold363	subtractBed	intrn	563785	563818	.	+	.	Parent=CGI_10019314;
	scaffold363	TRF	Tandem_Repeat	563785	563818	68	+	.	.
scaffold363	subtractBed	intrn	573481	573741	.	+	.	Parent=CGI_10019315;
	scaffold363	WUBlastX	LINE_Penelope	573481	573741	71	-	.	.
scaffold363	subtractBed	intrn	580872	580925	.	+	.	Parent=CGI_10019315;
	scaffold363	TRF	Tandem_Repeat	580872	580925	108	+	.	.
scaffold36336	subtractBed	intrn	10222	10494	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	10222	10494	215	+	.	.
scaffold36336	subtractBed	intrn	10208	10260	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	10208	10260	51	+	.	.
scaffold36336	subtractBed	intrn	15055	15097	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	15055	15097	86	+	.	.
scaffold36336	subtractBed	intrn	20175	20476	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	20175	20476	231	+	.	.
scaffold36336	subtractBed	intrn	20163	20476	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	20163	20476	296	+	.	.
scaffold36336	subtractBed	intrn	23900	25060	.	+	.	Parent=CGI_10001863;
	scaffold36336	TRF	Tandem_Repeat	23900	25060	1801	+	.	.
scaffold36342	subtractBed	intrn	31232	31274	.	-	.	Parent=CGI_10001862;
	scaffold36342	TRF	Tandem_Repeat	31232	31274	86	+	.	.
scaffold36398	subtractBed	intrn	8517	8569	.	+	.	Parent=CGI_10001931;
	scaffold36398	TRF	Tandem_Repeat	8517	8569	106	+	.	.
scaffold36398	subtractBed	intrn	9303	9412	.	+	.	Parent=CGI_10001931;
	scaffold36398	TRF	Tandem_Repeat	9303	9412	57	+	.	.
scaffold36398	subtractBed	intrn	9947	9996	.	+	.	Parent=CGI_10001931;
	scaffold36398	TRF	Tandem_Repeat	9947	9996	100	+	.	.
scaffold36398	subtractBed	intrn	17668	17724	.	+	.	Parent=CGI_10001931;
	scaffold36398	TRF	Tandem_Repeat	17668	17724	114	+	.	.
scaffold364	subtractBed	intrn	19152	19193	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	19152	19193	61	+	.	.
scaffold364	subtractBed	intrn	19286	19325	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	19286	19325	80	+	.	.
scaffold364	subtractBed	intrn	25597	25626	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	25597	25626	60	+	.	.
scaffold364	subtractBed	intrn	33978	34536	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	33978	34536	940	+	.	.
scaffold364	subtractBed	intrn	39806	39848	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	39806	39848	86	+	.	.
scaffold364	subtractBed	intrn	39859	40716	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	39859	40716	1185	+	.	.
scaffold364	subtractBed	intrn	48849	48917	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	48849	48917	57	+	.	.
scaffold364	subtractBed	intrn	51139	51341	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	51139	51341	354	+	.	.
scaffold364	subtractBed	intrn	51361	51391	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	51361	51391	62	+	.	.
scaffold364	subtractBed	intrn	51736	51981	.	+	.	Parent=CGI_10022675;
	scaffold364	WUBlastX	LINE_RTE-X	51736	51981	118	-	.	.
scaffold364	subtractBed	intrn	60853	61026	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	60853	61026	240	+	.	.
scaffold364	subtractBed	intrn	61139	61288	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	61139	61288	219	+	.	.
scaffold364	subtractBed	intrn	63515	63675	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	63515	63675	121	+	.	.
scaffold364	subtractBed	intrn	63517	63712	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	63517	63712	137	+	.	.
scaffold364	subtractBed	intrn	63957	64084	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	63957	64084	85	+	.	.
scaffold364	subtractBed	intrn	64442	64574	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	64442	64574	144	+	.	.
scaffold364	subtractBed	intrn	79654	79684	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	79654	79684	62	+	.	.
scaffold364	subtractBed	intrn	80094	80202	.	+	.	Parent=CGI_10022675;
	scaffold364	TRF	Tandem_Repeat	80094	80202	209	+	.	.
scaffold364	subtractBed	intrn	99379	99409	.	+	.	Parent=CGI_10022677;
	scaffold364	TRF	Tandem_Repeat	99379	99409	62	+	.	.
scaffold364	subtractBed	intrn	99819	99930	.	+	.	Parent=CGI_10022677;
	scaffold364	TRF	Tandem_Repeat	99819	99930	188	+	.	.
scaffold364	subtractBed	intrn	99819	100041	.	+	.	Parent=CGI_10022677;
	scaffold364	TRF	Tandem_Repeat	99819	100041	302	+	.	.
scaffold364	subtractBed	intrn	99929	100041	.	+	.	Parent=CGI_10022677;
	scaffold364	TRF	Tandem_Repeat	99929	100041	208	+	.	.
scaffold364	subtractBed	intrn	110274	110311	.	+	.	Parent=CGI_10022678;
	scaffold364	TRF	Tandem_Repeat	110274	110311	58	+	.	.
scaffold364	subtractBed	intrn	110516	111437	.	+	.	Parent=CGI_10022678;
	scaffold364	TRF	Tandem_Repeat	110516	111437	1375	+	.	.
scaffold364	subtractBed	intrn	120878	122050	.	+	.	Parent=CGI_10022679;
	scaffold364	TRF	Tandem_Repeat	120878	122050	1730	+	.	.
scaffold364	subtractBed	intrn	127400	127483	.	-	.	Parent=CGI_10022680;
	scaffold364	TRF	Tandem_Repeat	127400	127483	73	+	.	.
scaffold364	subtractBed	intrn	128779	128862	.	-	.	Parent=CGI_10022680;
	scaffold364	TRF	Tandem_Repeat	128779	128862	73	+	.	.
scaffold364	subtractBed	intrn	135759	135813	.	+	.	Parent=CGI_10022681;
	scaffold364	TRF	Tandem_Repeat	135759	135813	74	+	.	.
scaffold364	subtractBed	intrn	135760	135813	.	+	.	Parent=CGI_10022681;
	scaffold364	TRF	Tandem_Repeat	135760	135813	90	+	.	.
scaffold364	subtractBed	intrn	135983	136675	.	+	.	Parent=CGI_10022681;
	scaffold364	TRF	Tandem_Repeat	135983	136675	1052	+	.	.
scaffold364	subtractBed	intrn	183524	183703	.	+	.	Parent=CGI_10022683;
	scaffold364	WUBlastX	LINE_RTE-BovB	183524	183703	89	-	.	.
scaffold364	subtractBed	intrn	272326	272370	.	+	.	Parent=CGI_10022688;
	scaffold364	TRF	Tandem_Repeat	272326	272370	72	+	.	.
scaffold364	subtractBed	intrn	272326	272373	.	+	.	Parent=CGI_10022688;
	scaffold364	TRF	Tandem_Repeat	272326	272373	51	+	.	.
scaffold364	subtractBed	intrn	276152	276194	.	+	.	Parent=CGI_10022688;
	scaffold364	TRF	Tandem_Repeat	276152	276194	86	+	.	.
scaffold364	subtractBed	intrn	308971	309138	.	-	.	Parent=CGI_10022689;
	scaffold364	WUBlastX	DNA_Zator	308971	309138	54	-	.	.
scaffold364	subtractBed	intrn	309609	309788	.	-	.	Parent=CGI_10022689;
	scaffold364	WUBlastX	DNA_Zator	309609	309788	57	-	.	.
scaffold364	subtractBed	intrn	309939	312758	.	-	.	Parent=CGI_10022689;
	scaffold364	WUBlastX	DNA_Zator	309939	312758	1396	-	.	.
scaffold364	subtractBed	intrn	354998	355231	.	+	.	Parent=CGI_10022692;
	scaffold364	WUBlastX	DNA_Crypton	354782	355231	68	+	.	.
scaffold364	subtractBed	intrn	429207	429249	.	-	.	Parent=CGI_10022694;
	scaffold364	TRF	Tandem_Repeat	429207	429249	86	+	.	.
scaffold364	subtractBed	intrn	436652	436899	.	-	.	Parent=CGI_10022694;
	scaffold364	TRF	Tandem_Repeat	436652	436899	460	+	.	.
scaffold364	subtractBed	intrn	443986	444035	.	-	.	Parent=CGI_10022695;
	scaffold364	TRF	Tandem_Repeat	443986	444035	100	+	.	.
scaffold364	subtractBed	intrn	474412	474474	.	+	.	Parent=CGI_10022697;
	scaffold364	TRF	Tandem_Repeat	474412	474474	112	+	.	.
scaffold364	subtractBed	intrn	518654	519262	.	-	.	Parent=CGI_10022701;
	scaffold364	TRF	Tandem_Repeat	518654	519262	789	+	.	.
scaffold364	subtractBed	intrn	546584	546621	.	-	.	Parent=CGI_10022703;
	scaffold364	TRF	Tandem_Repeat	546584	546621	67	+	.	.
scaffold364	subtractBed	intrn	554426	554521	.	-	.	Parent=CGI_10022703;
	scaffold364	TRF	Tandem_Repeat	554426	554521	185	+	.	.
scaffold364	subtractBed	intrn	649839	650560	.	+	.	Parent=CGI_10022708;
	scaffold364	TRF	Tandem_Repeat	649839	650560	1047	+	.	.
scaffold364	subtractBed	intrn	715635	715635	.	-	.	Parent=CGI_10022710;
	scaffold364	WUBlastX	DNA_Crypton	715258	715635	69	-	.	.
scaffold364	subtractBed	intrn	774048	775084	.	-	.	Parent=CGI_10022712;
	scaffold364	TRF	Tandem_Repeat	774048	775084	1570	+	.	.
scaffold364	subtractBed	intrn	775246	775310	.	-	.	Parent=CGI_10022712;
	scaffold364	TRF	Tandem_Repeat	775246	775310	96	+	.	.
scaffold364	subtractBed	intrn	775249	775311	.	-	.	Parent=CGI_10022712;
	scaffold364	TRF	Tandem_Repeat	775249	775311	74	+	.	.
scaffold364	subtractBed	intrn	778127	778189	.	-	.	Parent=CGI_10022712;
	scaffold364	TRF	Tandem_Repeat	778127	778189	54	+	.	.
scaffold364	subtractBed	intrn	778126	778189	.	-	.	Parent=CGI_10022712;
	scaffold364	TRF	Tandem_Repeat	778126	778189	74	+	.	.
scaffold36410	subtractBed	intrn	11598	11628	.	-	.	Parent=CGI_10001887;
	scaffold36410	TRF	Tandem_Repeat	11598	11628	62	+	.	.
scaffold36410	subtractBed	intrn	6368	6724	.	-	.	Parent=CGI_10001887;
	scaffold36410	WUBlastX	DNA_Harbinger	6368	6724	147	+	.	.
scaffold36410	subtractBed	intrn	13955	14221	.	-	.	Parent=CGI_10001887;
	scaffold36410	WUBlastX	RC_Helitron	13955	14221	93	+	.	.
scaffold36410	subtractBed	intrn	5596	5775	.	-	.	Parent=CGI_10001887;
	scaffold36410	WUBlastX	DNA_Harbinger	5596	5775	55	+	.	.
scaffold36410	subtractBed	intrn	5617	5808	.	-	.	Parent=CGI_10001887;
	scaffold36410	WUBlastX	DNA_Harbinger	5617	5808	26	+	.	.
scaffold36410	subtractBed	intrn	14880	15173	.	-	.	Parent=CGI_10001887;
	scaffold36410	WUBlastX	RC_Helitron	14880	15173	75	+	.	.
scaffold36410	subtractBed	intrn	17827	18026	.	-	.	Parent=CGI_10001887;
	scaffold36410	TRF	Tandem_Repeat	17827	18026	95	+	.	.
scaffold36420	subtractBed	intrn	28826	29071	.	+	.	Parent=CGI_10001889;
	scaffold36420	WUBlastX	LINE_L2	28826	29071	62	-	.	.
scaffold36450	subtractBed	intrn	4220	4444	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	4220	4444	52	+	.	.
scaffold36450	subtractBed	intrn	5928	6956	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	5928	6956	342	+	.	.
scaffold36450	subtractBed	intrn	8282	9427	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	8282	9427	505	+	.	.
scaffold36450	subtractBed	intrn	5703	6929	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	5703	6929	278	+	.	.
scaffold36450	subtractBed	intrn	6972	8228	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	6972	8228	176	+	.	.
scaffold36450	subtractBed	intrn	5148	6428	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	5148	6428	63	+	.	.
scaffold36450	subtractBed	intrn	5403	6947	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	5403	6947	200	+	.	.
scaffold36450	subtractBed	intrn	4845	5942	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	4845	5942	31	+	.	.
scaffold36450	subtractBed	intrn	4151	4417	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	4151	4417	37	+	.	.
scaffold36450	subtractBed	intrn	5874	8036	.	+	.	Parent=CGI_10001979;
	scaffold36450	WUBlastX	RC_Helitron	5874	8036	239	+	.	.
scaffold36450	subtractBed	intrn	21416	21802	.	-	.	Parent=CGI_10001980;
	scaffold36450	WUBlastX	LINE_CR1-L2	21416	21802	44	-	.	.
scaffold36450	subtractBed	intrn	21056	21697	.	-	.	Parent=CGI_10001980;
	scaffold36450	WUBlastX	LINE_L2	21056	21697	92	-	.	.
scaffold36450	subtractBed	intrn	21836	22435	.	-	.	Parent=CGI_10001980;
	scaffold36450	WUBlastX	LTR_Ngaro	21836	22435	366	+	.	.
scaffold36462	subtractBed	intrn	5960	6015	.	+	.	Parent=CGI_10001928;
	scaffold36462	TRF	Tandem_Repeat	5960	6015	96	+	.	.
scaffold36462	subtractBed	intrn	24506	24570	.	-	.	Parent=CGI_10001929;
	scaffold36462	TRF	Tandem_Repeat	24506	24570	121	+	.	.
scaffold36462	subtractBed	intrn	20265	20480	.	-	.	Parent=CGI_10001929;
	scaffold36462	WUBlastX	LINE_RTE-X	20265	20480	49	-	.	.
scaffold36462	subtractBed	intrn	20268	20450	.	-	.	Parent=CGI_10001929;
	scaffold36462	WUBlastX	LINE_RTE-X	20268	20450	127	-	.	.
scaffold36462	subtractBed	intrn	20713	20754	.	-	.	Parent=CGI_10001929;
	scaffold36462	WUBlastX	LINE_RTE-X	20713	20754	23	-	.	.
scaffold36462	subtractBed	intrn	19543	20247	.	-	.	Parent=CGI_10001929;
	scaffold36462	WUBlastX	LINE_RTE-X	19543	20247	148	-	.	.
scaffold36462	subtractBed	intrn	33127	33192	.	-	.	Parent=CGI_10001930;
	scaffold36462	TRF	Tandem_Repeat	33127	33192	132	+	.	.
scaffold365	subtractBed	intrn	36354	36419	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	36354	36419	71	+	.	.
scaffold365	subtractBed	intrn	36353	36419	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	36353	36419	82	+	.	.
scaffold365	subtractBed	intrn	36353	36411	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	36353	36411	84	+	.	.
scaffold365	subtractBed	intrn	44378	44432	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	44378	44432	110	+	.	.
scaffold365	subtractBed	intrn	52341	52370	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	52341	52370	60	+	.	.
scaffold365	subtractBed	intrn	52374	52410	.	+	.	Parent=CGI_10022713;
	scaffold365	TRF	Tandem_Repeat	52374	52410	74	+	.	.
scaffold365	subtractBed	intrn	65168	65217	.	-	.	Parent=CGI_10022715;
	scaffold365	TRF	Tandem_Repeat	65168	65217	100	+	.	.
scaffold365	subtractBed	intrn	80874	81715	.	-	.	Parent=CGI_10022718;
	scaffold365	TRF	Tandem_Repeat	80874	81715	1108	+	.	.
scaffold365	subtractBed	intrn	80320	80490	.	-	.	Parent=CGI_10022718;
	scaffold365	WUBlastX	DNA_Merlin	80320	80490	63	+	.	.
scaffold365	subtractBed	intrn	81897	81941	.	-	.	Parent=CGI_10022718;
	scaffold365	TRF	Tandem_Repeat	81897	81941	54	+	.	.
scaffold365	subtractBed	intrn	91379	91475	.	-	.	Parent=CGI_10022719;
	scaffold365	TRF	Tandem_Repeat	91379	91475	126	+	.	.
scaffold365	subtractBed	intrn	94573	95321	.	-	.	Parent=CGI_10022720;
	scaffold365	TRF	Tandem_Repeat	94573	95321	866	+	.	.
scaffold365	subtractBed	intrn	96778	96811	.	-	.	Parent=CGI_10022720;
	scaffold365	TRF	Tandem_Repeat	96778	96811	59	+	.	.
scaffold365	subtractBed	intrn	100747	101702	.	-	.	Parent=CGI_10022721;
	scaffold365	TRF	Tandem_Repeat	100747	101727	738	+	.	.
scaffold365	subtractBed	intrn	109587	109830	.	-	.	Parent=CGI_10022721;
	scaffold365	TRF	Tandem_Repeat	109587	109830	194	+	.	.
scaffold365	subtractBed	intrn	137135	137205	.	-	.	Parent=CGI_10022721;
	scaffold365	TRF	Tandem_Repeat	137135	137205	61	+	.	.
scaffold365	subtractBed	intrn	140318	140511	.	-	.	Parent=CGI_10022721;
	scaffold365	TRF	Tandem_Repeat	140318	140533	166	+	.	.
scaffold365	subtractBed	intrn	170013	170150	.	-	.	Parent=CGI_10022722;
	scaffold365	WUBlastX	LINE_RTE-X	170013	170150	31	-	.	.
scaffold365	subtractBed	intrn	179883	179962	.	-	.	Parent=CGI_10022722;
	scaffold365	TRF	Tandem_Repeat	179883	179962	108	+	.	.
scaffold365	subtractBed	intrn	186591	187103	.	-	.	Parent=CGI_10022722;
	scaffold365	WUBlastX	LINE_RTE-X	186591	187103	57	-	.	.
scaffold365	subtractBed	intrn	186609	186935	.	-	.	Parent=CGI_10022722;
	scaffold365	WUBlastX	LINE_RTE-X	186609	186935	101	-	.	.
scaffold365	subtractBed	intrn	186678	187031	.	-	.	Parent=CGI_10022722;
	scaffold365	WUBlastX	LINE_RTE-X	186678	187031	94	-	.	.
scaffold365	subtractBed	intrn	195319	195725	.	-	.	Parent=CGI_10022723;
	scaffold365	TRF	Tandem_Repeat	195296	195725	618	+	.	.
scaffold365	subtractBed	intrn	246671	246719	.	+	.	Parent=CGI_10022724;
	scaffold365	TRF	Tandem_Repeat	246671	246719	80	+	.	.
scaffold365	subtractBed	intrn	250956	251787	.	+	.	Parent=CGI_10022724;
	scaffold365	TRF	Tandem_Repeat	250956	251787	680	+	.	.
scaffold365	subtractBed	intrn	252133	253446	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	252133	253446	575	+	.	.
scaffold365	subtractBed	intrn	254938	255099	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	254938	255099	56	+	.	.
scaffold365	subtractBed	intrn	253669	253857	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	253669	253857	29	+	.	.
scaffold365	subtractBed	intrn	253761	253859	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	253761	253859	32	+	.	.
scaffold365	subtractBed	intrn	251830	251889	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	251830	251889	28	+	.	.
scaffold365	subtractBed	intrn	250496	250693	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	250496	250693	118	+	.	.
scaffold365	subtractBed	intrn	248785	250491	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	248785	250491	265	+	.	.
scaffold365	subtractBed	intrn	248415	248756	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	248415	248756	60	+	.	.
scaffold365	subtractBed	intrn	251995	252378	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	251995	252378	29	+	.	.
scaffold365	subtractBed	intrn	253983	254939	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	LTR_Pao	253983	254939	371	+	.	.
scaffold365	subtractBed	intrn	267516	267602	.	+	.	Parent=CGI_10022724;
	scaffold365	TRF	Tandem_Repeat	267516	267602	165	+	.	.
scaffold365	subtractBed	intrn	271259	271505	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	RC_Helitron	271259	271690	73	+	.	.
scaffold365	subtractBed	intrn	271667	271690	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	RC_Helitron	271259	271690	73	+	.	.
scaffold365	subtractBed	intrn	272200	272205	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	RC_Helitron	271999	272205	88	+	.	.
scaffold365	subtractBed	intrn	275497	276594	.	+	.	Parent=CGI_10022724;
	scaffold365	TRF	Tandem_Repeat	275497	276594	1008	+	.	.
scaffold365	subtractBed	intrn	285656	285739	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	DNA_Kolobok	285656	285739	32	+	.	.
scaffold365	subtractBed	intrn	284594	284701	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	DNA_Kolobok	284594	284701	36	+	.	.
scaffold365	subtractBed	intrn	285171	285419	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	DNA_Kolobok	285171	285419	104	+	.	.
scaffold365	subtractBed	intrn	286218	286436	.	+	.	Parent=CGI_10022724;
	scaffold365	WUBlastX	DNA_Kolobok	286218	286436	90	+	.	.
scaffold365	subtractBed	intrn	293699	293773	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	293699	293773	36	+	.	.
scaffold365	subtractBed	intrn	294610	294786	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	294610	294786	47	+	.	.
scaffold365	subtractBed	intrn	293350	293604	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	293350	293604	150	+	.	.
scaffold365	subtractBed	intrn	294604	294744	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	294604	294744	48	+	.	.
scaffold365	subtractBed	intrn	293828	294016	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	293828	294016	25	+	.	.
scaffold365	subtractBed	intrn	292970	293254	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	292970	293254	150	+	.	.
scaffold365	subtractBed	intrn	294128	294349	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	294128	294349	67	+	.	.
scaffold365	subtractBed	intrn	295069	295311	.	+	.	Parent=CGI_10022726;
	scaffold365	WUBlastX	DNA_Kolobok	295069	295311	103	+	.	.
scaffold365	subtractBed	intrn	310900	310941	.	+	.	Parent=CGI_10022728;
	scaffold365	TRF	Tandem_Repeat	310900	310941	84	+	.	.
scaffold365	subtractBed	intrn	362040	362087	.	-	.	Parent=CGI_10022731;
	scaffold365	TRF	Tandem_Repeat	362040	362087	96	+	.	.
scaffold365	subtractBed	intrn	383623	383669	.	-	.	Parent=CGI_10022732;
	scaffold365	TRF	Tandem_Repeat	383623	383669	94	+	.	.
scaffold365	subtractBed	intrn	436167	436219	.	-	.	Parent=CGI_10022735;
	scaffold365	TRF	Tandem_Repeat	436167	436219	54	+	.	.
scaffold365	subtractBed	intrn	446870	446872	.	-	.	Parent=CGI_10022738;
	scaffold365	WUBlastX	LINE_L1	446318	446872	22	-	.	.
scaffold365	subtractBed	intrn	463478	463676	.	-	.	Parent=CGI_10022739;
	scaffold365	TRF	Tandem_Repeat	463478	463676	118	+	.	.
scaffold365	subtractBed	intrn	468104	468149	.	-	.	Parent=CGI_10022739;
	scaffold365	TRF	Tandem_Repeat	468104	468149	83	+	.	.
scaffold365	subtractBed	intrn	479760	480502	.	-	.	Parent=CGI_10022740;
	scaffold365	TRF	Tandem_Repeat	479760	480502	988	+	.	.
scaffold365	subtractBed	intrn	511680	511736	.	+	.	Parent=CGI_10022741;
	scaffold365	TRF	Tandem_Repeat	511680	511736	107	+	.	.
scaffold365	subtractBed	intrn	528982	529027	.	-	.	Parent=CGI_10022742;
	scaffold365	TRF	Tandem_Repeat	528982	529027	92	+	.	.
scaffold365	subtractBed	intrn	560111	560152	.	-	.	Parent=CGI_10022742;
	scaffold365	TRF	Tandem_Repeat	560111	560152	77	+	.	.
scaffold365	subtractBed	intrn	560610	560642	.	-	.	Parent=CGI_10022742;
	scaffold365	TRF	Tandem_Repeat	560610	560642	66	+	.	.
scaffold365	subtractBed	intrn	580621	580659	.	+	.	Parent=CGI_10022743;
	scaffold365	WUBlastX	DNA_Kolobok-Hyd	580621	581292	36	-	.	.
scaffold365	subtractBed	intrn	581478	581558	.	+	.	Parent=CGI_10022743;
	scaffold365	WUBlastX	DNA_Kolobok-Hyd	581478	581558	22	-	.	.
scaffold365	subtractBed	intrn	580621	580659	.	-	.	Parent=CGI_10022744;
	scaffold365	WUBlastX	DNA_Kolobok-Hyd	580621	581292	36	-	.	.
scaffold365	subtractBed	intrn	621402	621444	.	-	.	Parent=CGI_10022746;
	scaffold365	TRF	Tandem_Repeat	621402	621444	86	+	.	.
scaffold365	subtractBed	intrn	623959	624092	.	-	.	Parent=CGI_10022746;
	scaffold365	TRF	Tandem_Repeat	623959	624092	105	+	.	.
scaffold365	subtractBed	intrn	628275	628316	.	-	.	Parent=CGI_10022746;
	scaffold365	TRF	Tandem_Repeat	628275	628316	52	+	.	.
scaffold365	subtractBed	intrn	665597	665659	.	+	.	Parent=CGI_10022748;
	scaffold365	TRF	Tandem_Repeat	665597	665659	119	+	.	.
scaffold365	subtractBed	intrn	687918	687986	.	+	.	Parent=CGI_10022751;
	scaffold365	TRF	Tandem_Repeat	687918	687986	138	+	.	.
scaffold365	subtractBed	intrn	698815	699693	.	-	.	Parent=CGI_10022752;
	scaffold365	WUBlastX	DNA_TcMar-Tc1	698815	699693	423	-	.	.
scaffold365	subtractBed	intrn	701196	701246	.	-	.	Parent=CGI_10022752;
	scaffold365	TRF	Tandem_Repeat	701196	701246	102	+	.	.
scaffold365	subtractBed	intrn	708181	708245	.	-	.	Parent=CGI_10022752;
	scaffold365	TRF	Tandem_Repeat	708181	708245	58	+	.	.
scaffold365	subtractBed	intrn	709232	709998	.	-	.	Parent=CGI_10022752;
	scaffold365	TRF	Tandem_Repeat	709232	709998	963	+	.	.
scaffold365	subtractBed	intrn	710110	710147	.	-	.	Parent=CGI_10022752;
	scaffold365	TRF	Tandem_Repeat	710110	710147	58	+	.	.
scaffold365	subtractBed	intrn	711826	711855	.	-	.	Parent=CGI_10022752;
	scaffold365	TRF	Tandem_Repeat	711826	711855	60	+	.	.
scaffold365	subtractBed	intrn	701196	701246	.	+	.	Parent=CGI_10022753;
	scaffold365	TRF	Tandem_Repeat	701196	701246	102	+	.	.
scaffold365	subtractBed	intrn	741824	741914	.	-	.	Parent=CGI_10022756;
	scaffold365	TRF	Tandem_Repeat	741824	741914	65	+	.	.
scaffold36526	subtractBed	intrn	21483	21950	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1	21483	21950	76	-	.	.
scaffold36526	subtractBed	intrn	20526	20948	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1-Tx1	20526	20948	45	-	.	.
scaffold36526	subtractBed	intrn	21217	21417	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1	21217	21417	73	-	.	.
scaffold36526	subtractBed	intrn	21067	21417	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1-Tx1	21067	21417	47	-	.	.
scaffold36526	subtractBed	intrn	21169	21438	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1-Tx1	21169	21438	52	-	.	.
scaffold36526	subtractBed	intrn	20604	20948	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1-Tx1	20604	20948	53	-	.	.
scaffold36526	subtractBed	intrn	21624	22049	.	+	.	Parent=CGI_10002008;
	scaffold36526	WUBlastX	LINE_L1-Tx1	21624	22049	172	-	.	.
scaffold36572	subtractBed	intrn	9077	9117	.	-	.	Parent=CGI_10002009;
	scaffold36572	TRF	Tandem_Repeat	9077	9117	82	+	.	.
scaffold36598	subtractBed	intrn	11596	11931	.	+	.	Parent=CGI_10002012;
	scaffold36598	WUBlastX	DNA_IS4EU	11596	11931	85	+	.	.
scaffold36598	subtractBed	intrn	12817	13545	.	+	.	Parent=CGI_10002012;
	scaffold36598	WUBlastX	DNA_Kolobok-IS4	12817	13545	130	-	.	.
scaffold36598	subtractBed	intrn	12892	13779	.	+	.	Parent=CGI_10002012;
	scaffold36598	WUBlastX	DNA_IS4EU	12892	13779	61	-	.	.
scaffold36598	subtractBed	intrn	27987	28955	.	-	.	Parent=CGI_10002013;
	scaffold36598	WUBlastX	LTR_Ngaro	27987	28955	157	-	.	.
scaffold36598	subtractBed	intrn	29580	30023	.	-	.	Parent=CGI_10002013;
	scaffold36598	WUBlastX	LTR_Ngaro	29580	30023	163	-	.	.
scaffold36598	subtractBed	intrn	30301	31068	.	-	.	Parent=CGI_10002013;
	scaffold36598	WUBlastX	LTR_Ngaro	30301	31068	379	-	.	.
scaffold36598	subtractBed	intrn	28892	29107	.	-	.	Parent=CGI_10002013;
	scaffold36598	WUBlastX	LTR_Ngaro	28892	29107	112	-	.	.
scaffold36598	subtractBed	intrn	30041	30256	.	-	.	Parent=CGI_10002013;
	scaffold36598	WUBlastX	LTR_Ngaro	30041	30256	149	-	.	.
scaffold366	subtractBed	intrn	10694	10732	.	-	.	Parent=CGI_10007770;
	scaffold366	TRF	Tandem_Repeat	10694	10732	53	+	.	.
scaffold366	subtractBed	intrn	11619	11636	.	-	.	Parent=CGI_10007770;
	scaffold366	WUBlastX	DNA_Novosib	11619	11789	30	+	.	.
scaffold366	subtractBed	intrn	11796	11804	.	-	.	Parent=CGI_10007770;
	scaffold366	WUBlastX	LTR_Gypsy	11652	11804	89	+	.	.
scaffold366	subtractBed	intrn	10694	10732	.	+	.	Parent=CGI_10007771;
	scaffold366	TRF	Tandem_Repeat	10694	10732	53	+	.	.
scaffold366	subtractBed	intrn	11619	11636	.	+	.	Parent=CGI_10007771;
	scaffold366	WUBlastX	DNA_Novosib	11619	11789	30	+	.	.
scaffold366	subtractBed	intrn	11796	11804	.	+	.	Parent=CGI_10007771;
	scaffold366	WUBlastX	LTR_Gypsy	11652	11804	89	+	.	.
scaffold366	subtractBed	intrn	13994	14081	.	+	.	Parent=CGI_10007771;
	scaffold366	TRF	Tandem_Repeat	13994	14081	118	+	.	.
scaffold366	subtractBed	intrn	18636	18662	.	+	.	Parent=CGI_10007771;
	scaffold366	TRF	Tandem_Repeat	18636	18662	54	+	.	.
scaffold366	subtractBed	intrn	41247	41742	.	-	.	Parent=CGI_10007772;
	scaffold366	TRF	Tandem_Repeat	41247	41750	536	+	.	.
scaffold366	subtractBed	intrn	42011	42387	.	-	.	Parent=CGI_10007772;
	scaffold366	TRF	Tandem_Repeat	42011	42387	337	+	.	.
scaffold366	subtractBed	intrn	68170	70871	.	+	.	Parent=CGI_10007774;
	scaffold366	TRF	Tandem_Repeat	68170	70871	1280	+	.	.
scaffold366	subtractBed	intrn	68170	69450	.	+	.	Parent=CGI_10007774;
	scaffold366	TRF	Tandem_Repeat	68170	69450	1270	+	.	.
scaffold366	subtractBed	intrn	69765	71016	.	+	.	Parent=CGI_10007774;
	scaffold366	TRF	Tandem_Repeat	69765	71016	2359	+	.	.
scaffold366	subtractBed	intrn	77213	78152	.	+	.	Parent=CGI_10007774;
	scaffold366	TRF	Tandem_Repeat	77213	78152	1023	+	.	.
scaffold366	subtractBed	intrn	88146	88880	.	+	.	Parent=CGI_10007774;
	scaffold366	TRF	Tandem_Repeat	88146	88880	1149	+	.	.
scaffold366	subtractBed	intrn	109346	109398	.	+	.	Parent=CGI_10007776;
	scaffold366	TRF	Tandem_Repeat	109346	109398	106	+	.	.
scaffold366	subtractBed	intrn	108543	109022	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	108543	109022	212	-	.	.
scaffold366	subtractBed	intrn	107359	107827	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	107351	107827	419	+	.	.
scaffold366	subtractBed	intrn	117912	117958	.	+	.	Parent=CGI_10007776;
	scaffold366	TRF	Tandem_Repeat	117912	117958	85	+	.	.
scaffold366	subtractBed	intrn	119128	119361	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	119128	119361	82	-	.	.
scaffold366	subtractBed	intrn	119340	119579	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	119340	119579	92	-	.	.
scaffold366	subtractBed	intrn	117429	117698	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	117429	117698	107	+	.	.
scaffold366	subtractBed	intrn	119074	119382	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	119074	119382	79	-	.	.
scaffold366	subtractBed	intrn	119188	119361	.	+	.	Parent=CGI_10007776;
	scaffold366	WUBlastX	DNA_Harbinger	119188	119361	92	-	.	.
scaffold366	subtractBed	intrn	124177	124227	.	+	.	Parent=CGI_10007777;
	scaffold366	TRF	Tandem_Repeat	124177	124227	102	+	.	.
scaffold366	subtractBed	intrn	127152	127231	.	+	.	Parent=CGI_10007777;
	scaffold366	TRF	Tandem_Repeat	127152	127231	160	+	.	.
scaffold366	subtractBed	intrn	128542	128660	.	+	.	Parent=CGI_10007777;
	scaffold366	TRF	Tandem_Repeat	128542	128660	168	+	.	.
scaffold36638	subtractBed	intrn	15377	15442	.	+	.	Parent=CGI_10002047;
	scaffold36638	TRF	Tandem_Repeat	15377	15442	59	+	.	.
scaffold36638	subtractBed	intrn	15515	15636	.	+	.	Parent=CGI_10002047;
	scaffold36638	TRF	Tandem_Repeat	15515	15636	52	+	.	.
scaffold36638	subtractBed	intrn	13742	13972	.	+	.	Parent=CGI_10002047;
	scaffold36638	WUBlastX	LINE_RTE-X	13742	13972	49	+	.	.
scaffold36638	subtractBed	intrn	13868	13984	.	+	.	Parent=CGI_10002047;
	scaffold36638	WUBlastX	LINE_RTE-X	13868	13984	69	+	.	.
scaffold36638	subtractBed	intrn	24991	25659	.	-	.	Parent=CGI_10002048;
	scaffold36638	TRF	Tandem_Repeat	24991	25659	777	+	.	.
scaffold36638	subtractBed	intrn	25251	25406	.	-	.	Parent=CGI_10002048;
	scaffold36638	TRF	Tandem_Repeat	25251	25406	82	+	.	.
scaffold36642	subtractBed	intrn	1347	1379	.	+	.	Parent=CGI_10002025;
	scaffold36642	TRF	Tandem_Repeat	1347	1379	57	+	.	.
scaffold36642	subtractBed	intrn	2048	2096	.	+	.	Parent=CGI_10002025;
	scaffold36642	TRF	Tandem_Repeat	2048	2096	55	+	.	.
scaffold36642	subtractBed	intrn	2482	2808	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1-Tx1	2482	2808	68	-	.	.
scaffold36642	subtractBed	intrn	2365	2808	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1-Tx1	2365	2808	31	-	.	.
scaffold36642	subtractBed	intrn	3237	3746	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1-Tx1	3237	3746	55	-	.	.
scaffold36642	subtractBed	intrn	3125	3268	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1	3125	3268	43	-	.	.
scaffold36642	subtractBed	intrn	3333	3764	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1-Tx1	3333	3764	137	-	.	.
scaffold36642	subtractBed	intrn	3077	3268	.	+	.	Parent=CGI_10002025;
	scaffold36642	WUBlastX	LINE_L1	3077	3268	25	-	.	.
scaffold36642	subtractBed	intrn	7210	7259	.	+	.	Parent=CGI_10002025;
	scaffold36642	TRF	Tandem_Repeat	7210	7259	66	+	.	.
scaffold36642	subtractBed	intrn	8683	9611	.	+	.	Parent=CGI_10002025;
	scaffold36642	TRF	Tandem_Repeat	8683	9611	1101	+	.	.
scaffold36674	subtractBed	intrn	5587	5632	.	+	.	Parent=CGI_10002040;
	scaffold36674	TRF	Tandem_Repeat	5587	5632	76	+	.	.
scaffold36674	subtractBed	intrn	5582	5635	.	+	.	Parent=CGI_10002040;
	scaffold36674	TRF	Tandem_Repeat	5582	5635	76	+	.	.
scaffold36674	subtractBed	intrn	24832	24872	.	-	.	Parent=CGI_10002041;
	scaffold36674	TRF	Tandem_Repeat	24832	24872	82	+	.	.
scaffold36698	subtractBed	intrn	3653	5377	.	-	.	Parent=CGI_10002014;
	scaffold36698	TRF	Tandem_Repeat	3653	5377	2003	+	.	.
scaffold36698	subtractBed	intrn	5562	5600	.	-	.	Parent=CGI_10002014;
	scaffold36698	TRF	Tandem_Repeat	5562	5600	51	+	.	.
scaffold36698	subtractBed	intrn	2444	2623	.	-	.	Parent=CGI_10002014;
	scaffold36698	WUBlastX	DNA_TcMar-Marin	2444	2623	39	-	.	.
scaffold36698	subtractBed	intrn	2417	2635	.	-	.	Parent=CGI_10002014;
	scaffold36698	WUBlastX	DNA_TcMar-Marin	2417	2635	36	-	.	.
scaffold36698	subtractBed	intrn	7923	7989	.	-	.	Parent=CGI_10002015;
	scaffold36698	TRF	Tandem_Repeat	7923	7989	66	+	.	.
scaffold36698	subtractBed	intrn	8111	9239	.	-	.	Parent=CGI_10002015;
	scaffold36698	TRF	Tandem_Repeat	8111	9239	1167	+	.	.
scaffold36698	subtractBed	intrn	8112	9296	.	-	.	Parent=CGI_10002015;
	scaffold36698	TRF	Tandem_Repeat	8112	9296	1088	+	.	.
scaffold36716	subtractBed	intrn	7877	7920	.	+	.	Parent=CGI_10002099;
	scaffold36716	TRF	Tandem_Repeat	7877	7920	88	+	.	.
scaffold36728	subtractBed	intrn	671	1699	.	-	.	Parent=CGI_10002097;
	scaffold36728	WUBlastX	LINE_Penelope	671	1699	422	-	.	.
scaffold36728	subtractBed	intrn	3852	5267	.	-	.	Parent=CGI_10002097;
	scaffold36728	WUBlastX	LINE_RTE-X	3852	5267	685	-	.	.
scaffold36728	subtractBed	intrn	19112	19409	.	-	.	Parent=CGI_10002098;
	scaffold36728	TRF	Tandem_Repeat	19112	19409	276	+	.	.
scaffold36728	subtractBed	intrn	23689	24246	.	-	.	Parent=CGI_10002098;
	scaffold36728	TRF	Tandem_Repeat	23689	24246	954	+	.	.
scaffold36768	subtractBed	intrn	36533	36691	.	+	.	Parent=CGI_10002113;
	scaffold36768	WUBlastX	LINE_L1-Tx1	36533	36691	82	+	.	.
scaffold36768	subtractBed	intrn	36685	37212	.	+	.	Parent=CGI_10002113;
	scaffold36768	WUBlastX	LINE_L1-Tx1	36685	37212	169	+	.	.
scaffold36768	subtractBed	intrn	36494	36679	.	+	.	Parent=CGI_10002113;
	scaffold36768	WUBlastX	LINE_L1-Tx1	36494	36679	55	+	.	.
scaffold36768	subtractBed	intrn	36685	37359	.	+	.	Parent=CGI_10002113;
	scaffold36768	WUBlastX	LINE_L1	36685	37359	59	+	.	.
scaffold36790	subtractBed	intrn	26004	26495	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	26004	26495	177	+	.	.
scaffold36790	subtractBed	intrn	25776	25859	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	25776	25859	28	+	.	.
scaffold36790	subtractBed	intrn	26527	26805	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	26527	26805	129	+	.	.
scaffold36790	subtractBed	intrn	26028	26633	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	26028	26633	138	+	.	.
scaffold36790	subtractBed	intrn	25463	25768	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	25463	25768	157	+	.	.
scaffold36790	subtractBed	intrn	25324	25449	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	25324	25449	77	+	.	.
scaffold36790	subtractBed	intrn	25791	25865	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	25791	25865	56	+	.	.
scaffold36790	subtractBed	intrn	26094	26501	.	-	.	Parent=CGI_10002141;
	scaffold36790	WUBlastX	LTR_Ngaro	26094	26501	198	+	.	.
scaffold36794	subtractBed	intrn	6054	7679	.	+	.	Parent=CGI_10002119;
	scaffold36794	WUBlastX	LTR_Ngaro	6054	7679	1037	+	.	.
scaffold36794	subtractBed	intrn	4940	6133	.	+	.	Parent=CGI_10002119;
	scaffold36794	WUBlastX	LTR_Ngaro	4940	6133	93	+	.	.
scaffold36794	subtractBed	intrn	5477	6130	.	+	.	Parent=CGI_10002119;
	scaffold36794	WUBlastX	LTR_Ngaro	5477	6130	154	+	.	.
scaffold368	subtractBed	intrn	19091	19122	.	+	.	Parent=CGI_10018689;
	scaffold368	TRF	Tandem_Repeat	19091	19122	57	+	.	.
scaffold368	subtractBed	intrn	31753	31803	.	-	.	Parent=CGI_10018691;
	scaffold368	TRF	Tandem_Repeat	31753	31803	102	+	.	.
scaffold368	subtractBed	intrn	31236	31544	.	-	.	Parent=CGI_10018691;
	scaffold368	WUBlastX	DNA_Harbinger	31236	31544	48	+	.	.
scaffold368	subtractBed	intrn	31365	31544	.	-	.	Parent=CGI_10018691;
	scaffold368	WUBlastX	DNA_Harbinger	31365	31544	60	+	.	.
scaffold368	subtractBed	intrn	40671	40826	.	-	.	Parent=CGI_10018691;
	scaffold368	WUBlastX	DNA_Harbinger	40671	40826	61	-	.	.
scaffold368	subtractBed	intrn	40072	40233	.	-	.	Parent=CGI_10018691;
	scaffold368	WUBlastX	DNA_Harbinger	40072	40233	91	-	.	.
scaffold368	subtractBed	intrn	64489	64536	.	+	.	Parent=CGI_10018694;
	scaffold368	TRF	Tandem_Repeat	64489	64536	96	+	.	.
scaffold368	subtractBed	intrn	71109	71198	.	+	.	Parent=CGI_10018695;
	scaffold368	TRF	Tandem_Repeat	71109	71198	166	+	.	.
scaffold368	subtractBed	intrn	87474	87527	.	-	.	Parent=CGI_10018696;
	scaffold368	TRF	Tandem_Repeat	87474	87527	108	+	.	.
scaffold368	subtractBed	intrn	90390	90428	.	-	.	Parent=CGI_10018696;
	scaffold368	TRF	Tandem_Repeat	90390	90428	60	+	.	.
scaffold368	subtractBed	intrn	89505	90167	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_Kolobok-IS4	89505	90167	178	+	.	.
scaffold368	subtractBed	intrn	88281	88631	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_IS4EU	88281	88631	59	+	.	.
scaffold368	subtractBed	intrn	89082	90041	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_IS4EU	89082	90041	65	+	.	.
scaffold368	subtractBed	intrn	88119	88631	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_Kolobok-IS4	88119	88631	54	+	.	.
scaffold368	subtractBed	intrn	89322	90167	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_IS4EU	89322	90167	149	+	.	.
scaffold368	subtractBed	intrn	89028	89342	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_IS4EU	89028	89342	46	+	.	.
scaffold368	subtractBed	intrn	90561	91697	.	-	.	Parent=CGI_10018696;
	scaffold368	WUBlastX	DNA_IS4EU	90561	91697	556	-	.	.
scaffold368	subtractBed	intrn	131502	131572	.	+	.	Parent=CGI_10018700;
	scaffold368	TRF	Tandem_Repeat	131502	131572	142	+	.	.
scaffold368	subtractBed	intrn	131570	131594	.	+	.	Parent=CGI_10018700;
	scaffold368	TRF	Tandem_Repeat	131570	131594	50	+	.	.
scaffold368	subtractBed	intrn	131966	132042	.	+	.	Parent=CGI_10018700;
	scaffold368	TRF	Tandem_Repeat	131966	132042	138	+	.	.
scaffold368	subtractBed	intrn	133860	133896	.	+	.	Parent=CGI_10018700;
	scaffold368	TRF	Tandem_Repeat	133860	133896	74	+	.	.
scaffold368	subtractBed	intrn	135146	135191	.	+	.	Parent=CGI_10018700;
	scaffold368	TRF	Tandem_Repeat	135146	135191	85	+	.	.
scaffold368	subtractBed	intrn	355384	355424	.	+	.	Parent=CGI_10018712;
	scaffold368	TRF	Tandem_Repeat	355384	355424	82	+	.	.
scaffold368	subtractBed	intrn	357336	357460	.	+	.	Parent=CGI_10018712;
	scaffold368	TRF	Tandem_Repeat	357336	357460	164	+	.	.
scaffold368	subtractBed	intrn	466913	466987	.	+	.	Parent=CGI_10018714;
	scaffold368	TRF	Tandem_Repeat	466913	466987	136	+	.	.
scaffold368	subtractBed	intrn	487684	489363	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy	487684	489363	1076	-	.	.
scaffold368	subtractBed	intrn	487601	487693	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Copia	487601	487693	24	-	.	.
scaffold368	subtractBed	intrn	489954	491180	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy	489954	491180	421	-	.	.
scaffold368	subtractBed	intrn	489963	490874	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy	489963	490874	780	-	.	.
scaffold368	subtractBed	intrn	487831	489936	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy-Cigr	487831	489936	1059	-	.	.
scaffold368	subtractBed	intrn	492032	492805	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy	492032	492805	204	-	.	.
scaffold368	subtractBed	intrn	490933	491892	.	+	.	Parent=CGI_10018714;
	scaffold368	WUBlastX	LTR_Gypsy	490933	491892	212	-	.	.
scaffold36806	subtractBed	intrn	25022	25216	.	+	.	Parent=CGI_10002150;
	scaffold36806	WUBlastX	LTR_Ngaro	25022	25216	51	+	.	.
scaffold36806	subtractBed	intrn	25141	25236	.	+	.	Parent=CGI_10002150;
	scaffold36806	WUBlastX	LTR_Ngaro	25141	25236	27	+	.	.
scaffold36806	subtractBed	intrn	24091	24990	.	+	.	Parent=CGI_10002150;
	scaffold36806	WUBlastX	LTR_Ngaro	24091	24990	415	+	.	.
scaffold36808	subtractBed	intrn	2936	2986	.	-	.	Parent=CGI_10002145;
	scaffold36808	TRF	Tandem_Repeat	2936	2986	102	+	.	.
scaffold36808	subtractBed	intrn	1481	1654	.	-	.	Parent=CGI_10002145;
	scaffold36808	WUBlastX	LTR_ERV1	1481	1654	23	+	.	.
scaffold36808	subtractBed	intrn	9162	9188	.	-	.	Parent=CGI_10002145;
	scaffold36808	TRF	Tandem_Repeat	9162	9188	54	+	.	.
scaffold36808	subtractBed	intrn	35358	35486	.	-	.	Parent=CGI_10002147;
	scaffold36808	WUBlastX	LINE_RTE-X	35358	35486	40	+	.	.
scaffold36808	subtractBed	intrn	35334	35486	.	-	.	Parent=CGI_10002147;
	scaffold36808	WUBlastX	LINE_RTE-X	35334	35486	33	+	.	.
scaffold36808	subtractBed	intrn	35346	35549	.	-	.	Parent=CGI_10002147;
	scaffold36808	WUBlastX	LINE_RTE-X	35346	35549	29	+	.	.
scaffold36848	subtractBed	intrn	12885	12915	.	-	.	Parent=CGI_10002148;
	scaffold36848	TRF	Tandem_Repeat	12885	12915	53	+	.	.
scaffold36862	subtractBed	intrn	24442	24489	.	+	.	Parent=CGI_10002161;
	scaffold36862	TRF	Tandem_Repeat	24442	24489	96	+	.	.
scaffold36898	subtractBed	intrn	16232	16271	.	+	.	Parent=CGI_10002176;
	scaffold36898	TRF	Tandem_Repeat	16232	16271	80	+	.	.
scaffold369	subtractBed	intrn	77348	77415	.	-	.	Parent=CGI_10006952;
	scaffold369	TRF	Tandem_Repeat	77348	77415	86	+	.	.
scaffold369	subtractBed	intrn	83418	83451	.	-	.	Parent=CGI_10006952;
	scaffold369	TRF	Tandem_Repeat	83418	83451	68	+	.	.
scaffold369	subtractBed	intrn	98983	99018	.	+	.	Parent=CGI_10006953;
	scaffold369	TRF	Tandem_Repeat	98983	99018	72	+	.	.
scaffold369	subtractBed	intrn	106838	106946	.	+	.	Parent=CGI_10006955;
	scaffold369	TRF	Tandem_Repeat	106838	106946	154	+	.	.
scaffold369	subtractBed	intrn	108498	108530	.	+	.	Parent=CGI_10006955;
	scaffold369	TRF	Tandem_Repeat	108498	108530	66	+	.	.
scaffold369	subtractBed	intrn	128381	128404	.	+	.	Parent=CGI_10006957;
	scaffold369	TRF	Tandem_Repeat	128305	128404	150	+	.	.
scaffold369	subtractBed	intrn	128381	128412	.	+	.	Parent=CGI_10006957;
	scaffold369	TRF	Tandem_Repeat	128367	128412	67	+	.	.
scaffold369	subtractBed	intrn	149938	150074	.	+	.	Parent=CGI_10006958;
	scaffold369	TRF	Tandem_Repeat	149938	150074	148	+	.	.
scaffold369	subtractBed	intrn	151237	151284	.	+	.	Parent=CGI_10006958;
	scaffold369	TRF	Tandem_Repeat	151237	151284	69	+	.	.
scaffold369	subtractBed	intrn	162038	162084	.	+	.	Parent=CGI_10006958;
	scaffold369	TRF	Tandem_Repeat	162038	162084	94	+	.	.
scaffold369	subtractBed	intrn	161627	161860	.	+	.	Parent=CGI_10006958;
	scaffold369	WUBlastX	LINE_Penelope	161627	161860	42	+	.	.
scaffold369	subtractBed	intrn	162613	163017	.	+	.	Parent=CGI_10006958;
	scaffold369	WUBlastX	LINE_Penelope	162613	163017	21	+	.	.
scaffold369	subtractBed	intrn	161507	161893	.	+	.	Parent=CGI_10006958;
	scaffold369	WUBlastX	LINE_Penelope	161507	161893	31	+	.	.
scaffold369	subtractBed	intrn	161489	161947	.	+	.	Parent=CGI_10006958;
	scaffold369	WUBlastX	LINE_Penelope	161489	161947	30	+	.	.
scaffold369	subtractBed	intrn	162595	162900	.	+	.	Parent=CGI_10006958;
	scaffold369	WUBlastX	LINE_Penelope	162595	162900	123	+	.	.
scaffold36904	subtractBed	intrn	14697	14729	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	14697	14729	66	+	.	.
scaffold36904	subtractBed	intrn	17128	17296	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	17128	17296	107	+	.	.
scaffold36904	subtractBed	intrn	17147	17242	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	17147	17242	66	+	.	.
scaffold36904	subtractBed	intrn	17128	17278	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	17128	17278	143	+	.	.
scaffold36904	subtractBed	intrn	17196	17326	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	17196	17326	117	+	.	.
scaffold36904	subtractBed	intrn	17171	17308	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	17171	17308	170	+	.	.
scaffold36904	subtractBed	intrn	23268	23330	.	-	.	Parent=CGI_10002168;
	scaffold36904	WUBlastX	LTR_Gypsy	23268	23330	22	+	.	.
scaffold36904	subtractBed	intrn	26209	26255	.	-	.	Parent=CGI_10002168;
	scaffold36904	TRF	Tandem_Repeat	26209	26255	94	+	.	.
scaffold36904	subtractBed	intrn	28294	28404	.	-	.	Parent=CGI_10002168;
	scaffold36904	WUBlastX	LINE_CR1	28294	28404	21	-	.	.
scaffold36904	subtractBed	intrn	26951	27760	.	-	.	Parent=CGI_10002168;
	scaffold36904	WUBlastX	LINE_L2	26951	27760	345	-	.	.
scaffold36906	subtractBed	intrn	1606	1672	.	+	.	Parent=CGI_10002185;
	scaffold36906	TRF	Tandem_Repeat	1606	1672	71	+	.	.
scaffold36906	subtractBed	intrn	2183	2231	.	+	.	Parent=CGI_10002185;
	scaffold36906	TRF	Tandem_Repeat	2183	2231	98	+	.	.
scaffold36906	subtractBed	intrn	17139	17219	.	+	.	Parent=CGI_10002185;
	scaffold36906	WUBlastX	LTR_DIRS	17139	17219	33	-	.	.
scaffold36906	subtractBed	intrn	17236	17844	.	+	.	Parent=CGI_10002185;
	scaffold36906	WUBlastX	LTR_DIRS	17236	17844	428	-	.	.
scaffold36906	subtractBed	intrn	17224	18072	.	+	.	Parent=CGI_10002185;
	scaffold36906	WUBlastX	LTR_DIRS	17224	18072	338	-	.	.
scaffold36906	subtractBed	intrn	16256	17179	.	+	.	Parent=CGI_10002185;
	scaffold36906	WUBlastX	LTR_DIRS	16256	17179	416	-	.	.
scaffold36928	subtractBed	intrn	11283	11337	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	11283	11337	56	+	.	.
scaffold36928	subtractBed	intrn	11284	11337	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	11284	11337	72	+	.	.
scaffold36928	subtractBed	intrn	11413	11444	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	11413	11444	64	+	.	.
scaffold36928	subtractBed	intrn	16520	16557	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	16520	16557	76	+	.	.
scaffold36928	subtractBed	intrn	20333	20365	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	20333	20365	66	+	.	.
scaffold36928	subtractBed	intrn	22429	22476	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	22429	22476	71	+	.	.
scaffold36928	subtractBed	intrn	25113	25137	.	+	.	Parent=CGI_10002193;
	scaffold36928	TRF	Tandem_Repeat	25113	25137	50	+	.	.
scaffold36936	subtractBed	intrn	6523	7078	.	-	.	Parent=CGI_10002182;
	scaffold36936	TRF	Tandem_Repeat	6523	7078	997	+	.	.
scaffold36936	subtractBed	intrn	10626	10790	.	-	.	Parent=CGI_10002182;
	scaffold36936	TRF	Tandem_Repeat	10626	10790	159	+	.	.
scaffold36936	subtractBed	intrn	15097	15618	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	DNA_Crypton	15097	15618	182	-	.	.
scaffold36936	subtractBed	intrn	15619	15975	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	DNA_Crypton	15619	15975	107	-	.	.
scaffold36936	subtractBed	intrn	14821	15573	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	DNA_Crypton	14821	15573	73	-	.	.
scaffold36936	subtractBed	intrn	18042	18434	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	LTR_Pao	18042	18434	55	-	.	.
scaffold36936	subtractBed	intrn	18234	18506	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	LTR_Pao	18234	18506	28	-	.	.
scaffold36936	subtractBed	intrn	17375	17881	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	LTR_Pao	17375	17881	283	-	.	.
scaffold36936	subtractBed	intrn	17384	17992	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	LTR_Pao	17384	17992	37	-	.	.
scaffold36936	subtractBed	intrn	23613	24632	.	-	.	Parent=CGI_10002182;
	scaffold36936	WUBlastX	DNA_Maverick	23613	24632	582	-	.	.
scaffold36998	subtractBed	intrn	37435	37700	.	+	.	Parent=CGI_10002247;
	scaffold36998	WUBlastX	LINE_L1	37296	37700	28	+	.	.
scaffold37	subtractBed	intrn	67146	67472	.	+	.	Parent=CGI_10010344;
	scaffold37	TRF	Tandem_Repeat	67146	67472	166	+	.	.
scaffold37	subtractBed	intrn	67516	67642	.	+	.	Parent=CGI_10010344;
	scaffold37	TRF	Tandem_Repeat	67516	67642	87	+	.	.
scaffold37	subtractBed	intrn	69710	69757	.	+	.	Parent=CGI_10010344;
	scaffold37	TRF	Tandem_Repeat	69710	69757	96	+	.	.
scaffold37	subtractBed	intrn	69755	69799	.	+	.	Parent=CGI_10010344;
	scaffold37	TRF	Tandem_Repeat	69755	69799	90	+	.	.
scaffold37	subtractBed	intrn	183851	183899	.	+	.	Parent=CGI_10010346;
	scaffold37	TRF	Tandem_Repeat	183851	183899	80	+	.	.
scaffold37	subtractBed	intrn	183897	183933	.	+	.	Parent=CGI_10010346;
	scaffold37	TRF	Tandem_Repeat	183897	183933	74	+	.	.
scaffold37	subtractBed	intrn	191743	191821	.	+	.	Parent=CGI_10010346;
	scaffold37	TRF	Tandem_Repeat	191743	191821	158	+	.	.
scaffold37	subtractBed	intrn	191852	191894	.	+	.	Parent=CGI_10010346;
	scaffold37	TRF	Tandem_Repeat	191852	191894	77	+	.	.
scaffold370	subtractBed	intrn	56867	57195	.	-	.	Parent=CGI_10025517;
	scaffold370	TRF	Tandem_Repeat	56867	57195	378	+	.	.
scaffold370	subtractBed	intrn	61134	61193	.	-	.	Parent=CGI_10025517;
	scaffold370	WUBlastX	DNA_TcMar-Marin	61134	61193	30	+	.	.
scaffold370	subtractBed	intrn	61198	61380	.	-	.	Parent=CGI_10025517;
	scaffold370	WUBlastX	DNA_TcMar-Marin	61198	61380	23	+	.	.
scaffold370	subtractBed	intrn	65989	66957	.	-	.	Parent=CGI_10025517;
	scaffold370	WUBlastX	LINE_L1-Tx1	65989	66957	91	-	.	.
scaffold370	subtractBed	intrn	121472	121510	.	-	.	Parent=CGI_10025524;
	scaffold370	WUBlastX	LTR_Gypsy	121472	121615	69	-	.	.
scaffold370	subtractBed	intrn	175840	175879	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	175840	175879	80	+	.	.
scaffold370	subtractBed	intrn	178409	178464	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	178409	178464	58	+	.	.
scaffold370	subtractBed	intrn	178405	178464	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	178405	178464	75	+	.	.
scaffold370	subtractBed	intrn	184025	184116	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	184025	184116	130	+	.	.
scaffold370	subtractBed	intrn	184194	184353	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	184194	184353	169	+	.	.
scaffold370	subtractBed	intrn	184519	184612	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	184519	184612	127	+	.	.
scaffold370	subtractBed	intrn	186521	187263	.	-	.	Parent=CGI_10025527;
	scaffold370	TRF	Tandem_Repeat	186521	187263	950	+	.	.
scaffold370	subtractBed	intrn	188248	188574	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188248	188574	40	-	.	.
scaffold370	subtractBed	intrn	188182	188448	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188182	188448	40	-	.	.
scaffold370	subtractBed	intrn	188290	188448	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188290	188448	67	-	.	.
scaffold370	subtractBed	intrn	188534	188707	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188534	188707	25	-	.	.
scaffold370	subtractBed	intrn	188534	188659	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188534	188659	35	-	.	.
scaffold370	subtractBed	intrn	188290	188487	.	-	.	Parent=CGI_10025527;
	scaffold370	WUBlastX	LINE_RTE-X	188290	188487	51	-	.	.
scaffold370	subtractBed	intrn	213798	214058	.	+	.	Parent=CGI_10025528;
	scaffold370	WUBlastX	LINE_RTE-X	213798	214058	59	+	.	.
scaffold370	subtractBed	intrn	213798	214058	.	-	.	Parent=CGI_10025529;
	scaffold370	WUBlastX	LINE_RTE-X	213798	214058	59	+	.	.
scaffold370	subtractBed	intrn	219943	220331	.	-	.	Parent=CGI_10025529;
	scaffold370	TRF	Tandem_Repeat	219943	220331	231	+	.	.
scaffold370	subtractBed	intrn	220009	220359	.	-	.	Parent=CGI_10025529;
	scaffold370	TRF	Tandem_Repeat	220009	220359	531	+	.	.
scaffold370	subtractBed	intrn	306724	306792	.	+	.	Parent=CGI_10025534;
	scaffold370	TRF	Tandem_Repeat	306724	306792	57	+	.	.
scaffold370	subtractBed	intrn	306724	306792	.	-	.	Parent=CGI_10025535;
	scaffold370	TRF	Tandem_Repeat	306724	306792	57	+	.	.
scaffold370	subtractBed	intrn	369938	369991	.	-	.	Parent=CGI_10025540;
	scaffold370	TRF	Tandem_Repeat	369938	369991	54	+	.	.
scaffold370	subtractBed	intrn	426707	426747	.	-	.	Parent=CGI_10025541;
	scaffold370	TRF	Tandem_Repeat	426707	426747	82	+	.	.
scaffold370	subtractBed	intrn	437280	438276	.	+	.	Parent=CGI_10025542;
	scaffold370	TRF	Tandem_Repeat	437280	438276	873	+	.	.
scaffold370	subtractBed	intrn	447613	448955	.	+	.	Parent=CGI_10025542;
	scaffold370	TRF	Tandem_Repeat	447613	448955	1872	+	.	.
scaffold370	subtractBed	intrn	487985	488015	.	+	.	Parent=CGI_10025545;
	scaffold370	TRF	Tandem_Repeat	487985	488015	62	+	.	.
scaffold370	subtractBed	intrn	503090	503130	.	+	.	Parent=CGI_10025547;
	scaffold370	TRF	Tandem_Repeat	503090	503130	82	+	.	.
scaffold370	subtractBed	intrn	574243	574273	.	+	.	Parent=CGI_10025550;
	scaffold370	TRF	Tandem_Repeat	574243	574273	62	+	.	.
scaffold370	subtractBed	intrn	607285	607426	.	-	.	Parent=CGI_10025554;
	scaffold370	TRF	Tandem_Repeat	607285	607426	207	+	.	.
scaffold370	subtractBed	intrn	638084	638633	.	-	.	Parent=CGI_10025557;
	scaffold370	TRF	Tandem_Repeat	638084	638633	712	+	.	.
scaffold370	subtractBed	intrn	663593	663632	.	+	.	Parent=CGI_10025558;
	scaffold370	TRF	Tandem_Repeat	663593	663632	80	+	.	.
scaffold370	subtractBed	intrn	739630	739667	.	+	.	Parent=CGI_10025564;
	scaffold370	TRF	Tandem_Repeat	739630	739667	51	+	.	.
scaffold370	subtractBed	intrn	839648	840127	.	+	.	Parent=CGI_10025566;
	scaffold370	WUBlastX	LINE_L1-Tx1	839648	840127	65	-	.	.
scaffold370	subtractBed	intrn	844867	845955	.	+	.	Parent=CGI_10025566;
	scaffold370	WUBlastX	DNA_hAT-hATw	844867	845955	185	+	.	.
scaffold370	subtractBed	intrn	843845	844747	.	+	.	Parent=CGI_10025566;
	scaffold370	WUBlastX	DNA_hAT-hATw	843845	844747	34	+	.	.
scaffold370	subtractBed	intrn	843776	844513	.	+	.	Parent=CGI_10025566;
	scaffold370	WUBlastX	DNA_hAT-hATw	843776	844513	60	+	.	.
scaffold370	subtractBed	intrn	843596	844513	.	+	.	Parent=CGI_10025566;
	scaffold370	WUBlastX	DNA_hAT-hATw	843596	844513	33	+	.	.
scaffold370	subtractBed	intrn	885155	886115	.	+	.	Parent=CGI_10025567;
	scaffold370	TRF	Tandem_Repeat	885155	886115	1062	+	.	.
scaffold370	subtractBed	intrn	911785	912042	.	+	.	Parent=CGI_10025569;
	scaffold370	TRF	Tandem_Repeat	911785	912042	399	+	.	.
scaffold370	subtractBed	intrn	912242	912576	.	+	.	Parent=CGI_10025569;
	scaffold370	TRF	Tandem_Repeat	912242	912576	301	+	.	.
scaffold370	subtractBed	intrn	933199	933240	.	+	.	Parent=CGI_10025570;
	scaffold370	TRF	Tandem_Repeat	933199	933240	66	+	.	.
scaffold370	subtractBed	intrn	939426	939642	.	+	.	Parent=CGI_10025570;
	scaffold370	TRF	Tandem_Repeat	939426	939642	133	+	.	.
scaffold370	subtractBed	intrn	945867	945927	.	+	.	Parent=CGI_10025570;
	scaffold370	TRF	Tandem_Repeat	945867	945927	122	+	.	.
scaffold370	subtractBed	intrn	949643	949673	.	+	.	Parent=CGI_10025570;
	scaffold370	TRF	Tandem_Repeat	949643	949673	62	+	.	.
scaffold370	subtractBed	intrn	968350	968377	.	+	.	Parent=CGI_10025571;
	scaffold370	TRF	Tandem_Repeat	968350	968377	56	+	.	.
scaffold370	subtractBed	intrn	989134	989225	.	-	.	Parent=CGI_10025574;
	scaffold370	TRF	Tandem_Repeat	989134	989225	148	+	.	.
scaffold370	subtractBed	intrn	989134	989225	.	-	.	Parent=CGI_10025574;
	scaffold370	TRF	Tandem_Repeat	989134	989225	152	+	.	.
scaffold370	subtractBed	intrn	990715	990762	.	-	.	Parent=CGI_10025574;
	scaffold370	TRF	Tandem_Repeat	990715	990762	62	+	.	.
scaffold370	subtractBed	intrn	991501	991556	.	-	.	Parent=CGI_10025574;
	scaffold370	TRF	Tandem_Repeat	991501	991556	71	+	.	.
scaffold370	subtractBed	intrn	991499	991552	.	-	.	Parent=CGI_10025574;
	scaffold370	TRF	Tandem_Repeat	991499	991552	63	+	.	.
scaffold370	subtractBed	intrn	1000169	1000214	.	-	.	Parent=CGI_10025575;
	scaffold370	TRF	Tandem_Repeat	1000169	1000214	92	+	.	.
scaffold370	subtractBed	intrn	1000260	1000298	.	-	.	Parent=CGI_10025575;
	scaffold370	TRF	Tandem_Repeat	1000260	1000298	78	+	.	.
scaffold370	subtractBed	intrn	1000585	1000645	.	-	.	Parent=CGI_10025575;
	scaffold370	TRF	Tandem_Repeat	1000585	1000645	122	+	.	.
scaffold370	subtractBed	intrn	1017199	1017239	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1017199	1017239	82	+	.	.
scaffold370	subtractBed	intrn	1026282	1026762	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1026282	1026762	671	+	.	.
scaffold370	subtractBed	intrn	1027983	1028229	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1027983	1028229	377	+	.	.
scaffold370	subtractBed	intrn	1028664	1028710	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1028664	1028710	94	+	.	.
scaffold370	subtractBed	intrn	1028726	1028867	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1028726	1028867	167	+	.	.
scaffold370	subtractBed	intrn	1028728	1028885	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1028728	1028885	133	+	.	.
scaffold370	subtractBed	intrn	1028983	1029209	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1028983	1029209	274	+	.	.
scaffold370	subtractBed	intrn	1030034	1030085	.	-	.	Parent=CGI_10025577;
	scaffold370	TRF	Tandem_Repeat	1030034	1030085	50	+	.	.
scaffold370	subtractBed	intrn	1027983	1028229	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1027983	1028229	377	+	.	.
scaffold370	subtractBed	intrn	1028664	1028710	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1028664	1028710	94	+	.	.
scaffold370	subtractBed	intrn	1028726	1028867	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1028726	1028867	167	+	.	.
scaffold370	subtractBed	intrn	1028728	1028885	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1028728	1028885	133	+	.	.
scaffold370	subtractBed	intrn	1028983	1029209	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1028983	1029209	274	+	.	.
scaffold370	subtractBed	intrn	1030034	1030085	.	+	.	Parent=CGI_10025578;
	scaffold370	TRF	Tandem_Repeat	1030034	1030085	50	+	.	.
scaffold370	subtractBed	intrn	1040474	1040512	.	+	.	Parent=CGI_10025579;
	scaffold370	TRF	Tandem_Repeat	1040474	1040512	78	+	.	.
scaffold370	subtractBed	intrn	1041607	1041669	.	+	.	Parent=CGI_10025579;
	scaffold370	TRF	Tandem_Repeat	1041607	1041669	117	+	.	.
scaffold370	subtractBed	intrn	1041731	1041778	.	+	.	Parent=CGI_10025579;
	scaffold370	TRF	Tandem_Repeat	1041731	1041778	87	+	.	.
scaffold370	subtractBed	intrn	1055736	1055793	.	+	.	Parent=CGI_10025579;
	scaffold370	TRF	Tandem_Repeat	1055736	1055793	116	+	.	.
scaffold370	subtractBed	intrn	1084937	1084971	.	-	.	Parent=CGI_10025580;
	scaffold370	TRF	Tandem_Repeat	1084937	1084971	52	+	.	.
scaffold37002	subtractBed	intrn	21701	21733	.	-	.	Parent=CGI_10002232;
	scaffold37002	TRF	Tandem_Repeat	21701	21733	66	+	.	.
scaffold37002	subtractBed	intrn	30002	30045	.	-	.	Parent=CGI_10002233;
	scaffold37002	TRF	Tandem_Repeat	30002	30045	88	+	.	.
scaffold37006	subtractBed	intrn	22665	22694	.	+	.	Parent=CGI_10002223;
	scaffold37006	TRF	Tandem_Repeat	22665	22694	51	+	.	.
scaffold37006	subtractBed	intrn	26561	26830	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LTR_DIRS	26561	26830	100	-	.	.
scaffold37006	subtractBed	intrn	26832	27212	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LTR_DIRS	26832	27212	245	-	.	.
scaffold37006	subtractBed	intrn	27337	27483	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LTR_DIRS	27337	27483	41	-	.	.
scaffold37006	subtractBed	intrn	26832	27305	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LTR_DIRS	26832	27305	210	-	.	.
scaffold37006	subtractBed	intrn	31101	31427	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LINE_L2	31101	31427	54	-	.	.
scaffold37006	subtractBed	intrn	31501	33852	.	+	.	Parent=CGI_10002223;
	scaffold37006	WUBlastX	LINE_CR1-L2	31501	33852	831	-	.	.
scaffold37010	subtractBed	intrn	8275	8321	.	-	.	Parent=CGI_10002195;
	scaffold37010	TRF	Tandem_Repeat	8275	8321	94	+	.	.
scaffold37010	subtractBed	intrn	10564	10606	.	+	.	Parent=CGI_10002196;
	scaffold37010	TRF	Tandem_Repeat	10564	10606	86	+	.	.
scaffold37010	subtractBed	intrn	30964	31089	.	+	.	Parent=CGI_10002196;
	scaffold37010	WUBlastX	LTR_DIRS	30964	31089	49	-	.	.
scaffold37010	subtractBed	intrn	30925	31092	.	+	.	Parent=CGI_10002196;
	scaffold37010	WUBlastX	LTR_DIRS	30925	31092	49	-	.	.
scaffold37010	subtractBed	intrn	31240	31632	.	+	.	Parent=CGI_10002196;
	scaffold37010	WUBlastX	LTR_DIRS	31240	31632	91	-	.	.
scaffold37010	subtractBed	intrn	31735	31896	.	+	.	Parent=CGI_10002196;
	scaffold37010	WUBlastX	LTR_DIRS	31735	31896	22	-	.	.
scaffold37032	subtractBed	intrn	33487	33526	.	-	.	Parent=CGI_10002246;
	scaffold37032	TRF	Tandem_Repeat	33487	33526	80	+	.	.
scaffold37032	subtractBed	intrn	37121	37328	.	-	.	Parent=CGI_10002246;
	scaffold37032	TRF	Tandem_Repeat	37121	37363	159	+	.	.
scaffold37046	subtractBed	intrn	13540	13604	.	-	.	Parent=CGI_10002257;
	scaffold37046	TRF	Tandem_Repeat	13540	13604	107	+	.	.
scaffold37046	subtractBed	intrn	29994	30062	.	-	.	Parent=CGI_10002257;
	scaffold37046	TRF	Tandem_Repeat	29994	30062	54	+	.	.
scaffold37064	subtractBed	intrn	7009	7138	.	+	.	Parent=CGI_10002258;
	scaffold37064	TRF	Tandem_Repeat	7009	7138	63	+	.	.
scaffold37064	subtractBed	intrn	19224	19282	.	+	.	Parent=CGI_10002258;
	scaffold37064	TRF	Tandem_Repeat	19224	19282	63	+	.	.
scaffold37064	subtractBed	intrn	28140	28189	.	-	.	Parent=CGI_10002260;
	scaffold37064	TRF	Tandem_Repeat	28140	28189	91	+	.	.
scaffold37064	subtractBed	intrn	27298	27891	.	-	.	Parent=CGI_10002260;
	scaffold37064	WUBlastX	DNA_Kolobok-Hyd	27094	27891	52	-	.	.
scaffold37092	subtractBed	intrn	3347	3385	.	+	.	Parent=CGI_10002286;
	scaffold37092	TRF	Tandem_Repeat	3347	3385	62	+	.	.
scaffold37092	subtractBed	intrn	3744	3797	.	+	.	Parent=CGI_10002286;
	scaffold37092	TRF	Tandem_Repeat	3744	3797	108	+	.	.
scaffold37092	subtractBed	intrn	3797	3840	.	+	.	Parent=CGI_10002286;
	scaffold37092	TRF	Tandem_Repeat	3797	3840	88	+	.	.
scaffold37092	subtractBed	intrn	3946	3986	.	+	.	Parent=CGI_10002286;
	scaffold37092	TRF	Tandem_Repeat	3946	3986	82	+	.	.
scaffold37134	subtractBed	intrn	25181	25234	.	+	.	Parent=CGI_10002292;
	scaffold37134	TRF	Tandem_Repeat	25181	25234	99	+	.	.
scaffold37134	subtractBed	intrn	28608	29951	.	+	.	Parent=CGI_10002292;
	scaffold37134	TRF	Tandem_Repeat	28608	29951	1219	+	.	.
scaffold37134	subtractBed	intrn	31857	31888	.	+	.	Parent=CGI_10002292;
	scaffold37134	TRF	Tandem_Repeat	31857	31888	57	+	.	.
scaffold37148	subtractBed	intrn	9638	9695	.	-	.	Parent=CGI_10002291;
	scaffold37148	TRF	Tandem_Repeat	9638	9695	107	+	.	.
scaffold37148	subtractBed	intrn	10988	11209	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	10988	11209	41	+	.	.
scaffold37148	subtractBed	intrn	12533	12868	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_L1-Tx1	12533	12868	62	+	.	.
scaffold37148	subtractBed	intrn	10384	10992	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	10384	10992	44	+	.	.
scaffold37148	subtractBed	intrn	11030	11209	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	11030	11209	69	+	.	.
scaffold37148	subtractBed	intrn	16859	16955	.	-	.	Parent=CGI_10002291;
	scaffold37148	TRF	Tandem_Repeat	16859	16955	126	+	.	.
scaffold37148	subtractBed	intrn	17890	18078	.	-	.	Parent=CGI_10002291;
	scaffold37148	TRF	Tandem_Repeat	17890	18078	272	+	.	.
scaffold37148	subtractBed	intrn	16185	16589	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	DNA_Harbinger	16185	16589	187	-	.	.
scaffold37148	subtractBed	intrn	29710	29823	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	29710	29823	41	+	.	.
scaffold37148	subtractBed	intrn	28863	29117	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	28863	29117	58	+	.	.
scaffold37148	subtractBed	intrn	29599	29736	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	29599	29736	32	+	.	.
scaffold37148	subtractBed	intrn	29713	29874	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	29713	29874	27	+	.	.
scaffold37148	subtractBed	intrn	28044	28175	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	28044	28175	21	+	.	.
scaffold37148	subtractBed	intrn	28857	29402	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	28857	29402	38	+	.	.
scaffold37148	subtractBed	intrn	29429	29527	.	-	.	Parent=CGI_10002291;
	scaffold37148	WUBlastX	LINE_RTE-BovB	29429	29527	21	+	.	.
scaffold372	subtractBed	intrn	6456	6575	.	-	.	Parent=CGI_10009690;
	scaffold372	TRF	Tandem_Repeat	6456	6575	213	+	.	.
scaffold372	subtractBed	intrn	43725	43790	.	+	.	Parent=CGI_10009695;
	scaffold372	TRF	Tandem_Repeat	43725	43790	57	+	.	.
scaffold372	subtractBed	intrn	44674	44719	.	+	.	Parent=CGI_10009695;
	scaffold372	TRF	Tandem_Repeat	44674	44719	92	+	.	.
scaffold372	subtractBed	intrn	56898	57133	.	-	.	Parent=CGI_10009696;
	scaffold372	TRF	Tandem_Repeat	56898	57133	309	+	.	.
scaffold372	subtractBed	intrn	57946	57982	.	-	.	Parent=CGI_10009696;
	scaffold372	TRF	Tandem_Repeat	57946	57982	74	+	.	.
scaffold372	subtractBed	intrn	132089	132145	.	+	.	Parent=CGI_10009701;
	scaffold372	TRF	Tandem_Repeat	132089	132145	114	+	.	.
scaffold372	subtractBed	intrn	134074	134117	.	+	.	Parent=CGI_10009701;
	scaffold372	TRF	Tandem_Repeat	134074	134117	88	+	.	.
scaffold372	subtractBed	intrn	132089	132145	.	-	.	Parent=CGI_10009702;
	scaffold372	TRF	Tandem_Repeat	132089	132145	114	+	.	.
scaffold372	subtractBed	intrn	134074	134117	.	-	.	Parent=CGI_10009702;
	scaffold372	TRF	Tandem_Repeat	134074	134117	88	+	.	.
scaffold372	subtractBed	intrn	182418	182456	.	-	.	Parent=CGI_10009709;
	scaffold372	TRF	Tandem_Repeat	182418	182456	62	+	.	.
scaffold372	subtractBed	intrn	205989	206018	.	+	.	Parent=CGI_10009712;
	scaffold372	TRF	Tandem_Repeat	205989	206018	53	+	.	.
scaffold372	subtractBed	intrn	207109	207175	.	+	.	Parent=CGI_10009712;
	scaffold372	TRF	Tandem_Repeat	207109	207175	91	+	.	.
scaffold372	subtractBed	intrn	207117	207166	.	+	.	Parent=CGI_10009712;
	scaffold372	TRF	Tandem_Repeat	207117	207166	82	+	.	.
scaffold372	subtractBed	intrn	233123	233185	.	-	.	Parent=CGI_10009714;
	scaffold372	TRF	Tandem_Repeat	233123	233185	126	+	.	.
scaffold37206	subtractBed	intrn	11475	11527	.	+	.	Parent=CGI_10002305;
	scaffold37206	TRF	Tandem_Repeat	11475	11527	54	+	.	.
scaffold37206	subtractBed	intrn	14884	15117	.	+	.	Parent=CGI_10002305;
	scaffold37206	WUBlastX	DNA_Merlin	14884	15117	110	-	.	.
scaffold37206	subtractBed	intrn	16603	17369	.	+	.	Parent=CGI_10002305;
	scaffold37206	TRF	Tandem_Repeat	16603	17369	1037	+	.	.
scaffold37206	subtractBed	intrn	18541	19368	.	+	.	Parent=CGI_10002305;
	scaffold37206	TRF	Tandem_Repeat	18541	19368	1014	+	.	.
scaffold37286	subtractBed	intrn	26039	26103	.	+	.	Parent=CGI_10002324;
	scaffold37286	TRF	Tandem_Repeat	26039	26103	130	+	.	.
scaffold37286	subtractBed	intrn	30328	30354	.	+	.	Parent=CGI_10002324;
	scaffold37286	TRF	Tandem_Repeat	30328	30354	54	+	.	.
scaffold37286	subtractBed	intrn	31119	31161	.	+	.	Parent=CGI_10002324;
	scaffold37286	TRF	Tandem_Repeat	31119	31161	86	+	.	.
scaffold37286	subtractBed	intrn	31228	31254	.	+	.	Parent=CGI_10002324;
	scaffold37286	TRF	Tandem_Repeat	31228	31254	54	+	.	.
scaffold37344	subtractBed	intrn	9146	9178	.	+	.	Parent=CGI_10002330;
	scaffold37344	TRF	Tandem_Repeat	9146	9178	66	+	.	.
scaffold37344	subtractBed	intrn	24713	24765	.	+	.	Parent=CGI_10002332;
	scaffold37344	TRF	Tandem_Repeat	24713	24765	106	+	.	.
scaffold37344	subtractBed	intrn	24962	25016	.	+	.	Parent=CGI_10002332;
	scaffold37344	TRF	Tandem_Repeat	24962	25016	110	+	.	.
scaffold37344	subtractBed	intrn	26222	26248	.	+	.	Parent=CGI_10002332;
	scaffold37344	TRF	Tandem_Repeat	26222	26248	54	+	.	.
scaffold37344	subtractBed	intrn	26987	27016	.	+	.	Parent=CGI_10002332;
	scaffold37344	TRF	Tandem_Repeat	26987	27016	60	+	.	.
scaffold37344	subtractBed	intrn	34709	34746	.	+	.	Parent=CGI_10002332;
	scaffold37344	TRF	Tandem_Repeat	34709	34746	67	+	.	.
scaffold37358	subtractBed	intrn	11634	11688	.	-	.	Parent=CGI_10002325;
	scaffold37358	TRF	Tandem_Repeat	11634	11688	110	+	.	.
scaffold37358	subtractBed	intrn	16088	16306	.	+	.	Parent=CGI_10002326;
	scaffold37358	TRF	Tandem_Repeat	16088	16306	303	+	.	.
scaffold37358	subtractBed	intrn	16171	16353	.	+	.	Parent=CGI_10002326;
	scaffold37358	TRF	Tandem_Repeat	16171	16353	87	+	.	.
scaffold37358	subtractBed	intrn	17958	18005	.	+	.	Parent=CGI_10002326;
	scaffold37358	TRF	Tandem_Repeat	17958	18005	96	+	.	.
scaffold37358	subtractBed	intrn	22313	22353	.	+	.	Parent=CGI_10002326;
	scaffold37358	TRF	Tandem_Repeat	22313	22353	73	+	.	.
scaffold37358	subtractBed	intrn	22313	22354	.	+	.	Parent=CGI_10002326;
	scaffold37358	TRF	Tandem_Repeat	22313	22354	57	+	.	.
scaffold37386	subtractBed	intrn	12147	12837	.	+	.	Parent=CGI_10002339;
	scaffold37386	TRF	Tandem_Repeat	12120	12837	1149	+	.	.
scaffold374	subtractBed	intrn	57841	57889	.	+	.	Parent=CGI_10018717;
	scaffold374	TRF	Tandem_Repeat	57841	57889	98	+	.	.
scaffold374	subtractBed	intrn	55887	56090	.	+	.	Parent=CGI_10018717;
	scaffold374	WUBlastX	LINE_L1-Tx1	55887	56090	56	+	.	.
scaffold374	subtractBed	intrn	166335	166550	.	-	.	Parent=CGI_10018719;
	scaffold374	WUBlastX	DNA_hAT-Tip100	166335	166550	58	-	.	.
scaffold374	subtractBed	intrn	166640	166855	.	-	.	Parent=CGI_10018719;
	scaffold374	WUBlastX	DNA_hAT-Tip100	166640	166855	102	-	.	.
scaffold374	subtractBed	intrn	166679	166951	.	-	.	Parent=CGI_10018719;
	scaffold374	WUBlastX	DNA_hAT-Tip100	166679	166951	45	-	.	.
scaffold374	subtractBed	intrn	167048	167818	.	-	.	Parent=CGI_10018719;
	scaffold374	WUBlastX	DNA_hAT-Tip100	167048	167818	142	-	.	.
scaffold374	subtractBed	intrn	405976	406953	.	-	.	Parent=CGI_10018724;
	scaffold374	WUBlastX	LINE_RTE-BovB	405976	406953	158	+	.	.
scaffold374	subtractBed	intrn	407594	407744	.	-	.	Parent=CGI_10018724;
	scaffold374	TRF	Tandem_Repeat	407594	407744	225	+	.	.
scaffold374	subtractBed	intrn	411040	411078	.	-	.	Parent=CGI_10018724;
	scaffold374	TRF	Tandem_Repeat	411040	411078	78	+	.	.
scaffold374	subtractBed	intrn	411180	411220	.	-	.	Parent=CGI_10018724;
	scaffold374	TRF	Tandem_Repeat	411180	411220	82	+	.	.
scaffold374	subtractBed	intrn	518418	518475	.	+	.	Parent=CGI_10018726;
	scaffold374	TRF	Tandem_Repeat	518418	518475	116	+	.	.
scaffold374	subtractBed	intrn	524915	524955	.	+	.	Parent=CGI_10018726;
	scaffold374	TRF	Tandem_Repeat	524915	524955	57	+	.	.
scaffold374	subtractBed	intrn	538908	538968	.	+	.	Parent=CGI_10018726;
	scaffold374	TRF	Tandem_Repeat	538908	538968	50	+	.	.
scaffold374	subtractBed	intrn	551318	551721	.	-	.	Parent=CGI_10018727;
	scaffold374	TRF	Tandem_Repeat	551318	551721	151	+	.	.
scaffold374	subtractBed	intrn	551346	552438	.	-	.	Parent=CGI_10018727;
	scaffold374	TRF	Tandem_Repeat	551346	552438	497	+	.	.
scaffold374	subtractBed	intrn	551746	552438	.	-	.	Parent=CGI_10018727;
	scaffold374	TRF	Tandem_Repeat	551746	552438	430	+	.	.
scaffold374	subtractBed	intrn	551793	551868	.	-	.	Parent=CGI_10018727;
	scaffold374	TRF	Tandem_Repeat	551793	551868	52	+	.	.
scaffold37424	subtractBed	intrn	15773	15774	.	-	.	Parent=CGI_10002371;
	scaffold37424	WUBlastX	DNA_Harbinger	15773	15868	25	-	.	.
scaffold37430	subtractBed	intrn	26545	26581	.	+	.	Parent=CGI_10002358;
	scaffold37430	TRF	Tandem_Repeat	26545	26581	56	+	.	.
scaffold37430	subtractBed	intrn	40482	40640	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	40482	40640	123	-	.	.
scaffold37430	subtractBed	intrn	41134	41742	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	41134	41742	142	-	.	.
scaffold37430	subtractBed	intrn	40634	41149	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	40634	41149	225	-	.	.
scaffold37430	subtractBed	intrn	40634	41521	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	40634	41521	214	-	.	.
scaffold37430	subtractBed	intrn	38217	38474	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38217	38474	229	-	.	.
scaffold37430	subtractBed	intrn	37967	38206	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	37967	38206	34	-	.	.
scaffold37430	subtractBed	intrn	38082	38456	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38082	38456	141	-	.	.
scaffold37430	subtractBed	intrn	38473	40479	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38473	40479	463	-	.	.
scaffold37430	subtractBed	intrn	38048	38206	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38048	38206	79	-	.	.
scaffold37430	subtractBed	intrn	40048	40560	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	40048	40560	218	-	.	.
scaffold37430	subtractBed	intrn	38154	38459	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38154	38459	205	-	.	.
scaffold37430	subtractBed	intrn	38473	39795	.	+	.	Parent=CGI_10002358;
	scaffold37430	WUBlastX	LTR_Pao	38473	39795	579	-	.	.
scaffold37436	subtractBed	intrn	11081	11139	.	+	.	Parent=CGI_10002379;
	scaffold37436	TRF	Tandem_Repeat	11081	11139	118	+	.	.
scaffold37436	subtractBed	intrn	12349	13350	.	+	.	Parent=CGI_10002379;
	scaffold37436	WUBlastX	DNA_TcMar-Tc1	12349	13350	458	-	.	.
scaffold37436	subtractBed	intrn	17249	17290	.	+	.	Parent=CGI_10002379;
	scaffold37436	TRF	Tandem_Repeat	17249	17290	84	+	.	.
scaffold37472	subtractBed	intrn	3289	4071	.	+	.	Parent=CGI_10002390;
	scaffold37472	TRF	Tandem_Repeat	3289	4071	1086	+	.	.
scaffold37472	subtractBed	intrn	4539	4878	.	+	.	Parent=CGI_10002390;
	scaffold37472	TRF	Tandem_Repeat	4539	4878	353	+	.	.
scaffold37472	subtractBed	intrn	5342	6004	.	+	.	Parent=CGI_10002390;
	scaffold37472	TRF	Tandem_Repeat	5342	6004	790	+	.	.
scaffold37472	subtractBed	intrn	6466	6805	.	+	.	Parent=CGI_10002390;
	scaffold37472	TRF	Tandem_Repeat	6466	6805	355	+	.	.
scaffold37472	subtractBed	intrn	23043	23110	.	+	.	Parent=CGI_10002390;
	scaffold37472	TRF	Tandem_Repeat	23043	23110	136	+	.	.
scaffold37472	subtractBed	intrn	29614	29617	.	+	.	Parent=CGI_10002390;
	scaffold37472	WUBlastX	LINE_CR1	29614	29694	56	+	.	.
scaffold37472	subtractBed	intrn	29596	29617	.	+	.	Parent=CGI_10002390;
	scaffold37472	WUBlastX	LINE_CR1	29596	29694	44	+	.	.
scaffold37500	subtractBed	intrn	3316	3409	.	-	.	Parent=CGI_10002381;
	scaffold37500	TRF	Tandem_Repeat	3316	3409	120	+	.	.
scaffold37500	subtractBed	intrn	25047	25140	.	-	.	Parent=CGI_10002382;
	scaffold37500	TRF	Tandem_Repeat	25047	25140	118	+	.	.
scaffold37500	subtractBed	intrn	25760	25855	.	-	.	Parent=CGI_10002382;
	scaffold37500	TRF	Tandem_Repeat	25760	25855	75	+	.	.
scaffold37500	subtractBed	intrn	29889	30452	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_CR1-L2	29889	30452	54	-	.	.
scaffold37500	subtractBed	intrn	27306	28184	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_L2	27306	28184	479	-	.	.
scaffold37500	subtractBed	intrn	28172	28699	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_L2	28172	28699	321	-	.	.
scaffold37500	subtractBed	intrn	28678	29166	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_L2	28678	29166	277	-	.	.
scaffold37500	subtractBed	intrn	29154	30365	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_L2	29154	30365	464	-	.	.
scaffold37500	subtractBed	intrn	26760	26795	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_RTE-X	26760	26795	22	-	.	.
scaffold37500	subtractBed	intrn	31698	31752	.	-	.	Parent=CGI_10002382;
	scaffold37500	WUBlastX	LINE_L2	31366	31752	92	-	.	.
scaffold37500	subtractBed	intrn	32836	32886	.	-	.	Parent=CGI_10002382;
	scaffold37500	TRF	Tandem_Repeat	32836	32886	102	+	.	.
scaffold37500	subtractBed	intrn	33328	33401	.	-	.	Parent=CGI_10002382;
	scaffold37500	TRF	Tandem_Repeat	33328	33401	148	+	.	.
scaffold37508	subtractBed	intrn	18510	18546	.	-	.	Parent=CGI_10002397;
	scaffold37508	TRF	Tandem_Repeat	18510	18546	74	+	.	.
scaffold37508	subtractBed	intrn	22590	22632	.	-	.	Parent=CGI_10002397;
	scaffold37508	TRF	Tandem_Repeat	22590	22632	50	+	.	.
scaffold37508	subtractBed	intrn	22595	22637	.	-	.	Parent=CGI_10002397;
	scaffold37508	TRF	Tandem_Repeat	22595	22637	50	+	.	.
scaffold37532	subtractBed	intrn	32395	32640	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	32395	32640	128	-	.	.
scaffold37532	subtractBed	intrn	31671	32123	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	31671	32123	77	-	.	.
scaffold37532	subtractBed	intrn	31830	32144	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	31830	32144	192	-	.	.
scaffold37532	subtractBed	intrn	31746	32144	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	31746	32144	133	-	.	.
scaffold37532	subtractBed	intrn	32165	32374	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	32165	32374	126	-	.	.
scaffold37532	subtractBed	intrn	32395	32598	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	32395	32598	150	-	.	.
scaffold37532	subtractBed	intrn	32842	33687	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	32842	33687	79	-	.	.
scaffold37532	subtractBed	intrn	33073	33516	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	33073	33516	92	-	.	.
scaffold37532	subtractBed	intrn	32129	33166	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	32129	33166	94	-	.	.
scaffold37532	subtractBed	intrn	41150	41680	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	41150	41680	336	+	.	.
scaffold37532	subtractBed	intrn	41147	41917	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	41147	41917	142	+	.	.
scaffold37532	subtractBed	intrn	41497	42003	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	41497	42003	36	+	.	.
scaffold37532	subtractBed	intrn	41893	42111	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	LTR_Gypsy	41893	42111	21	+	.	.
scaffold37532	subtractBed	intrn	42912	43057	.	+	.	Parent=CGI_10002401;
	scaffold37532	WUBlastX	DNA_TcMar-Marin	42912	43196	52	-	.	.
scaffold37558	subtractBed	intrn	5720	5757	.	+	.	Parent=CGI_10002409;
	scaffold37558	TRF	Tandem_Repeat	5720	5757	67	+	.	.
scaffold37558	subtractBed	intrn	6681	6706	.	+	.	Parent=CGI_10002409;
	scaffold37558	TRF	Tandem_Repeat	6681	6706	52	+	.	.
scaffold37558	subtractBed	intrn	10415	10465	.	+	.	Parent=CGI_10002409;
	scaffold37558	TRF	Tandem_Repeat	10415	10465	88	+	.	.
scaffold37558	subtractBed	intrn	10641	10681	.	+	.	Parent=CGI_10002409;
	scaffold37558	TRF	Tandem_Repeat	10641	10681	73	+	.	.
scaffold37558	subtractBed	intrn	9352	9825	.	+	.	Parent=CGI_10002409;
	scaffold37558	WUBlastX	LTR_Gypsy	9352	9825	64	-	.	.
scaffold376	subtractBed	intrn	31117	31171	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	31117	31171	101	+	.	.
scaffold376	subtractBed	intrn	31220	31266	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	31220	31266	85	+	.	.
scaffold376	subtractBed	intrn	35535	35575	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	35535	35575	75	+	.	.
scaffold376	subtractBed	intrn	36958	36992	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	36958	36992	70	+	.	.
scaffold376	subtractBed	intrn	46617	46655	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	46617	46655	78	+	.	.
scaffold376	subtractBed	intrn	50720	50779	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	50720	50779	104	+	.	.
scaffold376	subtractBed	intrn	60627	60665	.	+	.	Parent=CGI_10019491;
	scaffold376	TRF	Tandem_Repeat	60627	60665	69	+	.	.
scaffold376	subtractBed	intrn	74551	74663	.	-	.	Parent=CGI_10019492;
	scaffold376	TRF	Tandem_Repeat	74551	74663	118	+	.	.
scaffold376	subtractBed	intrn	74601	74663	.	-	.	Parent=CGI_10019492;
	scaffold376	TRF	Tandem_Repeat	74601	74663	54	+	.	.
scaffold376	subtractBed	intrn	100700	100740	.	-	.	Parent=CGI_10019493;
	scaffold376	TRF	Tandem_Repeat	100700	100740	55	+	.	.
scaffold376	subtractBed	intrn	103936	104729	.	-	.	Parent=CGI_10019493;
	scaffold376	TRF	Tandem_Repeat	103936	104729	1156	+	.	.
scaffold376	subtractBed	intrn	218046	218094	.	-	.	Parent=CGI_10019497;
	scaffold376	TRF	Tandem_Repeat	218046	218094	98	+	.	.
scaffold376	subtractBed	intrn	220640	220677	.	-	.	Parent=CGI_10019497;
	scaffold376	TRF	Tandem_Repeat	220640	220677	76	+	.	.
scaffold376	subtractBed	intrn	305025	305293	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	305025	305293	160	+	.	.
scaffold376	subtractBed	intrn	305026	305293	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	305026	305293	208	+	.	.
scaffold376	subtractBed	intrn	309230	309306	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	309230	309306	145	+	.	.
scaffold376	subtractBed	intrn	311609	311660	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	311609	311660	97	+	.	.
scaffold376	subtractBed	intrn	311664	311702	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	311664	311702	78	+	.	.
scaffold376	subtractBed	intrn	315254	315305	.	+	.	Parent=CGI_10019505;
	scaffold376	TRF	Tandem_Repeat	315254	315305	104	+	.	.
scaffold376	subtractBed	intrn	352216	352297	.	-	.	Parent=CGI_10019508;
	scaffold376	TRF	Tandem_Repeat	352216	352297	56	+	.	.
scaffold376	subtractBed	intrn	352216	352378	.	-	.	Parent=CGI_10019508;
	scaffold376	TRF	Tandem_Repeat	352216	352378	69	+	.	.
scaffold376	subtractBed	intrn	352388	352530	.	-	.	Parent=CGI_10019508;
	scaffold376	TRF	Tandem_Repeat	352388	352530	150	+	.	.
scaffold376	subtractBed	intrn	376717	376781	.	+	.	Parent=CGI_10019510;
	scaffold376	TRF	Tandem_Repeat	376717	376781	121	+	.	.
scaffold376	subtractBed	intrn	380106	380148	.	+	.	Parent=CGI_10019510;
	scaffold376	TRF	Tandem_Repeat	380106	380148	59	+	.	.
scaffold376	subtractBed	intrn	382551	382617	.	+	.	Parent=CGI_10019510;
	scaffold376	TRF	Tandem_Repeat	382551	382617	134	+	.	.
scaffold376	subtractBed	intrn	390343	390430	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	390343	390430	176	+	.	.
scaffold376	subtractBed	intrn	391578	391651	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	391578	391651	57	+	.	.
scaffold376	subtractBed	intrn	391564	391651	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	391564	391651	85	+	.	.
scaffold376	subtractBed	intrn	391564	391651	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	391564	391651	51	+	.	.
scaffold376	subtractBed	intrn	391564	391651	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	391564	391651	97	+	.	.
scaffold376	subtractBed	intrn	392785	392851	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	392785	392851	91	+	.	.
scaffold376	subtractBed	intrn	394499	394547	.	+	.	Parent=CGI_10019511;
	scaffold376	TRF	Tandem_Repeat	394499	394547	89	+	.	.
scaffold376	subtractBed	intrn	463960	464165	.	+	.	Parent=CGI_10019513;
	scaffold376	TRF	Tandem_Repeat	463960	464165	369	+	.	.
scaffold376	subtractBed	intrn	484068	484184	.	-	.	Parent=CGI_10019515;
	scaffold376	TRF	Tandem_Repeat	484068	484184	110	+	.	.
scaffold376	subtractBed	intrn	484470	484641	.	-	.	Parent=CGI_10019515;
	scaffold376	TRF	Tandem_Repeat	484470	484641	148	+	.	.
scaffold376	subtractBed	intrn	528614	528741	.	-	.	Parent=CGI_10019517;
	scaffold376	TRF	Tandem_Repeat	528614	528752	154	+	.	.
scaffold376	subtractBed	intrn	546769	546817	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	546769	546817	98	+	.	.
scaffold376	subtractBed	intrn	548871	549096	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	548871	549096	416	+	.	.
scaffold376	subtractBed	intrn	549094	549614	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	549094	549614	943	+	.	.
scaffold376	subtractBed	intrn	550732	551110	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	550732	551110	200	+	.	.
scaffold376	subtractBed	intrn	550839	551109	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	550839	551109	156	+	.	.
scaffold376	subtractBed	intrn	551018	551292	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	551018	551292	199	+	.	.
scaffold376	subtractBed	intrn	551018	551292	.	-	.	Parent=CGI_10019519;
	scaffold376	TRF	Tandem_Repeat	551018	551292	271	+	.	.
scaffold37622	subtractBed	intrn	26424	26546	.	-	.	Parent=CGI_10002429;
	scaffold37622	WUBlastX	LINE_L2	26424	26546	59	+	.	.
scaffold37622	subtractBed	intrn	36323	36389	.	-	.	Parent=CGI_10002429;
	scaffold37622	TRF	Tandem_Repeat	36323	36389	89	+	.	.
scaffold37622	subtractBed	intrn	36902	36935	.	-	.	Parent=CGI_10002429;
	scaffold37622	TRF	Tandem_Repeat	36902	36935	68	+	.	.
scaffold37622	subtractBed	intrn	36933	36965	.	-	.	Parent=CGI_10002429;
	scaffold37622	TRF	Tandem_Repeat	36933	36965	66	+	.	.
scaffold37622	subtractBed	intrn	37153	37199	.	-	.	Parent=CGI_10002429;
	scaffold37622	TRF	Tandem_Repeat	37153	37199	94	+	.	.
scaffold37622	subtractBed	intrn	39588	39654	.	-	.	Parent=CGI_10002429;
	scaffold37622	TRF	Tandem_Repeat	39588	39654	89	+	.	.
scaffold37662	subtractBed	intrn	43404	43433	.	-	.	Parent=CGI_10002444;
	scaffold37662	TRF	Tandem_Repeat	43404	43433	60	+	.	.
scaffold37664	subtractBed	intrn	30090	30722	.	+	.	Parent=CGI_10002440;
	scaffold37664	WUBlastX	LINE_CR1-L2	30090	30722	236	+	.	.
scaffold37664	subtractBed	intrn	30096	30839	.	+	.	Parent=CGI_10002440;
	scaffold37664	WUBlastX	LINE_L2	30096	30839	182	+	.	.
scaffold37664	subtractBed	intrn	31736	31831	.	+	.	Parent=CGI_10002440;
	scaffold37664	WUBlastX	LINE_L2	31736	31831	26	+	.	.
scaffold37664	subtractBed	intrn	29970	30701	.	+	.	Parent=CGI_10002440;
	scaffold37664	WUBlastX	LINE_L2	29970	30701	40	+	.	.
scaffold37672	subtractBed	intrn	34456	34503	.	+	.	Parent=CGI_10002462;
	scaffold37672	TRF	Tandem_Repeat	34456	34503	96	+	.	.
scaffold37678	subtractBed	intrn	3518	3621	.	-	.	Parent=CGI_10002431;
	scaffold37678	TRF	Tandem_Repeat	3518	3621	154	+	.	.
scaffold37678	subtractBed	intrn	3910	3939	.	-	.	Parent=CGI_10002431;
	scaffold37678	TRF	Tandem_Repeat	3910	3939	51	+	.	.
scaffold37678	subtractBed	intrn	6655	6886	.	-	.	Parent=CGI_10002431;
	scaffold37678	TRF	Tandem_Repeat	6655	6886	319	+	.	.
scaffold37678	subtractBed	intrn	8393	13984	.	-	.	Parent=CGI_10002431;
	scaffold37678	WUBlastX	RC_Helitron	8393	13984	1930	-	.	.
scaffold37678	subtractBed	intrn	11840	14506	.	-	.	Parent=CGI_10002431;
	scaffold37678	WUBlastX	DNA_Helitron	11840	14506	755	-	.	.
scaffold37678	subtractBed	intrn	18939	18978	.	-	.	Parent=CGI_10002431;
	scaffold37678	TRF	Tandem_Repeat	18939	18978	52	+	.	.
scaffold37678	subtractBed	intrn	26844	26879	.	+	.	Parent=CGI_10002432;
	scaffold37678	TRF	Tandem_Repeat	26844	26879	72	+	.	.
scaffold37678	subtractBed	intrn	35140	35200	.	-	.	Parent=CGI_10002434;
	scaffold37678	TRF	Tandem_Repeat	35140	35200	61	+	.	.
scaffold37678	subtractBed	intrn	36111	36154	.	-	.	Parent=CGI_10002434;
	scaffold37678	TRF	Tandem_Repeat	36111	36154	52	+	.	.
scaffold37680	subtractBed	intrn	43236	43447	.	-	.	Parent=CGI_10002457;
	scaffold37680	TRF	Tandem_Repeat	43236	43447	203	+	.	.
scaffold377	subtractBed	intrn	118739	118791	.	+	.	Parent=CGI_10019401;
	scaffold377	TRF	Tandem_Repeat	118739	118791	106	+	.	.
scaffold377	subtractBed	intrn	128123	128380	.	-	.	Parent=CGI_10019402;
	scaffold377	TRF	Tandem_Repeat	128123	128380	336	+	.	.
scaffold377	subtractBed	intrn	141854	142091	.	-	.	Parent=CGI_10019404;
	scaffold377	TRF	Tandem_Repeat	141854	142091	431	+	.	.
scaffold377	subtractBed	intrn	143580	143616	.	-	.	Parent=CGI_10019404;
	scaffold377	TRF	Tandem_Repeat	143580	143616	65	+	.	.
scaffold377	subtractBed	intrn	143727	143897	.	-	.	Parent=CGI_10019404;
	scaffold377	WUBlastX	LINE_RTE-X	143727	143897	30	+	.	.
scaffold377	subtractBed	intrn	144775	144938	.	-	.	Parent=CGI_10019404;
	scaffold377	WUBlastX	LINE_L1-Tx1	144775	145173	24	+	.	.
scaffold377	subtractBed	intrn	143820	143957	.	-	.	Parent=CGI_10019404;
	scaffold377	WUBlastX	LINE_RTE-X	143820	143957	35	+	.	.
scaffold377	subtractBed	intrn	247890	248058	.	+	.	Parent=CGI_10019408;
	scaffold377	TRF	Tandem_Repeat	247890	248058	243	+	.	.
scaffold377	subtractBed	intrn	248189	248410	.	+	.	Parent=CGI_10019408;
	scaffold377	TRF	Tandem_Repeat	248189	248410	322	+	.	.
scaffold377	subtractBed	intrn	319127	319294	.	-	.	Parent=CGI_10019410;
	scaffold377	TRF	Tandem_Repeat	319127	319294	84	+	.	.
scaffold377	subtractBed	intrn	320085	320123	.	-	.	Parent=CGI_10019410;
	scaffold377	TRF	Tandem_Repeat	320085	320123	78	+	.	.
scaffold377	subtractBed	intrn	362782	362926	.	-	.	Parent=CGI_10019412;
	scaffold377	TRF	Tandem_Repeat	362782	362926	206	+	.	.
scaffold377	subtractBed	intrn	370105	370326	.	-	.	Parent=CGI_10019412;
	scaffold377	TRF	Tandem_Repeat	370105	370329	299	+	.	.
scaffold377	subtractBed	intrn	526004	526065	.	-	.	Parent=CGI_10019420;
	scaffold377	TRF	Tandem_Repeat	526004	526065	124	+	.	.
scaffold37712	subtractBed	intrn	15377	15430	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	DNA_Harbinger	15242	15430	92	-	.	.
scaffold37712	subtractBed	intrn	15906	16007	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	DNA_Harbinger	15906	16007	48	-	.	.
scaffold37712	subtractBed	intrn	34749	34787	.	-	.	Parent=CGI_10002463;
	scaffold37712	TRF	Tandem_Repeat	34749	34787	78	+	.	.
scaffold37712	subtractBed	intrn	37291	37391	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	37291	37437	63	-	.	.
scaffold37712	subtractBed	intrn	35907	36056	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	35907	36056	22	+	.	.
scaffold37712	subtractBed	intrn	36429	36818	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	36429	36818	226	+	.	.
scaffold37712	subtractBed	intrn	36324	36860	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	36324	36860	225	+	.	.
scaffold37712	subtractBed	intrn	35974	36333	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	35974	36333	71	+	.	.
scaffold37712	subtractBed	intrn	36136	36333	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	36136	36333	82	+	.	.
scaffold37712	subtractBed	intrn	37291	37389	.	-	.	Parent=CGI_10002463;
	scaffold37712	WUBlastX	LTR_Gypsy	37291	37389	67	-	.	.
scaffold37732	subtractBed	intrn	45610	45671	.	+	.	Parent=CGI_10002485;
	scaffold37732	TRF	Tandem_Repeat	45610	45671	51	+	.	.
scaffold37732	subtractBed	intrn	46263	46295	.	+	.	Parent=CGI_10002485;
	scaffold37732	WUBlastX	DNA_MuDR	46263	46586	95	-	.	.
scaffold37740	subtractBed	intrn	8222	8803	.	-	.	Parent=CGI_10002468;
	scaffold37740	WUBlastX	DNA_NOF	8222	8803	112	-	.	.
scaffold37740	subtractBed	intrn	8426	8923	.	-	.	Parent=CGI_10002468;
	scaffold37740	WUBlastX	DNA_NOF	8426	8923	136	-	.	.
scaffold37740	subtractBed	intrn	9773	9880	.	-	.	Parent=CGI_10002468;
	scaffold37740	WUBlastX	DNA_MuDR	9773	9880	89	-	.	.
scaffold37740	subtractBed	intrn	11054	11374	.	-	.	Parent=CGI_10002468;
	scaffold37740	WUBlastX	DNA_NOF	11054	11374	251	-	.	.
scaffold37740	subtractBed	intrn	10940	11311	.	-	.	Parent=CGI_10002468;
	scaffold37740	WUBlastX	DNA_MuDR	10940	11311	25	-	.	.
scaffold37740	subtractBed	intrn	15147	15227	.	-	.	Parent=CGI_10002469;
	scaffold37740	TRF	Tandem_Repeat	15147	15227	153	+	.	.
scaffold37740	subtractBed	intrn	17177	17236	.	-	.	Parent=CGI_10002469;
	scaffold37740	TRF	Tandem_Repeat	17177	17236	111	+	.	.
scaffold37740	subtractBed	intrn	27089	27376	.	-	.	Parent=CGI_10002469;
	scaffold37740	WUBlastX	LINE_RTE-X	27089	27376	36	+	.	.
scaffold37760	subtractBed	intrn	15184	15237	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_ERVK	15184	15237	23	+	.	.
scaffold37760	subtractBed	intrn	11564	13692	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_Gypsy	11326	13692	767	+	.	.
scaffold37760	subtractBed	intrn	11848	15222	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_Gypsy	11848	15222	2065	+	.	.
scaffold37760	subtractBed	intrn	17488	17546	.	+	.	Parent=CGI_10002466;
	scaffold37760	TRF	Tandem_Repeat	17488	17546	118	+	.	.
scaffold37760	subtractBed	intrn	21155	21223	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_DIRS	21155	21223	35	-	.	.
scaffold37760	subtractBed	intrn	20866	21078	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_DIRS	20866	21078	92	-	.	.
scaffold37760	subtractBed	intrn	20495	20941	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_DIRS	20495	20941	188	-	.	.
scaffold37760	subtractBed	intrn	20489	20872	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_DIRS	20489	20872	244	-	.	.
scaffold37760	subtractBed	intrn	21433	21609	.	+	.	Parent=CGI_10002466;
	scaffold37760	WUBlastX	LTR_DIRS	21433	21609	43	-	.	.
scaffold37772	subtractBed	intrn	11019	11154	.	+	.	Parent=CGI_10002492;
	scaffold37772	TRF	Tandem_Repeat	11019	11154	85	+	.	.
scaffold37772	subtractBed	intrn	10945	11154	.	+	.	Parent=CGI_10002492;
	scaffold37772	TRF	Tandem_Repeat	10945	11154	144	+	.	.
scaffold37772	subtractBed	intrn	11019	11171	.	+	.	Parent=CGI_10002492;
	scaffold37772	TRF	Tandem_Repeat	11019	11171	109	+	.	.
scaffold37772	subtractBed	intrn	14563	14604	.	+	.	Parent=CGI_10002492;
	scaffold37772	TRF	Tandem_Repeat	14563	14604	50	+	.	.
scaffold37772	subtractBed	intrn	19313	19495	.	+	.	Parent=CGI_10002492;
	scaffold37772	TRF	Tandem_Repeat	19313	19495	249	+	.	.
scaffold37772	subtractBed	intrn	22929	23278	.	-	.	Parent=CGI_10002493;
	scaffold37772	WUBlastX	DNA_Maverick	22880	23278	121	-	.	.
scaffold37772	subtractBed	intrn	22943	23248	.	-	.	Parent=CGI_10002493;
	scaffold37772	WUBlastX	DNA_Maverick	22943	23248	175	-	.	.
scaffold37790	subtractBed	intrn	7841	7921	.	-	.	Parent=CGI_10002498;
	scaffold37790	TRF	Tandem_Repeat	7841	7921	56	+	.	.
scaffold37790	subtractBed	intrn	9886	10131	.	-	.	Parent=CGI_10002498;
	scaffold37790	WUBlastX	LTR_Ngaro	9886	10131	96	-	.	.
scaffold37790	subtractBed	intrn	10173	10550	.	-	.	Parent=CGI_10002498;
	scaffold37790	WUBlastX	LTR_Ngaro	10173	10550	139	-	.	.
scaffold37790	subtractBed	intrn	9808	10071	.	-	.	Parent=CGI_10002498;
	scaffold37790	WUBlastX	LTR_Ngaro	9808	10071	69	-	.	.
scaffold37794	subtractBed	intrn	33466	33512	.	+	.	Parent=CGI_10002501;
	scaffold37794	TRF	Tandem_Repeat	33466	33512	94	+	.	.
scaffold37794	subtractBed	intrn	34743	35135	.	+	.	Parent=CGI_10002501;
	scaffold37794	WUBlastX	DNA_hAT-Tip100	34743	35135	83	-	.	.
scaffold37794	subtractBed	intrn	34767	34964	.	+	.	Parent=CGI_10002501;
	scaffold37794	WUBlastX	DNA_hAT-Tip100	34767	34964	115	-	.	.
scaffold37794	subtractBed	intrn	34665	34982	.	+	.	Parent=CGI_10002501;
	scaffold37794	WUBlastX	DNA_hAT-Tip100	34665	34982	45	-	.	.
scaffold378	subtractBed	intrn	2186	2352	.	-	.	Parent=CGI_10017629;
	scaffold378	TRF	Tandem_Repeat	2186	2352	271	+	.	.
scaffold378	subtractBed	intrn	3403	3574	.	-	.	Parent=CGI_10017629;
	scaffold378	TRF	Tandem_Repeat	3403	3574	241	+	.	.
scaffold378	subtractBed	intrn	14431	14455	.	-	.	Parent=CGI_10017629;
	scaffold378	TRF	Tandem_Repeat	14431	14455	50	+	.	.
scaffold378	subtractBed	intrn	40013	40129	.	+	.	Parent=CGI_10017631;
	scaffold378	TRF	Tandem_Repeat	40013	40129	85	+	.	.
scaffold378	subtractBed	intrn	78980	79157	.	+	.	Parent=CGI_10017634;
	scaffold378	TRF	Tandem_Repeat	78980	79157	193	+	.	.
scaffold378	subtractBed	intrn	78980	79177	.	+	.	Parent=CGI_10017634;
	scaffold378	TRF	Tandem_Repeat	78980	79177	111	+	.	.
scaffold378	subtractBed	intrn	185084	185283	.	-	.	Parent=CGI_10017638;
	scaffold378	TRF	Tandem_Repeat	185084	185283	228	+	.	.
scaffold378	subtractBed	intrn	185086	186036	.	-	.	Parent=CGI_10017638;
	scaffold378	TRF	Tandem_Repeat	185086	186036	555	+	.	.
scaffold378	subtractBed	intrn	185479	186013	.	-	.	Parent=CGI_10017638;
	scaffold378	TRF	Tandem_Repeat	185479	186013	638	+	.	.
scaffold378	subtractBed	intrn	185479	186036	.	-	.	Parent=CGI_10017638;
	scaffold378	TRF	Tandem_Repeat	185479	186036	637	+	.	.
scaffold378	subtractBed	intrn	200549	200609	.	-	.	Parent=CGI_10017640;
	scaffold378	TRF	Tandem_Repeat	200549	200609	95	+	.	.
scaffold378	subtractBed	intrn	225404	225710	.	+	.	Parent=CGI_10017641;
	scaffold378	TRF	Tandem_Repeat	225403	225710	508	+	.	.
scaffold378	subtractBed	intrn	232954	234212	.	+	.	Parent=CGI_10017641;
	scaffold378	TRF	Tandem_Repeat	232954	234212	1996	+	.	.
scaffold378	subtractBed	intrn	237968	238120	.	+	.	Parent=CGI_10017641;
	scaffold378	TRF	Tandem_Repeat	237968	238120	236	+	.	.
scaffold378	subtractBed	intrn	241948	241983	.	+	.	Parent=CGI_10017641;
	scaffold378	TRF	Tandem_Repeat	241948	241983	54	+	.	.
scaffold378	subtractBed	intrn	240627	241904	.	+	.	Parent=CGI_10017641;
	scaffold378	WUBlastX	LINE_L1-Tx1	240627	241904	227	-	.	.
scaffold378	subtractBed	intrn	243570	244687	.	+	.	Parent=CGI_10017641;
	scaffold378	WUBlastX	LINE_Jockey	243570	244796	54	-	.	.
scaffold378	subtractBed	intrn	243441	244601	.	+	.	Parent=CGI_10017641;
	scaffold378	WUBlastX	LINE_L1-Tx1	243441	244601	837	-	.	.
scaffold378	subtractBed	intrn	225404	225710	.	-	.	Parent=CGI_10017642;
	scaffold378	TRF	Tandem_Repeat	225403	225710	508	+	.	.
scaffold378	subtractBed	intrn	255095	255283	.	-	.	Parent=CGI_10017643;
	scaffold378	WUBlastX	LINE_L1	255095	255283	82	-	.	.
scaffold378	subtractBed	intrn	255434	255988	.	-	.	Parent=CGI_10017643;
	scaffold378	WUBlastX	DNA_Maverick	255434	255988	348	-	.	.
scaffold378	subtractBed	intrn	255095	255250	.	-	.	Parent=CGI_10017643;
	scaffold378	WUBlastX	LINE_L1-Tx1	255095	255250	108	-	.	.
scaffold378	subtractBed	intrn	255175	255420	.	-	.	Parent=CGI_10017643;
	scaffold378	WUBlastX	LINE_L1-Tx1	255175	255420	42	-	.	.
scaffold378	subtractBed	intrn	368015	368049	.	-	.	Parent=CGI_10017655;
	scaffold378	TRF	Tandem_Repeat	368015	368049	52	+	.	.
scaffold378	subtractBed	intrn	368019	368059	.	-	.	Parent=CGI_10017655;
	scaffold378	TRF	Tandem_Repeat	368019	368059	55	+	.	.
scaffold378	subtractBed	intrn	375466	375546	.	-	.	Parent=CGI_10017655;
	scaffold378	TRF	Tandem_Repeat	375466	375546	126	+	.	.
scaffold378	subtractBed	intrn	377181	377360	.	-	.	Parent=CGI_10017655;
	scaffold378	WUBlastX	LINE_RTE-X	377181	377360	111	-	.	.
scaffold378	subtractBed	intrn	390068	390099	.	-	.	Parent=CGI_10017658;
	scaffold378	TRF	Tandem_Repeat	390068	390099	64	+	.	.
scaffold378	subtractBed	intrn	399048	399084	.	+	.	Parent=CGI_10017659;
	scaffold378	TRF	Tandem_Repeat	399048	399084	74	+	.	.
scaffold378	subtractBed	intrn	411557	412270	.	+	.	Parent=CGI_10017660;
	scaffold378	TRF	Tandem_Repeat	411557	412270	830	+	.	.
scaffold378	subtractBed	intrn	415817	415986	.	+	.	Parent=CGI_10017660;
	scaffold378	TRF	Tandem_Repeat	415817	415986	126	+	.	.
scaffold378	subtractBed	intrn	428406	428533	.	+	.	Parent=CGI_10017660;
	scaffold378	TRF	Tandem_Repeat	428406	428533	229	+	.	.
scaffold378	subtractBed	intrn	432290	432340	.	-	.	Parent=CGI_10017662;
	scaffold378	TRF	Tandem_Repeat	432290	432340	102	+	.	.
scaffold378	subtractBed	intrn	464545	464569	.	-	.	Parent=CGI_10017666;
	scaffold378	TRF	Tandem_Repeat	464545	464569	50	+	.	.
scaffold378	subtractBed	intrn	465364	465408	.	-	.	Parent=CGI_10017666;
	scaffold378	TRF	Tandem_Repeat	465364	465408	90	+	.	.
scaffold378	subtractBed	intrn	486525	486562	.	-	.	Parent=CGI_10017667;
	scaffold378	TRF	Tandem_Repeat	486525	486562	76	+	.	.
scaffold37844	subtractBed	intrn	5656	5937	.	-	.	Parent=CGI_10002508;
	scaffold37844	WUBlastX	LINE_Penelope	5656	5937	38	-	.	.
scaffold37844	subtractBed	intrn	5379	5669	.	-	.	Parent=CGI_10002508;
	scaffold37844	WUBlastX	LINE_Penelope	5379	5669	68	-	.	.
scaffold37850	subtractBed	intrn	38743	38793	.	-	.	Parent=CGI_10002505;
	scaffold37850	TRF	Tandem_Repeat	38743	38793	57	+	.	.
scaffold37850	subtractBed	intrn	38747	38797	.	-	.	Parent=CGI_10002505;
	scaffold37850	TRF	Tandem_Repeat	38747	38797	66	+	.	.
scaffold37850	subtractBed	intrn	38743	38799	.	-	.	Parent=CGI_10002505;
	scaffold37850	TRF	Tandem_Repeat	38743	38799	60	+	.	.
scaffold37856	subtractBed	intrn	11522	11592	.	-	.	Parent=CGI_10002518;
	scaffold37856	TRF	Tandem_Repeat	11522	11592	79	+	.	.
scaffold37856	subtractBed	intrn	20265	20317	.	-	.	Parent=CGI_10002518;
	scaffold37856	TRF	Tandem_Repeat	20265	20317	106	+	.	.
scaffold37858	subtractBed	intrn	14221	14257	.	+	.	Parent=CGI_10002515;
	scaffold37858	TRF	Tandem_Repeat	14221	14257	56	+	.	.
scaffold37858	subtractBed	intrn	25953	25981	.	+	.	Parent=CGI_10002515;
	scaffold37858	TRF	Tandem_Repeat	25953	25981	58	+	.	.
scaffold37858	subtractBed	intrn	14221	14257	.	-	.	Parent=CGI_10002516;
	scaffold37858	TRF	Tandem_Repeat	14221	14257	56	+	.	.
scaffold37880	subtractBed	intrn	6367	6442	.	-	.	Parent=CGI_10002532;
	scaffold37880	TRF	Tandem_Repeat	6367	6442	116	+	.	.
scaffold37880	subtractBed	intrn	9485	9518	.	-	.	Parent=CGI_10002532;
	scaffold37880	TRF	Tandem_Repeat	9485	9518	50	+	.	.
scaffold37880	subtractBed	intrn	10387	10498	.	-	.	Parent=CGI_10002532;
	scaffold37880	TRF	Tandem_Repeat	10387	10498	104	+	.	.
scaffold37880	subtractBed	intrn	10374	10498	.	-	.	Parent=CGI_10002532;
	scaffold37880	TRF	Tandem_Repeat	10374	10498	66	+	.	.
scaffold37880	subtractBed	intrn	15409	15993	.	-	.	Parent=CGI_10002532;
	scaffold37880	WUBlastX	DNA_Maverick	15409	15993	352	+	.	.
scaffold37880	subtractBed	intrn	13487	13858	.	-	.	Parent=CGI_10002532;
	scaffold37880	WUBlastX	DNA_TcMar-Ant1	13487	13858	102	+	.	.
scaffold37880	subtractBed	intrn	13487	13801	.	-	.	Parent=CGI_10002532;
	scaffold37880	WUBlastX	DNA_TcMar-Ant1	13487	13801	103	+	.	.
scaffold37880	subtractBed	intrn	13325	13768	.	-	.	Parent=CGI_10002532;
	scaffold37880	WUBlastX	DNA_TcMar-ISRm1	13325	13768	94	+	.	.
scaffold37880	subtractBed	intrn	20722	20724	.	+	.	Parent=CGI_10002533;
	scaffold37880	WUBlastX	DNA_Zator	19063	20724	783	+	.	.
scaffold37880	subtractBed	intrn	20774	20860	.	+	.	Parent=CGI_10002533;
	scaffold37880	WUBlastX	DNA_Zator	20774	21046	71	+	.	.
scaffold37880	subtractBed	intrn	26692	26693	.	+	.	Parent=CGI_10002534;
	scaffold37880	WUBlastX	DNA_Harbinger	26692	26907	51	+	.	.
scaffold37880	subtractBed	intrn	26455	26559	.	+	.	Parent=CGI_10002534;
	scaffold37880	WUBlastX	DNA_Harbinger	26455	26559	35	+	.	.
scaffold37880	subtractBed	intrn	26292	26501	.	+	.	Parent=CGI_10002534;
	scaffold37880	WUBlastX	DNA_Harbinger	26292	26501	130	+	.	.
scaffold37880	subtractBed	intrn	37121	37155	.	-	.	Parent=CGI_10002538;
	scaffold37880	WUBlastX	LTR_ERVK	36940	37155	48	+	.	.
scaffold37880	subtractBed	intrn	40434	40545	.	-	.	Parent=CGI_10002538;
	scaffold37880	TRF	Tandem_Repeat	40434	40545	89	+	.	.
scaffold37880	subtractBed	intrn	43794	43836	.	-	.	Parent=CGI_10002538;
	scaffold37880	TRF	Tandem_Repeat	43794	43836	86	+	.	.
scaffold37900	subtractBed	intrn	20436	20792	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	LINE_CR1	20436	20792	141	+	.	.
scaffold37900	subtractBed	intrn	20370	20792	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	LINE_CR1	20370	20792	80	+	.	.
scaffold37900	subtractBed	intrn	24702	24792	.	-	.	Parent=CGI_10002507;
	scaffold37900	TRF	Tandem_Repeat	24702	24792	78	+	.	.
scaffold37900	subtractBed	intrn	28989	29021	.	-	.	Parent=CGI_10002507;
	scaffold37900	TRF	Tandem_Repeat	28989	29021	66	+	.	.
scaffold37900	subtractBed	intrn	32352	32386	.	-	.	Parent=CGI_10002507;
	scaffold37900	TRF	Tandem_Repeat	32352	32386	70	+	.	.
scaffold37900	subtractBed	intrn	30711	31661	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	30711	31661	131	-	.	.
scaffold37900	subtractBed	intrn	30735	31409	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	30735	31409	191	-	.	.
scaffold37900	subtractBed	intrn	31933	32226	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	31933	32226	61	-	.	.
scaffold37900	subtractBed	intrn	29598	30356	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	29598	30356	490	+	.	.
scaffold37900	subtractBed	intrn	29448	30353	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	29448	30353	436	+	.	.
scaffold37900	subtractBed	intrn	27933	28421	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	27933	28421	52	+	.	.
scaffold37900	subtractBed	intrn	29087	29287	.	-	.	Parent=CGI_10002507;
	scaffold37900	WUBlastX	DNA_IS4EU	29087	29287	20	+	.	.
scaffold37938	subtractBed	intrn	27653	27720	.	+	.	Parent=CGI_10002550;
	scaffold37938	TRF	Tandem_Repeat	27653	27720	75	+	.	.
scaffold37938	subtractBed	intrn	27672	27729	.	+	.	Parent=CGI_10002550;
	scaffold37938	TRF	Tandem_Repeat	27672	27729	71	+	.	.
scaffold37938	subtractBed	intrn	28286	28397	.	+	.	Parent=CGI_10002550;
	scaffold37938	TRF	Tandem_Repeat	28286	28397	199	+	.	.
scaffold37946	subtractBed	intrn	14131	14607	.	+	.	Parent=CGI_10002553;
	scaffold37946	WUBlastX	LTR_Gypsy	14131	14607	74	-	.	.
scaffold37946	subtractBed	intrn	14536	14637	.	+	.	Parent=CGI_10002553;
	scaffold37946	WUBlastX	DNA_IS4EU	14536	14637	59	+	.	.
scaffold37946	subtractBed	intrn	14050	14505	.	+	.	Parent=CGI_10002553;
	scaffold37946	WUBlastX	LTR_Gypsy	14050	14505	106	-	.	.
scaffold37946	subtractBed	intrn	14533	14700	.	+	.	Parent=CGI_10002553;
	scaffold37946	WUBlastX	DNA_IS4EU	14533	14700	36	+	.	.
scaffold37946	subtractBed	intrn	14696	14851	.	+	.	Parent=CGI_10002553;
	scaffold37946	WUBlastX	DNA_IS4EU	14696	14851	31	+	.	.
scaffold37946	subtractBed	intrn	17356	17397	.	+	.	Parent=CGI_10002553;
	scaffold37946	TRF	Tandem_Repeat	17356	17397	52	+	.	.
scaffold37946	subtractBed	intrn	17582	17641	.	+	.	Parent=CGI_10002553;
	scaffold37946	TRF	Tandem_Repeat	17582	17641	120	+	.	.
scaffold37968	subtractBed	intrn	43051	43121	.	+	.	Parent=CGI_10002555;
	scaffold37968	TRF	Tandem_Repeat	43051	43121	70	+	.	.
scaffold37968	subtractBed	intrn	43042	43117	.	+	.	Parent=CGI_10002555;
	scaffold37968	TRF	Tandem_Repeat	43042	43117	64	+	.	.
scaffold37992	subtractBed	intrn	7509	7549	.	+	.	Parent=CGI_10002585;
	scaffold37992	TRF	Tandem_Repeat	7509	7549	64	+	.	.
scaffold37992	subtractBed	intrn	9367	9410	.	+	.	Parent=CGI_10002585;
	scaffold37992	TRF	Tandem_Repeat	9367	9410	88	+	.	.
scaffold38010	subtractBed	intrn	15680	15753	.	-	.	Parent=CGI_10002573;
	scaffold38010	TRF	Tandem_Repeat	15680	15753	87	+	.	.
scaffold38010	subtractBed	intrn	15713	15806	.	-	.	Parent=CGI_10002573;
	scaffold38010	TRF	Tandem_Repeat	15713	15806	116	+	.	.
scaffold38010	subtractBed	intrn	26201	26259	.	-	.	Parent=CGI_10002574;
	scaffold38010	TRF	Tandem_Repeat	26201	26259	52	+	.	.
scaffold38026	subtractBed	intrn	29391	29439	.	-	.	Parent=CGI_10002428;
	scaffold38026	TRF	Tandem_Repeat	29391	29439	98	+	.	.
scaffold38026	subtractBed	intrn	25289	25465	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	25289	25465	103	+	.	.
scaffold38026	subtractBed	intrn	25461	26642	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	25461	26642	151	+	.	.
scaffold38026	subtractBed	intrn	25259	25435	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	25259	25435	79	+	.	.
scaffold38026	subtractBed	intrn	27080	27547	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	27080	27547	90	+	.	.
scaffold38026	subtractBed	intrn	24777	25109	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy-Cigr	24777	25109	46	+	.	.
scaffold38026	subtractBed	intrn	26921	27808	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	26921	27808	26	+	.	.
scaffold38026	subtractBed	intrn	24717	24962	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	24717	24962	72	+	.	.
scaffold38026	subtractBed	intrn	26409	26708	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	26409	26708	181	+	.	.
scaffold38026	subtractBed	intrn	27278	27835	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	27278	27835	161	+	.	.
scaffold38026	subtractBed	intrn	25639	26418	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	25639	26418	320	+	.	.
scaffold38026	subtractBed	intrn	26409	26840	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	26409	26840	83	+	.	.
scaffold38026	subtractBed	intrn	25220	25423	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	25220	25423	76	+	.	.
scaffold38026	subtractBed	intrn	24684	24992	.	-	.	Parent=CGI_10002428;
	scaffold38026	WUBlastX	LTR_Gypsy	24684	24992	57	+	.	.
scaffold38048	subtractBed	intrn	37783	38598	.	+	.	Parent=CGI_10002589;
	scaffold38048	TRF	Tandem_Repeat	37783	38598	771	+	.	.
scaffold38048	subtractBed	intrn	37785	38598	.	+	.	Parent=CGI_10002589;
	scaffold38048	TRF	Tandem_Repeat	37785	38598	814	+	.	.
scaffold38048	subtractBed	intrn	38738	38778	.	+	.	Parent=CGI_10002589;
	scaffold38048	TRF	Tandem_Repeat	38738	38778	73	+	.	.
scaffold38048	subtractBed	intrn	33366	34202	.	+	.	Parent=CGI_10002589;
	scaffold38048	WUBlastX	DNA_TcMar-Tc1	33366	34202	93	+	.	.
scaffold38048	subtractBed	intrn	33173	33472	.	+	.	Parent=CGI_10002589;
	scaffold38048	WUBlastX	DNA_TcMar-Tc1	33173	33472	55	+	.	.
scaffold38048	subtractBed	intrn	33495	34211	.	+	.	Parent=CGI_10002589;
	scaffold38048	WUBlastX	DNA_TcMar-Tc1	33495	34211	257	+	.	.
scaffold38058	subtractBed	intrn	4495	4710	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4495	4710	23	-	.	.
scaffold38058	subtractBed	intrn	4986	5513	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4986	5513	59	-	.	.
scaffold38058	subtractBed	intrn	5497	5940	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	5497	5940	31	-	.	.
scaffold38058	subtractBed	intrn	5226	5531	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy-Cigr	5226	5531	118	-	.	.
scaffold38058	subtractBed	intrn	4573	4995	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4573	4995	61	-	.	.
scaffold38058	subtractBed	intrn	5416	5667	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	5416	5667	86	-	.	.
scaffold38058	subtractBed	intrn	4882	4995	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4882	4995	70	-	.	.
scaffold38058	subtractBed	intrn	4666	5133	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4666	5133	67	-	.	.
scaffold38058	subtractBed	intrn	4718	4870	.	-	.	Parent=CGI_10002595;
	scaffold38058	WUBlastX	LTR_Gypsy	4718	4870	79	-	.	.
scaffold38058	subtractBed	intrn	31478	31539	.	+	.	Parent=CGI_10002597;
	scaffold38058	TRF	Tandem_Repeat	31478	31539	52	+	.	.
scaffold38058	subtractBed	intrn	34211	34275	.	+	.	Parent=CGI_10002597;
	scaffold38058	TRF	Tandem_Repeat	34211	34275	130	+	.	.
scaffold38058	subtractBed	intrn	37205	37311	.	+	.	Parent=CGI_10002597;
	scaffold38058	TRF	Tandem_Repeat	37205	37311	162	+	.	.
scaffold38058	subtractBed	intrn	40069	40112	.	+	.	Parent=CGI_10002597;
	scaffold38058	TRF	Tandem_Repeat	40069	40112	61	+	.	.
scaffold38058	subtractBed	intrn	41385	41453	.	+	.	Parent=CGI_10002597;
	scaffold38058	TRF	Tandem_Repeat	41385	41453	131	+	.	.
scaffold38058	subtractBed	intrn	31478	31539	.	-	.	Parent=CGI_10002598;
	scaffold38058	TRF	Tandem_Repeat	31478	31539	52	+	.	.
scaffold38058	subtractBed	intrn	34211	34275	.	-	.	Parent=CGI_10002598;
	scaffold38058	TRF	Tandem_Repeat	34211	34275	130	+	.	.
scaffold38058	subtractBed	intrn	37205	37311	.	-	.	Parent=CGI_10002598;
	scaffold38058	TRF	Tandem_Repeat	37205	37311	162	+	.	.
scaffold38058	subtractBed	intrn	40069	40112	.	-	.	Parent=CGI_10002598;
	scaffold38058	TRF	Tandem_Repeat	40069	40112	61	+	.	.
scaffold38058	subtractBed	intrn	41385	41453	.	-	.	Parent=CGI_10002598;
	scaffold38058	TRF	Tandem_Repeat	41385	41453	131	+	.	.
scaffold38066	subtractBed	intrn	26079	26480	.	+	.	Parent=CGI_10002612;
	scaffold38066	WUBlastX	LINE_L1-Tx1	26079	26480	127	-	.	.
scaffold381	subtractBed	intrn	51243	51274	.	-	.	Parent=CGI_10017553;
	scaffold381	TRF	Tandem_Repeat	51243	51274	55	+	.	.
scaffold381	subtractBed	intrn	137193	137353	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	137193	137353	128	+	.	.
scaffold381	subtractBed	intrn	141068	141105	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	141068	141105	76	+	.	.
scaffold381	subtractBed	intrn	141250	141296	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	141250	141296	94	+	.	.
scaffold381	subtractBed	intrn	153640	153700	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	153640	153700	52	+	.	.
scaffold381	subtractBed	intrn	158641	158668	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	158641	158668	56	+	.	.
scaffold381	subtractBed	intrn	159723	159768	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	159723	159768	92	+	.	.
scaffold381	subtractBed	intrn	165267	165397	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	165267	165397	129	+	.	.
scaffold381	subtractBed	intrn	167506	167916	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	167506	167916	565	+	.	.
scaffold381	subtractBed	intrn	165817	167211	.	-	.	Parent=CGI_10017555;
	scaffold381	WUBlastX	LINE_L2	165817	167211	831	+	.	.
scaffold381	subtractBed	intrn	165715	166212	.	-	.	Parent=CGI_10017555;
	scaffold381	WUBlastX	LINE_L2	165715	166212	67	+	.	.
scaffold381	subtractBed	intrn	165580	166440	.	-	.	Parent=CGI_10017555;
	scaffold381	WUBlastX	LINE_Proto2	165580	166440	44	+	.	.
scaffold381	subtractBed	intrn	178263	178325	.	-	.	Parent=CGI_10017555;
	scaffold381	TRF	Tandem_Repeat	178263	178325	126	+	.	.
scaffold381	subtractBed	intrn	187540	187611	.	+	.	Parent=CGI_10017558;
	scaffold381	TRF	Tandem_Repeat	187540	187611	108	+	.	.
scaffold381	subtractBed	intrn	190218	190249	.	+	.	Parent=CGI_10017558;
	scaffold381	TRF	Tandem_Repeat	190218	190249	50	+	.	.
scaffold381	subtractBed	intrn	193035	193067	.	+	.	Parent=CGI_10017558;
	scaffold381	TRF	Tandem_Repeat	193035	193067	66	+	.	.
scaffold381	subtractBed	intrn	206033	206081	.	-	.	Parent=CGI_10017559;
	scaffold381	TRF	Tandem_Repeat	206033	206081	98	+	.	.
scaffold381	subtractBed	intrn	208300	208359	.	-	.	Parent=CGI_10017559;
	scaffold381	TRF	Tandem_Repeat	208300	208359	120	+	.	.
scaffold381	subtractBed	intrn	209034	209076	.	-	.	Parent=CGI_10017559;
	scaffold381	TRF	Tandem_Repeat	209034	209076	86	+	.	.
scaffold381	subtractBed	intrn	211613	211658	.	-	.	Parent=CGI_10017559;
	scaffold381	TRF	Tandem_Repeat	211613	211658	92	+	.	.
scaffold381	subtractBed	intrn	361878	361902	.	+	.	Parent=CGI_10017563;
	scaffold381	TRF	Tandem_Repeat	361878	361902	50	+	.	.
scaffold381	subtractBed	intrn	365361	366086	.	+	.	Parent=CGI_10017563;
	scaffold381	TRF	Tandem_Repeat	365361	366086	952	+	.	.
scaffold381	subtractBed	intrn	370405	370444	.	+	.	Parent=CGI_10017563;
	scaffold381	TRF	Tandem_Repeat	370405	370444	80	+	.	.
scaffold381	subtractBed	intrn	375878	375919	.	+	.	Parent=CGI_10017563;
	scaffold381	TRF	Tandem_Repeat	375878	375919	66	+	.	.
scaffold381	subtractBed	intrn	393718	393754	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	393718	393754	74	+	.	.
scaffold381	subtractBed	intrn	394639	394685	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	394639	394685	85	+	.	.
scaffold381	subtractBed	intrn	396656	396689	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	396656	396689	68	+	.	.
scaffold381	subtractBed	intrn	401003	401104	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	401003	401104	105	+	.	.
scaffold381	subtractBed	intrn	401003	401104	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	401003	401104	123	+	.	.
scaffold381	subtractBed	intrn	401006	401102	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	401006	401102	88	+	.	.
scaffold381	subtractBed	intrn	401898	401923	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	401898	401923	52	+	.	.
scaffold381	subtractBed	intrn	401958	402029	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	401958	402029	144	+	.	.
scaffold381	subtractBed	intrn	406842	406895	.	+	.	Parent=CGI_10017564;
	scaffold381	TRF	Tandem_Repeat	406842	406895	99	+	.	.
scaffold381	subtractBed	intrn	420009	420035	.	-	.	Parent=CGI_10017565;
	scaffold381	TRF	Tandem_Repeat	420009	420035	54	+	.	.
scaffold381	subtractBed	intrn	420087	420165	.	-	.	Parent=CGI_10017565;
	scaffold381	TRF	Tandem_Repeat	420087	420165	158	+	.	.
scaffold381	subtractBed	intrn	426101	426763	.	-	.	Parent=CGI_10017565;
	scaffold381	TRF	Tandem_Repeat	426101	426763	1218	+	.	.
scaffold381	subtractBed	intrn	432343	432456	.	-	.	Parent=CGI_10017566;
	scaffold381	TRF	Tandem_Repeat	432343	432456	183	+	.	.
scaffold381	subtractBed	intrn	433987	434027	.	-	.	Parent=CGI_10017566;
	scaffold381	TRF	Tandem_Repeat	433987	434027	82	+	.	.
scaffold381	subtractBed	intrn	441214	441987	.	-	.	Parent=CGI_10017566;
	scaffold381	WUBlastX	LINE_RTE-BovB	441214	441987	333	-	.	.
scaffold381	subtractBed	intrn	441996	442313	.	-	.	Parent=CGI_10017566;
	scaffold381	WUBlastX	LINE_RTE-BovB	441996	442313	373	-	.	.
scaffold381	subtractBed	intrn	442020	442397	.	-	.	Parent=CGI_10017566;
	scaffold381	WUBlastX	LINE_R2	442020	442397	72	-	.	.
scaffold381	subtractBed	intrn	442002	442592	.	-	.	Parent=CGI_10017566;
	scaffold381	WUBlastX	LINE_L1	442002	442592	29	-	.	.
scaffold38130	subtractBed	intrn	28155	28556	.	-	.	Parent=CGI_10002636;
	scaffold38130	WUBlastX	DNA_Maverick	28155	28556	110	-	.	.
scaffold38130	subtractBed	intrn	27372	27998	.	-	.	Parent=CGI_10002636;
	scaffold38130	WUBlastX	DNA_Maverick	27372	27998	296	-	.	.
scaffold38130	subtractBed	intrn	28724	29824	.	-	.	Parent=CGI_10002636;
	scaffold38130	WUBlastX	DNA_Maverick	28724	29824	372	-	.	.
scaffold38130	subtractBed	intrn	32847	33005	.	-	.	Parent=CGI_10002637;
	scaffold38130	WUBlastX	DNA_Maverick	32847	33005	24	-	.	.
scaffold38130	subtractBed	intrn	40856	40902	.	+	.	Parent=CGI_10002638;
	scaffold38130	TRF	Tandem_Repeat	40856	40902	85	+	.	.
scaffold38136	subtractBed	intrn	33647	35733	.	+	.	Parent=CGI_10002634;
	scaffold38136	TRF	Tandem_Repeat	33647	35733	1769	+	.	.
scaffold38148	subtractBed	intrn	3852	4853	.	+	.	Parent=CGI_10002640;
	scaffold38148	TRF	Tandem_Repeat	3852	4853	1406	+	.	.
scaffold38148	subtractBed	intrn	38327	38388	.	-	.	Parent=CGI_10002643;
	scaffold38148	TRF	Tandem_Repeat	38327	38388	54	+	.	.
scaffold38148	subtractBed	intrn	39776	39941	.	-	.	Parent=CGI_10002643;
	scaffold38148	TRF	Tandem_Repeat	39776	39941	129	+	.	.
scaffold38148	subtractBed	intrn	39940	40127	.	-	.	Parent=CGI_10002643;
	scaffold38148	TRF	Tandem_Repeat	39940	40127	225	+	.	.
scaffold38148	subtractBed	intrn	40010	40127	.	-	.	Parent=CGI_10002643;
	scaffold38148	TRF	Tandem_Repeat	40010	40127	130	+	.	.
scaffold38152	subtractBed	intrn	6752	9220	.	-	.	Parent=CGI_10002678;
	scaffold38152	WUBlastX	DNA_hAT-hATw	6752	9220	104	-	.	.
scaffold38152	subtractBed	intrn	6737	8071	.	-	.	Parent=CGI_10002678;
	scaffold38152	WUBlastX	DNA_hAT-hATw	6737	8071	152	-	.	.
scaffold38152	subtractBed	intrn	10532	10571	.	-	.	Parent=CGI_10002678;
	scaffold38152	TRF	Tandem_Repeat	10532	10571	53	+	.	.
scaffold38152	subtractBed	intrn	11162	11240	.	-	.	Parent=CGI_10002678;
	scaffold38152	TRF	Tandem_Repeat	11162	11240	67	+	.	.
scaffold38152	subtractBed	intrn	11174	11230	.	-	.	Parent=CGI_10002678;
	scaffold38152	TRF	Tandem_Repeat	11174	11230	69	+	.	.
scaffold38152	subtractBed	intrn	11162	11230	.	-	.	Parent=CGI_10002678;
	scaffold38152	TRF	Tandem_Repeat	11162	11230	84	+	.	.
scaffold38162	subtractBed	intrn	12190	12247	.	+	.	Parent=CGI_10002646;
	scaffold38162	TRF	Tandem_Repeat	12190	12247	116	+	.	.
scaffold38162	subtractBed	intrn	13590	13617	.	+	.	Parent=CGI_10002646;
	scaffold38162	TRF	Tandem_Repeat	13590	13617	56	+	.	.
scaffold38186	subtractBed	intrn	32049	32087	.	-	.	Parent=CGI_10002657;
	scaffold38186	TRF	Tandem_Repeat	32049	32087	78	+	.	.
scaffold38186	subtractBed	intrn	40818	40855	.	-	.	Parent=CGI_10002657;
	scaffold38186	TRF	Tandem_Repeat	40818	40855	58	+	.	.
scaffold38190	subtractBed	intrn	36075	37330	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	36075	37330	1754	+	.	.
scaffold38190	subtractBed	intrn	38854	39114	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	38854	39114	468	+	.	.
scaffold38190	subtractBed	intrn	41495	41941	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	41495	41941	366	+	.	.
scaffold38190	subtractBed	intrn	42851	43245	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	42810	43245	809	+	.	.
scaffold38190	subtractBed	intrn	43257	43969	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	43257	43969	1016	+	.	.
scaffold38190	subtractBed	intrn	44635	44753	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	44635	44753	211	+	.	.
scaffold38190	subtractBed	intrn	44888	45255	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	44888	45255	619	+	.	.
scaffold38190	subtractBed	intrn	46918	47297	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	46918	47297	634	+	.	.
scaffold38190	subtractBed	intrn	46918	47578	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	46918	47578	996	+	.	.
scaffold38190	subtractBed	intrn	46918	47578	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	46918	47578	1007	+	.	.
scaffold38190	subtractBed	intrn	47281	47323	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	47281	47323	59	+	.	.
scaffold38190	subtractBed	intrn	47299	47578	.	-	.	Parent=CGI_10002645;
	scaffold38190	TRF	Tandem_Repeat	47299	47578	434	+	.	.
scaffold38194	subtractBed	intrn	27770	27819	.	-	.	Parent=CGI_10002658;
	scaffold38194	TRF	Tandem_Repeat	27770	27819	100	+	.	.
scaffold38196	subtractBed	intrn	11325	11382	.	-	.	Parent=CGI_10002666;
	scaffold38196	TRF	Tandem_Repeat	11325	11382	116	+	.	.
scaffold38196	subtractBed	intrn	18757	18960	.	-	.	Parent=CGI_10002667;
	scaffold38196	TRF	Tandem_Repeat	18757	18960	273	+	.	.
scaffold382	subtractBed	intrn	48171	48254	.	+	.	Parent=CGI_10004503;
	scaffold382	WUBlastX	RC_Helitron	48171	48254	25	-	.	.
scaffold382	subtractBed	intrn	48304	48549	.	+	.	Parent=CGI_10004503;
	scaffold382	WUBlastX	RC_Helitron	48304	48549	27	-	.	.
scaffold382	subtractBed	intrn	41809	42723	.	+	.	Parent=CGI_10004503;
	scaffold382	WUBlastX	DNA_IS4EU	41809	42723	440	+	.	.
scaffold382	subtractBed	intrn	42766	43545	.	+	.	Parent=CGI_10004503;
	scaffold382	WUBlastX	DNA_Kolobok-IS4	42766	43545	104	-	.	.
scaffold382	subtractBed	intrn	42817	43407	.	+	.	Parent=CGI_10004503;
	scaffold382	WUBlastX	DNA_Kolobok-IS4	42817	43407	154	-	.	.
scaffold382	subtractBed	intrn	56385	56442	.	+	.	Parent=CGI_10004503;
	scaffold382	TRF	Tandem_Repeat	56385	56442	116	+	.	.
scaffold382	subtractBed	intrn	57576	57750	.	+	.	Parent=CGI_10004503;
	scaffold382	TRF	Tandem_Repeat	57576	57750	122	+	.	.
scaffold382	subtractBed	intrn	93263	93313	.	-	.	Parent=CGI_10004504;
	scaffold382	TRF	Tandem_Repeat	93263	93313	102	+	.	.
scaffold382	subtractBed	intrn	94942	94988	.	-	.	Parent=CGI_10004504;
	scaffold382	TRF	Tandem_Repeat	94942	94988	76	+	.	.
scaffold382	subtractBed	intrn	94941	94997	.	-	.	Parent=CGI_10004504;
	scaffold382	TRF	Tandem_Repeat	94941	94997	78	+	.	.
scaffold382	subtractBed	intrn	99393	99449	.	-	.	Parent=CGI_10004504;
	scaffold382	TRF	Tandem_Repeat	99393	99449	73	+	.	.
scaffold38210	subtractBed	intrn	15896	15958	.	-	.	Parent=CGI_10002673;
	scaffold38210	TRF	Tandem_Repeat	15896	15958	65	+	.	.
scaffold38210	subtractBed	intrn	15896	15937	.	-	.	Parent=CGI_10002673;
	scaffold38210	TRF	Tandem_Repeat	15896	15937	57	+	.	.
scaffold38210	subtractBed	intrn	15896	15954	.	-	.	Parent=CGI_10002673;
	scaffold38210	TRF	Tandem_Repeat	15896	15954	64	+	.	.
scaffold38210	subtractBed	intrn	18451	18500	.	-	.	Parent=CGI_10002673;
	scaffold38210	TRF	Tandem_Repeat	18451	18500	100	+	.	.
scaffold38210	subtractBed	intrn	22348	22920	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_L1	22348	22920	209	+	.	.
scaffold38210	subtractBed	intrn	24452	24586	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_Jockey	24452	24586	32	+	.	.
scaffold38210	subtractBed	intrn	22874	23455	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_L2	22874	23455	31	+	.	.
scaffold38210	subtractBed	intrn	22291	22977	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_L2	22291	22977	110	+	.	.
scaffold38210	subtractBed	intrn	23150	23869	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_RTE-X	23150	23869	144	+	.	.
scaffold38210	subtractBed	intrn	24588	24764	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_RTE-X	24588	24764	140	+	.	.
scaffold38210	subtractBed	intrn	24776	25924	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_RTE-X	24776	25924	305	+	.	.
scaffold38210	subtractBed	intrn	23552	24565	.	-	.	Parent=CGI_10002673;
	scaffold38210	WUBlastX	LINE_RTE-X	23552	24565	158	+	.	.
scaffold38272	subtractBed	intrn	13883	14786	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	13883	14786	1274	+	.	.
scaffold38272	subtractBed	intrn	27369	27420	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	27369	27420	68	+	.	.
scaffold38272	subtractBed	intrn	31161	31195	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	31161	31195	52	+	.	.
scaffold38272	subtractBed	intrn	31790	32427	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	31790	32427	767	+	.	.
scaffold38272	subtractBed	intrn	43342	43399	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	43342	43399	73	+	.	.
scaffold38272	subtractBed	intrn	43343	43399	.	+	.	Parent=CGI_10002702;
	scaffold38272	TRF	Tandem_Repeat	43343	43399	55	+	.	.
scaffold38272	subtractBed	intrn	39386	39784	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1	39386	39784	44	+	.	.
scaffold38272	subtractBed	intrn	39118	39321	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	39118	39321	24	+	.	.
scaffold38272	subtractBed	intrn	39551	39787	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	39551	39787	104	+	.	.
scaffold38272	subtractBed	intrn	38746	38937	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	38746	38937	28	+	.	.
scaffold38272	subtractBed	intrn	37953	38063	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	37953	38063	38	+	.	.
scaffold38272	subtractBed	intrn	39449	39856	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1	39449	39856	89	+	.	.
scaffold38272	subtractBed	intrn	37974	38510	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	37974	38510	119	+	.	.
scaffold38272	subtractBed	intrn	38465	38749	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	38465	38749	98	+	.	.
scaffold38272	subtractBed	intrn	48314	48436	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	48314	48436	26	+	.	.
scaffold38272	subtractBed	intrn	51317	51619	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1	51317	51619	53	+	.	.
scaffold38272	subtractBed	intrn	51377	51619	.	+	.	Parent=CGI_10002702;
	scaffold38272	WUBlastX	LINE_L1-Tx1	51377	51619	68	+	.	.
scaffold38274	subtractBed	intrn	16127	16576	.	+	.	Parent=CGI_10002704;
	scaffold38274	WUBlastX	LINE_L1	16082	16576	69	+	.	.
scaffold38274	subtractBed	intrn	16325	16621	.	+	.	Parent=CGI_10002704;
	scaffold38274	WUBlastX	LINE_RTE-X	16325	16621	50	+	.	.
scaffold38274	subtractBed	intrn	28939	28986	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	28939	28986	51	+	.	.
scaffold38274	subtractBed	intrn	29377	29446	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	29377	29446	131	+	.	.
scaffold38274	subtractBed	intrn	36309	36399	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	36309	36399	164	+	.	.
scaffold38274	subtractBed	intrn	39346	39412	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	39346	39412	62	+	.	.
scaffold38274	subtractBed	intrn	41789	41848	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	41789	41848	111	+	.	.
scaffold38274	subtractBed	intrn	48446	48503	.	+	.	Parent=CGI_10002704;
	scaffold38274	TRF	Tandem_Repeat	48446	48503	82	+	.	.
scaffold38290	subtractBed	intrn	37450	37474	.	+	.	Parent=CGI_10002705;
	scaffold38290	TRF	Tandem_Repeat	37450	37474	50	+	.	.
scaffold38290	subtractBed	intrn	43097	43134	.	+	.	Parent=CGI_10002705;
	scaffold38290	TRF	Tandem_Repeat	43097	43134	76	+	.	.
scaffold38292	subtractBed	intrn	4151	4216	.	+	.	Parent=CGI_10002690;
	scaffold38292	TRF	Tandem_Repeat	4151	4216	132	+	.	.
scaffold38292	subtractBed	intrn	4411	4452	.	+	.	Parent=CGI_10002690;
	scaffold38292	TRF	Tandem_Repeat	4411	4452	66	+	.	.
scaffold38292	subtractBed	intrn	34942	35952	.	-	.	Parent=CGI_10002691;
	scaffold38292	WUBlastX	LTR_Ngaro	34942	35952	521	-	.	.
scaffold38292	subtractBed	intrn	35916	36203	.	-	.	Parent=CGI_10002691;
	scaffold38292	WUBlastX	LTR_Ngaro	35916	36203	171	-	.	.
scaffold38292	subtractBed	intrn	34155	34910	.	-	.	Parent=CGI_10002691;
	scaffold38292	WUBlastX	LTR_Ngaro	34155	34910	265	-	.	.
scaffold38292	subtractBed	intrn	36200	36442	.	-	.	Parent=CGI_10002691;
	scaffold38292	WUBlastX	LTR_Ngaro	36200	36442	43	-	.	.
scaffold38292	subtractBed	intrn	34026	34916	.	-	.	Parent=CGI_10002691;
	scaffold38292	WUBlastX	LTR_Ngaro	34026	34916	222	-	.	.
scaffold38292	subtractBed	intrn	46431	47681	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy	46431	47681	118	+	.	.
scaffold38292	subtractBed	intrn	46434	47066	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy-Cigr	46434	47066	170	+	.	.
scaffold38292	subtractBed	intrn	46272	46946	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy	46272	46946	72	+	.	.
scaffold38292	subtractBed	intrn	46449	47204	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy	46449	47204	130	+	.	.
scaffold38292	subtractBed	intrn	46410	46913	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy-Cigr	46410	46913	190	+	.	.
scaffold38292	subtractBed	intrn	47397	47750	.	+	.	Parent=CGI_10002692;
	scaffold38292	WUBlastX	LTR_Gypsy	47397	47750	88	+	.	.
scaffold38298	subtractBed	intrn	48226	48296	.	+	.	Parent=CGI_10002689;
	scaffold38298	TRF	Tandem_Repeat	48226	48296	133	+	.	.
scaffold38298	subtractBed	intrn	48963	49133	.	+	.	Parent=CGI_10002689;
	scaffold38298	TRF	Tandem_Repeat	48963	49133	102	+	.	.
scaffold383	subtractBed	intrn	6818	6873	.	-	.	Parent=CGI_10023515;
	scaffold383	TRF	Tandem_Repeat	6818	6873	112	+	.	.
scaffold383	subtractBed	intrn	12233	12281	.	-	.	Parent=CGI_10023515;
	scaffold383	TRF	Tandem_Repeat	12233	12281	98	+	.	.
scaffold383	subtractBed	intrn	18788	18845	.	-	.	Parent=CGI_10023515;
	scaffold383	TRF	Tandem_Repeat	18788	18845	75	+	.	.
scaffold383	subtractBed	intrn	19896	19942	.	-	.	Parent=CGI_10023515;
	scaffold383	TRF	Tandem_Repeat	19896	19942	94	+	.	.
scaffold383	subtractBed	intrn	20869	21171	.	-	.	Parent=CGI_10023515;
	scaffold383	TRF	Tandem_Repeat	20869	21171	563	+	.	.
scaffold383	subtractBed	intrn	84900	84967	.	+	.	Parent=CGI_10023517;
	scaffold383	TRF	Tandem_Repeat	84900	84967	64	+	.	.
scaffold383	subtractBed	intrn	84891	84966	.	+	.	Parent=CGI_10023517;
	scaffold383	TRF	Tandem_Repeat	84891	84966	89	+	.	.
scaffold383	subtractBed	intrn	84892	84967	.	+	.	Parent=CGI_10023517;
	scaffold383	TRF	Tandem_Repeat	84892	84967	98	+	.	.
scaffold383	subtractBed	intrn	94854	95201	.	-	.	Parent=CGI_10023518;
	scaffold383	TRF	Tandem_Repeat	94854	95201	597	+	.	.
scaffold383	subtractBed	intrn	131158	131199	.	+	.	Parent=CGI_10023521;
	scaffold383	TRF	Tandem_Repeat	131158	131199	84	+	.	.
scaffold383	subtractBed	intrn	132847	132878	.	+	.	Parent=CGI_10023521;
	scaffold383	TRF	Tandem_Repeat	132847	132878	64	+	.	.
scaffold383	subtractBed	intrn	160298	160346	.	+	.	Parent=CGI_10023522;
	scaffold383	TRF	Tandem_Repeat	160298	160346	98	+	.	.
scaffold383	subtractBed	intrn	177497	177559	.	+	.	Parent=CGI_10023524;
	scaffold383	TRF	Tandem_Repeat	177497	177559	90	+	.	.
scaffold383	subtractBed	intrn	180221	180324	.	+	.	Parent=CGI_10023524;
	scaffold383	TRF	Tandem_Repeat	180221	180324	95	+	.	.
scaffold383	subtractBed	intrn	180222	180326	.	+	.	Parent=CGI_10023524;
	scaffold383	TRF	Tandem_Repeat	180222	180326	120	+	.	.
scaffold383	subtractBed	intrn	181543	181613	.	+	.	Parent=CGI_10023524;
	scaffold383	TRF	Tandem_Repeat	181543	181613	56	+	.	.
scaffold383	subtractBed	intrn	182362	182409	.	+	.	Parent=CGI_10023524;
	scaffold383	TRF	Tandem_Repeat	182362	182409	96	+	.	.
scaffold383	subtractBed	intrn	296191	296246	.	+	.	Parent=CGI_10023533;
	scaffold383	TRF	Tandem_Repeat	296191	296246	112	+	.	.
scaffold383	subtractBed	intrn	297398	297443	.	+	.	Parent=CGI_10023533;
	scaffold383	TRF	Tandem_Repeat	297398	297443	92	+	.	.
scaffold383	subtractBed	intrn	308447	309223	.	+	.	Parent=CGI_10023533;
	scaffold383	TRF	Tandem_Repeat	308447	309223	1072	+	.	.
scaffold383	subtractBed	intrn	308444	309223	.	+	.	Parent=CGI_10023533;
	scaffold383	TRF	Tandem_Repeat	308444	309223	1104	+	.	.
scaffold383	subtractBed	intrn	321175	321863	.	+	.	Parent=CGI_10023535;
	scaffold383	TRF	Tandem_Repeat	321175	321863	1130	+	.	.
scaffold383	subtractBed	intrn	381016	381059	.	-	.	Parent=CGI_10023538;
	scaffold383	TRF	Tandem_Repeat	381016	381059	88	+	.	.
scaffold383	subtractBed	intrn	511852	512040	.	-	.	Parent=CGI_10023546;
	scaffold383	TRF	Tandem_Repeat	511852	512040	179	+	.	.
scaffold383	subtractBed	intrn	558097	558158	.	+	.	Parent=CGI_10023547;
	scaffold383	TRF	Tandem_Repeat	558097	558158	124	+	.	.
scaffold383	subtractBed	intrn	570215	570287	.	-	.	Parent=CGI_10023548;
	scaffold383	TRF	Tandem_Repeat	570215	570287	137	+	.	.
scaffold383	subtractBed	intrn	575223	575291	.	-	.	Parent=CGI_10023548;
	scaffold383	TRF	Tandem_Repeat	575223	575291	129	+	.	.
scaffold383	subtractBed	intrn	641121	641192	.	+	.	Parent=CGI_10023550;
	scaffold383	TRF	Tandem_Repeat	641121	641192	135	+	.	.
scaffold383	subtractBed	intrn	641449	641519	.	+	.	Parent=CGI_10023550;
	scaffold383	TRF	Tandem_Repeat	641449	641519	133	+	.	.
scaffold383	subtractBed	intrn	701100	701136	.	+	.	Parent=CGI_10023552;
	scaffold383	TRF	Tandem_Repeat	701100	701136	65	+	.	.
scaffold383	subtractBed	intrn	720518	720566	.	+	.	Parent=CGI_10023552;
	scaffold383	TRF	Tandem_Repeat	720518	720566	98	+	.	.
scaffold383	subtractBed	intrn	724734	724776	.	+	.	Parent=CGI_10023552;
	scaffold383	TRF	Tandem_Repeat	724734	724776	86	+	.	.
scaffold383	subtractBed	intrn	728612	728687	.	+	.	Parent=CGI_10023552;
	scaffold383	TRF	Tandem_Repeat	728612	728687	93	+	.	.
scaffold383	subtractBed	intrn	742975	743841	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	742975	743841	1043	+	.	.
scaffold383	subtractBed	intrn	756309	756455	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	756309	756455	68	+	.	.
scaffold383	subtractBed	intrn	756450	756555	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	756450	756555	88	+	.	.
scaffold383	subtractBed	intrn	756314	756555	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	756314	756555	177	+	.	.
scaffold383	subtractBed	intrn	756321	756578	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	756321	756578	101	+	.	.
scaffold383	subtractBed	intrn	756504	756578	.	+	.	Parent=CGI_10023553;
	scaffold383	TRF	Tandem_Repeat	756504	756578	66	+	.	.
scaffold383	subtractBed	intrn	754683	755807	.	+	.	Parent=CGI_10023553;
	scaffold383	WUBlastX	DNA_Sola	754683	755807	254	+	.	.
scaffold383	subtractBed	intrn	754251	755858	.	+	.	Parent=CGI_10023553;
	scaffold383	WUBlastX	DNA_Sola	754251	755858	232	+	.	.
scaffold383	subtractBed	intrn	754623	756008	.	+	.	Parent=CGI_10023553;
	scaffold383	WUBlastX	DNA_Sola	754623	756008	247	+	.	.
scaffold38306	subtractBed	intrn	8854	9009	.	-	.	Parent=CGI_10002711;
	scaffold38306	WUBlastX	DNA_Harbinger	8854	9009	100	-	.	.
scaffold38306	subtractBed	intrn	7154	7537	.	-	.	Parent=CGI_10002711;
	scaffold38306	WUBlastX	LINE_L1	7154	7537	62	+	.	.
scaffold38306	subtractBed	intrn	7256	7525	.	-	.	Parent=CGI_10002711;
	scaffold38306	WUBlastX	LINE_L1-Tx1	7256	7525	192	+	.	.
scaffold38306	subtractBed	intrn	10233	10745	.	-	.	Parent=CGI_10002711;
	scaffold38306	WUBlastX	DNA_Harbinger	10233	10745	89	-	.	.
scaffold38306	subtractBed	intrn	7256	7615	.	-	.	Parent=CGI_10002711;
	scaffold38306	WUBlastX	LINE_L1-Tx1	7256	7615	86	+	.	.
scaffold38306	subtractBed	intrn	47094	47124	.	+	.	Parent=CGI_10002714;
	scaffold38306	TRF	Tandem_Repeat	47094	47124	53	+	.	.
scaffold38348	subtractBed	intrn	13055	13097	.	-	.	Parent=CGI_10002707;
	scaffold38348	TRF	Tandem_Repeat	13055	13097	68	+	.	.
scaffold38348	subtractBed	intrn	25592	25664	.	-	.	Parent=CGI_10002707;
	scaffold38348	TRF	Tandem_Repeat	25592	25664	119	+	.	.
scaffold38348	subtractBed	intrn	25744	25795	.	-	.	Parent=CGI_10002707;
	scaffold38348	TRF	Tandem_Repeat	25744	25795	77	+	.	.
scaffold38348	subtractBed	intrn	44515	44631	.	+	.	Parent=CGI_10002708;
	scaffold38348	TRF	Tandem_Repeat	44515	44631	139	+	.	.
scaffold38348	subtractBed	intrn	44869	45240	.	+	.	Parent=CGI_10002708;
	scaffold38348	TRF	Tandem_Repeat	44869	45240	564	+	.	.
scaffold38354	subtractBed	intrn	24939	25027	.	-	.	Parent=CGI_10002723;
	scaffold38354	TRF	Tandem_Repeat	24939	25027	106	+	.	.
scaffold38354	subtractBed	intrn	25054	25191	.	-	.	Parent=CGI_10002723;
	scaffold38354	TRF	Tandem_Repeat	25054	25191	107	+	.	.
scaffold38354	subtractBed	intrn	24939	25027	.	+	.	Parent=CGI_10002724;
	scaffold38354	TRF	Tandem_Repeat	24939	25027	106	+	.	.
scaffold38354	subtractBed	intrn	25054	25191	.	+	.	Parent=CGI_10002724;
	scaffold38354	TRF	Tandem_Repeat	25054	25191	107	+	.	.
scaffold38354	subtractBed	intrn	37479	37551	.	+	.	Parent=CGI_10002726;
	scaffold38354	TRF	Tandem_Repeat	37479	37551	58	+	.	.
scaffold38370	subtractBed	intrn	9628	9660	.	+	.	Parent=CGI_10002738;
	scaffold38370	TRF	Tandem_Repeat	9628	9660	66	+	.	.
scaffold38370	subtractBed	intrn	28268	28336	.	-	.	Parent=CGI_10002740;
	scaffold38370	TRF	Tandem_Repeat	28268	28336	138	+	.	.
scaffold38372	subtractBed	intrn	8564	9829	.	-	.	Parent=CGI_10002748;
	scaffold38372	TRF	Tandem_Repeat	8564	9829	1984	+	.	.
scaffold38372	subtractBed	intrn	10070	10276	.	-	.	Parent=CGI_10002748;
	scaffold38372	TRF	Tandem_Repeat	10070	10276	360	+	.	.
scaffold38374	subtractBed	intrn	8396	8436	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Ngaro	8113	8436	65	+	.	.
scaffold38374	subtractBed	intrn	8427	8516	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Ngaro	8427	8516	26	+	.	.
scaffold38374	subtractBed	intrn	14792	15484	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy-Cigr	14792	15484	209	+	.	.
scaffold38374	subtractBed	intrn	14630	15463	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	14630	15463	50	+	.	.
scaffold38374	subtractBed	intrn	14130	14639	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	14130	14639	64	+	.	.
scaffold38374	subtractBed	intrn	15058	16221	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	15058	16221	453	+	.	.
scaffold38374	subtractBed	intrn	13896	14594	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	13896	14594	26	+	.	.
scaffold38374	subtractBed	intrn	14043	14606	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	14043	14606	43	+	.	.
scaffold38374	subtractBed	intrn	16404	17153	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	16404	17153	441	+	.	.
scaffold38374	subtractBed	intrn	17159	17557	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy-Cigr	17159	17557	97	+	.	.
scaffold38374	subtractBed	intrn	16215	17153	.	+	.	Parent=CGI_10002746;
	scaffold38374	WUBlastX	LTR_Gypsy	16215	17153	288	+	.	.
scaffold38376	subtractBed	intrn	37072	37110	.	+	.	Parent=CGI_10002735;
	scaffold38376	TRF	Tandem_Repeat	37072	37110	51	+	.	.
scaffold38382	subtractBed	intrn	22711	22786	.	+	.	Parent=CGI_10002755;
	scaffold38382	TRF	Tandem_Repeat	22711	22786	152	+	.	.
scaffold38400	subtractBed	intrn	37145	37321	.	-	.	Parent=CGI_10002763;
	scaffold38400	TRF	Tandem_Repeat	37145	37321	70	+	.	.
scaffold38400	subtractBed	intrn	38269	38294	.	-	.	Parent=CGI_10002763;
	scaffold38400	TRF	Tandem_Repeat	38269	38294	52	+	.	.
scaffold38400	subtractBed	intrn	40854	40907	.	-	.	Parent=CGI_10002763;
	scaffold38400	TRF	Tandem_Repeat	40854	40907	99	+	.	.
scaffold38422	subtractBed	intrn	30422	30562	.	-	.	Parent=CGI_10002764;
	scaffold38422	WUBlastX	LINE_CR1	30422	30562	51	-	.	.
scaffold38422	subtractBed	intrn	30413	30538	.	-	.	Parent=CGI_10002764;
	scaffold38422	WUBlastX	LINE_CR1	30413	30538	80	-	.	.
scaffold38422	subtractBed	intrn	30419	30601	.	-	.	Parent=CGI_10002764;
	scaffold38422	WUBlastX	LINE_CR1	30419	30601	40	-	.	.
scaffold38422	subtractBed	intrn	30377	30535	.	-	.	Parent=CGI_10002764;
	scaffold38422	WUBlastX	LINE_L2	30377	30535	46	-	.	.
scaffold38422	subtractBed	intrn	39792	39828	.	-	.	Parent=CGI_10002766;
	scaffold38422	TRF	Tandem_Repeat	39792	39828	74	+	.	.
scaffold38422	subtractBed	intrn	41074	41119	.	-	.	Parent=CGI_10002766;
	scaffold38422	TRF	Tandem_Repeat	41074	41119	92	+	.	.
scaffold38448	subtractBed	intrn	36643	36682	.	+	.	Parent=CGI_10002779;
	scaffold38448	TRF	Tandem_Repeat	36643	36682	80	+	.	.
scaffold38448	subtractBed	intrn	33487	34740	.	+	.	Parent=CGI_10002779;
	scaffold38448	WUBlastX	LTR_Ngaro	33487	34740	144	-	.	.
scaffold38448	subtractBed	intrn	34755	34985	.	+	.	Parent=CGI_10002779;
	scaffold38448	WUBlastX	LTR_Ngaro	34755	34985	62	-	.	.
scaffold38448	subtractBed	intrn	34755	34898	.	+	.	Parent=CGI_10002779;
	scaffold38448	WUBlastX	LTR_Ngaro	34755	34898	68	-	.	.
scaffold38448	subtractBed	intrn	32634	33083	.	+	.	Parent=CGI_10002779;
	scaffold38448	WUBlastX	LTR_Ngaro	32634	33083	108	-	.	.
scaffold38458	subtractBed	intrn	32379	32478	.	-	.	Parent=CGI_10002783;
	scaffold38458	TRF	Tandem_Repeat	32379	32478	110	+	.	.
scaffold38458	subtractBed	intrn	36430	36485	.	-	.	Parent=CGI_10002783;
	scaffold38458	TRF	Tandem_Repeat	36430	36485	112	+	.	.
scaffold38458	subtractBed	intrn	40688	40738	.	-	.	Parent=CGI_10002783;
	scaffold38458	TRF	Tandem_Repeat	40688	40738	50	+	.	.
scaffold38458	subtractBed	intrn	41193	41226	.	-	.	Parent=CGI_10002783;
	scaffold38458	TRF	Tandem_Repeat	41193	41226	50	+	.	.
scaffold38458	subtractBed	intrn	45492	45540	.	-	.	Parent=CGI_10002783;
	scaffold38458	TRF	Tandem_Repeat	45492	45540	55	+	.	.
scaffold38458	subtractBed	intrn	40688	40738	.	+	.	Parent=CGI_10002784;
	scaffold38458	TRF	Tandem_Repeat	40688	40738	50	+	.	.
scaffold38458	subtractBed	intrn	41193	41226	.	+	.	Parent=CGI_10002784;
	scaffold38458	TRF	Tandem_Repeat	41193	41226	50	+	.	.
scaffold38458	subtractBed	intrn	45492	45540	.	+	.	Parent=CGI_10002784;
	scaffold38458	TRF	Tandem_Repeat	45492	45540	55	+	.	.
scaffold38458	subtractBed	intrn	52861	53226	.	+	.	Parent=CGI_10002784;
	scaffold38458	WUBlastX	DNA_Harbinger	52861	53226	123	+	.	.
scaffold38458	subtractBed	intrn	53846	53965	.	+	.	Parent=CGI_10002784;
	scaffold38458	WUBlastX	DNA_Harbinger	53846	53965	107	+	.	.
scaffold38458	subtractBed	intrn	53837	53986	.	+	.	Parent=CGI_10002784;
	scaffold38458	WUBlastX	DNA_Harbinger	53837	53986	64	+	.	.
scaffold38458	subtractBed	intrn	52840	53298	.	+	.	Parent=CGI_10002784;
	scaffold38458	WUBlastX	DNA_Harbinger	52840	53298	107	+	.	.
scaffold38464	subtractBed	intrn	32260	32370	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	32260	32370	20	-	.	.
scaffold38464	subtractBed	intrn	30440	30691	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	30440	30691	156	-	.	.
scaffold38464	subtractBed	intrn	31194	31346	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	31194	31346	87	-	.	.
scaffold38464	subtractBed	intrn	30697	31179	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	30697	31179	224	-	.	.
scaffold38464	subtractBed	intrn	31268	31753	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	31268	31753	337	-	.	.
scaffold38464	subtractBed	intrn	31738	31998	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	31738	31998	89	-	.	.
scaffold38464	subtractBed	intrn	29526	30398	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	29526	30398	454	-	.	.
scaffold38464	subtractBed	intrn	32323	32370	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	32323	32370	22	-	.	.
scaffold38464	subtractBed	intrn	32366	32746	.	-	.	Parent=CGI_10002793;
	scaffold38464	WUBlastX	LTR_Ngaro	32366	32746	153	-	.	.
scaffold38466	subtractBed	intrn	3684	3688	.	+	.	Parent=CGI_10002797;
	scaffold38466	WUBlastX	DNA_Kolobok-Hyd	3620	3688	23	+	.	.
scaffold38466	subtractBed	intrn	16442	16645	.	+	.	Parent=CGI_10002798;
	scaffold38466	WUBlastX	DNA_Zator	16442	16645	66	-	.	.
scaffold38466	subtractBed	intrn	16782	16874	.	+	.	Parent=CGI_10002798;
	scaffold38466	WUBlastX	DNA_Zator	16782	16874	25	-	.	.
scaffold38466	subtractBed	intrn	28697	28733	.	+	.	Parent=CGI_10002798;
	scaffold38466	TRF	Tandem_Repeat	28697	28733	74	+	.	.
scaffold38494	subtractBed	intrn	11920	12131	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	11920	12131	243	+	.	.
scaffold38494	subtractBed	intrn	21779	21829	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	21779	21829	102	+	.	.
scaffold38494	subtractBed	intrn	31861	31910	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	31861	31910	100	+	.	.
scaffold38494	subtractBed	intrn	35930	37072	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	35930	37072	1531	+	.	.
scaffold38494	subtractBed	intrn	40828	40883	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	40828	40883	112	+	.	.
scaffold38494	subtractBed	intrn	44974	45103	.	+	.	Parent=CGI_10002806;
	scaffold38494	TRF	Tandem_Repeat	44974	45103	156	+	.	.
scaffold38494	subtractBed	intrn	54802	54816	.	+	.	Parent=CGI_10002806;
	scaffold38494	WUBlastX	LINE_L2	54802	55128	61	+	.	.
scaffold38498	subtractBed	intrn	25221	25445	.	+	.	Parent=CGI_10002819;
	scaffold38498	TRF	Tandem_Repeat	25221	25445	351	+	.	.
scaffold38498	subtractBed	intrn	26711	27485	.	+	.	Parent=CGI_10002819;
	scaffold38498	TRF	Tandem_Repeat	26711	27485	810	+	.	.
scaffold38498	subtractBed	intrn	26711	27485	.	+	.	Parent=CGI_10002819;
	scaffold38498	TRF	Tandem_Repeat	26711	27485	744	+	.	.
scaffold385	subtractBed	intrn	8677	8729	.	+	.	Parent=CGI_10011594;
	scaffold385	TRF	Tandem_Repeat	8677	8729	99	+	.	.
scaffold385	subtractBed	intrn	138566	138745	.	-	.	Parent=CGI_10011596;
	scaffold385	WUBlastX	LINE_CR1	138566	138745	34	+	.	.
scaffold385	subtractBed	intrn	138372	138572	.	-	.	Parent=CGI_10011596;
	scaffold385	WUBlastX	LINE_CR1	138372	138572	39	+	.	.
scaffold385	subtractBed	intrn	138721	138831	.	-	.	Parent=CGI_10011596;
	scaffold385	WUBlastX	LINE_CR1	138721	138831	26	+	.	.
scaffold385	subtractBed	intrn	161645	161788	.	-	.	Parent=CGI_10011599;
	scaffold385	TRF	Tandem_Repeat	161645	161788	216	+	.	.
scaffold385	subtractBed	intrn	162172	162237	.	-	.	Parent=CGI_10011599;
	scaffold385	TRF	Tandem_Repeat	162172	162237	132	+	.	.
scaffold385	subtractBed	intrn	276652	277014	.	-	.	Parent=CGI_10011601;
	scaffold385	WUBlastX	DNA_TcMar-Tc1	276652	277014	80	+	.	.
scaffold385	subtractBed	intrn	276034	276102	.	-	.	Parent=CGI_10011601;
	scaffold385	WUBlastX	DNA_TcMar-Tc1	276034	276102	22	+	.	.
scaffold385	subtractBed	intrn	276655	276936	.	-	.	Parent=CGI_10011601;
	scaffold385	WUBlastX	DNA_TcMar-Tc1	276655	276936	99	+	.	.
scaffold385	subtractBed	intrn	275556	275648	.	-	.	Parent=CGI_10011601;
	scaffold385	WUBlastX	DNA_TcMar-Tc1	275556	275648	24	+	.	.
scaffold385	subtractBed	intrn	276059	276652	.	-	.	Parent=CGI_10011601;
	scaffold385	WUBlastX	DNA_TcMar-Tc1	276059	276652	44	+	.	.
scaffold385	subtractBed	intrn	283602	283645	.	-	.	Parent=CGI_10011601;
	scaffold385	TRF	Tandem_Repeat	283602	283645	70	+	.	.
scaffold385	subtractBed	intrn	283615	283648	.	-	.	Parent=CGI_10011601;
	scaffold385	TRF	Tandem_Repeat	283615	283648	50	+	.	.
scaffold38510	subtractBed	intrn	7560	7611	.	-	.	Parent=CGI_10002810;
	scaffold38510	TRF	Tandem_Repeat	7560	7611	79	+	.	.
scaffold38510	subtractBed	intrn	15417	15518	.	-	.	Parent=CGI_10002810;
	scaffold38510	TRF	Tandem_Repeat	15417	15518	59	+	.	.
scaffold38510	subtractBed	intrn	15411	15519	.	-	.	Parent=CGI_10002810;
	scaffold38510	TRF	Tandem_Repeat	15411	15519	85	+	.	.
scaffold38510	subtractBed	intrn	18479	18528	.	-	.	Parent=CGI_10002810;
	scaffold38510	TRF	Tandem_Repeat	18479	18528	100	+	.	.
scaffold38510	subtractBed	intrn	20028	20267	.	-	.	Parent=CGI_10002810;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20028	20267	99	-	.	.
scaffold38510	subtractBed	intrn	20690	20794	.	-	.	Parent=CGI_10002810;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20690	20794	24	-	.	.
scaffold38510	subtractBed	intrn	20636	20773	.	-	.	Parent=CGI_10002810;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20636	20773	35	-	.	.
scaffold38510	subtractBed	intrn	19997	20395	.	-	.	Parent=CGI_10002810;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	19997	20395	35	-	.	.
scaffold38510	subtractBed	intrn	20678	20806	.	-	.	Parent=CGI_10002810;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20678	20854	22	-	.	.
scaffold38510	subtractBed	intrn	18479	18528	.	+	.	Parent=CGI_10002811;
	scaffold38510	TRF	Tandem_Repeat	18479	18528	100	+	.	.
scaffold38510	subtractBed	intrn	20028	20267	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20028	20267	99	-	.	.
scaffold38510	subtractBed	intrn	20690	20794	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20690	20794	24	-	.	.
scaffold38510	subtractBed	intrn	20636	20773	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20636	20773	35	-	.	.
scaffold38510	subtractBed	intrn	19997	20395	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	19997	20395	35	-	.	.
scaffold38510	subtractBed	intrn	20678	20806	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_TcMar-Tc1	20678	20854	22	-	.	.
scaffold38510	subtractBed	intrn	22945	23315	.	+	.	Parent=CGI_10002811;
	scaffold38510	TRF	Tandem_Repeat	22945	23315	442	+	.	.
scaffold38510	subtractBed	intrn	24031	24559	.	+	.	Parent=CGI_10002811;
	scaffold38510	TRF	Tandem_Repeat	24031	24559	637	+	.	.
scaffold38510	subtractBed	intrn	24031	24559	.	+	.	Parent=CGI_10002811;
	scaffold38510	TRF	Tandem_Repeat	24031	24559	683	+	.	.
scaffold38510	subtractBed	intrn	24013	24559	.	+	.	Parent=CGI_10002811;
	scaffold38510	TRF	Tandem_Repeat	24013	24559	671	+	.	.
scaffold38510	subtractBed	intrn	24590	24946	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	24590	24946	43	+	.	.
scaffold38510	subtractBed	intrn	31148	31480	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	31148	31480	120	+	.	.
scaffold38510	subtractBed	intrn	28327	28410	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	28327	28410	28	+	.	.
scaffold38510	subtractBed	intrn	28534	28995	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	28534	28995	23	+	.	.
scaffold38510	subtractBed	intrn	29349	29459	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	29349	29459	22	+	.	.
scaffold38510	subtractBed	intrn	27743	27997	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	27743	27997	86	+	.	.
scaffold38510	subtractBed	intrn	28684	28986	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	28684	28986	131	+	.	.
scaffold38510	subtractBed	intrn	30674	30877	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	30674	30877	136	+	.	.
scaffold38510	subtractBed	intrn	30638	30829	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	30638	30829	46	+	.	.
scaffold38510	subtractBed	intrn	29367	29462	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	29367	29462	24	+	.	.
scaffold38510	subtractBed	intrn	29630	29857	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	29630	29857	41	+	.	.
scaffold38510	subtractBed	intrn	31622	32182	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	31622	32182	56	+	.	.
scaffold38510	subtractBed	intrn	30716	30910	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	30716	30910	26	+	.	.
scaffold38510	subtractBed	intrn	30058	30306	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	30058	30306	171	+	.	.
scaffold38510	subtractBed	intrn	31742	32158	.	+	.	Parent=CGI_10002811;
	scaffold38510	WUBlastX	DNA_Sola	31742	32158	120	+	.	.
scaffold38532	subtractBed	intrn	50689	50720	.	-	.	Parent=CGI_10002832;
	scaffold38532	TRF	Tandem_Repeat	50689	50720	64	+	.	.
scaffold38532	subtractBed	intrn	55174	55320	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	55174	55320	28	-	.	.
scaffold38532	subtractBed	intrn	54971	55102	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	54971	55102	49	-	.	.
scaffold38532	subtractBed	intrn	55506	56339	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	55506	56339	165	-	.	.
scaffold38532	subtractBed	intrn	55749	56339	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	55749	56339	171	-	.	.
scaffold38532	subtractBed	intrn	56511	56702	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	56511	56702	83	-	.	.
scaffold38532	subtractBed	intrn	56562	56717	.	-	.	Parent=CGI_10002832;
	scaffold38532	WUBlastX	LTR_Ngaro	56562	56717	89	-	.	.
scaffold38546	subtractBed	intrn	47081	47521	.	+	.	Parent=CGI_10002836;
	scaffold38546	TRF	Tandem_Repeat	47044	47521	929	+	.	.
scaffold38552	subtractBed	intrn	40759	41754	.	+	.	Parent=CGI_10002839;
	scaffold38552	WUBlastX	DNA_TcMar-Tc2	40759	41754	179	+	.	.
scaffold38552	subtractBed	intrn	40930	41754	.	+	.	Parent=CGI_10002839;
	scaffold38552	WUBlastX	DNA_TcMar-Tc2	40930	41754	196	+	.	.
scaffold38558	subtractBed	intrn	23265	23307	.	+	.	Parent=CGI_10002829;
	scaffold38558	TRF	Tandem_Repeat	23265	23307	86	+	.	.
scaffold38558	subtractBed	intrn	25136	25200	.	+	.	Parent=CGI_10002829;
	scaffold38558	TRF	Tandem_Repeat	25136	25200	130	+	.	.
scaffold38558	subtractBed	intrn	34931	34982	.	+	.	Parent=CGI_10002830;
	scaffold38558	TRF	Tandem_Repeat	34931	34982	104	+	.	.
scaffold38558	subtractBed	intrn	34982	35010	.	+	.	Parent=CGI_10002830;
	scaffold38558	TRF	Tandem_Repeat	34982	35010	58	+	.	.
scaffold38568	subtractBed	intrn	4214	4347	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	4214	4347	73	+	.	.
scaffold38568	subtractBed	intrn	4212	4292	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	4212	4292	85	+	.	.
scaffold38568	subtractBed	intrn	4214	4342	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	4214	4342	93	+	.	.
scaffold38568	subtractBed	intrn	4225	4308	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	4225	4308	71	+	.	.
scaffold38568	subtractBed	intrn	4213	4312	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	4213	4312	56	+	.	.
scaffold38568	subtractBed	intrn	7683	7750	.	+	.	Parent=CGI_10002861;
	scaffold38568	TRF	Tandem_Repeat	7683	7750	127	+	.	.
scaffold38568	subtractBed	intrn	18725	18927	.	-	.	Parent=CGI_10002862;
	scaffold38568	TRF	Tandem_Repeat	18725	18927	298	+	.	.
scaffold38568	subtractBed	intrn	20921	20967	.	-	.	Parent=CGI_10002862;
	scaffold38568	TRF	Tandem_Repeat	20921	20967	62	+	.	.
scaffold38568	subtractBed	intrn	29278	29315	.	+	.	Parent=CGI_10002863;
	scaffold38568	TRF	Tandem_Repeat	29278	29315	76	+	.	.
scaffold38576	subtractBed	intrn	12907	13633	.	-	.	Parent=CGI_10002841;
	scaffold38576	TRF	Tandem_Repeat	12907	13633	1063	+	.	.
scaffold38576	subtractBed	intrn	16673	16722	.	-	.	Parent=CGI_10002841;
	scaffold38576	TRF	Tandem_Repeat	16673	16722	73	+	.	.
scaffold386	subtractBed	intrn	87102	87482	.	-	.	Parent=CGI_10012681;
	scaffold386	WUBlastX	DNA_TcMar-Marin	87102	87482	68	+	.	.
scaffold386	subtractBed	intrn	87207	87461	.	-	.	Parent=CGI_10012681;
	scaffold386	WUBlastX	DNA_TcMar-Marin	87207	87461	70	+	.	.
scaffold386	subtractBed	intrn	98395	98444	.	-	.	Parent=CGI_10012681;
	scaffold386	TRF	Tandem_Repeat	98395	98444	100	+	.	.
scaffold386	subtractBed	intrn	100729	100785	.	-	.	Parent=CGI_10012681;
	scaffold386	TRF	Tandem_Repeat	100729	100785	80	+	.	.
scaffold386	subtractBed	intrn	100732	100785	.	-	.	Parent=CGI_10012681;
	scaffold386	TRF	Tandem_Repeat	100732	100785	65	+	.	.
scaffold386	subtractBed	intrn	98395	98444	.	+	.	Parent=CGI_10012682;
	scaffold386	TRF	Tandem_Repeat	98395	98444	100	+	.	.
scaffold386	subtractBed	intrn	122586	122710	.	-	.	Parent=CGI_10012685;
	scaffold386	TRF	Tandem_Repeat	122586	122710	133	+	.	.
scaffold386	subtractBed	intrn	122617	122734	.	-	.	Parent=CGI_10012685;
	scaffold386	TRF	Tandem_Repeat	122617	122734	128	+	.	.
scaffold386	subtractBed	intrn	122736	122904	.	-	.	Parent=CGI_10012685;
	scaffold386	TRF	Tandem_Repeat	122736	122904	167	+	.	.
scaffold386	subtractBed	intrn	140511	140538	.	-	.	Parent=CGI_10012685;
	scaffold386	TRF	Tandem_Repeat	140511	140538	56	+	.	.
scaffold386	subtractBed	intrn	159758	159795	.	+	.	Parent=CGI_10012686;
	scaffold386	TRF	Tandem_Repeat	159758	159795	76	+	.	.
scaffold386	subtractBed	intrn	169527	169612	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	169527	169612	129	+	.	.
scaffold386	subtractBed	intrn	172495	172562	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	172495	172562	136	+	.	.
scaffold386	subtractBed	intrn	173124	173197	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	173124	173197	148	+	.	.
scaffold386	subtractBed	intrn	180700	180742	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	180700	180742	86	+	.	.
scaffold386	subtractBed	intrn	184803	184891	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	184803	184891	171	+	.	.
scaffold386	subtractBed	intrn	186436	186462	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	186436	186462	54	+	.	.
scaffold386	subtractBed	intrn	186506	186545	.	-	.	Parent=CGI_10012687;
	scaffold386	TRF	Tandem_Repeat	186506	186545	80	+	.	.
scaffold386	subtractBed	intrn	209171	209348	.	-	.	Parent=CGI_10012689;
	scaffold386	TRF	Tandem_Repeat	209171	209348	71	+	.	.
scaffold386	subtractBed	intrn	210522	210573	.	-	.	Parent=CGI_10012689;
	scaffold386	TRF	Tandem_Repeat	210522	210573	104	+	.	.
scaffold386	subtractBed	intrn	210769	210794	.	-	.	Parent=CGI_10012689;
	scaffold386	TRF	Tandem_Repeat	210769	210794	52	+	.	.
scaffold386	subtractBed	intrn	211376	211888	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_Kolobok-IS4	211376	211888	76	+	.	.
scaffold386	subtractBed	intrn	211526	211885	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_IS4EU	211526	211885	90	+	.	.
scaffold386	subtractBed	intrn	214396	215523	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_Kolobok-IS4	214396	215523	534	-	.	.
scaffold386	subtractBed	intrn	212543	213097	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_Kolobok-IS4	212543	213097	32	+	.	.
scaffold386	subtractBed	intrn	212915	213151	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_IS4EU	212915	213151	44	+	.	.
scaffold386	subtractBed	intrn	217085	217262	.	-	.	Parent=CGI_10012689;
	scaffold386	TRF	Tandem_Repeat	217085	217262	80	+	.	.
scaffold386	subtractBed	intrn	217134	217262	.	-	.	Parent=CGI_10012689;
	scaffold386	TRF	Tandem_Repeat	217134	217262	77	+	.	.
scaffold386	subtractBed	intrn	216286	216573	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_IS4EU	216286	216573	33	-	.	.
scaffold386	subtractBed	intrn	216253	216513	.	-	.	Parent=CGI_10012689;
	scaffold386	WUBlastX	DNA_Kolobok-IS4	216253	216513	54	-	.	.
scaffold386	subtractBed	intrn	258505	258554	.	-	.	Parent=CGI_10012692;
	scaffold386	TRF	Tandem_Repeat	258505	258554	100	+	.	.
scaffold386	subtractBed	intrn	264447	264475	.	-	.	Parent=CGI_10012692;
	scaffold386	TRF	Tandem_Repeat	264447	264475	58	+	.	.
scaffold386	subtractBed	intrn	261977	262420	.	-	.	Parent=CGI_10012692;
	scaffold386	TRF	Tandem_Repeat	261977	262420	304	+	.	.
scaffold386	subtractBed	intrn	272617	273309	.	-	.	Parent=CGI_10012692;
	scaffold386	WUBlastX	LTR_Gypsy	272617	273309	87	+	.	.
scaffold386	subtractBed	intrn	282227	282295	.	-	.	Parent=CGI_10012692;
	scaffold386	TRF	Tandem_Repeat	282227	282295	138	+	.	.
scaffold386	subtractBed	intrn	283956	283997	.	-	.	Parent=CGI_10012692;
	scaffold386	TRF	Tandem_Repeat	283956	283997	84	+	.	.
scaffold386	subtractBed	intrn	326958	327082	.	-	.	Parent=CGI_10012698;
	scaffold386	TRF	Tandem_Repeat	326958	327082	94	+	.	.
scaffold386	subtractBed	intrn	326971	327098	.	-	.	Parent=CGI_10012698;
	scaffold386	TRF	Tandem_Repeat	326971	327098	73	+	.	.
scaffold386	subtractBed	intrn	326949	327105	.	-	.	Parent=CGI_10012698;
	scaffold386	TRF	Tandem_Repeat	326949	327105	280	+	.	.
scaffold386	subtractBed	intrn	330018	330977	.	-	.	Parent=CGI_10012698;
	scaffold386	TRF	Tandem_Repeat	330018	330977	1394	+	.	.
scaffold386	subtractBed	intrn	331008	331047	.	-	.	Parent=CGI_10012698;
	scaffold386	TRF	Tandem_Repeat	331008	331047	64	+	.	.
scaffold38626	subtractBed	intrn	27592	27912	.	-	.	Parent=CGI_10002868;
	scaffold38626	WUBlastX	LINE_CR1	27592	27912	145	-	.	.
scaffold38626	subtractBed	intrn	27062	27424	.	-	.	Parent=CGI_10002868;
	scaffold38626	WUBlastX	LINE_CR1	27062	27424	46	-	.	.
scaffold38626	subtractBed	intrn	27421	27912	.	-	.	Parent=CGI_10002868;
	scaffold38626	WUBlastX	LINE_CR1	27421	27912	143	-	.	.
scaffold38626	subtractBed	intrn	27131	27427	.	-	.	Parent=CGI_10002868;
	scaffold38626	WUBlastX	LINE_CR1	27131	27427	156	-	.	.
scaffold38626	subtractBed	intrn	27902	27976	.	-	.	Parent=CGI_10002868;
	scaffold38626	WUBlastX	LINE_CR1	27902	27976	27	-	.	.
scaffold38650	subtractBed	intrn	5924	6055	.	+	.	Parent=CGI_10002927;
	scaffold38650	TRF	Tandem_Repeat	5924	6055	114	+	.	.
scaffold38650	subtractBed	intrn	7585	7613	.	+	.	Parent=CGI_10002927;
	scaffold38650	TRF	Tandem_Repeat	7585	7613	58	+	.	.
scaffold38654	subtractBed	intrn	13848	13928	.	+	.	Parent=CGI_10002902;
	scaffold38654	TRF	Tandem_Repeat	13848	13928	99	+	.	.
scaffold38654	subtractBed	intrn	13848	13918	.	+	.	Parent=CGI_10002902;
	scaffold38654	TRF	Tandem_Repeat	13848	13918	81	+	.	.
scaffold38654	subtractBed	intrn	22490	22549	.	+	.	Parent=CGI_10002902;
	scaffold38654	TRF	Tandem_Repeat	22490	22549	120	+	.	.
scaffold38672	subtractBed	intrn	7809	9515	.	+	.	Parent=CGI_10002887;
	scaffold38672	WUBlastX	LINE_L1-Tx1	7809	9515	986	-	.	.
scaffold38672	subtractBed	intrn	15863	15918	.	+	.	Parent=CGI_10002887;
	scaffold38672	TRF	Tandem_Repeat	15863	15918	112	+	.	.
scaffold38674	subtractBed	intrn	11725	12295	.	-	.	Parent=CGI_10002899;
	scaffold38674	TRF	Tandem_Repeat	11725	12301	637	+	.	.
scaffold38674	subtractBed	intrn	11725	12295	.	-	.	Parent=CGI_10002899;
	scaffold38674	TRF	Tandem_Repeat	11725	12301	707	+	.	.
scaffold38674	subtractBed	intrn	12830	13029	.	-	.	Parent=CGI_10002899;
	scaffold38674	TRF	Tandem_Repeat	12830	13029	278	+	.	.
scaffold38674	subtractBed	intrn	21143	21191	.	+	.	Parent=CGI_10002900;
	scaffold38674	TRF	Tandem_Repeat	21143	21191	57	+	.	.
scaffold38674	subtractBed	intrn	21147	21196	.	+	.	Parent=CGI_10002900;
	scaffold38674	TRF	Tandem_Repeat	21147	21196	54	+	.	.
scaffold38674	subtractBed	intrn	34897	34926	.	+	.	Parent=CGI_10002901;
	scaffold38674	TRF	Tandem_Repeat	34897	34926	60	+	.	.
scaffold387	subtractBed	intrn	29058	29156	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	29058	29156	27	-	.	.
scaffold387	subtractBed	intrn	28933	29073	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	28933	29073	106	-	.	.
scaffold387	subtractBed	intrn	35475	35501	.	+	.	Parent=CGI_10004497;
	scaffold387	TRF	Tandem_Repeat	35475	35501	54	+	.	.
scaffold387	subtractBed	intrn	35180	35461	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	35180	35461	50	-	.	.
scaffold387	subtractBed	intrn	33688	34419	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	33688	34419	295	-	.	.
scaffold387	subtractBed	intrn	33508	34287	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	33508	34287	477	-	.	.
scaffold387	subtractBed	intrn	35171	35359	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	35171	35359	156	-	.	.
scaffold387	subtractBed	intrn	35135	35368	.	+	.	Parent=CGI_10004497;
	scaffold387	WUBlastX	LTR_Gypsy	35135	35368	55	-	.	.
scaffold387	subtractBed	intrn	37080	37107	.	+	.	Parent=CGI_10004497;
	scaffold387	TRF	Tandem_Repeat	37080	37107	56	+	.	.
scaffold387	subtractBed	intrn	37799	37828	.	+	.	Parent=CGI_10004497;
	scaffold387	TRF	Tandem_Repeat	37799	37828	60	+	.	.
scaffold387	subtractBed	intrn	39266	39319	.	+	.	Parent=CGI_10004497;
	scaffold387	TRF	Tandem_Repeat	39266	39319	72	+	.	.
scaffold387	subtractBed	intrn	67668	68344	.	-	.	Parent=CGI_10004500;
	scaffold387	TRF	Tandem_Repeat	67668	68344	789	+	.	.
scaffold38704	subtractBed	intrn	39791	39970	.	+	.	Parent=CGI_10002940;
	scaffold38704	TRF	Tandem_Repeat	39791	39970	143	+	.	.
scaffold38704	subtractBed	intrn	39815	40112	.	+	.	Parent=CGI_10002940;
	scaffold38704	TRF	Tandem_Repeat	39815	40112	297	+	.	.
scaffold38714	subtractBed	intrn	34703	34863	.	-	.	Parent=CGI_10002941;
	scaffold38714	TRF	Tandem_Repeat	34703	34863	65	+	.	.
scaffold38714	subtractBed	intrn	34803	34890	.	-	.	Parent=CGI_10002941;
	scaffold38714	TRF	Tandem_Repeat	34803	34890	77	+	.	.
scaffold38714	subtractBed	intrn	36617	37377	.	-	.	Parent=CGI_10002941;
	scaffold38714	TRF	Tandem_Repeat	36617	37377	811	+	.	.
scaffold38736	subtractBed	intrn	50365	50367	.	+	.	Parent=CGI_10002944;
	scaffold38736	WUBlastX	DNA_Harbinger	50224	50367	65	+	.	.
scaffold38736	subtractBed	intrn	50560	50562	.	+	.	Parent=CGI_10002944;
	scaffold38736	WUBlastX	DNA_Harbinger	50560	50829	81	+	.	.
scaffold38736	subtractBed	intrn	50560	50562	.	+	.	Parent=CGI_10002944;
	scaffold38736	WUBlastX	DNA_Harbinger	50560	50781	103	+	.	.
scaffold38750	subtractBed	intrn	5763	6011	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	5763	6011	87	-	.	.
scaffold38750	subtractBed	intrn	4462	4677	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	4462	4677	82	+	.	.
scaffold38750	subtractBed	intrn	3734	3955	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	3734	3955	53	+	.	.
scaffold38750	subtractBed	intrn	4459	4758	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	4459	4758	62	+	.	.
scaffold38750	subtractBed	intrn	3957	4256	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	3957	4256	73	+	.	.
scaffold38750	subtractBed	intrn	3948	4133	.	+	.	Parent=CGI_10002953;
	scaffold38750	WUBlastX	LINE_RTE-X	3948	4133	80	+	.	.
scaffold38750	subtractBed	intrn	16879	17373	.	+	.	Parent=CGI_10002957;
	scaffold38750	WUBlastX	LINE_RTE-X	16879	17373	21	+	.	.
scaffold38750	subtractBed	intrn	17041	17307	.	+	.	Parent=CGI_10002957;
	scaffold38750	WUBlastX	LINE_RTE-X	17041	17307	106	+	.	.
scaffold38752	subtractBed	intrn	3622	4712	.	-	.	Parent=CGI_10002945;
	scaffold38752	TRF	Tandem_Repeat	3622	4712	1666	+	.	.
scaffold38752	subtractBed	intrn	4918	4955	.	-	.	Parent=CGI_10002945;
	scaffold38752	TRF	Tandem_Repeat	4918	4955	58	+	.	.
scaffold38752	subtractBed	intrn	9001	9288	.	-	.	Parent=CGI_10002945;
	scaffold38752	WUBlastX	LINE_RTE-X	9001	9288	69	-	.	.
scaffold38752	subtractBed	intrn	8992	9168	.	-	.	Parent=CGI_10002945;
	scaffold38752	WUBlastX	LINE_RTE-X	8992	9168	86	-	.	.
scaffold38752	subtractBed	intrn	9001	9288	.	+	.	Parent=CGI_10002946;
	scaffold38752	WUBlastX	LINE_RTE-X	9001	9288	69	-	.	.
scaffold38752	subtractBed	intrn	8992	9168	.	+	.	Parent=CGI_10002946;
	scaffold38752	WUBlastX	LINE_RTE-X	8992	9168	86	-	.	.
scaffold38752	subtractBed	intrn	26790	26837	.	+	.	Parent=CGI_10002947;
	scaffold38752	TRF	Tandem_Repeat	26790	26837	96	+	.	.
scaffold38752	subtractBed	intrn	41763	41813	.	-	.	Parent=CGI_10002949;
	scaffold38752	TRF	Tandem_Repeat	41763	41813	102	+	.	.
scaffold38752	subtractBed	intrn	48426	48467	.	-	.	Parent=CGI_10002949;
	scaffold38752	TRF	Tandem_Repeat	48426	48467	75	+	.	.
scaffold38774	subtractBed	intrn	31045	31099	.	-	.	Parent=CGI_10002974;
	scaffold38774	TRF	Tandem_Repeat	31045	31099	55	+	.	.
scaffold38774	subtractBed	intrn	31107	31908	.	-	.	Parent=CGI_10002974;
	scaffold38774	TRF	Tandem_Repeat	31107	31908	1143	+	.	.
scaffold38780	subtractBed	intrn	2838	3248	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	DNA_Merlin	2838	3248	101	+	.	.
scaffold38780	subtractBed	intrn	6745	7221	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	DNA_PiggyBac	6745	7221	63	-	.	.
scaffold38780	subtractBed	intrn	13364	13633	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	LTR_Gypsy	13364	13633	27	+	.	.
scaffold38780	subtractBed	intrn	6648	6794	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	DNA_PiggyBac	6648	6794	70	-	.	.
scaffold38780	subtractBed	intrn	6612	6794	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	DNA_PiggyBac	6612	6794	63	-	.	.
scaffold38780	subtractBed	intrn	13376	13555	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	LTR_Gypsy	13376	13555	34	+	.	.
scaffold38780	subtractBed	intrn	12162	12605	.	-	.	Parent=CGI_10002959;
	scaffold38780	WUBlastX	LTR_Gypsy	12162	12605	81	+	.	.
scaffold38780	subtractBed	intrn	15871	15896	.	-	.	Parent=CGI_10002959;
	scaffold38780	TRF	Tandem_Repeat	15871	15896	52	+	.	.
scaffold38784	subtractBed	intrn	40688	40820	.	+	.	Parent=CGI_10002994;
	scaffold38784	TRF	Tandem_Repeat	40688	40820	162	+	.	.
scaffold38784	subtractBed	intrn	40964	40992	.	+	.	Parent=CGI_10002994;
	scaffold38784	TRF	Tandem_Repeat	40964	40992	58	+	.	.
scaffold38784	subtractBed	intrn	41186	41273	.	+	.	Parent=CGI_10002994;
	scaffold38784	TRF	Tandem_Repeat	41186	41273	126	+	.	.
scaffold38784	subtractBed	intrn	41313	41626	.	+	.	Parent=CGI_10002994;
	scaffold38784	TRF	Tandem_Repeat	41313	41626	373	+	.	.
scaffold38784	subtractBed	intrn	42999	43343	.	+	.	Parent=CGI_10002994;
	scaffold38784	WUBlastX	DNA_Academ	42999	43343	167	-	.	.
scaffold388	subtractBed	intrn	11996	12047	.	-	.	Parent=CGI_10020447;
	scaffold388	TRF	Tandem_Repeat	11996	12047	72	+	.	.
scaffold388	subtractBed	intrn	14744	14774	.	-	.	Parent=CGI_10020447;
	scaffold388	TRF	Tandem_Repeat	14744	14774	53	+	.	.
scaffold388	subtractBed	intrn	73182	73945	.	+	.	Parent=CGI_10020454;
	scaffold388	TRF	Tandem_Repeat	73178	73945	568	+	.	.
scaffold388	subtractBed	intrn	99379	99852	.	-	.	Parent=CGI_10020455;
	scaffold388	TRF	Tandem_Repeat	99379	99852	588	+	.	.
scaffold388	subtractBed	intrn	99414	99847	.	-	.	Parent=CGI_10020455;
	scaffold388	TRF	Tandem_Repeat	99414	99847	155	+	.	.
scaffold388	subtractBed	intrn	99401	99734	.	-	.	Parent=CGI_10020455;
	scaffold388	TRF	Tandem_Repeat	99401	99734	160	+	.	.
scaffold388	subtractBed	intrn	102266	102931	.	-	.	Parent=CGI_10020455;
	scaffold388	TRF	Tandem_Repeat	102266	102931	933	+	.	.
scaffold388	subtractBed	intrn	113921	114720	.	+	.	Parent=CGI_10020457;
	scaffold388	TRF	Tandem_Repeat	113921	114720	1505	+	.	.
scaffold388	subtractBed	intrn	128940	128992	.	+	.	Parent=CGI_10020460;
	scaffold388	TRF	Tandem_Repeat	128940	128992	72	+	.	.
scaffold388	subtractBed	intrn	187906	188435	.	-	.	Parent=CGI_10020463;
	scaffold388	TRF	Tandem_Repeat	187906	188435	627	+	.	.
scaffold388	subtractBed	intrn	187906	188391	.	-	.	Parent=CGI_10020463;
	scaffold388	TRF	Tandem_Repeat	187906	188391	836	+	.	.
scaffold388	subtractBed	intrn	187906	188391	.	-	.	Parent=CGI_10020463;
	scaffold388	TRF	Tandem_Repeat	187906	188391	836	+	.	.
scaffold388	subtractBed	intrn	192747	192806	.	-	.	Parent=CGI_10020463;
	scaffold388	TRF	Tandem_Repeat	192747	192806	95	+	.	.
scaffold388	subtractBed	intrn	205580	205651	.	-	.	Parent=CGI_10020464;
	scaffold388	TRF	Tandem_Repeat	205580	205651	137	+	.	.
scaffold388	subtractBed	intrn	212018	212078	.	+	.	Parent=CGI_10020465;
	scaffold388	TRF	Tandem_Repeat	212018	212078	52	+	.	.
scaffold388	subtractBed	intrn	215537	215584	.	+	.	Parent=CGI_10020465;
	scaffold388	TRF	Tandem_Repeat	215537	215584	51	+	.	.
scaffold388	subtractBed	intrn	220523	220732	.	+	.	Parent=CGI_10020465;
	scaffold388	WUBlastX	LINE_RTE-X	220523	220732	34	-	.	.
scaffold388	subtractBed	intrn	220613	220750	.	+	.	Parent=CGI_10020465;
	scaffold388	WUBlastX	LINE_RTE-X	220613	220750	53	-	.	.
scaffold388	subtractBed	intrn	220619	220732	.	+	.	Parent=CGI_10020465;
	scaffold388	WUBlastX	LINE_RTE-X	220619	220732	55	-	.	.
scaffold388	subtractBed	intrn	221778	221834	.	+	.	Parent=CGI_10020465;
	scaffold388	TRF	Tandem_Repeat	221778	221834	114	+	.	.
scaffold388	subtractBed	intrn	220523	220732	.	-	.	Parent=CGI_10020466;
	scaffold388	WUBlastX	LINE_RTE-X	220523	220732	34	-	.	.
scaffold388	subtractBed	intrn	220613	220750	.	-	.	Parent=CGI_10020466;
	scaffold388	WUBlastX	LINE_RTE-X	220613	220750	53	-	.	.
scaffold388	subtractBed	intrn	220619	220732	.	-	.	Parent=CGI_10020466;
	scaffold388	WUBlastX	LINE_RTE-X	220619	220732	55	-	.	.
scaffold388	subtractBed	intrn	269209	269250	.	+	.	Parent=CGI_10020472;
	scaffold388	TRF	Tandem_Repeat	269209	269250	50	+	.	.
scaffold388	subtractBed	intrn	279080	279139	.	+	.	Parent=CGI_10020472;
	scaffold388	WUBlastX	DNA_Academ	279080	279139	28	+	.	.
scaffold388	subtractBed	intrn	279080	279139	.	-	.	Parent=CGI_10020473;
	scaffold388	WUBlastX	DNA_Academ	279080	279139	28	+	.	.
scaffold388	subtractBed	intrn	291157	291192	.	-	.	Parent=CGI_10020473;
	scaffold388	TRF	Tandem_Repeat	291157	291192	72	+	.	.
scaffold388	subtractBed	intrn	323219	323262	.	-	.	Parent=CGI_10020473;
	scaffold388	TRF	Tandem_Repeat	323219	323262	52	+	.	.
scaffold388	subtractBed	intrn	339001	339070	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	339001	339070	140	+	.	.
scaffold388	subtractBed	intrn	339068	339100	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	339068	339100	57	+	.	.
scaffold388	subtractBed	intrn	347731	347764	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	347731	347764	52	+	.	.
scaffold388	subtractBed	intrn	377646	378543	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	377646	378543	818	+	.	.
scaffold388	subtractBed	intrn	378712	378754	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	378712	378754	59	+	.	.
scaffold388	subtractBed	intrn	376090	377026	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	376090	377026	977	+	.	.
scaffold388	subtractBed	intrn	389508	389532	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	389508	389532	50	+	.	.
scaffold388	subtractBed	intrn	401201	401251	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	401201	401251	50	+	.	.
scaffold388	subtractBed	intrn	401198	401253	.	-	.	Parent=CGI_10020474;
	scaffold388	TRF	Tandem_Repeat	401198	401253	76	+	.	.
scaffold388	subtractBed	intrn	564112	564175	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	564112	564175	83	+	.	.
scaffold388	subtractBed	intrn	564094	564194	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	564094	564194	73	+	.	.
scaffold388	subtractBed	intrn	564265	564294	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	564265	564294	51	+	.	.
scaffold388	subtractBed	intrn	564314	564343	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	564314	564343	53	+	.	.
scaffold388	subtractBed	intrn	566358	566431	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	566358	566431	139	+	.	.
scaffold388	subtractBed	intrn	568157	568423	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	568157	568423	182	+	.	.
scaffold388	subtractBed	intrn	568296	568553	.	+	.	Parent=CGI_10020479;
	scaffold388	TRF	Tandem_Repeat	568296	568553	135	+	.	.
scaffold38804	subtractBed	intrn	26216	26307	.	-	.	Parent=CGI_10002976;
	scaffold38804	TRF	Tandem_Repeat	26216	26307	91	+	.	.
scaffold38804	subtractBed	intrn	27274	27299	.	-	.	Parent=CGI_10002976;
	scaffold38804	TRF	Tandem_Repeat	27274	27299	52	+	.	.
scaffold38804	subtractBed	intrn	32015	32281	.	-	.	Parent=CGI_10002976;
	scaffold38804	WUBlastX	LINE_CR1-L2	32015	32281	51	-	.	.
scaffold38804	subtractBed	intrn	32441	32500	.	-	.	Parent=CGI_10002976;
	scaffold38804	WUBlastX	LINE_CR1	32441	32500	25	-	.	.
scaffold38822	subtractBed	intrn	1502	1583	.	-	.	Parent=CGI_10003013;
	scaffold38822	TRF	Tandem_Repeat	1502	1583	137	+	.	.
scaffold38822	subtractBed	intrn	3502	3539	.	-	.	Parent=CGI_10003013;
	scaffold38822	TRF	Tandem_Repeat	3502	3539	76	+	.	.
scaffold38822	subtractBed	intrn	7291	7370	.	-	.	Parent=CGI_10003013;
	scaffold38822	TRF	Tandem_Repeat	7291	7370	128	+	.	.
scaffold38822	subtractBed	intrn	8374	8712	.	-	.	Parent=CGI_10003013;
	scaffold38822	WUBlastX	LTR_Ngaro	8374	8712	85	+	.	.
scaffold38822	subtractBed	intrn	8362	8772	.	-	.	Parent=CGI_10003013;
	scaffold38822	WUBlastX	LTR_Ngaro	8362	8772	76	+	.	.
scaffold38824	subtractBed	intrn	40945	40988	.	+	.	Parent=CGI_10003008;
	scaffold38824	TRF	Tandem_Repeat	40945	40988	52	+	.	.
scaffold38824	subtractBed	intrn	42555	42590	.	+	.	Parent=CGI_10003008;
	scaffold38824	TRF	Tandem_Repeat	42555	42590	72	+	.	.
scaffold38828	subtractBed	intrn	18955	19174	.	-	.	Parent=CGI_10002999;
	scaffold38828	TRF	Tandem_Repeat	18955	19174	361	+	.	.
scaffold38828	subtractBed	intrn	19666	19773	.	-	.	Parent=CGI_10002999;
	scaffold38828	TRF	Tandem_Repeat	19666	19773	162	+	.	.
scaffold38828	subtractBed	intrn	60947	60997	.	-	.	Parent=CGI_10003001;
	scaffold38828	TRF	Tandem_Repeat	60947	60997	52	+	.	.
scaffold38828	subtractBed	intrn	60963	60992	.	-	.	Parent=CGI_10003001;
	scaffold38828	TRF	Tandem_Repeat	60963	60992	51	+	.	.
scaffold38854	subtractBed	intrn	11216	11259	.	-	.	Parent=CGI_10003010;
	scaffold38854	TRF	Tandem_Repeat	11216	11259	88	+	.	.
scaffold38854	subtractBed	intrn	17582	17728	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	LINE_L2	17582	17728	20	+	.	.
scaffold38854	subtractBed	intrn	19353	19715	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	DNA_Harbinger	19353	19715	102	+	.	.
scaffold38854	subtractBed	intrn	18573	18755	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	LINE_L1-Tx1	18573	18755	61	+	.	.
scaffold38854	subtractBed	intrn	18758	18883	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	LINE_L1-Tx1	18758	18883	29	+	.	.
scaffold38854	subtractBed	intrn	18115	18603	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	LINE_L1-Tx1	18115	18603	237	+	.	.
scaffold38854	subtractBed	intrn	18767	18844	.	+	.	Parent=CGI_10003011;
	scaffold38854	WUBlastX	LINE_L1-Tx1	18767	18844	33	+	.	.
scaffold38854	subtractBed	intrn	31550	31927	.	-	.	Parent=CGI_10003012;
	scaffold38854	WUBlastX	LTR_Gypsy	31550	31927	132	+	.	.
scaffold38854	subtractBed	intrn	31547	31867	.	-	.	Parent=CGI_10003012;
	scaffold38854	WUBlastX	LTR_Gypsy	31547	31867	151	+	.	.
scaffold38876	subtractBed	intrn	31253	31381	.	+	.	Parent=CGI_10003027;
	scaffold38876	WUBlastX	LTR_Gypsy	31253	31381	25	+	.	.
scaffold38884	subtractBed	intrn	45866	46405	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	45866	46405	241	+	.	.
scaffold38884	subtractBed	intrn	46854	47921	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	46854	47921	688	+	.	.
scaffold38884	subtractBed	intrn	47899	48540	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	47899	48540	359	+	.	.
scaffold38884	subtractBed	intrn	45866	46876	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	45866	46876	220	+	.	.
scaffold38884	subtractBed	intrn	49300	49533	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	DNA?_Crypton?	49300	49533	57	+	.	.
scaffold38884	subtractBed	intrn	49339	49539	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	49339	49539	149	+	.	.
scaffold38884	subtractBed	intrn	48548	49297	.	-	.	Parent=CGI_10003004;
	scaffold38884	WUBlastX	LTR_DIRS	48548	49297	538	+	.	.
scaffold389	subtractBed	intrn	86193	86249	.	-	.	Parent=CGI_10005521;
	scaffold389	TRF	Tandem_Repeat	86193	86249	114	+	.	.
scaffold389	subtractBed	intrn	86275	86300	.	-	.	Parent=CGI_10005521;
	scaffold389	TRF	Tandem_Repeat	86275	86300	52	+	.	.
scaffold389	subtractBed	intrn	102692	102980	.	-	.	Parent=CGI_10005522;
	scaffold389	TRF	Tandem_Repeat	102692	102980	533	+	.	.
scaffold389	subtractBed	intrn	123697	123746	.	-	.	Parent=CGI_10005523;
	scaffold389	TRF	Tandem_Repeat	123697	123746	100	+	.	.
scaffold38900	subtractBed	intrn	18349	18360	.	-	.	Parent=CGI_10003039;
	scaffold38900	WUBlastX	DNA_Harbinger	18349	18528	55	-	.	.
scaffold38900	subtractBed	intrn	18527	18528	.	-	.	Parent=CGI_10003039;
	scaffold38900	WUBlastX	DNA_Harbinger	18349	18528	55	-	.	.
scaffold38900	subtractBed	intrn	48942	48953	.	-	.	Parent=CGI_10003041;
	scaffold38900	WUBlastX	DNA_Harbinger	48942	49109	36	-	.	.
scaffold38900	subtractBed	intrn	49093	49109	.	-	.	Parent=CGI_10003041;
	scaffold38900	WUBlastX	DNA_Harbinger	48942	49109	36	-	.	.
scaffold38900	subtractBed	intrn	49284	49338	.	-	.	Parent=CGI_10003041;
	scaffold38900	TRF	Tandem_Repeat	49284	49338	110	+	.	.
scaffold38900	subtractBed	intrn	60430	60467	.	-	.	Parent=CGI_10003043;
	scaffold38900	TRF	Tandem_Repeat	60430	60467	76	+	.	.
scaffold38904	subtractBed	intrn	22374	23183	.	-	.	Parent=CGI_10003048;
	scaffold38904	WUBlastX	LTR_Ngaro	22374	23183	148	+	.	.
scaffold38904	subtractBed	intrn	22264	22503	.	-	.	Parent=CGI_10003048;
	scaffold38904	WUBlastX	LTR_Ngaro	22264	22503	32	+	.	.
scaffold38904	subtractBed	intrn	22506	23189	.	-	.	Parent=CGI_10003048;
	scaffold38904	WUBlastX	LTR_Ngaro	22506	23189	216	+	.	.
scaffold38912	subtractBed	intrn	6085	6420	.	+	.	Parent=CGI_10003031;
	scaffold38912	WUBlastX	LINE_L2	6085	6420	85	-	.	.
scaffold38920	subtractBed	intrn	15118	15163	.	+	.	Parent=CGI_10003065;
	scaffold38920	TRF	Tandem_Repeat	15118	15163	65	+	.	.
scaffold38920	subtractBed	intrn	15598	15781	.	+	.	Parent=CGI_10003065;
	scaffold38920	TRF	Tandem_Repeat	15598	15781	217	+	.	.
scaffold38920	subtractBed	intrn	28889	28914	.	+	.	Parent=CGI_10003065;
	scaffold38920	TRF	Tandem_Repeat	28889	28914	52	+	.	.
scaffold38920	subtractBed	intrn	54500	54529	.	+	.	Parent=CGI_10003066;
	scaffold38920	TRF	Tandem_Repeat	54500	54529	60	+	.	.
scaffold38934	subtractBed	intrn	20984	21286	.	+	.	Parent=CGI_10003096;
	scaffold38934	WUBlastX	LTR_Ngaro	20984	21286	165	-	.	.
scaffold38934	subtractBed	intrn	20660	21313	.	+	.	Parent=CGI_10003096;
	scaffold38934	WUBlastX	LTR_Ngaro	20660	21313	93	-	.	.
scaffold38934	subtractBed	intrn	20073	20228	.	+	.	Parent=CGI_10003096;
	scaffold38934	WUBlastX	LTR_Ngaro	20073	20228	43	-	.	.
scaffold38934	subtractBed	intrn	20849	21286	.	+	.	Parent=CGI_10003096;
	scaffold38934	WUBlastX	LTR_Ngaro	20849	21286	108	-	.	.
scaffold38934	subtractBed	intrn	20043	20228	.	+	.	Parent=CGI_10003096;
	scaffold38934	WUBlastX	LTR_Ngaro	20043	20228	39	-	.	.
scaffold38934	subtractBed	intrn	29783	29816	.	+	.	Parent=CGI_10003097;
	scaffold38934	TRF	Tandem_Repeat	29783	29816	68	+	.	.
scaffold38934	subtractBed	intrn	45976	46143	.	+	.	Parent=CGI_10003097;
	scaffold38934	WUBlastX	DNA_Kolobok	45976	46143	86	+	.	.
scaffold38934	subtractBed	intrn	44941	45171	.	+	.	Parent=CGI_10003097;
	scaffold38934	WUBlastX	DNA_Kolobok	44941	45171	38	+	.	.
scaffold38934	subtractBed	intrn	46366	47082	.	+	.	Parent=CGI_10003097;
	scaffold38934	WUBlastX	DNA_Kolobok	46366	47082	411	-	.	.
scaffold38944	subtractBed	intrn	15994	16292	.	-	.	Parent=CGI_10003069;
	scaffold38944	TRF	Tandem_Repeat	15994	16320	546	+	.	.
scaffold38944	subtractBed	intrn	22826	23258	.	+	.	Parent=CGI_10003070;
	scaffold38944	WUBlastX	LTR_Gypsy	22826	23467	57	+	.	.
scaffold38944	subtractBed	intrn	22574	22614	.	+	.	Parent=CGI_10003070;
	scaffold38944	WUBlastX	LTR_Gypsy	21742	22614	45	+	.	.
scaffold38944	subtractBed	intrn	34458	34513	.	+	.	Parent=CGI_10003072;
	scaffold38944	TRF	Tandem_Repeat	34458	34513	76	+	.	.
scaffold38944	subtractBed	intrn	34544	35670	.	+	.	Parent=CGI_10003072;
	scaffold38944	TRF	Tandem_Repeat	34544	35670	1595	+	.	.
scaffold38944	subtractBed	intrn	42817	42860	.	+	.	Parent=CGI_10003073;
	scaffold38944	TRF	Tandem_Repeat	42817	42860	88	+	.	.
scaffold38966	subtractBed	intrn	29931	30064	.	+	.	Parent=CGI_10003112;
	scaffold38966	TRF	Tandem_Repeat	29931	30064	110	+	.	.
scaffold38966	subtractBed	intrn	49607	49648	.	+	.	Parent=CGI_10003113;
	scaffold38966	TRF	Tandem_Repeat	49607	49648	57	+	.	.
scaffold38966	subtractBed	intrn	52595	53455	.	+	.	Parent=CGI_10003113;
	scaffold38966	WUBlastX	DNA_TcMar-Tc1	52595	53455	205	+	.	.
scaffold38966	subtractBed	intrn	52435	52818	.	+	.	Parent=CGI_10003113;
	scaffold38966	WUBlastX	DNA_TcMar-Tc1	52435	52818	105	+	.	.
scaffold38966	subtractBed	intrn	52817	53455	.	+	.	Parent=CGI_10003113;
	scaffold38966	WUBlastX	DNA_TcMar-Tc1	52817	53455	305	+	.	.
scaffold38974	subtractBed	intrn	20566	20655	.	+	.	Parent=CGI_10003119;
	scaffold38974	WUBlastX	DNA_Kolobok	20566	20655	61	-	.	.
scaffold38974	subtractBed	intrn	20717	20884	.	+	.	Parent=CGI_10003119;
	scaffold38974	WUBlastX	DNA_Kolobok	20717	20884	53	-	.	.
scaffold38974	subtractBed	intrn	18770	18863	.	+	.	Parent=CGI_10003119;
	scaffold38974	WUBlastX	DNA_Kolobok	18765	18863	58	+	.	.
scaffold38974	subtractBed	intrn	19548	19787	.	+	.	Parent=CGI_10003119;
	scaffold38974	WUBlastX	DNA_Kolobok	19548	19787	103	-	.	.
scaffold38974	subtractBed	intrn	21300	21515	.	+	.	Parent=CGI_10003119;
	scaffold38974	WUBlastX	DNA_Kolobok	21300	21515	107	-	.	.
scaffold38976	subtractBed	intrn	7764	8096	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	LTR_Gypsy	7764	8096	39	-	.	.
scaffold38976	subtractBed	intrn	10731	10946	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	DNA_TcMar-Marin	10731	10946	84	-	.	.
scaffold38976	subtractBed	intrn	11098	11280	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	DNA_TcMar-Marin	11098	11280	120	-	.	.
scaffold38976	subtractBed	intrn	11282	11776	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	DNA_TcMar-Marin	11282	11776	167	-	.	.
scaffold38976	subtractBed	intrn	7875	9392	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	LTR_Gypsy	7875	9392	1423	-	.	.
scaffold38976	subtractBed	intrn	9349	9915	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	LTR_Gypsy	9349	9915	257	-	.	.
scaffold38976	subtractBed	intrn	9927	10343	.	+	.	Parent=CGI_10003109;
	scaffold38976	WUBlastX	LTR_Gypsy	9927	10343	348	-	.	.
scaffold38978	subtractBed	intrn	2983	3255	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_TcMar-Tc1	2983	3255	63	+	.	.
scaffold38978	subtractBed	intrn	3096	3659	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_TcMar-Tc1	3096	3659	128	+	.	.
scaffold38978	subtractBed	intrn	3195	3659	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_TcMar-Tc1	3195	3659	179	+	.	.
scaffold38978	subtractBed	intrn	5267	5317	.	+	.	Parent=CGI_10003126;
	scaffold38978	TRF	Tandem_Repeat	5267	5317	102	+	.	.
scaffold38978	subtractBed	intrn	6346	6428	.	+	.	Parent=CGI_10003126;
	scaffold38978	TRF	Tandem_Repeat	6346	6428	76	+	.	.
scaffold38978	subtractBed	intrn	6346	6427	.	+	.	Parent=CGI_10003126;
	scaffold38978	TRF	Tandem_Repeat	6346	6427	69	+	.	.
scaffold38978	subtractBed	intrn	6349	6428	.	+	.	Parent=CGI_10003126;
	scaffold38978	TRF	Tandem_Repeat	6349	6428	88	+	.	.
scaffold38978	subtractBed	intrn	7527	7538	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	7527	7757	72	-	.	.
scaffold38978	subtractBed	intrn	7756	7757	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	7527	7757	72	-	.	.
scaffold38978	subtractBed	intrn	7880	8131	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	7880	8131	231	-	.	.
scaffold38978	subtractBed	intrn	8435	8435	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	8435	8779	164	-	.	.
scaffold38978	subtractBed	intrn	8522	8863	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	8441	8863	77	-	.	.
scaffold38978	subtractBed	intrn	9996	10214	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	9996	10214	39	-	.	.
scaffold38978	subtractBed	intrn	8522	8779	.	+	.	Parent=CGI_10003126;
	scaffold38978	WUBlastX	DNA_Harbinger	8435	8779	164	-	.	.
scaffold38978	subtractBed	intrn	7756	7757	.	-	.	Parent=CGI_10003127;
	scaffold38978	WUBlastX	DNA_Harbinger	7527	7757	72	-	.	.
scaffold38978	subtractBed	intrn	7880	8131	.	-	.	Parent=CGI_10003127;
	scaffold38978	WUBlastX	DNA_Harbinger	7880	8131	231	-	.	.
scaffold38978	subtractBed	intrn	8435	8435	.	-	.	Parent=CGI_10003127;
	scaffold38978	WUBlastX	DNA_Harbinger	8435	8779	164	-	.	.
scaffold38980	subtractBed	intrn	55987	56024	.	+	.	Parent=CGI_10003118;
	scaffold38980	TRF	Tandem_Repeat	55987	56024	51	+	.	.
scaffold38984	subtractBed	intrn	4270	4326	.	-	.	Parent=CGI_10003104;
	scaffold38984	TRF	Tandem_Repeat	4270	4326	105	+	.	.
scaffold38984	subtractBed	intrn	10953	10995	.	-	.	Parent=CGI_10003105;
	scaffold38984	TRF	Tandem_Repeat	10953	10995	59	+	.	.
scaffold38984	subtractBed	intrn	15666	15799	.	-	.	Parent=CGI_10003105;
	scaffold38984	WUBlastX	LINE_RTE-BovB	15666	16040	95	+	.	.
scaffold38984	subtractBed	intrn	23063	23092	.	-	.	Parent=CGI_10003107;
	scaffold38984	TRF	Tandem_Repeat	23063	23092	60	+	.	.
scaffold38984	subtractBed	intrn	34884	35132	.	-	.	Parent=CGI_10003107;
	scaffold38984	TRF	Tandem_Repeat	34884	35132	374	+	.	.
scaffold39014	subtractBed	intrn	61972	61972	.	+	.	Parent=CGI_10003136;
	scaffold39014	WUBlastX	DNA_Harbinger	61790	61972	24	+	.	.
scaffold39014	subtractBed	intrn	62650	62707	.	+	.	Parent=CGI_10003136;
	scaffold39014	WUBlastX	DNA_Harbinger	62650	62859	39	+	.	.
scaffold39028	subtractBed	intrn	43375	43427	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	43375	43427	106	+	.	.
scaffold39028	subtractBed	intrn	44451	44486	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	44451	44486	63	+	.	.
scaffold39028	subtractBed	intrn	44660	44714	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	44660	44714	110	+	.	.
scaffold39028	subtractBed	intrn	45605	45675	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	45605	45675	53	+	.	.
scaffold39028	subtractBed	intrn	45606	45691	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	45606	45691	77	+	.	.
scaffold39028	subtractBed	intrn	45605	45789	.	-	.	Parent=CGI_10003151;
	scaffold39028	TRF	Tandem_Repeat	45605	45789	64	+	.	.
scaffold39040	subtractBed	intrn	5031	5066	.	-	.	Parent=CGI_10003144;
	scaffold39040	TRF	Tandem_Repeat	5031	5066	72	+	.	.
scaffold39040	subtractBed	intrn	45600	45629	.	-	.	Parent=CGI_10003145;
	scaffold39040	TRF	Tandem_Repeat	45600	45629	51	+	.	.
scaffold39040	subtractBed	intrn	46484	46512	.	-	.	Parent=CGI_10003145;
	scaffold39040	TRF	Tandem_Repeat	46484	46512	58	+	.	.
scaffold39040	subtractBed	intrn	49458	49504	.	-	.	Parent=CGI_10003145;
	scaffold39040	TRF	Tandem_Repeat	49458	49504	94	+	.	.
scaffold39040	subtractBed	intrn	51124	51227	.	-	.	Parent=CGI_10003145;
	scaffold39040	TRF	Tandem_Repeat	51124	51227	181	+	.	.
scaffold39064	subtractBed	intrn	3437	3474	.	-	.	Parent=CGI_10003156;
	scaffold39064	TRF	Tandem_Repeat	3437	3474	58	+	.	.
scaffold39064	subtractBed	intrn	4531	4753	.	-	.	Parent=CGI_10003156;
	scaffold39064	TRF	Tandem_Repeat	4531	4753	222	+	.	.
scaffold39064	subtractBed	intrn	4842	5013	.	-	.	Parent=CGI_10003156;
	scaffold39064	TRF	Tandem_Repeat	4842	5013	217	+	.	.
scaffold39064	subtractBed	intrn	5232	5869	.	-	.	Parent=CGI_10003156;
	scaffold39064	TRF	Tandem_Repeat	5232	5869	961	+	.	.
scaffold39064	subtractBed	intrn	7258	7302	.	-	.	Parent=CGI_10003156;
	scaffold39064	TRF	Tandem_Repeat	7258	7302	81	+	.	.
scaffold39064	subtractBed	intrn	20327	20374	.	+	.	Parent=CGI_10003158;
	scaffold39064	TRF	Tandem_Repeat	20327	20374	87	+	.	.
scaffold39064	subtractBed	intrn	26722	26756	.	+	.	Parent=CGI_10003158;
	scaffold39064	TRF	Tandem_Repeat	26722	26756	70	+	.	.
scaffold39074	subtractBed	intrn	2420	2448	.	+	.	Parent=CGI_10003130;
	scaffold39074	TRF	Tandem_Repeat	2420	2448	58	+	.	.
scaffold39074	subtractBed	intrn	7897	8235	.	+	.	Parent=CGI_10003130;
	scaffold39074	TRF	Tandem_Repeat	7897	8235	475	+	.	.
scaffold39078	subtractBed	intrn	18002	18042	.	+	.	Parent=CGI_10003180;
	scaffold39078	TRF	Tandem_Repeat	18002	18042	82	+	.	.
scaffold39078	subtractBed	intrn	19469	19496	.	+	.	Parent=CGI_10003180;
	scaffold39078	TRF	Tandem_Repeat	19469	19496	56	+	.	.
scaffold39078	subtractBed	intrn	29530	29583	.	-	.	Parent=CGI_10003181;
	scaffold39078	TRF	Tandem_Repeat	29530	29583	92	+	.	.
scaffold39080	subtractBed	intrn	6658	7084	.	-	.	Parent=CGI_10003167;
	scaffold39080	TRF	Tandem_Repeat	6658	7084	297	+	.	.
scaffold39080	subtractBed	intrn	6746	7084	.	-	.	Parent=CGI_10003167;
	scaffold39080	TRF	Tandem_Repeat	6746	7084	250	+	.	.
scaffold39088	subtractBed	intrn	6336	6484	.	-	.	Parent=CGI_10003169;
	scaffold39088	TRF	Tandem_Repeat	6336	6484	97	+	.	.
scaffold39088	subtractBed	intrn	9530	10279	.	-	.	Parent=CGI_10003169;
	scaffold39088	TRF	Tandem_Repeat	9530	10279	975	+	.	.
scaffold39088	subtractBed	intrn	10417	10460	.	-	.	Parent=CGI_10003169;
	scaffold39088	TRF	Tandem_Repeat	10417	10460	72	+	.	.
scaffold39088	subtractBed	intrn	26170	26202	.	+	.	Parent=CGI_10003172;
	scaffold39088	TRF	Tandem_Repeat	26170	26202	57	+	.	.
scaffold39088	subtractBed	intrn	40571	40834	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	40571	40834	51	+	.	.
scaffold39088	subtractBed	intrn	41250	41582	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	41250	41582	57	+	.	.
scaffold39088	subtractBed	intrn	41238	41435	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	41238	41435	66	+	.	.
scaffold39088	subtractBed	intrn	40134	40247	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	40134	40247	20	+	.	.
scaffold39088	subtractBed	intrn	40571	40783	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	40571	40783	118	+	.	.
scaffold39088	subtractBed	intrn	41232	41369	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	41232	41369	92	+	.	.
scaffold39088	subtractBed	intrn	40219	40566	.	-	.	Parent=CGI_10003173;
	scaffold39088	WUBlastX	DNA_TcMar-Tc1	40219	40566	96	+	.	.
scaffold39096	subtractBed	intrn	22040	22513	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy-Cigr	22040	22513	114	+	.	.
scaffold39096	subtractBed	intrn	21905	22762	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy	21905	22762	64	+	.	.
scaffold39096	subtractBed	intrn	24261	26228	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy	24261	26228	1116	+	.	.
scaffold39096	subtractBed	intrn	22034	22738	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy-Cigr	22034	22738	108	+	.	.
scaffold39096	subtractBed	intrn	24618	26141	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy-Cigr	24618	26141	1326	+	.	.
scaffold39096	subtractBed	intrn	22912	23256	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy-Cigr	22912	23256	79	+	.	.
scaffold39096	subtractBed	intrn	22783	23196	.	+	.	Parent=CGI_10003146;
	scaffold39096	WUBlastX	LTR_Gypsy	22783	23196	74	+	.	.
scaffold39096	subtractBed	intrn	51762	52112	.	+	.	Parent=CGI_10003149;
	scaffold39096	WUBlastX	LTR_Gypsy	51762	52112	56	+	.	.
scaffold39096	subtractBed	intrn	50909	51616	.	+	.	Parent=CGI_10003149;
	scaffold39096	WUBlastX	LTR_Gypsy	50909	51616	128	+	.	.
scaffold39096	subtractBed	intrn	51687	52097	.	+	.	Parent=CGI_10003149;
	scaffold39096	WUBlastX	LTR_Gypsy	51687	52097	38	+	.	.
scaffold39096	subtractBed	intrn	50963	51553	.	+	.	Parent=CGI_10003149;
	scaffold39096	WUBlastX	LTR_Gypsy-Cigr	50963	51553	169	+	.	.
scaffold39120	subtractBed	intrn	46310	46471	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	LTR_Ngaro	46310	46471	41	-	.	.
scaffold39120	subtractBed	intrn	47978	48142	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	DNA_IS4EU	47978	48142	58	-	.	.
scaffold39120	subtractBed	intrn	46014	46286	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	LTR_Ngaro	46014	46286	81	-	.	.
scaffold39120	subtractBed	intrn	47978	48259	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	DNA_Kolobok-IS4	47978	48259	27	-	.	.
scaffold39120	subtractBed	intrn	45981	46208	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	LTR_Ngaro	45981	46208	102	-	.	.
scaffold39120	subtractBed	intrn	46147	46365	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	LTR_Ngaro	46147	46365	56	-	.	.
scaffold39120	subtractBed	intrn	46397	46558	.	+	.	Parent=CGI_10003188;
	scaffold39120	WUBlastX	LTR_Ngaro	46397	46558	33	-	.	.
scaffold39120	subtractBed	intrn	54291	54331	.	+	.	Parent=CGI_10003189;
	scaffold39120	TRF	Tandem_Repeat	54291	54331	82	+	.	.
scaffold39122	subtractBed	intrn	23553	23696	.	-	.	Parent=CGI_10003164;
	scaffold39122	TRF	Tandem_Repeat	23553	23696	69	+	.	.
scaffold39122	subtractBed	intrn	24699	25601	.	-	.	Parent=CGI_10003164;
	scaffold39122	TRF	Tandem_Repeat	24699	25601	1346	+	.	.
scaffold39122	subtractBed	intrn	25922	26084	.	-	.	Parent=CGI_10003164;
	scaffold39122	TRF	Tandem_Repeat	25922	26084	265	+	.	.
scaffold39122	subtractBed	intrn	30734	30772	.	-	.	Parent=CGI_10003164;
	scaffold39122	TRF	Tandem_Repeat	30734	30772	78	+	.	.
scaffold39122	subtractBed	intrn	30954	31016	.	-	.	Parent=CGI_10003164;
	scaffold39122	TRF	Tandem_Repeat	30954	31016	126	+	.	.
scaffold39126	subtractBed	intrn	16819	16846	.	+	.	Parent=CGI_10003195;
	scaffold39126	TRF	Tandem_Repeat	16819	16846	56	+	.	.
scaffold39126	subtractBed	intrn	23170	23215	.	+	.	Parent=CGI_10003195;
	scaffold39126	TRF	Tandem_Repeat	23170	23215	92	+	.	.
scaffold39134	subtractBed	intrn	11401	12290	.	-	.	Parent=CGI_10003182;
	scaffold39134	TRF	Tandem_Repeat	11401	12290	1192	+	.	.
scaffold39134	subtractBed	intrn	22270	23332	.	+	.	Parent=CGI_10003184;
	scaffold39134	TRF	Tandem_Repeat	22270	23332	1740	+	.	.
scaffold39134	subtractBed	intrn	22673	22746	.	+	.	Parent=CGI_10003184;
	scaffold39134	TRF	Tandem_Repeat	22673	22746	57	+	.	.
scaffold39134	subtractBed	intrn	22767	22837	.	+	.	Parent=CGI_10003184;
	scaffold39134	TRF	Tandem_Repeat	22767	22837	51	+	.	.
scaffold39134	subtractBed	intrn	26705	26769	.	+	.	Parent=CGI_10003184;
	scaffold39134	TRF	Tandem_Repeat	26705	26769	121	+	.	.
scaffold39134	subtractBed	intrn	27257	27300	.	+	.	Parent=CGI_10003184;
	scaffold39134	TRF	Tandem_Repeat	27257	27300	81	+	.	.
scaffold39134	subtractBed	intrn	39779	39843	.	-	.	Parent=CGI_10003186;
	scaffold39134	TRF	Tandem_Repeat	39779	39843	87	+	.	.
scaffold39134	subtractBed	intrn	41899	42348	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LINE_RTE-X	41899	42348	57	-	.	.
scaffold39134	subtractBed	intrn	42390	42575	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LINE_RTE-X	42390	42575	47	-	.	.
scaffold39134	subtractBed	intrn	42067	42399	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LINE_RTE-X	42067	42399	52	-	.	.
scaffold39134	subtractBed	intrn	42064	42348	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LINE_RTE-X	42064	42348	89	-	.	.
scaffold39134	subtractBed	intrn	48751	48876	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	48751	48876	28	+	.	.
scaffold39134	subtractBed	intrn	48763	48900	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	48763	48900	25	+	.	.
scaffold39134	subtractBed	intrn	45196	45354	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	45196	45354	69	+	.	.
scaffold39134	subtractBed	intrn	45350	45676	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	45350	45676	91	+	.	.
scaffold39134	subtractBed	intrn	45356	45631	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	45356	45631	168	+	.	.
scaffold39134	subtractBed	intrn	45976	46020	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	45976	46020	22	+	.	.
scaffold39134	subtractBed	intrn	50783	50838	.	-	.	Parent=CGI_10003186;
	scaffold39134	TRF	Tandem_Repeat	50783	50838	112	+	.	.
scaffold39134	subtractBed	intrn	49506	50201	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	49506	50201	191	+	.	.
scaffold39134	subtractBed	intrn	50197	50379	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	50197	50379	117	+	.	.
scaffold39134	subtractBed	intrn	50110	50523	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	50110	50523	83	+	.	.
scaffold39134	subtractBed	intrn	49420	49656	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	49420	49656	145	+	.	.
scaffold39134	subtractBed	intrn	49686	50204	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	49686	50204	319	+	.	.
scaffold39134	subtractBed	intrn	49013	49435	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	49013	49435	189	+	.	.
scaffold39134	subtractBed	intrn	48923	49456	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	LTR_Gypsy	48923	49456	178	+	.	.
scaffold39134	subtractBed	intrn	55333	56368	.	-	.	Parent=CGI_10003186;
	scaffold39134	TRF	Tandem_Repeat	55333	56368	1337	+	.	.
scaffold39134	subtractBed	intrn	57827	57873	.	-	.	Parent=CGI_10003186;
	scaffold39134	TRF	Tandem_Repeat	57827	57873	62	+	.	.
scaffold39134	subtractBed	intrn	54674	55141	.	-	.	Parent=CGI_10003186;
	scaffold39134	WUBlastX	RC_Helitron	54674	55141	43	-	.	.
scaffold39158	subtractBed	intrn	11164	11218	.	-	.	Parent=CGI_10003198;
	scaffold39158	TRF	Tandem_Repeat	11164	11218	58	+	.	.
scaffold39174	subtractBed	intrn	49493	49559	.	+	.	Parent=CGI_10003256;
	scaffold39174	TRF	Tandem_Repeat	49493	49559	89	+	.	.
scaffold39174	subtractBed	intrn	51948	51986	.	+	.	Parent=CGI_10003256;
	scaffold39174	TRF	Tandem_Repeat	51948	51986	78	+	.	.
scaffold39174	subtractBed	intrn	52718	52784	.	+	.	Parent=CGI_10003256;
	scaffold39174	TRF	Tandem_Repeat	52718	52784	89	+	.	.
scaffold39180	subtractBed	intrn	65421	65523	.	-	.	Parent=CGI_10003220;
	scaffold39180	TRF	Tandem_Repeat	65421	65523	77	+	.	.
scaffold39196	subtractBed	intrn	22444	24036	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	LTR_Gypsy	22444	24036	1043	+	.	.
scaffold39196	subtractBed	intrn	24003	25796	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	LTR_Gypsy	24003	25796	1285	+	.	.
scaffold39196	subtractBed	intrn	25931	25993	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	LTR_ERVK	25931	25993	22	+	.	.
scaffold39196	subtractBed	intrn	29123	30008	.	-	.	Parent=CGI_10003215;
	scaffold39196	TRF	Tandem_Repeat	29123	30008	1047	+	.	.
scaffold39196	subtractBed	intrn	31073	31114	.	-	.	Parent=CGI_10003215;
	scaffold39196	TRF	Tandem_Repeat	31073	31114	50	+	.	.
scaffold39196	subtractBed	intrn	37675	38247	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	37675	38247	113	-	.	.
scaffold39196	subtractBed	intrn	37921	38223	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	37921	38223	189	-	.	.
scaffold39196	subtractBed	intrn	38223	38399	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	38223	38399	91	-	.	.
scaffold39196	subtractBed	intrn	38396	38824	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	38396	38824	45	-	.	.
scaffold39196	subtractBed	intrn	37169	37273	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	37169	37273	24	-	.	.
scaffold39196	subtractBed	intrn	38815	39003	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	38815	39003	69	-	.	.
scaffold39196	subtractBed	intrn	37939	38328	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	RC_Helitron	37939	38328	137	-	.	.
scaffold39196	subtractBed	intrn	43354	43495	.	-	.	Parent=CGI_10003215;
	scaffold39196	TRF	Tandem_Repeat	43354	43495	96	+	.	.
scaffold39196	subtractBed	intrn	43606	43631	.	-	.	Parent=CGI_10003215;
	scaffold39196	TRF	Tandem_Repeat	43606	43631	52	+	.	.
scaffold39196	subtractBed	intrn	49826	50152	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	DNA_Merlin	49826	50152	73	+	.	.
scaffold39196	subtractBed	intrn	50185	50262	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	DNA_Merlin	50185	50262	40	+	.	.
scaffold39196	subtractBed	intrn	50161	50250	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	DNA_Merlin	50161	50250	34	+	.	.
scaffold39196	subtractBed	intrn	50391	50810	.	-	.	Parent=CGI_10003215;
	scaffold39196	WUBlastX	DNA_Merlin	50391	50810	158	+	.	.
scaffold39196	subtractBed	intrn	22444	24036	.	+	.	Parent=CGI_10003216;
	scaffold39196	WUBlastX	LTR_Gypsy	22444	24036	1043	+	.	.
scaffold39196	subtractBed	intrn	24003	25796	.	+	.	Parent=CGI_10003216;
	scaffold39196	WUBlastX	LTR_Gypsy	24003	25796	1285	+	.	.
scaffold39196	subtractBed	intrn	25931	25993	.	+	.	Parent=CGI_10003216;
	scaffold39196	WUBlastX	LTR_ERVK	25931	25993	22	+	.	.
scaffold39196	subtractBed	intrn	43354	43495	.	+	.	Parent=CGI_10003218;
	scaffold39196	TRF	Tandem_Repeat	43354	43495	96	+	.	.
scaffold39196	subtractBed	intrn	43606	43631	.	+	.	Parent=CGI_10003218;
	scaffold39196	TRF	Tandem_Repeat	43606	43631	52	+	.	.
scaffold39196	subtractBed	intrn	49826	50152	.	+	.	Parent=CGI_10003218;
	scaffold39196	WUBlastX	DNA_Merlin	49826	50152	73	+	.	.
scaffold39196	subtractBed	intrn	50185	50262	.	+	.	Parent=CGI_10003218;
	scaffold39196	WUBlastX	DNA_Merlin	50185	50262	40	+	.	.
scaffold39196	subtractBed	intrn	50161	50250	.	+	.	Parent=CGI_10003218;
	scaffold39196	WUBlastX	DNA_Merlin	50161	50250	34	+	.	.
scaffold39196	subtractBed	intrn	50391	50810	.	+	.	Parent=CGI_10003218;
	scaffold39196	WUBlastX	DNA_Merlin	50391	50810	158	+	.	.
scaffold39198	subtractBed	intrn	46312	46349	.	+	.	Parent=CGI_10003207;
	scaffold39198	TRF	Tandem_Repeat	46312	46349	76	+	.	.
scaffold39198	subtractBed	intrn	46413	46444	.	+	.	Parent=CGI_10003207;
	scaffold39198	TRF	Tandem_Repeat	46413	46444	55	+	.	.
scaffold39198	subtractBed	intrn	46494	46533	.	+	.	Parent=CGI_10003207;
	scaffold39198	TRF	Tandem_Repeat	46494	46533	80	+	.	.
scaffold39198	subtractBed	intrn	46714	46758	.	+	.	Parent=CGI_10003207;
	scaffold39198	TRF	Tandem_Repeat	46714	46758	90	+	.	.
scaffold39198	subtractBed	intrn	46870	46903	.	+	.	Parent=CGI_10003207;
	scaffold39198	TRF	Tandem_Repeat	46870	46903	68	+	.	.
scaffold39198	subtractBed	intrn	56481	56591	.	+	.	Parent=CGI_10003208;
	scaffold39198	TRF	Tandem_Repeat	56481	56591	88	+	.	.
scaffold39198	subtractBed	intrn	56500	56712	.	+	.	Parent=CGI_10003208;
	scaffold39198	TRF	Tandem_Repeat	56500	56712	356	+	.	.
scaffold39198	subtractBed	intrn	56516	56710	.	+	.	Parent=CGI_10003208;
	scaffold39198	TRF	Tandem_Repeat	56516	56710	141	+	.	.
scaffold392	subtractBed	intrn	22341	22478	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	22341	22478	93	+	.	.
scaffold392	subtractBed	intrn	22370	22479	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	22370	22479	112	+	.	.
scaffold392	subtractBed	intrn	39125	39186	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	39125	39186	90	+	.	.
scaffold392	subtractBed	intrn	40648	40701	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	40648	40701	99	+	.	.
scaffold392	subtractBed	intrn	36173	36241	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	36173	36241	30	-	.	.
scaffold392	subtractBed	intrn	38338	38520	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	38338	38520	50	-	.	.
scaffold392	subtractBed	intrn	37918	38169	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	37918	38169	65	-	.	.
scaffold392	subtractBed	intrn	35306	35866	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	35306	35866	78	-	.	.
scaffold392	subtractBed	intrn	35878	36018	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	35878	36018	82	-	.	.
scaffold392	subtractBed	intrn	35561	35860	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy-Cigr	35561	35860	92	-	.	.
scaffold392	subtractBed	intrn	38338	38472	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	38338	38472	96	-	.	.
scaffold392	subtractBed	intrn	37921	38124	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy-Cigr	37921	38124	83	-	.	.
scaffold392	subtractBed	intrn	38338	38574	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	38338	38574	24	-	.	.
scaffold392	subtractBed	intrn	36015	36191	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	36015	36191	64	-	.	.
scaffold392	subtractBed	intrn	37975	38286	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	37975	38286	22	-	.	.
scaffold392	subtractBed	intrn	36015	36407	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	36015	36407	21	-	.	.
scaffold392	subtractBed	intrn	36024	36317	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	LTR_Gypsy	36024	36317	25	-	.	.
scaffold392	subtractBed	intrn	45272	45315	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	45272	45315	88	+	.	.
scaffold392	subtractBed	intrn	46393	46623	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	DNA_Kolobok	46393	46623	25	+	.	.
scaffold392	subtractBed	intrn	46125	46229	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	DNA_Kolobok	46125	46229	24	+	.	.
scaffold392	subtractBed	intrn	46396	46590	.	+	.	Parent=CGI_10024202;
	scaffold392	WUBlastX	DNA_Kolobok	46396	46590	28	+	.	.
scaffold392	subtractBed	intrn	50052	50129	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	50052	50129	156	+	.	.
scaffold392	subtractBed	intrn	53504	53559	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	53504	53559	58	+	.	.
scaffold392	subtractBed	intrn	64413	64473	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	64413	64473	50	+	.	.
scaffold392	subtractBed	intrn	64413	64528	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	64413	64528	53	+	.	.
scaffold392	subtractBed	intrn	65712	65756	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	65712	65756	67	+	.	.
scaffold392	subtractBed	intrn	66663	66703	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	66663	66703	82	+	.	.
scaffold392	subtractBed	intrn	67201	67384	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	67201	67384	98	+	.	.
scaffold392	subtractBed	intrn	67284	67374	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	67284	67374	91	+	.	.
scaffold392	subtractBed	intrn	67360	67420	.	+	.	Parent=CGI_10024202;
	scaffold392	TRF	Tandem_Repeat	67360	67420	50	+	.	.
scaffold392	subtractBed	intrn	176274	176327	.	+	.	Parent=CGI_10024204;
	scaffold392	TRF	Tandem_Repeat	176274	176327	108	+	.	.
scaffold392	subtractBed	intrn	179196	179241	.	+	.	Parent=CGI_10024204;
	scaffold392	TRF	Tandem_Repeat	179196	179241	83	+	.	.
scaffold392	subtractBed	intrn	179324	179640	.	+	.	Parent=CGI_10024204;
	scaffold392	TRF	Tandem_Repeat	179324	179640	114	+	.	.
scaffold392	subtractBed	intrn	261588	261901	.	+	.	Parent=CGI_10024210;
	scaffold392	TRF	Tandem_Repeat	261588	261901	458	+	.	.
scaffold392	subtractBed	intrn	321292	321352	.	-	.	Parent=CGI_10024211;
	scaffold392	TRF	Tandem_Repeat	321292	321352	122	+	.	.
scaffold392	subtractBed	intrn	341965	342119	.	+	.	Parent=CGI_10024214;
	scaffold392	WUBlastX	LINE_RTE-X	341965	342345	57	-	.	.
scaffold392	subtractBed	intrn	422645	422749	.	+	.	Parent=CGI_10024216;
	scaffold392	WUBlastX	LINE_L2	422645	422854	64	+	.	.
scaffold392	subtractBed	intrn	450453	452798	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_RTE-X	450453	452798	669	-	.	.
scaffold392	subtractBed	intrn	444509	445024	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_L2	444509	445024	175	+	.	.
scaffold392	subtractBed	intrn	448886	450448	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_RTE-BovB	448886	450448	269	-	.	.
scaffold392	subtractBed	intrn	448312	448623	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_RTE-X	448312	448623	70	-	.	.
scaffold392	subtractBed	intrn	448189	448626	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_RTE-X	448189	448626	45	-	.	.
scaffold392	subtractBed	intrn	448661	450142	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_RTE-X	448661	450142	657	-	.	.
scaffold392	subtractBed	intrn	444459	444880	.	+	.	Parent=CGI_10024218;
	scaffold392	WUBlastX	LINE_L1	444383	444880	30	+	.	.
scaffold392	subtractBed	intrn	485824	485857	.	-	.	Parent=CGI_10024220;
	scaffold392	TRF	Tandem_Repeat	485824	485857	50	+	.	.
scaffold392	subtractBed	intrn	494642	494698	.	-	.	Parent=CGI_10024220;
	scaffold392	TRF	Tandem_Repeat	494642	494698	114	+	.	.
scaffold392	subtractBed	intrn	494890	494953	.	-	.	Parent=CGI_10024220;
	scaffold392	TRF	Tandem_Repeat	494890	494953	65	+	.	.
scaffold392	subtractBed	intrn	509663	510157	.	+	.	Parent=CGI_10024222;
	scaffold392	WUBlastX	LINE_L2	509663	510157	75	-	.	.
scaffold392	subtractBed	intrn	529527	529590	.	+	.	Parent=CGI_10024222;
	scaffold392	TRF	Tandem_Repeat	529527	529590	128	+	.	.
scaffold392	subtractBed	intrn	542458	542529	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	542458	542529	71	+	.	.
scaffold392	subtractBed	intrn	548547	548585	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	548547	548585	51	+	.	.
scaffold392	subtractBed	intrn	550848	550876	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	550848	550876	58	+	.	.
scaffold392	subtractBed	intrn	558869	558913	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	558869	558913	90	+	.	.
scaffold392	subtractBed	intrn	560978	561024	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	560978	561024	76	+	.	.
scaffold392	subtractBed	intrn	561068	561120	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	561068	561120	106	+	.	.
scaffold392	subtractBed	intrn	561164	561208	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	561164	561208	90	+	.	.
scaffold392	subtractBed	intrn	561420	561444	.	-	.	Parent=CGI_10024223;
	scaffold392	TRF	Tandem_Repeat	561420	561444	50	+	.	.
scaffold392	subtractBed	intrn	570416	570529	.	-	.	Parent=CGI_10024224;
	scaffold392	TRF	Tandem_Repeat	570416	570529	149	+	.	.
scaffold392	subtractBed	intrn	576664	576703	.	-	.	Parent=CGI_10024224;
	scaffold392	TRF	Tandem_Repeat	576664	576703	71	+	.	.
scaffold392	subtractBed	intrn	577699	577927	.	-	.	Parent=CGI_10024224;
	scaffold392	TRF	Tandem_Repeat	577699	577927	278	+	.	.
scaffold392	subtractBed	intrn	580381	580413	.	-	.	Parent=CGI_10024224;
	scaffold392	TRF	Tandem_Repeat	580381	580413	66	+	.	.
scaffold392	subtractBed	intrn	723506	723570	.	-	.	Parent=CGI_10024233;
	scaffold392	TRF	Tandem_Repeat	723506	723570	94	+	.	.
scaffold392	subtractBed	intrn	745081	746081	.	-	.	Parent=CGI_10024235;
	scaffold392	TRF	Tandem_Repeat	745081	746081	1541	+	.	.
scaffold392	subtractBed	intrn	786602	786888	.	-	.	Parent=CGI_10024236;
	scaffold392	TRF	Tandem_Repeat	786602	786888	360	+	.	.
scaffold392	subtractBed	intrn	791044	791138	.	-	.	Parent=CGI_10024236;
	scaffold392	TRF	Tandem_Repeat	791044	791138	95	+	.	.
scaffold392	subtractBed	intrn	791220	791313	.	-	.	Parent=CGI_10024236;
	scaffold392	TRF	Tandem_Repeat	791220	791313	118	+	.	.
scaffold392	subtractBed	intrn	788990	789265	.	-	.	Parent=CGI_10024236;
	scaffold392	WUBlastX	LINE_CR1-L2	788990	789265	67	+	.	.
scaffold392	subtractBed	intrn	789259	789372	.	-	.	Parent=CGI_10024236;
	scaffold392	WUBlastX	LINE_CR1-L2	789259	789372	26	+	.	.
scaffold392	subtractBed	intrn	788996	789214	.	-	.	Parent=CGI_10024236;
	scaffold392	WUBlastX	LINE_CR1-L2	788996	789214	96	+	.	.
scaffold392	subtractBed	intrn	823583	823613	.	-	.	Parent=CGI_10024237;
	scaffold392	TRF	Tandem_Repeat	823583	823613	62	+	.	.
scaffold392	subtractBed	intrn	896393	896731	.	-	.	Parent=CGI_10024239;
	scaffold392	WUBlastX	DNA_Kolobok	896393	896731	87	-	.	.
scaffold392	subtractBed	intrn	896988	897230	.	-	.	Parent=CGI_10024239;
	scaffold392	WUBlastX	DNA_Kolobok	896988	897230	111	-	.	.
scaffold392	subtractBed	intrn	897361	897576	.	-	.	Parent=CGI_10024239;
	scaffold392	WUBlastX	DNA_Kolobok	897361	897576	44	-	.	.
scaffold392	subtractBed	intrn	898814	898862	.	-	.	Parent=CGI_10024239;
	scaffold392	TRF	Tandem_Repeat	898814	898862	98	+	.	.
scaffold392	subtractBed	intrn	898023	898208	.	-	.	Parent=CGI_10024239;
	scaffold392	WUBlastX	DNA_Kolobok	898023	898208	46	-	.	.
scaffold392	subtractBed	intrn	898456	898650	.	-	.	Parent=CGI_10024239;
	scaffold392	WUBlastX	DNA_Kolobok	898456	898650	35	-	.	.
scaffold39202	subtractBed	intrn	3843	3894	.	-	.	Parent=CGI_10003211;
	scaffold39202	TRF	Tandem_Repeat	3843	3894	104	+	.	.
scaffold39202	subtractBed	intrn	4956	5598	.	-	.	Parent=CGI_10003211;
	scaffold39202	TRF	Tandem_Repeat	4956	5598	318	+	.	.
scaffold39202	subtractBed	intrn	4963	5598	.	-	.	Parent=CGI_10003211;
	scaffold39202	TRF	Tandem_Repeat	4963	5598	433	+	.	.
scaffold39202	subtractBed	intrn	4954	5598	.	-	.	Parent=CGI_10003211;
	scaffold39202	TRF	Tandem_Repeat	4954	5598	453	+	.	.
scaffold39202	subtractBed	intrn	12042	12150	.	-	.	Parent=CGI_10003212;
	scaffold39202	TRF	Tandem_Repeat	12042	12150	155	+	.	.
scaffold39202	subtractBed	intrn	14901	14960	.	-	.	Parent=CGI_10003212;
	scaffold39202	TRF	Tandem_Repeat	14901	14960	111	+	.	.
scaffold39202	subtractBed	intrn	16039	16311	.	-	.	Parent=CGI_10003212;
	scaffold39202	TRF	Tandem_Repeat	16039	16311	366	+	.	.
scaffold39202	subtractBed	intrn	19320	21180	.	-	.	Parent=CGI_10003212;
	scaffold39202	TRF	Tandem_Repeat	19320	21180	3202	+	.	.
scaffold39202	subtractBed	intrn	21200	21235	.	-	.	Parent=CGI_10003212;
	scaffold39202	TRF	Tandem_Repeat	21200	21235	54	+	.	.
scaffold39202	subtractBed	intrn	54893	54937	.	+	.	Parent=CGI_10003213;
	scaffold39202	TRF	Tandem_Repeat	54893	54937	65	+	.	.
scaffold39212	subtractBed	intrn	46459	47070	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_Sola	46459	47070	91	-	.	.
scaffold39212	subtractBed	intrn	46480	47265	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_Sola	46480	47265	76	-	.	.
scaffold39212	subtractBed	intrn	46061	46516	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_Sola	46061	46516	98	-	.	.
scaffold39212	subtractBed	intrn	53097	53489	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	53097	53489	35	-	.	.
scaffold39212	subtractBed	intrn	54581	55246	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	54581	55246	264	-	.	.
scaffold39212	subtractBed	intrn	53067	53282	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	53067	53282	69	-	.	.
scaffold39212	subtractBed	intrn	53419	53571	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	53419	53571	33	-	.	.
scaffold39212	subtractBed	intrn	53094	53351	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	53094	53351	52	-	.	.
scaffold39212	subtractBed	intrn	54215	55078	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	54215	55078	53	-	.	.
scaffold39212	subtractBed	intrn	56519	56752	.	-	.	Parent=CGI_10003233;
	scaffold39212	WUBlastX	DNA_hAT-Tip100	56519	56752	37	-	.	.
scaffold39214	subtractBed	intrn	9894	9960	.	+	.	Parent=CGI_10003231;
	scaffold39214	TRF	Tandem_Repeat	9894	9960	89	+	.	.
scaffold39214	subtractBed	intrn	14291	14348	.	+	.	Parent=CGI_10003231;
	scaffold39214	TRF	Tandem_Repeat	14291	14348	73	+	.	.
scaffold39214	subtractBed	intrn	15704	15757	.	+	.	Parent=CGI_10003231;
	scaffold39214	TRF	Tandem_Repeat	15704	15757	65	+	.	.
scaffold39214	subtractBed	intrn	15703	15757	.	+	.	Parent=CGI_10003231;
	scaffold39214	TRF	Tandem_Repeat	15703	15757	85	+	.	.
scaffold39214	subtractBed	intrn	25901	25963	.	+	.	Parent=CGI_10003231;
	scaffold39214	TRF	Tandem_Repeat	25901	25963	126	+	.	.
scaffold39222	subtractBed	intrn	6462	6503	.	-	.	Parent=CGI_10003222;
	scaffold39222	TRF	Tandem_Repeat	6462	6503	84	+	.	.
scaffold39222	subtractBed	intrn	6502	6673	.	-	.	Parent=CGI_10003222;
	scaffold39222	TRF	Tandem_Repeat	6502	6673	164	+	.	.
scaffold39222	subtractBed	intrn	6503	6673	.	-	.	Parent=CGI_10003222;
	scaffold39222	TRF	Tandem_Repeat	6503	6673	186	+	.	.
scaffold39222	subtractBed	intrn	8809	8858	.	-	.	Parent=CGI_10003222;
	scaffold39222	TRF	Tandem_Repeat	8809	8858	100	+	.	.
scaffold39222	subtractBed	intrn	14395	14434	.	-	.	Parent=CGI_10003223;
	scaffold39222	TRF	Tandem_Repeat	14395	14434	53	+	.	.
scaffold39222	subtractBed	intrn	28176	28235	.	+	.	Parent=CGI_10003224;
	scaffold39222	TRF	Tandem_Repeat	28176	28235	111	+	.	.
scaffold39222	subtractBed	intrn	33628	33702	.	+	.	Parent=CGI_10003224;
	scaffold39222	TRF	Tandem_Repeat	33628	33702	150	+	.	.
scaffold39222	subtractBed	intrn	55020	55052	.	-	.	Parent=CGI_10003225;
	scaffold39222	TRF	Tandem_Repeat	55020	55052	59	+	.	.
scaffold39240	subtractBed	intrn	14252	14276	.	+	.	Parent=CGI_10003244;
	scaffold39240	TRF	Tandem_Repeat	14252	14276	50	+	.	.
scaffold39240	subtractBed	intrn	20951	20998	.	+	.	Parent=CGI_10003246;
	scaffold39240	TRF	Tandem_Repeat	20951	20998	96	+	.	.
scaffold39240	subtractBed	intrn	22383	22434	.	+	.	Parent=CGI_10003246;
	scaffold39240	TRF	Tandem_Repeat	22383	22434	104	+	.	.
scaffold39240	subtractBed	intrn	22494	22518	.	+	.	Parent=CGI_10003246;
	scaffold39240	TRF	Tandem_Repeat	22494	22518	50	+	.	.
scaffold39240	subtractBed	intrn	36714	37457	.	-	.	Parent=CGI_10003247;
	scaffold39240	WUBlastX	DNA_MuDR	36714	37457	247	+	.	.
scaffold39240	subtractBed	intrn	37254	37517	.	-	.	Parent=CGI_10003247;
	scaffold39240	WUBlastX	DNA_MuDR	37254	37517	40	+	.	.
scaffold39258	subtractBed	intrn	22748	22903	.	-	.	Parent=CGI_10003263;
	scaffold39258	WUBlastX	DNA_hAT-Tip100	22748	22903	90	-	.	.
scaffold39258	subtractBed	intrn	22763	23032	.	-	.	Parent=CGI_10003263;
	scaffold39258	WUBlastX	DNA_hAT-Tip100	22763	23032	47	-	.	.
scaffold39258	subtractBed	intrn	42662	42692	.	+	.	Parent=CGI_10003265;
	scaffold39258	TRF	Tandem_Repeat	42662	42692	62	+	.	.
scaffold39258	subtractBed	intrn	45870	45935	.	+	.	Parent=CGI_10003265;
	scaffold39258	TRF	Tandem_Repeat	45870	45935	132	+	.	.
scaffold39258	subtractBed	intrn	51234	51289	.	+	.	Parent=CGI_10003266;
	scaffold39258	TRF	Tandem_Repeat	51234	51289	85	+	.	.
scaffold39258	subtractBed	intrn	60194	60231	.	-	.	Parent=CGI_10003267;
	scaffold39258	TRF	Tandem_Repeat	60194	60231	67	+	.	.
scaffold39268	subtractBed	intrn	18960	19391	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	18960	19391	220	+	.	.
scaffold39268	subtractBed	intrn	17699	18346	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	17699	18346	132	+	.	.
scaffold39268	subtractBed	intrn	19319	20764	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	19319	20764	494	+	.	.
scaffold39268	subtractBed	intrn	18870	19376	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	18870	19376	37	+	.	.
scaffold39268	subtractBed	intrn	19029	19508	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	19029	19508	228	+	.	.
scaffold39268	subtractBed	intrn	17873	18445	.	-	.	Parent=CGI_10003274;
	scaffold39268	WUBlastX	LINE_L2	17873	18445	101	+	.	.
scaffold39268	subtractBed	intrn	25873	25923	.	-	.	Parent=CGI_10003274;
	scaffold39268	TRF	Tandem_Repeat	25873	25923	93	+	.	.
scaffold39268	subtractBed	intrn	25964	25998	.	-	.	Parent=CGI_10003274;
	scaffold39268	TRF	Tandem_Repeat	25964	25998	70	+	.	.
scaffold39268	subtractBed	intrn	40633	40989	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	40633	40989	204	+	.	.
scaffold39268	subtractBed	intrn	40167	40610	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	40167	40610	176	+	.	.
scaffold39268	subtractBed	intrn	40729	40989	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	40729	40989	232	+	.	.
scaffold39268	subtractBed	intrn	43735	43746	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	43735	43914	63	-	.	.
scaffold39268	subtractBed	intrn	46303	47120	.	-	.	Parent=CGI_10003275;
	scaffold39268	TRF	Tandem_Repeat	46303	47120	867	+	.	.
scaffold39268	subtractBed	intrn	47158	47254	.	-	.	Parent=CGI_10003275;
	scaffold39268	TRF	Tandem_Repeat	47158	47254	126	+	.	.
scaffold39268	subtractBed	intrn	47609	47812	.	-	.	Parent=CGI_10003275;
	scaffold39268	TRF	Tandem_Repeat	47609	47812	243	+	.	.
scaffold39268	subtractBed	intrn	43913	43914	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	43735	43914	63	-	.	.
scaffold39268	subtractBed	intrn	45842	46000	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_Harbinger	45842	46000	71	-	.	.
scaffold39268	subtractBed	intrn	49476	50585	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_En-Spm	49476	50585	441	-	.	.
scaffold39268	subtractBed	intrn	50564	51769	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_En-Spm	50564	51769	819	-	.	.
scaffold39268	subtractBed	intrn	51125	52084	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	DNA_En-Spm	51125	52084	24	-	.	.
scaffold39268	subtractBed	intrn	57305	57334	.	-	.	Parent=CGI_10003275;
	scaffold39268	TRF	Tandem_Repeat	57305	57334	60	+	.	.
scaffold39268	subtractBed	intrn	56706	57089	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	LINE_RTE-X	56706	57089	120	+	.	.
scaffold39268	subtractBed	intrn	56706	57005	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	LINE_RTE-X	56706	57005	175	+	.	.
scaffold39268	subtractBed	intrn	56667	57146	.	-	.	Parent=CGI_10003275;
	scaffold39268	WUBlastX	LINE_RTE-X	56667	57146	116	+	.	.
scaffold39268	subtractBed	intrn	63398	63640	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	63398	63640	86	+	.	.
scaffold39268	subtractBed	intrn	64111	64428	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	64111	64428	69	+	.	.
scaffold39268	subtractBed	intrn	63809	63976	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	63809	63976	80	+	.	.
scaffold39268	subtractBed	intrn	64120	64374	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	64120	64374	82	+	.	.
scaffold39268	subtractBed	intrn	63437	63634	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	63437	63634	97	+	.	.
scaffold39268	subtractBed	intrn	63857	64090	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	63857	64090	34	+	.	.
scaffold39268	subtractBed	intrn	63731	63985	.	+	.	Parent=CGI_10003276;
	scaffold39268	WUBlastX	DNA_MuDR	63731	63985	64	+	.	.
scaffold39268	subtractBed	intrn	67021	67054	.	+	.	Parent=CGI_10003276;
	scaffold39268	TRF	Tandem_Repeat	67021	67054	59	+	.	.
scaffold39274	subtractBed	intrn	66346	66397	.	-	.	Parent=CGI_10003279;
	scaffold39274	TRF	Tandem_Repeat	66346	66397	97	+	.	.
scaffold39274	subtractBed	intrn	66525	66568	.	-	.	Parent=CGI_10003279;
	scaffold39274	TRF	Tandem_Repeat	66525	66568	79	+	.	.
scaffold393	subtractBed	intrn	23370	23485	.	+	.	Parent=CGI_10026867;
	scaffold393	TRF	Tandem_Repeat	23370	23485	223	+	.	.
scaffold393	subtractBed	intrn	270893	271974	.	+	.	Parent=CGI_10026874;
	scaffold393	TRF	Tandem_Repeat	270893	271974	1522	+	.	.
scaffold393	subtractBed	intrn	304297	304393	.	+	.	Parent=CGI_10026876;
	scaffold393	TRF	Tandem_Repeat	304297	304393	185	+	.	.
scaffold393	subtractBed	intrn	349284	349622	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	349284	349622	53	+	.	.
scaffold393	subtractBed	intrn	351162	351500	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	351162	351500	53	+	.	.
scaffold393	subtractBed	intrn	349395	349613	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	349395	349613	83	+	.	.
scaffold393	subtractBed	intrn	351273	351491	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	351273	351491	83	+	.	.
scaffold393	subtractBed	intrn	349329	349607	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	349329	349607	72	+	.	.
scaffold393	subtractBed	intrn	351207	351485	.	+	.	Parent=CGI_10026879;
	scaffold393	WUBlastX	DNA_TcMar-Tc1	351207	351485	72	+	.	.
scaffold393	subtractBed	intrn	357018	357202	.	+	.	Parent=CGI_10026879;
	scaffold393	TRF	Tandem_Repeat	357018	357202	244	+	.	.
scaffold393	subtractBed	intrn	357018	357581	.	+	.	Parent=CGI_10026879;
	scaffold393	TRF	Tandem_Repeat	357018	357581	365	+	.	.
scaffold393	subtractBed	intrn	357285	357581	.	+	.	Parent=CGI_10026879;
	scaffold393	TRF	Tandem_Repeat	357285	357581	265	+	.	.
scaffold393	subtractBed	intrn	417216	417646	.	-	.	Parent=CGI_10026888;
	scaffold393	TRF	Tandem_Repeat	417216	417674	638	+	.	.
scaffold393	subtractBed	intrn	421428	422334	.	+	.	Parent=CGI_10026889;
	scaffold393	TRF	Tandem_Repeat	421428	422334	1331	+	.	.
scaffold393	subtractBed	intrn	441515	441985	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	441515	441985	754	+	.	.
scaffold393	subtractBed	intrn	441515	441985	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	441515	441985	749	+	.	.
scaffold393	subtractBed	intrn	441515	441985	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	441515	441985	795	+	.	.
scaffold393	subtractBed	intrn	441579	441982	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	441579	441982	110	+	.	.
scaffold393	subtractBed	intrn	442523	442634	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	442523	442644	139	+	.	.
scaffold393	subtractBed	intrn	442523	442634	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	442523	442647	159	+	.	.
scaffold393	subtractBed	intrn	445308	445377	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	445308	445377	122	+	.	.
scaffold393	subtractBed	intrn	445401	446360	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	445401	446360	1363	+	.	.
scaffold393	subtractBed	intrn	449430	449532	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	449430	449532	143	+	.	.
scaffold393	subtractBed	intrn	449593	449822	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	449593	449822	270	+	.	.
scaffold393	subtractBed	intrn	449593	449822	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	449593	449822	325	+	.	.
scaffold393	subtractBed	intrn	452339	452527	.	-	.	Parent=CGI_10026892;
	scaffold393	TRF	Tandem_Repeat	452339	452527	369	+	.	.
scaffold393	subtractBed	intrn	462810	462870	.	+	.	Parent=CGI_10026893;
	scaffold393	TRF	Tandem_Repeat	462810	462870	104	+	.	.
scaffold393	subtractBed	intrn	467774	467961	.	+	.	Parent=CGI_10026893;
	scaffold393	TRF	Tandem_Repeat	467774	467961	103	+	.	.
scaffold393	subtractBed	intrn	474550	475569	.	+	.	Parent=CGI_10026894;
	scaffold393	TRF	Tandem_Repeat	474516	475569	1268	+	.	.
scaffold393	subtractBed	intrn	474550	475569	.	+	.	Parent=CGI_10026894;
	scaffold393	TRF	Tandem_Repeat	474516	475569	1297	+	.	.
scaffold393	subtractBed	intrn	494281	494327	.	-	.	Parent=CGI_10026895;
	scaffold393	TRF	Tandem_Repeat	494281	494327	69	+	.	.
scaffold393	subtractBed	intrn	504472	504655	.	+	.	Parent=CGI_10026896;
	scaffold393	TRF	Tandem_Repeat	504472	504655	89	+	.	.
scaffold393	subtractBed	intrn	548752	548792	.	+	.	Parent=CGI_10026901;
	scaffold393	TRF	Tandem_Repeat	548752	548792	73	+	.	.
scaffold393	subtractBed	intrn	555116	555639	.	+	.	Parent=CGI_10026901;
	scaffold393	TRF	Tandem_Repeat	555116	555639	785	+	.	.
scaffold393	subtractBed	intrn	556932	556989	.	+	.	Parent=CGI_10026901;
	scaffold393	TRF	Tandem_Repeat	556932	556989	107	+	.	.
scaffold393	subtractBed	intrn	558901	558961	.	+	.	Parent=CGI_10026901;
	scaffold393	TRF	Tandem_Repeat	558901	558961	79	+	.	.
scaffold393	subtractBed	intrn	562737	562977	.	+	.	Parent=CGI_10026901;
	scaffold393	TRF	Tandem_Repeat	562737	562977	376	+	.	.
scaffold393	subtractBed	intrn	576642	576697	.	-	.	Parent=CGI_10026903;
	scaffold393	TRF	Tandem_Repeat	576642	576697	112	+	.	.
scaffold393	subtractBed	intrn	618191	618217	.	+	.	Parent=CGI_10026908;
	scaffold393	TRF	Tandem_Repeat	618191	618217	54	+	.	.
scaffold393	subtractBed	intrn	684353	684402	.	+	.	Parent=CGI_10026910;
	scaffold393	TRF	Tandem_Repeat	684353	684402	55	+	.	.
scaffold393	subtractBed	intrn	685905	686182	.	+	.	Parent=CGI_10026910;
	scaffold393	TRF	Tandem_Repeat	685905	686182	439	+	.	.
scaffold393	subtractBed	intrn	721711	721944	.	+	.	Parent=CGI_10026911;
	scaffold393	WUBlastX	LINE_RTE-X	721711	721944	50	-	.	.
scaffold393	subtractBed	intrn	721753	722076	.	+	.	Parent=CGI_10026911;
	scaffold393	WUBlastX	LINE_RTE-X	721753	722076	27	-	.	.
scaffold393	subtractBed	intrn	902567	902600	.	+	.	Parent=CGI_10026916;
	scaffold393	TRF	Tandem_Repeat	902567	902600	59	+	.	.
scaffold393	subtractBed	intrn	919545	919582	.	+	.	Parent=CGI_10026917;
	scaffold393	TRF	Tandem_Repeat	919545	919582	58	+	.	.
scaffold393	subtractBed	intrn	929487	929527	.	+	.	Parent=CGI_10026917;
	scaffold393	TRF	Tandem_Repeat	929487	929527	82	+	.	.
scaffold393	subtractBed	intrn	930742	930917	.	+	.	Parent=CGI_10026917;
	scaffold393	TRF	Tandem_Repeat	930742	930917	127	+	.	.
scaffold393	subtractBed	intrn	1012581	1012786	.	-	.	Parent=CGI_10026918;
	scaffold393	TRF	Tandem_Repeat	1012581	1012786	267	+	.	.
scaffold393	subtractBed	intrn	1012602	1012786	.	-	.	Parent=CGI_10026918;
	scaffold393	TRF	Tandem_Repeat	1012602	1012786	311	+	.	.
scaffold393	subtractBed	intrn	1030008	1030550	.	-	.	Parent=CGI_10026919;
	scaffold393	TRF	Tandem_Repeat	1030008	1030550	951	+	.	.
scaffold393	subtractBed	intrn	1041469	1041978	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1041469	1041978	193	-	.	.
scaffold393	subtractBed	intrn	1040170	1040412	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1040170	1040412	85	-	.	.
scaffold393	subtractBed	intrn	1041466	1041843	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1041466	1041843	223	-	.	.
scaffold393	subtractBed	intrn	1043376	1043525	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1043376	1043525	33	-	.	.
scaffold393	subtractBed	intrn	1042826	1042972	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1042826	1042972	36	-	.	.
scaffold393	subtractBed	intrn	1041837	1042193	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1041837	1042193	33	-	.	.
scaffold393	subtractBed	intrn	1041935	1042108	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_L1-Tx1	1041935	1042108	46	-	.	.
scaffold393	subtractBed	intrn	1043343	1043510	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1043343	1043510	31	-	.	.
scaffold393	subtractBed	intrn	1042716	1042775	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_Rex-Babar	1042716	1042775	20	-	.	.
scaffold393	subtractBed	intrn	1043385	1043633	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_CR1	1043385	1043633	21	-	.	.
scaffold393	subtractBed	intrn	1043023	1043235	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1043023	1043235	64	-	.	.
scaffold393	subtractBed	intrn	1041941	1042048	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_L1-Tx1	1041941	1042048	48	-	.	.
scaffold393	subtractBed	intrn	1043409	1043513	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1043409	1043513	35	-	.	.
scaffold393	subtractBed	intrn	1040227	1040445	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1040227	1040445	98	-	.	.
scaffold393	subtractBed	intrn	1040444	1041454	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1040444	1041454	276	-	.	.
scaffold393	subtractBed	intrn	1042835	1042951	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-X	1042835	1042951	66	-	.	.
scaffold393	subtractBed	intrn	1043487	1043588	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	LINE_RTE-BovB	1043487	1043588	24	-	.	.
scaffold393	subtractBed	intrn	1052448	1052496	.	-	.	Parent=CGI_10026919;
	scaffold393	TRF	Tandem_Repeat	1052448	1052496	89	+	.	.
scaffold393	subtractBed	intrn	1056750	1057616	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	DNA_Harbinger	1056750	1057616	187	-	.	.
scaffold393	subtractBed	intrn	1056903	1057622	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	DNA_Harbinger	1056903	1057622	278	-	.	.
scaffold393	subtractBed	intrn	1057589	1057765	.	-	.	Parent=CGI_10026919;
	scaffold393	WUBlastX	DNA_Harbinger	1057589	1057765	71	-	.	.
scaffold393	subtractBed	intrn	1066016	1068312	.	+	.	Parent=CGI_10026920;
	scaffold393	TRF	Tandem_Repeat	1066016	1068312	818	+	.	.
scaffold393	subtractBed	intrn	1115689	1115739	.	-	.	Parent=CGI_10026925;
	scaffold393	TRF	Tandem_Repeat	1115689	1115739	102	+	.	.
scaffold393	subtractBed	intrn	1165243	1165475	.	+	.	Parent=CGI_10026928;
	scaffold393	TRF	Tandem_Repeat	1165243	1165475	161	+	.	.
scaffold393	subtractBed	intrn	1166092	1166185	.	+	.	Parent=CGI_10026928;
	scaffold393	TRF	Tandem_Repeat	1166092	1166185	125	+	.	.
scaffold393	subtractBed	intrn	1166232	1166320	.	+	.	Parent=CGI_10026928;
	scaffold393	TRF	Tandem_Repeat	1166232	1166320	128	+	.	.
scaffold393	subtractBed	intrn	1191618	1191890	.	-	.	Parent=CGI_10026931;
	scaffold393	WUBlastX	DNA_hAT-Blackja	1191618	1191890	71	+	.	.
scaffold393	subtractBed	intrn	1193436	1193478	.	-	.	Parent=CGI_10026931;
	scaffold393	TRF	Tandem_Repeat	1193436	1193478	52	+	.	.
scaffold39320	subtractBed	intrn	55501	55594	.	-	.	Parent=CGI_10003324;
	scaffold39320	TRF	Tandem_Repeat	55501	55594	60	+	.	.
scaffold39320	subtractBed	intrn	58530	58801	.	-	.	Parent=CGI_10003324;
	scaffold39320	TRF	Tandem_Repeat	58530	58801	368	+	.	.
scaffold39320	subtractBed	intrn	64476	64518	.	-	.	Parent=CGI_10003324;
	scaffold39320	TRF	Tandem_Repeat	64476	64518	86	+	.	.
scaffold39334	subtractBed	intrn	5422	5470	.	-	.	Parent=CGI_10003302;
	scaffold39334	TRF	Tandem_Repeat	5422	5470	57	+	.	.
scaffold39358	subtractBed	intrn	37602	37955	.	+	.	Parent=CGI_10003326;
	scaffold39358	WUBlastX	DNA_IS4EU	37602	37955	35	+	.	.
scaffold39358	subtractBed	intrn	37946	37966	.	+	.	Parent=CGI_10003326;
	scaffold39358	WUBlastX	DNA_IS4EU	37946	38419	268	+	.	.
scaffold39358	subtractBed	intrn	37704	37958	.	+	.	Parent=CGI_10003326;
	scaffold39358	WUBlastX	DNA_IS4EU	37704	37958	64	+	.	.
scaffold39364	subtractBed	intrn	27134	27202	.	-	.	Parent=CGI_10003331;
	scaffold39364	TRF	Tandem_Repeat	27134	27202	120	+	.	.
scaffold39364	subtractBed	intrn	27131	27202	.	-	.	Parent=CGI_10003331;
	scaffold39364	TRF	Tandem_Repeat	27131	27202	90	+	.	.
scaffold39364	subtractBed	intrn	27134	27202	.	+	.	Parent=CGI_10003332;
	scaffold39364	TRF	Tandem_Repeat	27134	27202	120	+	.	.
scaffold39364	subtractBed	intrn	27131	27202	.	+	.	Parent=CGI_10003332;
	scaffold39364	TRF	Tandem_Repeat	27131	27202	90	+	.	.
scaffold39364	subtractBed	intrn	46546	46614	.	+	.	Parent=CGI_10003332;
	scaffold39364	TRF	Tandem_Repeat	46546	46614	106	+	.	.
scaffold39364	subtractBed	intrn	49345	49390	.	+	.	Parent=CGI_10003332;
	scaffold39364	TRF	Tandem_Repeat	49345	49390	85	+	.	.
scaffold39364	subtractBed	intrn	49432	49460	.	+	.	Parent=CGI_10003332;
	scaffold39364	TRF	Tandem_Repeat	49432	49460	51	+	.	.
scaffold39364	subtractBed	intrn	53684	53710	.	-	.	Parent=CGI_10003333;
	scaffold39364	TRF	Tandem_Repeat	53684	53710	54	+	.	.
scaffold39368	subtractBed	intrn	33626	33693	.	+	.	Parent=CGI_10003310;
	scaffold39368	TRF	Tandem_Repeat	33626	33693	118	+	.	.
scaffold39368	subtractBed	intrn	39784	39984	.	+	.	Parent=CGI_10003310;
	scaffold39368	TRF	Tandem_Repeat	39784	39984	166	+	.	.
scaffold39368	subtractBed	intrn	48303	48338	.	+	.	Parent=CGI_10003310;
	scaffold39368	TRF	Tandem_Repeat	48303	48338	72	+	.	.
scaffold39368	subtractBed	intrn	51891	52055	.	+	.	Parent=CGI_10003310;
	scaffold39368	TRF	Tandem_Repeat	51891	52055	118	+	.	.
scaffold39380	subtractBed	intrn	39175	39994	.	-	.	Parent=CGI_10003328;
	scaffold39380	TRF	Tandem_Repeat	39175	39994	1173	+	.	.
scaffold39394	subtractBed	intrn	26223	26256	.	+	.	Parent=CGI_10003357;
	scaffold39394	TRF	Tandem_Repeat	26223	26256	68	+	.	.
scaffold39394	subtractBed	intrn	28300	28302	.	+	.	Parent=CGI_10003357;
	scaffold39394	WUBlastX	DNA_Harbinger	28300	28677	61	+	.	.
scaffold39394	subtractBed	intrn	28648	28677	.	+	.	Parent=CGI_10003357;
	scaffold39394	WUBlastX	DNA_Harbinger	28300	28677	61	+	.	.
scaffold394	subtractBed	intrn	20607	20728	.	-	.	Parent=CGI_10022058;
	scaffold394	TRF	Tandem_Repeat	20607	20728	113	+	.	.
scaffold394	subtractBed	intrn	21096	21152	.	-	.	Parent=CGI_10022058;
	scaffold394	TRF	Tandem_Repeat	21096	21152	114	+	.	.
scaffold394	subtractBed	intrn	25244	25332	.	+	.	Parent=CGI_10022059;
	scaffold394	TRF	Tandem_Repeat	25244	25332	81	+	.	.
scaffold394	subtractBed	intrn	50927	50974	.	-	.	Parent=CGI_10022062;
	scaffold394	TRF	Tandem_Repeat	50927	50974	96	+	.	.
scaffold394	subtractBed	intrn	60641	60826	.	-	.	Parent=CGI_10022062;
	scaffold394	TRF	Tandem_Repeat	60641	60826	126	+	.	.
scaffold394	subtractBed	intrn	60641	60826	.	+	.	Parent=CGI_10022063;
	scaffold394	TRF	Tandem_Repeat	60641	60826	126	+	.	.
scaffold394	subtractBed	intrn	62700	62836	.	+	.	Parent=CGI_10022063;
	scaffold394	TRF	Tandem_Repeat	62700	62836	78	+	.	.
scaffold394	subtractBed	intrn	172709	173092	.	-	.	Parent=CGI_10022068;
	scaffold394	TRF	Tandem_Repeat	172709	173092	716	+	.	.
scaffold394	subtractBed	intrn	198136	198492	.	-	.	Parent=CGI_10022070;
	scaffold394	TRF	Tandem_Repeat	198136	198492	420	+	.	.
scaffold394	subtractBed	intrn	198106	198492	.	-	.	Parent=CGI_10022070;
	scaffold394	TRF	Tandem_Repeat	198106	198492	480	+	.	.
scaffold394	subtractBed	intrn	201989	202025	.	-	.	Parent=CGI_10022070;
	scaffold394	TRF	Tandem_Repeat	201989	202025	74	+	.	.
scaffold394	subtractBed	intrn	216910	216955	.	-	.	Parent=CGI_10022071;
	scaffold394	TRF	Tandem_Repeat	216910	216955	76	+	.	.
scaffold394	subtractBed	intrn	231300	231380	.	+	.	Parent=CGI_10022073;
	scaffold394	TRF	Tandem_Repeat	231300	231380	162	+	.	.
scaffold394	subtractBed	intrn	243937	244037	.	+	.	Parent=CGI_10022073;
	scaffold394	TRF	Tandem_Repeat	243937	244037	139	+	.	.
scaffold394	subtractBed	intrn	253719	253744	.	+	.	Parent=CGI_10022073;
	scaffold394	TRF	Tandem_Repeat	253719	253744	52	+	.	.
scaffold394	subtractBed	intrn	256944	256986	.	+	.	Parent=CGI_10022073;
	scaffold394	TRF	Tandem_Repeat	256944	256986	86	+	.	.
scaffold394	subtractBed	intrn	281673	281736	.	-	.	Parent=CGI_10022076;
	scaffold394	TRF	Tandem_Repeat	281673	281736	128	+	.	.
scaffold394	subtractBed	intrn	293295	293537	.	+	.	Parent=CGI_10022077;
	scaffold394	WUBlastX	DNA_Kolobok	293295	293537	101	-	.	.
scaffold394	subtractBed	intrn	292104	292223	.	+	.	Parent=CGI_10022077;
	scaffold394	WUBlastX	DNA_Kolobok	292104	292223	20	+	.	.
scaffold394	subtractBed	intrn	292479	292697	.	+	.	Parent=CGI_10022077;
	scaffold394	WUBlastX	DNA_Kolobok	292479	292697	92	+	.	.
scaffold394	subtractBed	intrn	302167	302216	.	+	.	Parent=CGI_10022078;
	scaffold394	TRF	Tandem_Repeat	302167	302216	66	+	.	.
scaffold394	subtractBed	intrn	312939	312984	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	312939	312984	92	+	.	.
scaffold394	subtractBed	intrn	321157	321187	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	321157	321187	62	+	.	.
scaffold394	subtractBed	intrn	326541	326578	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	326541	326578	51	+	.	.
scaffold394	subtractBed	intrn	326716	327618	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	326716	327618	1314	+	.	.
scaffold394	subtractBed	intrn	328551	328696	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	328551	328696	73	+	.	.
scaffold394	subtractBed	intrn	328613	328760	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	328613	328760	102	+	.	.
scaffold394	subtractBed	intrn	338474	338504	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	338474	338504	62	+	.	.
scaffold394	subtractBed	intrn	349068	349127	.	-	.	Parent=CGI_10022079;
	scaffold394	TRF	Tandem_Repeat	349068	349127	50	+	.	.
scaffold394	subtractBed	intrn	326541	326578	.	+	.	Parent=CGI_10022080;
	scaffold394	TRF	Tandem_Repeat	326541	326578	51	+	.	.
scaffold394	subtractBed	intrn	326716	327618	.	+	.	Parent=CGI_10022080;
	scaffold394	TRF	Tandem_Repeat	326716	327618	1314	+	.	.
scaffold394	subtractBed	intrn	328551	328696	.	+	.	Parent=CGI_10022080;
	scaffold394	TRF	Tandem_Repeat	328551	328696	73	+	.	.
scaffold394	subtractBed	intrn	328613	328760	.	+	.	Parent=CGI_10022080;
	scaffold394	TRF	Tandem_Repeat	328613	328760	102	+	.	.
scaffold394	subtractBed	intrn	400693	400825	.	-	.	Parent=CGI_10022084;
	scaffold394	TRF	Tandem_Repeat	400693	400825	72	+	.	.
scaffold394	subtractBed	intrn	402821	402864	.	-	.	Parent=CGI_10022084;
	scaffold394	TRF	Tandem_Repeat	402821	402864	88	+	.	.
scaffold394	subtractBed	intrn	408770	408821	.	-	.	Parent=CGI_10022084;
	scaffold394	TRF	Tandem_Repeat	408770	408821	104	+	.	.
scaffold394	subtractBed	intrn	415036	415094	.	-	.	Parent=CGI_10022084;
	scaffold394	TRF	Tandem_Repeat	415036	415094	66	+	.	.
scaffold394	subtractBed	intrn	436623	437234	.	+	.	Parent=CGI_10022085;
	scaffold394	WUBlastX	LTR_DIRS	436623	437234	201	+	.	.
scaffold394	subtractBed	intrn	436776	437234	.	+	.	Parent=CGI_10022085;
	scaffold394	WUBlastX	LTR_DIRS	436776	437234	337	+	.	.
scaffold394	subtractBed	intrn	437007	437276	.	+	.	Parent=CGI_10022085;
	scaffold394	WUBlastX	LTR_Gypsy-Cigr	437007	437276	77	+	.	.
scaffold394	subtractBed	intrn	436485	437216	.	+	.	Parent=CGI_10022085;
	scaffold394	WUBlastX	LTR_Gypsy	436485	437216	20	+	.	.
scaffold394	subtractBed	intrn	449700	449842	.	+	.	Parent=CGI_10022085;
	scaffold394	TRF	Tandem_Repeat	449700	449842	175	+	.	.
scaffold394	subtractBed	intrn	451039	451081	.	-	.	Parent=CGI_10022086;
	scaffold394	TRF	Tandem_Repeat	451039	451081	50	+	.	.
scaffold394	subtractBed	intrn	455091	455122	.	-	.	Parent=CGI_10022086;
	scaffold394	TRF	Tandem_Repeat	455091	455122	64	+	.	.
scaffold394	subtractBed	intrn	492553	492604	.	-	.	Parent=CGI_10022088;
	scaffold394	TRF	Tandem_Repeat	492553	492604	95	+	.	.
scaffold394	subtractBed	intrn	492814	492853	.	-	.	Parent=CGI_10022088;
	scaffold394	TRF	Tandem_Repeat	492814	492853	80	+	.	.
scaffold394	subtractBed	intrn	492981	493127	.	-	.	Parent=CGI_10022088;
	scaffold394	WUBlastX	DNA_Harbinger	492981	493127	62	+	.	.
scaffold394	subtractBed	intrn	493368	493526	.	-	.	Parent=CGI_10022088;
	scaffold394	WUBlastX	DNA_Harbinger	493368	493526	48	+	.	.
scaffold394	subtractBed	intrn	493410	493547	.	-	.	Parent=CGI_10022088;
	scaffold394	WUBlastX	DNA_Harbinger	493410	493547	42	+	.	.
scaffold394	subtractBed	intrn	520139	520172	.	+	.	Parent=CGI_10022089;
	scaffold394	TRF	Tandem_Repeat	520139	520172	50	+	.	.
scaffold394	subtractBed	intrn	537588	537666	.	-	.	Parent=CGI_10022090;
	scaffold394	TRF	Tandem_Repeat	537588	537666	158	+	.	.
scaffold394	subtractBed	intrn	539449	539824	.	-	.	Parent=CGI_10022091;
	scaffold394	TRF	Tandem_Repeat	539449	539824	479	+	.	.
scaffold394	subtractBed	intrn	539449	540381	.	-	.	Parent=CGI_10022091;
	scaffold394	TRF	Tandem_Repeat	539449	540381	796	+	.	.
scaffold394	subtractBed	intrn	540005	540381	.	-	.	Parent=CGI_10022091;
	scaffold394	TRF	Tandem_Repeat	540005	540381	388	+	.	.
scaffold394	subtractBed	intrn	540077	540381	.	-	.	Parent=CGI_10022091;
	scaffold394	TRF	Tandem_Repeat	540077	540381	396	+	.	.
scaffold394	subtractBed	intrn	542961	543018	.	+	.	Parent=CGI_10022092;
	scaffold394	TRF	Tandem_Repeat	542961	543018	98	+	.	.
scaffold394	subtractBed	intrn	554374	554403	.	+	.	Parent=CGI_10022093;
	scaffold394	WUBlastX	LTR_Gypsy	554161	554403	25	+	.	.
scaffold394	subtractBed	intrn	559402	559449	.	+	.	Parent=CGI_10022093;
	scaffold394	WUBlastX	DNA_hAT-hATw	559240	559449	36	+	.	.
scaffold394	subtractBed	intrn	569312	569912	.	+	.	Parent=CGI_10022094;
	scaffold394	TRF	Tandem_Repeat	569312	569912	844	+	.	.
scaffold394	subtractBed	intrn	584406	586130	.	-	.	Parent=CGI_10022095;
	scaffold394	TRF	Tandem_Repeat	584406	586130	2500	+	.	.
scaffold394	subtractBed	intrn	604827	604868	.	-	.	Parent=CGI_10022096;
	scaffold394	TRF	Tandem_Repeat	604827	604868	59	+	.	.
scaffold394	subtractBed	intrn	605647	606449	.	-	.	Parent=CGI_10022096;
	scaffold394	TRF	Tandem_Repeat	605647	606449	896	+	.	.
scaffold394	subtractBed	intrn	695593	695663	.	+	.	Parent=CGI_10022105;
	scaffold394	TRF	Tandem_Repeat	695593	695663	142	+	.	.
scaffold394	subtractBed	intrn	714005	714156	.	-	.	Parent=CGI_10022107;
	scaffold394	TRF	Tandem_Repeat	714005	714156	160	+	.	.
scaffold394	subtractBed	intrn	714751	714997	.	-	.	Parent=CGI_10022107;
	scaffold394	TRF	Tandem_Repeat	714751	714997	404	+	.	.
scaffold39412	subtractBed	intrn	33629	34428	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	33629	34458	1118	+	.	.
scaffold39412	subtractBed	intrn	33629	34428	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	33629	34458	1139	+	.	.
scaffold39412	subtractBed	intrn	37218	37431	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	37218	37431	268	+	.	.
scaffold39412	subtractBed	intrn	37211	37768	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	37211	37768	644	+	.	.
scaffold39412	subtractBed	intrn	37209	37768	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	37209	37768	666	+	.	.
scaffold39412	subtractBed	intrn	37450	37768	.	+	.	Parent=CGI_10003318;
	scaffold39412	TRF	Tandem_Repeat	37450	37768	475	+	.	.
scaffold39412	subtractBed	intrn	33629	34428	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	33629	34458	1118	+	.	.
scaffold39412	subtractBed	intrn	33629	34428	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	33629	34458	1139	+	.	.
scaffold39412	subtractBed	intrn	37218	37431	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	37218	37431	268	+	.	.
scaffold39412	subtractBed	intrn	37211	37768	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	37211	37768	644	+	.	.
scaffold39412	subtractBed	intrn	37209	37768	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	37209	37768	666	+	.	.
scaffold39412	subtractBed	intrn	37450	37768	.	-	.	Parent=CGI_10003319;
	scaffold39412	TRF	Tandem_Repeat	37450	37768	475	+	.	.
scaffold39412	subtractBed	intrn	47313	47347	.	+	.	Parent=CGI_10003320;
	scaffold39412	TRF	Tandem_Repeat	47313	47347	70	+	.	.
scaffold39412	subtractBed	intrn	47669	47725	.	+	.	Parent=CGI_10003320;
	scaffold39412	TRF	Tandem_Repeat	47669	47725	105	+	.	.
scaffold39412	subtractBed	intrn	65992	66037	.	+	.	Parent=CGI_10003322;
	scaffold39412	TRF	Tandem_Repeat	65992	66037	67	+	.	.
scaffold39464	subtractBed	intrn	19604	19715	.	+	.	Parent=CGI_10003386;
	scaffold39464	TRF	Tandem_Repeat	19604	19715	163	+	.	.
scaffold39464	subtractBed	intrn	39219	39245	.	-	.	Parent=CGI_10003387;
	scaffold39464	TRF	Tandem_Repeat	39219	39245	54	+	.	.
scaffold39464	subtractBed	intrn	37825	38031	.	-	.	Parent=CGI_10003387;
	scaffold39464	WUBlastX	DNA_Sola	37825	38031	101	+	.	.
scaffold39464	subtractBed	intrn	47989	48532	.	-	.	Parent=CGI_10003387;
	scaffold39464	TRF	Tandem_Repeat	47989	48532	822	+	.	.
scaffold39470	subtractBed	intrn	21186	22754	.	-	.	Parent=CGI_10003379;
	scaffold39470	WUBlastX	LTR_Ngaro	21186	22754	783	-	.	.
scaffold39470	subtractBed	intrn	23043	24047	.	-	.	Parent=CGI_10003379;
	scaffold39470	WUBlastX	LTR_Ngaro	23043	24047	24	-	.	.
scaffold39470	subtractBed	intrn	21171	22466	.	-	.	Parent=CGI_10003379;
	scaffold39470	WUBlastX	LTR_Ngaro	21171	22466	948	-	.	.
scaffold39470	subtractBed	intrn	20254	21159	.	-	.	Parent=CGI_10003379;
	scaffold39470	WUBlastX	LTR_Ngaro	20254	21159	320	-	.	.
scaffold39470	subtractBed	intrn	44078	44596	.	+	.	Parent=CGI_10003380;
	scaffold39470	WUBlastX	LINE_L2	44078	44596	49	+	.	.
scaffold39470	subtractBed	intrn	47414	47485	.	+	.	Parent=CGI_10003380;
	scaffold39470	WUBlastX	LINE_DRE	47414	47485	23	+	.	.
scaffold39470	subtractBed	intrn	44219	47458	.	+	.	Parent=CGI_10003380;
	scaffold39470	WUBlastX	LINE_CR1	44219	47458	2057	+	.	.
scaffold39470	subtractBed	intrn	68183	68385	.	+	.	Parent=CGI_10003381;
	scaffold39470	TRF	Tandem_Repeat	68183	68385	138	+	.	.
scaffold39472	subtractBed	intrn	39921	40076	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	39921	40076	32	+	.	.
scaffold39472	subtractBed	intrn	40113	40397	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	40113	40397	154	+	.	.
scaffold39472	subtractBed	intrn	37385	37957	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	37385	37957	54	+	.	.
scaffold39472	subtractBed	intrn	38040	38555	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	38040	38555	320	+	.	.
scaffold39472	subtractBed	intrn	38525	38902	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	38525	38902	186	+	.	.
scaffold39472	subtractBed	intrn	38899	39846	.	+	.	Parent=CGI_10003397;
	scaffold39472	WUBlastX	LTR_DIRS	38899	39846	118	+	.	.
scaffold39472	subtractBed	intrn	44323	44362	.	+	.	Parent=CGI_10003397;
	scaffold39472	TRF	Tandem_Repeat	44323	44362	62	+	.	.
scaffold39472	subtractBed	intrn	44319	44364	.	+	.	Parent=CGI_10003397;
	scaffold39472	TRF	Tandem_Repeat	44319	44364	65	+	.	.
scaffold39472	subtractBed	intrn	53097	53133	.	+	.	Parent=CGI_10003397;
	scaffold39472	TRF	Tandem_Repeat	53097	53133	65	+	.	.
scaffold39472	subtractBed	intrn	53097	53136	.	+	.	Parent=CGI_10003397;
	scaffold39472	TRF	Tandem_Repeat	53097	53136	53	+	.	.
scaffold39476	subtractBed	intrn	50125	50358	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	50125	50358	35	+	.	.
scaffold39476	subtractBed	intrn	50125	50475	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	50125	50475	20	+	.	.
scaffold39476	subtractBed	intrn	49914	50147	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	49914	50147	119	+	.	.
scaffold39476	subtractBed	intrn	49869	50138	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	49869	50138	103	+	.	.
scaffold39476	subtractBed	intrn	49629	50147	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	49629	50147	86	+	.	.
scaffold39476	subtractBed	intrn	49890	50210	.	+	.	Parent=CGI_10002876;
	scaffold39476	WUBlastX	LTR_Gypsy	49890	50210	67	+	.	.
scaffold39482	subtractBed	intrn	3975	6071	.	-	.	Parent=CGI_10003389;
	scaffold39482	WUBlastX	DNA_Zator	3975	6071	1258	+	.	.
scaffold39482	subtractBed	intrn	6965	7123	.	-	.	Parent=CGI_10003389;
	scaffold39482	WUBlastX	DNA_Zator	6965	7123	93	+	.	.
scaffold39482	subtractBed	intrn	7224	7721	.	-	.	Parent=CGI_10003389;
	scaffold39482	WUBlastX	DNA_Zator	7224	7721	139	+	.	.
scaffold395	subtractBed	intrn	85648	87325	.	+	.	Parent=CGI_10013969;
	scaffold395	TRF	Tandem_Repeat	85648	87325	2041	+	.	.
scaffold395	subtractBed	intrn	85648	87371	.	+	.	Parent=CGI_10013969;
	scaffold395	TRF	Tandem_Repeat	85648	87371	2300	+	.	.
scaffold395	subtractBed	intrn	90144	90373	.	+	.	Parent=CGI_10013970;
	scaffold395	TRF	Tandem_Repeat	90144	90373	230	+	.	.
scaffold395	subtractBed	intrn	90132	90382	.	+	.	Parent=CGI_10013970;
	scaffold395	TRF	Tandem_Repeat	90132	90382	274	+	.	.
scaffold395	subtractBed	intrn	99448	99737	.	+	.	Parent=CGI_10013970;
	scaffold395	TRF	Tandem_Repeat	99448	99737	514	+	.	.
scaffold395	subtractBed	intrn	101232	101393	.	+	.	Parent=CGI_10013970;
	scaffold395	TRF	Tandem_Repeat	101232	101393	279	+	.	.
scaffold395	subtractBed	intrn	145101	145149	.	+	.	Parent=CGI_10013973;
	scaffold395	TRF	Tandem_Repeat	145101	145149	89	+	.	.
scaffold395	subtractBed	intrn	156936	157920	.	+	.	Parent=CGI_10013975;
	scaffold395	TRF	Tandem_Repeat	156936	157920	1346	+	.	.
scaffold395	subtractBed	intrn	156936	157920	.	+	.	Parent=CGI_10013975;
	scaffold395	TRF	Tandem_Repeat	156936	157920	1411	+	.	.
scaffold395	subtractBed	intrn	167908	168385	.	+	.	Parent=CGI_10013977;
	scaffold395	TRF	Tandem_Repeat	167908	168385	119	+	.	.
scaffold395	subtractBed	intrn	167979	168385	.	+	.	Parent=CGI_10013977;
	scaffold395	TRF	Tandem_Repeat	167979	168385	454	+	.	.
scaffold395	subtractBed	intrn	168004	168385	.	+	.	Parent=CGI_10013977;
	scaffold395	TRF	Tandem_Repeat	168004	168385	445	+	.	.
scaffold395	subtractBed	intrn	172147	172155	.	+	.	Parent=CGI_10013977;
	scaffold395	WUBlastX	LTR_ERVK	172147	172257	58	+	.	.
scaffold395	subtractBed	intrn	187202	188355	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	187158	188355	2369	+	.	.
scaffold395	subtractBed	intrn	189118	189544	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	189088	189544	709	+	.	.
scaffold395	subtractBed	intrn	189699	189762	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	189699	189762	58	+	.	.
scaffold395	subtractBed	intrn	190459	190604	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	190459	190604	107	+	.	.
scaffold395	subtractBed	intrn	191581	191673	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	191581	191673	107	+	.	.
scaffold395	subtractBed	intrn	192826	193601	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	192826	193601	1160	+	.	.
scaffold395	subtractBed	intrn	200404	201092	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	200404	201092	924	+	.	.
scaffold395	subtractBed	intrn	202780	203084	.	+	.	Parent=CGI_10013978;
	scaffold395	TRF	Tandem_Repeat	202780	203084	583	+	.	.
scaffold395	subtractBed	intrn	214586	214971	.	+	.	Parent=CGI_10013980;
	scaffold395	TRF	Tandem_Repeat	214586	214971	601	+	.	.
scaffold395	subtractBed	intrn	258464	258556	.	-	.	Parent=CGI_10013982;
	scaffold395	TRF	Tandem_Repeat	258464	258556	150	+	.	.
scaffold395	subtractBed	intrn	333936	334175	.	+	.	Parent=CGI_10013986;
	scaffold395	WUBlastX	LINE_RTE-X	333936	334175	45	+	.	.
scaffold39514	subtractBed	intrn	4593	4708	.	+	.	Parent=CGI_10003250;
	scaffold39514	TRF	Tandem_Repeat	4593	4708	130	+	.	.
scaffold39514	subtractBed	intrn	5844	5886	.	+	.	Parent=CGI_10003250;
	scaffold39514	TRF	Tandem_Repeat	5844	5886	86	+	.	.
scaffold39522	subtractBed	intrn	5626	5687	.	+	.	Parent=CGI_10003390;
	scaffold39522	TRF	Tandem_Repeat	5626	5687	106	+	.	.
scaffold39522	subtractBed	intrn	6327	6379	.	+	.	Parent=CGI_10003390;
	scaffold39522	TRF	Tandem_Repeat	6327	6379	106	+	.	.
scaffold39522	subtractBed	intrn	6555	6607	.	+	.	Parent=CGI_10003390;
	scaffold39522	TRF	Tandem_Repeat	6555	6607	106	+	.	.
scaffold39522	subtractBed	intrn	24461	24884	.	+	.	Parent=CGI_10003391;
	scaffold39522	TRF	Tandem_Repeat	24461	24884	679	+	.	.
scaffold39522	subtractBed	intrn	27773	27829	.	+	.	Parent=CGI_10003392;
	scaffold39522	TRF	Tandem_Repeat	27773	27829	51	+	.	.
scaffold39522	subtractBed	intrn	29024	29078	.	+	.	Parent=CGI_10003392;
	scaffold39522	TRF	Tandem_Repeat	29024	29078	51	+	.	.
scaffold39522	subtractBed	intrn	61655	61838	.	+	.	Parent=CGI_10003396;
	scaffold39522	TRF	Tandem_Repeat	61636	61838	381	+	.	.
scaffold39524	subtractBed	intrn	7893	8211	.	-	.	Parent=CGI_10003372;
	scaffold39524	TRF	Tandem_Repeat	7893	8211	392	+	.	.
scaffold39524	subtractBed	intrn	8629	8665	.	-	.	Parent=CGI_10003372;
	scaffold39524	TRF	Tandem_Repeat	8629	8665	74	+	.	.
scaffold39536	subtractBed	intrn	47471	47541	.	-	.	Parent=CGI_10003410;
	scaffold39536	TRF	Tandem_Repeat	47471	47541	61	+	.	.
scaffold39536	subtractBed	intrn	49385	49461	.	-	.	Parent=CGI_10003410;
	scaffold39536	TRF	Tandem_Repeat	49385	49461	131	+	.	.
scaffold39536	subtractBed	intrn	56059	56094	.	-	.	Parent=CGI_10003410;
	scaffold39536	TRF	Tandem_Repeat	56059	56094	63	+	.	.
scaffold39536	subtractBed	intrn	60216	60259	.	-	.	Parent=CGI_10003410;
	scaffold39536	TRF	Tandem_Repeat	60216	60259	88	+	.	.
scaffold39572	subtractBed	intrn	63095	63211	.	-	.	Parent=CGI_10003446;
	scaffold39572	WUBlastX	LINE_RTE-X	63095	63211	32	+	.	.
scaffold39572	subtractBed	intrn	63089	63334	.	-	.	Parent=CGI_10003446;
	scaffold39572	WUBlastX	LINE_RTE-X	63089	63334	28	+	.	.
scaffold39580	subtractBed	intrn	5240	5293	.	-	.	Parent=CGI_10003415;
	scaffold39580	TRF	Tandem_Repeat	5240	5293	90	+	.	.
scaffold39580	subtractBed	intrn	6740	6785	.	-	.	Parent=CGI_10003415;
	scaffold39580	TRF	Tandem_Repeat	6740	6785	92	+	.	.
scaffold39580	subtractBed	intrn	11897	11958	.	-	.	Parent=CGI_10003415;
	scaffold39580	TRF	Tandem_Repeat	11897	11958	81	+	.	.
scaffold39582	subtractBed	intrn	5113	5350	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	5113	5350	194	+	.	.
scaffold39582	subtractBed	intrn	16644	16838	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	16644	16838	238	+	.	.
scaffold39582	subtractBed	intrn	16746	16890	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	16746	16890	200	+	.	.
scaffold39582	subtractBed	intrn	16823	16887	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	16823	16887	70	+	.	.
scaffold39582	subtractBed	intrn	17214	17555	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	17214	17555	347	+	.	.
scaffold39582	subtractBed	intrn	17214	17599	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	17214	17599	336	+	.	.
scaffold39582	subtractBed	intrn	17237	17600	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	17237	17600	364	+	.	.
scaffold39582	subtractBed	intrn	17216	17600	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	17216	17600	271	+	.	.
scaffold39582	subtractBed	intrn	18633	20592	.	+	.	Parent=CGI_10003448;
	scaffold39582	TRF	Tandem_Repeat	18633	20592	1999	+	.	.
scaffold39592	subtractBed	intrn	70502	70541	.	-	.	Parent=CGI_10003436;
	scaffold39592	TRF	Tandem_Repeat	70502	70541	53	+	.	.
scaffold39592	subtractBed	intrn	72281	72309	.	-	.	Parent=CGI_10003436;
	scaffold39592	TRF	Tandem_Repeat	72281	72309	58	+	.	.
scaffold39592	subtractBed	intrn	72309	72351	.	-	.	Parent=CGI_10003436;
	scaffold39592	TRF	Tandem_Repeat	72309	72351	86	+	.	.
scaffold396	subtractBed	intrn	23996	24173	.	-	.	Parent=CGI_10018093;
	scaffold396	TRF	Tandem_Repeat	23996	24173	284	+	.	.
scaffold396	subtractBed	intrn	23997	24173	.	-	.	Parent=CGI_10018093;
	scaffold396	TRF	Tandem_Repeat	23997	24173	354	+	.	.
scaffold396	subtractBed	intrn	65362	65571	.	+	.	Parent=CGI_10018094;
	scaffold396	TRF	Tandem_Repeat	65362	65571	175	+	.	.
scaffold396	subtractBed	intrn	65398	65601	.	+	.	Parent=CGI_10018094;
	scaffold396	TRF	Tandem_Repeat	65398	65601	221	+	.	.
scaffold396	subtractBed	intrn	144704	145048	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	144704	145048	134	-	.	.
scaffold396	subtractBed	intrn	140501	141364	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	140501	141364	364	-	.	.
scaffold396	subtractBed	intrn	143541	143732	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	143541	143732	82	-	.	.
scaffold396	subtractBed	intrn	143749	144321	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	143749	144321	407	-	.	.
scaffold396	subtractBed	intrn	142048	142851	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	142048	142851	247	-	.	.
scaffold396	subtractBed	intrn	143418	143765	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	143418	143765	71	-	.	.
scaffold396	subtractBed	intrn	141886	142620	.	+	.	Parent=CGI_10018099;
	scaffold396	WUBlastX	LTR_Ngaro	141886	142620	359	-	.	.
scaffold396	subtractBed	intrn	207066	207147	.	-	.	Parent=CGI_10018103;
	scaffold396	TRF	Tandem_Repeat	207066	207147	164	+	.	.
scaffold396	subtractBed	intrn	204416	204760	.	-	.	Parent=CGI_10018103;
	scaffold396	WUBlastX	LINE_RTE-X	204416	204760	137	+	.	.
scaffold396	subtractBed	intrn	204431	204700	.	-	.	Parent=CGI_10018103;
	scaffold396	WUBlastX	LINE_RTE-X	204431	204700	169	+	.	.
scaffold396	subtractBed	intrn	204437	204826	.	-	.	Parent=CGI_10018103;
	scaffold396	WUBlastX	LINE_RTE-BovB	204437	204826	36	+	.	.
scaffold396	subtractBed	intrn	204347	204706	.	-	.	Parent=CGI_10018103;
	scaffold396	WUBlastX	LINE_CR1	204347	204706	58	+	.	.
scaffold396	subtractBed	intrn	275023	275533	.	+	.	Parent=CGI_10018109;
	scaffold396	TRF	Tandem_Repeat	275023	275533	905	+	.	.
scaffold396	subtractBed	intrn	321340	321417	.	+	.	Parent=CGI_10018112;
	scaffold396	TRF	Tandem_Repeat	321340	321417	156	+	.	.
scaffold396	subtractBed	intrn	325233	326107	.	+	.	Parent=CGI_10018112;
	scaffold396	TRF	Tandem_Repeat	325233	326107	711	+	.	.
scaffold396	subtractBed	intrn	360454	360513	.	+	.	Parent=CGI_10018113;
	scaffold396	TRF	Tandem_Repeat	360454	360513	84	+	.	.
scaffold396	subtractBed	intrn	381611	381663	.	+	.	Parent=CGI_10018114;
	scaffold396	TRF	Tandem_Repeat	381611	381663	106	+	.	.
scaffold396	subtractBed	intrn	384852	385240	.	+	.	Parent=CGI_10018114;
	scaffold396	TRF	Tandem_Repeat	384852	385240	471	+	.	.
scaffold396	subtractBed	intrn	384830	385240	.	+	.	Parent=CGI_10018114;
	scaffold396	TRF	Tandem_Repeat	384800	385240	496	+	.	.
scaffold396	subtractBed	intrn	385572	385911	.	+	.	Parent=CGI_10018114;
	scaffold396	TRF	Tandem_Repeat	385572	385911	409	+	.	.
scaffold396	subtractBed	intrn	406021	406021	.	+	.	Parent=CGI_10018116;
	scaffold396	WUBlastX	DNA_hAT	406021	407418	213	+	.	.
scaffold396	subtractBed	intrn	431555	431598	.	-	.	Parent=CGI_10018118;
	scaffold396	TRF	Tandem_Repeat	431555	431598	88	+	.	.
scaffold396	subtractBed	intrn	454058	454123	.	+	.	Parent=CGI_10018121;
	scaffold396	TRF	Tandem_Repeat	454058	454123	132	+	.	.
scaffold396	subtractBed	intrn	457614	457663	.	+	.	Parent=CGI_10018121;
	scaffold396	TRF	Tandem_Repeat	457614	457663	75	+	.	.
scaffold396	subtractBed	intrn	462811	462869	.	+	.	Parent=CGI_10018121;
	scaffold396	TRF	Tandem_Repeat	462811	462869	111	+	.	.
scaffold396	subtractBed	intrn	524184	524294	.	-	.	Parent=CGI_10018128;
	scaffold396	TRF	Tandem_Repeat	524184	524294	138	+	.	.
scaffold39600	subtractBed	intrn	9126	9168	.	-	.	Parent=CGI_10003464;
	scaffold39600	TRF	Tandem_Repeat	9126	9168	77	+	.	.
scaffold39600	subtractBed	intrn	9974	10037	.	-	.	Parent=CGI_10003464;
	scaffold39600	TRF	Tandem_Repeat	9974	10037	110	+	.	.
scaffold39600	subtractBed	intrn	12706	12744	.	-	.	Parent=CGI_10003464;
	scaffold39600	TRF	Tandem_Repeat	12706	12744	78	+	.	.
scaffold39600	subtractBed	intrn	64889	64932	.	-	.	Parent=CGI_10003465;
	scaffold39600	TRF	Tandem_Repeat	64889	64932	88	+	.	.
scaffold39600	subtractBed	intrn	65276	65326	.	-	.	Parent=CGI_10003465;
	scaffold39600	TRF	Tandem_Repeat	65276	65326	102	+	.	.
scaffold39600	subtractBed	intrn	68705	69054	.	-	.	Parent=CGI_10003465;
	scaffold39600	TRF	Tandem_Repeat	68705	69054	613	+	.	.
scaffold39640	subtractBed	intrn	51258	51808	.	-	.	Parent=CGI_10003501;
	scaffold39640	WUBlastX	DNA_IS4EU	51245	51808	348	-	.	.
scaffold39642	subtractBed	intrn	13247	13741	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	13247	13741	114	-	.	.
scaffold39642	subtractBed	intrn	12963	13112	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	12732	13112	64	-	.	.
scaffold39642	subtractBed	intrn	13146	13319	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	13146	13319	106	-	.	.
scaffold39642	subtractBed	intrn	13403	13714	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	13403	13714	144	-	.	.
scaffold39642	subtractBed	intrn	13717	14328	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	13717	14328	88	-	.	.
scaffold39642	subtractBed	intrn	14386	15114	.	+	.	Parent=CGI_10003495;
	scaffold39642	WUBlastX	DNA_Maverick	14386	15114	26	-	.	.
scaffold39696	subtractBed	intrn	34137	34993	.	+	.	Parent=CGI_10003523;
	scaffold39696	TRF	Tandem_Repeat	34137	34993	1129	+	.	.
scaffold39696	subtractBed	intrn	32669	33475	.	+	.	Parent=CGI_10003523;
	scaffold39696	TRF	Tandem_Repeat	32669	33475	1181	+	.	.
scaffold39696	subtractBed	intrn	44723	44962	.	+	.	Parent=CGI_10003524;
	scaffold39696	WUBlastX	DNA_TcMar-Fot1	44723	44962	24	-	.	.
scaffold39696	subtractBed	intrn	57821	58492	.	+	.	Parent=CGI_10003524;
	scaffold39696	TRF	Tandem_Repeat	57821	58492	702	+	.	.
scaffold39696	subtractBed	intrn	56512	56622	.	+	.	Parent=CGI_10003524;
	scaffold39696	WUBlastX	DNA_Harbinger	56512	56622	34	+	.	.
scaffold39712	subtractBed	intrn	31656	31710	.	-	.	Parent=CGI_10003594;
	scaffold39712	TRF	Tandem_Repeat	31656	31710	110	+	.	.
scaffold39720	subtractBed	intrn	20610	20662	.	+	.	Parent=CGI_10003514;
	scaffold39720	TRF	Tandem_Repeat	20610	20662	97	+	.	.
scaffold39724	subtractBed	intrn	11867	11902	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	11867	11902	72	+	.	.
scaffold39724	subtractBed	intrn	17836	17887	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	17836	17887	104	+	.	.
scaffold39724	subtractBed	intrn	26678	27074	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	26678	27074	569	+	.	.
scaffold39724	subtractBed	intrn	27082	27439	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	27082	27439	431	+	.	.
scaffold39724	subtractBed	intrn	27105	27498	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	27105	27498	286	+	.	.
scaffold39724	subtractBed	intrn	27082	27498	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	27082	27498	428	+	.	.
scaffold39724	subtractBed	intrn	27191	27492	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	27191	27492	253	+	.	.
scaffold39724	subtractBed	intrn	30617	30817	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	30617	30817	101	+	.	.
scaffold39724	subtractBed	intrn	30599	30854	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	30599	30854	307	+	.	.
scaffold39724	subtractBed	intrn	28094	28858	.	+	.	Parent=CGI_10003578;
	scaffold39724	WUBlastX	RC_Helitron	28094	28858	216	+	.	.
scaffold39724	subtractBed	intrn	28931	30577	.	+	.	Parent=CGI_10003578;
	scaffold39724	WUBlastX	RC_Helitron	28931	30577	496	+	.	.
scaffold39724	subtractBed	intrn	27755	28681	.	+	.	Parent=CGI_10003578;
	scaffold39724	WUBlastX	RC_Helitron	27755	28681	271	+	.	.
scaffold39724	subtractBed	intrn	36867	36911	.	+	.	Parent=CGI_10003578;
	scaffold39724	TRF	Tandem_Repeat	36867	36911	83	+	.	.
scaffold39724	subtractBed	intrn	30866	36187	.	+	.	Parent=CGI_10003578;
	scaffold39724	WUBlastX	RC_Helitron	30866	36187	3161	+	.	.
scaffold39724	subtractBed	intrn	62314	62368	.	+	.	Parent=CGI_10003581;
	scaffold39724	TRF	Tandem_Repeat	62314	62368	65	+	.	.
scaffold39724	subtractBed	intrn	62310	62365	.	+	.	Parent=CGI_10003581;
	scaffold39724	TRF	Tandem_Repeat	62310	62365	71	+	.	.
scaffold39724	subtractBed	intrn	65508	65573	.	+	.	Parent=CGI_10003581;
	scaffold39724	TRF	Tandem_Repeat	65508	65573	114	+	.	.
scaffold39730	subtractBed	intrn	4039	4072	.	-	.	Parent=CGI_10003588;
	scaffold39730	TRF	Tandem_Repeat	4039	4072	68	+	.	.
scaffold39730	subtractBed	intrn	10519	10575	.	-	.	Parent=CGI_10003588;
	scaffold39730	TRF	Tandem_Repeat	10519	10575	114	+	.	.
scaffold39730	subtractBed	intrn	10647	10691	.	-	.	Parent=CGI_10003588;
	scaffold39730	TRF	Tandem_Repeat	10647	10691	90	+	.	.
scaffold39730	subtractBed	intrn	16544	16909	.	-	.	Parent=CGI_10003588;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	16544	16909	68	+	.	.
scaffold39730	subtractBed	intrn	17258	17419	.	-	.	Parent=CGI_10003588;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	17258	17419	48	+	.	.
scaffold39730	subtractBed	intrn	16649	16900	.	-	.	Parent=CGI_10003588;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	16649	16900	90	+	.	.
scaffold39730	subtractBed	intrn	18901	18945	.	-	.	Parent=CGI_10003588;
	scaffold39730	TRF	Tandem_Repeat	18901	18945	81	+	.	.
scaffold39730	subtractBed	intrn	16544	16909	.	+	.	Parent=CGI_10003589;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	16544	16909	68	+	.	.
scaffold39730	subtractBed	intrn	17258	17419	.	+	.	Parent=CGI_10003589;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	17258	17419	48	+	.	.
scaffold39730	subtractBed	intrn	16649	16900	.	+	.	Parent=CGI_10003589;
	scaffold39730	WUBlastX	DNA_TcMar-Marin	16649	16900	90	+	.	.
scaffold39730	subtractBed	intrn	18901	18945	.	+	.	Parent=CGI_10003589;
	scaffold39730	TRF	Tandem_Repeat	18901	18945	81	+	.	.
scaffold39730	subtractBed	intrn	41369	42292	.	+	.	Parent=CGI_10003591;
	scaffold39730	TRF	Tandem_Repeat	41369	42292	1201	+	.	.
scaffold39730	subtractBed	intrn	43244	43346	.	+	.	Parent=CGI_10003591;
	scaffold39730	TRF	Tandem_Repeat	43244	43346	89	+	.	.
scaffold39744	subtractBed	intrn	12264	12584	.	-	.	Parent=CGI_10003601;
	scaffold39744	TRF	Tandem_Repeat	12264	12584	498	+	.	.
scaffold39744	subtractBed	intrn	36257	37038	.	+	.	Parent=CGI_10003603;
	scaffold39744	TRF	Tandem_Repeat	36257	37038	618	+	.	.
scaffold39744	subtractBed	intrn	36199	37020	.	+	.	Parent=CGI_10003603;
	scaffold39744	TRF	Tandem_Repeat	36199	37020	932	+	.	.
scaffold39744	subtractBed	intrn	40137	40180	.	+	.	Parent=CGI_10003603;
	scaffold39744	TRF	Tandem_Repeat	40137	40180	79	+	.	.
scaffold39744	subtractBed	intrn	40292	41039	.	+	.	Parent=CGI_10003603;
	scaffold39744	TRF	Tandem_Repeat	40292	41039	1013	+	.	.
scaffold39744	subtractBed	intrn	53585	54574	.	-	.	Parent=CGI_10003604;
	scaffold39744	TRF	Tandem_Repeat	53585	54574	928	+	.	.
scaffold39744	subtractBed	intrn	63043	63284	.	+	.	Parent=CGI_10003605;
	scaffold39744	TRF	Tandem_Repeat	63043	63284	308	+	.	.
scaffold39744	subtractBed	intrn	64885	65083	.	+	.	Parent=CGI_10003605;
	scaffold39744	TRF	Tandem_Repeat	64885	65083	291	+	.	.
scaffold39744	subtractBed	intrn	76284	76404	.	+	.	Parent=CGI_10003605;
	scaffold39744	TRF	Tandem_Repeat	76284	76404	134	+	.	.
scaffold39754	subtractBed	intrn	12544	12799	.	+	.	Parent=CGI_10003598;
	scaffold39754	TRF	Tandem_Repeat	12544	12799	224	+	.	.
scaffold39754	subtractBed	intrn	12574	12799	.	+	.	Parent=CGI_10003598;
	scaffold39754	TRF	Tandem_Repeat	12574	12799	267	+	.	.
scaffold39754	subtractBed	intrn	14096	14778	.	+	.	Parent=CGI_10003598;
	scaffold39754	TRF	Tandem_Repeat	14096	14778	1096	+	.	.
scaffold39754	subtractBed	intrn	12858	14069	.	+	.	Parent=CGI_10003598;
	scaffold39754	WUBlastX	LTR_Pao	12858	14069	700	+	.	.
scaffold39754	subtractBed	intrn	12162	12515	.	+	.	Parent=CGI_10003598;
	scaffold39754	WUBlastX	LTR_Pao	12162	12515	54	+	.	.
scaffold39754	subtractBed	intrn	69917	69950	.	+	.	Parent=CGI_10003600;
	scaffold39754	TRF	Tandem_Repeat	69917	69950	68	+	.	.
scaffold39758	subtractBed	intrn	22237	22599	.	+	.	Parent=CGI_10003537;
	scaffold39758	WUBlastX	DNA_Kolobok	22237	22599	122	+	.	.
scaffold39758	subtractBed	intrn	28249	29466	.	+	.	Parent=CGI_10003538;
	scaffold39758	TRF	Tandem_Repeat	28249	29466	1408	+	.	.
scaffold39758	subtractBed	intrn	35417	35458	.	+	.	Parent=CGI_10003538;
	scaffold39758	TRF	Tandem_Repeat	35417	35458	50	+	.	.
scaffold39758	subtractBed	intrn	54928	54985	.	+	.	Parent=CGI_10003539;
	scaffold39758	TRF	Tandem_Repeat	54928	54985	53	+	.	.
scaffold39758	subtractBed	intrn	55543	55776	.	+	.	Parent=CGI_10003539;
	scaffold39758	TRF	Tandem_Repeat	55543	55776	336	+	.	.
scaffold39758	subtractBed	intrn	61591	61929	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	61591	61929	103	-	.	.
scaffold39758	subtractBed	intrn	61564	61815	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	61564	61815	174	-	.	.
scaffold39758	subtractBed	intrn	61893	62288	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	61893	62288	136	-	.	.
scaffold39758	subtractBed	intrn	59680	60216	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	59680	60216	89	-	.	.
scaffold39758	subtractBed	intrn	62980	63174	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	62980	63174	31	-	.	.
scaffold39758	subtractBed	intrn	59772	60683	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	59772	60683	303	-	.	.
scaffold39758	subtractBed	intrn	62305	62484	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	62305	62484	131	-	.	.
scaffold39758	subtractBed	intrn	62484	62645	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	62484	62645	103	-	.	.
scaffold39758	subtractBed	intrn	62903	63028	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	62903	63028	29	-	.	.
scaffold39758	subtractBed	intrn	63046	63252	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	63046	63252	37	-	.	.
scaffold39758	subtractBed	intrn	60507	60746	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	60507	60746	81	-	.	.
scaffold39758	subtractBed	intrn	63049	63354	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	63049	63354	36	-	.	.
scaffold39758	subtractBed	intrn	63049	63201	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-BovB	63049	63201	71	-	.	.
scaffold39758	subtractBed	intrn	62211	62309	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_CR1	62211	62309	24	-	.	.
scaffold39758	subtractBed	intrn	60507	60794	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_L1	60507	60794	29	-	.	.
scaffold39758	subtractBed	intrn	61393	61785	.	+	.	Parent=CGI_10003539;
	scaffold39758	WUBlastX	LINE_RTE-X	61393	61785	40	-	.	.
scaffold39778	subtractBed	intrn	37087	37365	.	+	.	Parent=CGI_10003608;
	scaffold39778	TRF	Tandem_Repeat	37087	37365	444	+	.	.
scaffold39778	subtractBed	intrn	42275	42427	.	+	.	Parent=CGI_10003608;
	scaffold39778	TRF	Tandem_Repeat	42275	42427	105	+	.	.
scaffold39778	subtractBed	intrn	43460	43759	.	+	.	Parent=CGI_10003608;
	scaffold39778	WUBlastX	LINE_RTE-X	43460	43759	70	+	.	.
scaffold39778	subtractBed	intrn	43475	43642	.	+	.	Parent=CGI_10003608;
	scaffold39778	WUBlastX	LINE_RTE-X	43475	43642	88	+	.	.
scaffold39778	subtractBed	intrn	42561	43463	.	+	.	Parent=CGI_10003608;
	scaffold39778	WUBlastX	LINE_RTE-X	42561	43463	451	+	.	.
scaffold39778	subtractBed	intrn	60178	60357	.	-	.	Parent=CGI_10003612;
	scaffold39778	TRF	Tandem_Repeat	60178	60357	360	+	.	.
scaffold39778	subtractBed	intrn	62794	63021	.	-	.	Parent=CGI_10003612;
	scaffold39778	WUBlastX	LINE_RTE-X	62794	63021	69	-	.	.
scaffold39778	subtractBed	intrn	62638	62955	.	-	.	Parent=CGI_10003612;
	scaffold39778	WUBlastX	LINE_RTE-X	62638	62955	73	-	.	.
scaffold39778	subtractBed	intrn	63912	63956	.	-	.	Parent=CGI_10003612;
	scaffold39778	TRF	Tandem_Repeat	63912	63956	90	+	.	.
scaffold39778	subtractBed	intrn	64638	65054	.	-	.	Parent=CGI_10003612;
	scaffold39778	TRF	Tandem_Repeat	64638	65054	422	+	.	.
scaffold39778	subtractBed	intrn	66878	66935	.	-	.	Parent=CGI_10003612;
	scaffold39778	TRF	Tandem_Repeat	66878	66935	116	+	.	.
scaffold39778	subtractBed	intrn	72746	72784	.	-	.	Parent=CGI_10003613;
	scaffold39778	TRF	Tandem_Repeat	72746	72784	78	+	.	.
scaffold398	subtractBed	intrn	3457	3918	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_CR1-L2	3457	3918	156	-	.	.
scaffold398	subtractBed	intrn	4743	4859	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_L1	4743	4859	22	-	.	.
scaffold398	subtractBed	intrn	4231	4593	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_CR1	4231	4593	83	-	.	.
scaffold398	subtractBed	intrn	3466	4479	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_Jockey	3466	4479	128	-	.	.
scaffold398	subtractBed	intrn	2887	3078	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_Jockey	2887	3078	21	-	.	.
scaffold398	subtractBed	intrn	4767	4877	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_L2	4767	4877	20	-	.	.
scaffold398	subtractBed	intrn	4231	4722	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_CR1	4231	4722	31	-	.	.
scaffold398	subtractBed	intrn	4764	4853	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_L2	4764	4853	27	-	.	.
scaffold398	subtractBed	intrn	3274	3912	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_L1	3274	3912	53	-	.	.
scaffold398	subtractBed	intrn	2935	4602	.	+	.	Parent=CGI_10004360;
	scaffold398	WUBlastX	LINE_L2-Hydra	2935	4602	46	-	.	.
scaffold398	subtractBed	intrn	43468	43722	.	+	.	Parent=CGI_10004361;
	scaffold398	WUBlastX	LINE_RTE-X	43468	43722	106	-	.	.
scaffold398	subtractBed	intrn	43441	43765	.	+	.	Parent=CGI_10004361;
	scaffold398	WUBlastX	LINE_RTE-X	43441	43779	63	-	.	.
scaffold398	subtractBed	intrn	43372	43683	.	+	.	Parent=CGI_10004361;
	scaffold398	WUBlastX	LINE_RTE-X	43372	43683	111	-	.	.
scaffold398	subtractBed	intrn	46561	46635	.	+	.	Parent=CGI_10004361;
	scaffold398	TRF	Tandem_Repeat	46561	46635	143	+	.	.
scaffold398	subtractBed	intrn	75993	76032	.	+	.	Parent=CGI_10004362;
	scaffold398	TRF	Tandem_Repeat	75993	76032	80	+	.	.
scaffold398	subtractBed	intrn	81221	81281	.	+	.	Parent=CGI_10004362;
	scaffold398	TRF	Tandem_Repeat	81221	81281	77	+	.	.
scaffold398	subtractBed	intrn	85754	85805	.	+	.	Parent=CGI_10004363;
	scaffold398	TRF	Tandem_Repeat	85754	85805	50	+	.	.
scaffold398	subtractBed	intrn	85974	87328	.	+	.	Parent=CGI_10004363;
	scaffold398	TRF	Tandem_Repeat	85974	87328	1564	+	.	.
scaffold398	subtractBed	intrn	91580	91736	.	-	.	Parent=CGI_10004364;
	scaffold398	TRF	Tandem_Repeat	91580	91736	172	+	.	.
scaffold398	subtractBed	intrn	95675	95733	.	-	.	Parent=CGI_10004364;
	scaffold398	TRF	Tandem_Repeat	95675	95733	118	+	.	.
scaffold39804	subtractBed	intrn	17692	17949	.	+	.	Parent=CGI_10003618;
	scaffold39804	WUBlastX	LINE_L1-Tx1	17692	17949	44	-	.	.
scaffold39804	subtractBed	intrn	17767	18012	.	+	.	Parent=CGI_10003618;
	scaffold39804	WUBlastX	LINE_L1-Tx1	17767	18012	67	-	.	.
scaffold39804	subtractBed	intrn	17752	17973	.	+	.	Parent=CGI_10003618;
	scaffold39804	WUBlastX	LINE_L1-Tx1	17752	17973	69	-	.	.
scaffold39804	subtractBed	intrn	18330	18596	.	+	.	Parent=CGI_10003618;
	scaffold39804	WUBlastX	LINE_L1-Tx1	18330	18596	50	-	.	.
scaffold39804	subtractBed	intrn	34287	34321	.	+	.	Parent=CGI_10003619;
	scaffold39804	TRF	Tandem_Repeat	34287	34321	52	+	.	.
scaffold39804	subtractBed	intrn	34286	34337	.	+	.	Parent=CGI_10003619;
	scaffold39804	TRF	Tandem_Repeat	34286	34337	50	+	.	.
scaffold39804	subtractBed	intrn	34286	34338	.	+	.	Parent=CGI_10003619;
	scaffold39804	TRF	Tandem_Repeat	34286	34338	70	+	.	.
scaffold39804	subtractBed	intrn	54167	54457	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_RTE-X	54167	54457	108	-	.	.
scaffold39804	subtractBed	intrn	54761	55000	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_L2	54761	55000	41	-	.	.
scaffold39804	subtractBed	intrn	54071	54382	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_RTE-BovB	54071	54382	60	-	.	.
scaffold39804	subtractBed	intrn	53835	54164	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_CR1	53835	54164	28	-	.	.
scaffold39804	subtractBed	intrn	54137	54493	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_CR1-L2	54137	54493	79	-	.	.
scaffold39804	subtractBed	intrn	54737	54910	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_L2	54737	54910	61	-	.	.
scaffold39804	subtractBed	intrn	53881	54027	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_Jockey	53881	54027	34	-	.	.
scaffold39804	subtractBed	intrn	52207	52539	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_RTE-BovB	52207	52539	64	-	.	.
scaffold39804	subtractBed	intrn	52276	52467	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_RTE-BovB	52276	52467	71	-	.	.
scaffold39804	subtractBed	intrn	54692	54913	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_L2	54692	54913	50	-	.	.
scaffold39804	subtractBed	intrn	54563	54910	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_Jockey	54563	54910	25	-	.	.
scaffold39804	subtractBed	intrn	53766	53882	.	-	.	Parent=CGI_10003620;
	scaffold39804	WUBlastX	LINE_L2	53766	53882	20	-	.	.
scaffold39804	subtractBed	intrn	67160	67207	.	-	.	Parent=CGI_10003622;
	scaffold39804	TRF	Tandem_Repeat	67160	67207	64	+	.	.
scaffold39858	subtractBed	intrn	10445	10454	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	10445	10579	54	-	.	.
scaffold39858	subtractBed	intrn	10366	10421	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	10212	10421	92	-	.	.
scaffold39858	subtractBed	intrn	10708	10965	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	10708	10965	109	-	.	.
scaffold39858	subtractBed	intrn	11046	11047	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11046	11237	96	-	.	.
scaffold39858	subtractBed	intrn	11040	11047	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11040	11279	60	-	.	.
scaffold39858	subtractBed	intrn	11319	11321	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11319	11480	102	-	.	.
scaffold39858	subtractBed	intrn	11319	11321	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11319	11447	104	-	.	.
scaffold39858	subtractBed	intrn	11235	11237	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11046	11237	96	-	.	.
scaffold39858	subtractBed	intrn	11235	11279	.	-	.	Parent=CGI_10003659;
	scaffold39858	WUBlastX	DNA_Kolobok	11040	11279	60	-	.	.
scaffold39858	subtractBed	intrn	71159	71331	.	+	.	Parent=CGI_10003660;
	scaffold39858	TRF	Tandem_Repeat	71159	71331	301	+	.	.
scaffold39858	subtractBed	intrn	71531	71883	.	+	.	Parent=CGI_10003660;
	scaffold39858	TRF	Tandem_Repeat	71531	71883	260	+	.	.
scaffold39858	subtractBed	intrn	72154	72459	.	+	.	Parent=CGI_10003660;
	scaffold39858	WUBlastX	LTR_Pao	72154	72459	286	-	.	.
scaffold39858	subtractBed	intrn	73353	73451	.	+	.	Parent=CGI_10003660;
	scaffold39858	WUBlastX	LTR_Pao	73353	73451	21	-	.	.
scaffold39858	subtractBed	intrn	72154	72552	.	+	.	Parent=CGI_10003660;
	scaffold39858	WUBlastX	LTR_Pao	72154	72552	94	-	.	.
scaffold39880	subtractBed	intrn	12870	12998	.	-	.	Parent=CGI_10003671;
	scaffold39880	TRF	Tandem_Repeat	12870	12998	80	+	.	.
scaffold39880	subtractBed	intrn	64421	64487	.	+	.	Parent=CGI_10003672;
	scaffold39880	TRF	Tandem_Repeat	64421	64487	80	+	.	.
scaffold39880	subtractBed	intrn	67472	67509	.	+	.	Parent=CGI_10003672;
	scaffold39880	TRF	Tandem_Repeat	67472	67509	58	+	.	.
scaffold39880	subtractBed	intrn	71140	71178	.	+	.	Parent=CGI_10003672;
	scaffold39880	TRF	Tandem_Repeat	71140	71178	78	+	.	.
scaffold399	subtractBed	intrn	3157	3283	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	3157	3283	188	+	.	.
scaffold399	subtractBed	intrn	16426	16464	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	16426	16464	69	+	.	.
scaffold399	subtractBed	intrn	16377	16428	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	16377	16428	104	+	.	.
scaffold399	subtractBed	intrn	20655	21756	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	20655	21756	1246	+	.	.
scaffold399	subtractBed	intrn	21925	21967	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	21925	21967	59	+	.	.
scaffold399	subtractBed	intrn	32034	32087	.	+	.	Parent=CGI_10009280;
	scaffold399	TRF	Tandem_Repeat	32034	32087	99	+	.	.
scaffold399	subtractBed	intrn	37748	37823	.	+	.	Parent=CGI_10009281;
	scaffold399	TRF	Tandem_Repeat	37748	37823	145	+	.	.
scaffold399	subtractBed	intrn	46365	46406	.	+	.	Parent=CGI_10009281;
	scaffold399	TRF	Tandem_Repeat	46365	46406	50	+	.	.
scaffold399	subtractBed	intrn	51376	51426	.	+	.	Parent=CGI_10009281;
	scaffold399	TRF	Tandem_Repeat	51376	51426	102	+	.	.
scaffold399	subtractBed	intrn	51520	52211	.	+	.	Parent=CGI_10009281;
	scaffold399	TRF	Tandem_Repeat	51520	52211	1002	+	.	.
scaffold399	subtractBed	intrn	70067	70135	.	+	.	Parent=CGI_10009282;
	scaffold399	TRF	Tandem_Repeat	70067	70135	86	+	.	.
scaffold399	subtractBed	intrn	72689	72720	.	+	.	Parent=CGI_10009283;
	scaffold399	TRF	Tandem_Repeat	72689	72720	57	+	.	.
scaffold399	subtractBed	intrn	72966	73000	.	+	.	Parent=CGI_10009283;
	scaffold399	TRF	Tandem_Repeat	72966	73000	52	+	.	.
scaffold399	subtractBed	intrn	73014	73664	.	+	.	Parent=CGI_10009283;
	scaffold399	TRF	Tandem_Repeat	73014	73664	856	+	.	.
scaffold399	subtractBed	intrn	106899	107095	.	-	.	Parent=CGI_10009285;
	scaffold399	TRF	Tandem_Repeat	106899	107095	286	+	.	.
scaffold399	subtractBed	intrn	115252	115277	.	-	.	Parent=CGI_10009285;
	scaffold399	TRF	Tandem_Repeat	115252	115277	52	+	.	.
scaffold399	subtractBed	intrn	115797	115854	.	-	.	Parent=CGI_10009285;
	scaffold399	TRF	Tandem_Repeat	115797	115854	116	+	.	.
scaffold399	subtractBed	intrn	125995	126031	.	+	.	Parent=CGI_10009286;
	scaffold399	TRF	Tandem_Repeat	125995	126031	74	+	.	.
scaffold399	subtractBed	intrn	171380	171430	.	+	.	Parent=CGI_10009287;
	scaffold399	TRF	Tandem_Repeat	171380	171430	57	+	.	.
scaffold399	subtractBed	intrn	171384	171466	.	+	.	Parent=CGI_10009287;
	scaffold399	TRF	Tandem_Repeat	171384	171466	67	+	.	.
scaffold399	subtractBed	intrn	171428	171476	.	+	.	Parent=CGI_10009287;
	scaffold399	TRF	Tandem_Repeat	171428	171476	98	+	.	.
scaffold39900	subtractBed	intrn	65377	65436	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	65377	65436	31	+	.	.
scaffold39900	subtractBed	intrn	64855	65370	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	64855	65370	162	+	.	.
scaffold39900	subtractBed	intrn	64804	65271	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	64804	65271	287	+	.	.
scaffold39900	subtractBed	intrn	65392	65436	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	65392	65436	33	+	.	.
scaffold39900	subtractBed	intrn	67240	67286	.	+	.	Parent=CGI_10003685;
	scaffold39900	TRF	Tandem_Repeat	67240	67286	53	+	.	.
scaffold39900	subtractBed	intrn	69640	70800	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	69640	70800	191	-	.	.
scaffold39900	subtractBed	intrn	67619	69724	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	67619	69724	1279	-	.	.
scaffold39900	subtractBed	intrn	69640	70179	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	69640	70179	369	-	.	.
scaffold39900	subtractBed	intrn	66223	66678	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	66223	66678	173	+	.	.
scaffold39900	subtractBed	intrn	70836	71288	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	70836	71288	110	-	.	.
scaffold39900	subtractBed	intrn	65436	66224	.	+	.	Parent=CGI_10003685;
	scaffold39900	WUBlastX	DNA_Maverick	65436	66224	433	+	.	.
scaffold39958	subtractBed	intrn	11817	11853	.	+	.	Parent=CGI_10003716;
	scaffold39958	TRF	Tandem_Repeat	11817	11853	74	+	.	.
scaffold39958	subtractBed	intrn	12156	12182	.	+	.	Parent=CGI_10003716;
	scaffold39958	TRF	Tandem_Repeat	12156	12182	54	+	.	.
scaffold39958	subtractBed	intrn	20249	20331	.	+	.	Parent=CGI_10003717;
	scaffold39958	TRF	Tandem_Repeat	20249	20331	112	+	.	.
scaffold39958	subtractBed	intrn	56411	56549	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	56411	56549	144	+	.	.
scaffold39958	subtractBed	intrn	57185	57386	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	57185	57386	170	+	.	.
scaffold39958	subtractBed	intrn	57214	57380	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	57214	57380	160	+	.	.
scaffold39958	subtractBed	intrn	57193	57624	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	57193	57624	428	+	.	.
scaffold39958	subtractBed	intrn	57449	57622	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	57449	57622	168	+	.	.
scaffold39958	subtractBed	intrn	63908	63955	.	+	.	Parent=CGI_10003718;
	scaffold39958	TRF	Tandem_Repeat	63908	63955	96	+	.	.
scaffold39960	subtractBed	intrn	42508	42552	.	+	.	Parent=CGI_10003755;
	scaffold39960	TRF	Tandem_Repeat	42508	42552	81	+	.	.
scaffold39960	subtractBed	intrn	42809	43474	.	+	.	Parent=CGI_10003755;
	scaffold39960	TRF	Tandem_Repeat	42809	43474	1059	+	.	.
scaffold39960	subtractBed	intrn	44659	44688	.	+	.	Parent=CGI_10003755;
	scaffold39960	TRF	Tandem_Repeat	44659	44688	60	+	.	.
scaffold39960	subtractBed	intrn	62168	62299	.	+	.	Parent=CGI_10003758;
	scaffold39960	TRF	Tandem_Repeat	62168	62299	52	+	.	.
scaffold39960	subtractBed	intrn	62226	62376	.	+	.	Parent=CGI_10003758;
	scaffold39960	TRF	Tandem_Repeat	62226	62376	74	+	.	.
scaffold39966	subtractBed	intrn	8979	9344	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	8979	9344	187	+	.	.
scaffold39966	subtractBed	intrn	9346	10857	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	9346	10857	484	+	.	.
scaffold39966	subtractBed	intrn	10875	11567	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	10875	11567	499	+	.	.
scaffold39966	subtractBed	intrn	11591	12058	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	11591	12058	85	+	.	.
scaffold39966	subtractBed	intrn	11591	11959	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	11591	11959	223	+	.	.
scaffold39966	subtractBed	intrn	7739	8734	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	DNA_Zator	7739	8734	131	+	.	.
scaffold39966	subtractBed	intrn	10854	10925	.	+	.	Parent=CGI_10003724;
	scaffold39966	WUBlastX	LTR_Gypsy	10854	10925	20	+	.	.
scaffold39966	subtractBed	intrn	17836	17869	.	+	.	Parent=CGI_10003724;
	scaffold39966	TRF	Tandem_Repeat	17836	17869	59	+	.	.
scaffold39966	subtractBed	intrn	18505	18534	.	+	.	Parent=CGI_10003724;
	scaffold39966	TRF	Tandem_Repeat	18505	18534	60	+	.	.
scaffold39972	subtractBed	intrn	41384	41911	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1	41384	41911	93	+	.	.
scaffold39972	subtractBed	intrn	41235	41378	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1-Tx1	41235	41378	68	+	.	.
scaffold39972	subtractBed	intrn	41405	41797	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1-Tx1	41405	41797	173	+	.	.
scaffold39972	subtractBed	intrn	40444	41259	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1	40444	41259	409	+	.	.
scaffold39972	subtractBed	intrn	42046	42297	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1	42046	42297	29	+	.	.
scaffold39972	subtractBed	intrn	41324	41785	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_L1	41324	41785	116	+	.	.
scaffold39972	subtractBed	intrn	39460	39948	.	+	.	Parent=CGI_10003708;
	scaffold39972	WUBlastX	LINE_RTE-X	39460	39948	38	+	.	.
scaffold39972	subtractBed	intrn	49856	49901	.	+	.	Parent=CGI_10003709;
	scaffold39972	TRF	Tandem_Repeat	49856	49901	92	+	.	.
scaffold39972	subtractBed	intrn	52567	52959	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	52567	52959	194	-	.	.
scaffold39972	subtractBed	intrn	53536	53775	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	53536	53775	155	-	.	.
scaffold39972	subtractBed	intrn	53422	53775	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	53422	53775	67	-	.	.
scaffold39972	subtractBed	intrn	53282	53539	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	53282	53539	49	-	.	.
scaffold39972	subtractBed	intrn	52459	52974	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	52459	52974	188	-	.	.
scaffold39972	subtractBed	intrn	53067	53375	.	+	.	Parent=CGI_10003709;
	scaffold39972	WUBlastX	LTR_Gypsy	53067	53375	39	-	.	.
scaffold39974	subtractBed	intrn	69202	69807	.	+	.	Parent=CGI_10003760;
	scaffold39974	WUBlastX	LTR_Ngaro	69202	69807	106	+	.	.
scaffold39974	subtractBed	intrn	69863	70363	.	+	.	Parent=CGI_10003760;
	scaffold39974	WUBlastX	LTR_Ngaro	69863	70363	346	+	.	.
scaffold39974	subtractBed	intrn	69172	69630	.	+	.	Parent=CGI_10003760;
	scaffold39974	WUBlastX	LTR_Ngaro	69172	69630	149	+	.	.
scaffold39974	subtractBed	intrn	68959	69642	.	+	.	Parent=CGI_10003760;
	scaffold39974	WUBlastX	LTR_Ngaro	68959	69642	147	+	.	.
scaffold39974	subtractBed	intrn	67984	67989	.	+	.	Parent=CGI_10003760;
	scaffold39974	WUBlastX	LINE_RTE-X	67579	67989	49	+	.	.
scaffold39976	subtractBed	intrn	61074	62582	.	-	.	Parent=CGI_10003749;
	scaffold39976	TRF	Tandem_Repeat	61074	62582	1798	+	.	.
scaffold39976	subtractBed	intrn	61073	62582	.	-	.	Parent=CGI_10003749;
	scaffold39976	TRF	Tandem_Repeat	61073	62582	1824	+	.	.
scaffold39976	subtractBed	intrn	78238	78271	.	-	.	Parent=CGI_10003749;
	scaffold39976	TRF	Tandem_Repeat	78238	78271	52	+	.	.
scaffold39998	subtractBed	intrn	47610	47658	.	+	.	Parent=CGI_10003751;
	scaffold39998	TRF	Tandem_Repeat	47610	47658	82	+	.	.
scaffold39998	subtractBed	intrn	51816	51873	.	+	.	Parent=CGI_10003751;
	scaffold39998	TRF	Tandem_Repeat	51816	51873	116	+	.	.
scaffold39998	subtractBed	intrn	52904	53083	.	+	.	Parent=CGI_10003751;
	scaffold39998	TRF	Tandem_Repeat	52904	53083	351	+	.	.
scaffold39998	subtractBed	intrn	59081	59138	.	+	.	Parent=CGI_10003752;
	scaffold39998	TRF	Tandem_Repeat	59081	59138	109	+	.	.
scaffold39998	subtractBed	intrn	70201	70251	.	+	.	Parent=CGI_10003752;
	scaffold39998	TRF	Tandem_Repeat	70201	70251	66	+	.	.
scaffold4	subtractBed	intrn	48228	48368	.	+	.	Parent=CGI_10021161;
	scaffold4	WUBlastX	LINE_RTE-X	48228	48368	67	+	.	.
scaffold4	subtractBed	intrn	50383	50425	.	+	.	Parent=CGI_10021161;
	scaffold4	TRF	Tandem_Repeat	50383	50425	86	+	.	.
scaffold4	subtractBed	intrn	53470	53664	.	+	.	Parent=CGI_10021161;
	scaffold4	WUBlastX	LINE_RTE-X	53470	53664	37	-	.	.
scaffold4	subtractBed	intrn	48998	49158	.	+	.	Parent=CGI_10021161;
	scaffold4	TRF	Tandem_Repeat	48998	49158	126	+	.	.
scaffold4	subtractBed	intrn	68360	68503	.	+	.	Parent=CGI_10021163;
	scaffold4	TRF	Tandem_Repeat	68360	68503	130	+	.	.
scaffold4	subtractBed	intrn	68379	68521	.	+	.	Parent=CGI_10021163;
	scaffold4	TRF	Tandem_Repeat	68379	68521	105	+	.	.
scaffold4	subtractBed	intrn	75720	76400	.	+	.	Parent=CGI_10021163;
	scaffold4	TRF	Tandem_Repeat	75691	76400	1197	+	.	.
scaffold4	subtractBed	intrn	76734	76825	.	+	.	Parent=CGI_10021163;
	scaffold4	TRF	Tandem_Repeat	76734	76825	96	+	.	.
scaffold4	subtractBed	intrn	76847	77012	.	+	.	Parent=CGI_10021163;
	scaffold4	TRF	Tandem_Repeat	76847	77012	168	+	.	.
scaffold4	subtractBed	intrn	88167	88218	.	-	.	Parent=CGI_10021164;
	scaffold4	TRF	Tandem_Repeat	88167	88218	104	+	.	.
scaffold4	subtractBed	intrn	138204	138238	.	+	.	Parent=CGI_10021169;
	scaffold4	TRF	Tandem_Repeat	138204	138238	70	+	.	.
scaffold4	subtractBed	intrn	168842	168952	.	-	.	Parent=CGI_10021171;
	scaffold4	TRF	Tandem_Repeat	168842	168952	222	+	.	.
scaffold4	subtractBed	intrn	345488	345531	.	+	.	Parent=CGI_10021174;
	scaffold4	TRF	Tandem_Repeat	345488	345531	56	+	.	.
scaffold4	subtractBed	intrn	346835	347248	.	+	.	Parent=CGI_10021174;
	scaffold4	WUBlastX	LINE_L1-Tx1	346835	347248	24	-	.	.
scaffold4	subtractBed	intrn	347009	347620	.	+	.	Parent=CGI_10021174;
	scaffold4	WUBlastX	LINE_L1-Tx1	347009	347620	68	-	.	.
scaffold4	subtractBed	intrn	347692	349815	.	+	.	Parent=CGI_10021174;
	scaffold4	WUBlastX	LINE_L1-Tx1	347692	349815	809	-	.	.
scaffold4	subtractBed	intrn	378935	379073	.	+	.	Parent=CGI_10021175;
	scaffold4	TRF	Tandem_Repeat	378935	379073	251	+	.	.
scaffold4	subtractBed	intrn	382376	382446	.	+	.	Parent=CGI_10021175;
	scaffold4	TRF	Tandem_Repeat	382376	382446	126	+	.	.
scaffold4	subtractBed	intrn	382376	382446	.	-	.	Parent=CGI_10021176;
	scaffold4	TRF	Tandem_Repeat	382376	382446	126	+	.	.
scaffold4	subtractBed	intrn	386923	386989	.	-	.	Parent=CGI_10021176;
	scaffold4	TRF	Tandem_Repeat	386923	386989	134	+	.	.
scaffold4	subtractBed	intrn	388334	388391	.	-	.	Parent=CGI_10021176;
	scaffold4	TRF	Tandem_Repeat	388334	388391	107	+	.	.
scaffold4	subtractBed	intrn	389119	389200	.	-	.	Parent=CGI_10021176;
	scaffold4	TRF	Tandem_Repeat	389119	389200	164	+	.	.
scaffold4	subtractBed	intrn	400298	400604	.	-	.	Parent=CGI_10021178;
	scaffold4	TRF	Tandem_Repeat	400298	400604	488	+	.	.
scaffold4	subtractBed	intrn	410777	411342	.	-	.	Parent=CGI_10021178;
	scaffold4	TRF	Tandem_Repeat	410777	411342	848	+	.	.
scaffold4	subtractBed	intrn	411848	412130	.	-	.	Parent=CGI_10021178;
	scaffold4	TRF	Tandem_Repeat	411848	412130	487	+	.	.
scaffold4	subtractBed	intrn	412574	412605	.	-	.	Parent=CGI_10021178;
	scaffold4	TRF	Tandem_Repeat	412574	412605	64	+	.	.
scaffold4	subtractBed	intrn	412603	412653	.	-	.	Parent=CGI_10021178;
	scaffold4	TRF	Tandem_Repeat	412603	412653	93	+	.	.
scaffold4	subtractBed	intrn	425754	425787	.	-	.	Parent=CGI_10021179;
	scaffold4	TRF	Tandem_Repeat	425754	425787	59	+	.	.
scaffold4	subtractBed	intrn	435618	435818	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_L1-Tx1	435618	435818	52	+	.	.
scaffold4	subtractBed	intrn	435636	435977	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_L1	435636	435977	36	+	.	.
scaffold4	subtractBed	intrn	435651	435863	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_L1-Tx1	435651	435863	36	+	.	.
scaffold4	subtractBed	intrn	457257	457320	.	-	.	Parent=CGI_10021179;
	scaffold4	TRF	Tandem_Repeat	457257	457320	128	+	.	.
scaffold4	subtractBed	intrn	458306	458347	.	-	.	Parent=CGI_10021179;
	scaffold4	TRF	Tandem_Repeat	458306	458347	84	+	.	.
scaffold4	subtractBed	intrn	459300	459590	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_RTE-X	459300	459590	41	+	.	.
scaffold4	subtractBed	intrn	459288	459482	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_RTE-X	459288	459482	67	+	.	.
scaffold4	subtractBed	intrn	459234	459476	.	-	.	Parent=CGI_10021179;
	scaffold4	WUBlastX	LINE_RTE-X	459234	459476	25	+	.	.
scaffold4	subtractBed	intrn	464006	464087	.	+	.	Parent=CGI_10021180;
	scaffold4	TRF	Tandem_Repeat	464006	464087	71	+	.	.
scaffold4	subtractBed	intrn	473267	473779	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1-Tx1	473267	473779	111	-	.	.
scaffold4	subtractBed	intrn	474860	475048	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	474860	475048	40	-	.	.
scaffold4	subtractBed	intrn	474746	475111	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1-Tx1	474746	475111	25	-	.	.
scaffold4	subtractBed	intrn	474620	474676	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	474620	474676	20	-	.	.
scaffold4	subtractBed	intrn	474827	475012	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	474827	475012	42	-	.	.
scaffold4	subtractBed	intrn	473498	473944	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_Dong-R4	473498	473944	22	-	.	.
scaffold4	subtractBed	intrn	474878	475099	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	474878	475099	35	-	.	.
scaffold4	subtractBed	intrn	475206	476429	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1-Tx1	475206	476429	612	-	.	.
scaffold4	subtractBed	intrn	476772	477089	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1-Tx1	476772	477089	147	-	.	.
scaffold4	subtractBed	intrn	476461	476544	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	476461	476544	42	-	.	.
scaffold4	subtractBed	intrn	476520	477029	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1-Tx1	476520	477029	162	-	.	.
scaffold4	subtractBed	intrn	476431	476541	.	+	.	Parent=CGI_10021180;
	scaffold4	WUBlastX	LINE_L1	476431	476541	29	-	.	.
scaffold4	subtractBed	intrn	597341	598312	.	+	.	Parent=CGI_10021188;
	scaffold4	TRF	Tandem_Repeat	597341	598312	1332	+	.	.
scaffold4	subtractBed	intrn	597341	598315	.	+	.	Parent=CGI_10021188;
	scaffold4	TRF	Tandem_Repeat	597341	598315	1410	+	.	.
scaffold4	subtractBed	intrn	597341	598312	.	+	.	Parent=CGI_10021188;
	scaffold4	TRF	Tandem_Repeat	597341	598312	1314	+	.	.
scaffold4	subtractBed	intrn	600737	601034	.	+	.	Parent=CGI_10021188;
	scaffold4	TRF	Tandem_Repeat	600737	601034	479	+	.	.
scaffold4	subtractBed	intrn	606354	606409	.	+	.	Parent=CGI_10021188;
	scaffold4	TRF	Tandem_Repeat	606354	606409	112	+	.	.
scaffold40	subtractBed	intrn	31868	31933	.	-	.	Parent=CGI_10015097;
	scaffold40	TRF	Tandem_Repeat	31868	31933	132	+	.	.
scaffold40	subtractBed	intrn	34162	34551	.	-	.	Parent=CGI_10015097;
	scaffold40	TRF	Tandem_Repeat	34162	34571	473	+	.	.
scaffold40	subtractBed	intrn	36533	36942	.	-	.	Parent=CGI_10015097;
	scaffold40	TRF	Tandem_Repeat	36533	36942	473	+	.	.
scaffold40	subtractBed	intrn	38266	38304	.	-	.	Parent=CGI_10015097;
	scaffold40	TRF	Tandem_Repeat	38266	38304	60	+	.	.
scaffold40	subtractBed	intrn	42439	42559	.	-	.	Parent=CGI_10015097;
	scaffold40	TRF	Tandem_Repeat	42439	42559	174	+	.	.
scaffold40	subtractBed	intrn	130141	130180	.	-	.	Parent=CGI_10015102;
	scaffold40	TRF	Tandem_Repeat	130141	130180	80	+	.	.
scaffold40	subtractBed	intrn	132713	132754	.	-	.	Parent=CGI_10015102;
	scaffold40	TRF	Tandem_Repeat	132713	132754	84	+	.	.
scaffold40	subtractBed	intrn	145195	145268	.	-	.	Parent=CGI_10015103;
	scaffold40	TRF	Tandem_Repeat	145195	145268	71	+	.	.
scaffold40	subtractBed	intrn	172314	172341	.	+	.	Parent=CGI_10015105;
	scaffold40	TRF	Tandem_Repeat	172314	172341	56	+	.	.
scaffold40	subtractBed	intrn	255655	255770	.	-	.	Parent=CGI_10015106;
	scaffold40	WUBlastX	DNA_Academ	255655	257373	533	-	.	.
scaffold40	subtractBed	intrn	255366	255647	.	-	.	Parent=CGI_10015106;
	scaffold40	WUBlastX	DNA_Academ	255366	255647	95	-	.	.
scaffold40	subtractBed	intrn	256852	257373	.	-	.	Parent=CGI_10015106;
	scaffold40	WUBlastX	DNA_Academ	255655	257373	533	-	.	.
scaffold40	subtractBed	intrn	257378	257385	.	-	.	Parent=CGI_10015106;
	scaffold40	WUBlastX	DNA_Academ	257378	258352	348	-	.	.
scaffold40	subtractBed	intrn	379115	379171	.	+	.	Parent=CGI_10015108;
	scaffold40	TRF	Tandem_Repeat	379115	379171	114	+	.	.
scaffold40	subtractBed	intrn	390569	390611	.	+	.	Parent=CGI_10015108;
	scaffold40	TRF	Tandem_Repeat	390569	390611	86	+	.	.
scaffold400	subtractBed	intrn	20320	20444	.	-	.	Parent=CGI_10011430;
	scaffold400	TRF	Tandem_Repeat	20320	20444	216	+	.	.
scaffold400	subtractBed	intrn	36951	36992	.	-	.	Parent=CGI_10011430;
	scaffold400	TRF	Tandem_Repeat	36951	36992	84	+	.	.
scaffold400	subtractBed	intrn	38380	38471	.	-	.	Parent=CGI_10011430;
	scaffold400	TRF	Tandem_Repeat	38380	38471	157	+	.	.
scaffold400	subtractBed	intrn	39005	39078	.	-	.	Parent=CGI_10011430;
	scaffold400	TRF	Tandem_Repeat	39005	39078	148	+	.	.
scaffold400	subtractBed	intrn	46202	46280	.	+	.	Parent=CGI_10011431;
	scaffold400	TRF	Tandem_Repeat	46202	46280	158	+	.	.
scaffold400	subtractBed	intrn	57119	57408	.	+	.	Parent=CGI_10011431;
	scaffold400	TRF	Tandem_Repeat	57119	57408	158	+	.	.
scaffold400	subtractBed	intrn	60359	60515	.	+	.	Parent=CGI_10011431;
	scaffold400	TRF	Tandem_Repeat	60359	60524	142	+	.	.
scaffold400	subtractBed	intrn	84090	84206	.	-	.	Parent=CGI_10011433;
	scaffold400	TRF	Tandem_Repeat	84090	84206	99	+	.	.
scaffold400	subtractBed	intrn	84240	84452	.	-	.	Parent=CGI_10011433;
	scaffold400	TRF	Tandem_Repeat	84240	84452	206	+	.	.
scaffold400	subtractBed	intrn	84253	84452	.	-	.	Parent=CGI_10011433;
	scaffold400	TRF	Tandem_Repeat	84253	84452	318	+	.	.
scaffold400	subtractBed	intrn	94087	94170	.	-	.	Parent=CGI_10011433;
	scaffold400	TRF	Tandem_Repeat	94087	94170	57	+	.	.
scaffold400	subtractBed	intrn	94374	94423	.	-	.	Parent=CGI_10011433;
	scaffold400	TRF	Tandem_Repeat	94374	94423	100	+	.	.
scaffold400	subtractBed	intrn	164874	165673	.	+	.	Parent=CGI_10011434;
	scaffold400	TRF	Tandem_Repeat	164874	165673	740	+	.	.
scaffold400	subtractBed	intrn	183439	183500	.	-	.	Parent=CGI_10011436;
	scaffold400	TRF	Tandem_Repeat	183439	183500	117	+	.	.
scaffold400	subtractBed	intrn	197113	197310	.	-	.	Parent=CGI_10011437;
	scaffold400	WUBlastX	LINE_L1-Tx1	197113	197310	100	-	.	.
scaffold400	subtractBed	intrn	196960	197313	.	-	.	Parent=CGI_10011437;
	scaffold400	WUBlastX	LINE_L1-Tx1	196960	197313	88	-	.	.
scaffold400	subtractBed	intrn	197504	197776	.	-	.	Parent=CGI_10011437;
	scaffold400	WUBlastX	LINE_L1-Tx1	197504	197776	45	-	.	.
scaffold400	subtractBed	intrn	204732	205178	.	-	.	Parent=CGI_10011437;
	scaffold400	WUBlastX	RC_Helitron	204732	205178	95	-	.	.
scaffold400	subtractBed	intrn	266613	266933	.	-	.	Parent=CGI_10011440;
	scaffold400	WUBlastX	LINE_CR1	266613	266933	45	-	.	.
scaffold400	subtractBed	intrn	266436	267059	.	-	.	Parent=CGI_10011440;
	scaffold400	WUBlastX	LINE_CR1	266436	267059	44	-	.	.
scaffold400	subtractBed	intrn	265617	266861	.	-	.	Parent=CGI_10011440;
	scaffold400	WUBlastX	LINE_CR1-L2	265617	266861	404	-	.	.
scaffold400	subtractBed	intrn	264876	265330	.	-	.	Parent=CGI_10011440;
	scaffold400	WUBlastX	LINE_L2	264815	265330	107	-	.	.
scaffold400	subtractBed	intrn	265025	265621	.	-	.	Parent=CGI_10011440;
	scaffold400	WUBlastX	LINE_CR1-L2	265025	265621	461	-	.	.
scaffold400	subtractBed	intrn	285230	285330	.	-	.	Parent=CGI_10011441;
	scaffold400	TRF	Tandem_Repeat	285230	285330	87	+	.	.
scaffold400	subtractBed	intrn	285325	285416	.	-	.	Parent=CGI_10011441;
	scaffold400	TRF	Tandem_Repeat	285325	285416	96	+	.	.
scaffold400	subtractBed	intrn	285986	286208	.	-	.	Parent=CGI_10011441;
	scaffold400	TRF	Tandem_Repeat	285986	286208	139	+	.	.
scaffold400	subtractBed	intrn	286013	286151	.	-	.	Parent=CGI_10011441;
	scaffold400	TRF	Tandem_Repeat	286013	286151	84	+	.	.
scaffold400	subtractBed	intrn	288120	289382	.	-	.	Parent=CGI_10011441;
	scaffold400	WUBlastX	DNA_Sola	288120	289382	53	+	.	.
scaffold400	subtractBed	intrn	288573	289418	.	-	.	Parent=CGI_10011441;
	scaffold400	WUBlastX	DNA_Sola	288573	289418	266	+	.	.
scaffold40006	subtractBed	intrn	80442	80517	.	+	.	Parent=CGI_10003795;
	scaffold40006	TRF	Tandem_Repeat	80442	80517	100	+	.	.
scaffold40016	subtractBed	intrn	9401	9718	.	-	.	Parent=CGI_10003734;
	scaffold40016	TRF	Tandem_Repeat	9401	9718	209	+	.	.
scaffold40038	subtractBed	intrn	6232	6237	.	-	.	Parent=CGI_10003771;
	scaffold40038	WUBlastX	LTR_ERVK	6139	6237	47	-	.	.
scaffold40038	subtractBed	intrn	6718	6730	.	-	.	Parent=CGI_10003771;
	scaffold40038	WUBlastX	LTR_ERVK	6718	6843	72	-	.	.
scaffold40038	subtractBed	intrn	49600	49746	.	-	.	Parent=CGI_10003773;
	scaffold40038	TRF	Tandem_Repeat	49600	49746	122	+	.	.
scaffold40050	subtractBed	intrn	15526	15573	.	-	.	Parent=CGI_10003806;
	scaffold40050	TRF	Tandem_Repeat	15526	15573	78	+	.	.
scaffold40050	subtractBed	intrn	47833	47877	.	+	.	Parent=CGI_10003808;
	scaffold40050	TRF	Tandem_Repeat	47833	47877	65	+	.	.
scaffold40068	subtractBed	intrn	22757	22816	.	-	.	Parent=CGI_10003834;
	scaffold40068	TRF	Tandem_Repeat	22757	22816	111	+	.	.
scaffold40068	subtractBed	intrn	23480	23532	.	-	.	Parent=CGI_10003834;
	scaffold40068	TRF	Tandem_Repeat	23480	23532	52	+	.	.
scaffold40068	subtractBed	intrn	49753	50046	.	-	.	Parent=CGI_10003835;
	scaffold40068	WUBlastX	DNA_TcMar-Tc1	49753	50046	66	-	.	.
scaffold40068	subtractBed	intrn	49583	49744	.	-	.	Parent=CGI_10003835;
	scaffold40068	WUBlastX	DNA_TcMar-Tc1	49583	49744	29	-	.	.
scaffold40068	subtractBed	intrn	49753	49908	.	-	.	Parent=CGI_10003835;
	scaffold40068	WUBlastX	DNA_TcMar-Tc1	49753	49908	85	-	.	.
scaffold40068	subtractBed	intrn	49753	49965	.	-	.	Parent=CGI_10003835;
	scaffold40068	WUBlastX	DNA_TcMar-Tc1	49753	49965	78	-	.	.
scaffold40068	subtractBed	intrn	73754	73838	.	-	.	Parent=CGI_10003836;
	scaffold40068	TRF	Tandem_Repeat	73754	73838	152	+	.	.
scaffold40072	subtractBed	intrn	15328	15380	.	-	.	Parent=CGI_10003797;
	scaffold40072	TRF	Tandem_Repeat	15328	15380	106	+	.	.
scaffold40072	subtractBed	intrn	15427	15453	.	-	.	Parent=CGI_10003797;
	scaffold40072	TRF	Tandem_Repeat	15427	15453	54	+	.	.
scaffold40072	subtractBed	intrn	42023	42066	.	+	.	Parent=CGI_10003799;
	scaffold40072	TRF	Tandem_Repeat	42023	42066	61	+	.	.
scaffold40072	subtractBed	intrn	49959	50007	.	-	.	Parent=CGI_10003800;
	scaffold40072	TRF	Tandem_Repeat	49959	50007	80	+	.	.
scaffold40072	subtractBed	intrn	51616	51654	.	-	.	Parent=CGI_10003800;
	scaffold40072	TRF	Tandem_Repeat	51616	51654	51	+	.	.
scaffold40072	subtractBed	intrn	51815	52087	.	-	.	Parent=CGI_10003800;
	scaffold40072	TRF	Tandem_Repeat	51815	52087	185	+	.	.
scaffold40072	subtractBed	intrn	64139	64215	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	64139	64215	65	+	.	.
scaffold40072	subtractBed	intrn	68980	69189	.	-	.	Parent=CGI_10003801;
	scaffold40072	WUBlastX	DNA_Crypton	68980	69189	68	+	.	.
scaffold40072	subtractBed	intrn	70874	70907	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	70874	70907	68	+	.	.
scaffold40072	subtractBed	intrn	72615	72714	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	72615	72714	67	+	.	.
scaffold40072	subtractBed	intrn	72990	73062	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	72990	73062	119	+	.	.
scaffold40072	subtractBed	intrn	73457	73500	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	73457	73500	88	+	.	.
scaffold40072	subtractBed	intrn	73575	73623	.	-	.	Parent=CGI_10003801;
	scaffold40072	TRF	Tandem_Repeat	73575	73623	50	+	.	.
scaffold40076	subtractBed	intrn	817	1179	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	817	1179	71	+	.	.
scaffold40076	subtractBed	intrn	818	1178	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	818	1178	91	+	.	.
scaffold40076	subtractBed	intrn	818	874	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	818	874	53	+	.	.
scaffold40076	subtractBed	intrn	842	886	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	842	886	54	+	.	.
scaffold40076	subtractBed	intrn	951	1178	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	951	1178	66	+	.	.
scaffold40076	subtractBed	intrn	2445	2549	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	2445	2549	187	+	.	.
scaffold40076	subtractBed	intrn	4535	4559	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	4535	4559	50	+	.	.
scaffold40076	subtractBed	intrn	11163	11213	.	+	.	Parent=CGI_10003785;
	scaffold40076	TRF	Tandem_Repeat	11163	11213	93	+	.	.
scaffold40076	subtractBed	intrn	63575	63757	.	+	.	Parent=CGI_10003787;
	scaffold40076	TRF	Tandem_Repeat	63575	63757	179	+	.	.
scaffold40076	subtractBed	intrn	62805	63179	.	+	.	Parent=CGI_10003787;
	scaffold40076	WUBlastX	LTR_Gypsy	62805	63179	133	+	.	.
scaffold40076	subtractBed	intrn	62600	62827	.	+	.	Parent=CGI_10003787;
	scaffold40076	WUBlastX	LTR_Gypsy-Cigr	62600	62827	89	+	.	.
scaffold40076	subtractBed	intrn	62408	62479	.	+	.	Parent=CGI_10003787;
	scaffold40076	WUBlastX	LTR_Gypsy	62408	62479	30	+	.	.
scaffold40080	subtractBed	intrn	24649	25263	.	-	.	Parent=CGI_10003844;
	scaffold40080	WUBlastX	LINE_RTE-BovB	24649	25263	45	+	.	.
scaffold40080	subtractBed	intrn	24514	25059	.	-	.	Parent=CGI_10003844;
	scaffold40080	WUBlastX	LINE_RTE-BovB	24514	25059	68	+	.	.
scaffold40080	subtractBed	intrn	24259	24366	.	-	.	Parent=CGI_10003844;
	scaffold40080	WUBlastX	LINE_RTE-BovB	24259	24366	44	+	.	.
scaffold40080	subtractBed	intrn	61612	61962	.	-	.	Parent=CGI_10003845;
	scaffold40080	WUBlastX	LTR_Ngaro	61612	61962	90	-	.	.
scaffold40080	subtractBed	intrn	61693	61962	.	-	.	Parent=CGI_10003845;
	scaffold40080	WUBlastX	LTR_Ngaro	61693	61962	109	-	.	.
scaffold40080	subtractBed	intrn	65541	66032	.	-	.	Parent=CGI_10003845;
	scaffold40080	WUBlastX	DNA_Harbinger	65541	66032	393	+	.	.
scaffold40080	subtractBed	intrn	67611	67874	.	-	.	Parent=CGI_10003845;
	scaffold40080	WUBlastX	DNA_Harbinger	67611	67874	124	-	.	.
scaffold40080	subtractBed	intrn	67864	67983	.	-	.	Parent=CGI_10003845;
	scaffold40080	WUBlastX	DNA_Harbinger	67864	67983	23	-	.	.
scaffold40088	subtractBed	intrn	45737	45810	.	+	.	Parent=CGI_10003848;
	scaffold40088	TRF	Tandem_Repeat	45737	45810	55	+	.	.
scaffold40088	subtractBed	intrn	47052	47151	.	+	.	Parent=CGI_10003848;
	scaffold40088	TRF	Tandem_Repeat	47052	47151	200	+	.	.
scaffold40088	subtractBed	intrn	47218	47260	.	+	.	Parent=CGI_10003848;
	scaffold40088	TRF	Tandem_Repeat	47218	47260	77	+	.	.
scaffold40088	subtractBed	intrn	56646	56762	.	+	.	Parent=CGI_10003849;
	scaffold40088	TRF	Tandem_Repeat	56625	56762	140	+	.	.
scaffold40094	subtractBed	intrn	6914	6962	.	-	.	Parent=CGI_10003838;
	scaffold40094	TRF	Tandem_Repeat	6914	6962	98	+	.	.
scaffold40094	subtractBed	intrn	43957	44010	.	+	.	Parent=CGI_10003840;
	scaffold40094	TRF	Tandem_Repeat	43957	44010	108	+	.	.
scaffold40094	subtractBed	intrn	50313	50349	.	+	.	Parent=CGI_10003840;
	scaffold40094	TRF	Tandem_Repeat	50313	50349	74	+	.	.
scaffold40094	subtractBed	intrn	57558	57602	.	-	.	Parent=CGI_10003841;
	scaffold40094	TRF	Tandem_Repeat	57558	57602	90	+	.	.
scaffold40094	subtractBed	intrn	62407	62443	.	+	.	Parent=CGI_10003842;
	scaffold40094	TRF	Tandem_Repeat	62407	62443	74	+	.	.
scaffold40094	subtractBed	intrn	63816	64013	.	+	.	Parent=CGI_10003842;
	scaffold40094	WUBlastX	DNA_Zator	63816	64013	74	-	.	.
scaffold40094	subtractBed	intrn	64172	64255	.	+	.	Parent=CGI_10003842;
	scaffold40094	WUBlastX	DNA_Zator	64172	64255	30	-	.	.
scaffold40094	subtractBed	intrn	77143	77221	.	+	.	Parent=CGI_10003843;
	scaffold40094	TRF	Tandem_Repeat	77143	77221	95	+	.	.
scaffold40094	subtractBed	intrn	77195	77228	.	+	.	Parent=CGI_10003843;
	scaffold40094	TRF	Tandem_Repeat	77195	77228	50	+	.	.
scaffold401	subtractBed	intrn	9882	10649	.	+	.	Parent=CGI_10006983;
	scaffold401	WUBlastX	DNA_TcMar-Tc1	9882	10649	83	+	.	.
scaffold401	subtractBed	intrn	10503	10676	.	+	.	Parent=CGI_10006983;
	scaffold401	WUBlastX	DNA_TcMar-Tc1	10503	10676	60	+	.	.
scaffold401	subtractBed	intrn	64283	64310	.	+	.	Parent=CGI_10006988;
	scaffold401	TRF	Tandem_Repeat	64283	64310	56	+	.	.
scaffold401	subtractBed	intrn	64437	64502	.	+	.	Parent=CGI_10006988;
	scaffold401	TRF	Tandem_Repeat	64437	64502	123	+	.	.
scaffold401	subtractBed	intrn	143932	143988	.	+	.	Parent=CGI_10006992;
	scaffold401	TRF	Tandem_Repeat	143932	143988	114	+	.	.
scaffold401	subtractBed	intrn	156135	156413	.	+	.	Parent=CGI_10006994;
	scaffold401	WUBlastX	LINE_RTE-X	156135	156413	99	-	.	.
scaffold401	subtractBed	intrn	155825	156112	.	+	.	Parent=CGI_10006994;
	scaffold401	WUBlastX	LINE_RTE-BovB	155825	156112	77	-	.	.
scaffold401	subtractBed	intrn	156382	156465	.	+	.	Parent=CGI_10006994;
	scaffold401	WUBlastX	LINE_RTE-X	156382	156465	35	-	.	.
scaffold401	subtractBed	intrn	156382	156531	.	+	.	Parent=CGI_10006994;
	scaffold401	WUBlastX	LINE_RTE-X	156382	156531	33	-	.	.
scaffold401	subtractBed	intrn	156159	156374	.	+	.	Parent=CGI_10006994;
	scaffold401	WUBlastX	LINE_RTE-X	156159	156374	102	-	.	.
scaffold40100	subtractBed	intrn	18391	18423	.	-	.	Parent=CGI_10003868;
	scaffold40100	TRF	Tandem_Repeat	18391	18423	66	+	.	.
scaffold40100	subtractBed	intrn	74225	74256	.	-	.	Parent=CGI_10003871;
	scaffold40100	TRF	Tandem_Repeat	74225	74256	55	+	.	.
scaffold40100	subtractBed	intrn	76172	76203	.	-	.	Parent=CGI_10003871;
	scaffold40100	TRF	Tandem_Repeat	76172	76203	55	+	.	.
scaffold40100	subtractBed	intrn	84837	84877	.	+	.	Parent=CGI_10003872;
	scaffold40100	TRF	Tandem_Repeat	84837	84877	82	+	.	.
scaffold40104	subtractBed	intrn	24009	24043	.	-	.	Parent=CGI_10003867;
	scaffold40104	TRF	Tandem_Repeat	24009	24043	54	+	.	.
scaffold40104	subtractBed	intrn	26945	27007	.	-	.	Parent=CGI_10003867;
	scaffold40104	TRF	Tandem_Repeat	26945	27007	117	+	.	.
scaffold40104	subtractBed	intrn	35526	35669	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_Kolobok-IS4	35526	35669	29	+	.	.
scaffold40104	subtractBed	intrn	37897	38400	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_Kolobok-IS4	37897	38400	168	-	.	.
scaffold40104	subtractBed	intrn	35526	35732	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_Kolobok-IS4	35526	35732	21	+	.	.
scaffold40104	subtractBed	intrn	34871	35101	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_IS4EU	34871	35101	22	+	.	.
scaffold40104	subtractBed	intrn	35775	36605	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_IS4EU	35775	36605	129	+	.	.
scaffold40104	subtractBed	intrn	36123	36509	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_IS4EU	36123	36509	172	+	.	.
scaffold40104	subtractBed	intrn	37515	37913	.	-	.	Parent=CGI_10003867;
	scaffold40104	WUBlastX	DNA_IS4EU	37515	37913	227	-	.	.
scaffold40106	subtractBed	intrn	2316	2476	.	-	.	Parent=CGI_10003851;
	scaffold40106	TRF	Tandem_Repeat	2316	2476	313	+	.	.
scaffold40106	subtractBed	intrn	5699	5726	.	-	.	Parent=CGI_10003851;
	scaffold40106	TRF	Tandem_Repeat	5699	5726	56	+	.	.
scaffold40106	subtractBed	intrn	30725	30954	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	30725	30954	336	+	.	.
scaffold40106	subtractBed	intrn	30725	31303	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	30725	31313	786	+	.	.
scaffold40106	subtractBed	intrn	30725	31303	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	30725	31313	786	+	.	.
scaffold40106	subtractBed	intrn	30947	31303	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	30947	31313	527	+	.	.
scaffold40106	subtractBed	intrn	32947	33134	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	32947	33134	152	+	.	.
scaffold40106	subtractBed	intrn	33203	33237	.	-	.	Parent=CGI_10003854;
	scaffold40106	TRF	Tandem_Repeat	33203	33237	70	+	.	.
scaffold40106	subtractBed	intrn	45347	45422	.	-	.	Parent=CGI_10003856;
	scaffold40106	TRF	Tandem_Repeat	45347	45422	143	+	.	.
scaffold40106	subtractBed	intrn	47973	48100	.	-	.	Parent=CGI_10003856;
	scaffold40106	TRF	Tandem_Repeat	47973	48100	96	+	.	.
scaffold40106	subtractBed	intrn	50855	51097	.	-	.	Parent=CGI_10003856;
	scaffold40106	WUBlastX	LINE_RTE-X	50855	51097	54	-	.	.
scaffold40106	subtractBed	intrn	51049	51279	.	-	.	Parent=CGI_10003856;
	scaffold40106	WUBlastX	LINE_RTE-X	51049	51279	72	-	.	.
scaffold40106	subtractBed	intrn	71751	71811	.	-	.	Parent=CGI_10003859;
	scaffold40106	TRF	Tandem_Repeat	71751	71811	122	+	.	.
scaffold40106	subtractBed	intrn	77210	77259	.	+	.	Parent=CGI_10003860;
	scaffold40106	TRF	Tandem_Repeat	77210	77259	75	+	.	.
scaffold40106	subtractBed	intrn	77641	77684	.	+	.	Parent=CGI_10003860;
	scaffold40106	TRF	Tandem_Repeat	77641	77684	88	+	.	.
scaffold40114	subtractBed	intrn	15625	15677	.	-	.	Parent=CGI_10003918;
	scaffold40114	TRF	Tandem_Repeat	15625	15677	56	+	.	.
scaffold40114	subtractBed	intrn	23048	23106	.	+	.	Parent=CGI_10003919;
	scaffold40114	TRF	Tandem_Repeat	23048	23106	109	+	.	.
scaffold40114	subtractBed	intrn	21601	21744	.	+	.	Parent=CGI_10003919;
	scaffold40114	WUBlastX	LINE_CR1-L2	21601	21744	57	+	.	.
scaffold40114	subtractBed	intrn	21571	21756	.	+	.	Parent=CGI_10003919;
	scaffold40114	WUBlastX	LINE_CR1-L2	21571	21756	37	+	.	.
scaffold40114	subtractBed	intrn	21758	21955	.	+	.	Parent=CGI_10003919;
	scaffold40114	WUBlastX	LINE_L2	21758	21955	81	+	.	.
scaffold40114	subtractBed	intrn	28066	28092	.	+	.	Parent=CGI_10003919;
	scaffold40114	TRF	Tandem_Repeat	28066	28092	54	+	.	.
scaffold40114	subtractBed	intrn	39037	39093	.	-	.	Parent=CGI_10003920;
	scaffold40114	TRF	Tandem_Repeat	39037	39093	114	+	.	.
scaffold40114	subtractBed	intrn	47690	47744	.	+	.	Parent=CGI_10003921;
	scaffold40114	TRF	Tandem_Repeat	47690	47744	110	+	.	.
scaffold40114	subtractBed	intrn	63502	63576	.	-	.	Parent=CGI_10003922;
	scaffold40114	TRF	Tandem_Repeat	63502	63576	132	+	.	.
scaffold40120	subtractBed	intrn	32595	32636	.	-	.	Parent=CGI_10003877;
	scaffold40120	TRF	Tandem_Repeat	32595	32636	68	+	.	.
scaffold40120	subtractBed	intrn	32596	32633	.	-	.	Parent=CGI_10003877;
	scaffold40120	TRF	Tandem_Repeat	32596	32633	51	+	.	.
scaffold40120	subtractBed	intrn	49242	49317	.	-	.	Parent=CGI_10003878;
	scaffold40120	TRF	Tandem_Repeat	49242	49317	55	+	.	.
scaffold40120	subtractBed	intrn	50397	51258	.	-	.	Parent=CGI_10003878;
	scaffold40120	TRF	Tandem_Repeat	50397	51258	1118	+	.	.
scaffold40120	subtractBed	intrn	61431	61520	.	+	.	Parent=CGI_10003879;
	scaffold40120	TRF	Tandem_Repeat	61431	61520	80	+	.	.
scaffold40120	subtractBed	intrn	63147	63176	.	+	.	Parent=CGI_10003879;
	scaffold40120	TRF	Tandem_Repeat	63147	63176	60	+	.	.
scaffold40120	subtractBed	intrn	69162	69512	.	+	.	Parent=CGI_10003879;
	scaffold40120	WUBlastX	LINE_L1-Tx1	69162	69512	68	+	.	.
scaffold40134	subtractBed	intrn	24116	24890	.	-	.	Parent=CGI_10003880;
	scaffold40134	TRF	Tandem_Repeat	24116	24890	1062	+	.	.
scaffold40134	subtractBed	intrn	30223	30259	.	-	.	Parent=CGI_10003881;
	scaffold40134	TRF	Tandem_Repeat	30223	30259	65	+	.	.
scaffold40134	subtractBed	intrn	29353	29472	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	29353	29472	69	+	.	.
scaffold40134	subtractBed	intrn	27976	28320	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	27976	28320	99	+	.	.
scaffold40134	subtractBed	intrn	29537	29767	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	29537	29767	83	+	.	.
scaffold40134	subtractBed	intrn	27904	28236	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	27904	28236	32	+	.	.
scaffold40134	subtractBed	intrn	28069	28320	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	28069	28320	106	+	.	.
scaffold40134	subtractBed	intrn	29011	29136	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	29011	29136	116	+	.	.
scaffold40134	subtractBed	intrn	29576	29746	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	29576	29746	123	+	.	.
scaffold40134	subtractBed	intrn	29955	30140	.	-	.	Parent=CGI_10003881;
	scaffold40134	WUBlastX	DNA_Harbinger	29955	30140	31	+	.	.
scaffold40134	subtractBed	intrn	36950	37096	.	-	.	Parent=CGI_10003882;
	scaffold40134	WUBlastX	DNA_Harbinger	36950	37096	44	-	.	.
scaffold40134	subtractBed	intrn	43743	43790	.	+	.	Parent=CGI_10003883;
	scaffold40134	TRF	Tandem_Repeat	43743	43790	51	+	.	.
scaffold40134	subtractBed	intrn	43743	43946	.	+	.	Parent=CGI_10003883;
	scaffold40134	TRF	Tandem_Repeat	43743	43946	149	+	.	.
scaffold40134	subtractBed	intrn	43870	43940	.	+	.	Parent=CGI_10003883;
	scaffold40134	TRF	Tandem_Repeat	43870	43940	61	+	.	.
scaffold40134	subtractBed	intrn	39631	39792	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_Penelope	39631	39792	45	+	.	.
scaffold40134	subtractBed	intrn	39667	40224	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_Penelope	39667	40224	145	+	.	.
scaffold40134	subtractBed	intrn	43116	43736	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	43116	43736	389	-	.	.
scaffold40134	subtractBed	intrn	44752	46563	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	44752	46563	1492	-	.	.
scaffold40134	subtractBed	intrn	39670	40131	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_Penelope	39670	40131	160	+	.	.
scaffold40134	subtractBed	intrn	40993	42090	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	40993	42090	657	-	.	.
scaffold40134	subtractBed	intrn	42459	42632	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LTR_Gypsy	42459	42632	21	-	.	.
scaffold40134	subtractBed	intrn	50796	50885	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	50796	50885	29	-	.	.
scaffold40134	subtractBed	intrn	50876	51160	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	50876	51160	179	-	.	.
scaffold40134	subtractBed	intrn	50113	50799	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	DNA_Maverick	50113	50799	316	-	.	.
scaffold40134	subtractBed	intrn	68146	68209	.	+	.	Parent=CGI_10003883;
	scaffold40134	TRF	Tandem_Repeat	68146	68209	110	+	.	.
scaffold40134	subtractBed	intrn	68378	68411	.	+	.	Parent=CGI_10003883;
	scaffold40134	TRF	Tandem_Repeat	68378	68411	68	+	.	.
scaffold40134	subtractBed	intrn	70083	70562	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	70083	70562	55	+	.	.
scaffold40134	subtractBed	intrn	69800	69946	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	69800	69946	49	+	.	.
scaffold40134	subtractBed	intrn	69442	69819	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	69442	69819	143	+	.	.
scaffold40134	subtractBed	intrn	69975	70445	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	69975	70445	53	+	.	.
scaffold40134	subtractBed	intrn	70053	70409	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	70053	70409	117	+	.	.
scaffold40134	subtractBed	intrn	69860	69964	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	69860	69964	40	+	.	.
scaffold40134	subtractBed	intrn	69439	69762	.	+	.	Parent=CGI_10003883;
	scaffold40134	WUBlastX	LINE_RTE-X	69439	69762	149	+	.	.
scaffold40150	subtractBed	intrn	35932	36068	.	-	.	Parent=CGI_10003904;
	scaffold40150	TRF	Tandem_Repeat	35932	36068	175	+	.	.
scaffold40150	subtractBed	intrn	36969	37270	.	-	.	Parent=CGI_10003904;
	scaffold40150	TRF	Tandem_Repeat	36969	37287	372	+	.	.
scaffold40150	subtractBed	intrn	42940	43016	.	-	.	Parent=CGI_10003904;
	scaffold40150	TRF	Tandem_Repeat	42940	43016	154	+	.	.
scaffold40154	subtractBed	intrn	27520	28065	.	-	.	Parent=CGI_10003875;
	scaffold40154	WUBlastX	LTR_Ngaro	27520	28065	230	-	.	.
scaffold40154	subtractBed	intrn	28046	28267	.	-	.	Parent=CGI_10003875;
	scaffold40154	WUBlastX	LTR_Ngaro	28046	28267	146	-	.	.
scaffold40154	subtractBed	intrn	27378	27485	.	-	.	Parent=CGI_10003875;
	scaffold40154	WUBlastX	LTR_Ngaro	27378	27485	21	-	.	.
scaffold40156	subtractBed	intrn	40272	40311	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	40272	40311	53	+	.	.
scaffold40156	subtractBed	intrn	40677	40741	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	40677	40741	68	+	.	.
scaffold40156	subtractBed	intrn	40657	40898	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	40657	40898	282	+	.	.
scaffold40156	subtractBed	intrn	40660	40862	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	40660	40862	131	+	.	.
scaffold40156	subtractBed	intrn	41721	41967	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	41721	41967	313	+	.	.
scaffold40156	subtractBed	intrn	41742	41838	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	41742	41838	56	+	.	.
scaffold40156	subtractBed	intrn	41887	42040	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	41887	42040	190	+	.	.
scaffold40156	subtractBed	intrn	60963	61008	.	-	.	Parent=CGI_10003886;
	scaffold40156	TRF	Tandem_Repeat	60963	61008	92	+	.	.
scaffold40164	subtractBed	intrn	9810	9870	.	-	.	Parent=CGI_10003898;
	scaffold40164	TRF	Tandem_Repeat	9810	9870	122	+	.	.
scaffold40164	subtractBed	intrn	8043	8123	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1	8043	8123	33	+	.	.
scaffold40164	subtractBed	intrn	7681	7722	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	7681	7722	27	+	.	.
scaffold40164	subtractBed	intrn	8255	8404	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	8255	8404	37	+	.	.
scaffold40164	subtractBed	intrn	8058	8108	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	8058	8108	34	+	.	.
scaffold40164	subtractBed	intrn	8156	8401	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	8156	8401	20	+	.	.
scaffold40164	subtractBed	intrn	7751	7945	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	7751	7945	63	+	.	.
scaffold40164	subtractBed	intrn	7681	7743	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1	7681	7743	24	+	.	.
scaffold40164	subtractBed	intrn	7760	8008	.	-	.	Parent=CGI_10003898;
	scaffold40164	WUBlastX	LINE_L1-Tx1	7760	8008	59	+	.	.
scaffold40164	subtractBed	intrn	79462	79505	.	+	.	Parent=CGI_10003902;
	scaffold40164	TRF	Tandem_Repeat	79462	79505	88	+	.	.
scaffold40172	subtractBed	intrn	12001	12177	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1-Tx1	12001	12177	45	+	.	.
scaffold40172	subtractBed	intrn	12176	12919	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1-Tx1	12176	12919	230	+	.	.
scaffold40172	subtractBed	intrn	12951	13388	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1-Tx1	12951	13388	73	+	.	.
scaffold40172	subtractBed	intrn	12927	13469	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1-Tx1	12927	13469	58	+	.	.
scaffold40172	subtractBed	intrn	37076	37145	.	+	.	Parent=CGI_10003930;
	scaffold40172	TRF	Tandem_Repeat	37076	37145	131	+	.	.
scaffold40172	subtractBed	intrn	37383	37520	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1	37383	37520	50	-	.	.
scaffold40172	subtractBed	intrn	37356	37520	.	+	.	Parent=CGI_10003930;
	scaffold40172	WUBlastX	LINE_L1-Tx1	37356	37520	31	-	.	.
scaffold40182	subtractBed	intrn	18910	19005	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_I	18910	19005	41	+	.	.
scaffold40182	subtractBed	intrn	19805	19942	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_RTE-X	19805	19942	67	+	.	.
scaffold40182	subtractBed	intrn	17636	17770	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_L2	17636	17770	22	+	.	.
scaffold40182	subtractBed	intrn	18582	18830	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_RTE-BovB	18582	18830	36	+	.	.
scaffold40182	subtractBed	intrn	17597	17698	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_L2	17597	17698	20	+	.	.
scaffold40182	subtractBed	intrn	18675	18797	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_L2	18675	18797	39	+	.	.
scaffold40182	subtractBed	intrn	18937	19143	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_RTE-X	18937	19143	29	+	.	.
scaffold40182	subtractBed	intrn	19739	19942	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_RTE-X	19739	19942	49	+	.	.
scaffold40182	subtractBed	intrn	18753	18830	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_RTE-X	18753	18830	57	+	.	.
scaffold40182	subtractBed	intrn	17636	17698	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_Jockey	17636	17698	26	+	.	.
scaffold40182	subtractBed	intrn	18696	18818	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_Jockey	18696	18818	41	+	.	.
scaffold40182	subtractBed	intrn	19715	20029	.	+	.	Parent=CGI_10003936;
	scaffold40182	WUBlastX	LINE_CR1	19715	20029	38	+	.	.
scaffold40182	subtractBed	intrn	23696	23731	.	+	.	Parent=CGI_10003936;
	scaffold40182	TRF	Tandem_Repeat	23696	23731	63	+	.	.
scaffold40182	subtractBed	intrn	50937	51086	.	+	.	Parent=CGI_10003941;
	scaffold40182	TRF	Tandem_Repeat	50937	51086	218	+	.	.
scaffold40182	subtractBed	intrn	68461	68514	.	+	.	Parent=CGI_10003943;
	scaffold40182	TRF	Tandem_Repeat	68461	68514	108	+	.	.
scaffold40182	subtractBed	intrn	70389	70430	.	+	.	Parent=CGI_10003943;
	scaffold40182	TRF	Tandem_Repeat	70389	70430	59	+	.	.
scaffold40182	subtractBed	intrn	71628	72628	.	+	.	Parent=CGI_10003943;
	scaffold40182	TRF	Tandem_Repeat	71628	72628	1289	+	.	.
scaffold40182	subtractBed	intrn	80262	80366	.	+	.	Parent=CGI_10003943;
	scaffold40182	TRF	Tandem_Repeat	80262	80366	74	+	.	.
scaffold40182	subtractBed	intrn	80307	80414	.	+	.	Parent=CGI_10003943;
	scaffold40182	TRF	Tandem_Repeat	80307	80414	67	+	.	.
scaffold40186	subtractBed	intrn	24810	25448	.	-	.	Parent=CGI_10003927;
	scaffold40186	WUBlastX	DNA_TcMar-Tc1	24810	25448	59	-	.	.
scaffold40186	subtractBed	intrn	24493	24948	.	-	.	Parent=CGI_10003927;
	scaffold40186	WUBlastX	DNA_TcMar-Tc1	24493	24948	240	-	.	.
scaffold40186	subtractBed	intrn	24891	25229	.	-	.	Parent=CGI_10003927;
	scaffold40186	WUBlastX	DNA_TcMar-Tc1	24891	25229	122	-	.	.
scaffold40186	subtractBed	intrn	22401	23225	.	-	.	Parent=CGI_10003927;
	scaffold40186	WUBlastX	LINE_RTE-BovB	22401	23225	56	+	.	.
scaffold40186	subtractBed	intrn	72000	72055	.	+	.	Parent=CGI_10003928;
	scaffold40186	TRF	Tandem_Repeat	72000	72055	112	+	.	.
scaffold40194	subtractBed	intrn	6682	6812	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	6682	6812	146	+	.	.
scaffold40194	subtractBed	intrn	6682	6812	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	6682	6812	178	+	.	.
scaffold40194	subtractBed	intrn	7057	7091	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	7057	7091	70	+	.	.
scaffold40194	subtractBed	intrn	7999	8036	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	7999	8036	76	+	.	.
scaffold40194	subtractBed	intrn	8281	8406	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	8281	8406	136	+	.	.
scaffold40194	subtractBed	intrn	8281	8395	.	+	.	Parent=CGI_10003949;
	scaffold40194	TRF	Tandem_Repeat	8281	8395	167	+	.	.
scaffold402	subtractBed	intrn	24810	24864	.	+	.	Parent=CGI_10019317;
	scaffold402	TRF	Tandem_Repeat	24810	24864	101	+	.	.
scaffold402	subtractBed	intrn	39945	40002	.	+	.	Parent=CGI_10019317;
	scaffold402	TRF	Tandem_Repeat	39945	40002	107	+	.	.
scaffold402	subtractBed	intrn	42484	42522	.	+	.	Parent=CGI_10019317;
	scaffold402	TRF	Tandem_Repeat	42484	42522	53	+	.	.
scaffold402	subtractBed	intrn	167690	167729	.	+	.	Parent=CGI_10019321;
	scaffold402	TRF	Tandem_Repeat	167690	167729	80	+	.	.
scaffold402	subtractBed	intrn	168594	168639	.	+	.	Parent=CGI_10019321;
	scaffold402	TRF	Tandem_Repeat	168594	168639	76	+	.	.
scaffold402	subtractBed	intrn	168589	168642	.	+	.	Parent=CGI_10019321;
	scaffold402	TRF	Tandem_Repeat	168589	168642	76	+	.	.
scaffold402	subtractBed	intrn	181048	181094	.	+	.	Parent=CGI_10019321;
	scaffold402	TRF	Tandem_Repeat	181048	181094	94	+	.	.
scaffold402	subtractBed	intrn	182025	182061	.	+	.	Parent=CGI_10019321;
	scaffold402	TRF	Tandem_Repeat	182025	182061	65	+	.	.
scaffold402	subtractBed	intrn	225496	225558	.	+	.	Parent=CGI_10019322;
	scaffold402	TRF	Tandem_Repeat	225496	225558	73	+	.	.
scaffold402	subtractBed	intrn	225672	225697	.	+	.	Parent=CGI_10019322;
	scaffold402	TRF	Tandem_Repeat	225672	225697	52	+	.	.
scaffold402	subtractBed	intrn	225811	225879	.	+	.	Parent=CGI_10019322;
	scaffold402	TRF	Tandem_Repeat	225811	225879	120	+	.	.
scaffold402	subtractBed	intrn	290848	290901	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	290848	290901	72	+	.	.
scaffold402	subtractBed	intrn	295546	295583	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	295546	295583	76	+	.	.
scaffold402	subtractBed	intrn	295581	295614	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	295581	295614	68	+	.	.
scaffold402	subtractBed	intrn	296130	296164	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	296130	296164	52	+	.	.
scaffold402	subtractBed	intrn	296877	297017	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	296877	297017	99	+	.	.
scaffold402	subtractBed	intrn	297806	297914	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	297806	297914	82	+	.	.
scaffold402	subtractBed	intrn	308506	308544	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	308506	308544	51	+	.	.
scaffold402	subtractBed	intrn	310288	310317	.	+	.	Parent=CGI_10019324;
	scaffold402	TRF	Tandem_Repeat	310288	310317	53	+	.	.
scaffold402	subtractBed	intrn	350218	350426	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	350218	350426	312	+	.	.
scaffold402	subtractBed	intrn	356788	356823	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	356788	356823	72	+	.	.
scaffold402	subtractBed	intrn	362752	363551	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	362752	363551	820	+	.	.
scaffold402	subtractBed	intrn	370898	372427	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	370898	372427	2263	+	.	.
scaffold402	subtractBed	intrn	370898	372427	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	370898	372427	2262	+	.	.
scaffold402	subtractBed	intrn	373035	374003	.	+	.	Parent=CGI_10019325;
	scaffold402	TRF	Tandem_Repeat	373035	374003	1749	+	.	.
scaffold402	subtractBed	intrn	391244	391348	.	-	.	Parent=CGI_10019326;
	scaffold402	TRF	Tandem_Repeat	391244	391348	103	+	.	.
scaffold402	subtractBed	intrn	405369	406209	.	+	.	Parent=CGI_10019327;
	scaffold402	TRF	Tandem_Repeat	405369	406209	975	+	.	.
scaffold402	subtractBed	intrn	418635	418679	.	+	.	Parent=CGI_10019328;
	scaffold402	TRF	Tandem_Repeat	418635	418679	90	+	.	.
scaffold402	subtractBed	intrn	425110	425164	.	+	.	Parent=CGI_10019328;
	scaffold402	TRF	Tandem_Repeat	425110	425164	92	+	.	.
scaffold402	subtractBed	intrn	425175	426012	.	+	.	Parent=CGI_10019328;
	scaffold402	TRF	Tandem_Repeat	425175	426012	1105	+	.	.
scaffold402	subtractBed	intrn	447841	449133	.	+	.	Parent=CGI_10019329;
	scaffold402	TRF	Tandem_Repeat	447841	449133	1794	+	.	.
scaffold402	subtractBed	intrn	517505	517657	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1-Tx1	517505	517657	45	+	.	.
scaffold402	subtractBed	intrn	517177	517326	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517177	517326	59	+	.	.
scaffold402	subtractBed	intrn	517439	517660	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1-Tx1	517439	517660	40	+	.	.
scaffold402	subtractBed	intrn	517662	517847	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517662	517847	77	+	.	.
scaffold402	subtractBed	intrn	517219	517314	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517219	517314	65	+	.	.
scaffold402	subtractBed	intrn	517674	517880	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517674	517880	26	+	.	.
scaffold402	subtractBed	intrn	517328	517423	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517328	517423	24	+	.	.
scaffold402	subtractBed	intrn	517629	517817	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1	517629	517817	66	+	.	.
scaffold402	subtractBed	intrn	523747	524049	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1-Tx1	523747	524049	113	-	.	.
scaffold402	subtractBed	intrn	523747	524109	.	+	.	Parent=CGI_10019333;
	scaffold402	WUBlastX	LINE_L1-Tx1	523747	524109	82	-	.	.
scaffold402	subtractBed	intrn	557142	557356	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	557142	557356	326	+	.	.
scaffold402	subtractBed	intrn	556689	557356	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	556689	557356	322	+	.	.
scaffold402	subtractBed	intrn	556689	557356	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	556689	557356	773	+	.	.
scaffold402	subtractBed	intrn	556753	557356	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	556753	557356	645	+	.	.
scaffold402	subtractBed	intrn	561801	562057	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	561801	562057	245	+	.	.
scaffold402	subtractBed	intrn	562404	563167	.	-	.	Parent=CGI_10019334;
	scaffold402	TRF	Tandem_Repeat	562404	563167	846	+	.	.
scaffold40208	subtractBed	intrn	35986	36675	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	35986	36675	1240	+	.	.
scaffold40208	subtractBed	intrn	36680	36713	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	36680	36713	50	+	.	.
scaffold40208	subtractBed	intrn	36683	36726	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	36683	36726	70	+	.	.
scaffold40208	subtractBed	intrn	35512	35775	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	35512	35775	35	+	.	.
scaffold40208	subtractBed	intrn	36776	37969	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	36776	37969	814	+	.	.
scaffold40208	subtractBed	intrn	37962	38708	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	37962	38708	156	+	.	.
scaffold40208	subtractBed	intrn	34978	35715	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	34978	35715	275	+	.	.
scaffold40208	subtractBed	intrn	32816	33775	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	32816	33775	573	+	.	.
scaffold40208	subtractBed	intrn	33775	35592	.	+	.	Parent=CGI_10003954;
	scaffold40208	WUBlastX	RC_Helitron	33775	35592	1020	+	.	.
scaffold40208	subtractBed	intrn	42533	42846	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	42533	42846	154	+	.	.
scaffold40208	subtractBed	intrn	47722	47760	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	47722	47760	78	+	.	.
scaffold40208	subtractBed	intrn	56581	56634	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	56581	56634	101	+	.	.
scaffold40208	subtractBed	intrn	60456	60484	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	60456	60484	58	+	.	.
scaffold40208	subtractBed	intrn	61227	61331	.	+	.	Parent=CGI_10003954;
	scaffold40208	TRF	Tandem_Repeat	61227	61331	111	+	.	.
scaffold40208	subtractBed	intrn	78330	78371	.	+	.	Parent=CGI_10003956;
	scaffold40208	TRF	Tandem_Repeat	78330	78371	84	+	.	.
scaffold40208	subtractBed	intrn	84498	85040	.	+	.	Parent=CGI_10003956;
	scaffold40208	WUBlastX	LINE_RTE-X	84498	85040	99	+	.	.
scaffold40208	subtractBed	intrn	83545	83847	.	+	.	Parent=CGI_10003956;
	scaffold40208	WUBlastX	LINE_L1-Tx1	83545	83847	36	+	.	.
scaffold40208	subtractBed	intrn	82918	83280	.	+	.	Parent=CGI_10003956;
	scaffold40208	WUBlastX	LINE_RTE-X	82918	83280	46	+	.	.
scaffold40208	subtractBed	intrn	84495	84935	.	+	.	Parent=CGI_10003956;
	scaffold40208	WUBlastX	LINE_RTE-X	84495	84935	151	+	.	.
scaffold40208	subtractBed	intrn	85102	85359	.	+	.	Parent=CGI_10003956;
	scaffold40208	WUBlastX	LINE_RTE-X	85102	85359	114	+	.	.
scaffold40216	subtractBed	intrn	21109	21220	.	-	.	Parent=CGI_10003965;
	scaffold40216	WUBlastX	LTR_Gypsy	20987	21220	58	-	.	.
scaffold40216	subtractBed	intrn	21109	21187	.	-	.	Parent=CGI_10003965;
	scaffold40216	WUBlastX	LTR_Gypsy	20873	21187	32	-	.	.
scaffold40224	subtractBed	intrn	50939	50986	.	-	.	Parent=CGI_10003933;
	scaffold40224	TRF	Tandem_Repeat	50939	50986	96	+	.	.
scaffold40224	subtractBed	intrn	53009	53458	.	-	.	Parent=CGI_10003933;
	scaffold40224	TRF	Tandem_Repeat	53009	53458	497	+	.	.
scaffold40234	subtractBed	intrn	2023	3059	.	+	.	Parent=CGI_10003966;
	scaffold40234	TRF	Tandem_Repeat	2023	3059	1230	+	.	.
scaffold40234	subtractBed	intrn	6558	6598	.	+	.	Parent=CGI_10003966;
	scaffold40234	TRF	Tandem_Repeat	6558	6598	82	+	.	.
scaffold40234	subtractBed	intrn	11727	11758	.	+	.	Parent=CGI_10003966;
	scaffold40234	TRF	Tandem_Repeat	11727	11758	64	+	.	.
scaffold40234	subtractBed	intrn	12130	12169	.	+	.	Parent=CGI_10003966;
	scaffold40234	TRF	Tandem_Repeat	12130	12169	80	+	.	.
scaffold40234	subtractBed	intrn	28252	28794	.	+	.	Parent=CGI_10003967;
	scaffold40234	TRF	Tandem_Repeat	28252	28794	743	+	.	.
scaffold40234	subtractBed	intrn	30625	30677	.	+	.	Parent=CGI_10003967;
	scaffold40234	TRF	Tandem_Repeat	30625	30677	106	+	.	.
scaffold40234	subtractBed	intrn	44665	44920	.	-	.	Parent=CGI_10003969;
	scaffold40234	TRF	Tandem_Repeat	44665	44920	246	+	.	.
scaffold40234	subtractBed	intrn	54908	54942	.	+	.	Parent=CGI_10003970;
	scaffold40234	TRF	Tandem_Repeat	54908	54942	70	+	.	.
scaffold40234	subtractBed	intrn	54908	54942	.	-	.	Parent=CGI_10003971;
	scaffold40234	TRF	Tandem_Repeat	54908	54942	70	+	.	.
scaffold40234	subtractBed	intrn	64342	64391	.	-	.	Parent=CGI_10003971;
	scaffold40234	TRF	Tandem_Repeat	64342	64391	100	+	.	.
scaffold40234	subtractBed	intrn	65479	65531	.	-	.	Parent=CGI_10003971;
	scaffold40234	TRF	Tandem_Repeat	65479	65531	106	+	.	.
scaffold40234	subtractBed	intrn	74283	74352	.	+	.	Parent=CGI_10003972;
	scaffold40234	TRF	Tandem_Repeat	74283	74352	61	+	.	.
scaffold40234	subtractBed	intrn	74295	74433	.	+	.	Parent=CGI_10003972;
	scaffold40234	TRF	Tandem_Repeat	74295	74433	107	+	.	.
scaffold40234	subtractBed	intrn	74304	74424	.	+	.	Parent=CGI_10003972;
	scaffold40234	TRF	Tandem_Repeat	74304	74424	79	+	.	.
scaffold40246	subtractBed	intrn	12660	12750	.	-	.	Parent=CGI_10003985;
	scaffold40246	TRF	Tandem_Repeat	12660	12750	78	+	.	.
scaffold40246	subtractBed	intrn	26506	26838	.	-	.	Parent=CGI_10003986;
	scaffold40246	WUBlastX	DNA_hAT-Tip100	26506	26838	32	-	.	.
scaffold40246	subtractBed	intrn	41763	41873	.	+	.	Parent=CGI_10003987;
	scaffold40246	TRF	Tandem_Repeat	41763	41873	168	+	.	.
scaffold40246	subtractBed	intrn	58426	59707	.	-	.	Parent=CGI_10003989;
	scaffold40246	TRF	Tandem_Repeat	58426	59707	1741	+	.	.
scaffold40246	subtractBed	intrn	60651	60762	.	-	.	Parent=CGI_10003989;
	scaffold40246	TRF	Tandem_Repeat	60651	60762	165	+	.	.
scaffold40246	subtractBed	intrn	63541	63668	.	-	.	Parent=CGI_10003989;
	scaffold40246	TRF	Tandem_Repeat	63541	63668	229	+	.	.
scaffold40246	subtractBed	intrn	70621	70654	.	-	.	Parent=CGI_10003989;
	scaffold40246	TRF	Tandem_Repeat	70621	70654	68	+	.	.
scaffold40246	subtractBed	intrn	70621	70654	.	+	.	Parent=CGI_10003990;
	scaffold40246	TRF	Tandem_Repeat	70621	70654	68	+	.	.
scaffold40246	subtractBed	intrn	74731	74765	.	-	.	Parent=CGI_10003991;
	scaffold40246	TRF	Tandem_Repeat	74731	74765	56	+	.	.
scaffold40254	subtractBed	intrn	2210	2235	.	-	.	Parent=CGI_10004003;
	scaffold40254	TRF	Tandem_Repeat	2210	2235	52	+	.	.
scaffold40254	subtractBed	intrn	11496	11552	.	-	.	Parent=CGI_10004004;
	scaffold40254	TRF	Tandem_Repeat	11496	11552	114	+	.	.
scaffold40254	subtractBed	intrn	12885	13619	.	-	.	Parent=CGI_10004004;
	scaffold40254	TRF	Tandem_Repeat	12885	13619	1093	+	.	.
scaffold40254	subtractBed	intrn	20678	20721	.	-	.	Parent=CGI_10004005;
	scaffold40254	TRF	Tandem_Repeat	20678	20721	88	+	.	.
scaffold40254	subtractBed	intrn	21588	21631	.	-	.	Parent=CGI_10004005;
	scaffold40254	TRF	Tandem_Repeat	21588	21631	88	+	.	.
scaffold40254	subtractBed	intrn	53205	53248	.	+	.	Parent=CGI_10004007;
	scaffold40254	TRF	Tandem_Repeat	53205	53248	79	+	.	.
scaffold40254	subtractBed	intrn	55120	55429	.	+	.	Parent=CGI_10004007;
	scaffold40254	TRF	Tandem_Repeat	55120	55429	156	+	.	.
scaffold40254	subtractBed	intrn	55121	55412	.	+	.	Parent=CGI_10004007;
	scaffold40254	TRF	Tandem_Repeat	55121	55412	265	+	.	.
scaffold40254	subtractBed	intrn	55120	55440	.	+	.	Parent=CGI_10004007;
	scaffold40254	TRF	Tandem_Repeat	55120	55440	143	+	.	.
scaffold40264	subtractBed	intrn	13632	13699	.	+	.	Parent=CGI_10004012;
	scaffold40264	TRF	Tandem_Repeat	13632	13699	91	+	.	.
scaffold40264	subtractBed	intrn	19175	19221	.	+	.	Parent=CGI_10004012;
	scaffold40264	TRF	Tandem_Repeat	19175	19221	76	+	.	.
scaffold40264	subtractBed	intrn	38455	40999	.	+	.	Parent=CGI_10004012;
	scaffold40264	TRF	Tandem_Repeat	38455	40999	3779	+	.	.
scaffold40264	subtractBed	intrn	49437	49472	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_L1	49437	49472	20	-	.	.
scaffold40264	subtractBed	intrn	51777	52571	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_Proto2	51777	52571	29	-	.	.
scaffold40264	subtractBed	intrn	51354	52400	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_Proto2	51354	52400	157	-	.	.
scaffold40264	subtractBed	intrn	49754	51316	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_RTE-X	49754	51316	413	-	.	.
scaffold40264	subtractBed	intrn	49499	51058	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_CR1	49499	51058	201	-	.	.
scaffold40264	subtractBed	intrn	49718	51625	.	+	.	Parent=CGI_10004012;
	scaffold40264	WUBlastX	LINE_L2	49718	51625	176	-	.	.
scaffold40264	subtractBed	intrn	70895	70939	.	+	.	Parent=CGI_10004014;
	scaffold40264	TRF	Tandem_Repeat	70895	70939	90	+	.	.
scaffold40264	subtractBed	intrn	71241	71479	.	+	.	Parent=CGI_10004014;
	scaffold40264	TRF	Tandem_Repeat	71241	71479	253	+	.	.
scaffold40270	subtractBed	intrn	41552	41599	.	-	.	Parent=CGI_10003993;
	scaffold40270	TRF	Tandem_Repeat	41552	41599	55	+	.	.
scaffold40270	subtractBed	intrn	56778	56804	.	-	.	Parent=CGI_10003994;
	scaffold40270	TRF	Tandem_Repeat	56778	56804	54	+	.	.
scaffold40270	subtractBed	intrn	70026	70336	.	-	.	Parent=CGI_10003994;
	scaffold40270	TRF	Tandem_Repeat	70026	70336	132	+	.	.
scaffold40270	subtractBed	intrn	70026	70336	.	-	.	Parent=CGI_10003994;
	scaffold40270	TRF	Tandem_Repeat	70026	70336	132	+	.	.
scaffold40282	subtractBed	intrn	31876	31902	.	+	.	Parent=CGI_10004001;
	scaffold40282	TRF	Tandem_Repeat	31876	31902	54	+	.	.
scaffold40282	subtractBed	intrn	31939	32229	.	+	.	Parent=CGI_10004001;
	scaffold40282	WUBlastX	LTR_Gypsy	31939	32229	84	+	.	.
scaffold40282	subtractBed	intrn	30930	30983	.	+	.	Parent=CGI_10004001;
	scaffold40282	WUBlastX	LTR_Gypsy	30930	30983	39	+	.	.
scaffold40282	subtractBed	intrn	30547	30954	.	+	.	Parent=CGI_10004001;
	scaffold40282	WUBlastX	LTR_Gypsy	30547	30954	115	+	.	.
scaffold40282	subtractBed	intrn	59396	59462	.	+	.	Parent=CGI_10004002;
	scaffold40282	TRF	Tandem_Repeat	59396	59462	116	+	.	.
scaffold40282	subtractBed	intrn	75595	76158	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	75595	76158	154	-	.	.
scaffold40282	subtractBed	intrn	75953	76456	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	75953	76456	27	-	.	.
scaffold40282	subtractBed	intrn	74222	75085	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	74222	75085	233	-	.	.
scaffold40282	subtractBed	intrn	77290	77700	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	77290	77700	44	-	.	.
scaffold40282	subtractBed	intrn	73847	74188	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	73847	74188	100	-	.	.
scaffold40282	subtractBed	intrn	73114	73437	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	73114	73437	186	-	.	.
scaffold40282	subtractBed	intrn	75712	76014	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy-Gmr1	75712	76014	248	-	.	.
scaffold40282	subtractBed	intrn	73192	73506	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	73192	73506	163	-	.	.
scaffold40282	subtractBed	intrn	76310	77272	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	76310	77272	135	-	.	.
scaffold40282	subtractBed	intrn	77290	77616	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	77290	77616	70	-	.	.
scaffold40282	subtractBed	intrn	76007	76216	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	76007	76216	46	-	.	.
scaffold40282	subtractBed	intrn	73961	74791	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	73961	74791	222	-	.	.
scaffold40282	subtractBed	intrn	73216	73563	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	73216	73563	108	-	.	.
scaffold40282	subtractBed	intrn	74180	74785	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	74180	74785	240	-	.	.
scaffold40282	subtractBed	intrn	75081	75707	.	+	.	Parent=CGI_10004002;
	scaffold40282	WUBlastX	LTR_Gypsy	75081	75707	447	-	.	.
scaffold40290	subtractBed	intrn	7655	8518	.	+	.	Parent=CGI_10004018;
	scaffold40290	WUBlastX	LINE_RTE-X	7655	8518	202	-	.	.
scaffold40290	subtractBed	intrn	8485	8538	.	+	.	Parent=CGI_10004018;
	scaffold40290	WUBlastX	LINE_RTE-X	8485	8538	28	-	.	.
scaffold40346	subtractBed	intrn	28083	28115	.	-	.	Parent=CGI_10004041;
	scaffold40346	TRF	Tandem_Repeat	28083	28115	57	+	.	.
scaffold40346	subtractBed	intrn	28648	28709	.	-	.	Parent=CGI_10004041;
	scaffold40346	TRF	Tandem_Repeat	28648	28709	70	+	.	.
scaffold40346	subtractBed	intrn	23940	24869	.	-	.	Parent=CGI_10004041;
	scaffold40346	WUBlastX	DNA_TcMar-Tc1	23940	24869	258	-	.	.
scaffold40346	subtractBed	intrn	25241	25453	.	-	.	Parent=CGI_10004041;
	scaffold40346	WUBlastX	LINE_L1-Tx1	25241	25453	40	+	.	.
scaffold40346	subtractBed	intrn	24273	25001	.	-	.	Parent=CGI_10004041;
	scaffold40346	WUBlastX	DNA_TcMar-Tc1	24273	25001	114	-	.	.
scaffold40368	subtractBed	intrn	6062	6126	.	+	.	Parent=CGI_10004043;
	scaffold40368	TRF	Tandem_Repeat	6062	6126	130	+	.	.
scaffold40368	subtractBed	intrn	5300	5653	.	+	.	Parent=CGI_10004043;
	scaffold40368	WUBlastX	LINE_Penelope	5300	5653	126	-	.	.
scaffold40368	subtractBed	intrn	8934	9048	.	+	.	Parent=CGI_10004043;
	scaffold40368	TRF	Tandem_Repeat	8934	9048	230	+	.	.
scaffold40380	subtractBed	intrn	1917	1960	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	1917	1960	79	+	.	.
scaffold40380	subtractBed	intrn	4206	4237	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	4206	4237	55	+	.	.
scaffold40380	subtractBed	intrn	4268	5045	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	4268	5045	1130	+	.	.
scaffold40380	subtractBed	intrn	9802	9845	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	9802	9845	88	+	.	.
scaffold40380	subtractBed	intrn	20550	21054	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	20550	21054	326	+	.	.
scaffold40380	subtractBed	intrn	20940	21127	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	20940	21127	187	+	.	.
scaffold40380	subtractBed	intrn	20547	20847	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	20547	20847	239	+	.	.
scaffold40380	subtractBed	intrn	33721	34164	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	33721	34164	395	+	.	.
scaffold40380	subtractBed	intrn	33692	34193	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	33692	34193	468	+	.	.
scaffold40380	subtractBed	intrn	34024	34239	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	34024	34239	94	+	.	.
scaffold40380	subtractBed	intrn	33956	34277	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	33956	34277	205	+	.	.
scaffold40380	subtractBed	intrn	35022	35155	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	35022	35155	110	+	.	.
scaffold40380	subtractBed	intrn	36201	36299	.	+	.	Parent=CGI_10004069;
	scaffold40380	TRF	Tandem_Repeat	36201	36299	90	+	.	.
scaffold40380	subtractBed	intrn	84626	84742	.	-	.	Parent=CGI_10004072;
	scaffold40380	TRF	Tandem_Repeat	84626	84742	83	+	.	.
scaffold40388	subtractBed	intrn	16936	17109	.	-	.	Parent=CGI_10004075;
	scaffold40388	WUBlastX	LTR_DIRS	16936	17109	21	-	.	.
scaffold40388	subtractBed	intrn	24822	24876	.	-	.	Parent=CGI_10004076;
	scaffold40388	TRF	Tandem_Repeat	24822	24876	110	+	.	.
scaffold40388	subtractBed	intrn	26882	26932	.	-	.	Parent=CGI_10004076;
	scaffold40388	TRF	Tandem_Repeat	26882	26932	102	+	.	.
scaffold40388	subtractBed	intrn	29546	29597	.	-	.	Parent=CGI_10004076;
	scaffold40388	TRF	Tandem_Repeat	29546	29597	104	+	.	.
scaffold40388	subtractBed	intrn	34009	34069	.	-	.	Parent=CGI_10004076;
	scaffold40388	TRF	Tandem_Repeat	34009	34069	58	+	.	.
scaffold40388	subtractBed	intrn	34000	34057	.	-	.	Parent=CGI_10004076;
	scaffold40388	TRF	Tandem_Repeat	34000	34057	64	+	.	.
scaffold40388	subtractBed	intrn	65298	65347	.	-	.	Parent=CGI_10004078;
	scaffold40388	TRF	Tandem_Repeat	65298	65347	57	+	.	.
scaffold40390	subtractBed	intrn	33320	33345	.	+	.	Parent=CGI_10004050;
	scaffold40390	TRF	Tandem_Repeat	33320	33345	52	+	.	.
scaffold40390	subtractBed	intrn	33609	33644	.	+	.	Parent=CGI_10004050;
	scaffold40390	TRF	Tandem_Repeat	33609	33644	72	+	.	.
scaffold40390	subtractBed	intrn	64939	64979	.	-	.	Parent=CGI_10004053;
	scaffold40390	TRF	Tandem_Repeat	64939	64979	82	+	.	.
scaffold40396	subtractBed	intrn	2212	2340	.	-	.	Parent=CGI_10004066;
	scaffold40396	WUBlastX	LINE_Penelope	2146	2340	29	-	.	.
scaffold40396	subtractBed	intrn	13792	13847	.	-	.	Parent=CGI_10004066;
	scaffold40396	TRF	Tandem_Repeat	13792	13847	112	+	.	.
scaffold40396	subtractBed	intrn	22651	22742	.	-	.	Parent=CGI_10004066;
	scaffold40396	TRF	Tandem_Repeat	22651	22742	116	+	.	.
scaffold404	subtractBed	intrn	75606	76372	.	-	.	Parent=CGI_10013603;
	scaffold404	TRF	Tandem_Repeat	75606	76372	992	+	.	.
scaffold404	subtractBed	intrn	77820	78518	.	-	.	Parent=CGI_10013603;
	scaffold404	WUBlastX	LINE_L1-Tx1	77820	78518	68	+	.	.
scaffold404	subtractBed	intrn	122048	122091	.	+	.	Parent=CGI_10013604;
	scaffold404	TRF	Tandem_Repeat	122048	122091	88	+	.	.
scaffold404	subtractBed	intrn	321313	321340	.	-	.	Parent=CGI_10013607;
	scaffold404	TRF	Tandem_Repeat	321313	321340	56	+	.	.
scaffold404	subtractBed	intrn	322978	323915	.	-	.	Parent=CGI_10013607;
	scaffold404	TRF	Tandem_Repeat	322978	323915	1074	+	.	.
scaffold404	subtractBed	intrn	324225	324267	.	-	.	Parent=CGI_10013607;
	scaffold404	TRF	Tandem_Repeat	324225	324267	59	+	.	.
scaffold404	subtractBed	intrn	324319	324408	.	-	.	Parent=CGI_10013607;
	scaffold404	TRF	Tandem_Repeat	324319	324408	61	+	.	.
scaffold404	subtractBed	intrn	318413	318616	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	318413	318616	75	+	.	.
scaffold404	subtractBed	intrn	318644	318871	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	318644	318871	61	+	.	.
scaffold404	subtractBed	intrn	320633	320692	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	320633	320692	26	+	.	.
scaffold404	subtractBed	intrn	317796	318140	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	317796	318140	168	+	.	.
scaffold404	subtractBed	intrn	318101	318646	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	318101	318646	34	+	.	.
scaffold404	subtractBed	intrn	320698	320841	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	320698	320841	54	+	.	.
scaffold404	subtractBed	intrn	320331	320609	.	-	.	Parent=CGI_10013607;
	scaffold404	WUBlastX	LTR_DIRS	320331	320609	36	+	.	.
scaffold404	subtractBed	intrn	326413	326463	.	-	.	Parent=CGI_10013607;
	scaffold404	TRF	Tandem_Repeat	326413	326463	102	+	.	.
scaffold404	subtractBed	intrn	345301	345540	.	-	.	Parent=CGI_10013608;
	scaffold404	TRF	Tandem_Repeat	345301	345540	261	+	.	.
scaffold40404	subtractBed	intrn	64079	64117	.	-	.	Parent=CGI_10004086;
	scaffold40404	TRF	Tandem_Repeat	64079	64117	78	+	.	.
scaffold40404	subtractBed	intrn	64880	66388	.	-	.	Parent=CGI_10004086;
	scaffold40404	TRF	Tandem_Repeat	64880	66388	2065	+	.	.
scaffold40404	subtractBed	intrn	70170	70208	.	-	.	Parent=CGI_10004086;
	scaffold40404	TRF	Tandem_Repeat	70170	70208	55	+	.	.
scaffold40404	subtractBed	intrn	72442	72864	.	-	.	Parent=CGI_10004086;
	scaffold40404	TRF	Tandem_Repeat	72442	72864	632	+	.	.
scaffold40404	subtractBed	intrn	73805	73901	.	-	.	Parent=CGI_10004086;
	scaffold40404	TRF	Tandem_Repeat	73805	73901	74	+	.	.
scaffold40406	subtractBed	intrn	20211	20279	.	-	.	Parent=CGI_10004031;
	scaffold40406	TRF	Tandem_Repeat	20211	20279	93	+	.	.
scaffold40406	subtractBed	intrn	41848	41901	.	-	.	Parent=CGI_10004032;
	scaffold40406	TRF	Tandem_Repeat	41848	41901	108	+	.	.
scaffold40412	subtractBed	intrn	9466	9624	.	-	.	Parent=CGI_10004112;
	scaffold40412	WUBlastX	DNA_Harbinger	9466	9624	51	-	.	.
scaffold40412	subtractBed	intrn	7174	7386	.	-	.	Parent=CGI_10004112;
	scaffold40412	WUBlastX	DNA_Harbinger	7174	7386	69	+	.	.
scaffold40412	subtractBed	intrn	82406	82450	.	+	.	Parent=CGI_10004114;
	scaffold40412	TRF	Tandem_Repeat	82406	82450	90	+	.	.
scaffold40412	subtractBed	intrn	82661	83550	.	+	.	Parent=CGI_10004114;
	scaffold40412	TRF	Tandem_Repeat	82661	83550	1359	+	.	.
scaffold40412	subtractBed	intrn	82406	82450	.	-	.	Parent=CGI_10004115;
	scaffold40412	TRF	Tandem_Repeat	82406	82450	90	+	.	.
scaffold40412	subtractBed	intrn	82661	83550	.	-	.	Parent=CGI_10004115;
	scaffold40412	TRF	Tandem_Repeat	82661	83550	1359	+	.	.
scaffold40420	subtractBed	intrn	7131	7174	.	-	.	Parent=CGI_10004096;
	scaffold40420	TRF	Tandem_Repeat	7131	7174	88	+	.	.
scaffold40420	subtractBed	intrn	33180	34213	.	+	.	Parent=CGI_10004097;
	scaffold40420	TRF	Tandem_Repeat	33180	34213	924	+	.	.
scaffold40420	subtractBed	intrn	41003	41650	.	-	.	Parent=CGI_10004098;
	scaffold40420	WUBlastX	LINE_CR1	41003	41650	93	+	.	.
scaffold40420	subtractBed	intrn	41003	41326	.	-	.	Parent=CGI_10004098;
	scaffold40420	WUBlastX	LINE_CR1	41003	41326	149	+	.	.
scaffold40420	subtractBed	intrn	50273	50309	.	+	.	Parent=CGI_10004099;
	scaffold40420	TRF	Tandem_Repeat	50273	50309	74	+	.	.
scaffold40424	subtractBed	intrn	26286	26483	.	-	.	Parent=CGI_10004127;
	scaffold40424	WUBlastX	DNA_Sola	26286	26483	126	-	.	.
scaffold40424	subtractBed	intrn	25032	25325	.	-	.	Parent=CGI_10004127;
	scaffold40424	WUBlastX	DNA_Sola	25032	25325	119	-	.	.
scaffold40424	subtractBed	intrn	26807	27022	.	-	.	Parent=CGI_10004127;
	scaffold40424	WUBlastX	DNA_Sola	26807	27022	59	-	.	.
scaffold40424	subtractBed	intrn	25065	25292	.	-	.	Parent=CGI_10004127;
	scaffold40424	WUBlastX	DNA_Sola	25065	25292	160	-	.	.
scaffold40424	subtractBed	intrn	28065	28121	.	-	.	Parent=CGI_10004127;
	scaffold40424	TRF	Tandem_Repeat	28065	28121	51	+	.	.
scaffold40424	subtractBed	intrn	29559	29603	.	-	.	Parent=CGI_10004127;
	scaffold40424	TRF	Tandem_Repeat	29559	29603	90	+	.	.
scaffold40424	subtractBed	intrn	41556	41634	.	-	.	Parent=CGI_10004127;
	scaffold40424	TRF	Tandem_Repeat	41556	41634	158	+	.	.
scaffold40438	subtractBed	intrn	66011	66726	.	+	.	Parent=CGI_10004081;
	scaffold40438	TRF	Tandem_Repeat	66011	66726	887	+	.	.
scaffold40438	subtractBed	intrn	76737	76768	.	+	.	Parent=CGI_10004081;
	scaffold40438	TRF	Tandem_Repeat	76737	76768	64	+	.	.
scaffold40438	subtractBed	intrn	79724	79766	.	+	.	Parent=CGI_10004081;
	scaffold40438	TRF	Tandem_Repeat	79724	79766	86	+	.	.
scaffold40438	subtractBed	intrn	80077	80103	.	+	.	Parent=CGI_10004081;
	scaffold40438	TRF	Tandem_Repeat	80077	80103	54	+	.	.
scaffold40440	subtractBed	intrn	21243	21376	.	+	.	Parent=CGI_10004142;
	scaffold40440	TRF	Tandem_Repeat	21243	21376	119	+	.	.
scaffold40440	subtractBed	intrn	22387	22503	.	+	.	Parent=CGI_10004142;
	scaffold40440	TRF	Tandem_Repeat	22387	22503	118	+	.	.
scaffold40440	subtractBed	intrn	22997	23024	.	+	.	Parent=CGI_10004142;
	scaffold40440	TRF	Tandem_Repeat	22997	23024	56	+	.	.
scaffold40440	subtractBed	intrn	34274	35053	.	+	.	Parent=CGI_10004142;
	scaffold40440	WUBlastX	LTR_Gypsy-Cigr	34274	35053	166	-	.	.
scaffold40440	subtractBed	intrn	33435	34165	.	+	.	Parent=CGI_10004142;
	scaffold40440	WUBlastX	LTR_Gypsy	33215	34165	83	-	.	.
scaffold40440	subtractBed	intrn	33644	34804	.	+	.	Parent=CGI_10004142;
	scaffold40440	WUBlastX	LTR_Gypsy	33644	34804	136	-	.	.
scaffold40440	subtractBed	intrn	34508	35182	.	+	.	Parent=CGI_10004142;
	scaffold40440	WUBlastX	LTR_Gypsy	34508	35182	70	-	.	.
scaffold40440	subtractBed	intrn	57141	57181	.	-	.	Parent=CGI_10004144;
	scaffold40440	TRF	Tandem_Repeat	57141	57181	82	+	.	.
scaffold40440	subtractBed	intrn	54722	55012	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	54722	55012	34	+	.	.
scaffold40440	subtractBed	intrn	54737	55063	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	54737	55063	24	+	.	.
scaffold40440	subtractBed	intrn	55240	55485	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	55240	55485	71	+	.	.
scaffold40440	subtractBed	intrn	51469	52263	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	51469	52263	353	+	.	.
scaffold40440	subtractBed	intrn	52314	52529	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	52314	52529	63	+	.	.
scaffold40440	subtractBed	intrn	52511	52627	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	52511	52627	20	+	.	.
scaffold40440	subtractBed	intrn	54782	54988	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	54782	54988	56	+	.	.
scaffold40440	subtractBed	intrn	52260	52532	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_DIRS	52260	52532	23	+	.	.
scaffold40440	subtractBed	intrn	52939	53352	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LINE_Penelope	52939	53352	59	+	.	.
scaffold40440	subtractBed	intrn	54746	54973	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LTR_Ngaro	54746	54973	54	+	.	.
scaffold40440	subtractBed	intrn	54428	54544	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LINE_Penelope	54428	54544	32	+	.	.
scaffold40440	subtractBed	intrn	53023	54330	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LINE_Penelope	53023	54330	262	+	.	.
scaffold40440	subtractBed	intrn	54413	54550	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LINE_Penelope	54413	54550	28	+	.	.
scaffold40440	subtractBed	intrn	53950	54405	.	-	.	Parent=CGI_10004144;
	scaffold40440	WUBlastX	LINE_Penelope	53950	54405	33	+	.	.
scaffold40440	subtractBed	intrn	60085	60147	.	-	.	Parent=CGI_10004144;
	scaffold40440	TRF	Tandem_Repeat	60085	60147	117	+	.	.
scaffold40440	subtractBed	intrn	60833	61837	.	-	.	Parent=CGI_10004144;
	scaffold40440	TRF	Tandem_Repeat	60833	61837	1475	+	.	.
scaffold40440	subtractBed	intrn	62457	62496	.	-	.	Parent=CGI_10004144;
	scaffold40440	TRF	Tandem_Repeat	62457	62496	80	+	.	.
scaffold40440	subtractBed	intrn	62993	63048	.	-	.	Parent=CGI_10004144;
	scaffold40440	TRF	Tandem_Repeat	62993	63048	112	+	.	.
scaffold40440	subtractBed	intrn	60085	60147	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	60085	60147	117	+	.	.
scaffold40440	subtractBed	intrn	60833	61837	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	60833	61837	1475	+	.	.
scaffold40440	subtractBed	intrn	62457	62496	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	62457	62496	80	+	.	.
scaffold40440	subtractBed	intrn	62993	63048	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	62993	63048	112	+	.	.
scaffold40440	subtractBed	intrn	75227	75276	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	75227	75276	100	+	.	.
scaffold40440	subtractBed	intrn	79806	79857	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	79806	79857	95	+	.	.
scaffold40440	subtractBed	intrn	81467	81538	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	81467	81538	99	+	.	.
scaffold40440	subtractBed	intrn	82325	82351	.	+	.	Parent=CGI_10004145;
	scaffold40440	TRF	Tandem_Repeat	82325	82351	54	+	.	.
scaffold40440	subtractBed	intrn	75227	75276	.	-	.	Parent=CGI_10004146;
	scaffold40440	TRF	Tandem_Repeat	75227	75276	100	+	.	.
scaffold40440	subtractBed	intrn	79806	79857	.	-	.	Parent=CGI_10004146;
	scaffold40440	TRF	Tandem_Repeat	79806	79857	95	+	.	.
scaffold40440	subtractBed	intrn	81467	81538	.	-	.	Parent=CGI_10004146;
	scaffold40440	TRF	Tandem_Repeat	81467	81538	99	+	.	.
scaffold40440	subtractBed	intrn	82325	82351	.	-	.	Parent=CGI_10004146;
	scaffold40440	TRF	Tandem_Repeat	82325	82351	54	+	.	.
scaffold40442	subtractBed	intrn	54398	54527	.	-	.	Parent=CGI_10004109;
	scaffold40442	TRF	Tandem_Repeat	54398	54527	156	+	.	.
scaffold40442	subtractBed	intrn	54392	54510	.	-	.	Parent=CGI_10004109;
	scaffold40442	TRF	Tandem_Repeat	54392	54510	80	+	.	.
scaffold40454	subtractBed	intrn	44919	44967	.	+	.	Parent=CGI_10004118;
	scaffold40454	TRF	Tandem_Repeat	44919	44967	62	+	.	.
scaffold40454	subtractBed	intrn	44917	44965	.	+	.	Parent=CGI_10004118;
	scaffold40454	TRF	Tandem_Repeat	44917	44965	71	+	.	.
scaffold40454	subtractBed	intrn	80258	80334	.	+	.	Parent=CGI_10004121;
	scaffold40454	TRF	Tandem_Repeat	80258	80334	93	+	.	.
scaffold40454	subtractBed	intrn	83456	83626	.	-	.	Parent=CGI_10004122;
	scaffold40454	WUBlastX	LINE_RTE-BovB	83456	83626	37	+	.	.
scaffold40454	subtractBed	intrn	83385	83617	.	-	.	Parent=CGI_10004122;
	scaffold40454	WUBlastX	LINE_RTE-BovB	83168	83617	33	+	.	.
scaffold40454	subtractBed	intrn	85794	86804	.	-	.	Parent=CGI_10004122;
	scaffold40454	WUBlastX	DNA_TcMar-Tc1	85794	86804	212	-	.	.
scaffold40456	subtractBed	intrn	34676	35164	.	+	.	Parent=CGI_10004088;
	scaffold40456	TRF	Tandem_Repeat	34676	35164	726	+	.	.
scaffold40456	subtractBed	intrn	43751	44016	.	+	.	Parent=CGI_10004088;
	scaffold40456	TRF	Tandem_Repeat	43748	44016	79	+	.	.
scaffold40456	subtractBed	intrn	43866	44031	.	+	.	Parent=CGI_10004088;
	scaffold40456	TRF	Tandem_Repeat	43866	44031	165	+	.	.
scaffold40456	subtractBed	intrn	43865	44031	.	+	.	Parent=CGI_10004088;
	scaffold40456	TRF	Tandem_Repeat	43865	44031	183	+	.	.
scaffold40456	subtractBed	intrn	34676	35164	.	-	.	Parent=CGI_10004089;
	scaffold40456	TRF	Tandem_Repeat	34676	35164	726	+	.	.
scaffold40456	subtractBed	intrn	74874	75118	.	+	.	Parent=CGI_10004091;
	scaffold40456	TRF	Tandem_Repeat	74874	75118	151	+	.	.
scaffold40456	subtractBed	intrn	79521	79674	.	+	.	Parent=CGI_10004091;
	scaffold40456	TRF	Tandem_Repeat	79521	79674	164	+	.	.
scaffold40492	subtractBed	intrn	7471	7500	.	-	.	Parent=CGI_10004188;
	scaffold40492	TRF	Tandem_Repeat	7471	7500	60	+	.	.
scaffold40512	subtractBed	intrn	34650	34699	.	+	.	Parent=CGI_10004193;
	scaffold40512	TRF	Tandem_Repeat	34650	34699	75	+	.	.
scaffold40512	subtractBed	intrn	36107	37031	.	+	.	Parent=CGI_10004193;
	scaffold40512	TRF	Tandem_Repeat	36107	37031	1223	+	.	.
scaffold40512	subtractBed	intrn	43477	43569	.	+	.	Parent=CGI_10004193;
	scaffold40512	TRF	Tandem_Repeat	43477	43569	159	+	.	.
scaffold40512	subtractBed	intrn	50930	51472	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	50930	51472	91	+	.	.
scaffold40512	subtractBed	intrn	52153	52719	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	52153	52719	189	+	.	.
scaffold40512	subtractBed	intrn	51587	51757	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	51587	51757	31	+	.	.
scaffold40512	subtractBed	intrn	53550	53891	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	53550	54464	446	-	.	.
scaffold40512	subtractBed	intrn	51632	51919	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	51632	51919	53	+	.	.
scaffold40512	subtractBed	intrn	55381	55599	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_Kolobok-IS4	55381	55599	68	-	.	.
scaffold40512	subtractBed	intrn	54429	54464	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	53550	54464	446	-	.	.
scaffold40512	subtractBed	intrn	55327	55611	.	+	.	Parent=CGI_10004193;
	scaffold40512	WUBlastX	DNA_IS4EU	55327	55611	46	-	.	.
scaffold40514	subtractBed	intrn	37435	37543	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	37435	37543	134	+	.	.
scaffold40514	subtractBed	intrn	37820	38483	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	37820	38483	436	+	.	.
scaffold40514	subtractBed	intrn	38496	38897	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	38496	38897	561	+	.	.
scaffold40514	subtractBed	intrn	38496	38897	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	38496	38897	566	+	.	.
scaffold40514	subtractBed	intrn	40266	40512	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	40266	40512	286	+	.	.
scaffold40514	subtractBed	intrn	40699	40804	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	40699	40804	106	+	.	.
scaffold40514	subtractBed	intrn	42198	42247	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	42198	42247	86	+	.	.
scaffold40514	subtractBed	intrn	42390	43513	.	-	.	Parent=CGI_10004131;
	scaffold40514	TRF	Tandem_Repeat	42390	43566	2264	+	.	.
scaffold40514	subtractBed	intrn	52880	53087	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	52880	53087	211	+	.	.
scaffold40514	subtractBed	intrn	53253	53551	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	53253	53551	311	+	.	.
scaffold40514	subtractBed	intrn	53253	53787	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	53253	53787	405	+	.	.
scaffold40514	subtractBed	intrn	53253	53787	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	53253	53787	452	+	.	.
scaffold40514	subtractBed	intrn	53558	53745	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	53558	53745	153	+	.	.
scaffold40514	subtractBed	intrn	55192	56053	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	55192	56053	1170	+	.	.
scaffold40514	subtractBed	intrn	60931	61242	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	60931	61260	574	+	.	.
scaffold40514	subtractBed	intrn	60862	61242	.	+	.	Parent=CGI_10004132;
	scaffold40514	TRF	Tandem_Repeat	60862	61260	600	+	.	.
scaffold40514	subtractBed	intrn	82549	82601	.	-	.	Parent=CGI_10004134;
	scaffold40514	TRF	Tandem_Repeat	82549	82601	106	+	.	.
scaffold40526	subtractBed	intrn	16667	16707	.	+	.	Parent=CGI_10004196;
	scaffold40526	TRF	Tandem_Repeat	16667	16707	57	+	.	.
scaffold40526	subtractBed	intrn	18554	18596	.	+	.	Parent=CGI_10004196;
	scaffold40526	TRF	Tandem_Repeat	18554	18596	59	+	.	.
scaffold40526	subtractBed	intrn	18548	18596	.	+	.	Parent=CGI_10004196;
	scaffold40526	TRF	Tandem_Repeat	18548	18596	73	+	.	.
scaffold40548	subtractBed	intrn	25668	25724	.	+	.	Parent=CGI_10004176;
	scaffold40548	TRF	Tandem_Repeat	25668	25724	114	+	.	.
scaffold40548	subtractBed	intrn	63407	63660	.	-	.	Parent=CGI_10004178;
	scaffold40548	TRF	Tandem_Repeat	63407	63660	333	+	.	.
scaffold40548	subtractBed	intrn	92554	92610	.	+	.	Parent=CGI_10004181;
	scaffold40548	TRF	Tandem_Repeat	92554	92610	73	+	.	.
scaffold40556	subtractBed	intrn	11214	11372	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Ngaro	11214	11372	79	-	.	.
scaffold40556	subtractBed	intrn	12230	12841	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Gypsy	12230	12841	170	+	.	.
scaffold40556	subtractBed	intrn	11414	11701	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Ngaro	11414	11701	87	-	.	.
scaffold40556	subtractBed	intrn	12323	12913	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Gypsy	12323	12913	309	+	.	.
scaffold40556	subtractBed	intrn	11614	11856	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Ngaro	11614	11856	76	-	.	.
scaffold40556	subtractBed	intrn	10204	10968	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Ngaro	10204	10968	248	-	.	.
scaffold40556	subtractBed	intrn	12849	13145	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Gypsy-Cigr	12849	13145	49	+	.	.
scaffold40556	subtractBed	intrn	11417	11611	.	-	.	Parent=CGI_10004250;
	scaffold40556	WUBlastX	LTR_Ngaro	11417	11611	108	-	.	.
scaffold40556	subtractBed	intrn	26179	26264	.	+	.	Parent=CGI_10004251;
	scaffold40556	TRF	Tandem_Repeat	26179	26264	91	+	.	.
scaffold40556	subtractBed	intrn	26329	26465	.	+	.	Parent=CGI_10004251;
	scaffold40556	TRF	Tandem_Repeat	26329	26465	125	+	.	.
scaffold40556	subtractBed	intrn	26564	26716	.	+	.	Parent=CGI_10004251;
	scaffold40556	TRF	Tandem_Repeat	26564	26716	189	+	.	.
scaffold40556	subtractBed	intrn	26790	26877	.	+	.	Parent=CGI_10004251;
	scaffold40556	TRF	Tandem_Repeat	26790	26877	90	+	.	.
scaffold40556	subtractBed	intrn	29861	30074	.	+	.	Parent=CGI_10004251;
	scaffold40556	TRF	Tandem_Repeat	29861	30074	254	+	.	.
scaffold40560	subtractBed	intrn	45605	45674	.	-	.	Parent=CGI_10004229;
	scaffold40560	TRF	Tandem_Repeat	45605	45674	140	+	.	.
scaffold40560	subtractBed	intrn	58493	58538	.	-	.	Parent=CGI_10004230;
	scaffold40560	TRF	Tandem_Repeat	58493	58538	92	+	.	.
scaffold40560	subtractBed	intrn	56407	56508	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	56407	56508	79	+	.	.
scaffold40560	subtractBed	intrn	56261	56407	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	56261	56407	45	+	.	.
scaffold40560	subtractBed	intrn	55649	55960	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	55649	55960	86	+	.	.
scaffold40560	subtractBed	intrn	56407	56529	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	56407	56529	63	+	.	.
scaffold40560	subtractBed	intrn	57072	57326	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	57072	57326	190	+	.	.
scaffold40560	subtractBed	intrn	58070	58294	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	58070	58294	47	+	.	.
scaffold40560	subtractBed	intrn	60461	60491	.	-	.	Parent=CGI_10004230;
	scaffold40560	TRF	Tandem_Repeat	60461	60491	55	+	.	.
scaffold40560	subtractBed	intrn	59483	59593	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	59483	59593	67	-	.	.
scaffold40560	subtractBed	intrn	60566	60706	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	60566	60706	58	-	.	.
scaffold40560	subtractBed	intrn	60566	60757	.	-	.	Parent=CGI_10004230;
	scaffold40560	WUBlastX	DNA_Harbinger	60566	60757	39	-	.	.
scaffold40564	subtractBed	intrn	4889	5140	.	+	.	Parent=CGI_10004206;
	scaffold40564	WUBlastX	DNA_Harbinger	4889	5140	76	+	.	.
scaffold40564	subtractBed	intrn	9689	9752	.	+	.	Parent=CGI_10004207;
	scaffold40564	TRF	Tandem_Repeat	9689	9752	58	+	.	.
scaffold40564	subtractBed	intrn	8514	9380	.	+	.	Parent=CGI_10004207;
	scaffold40564	WUBlastX	LINE_L1	8514	9380	222	+	.	.
scaffold40564	subtractBed	intrn	7416	7808	.	+	.	Parent=CGI_10004207;
	scaffold40564	WUBlastX	LINE_L1-Tx1	7416	7808	78	+	.	.
scaffold40564	subtractBed	intrn	8342	8851	.	+	.	Parent=CGI_10004207;
	scaffold40564	WUBlastX	LINE_L1	8342	8851	34	+	.	.
scaffold40564	subtractBed	intrn	8889	9605	.	+	.	Parent=CGI_10004207;
	scaffold40564	WUBlastX	LINE_L1	8889	9605	184	+	.	.
scaffold40564	subtractBed	intrn	10046	10123	.	+	.	Parent=CGI_10004207;
	scaffold40564	WUBlastX	LINE_DRE	10046	10123	23	+	.	.
scaffold40564	subtractBed	intrn	22935	22985	.	+	.	Parent=CGI_10004207;
	scaffold40564	TRF	Tandem_Repeat	22935	22985	102	+	.	.
scaffold40564	subtractBed	intrn	34682	34730	.	-	.	Parent=CGI_10004208;
	scaffold40564	TRF	Tandem_Repeat	34682	34730	98	+	.	.
scaffold40564	subtractBed	intrn	46309	46402	.	-	.	Parent=CGI_10004208;
	scaffold40564	TRF	Tandem_Repeat	46309	46402	84	+	.	.
scaffold40564	subtractBed	intrn	65907	65956	.	-	.	Parent=CGI_10004209;
	scaffold40564	TRF	Tandem_Repeat	65907	65956	100	+	.	.
scaffold40564	subtractBed	intrn	66012	66063	.	-	.	Parent=CGI_10004209;
	scaffold40564	TRF	Tandem_Repeat	66012	66063	104	+	.	.
scaffold40584	subtractBed	intrn	40060	40305	.	+	.	Parent=CGI_10004249;
	scaffold40584	TRF	Tandem_Repeat	40060	40305	77	+	.	.
scaffold40584	subtractBed	intrn	58457	59029	.	+	.	Parent=CGI_10004249;
	scaffold40584	WUBlastX	LINE_L1-Tx1	58457	59029	129	+	.	.
scaffold40584	subtractBed	intrn	58430	58894	.	+	.	Parent=CGI_10004249;
	scaffold40584	WUBlastX	LINE_CR1	58430	58894	133	+	.	.
scaffold406	subtractBed	intrn	11652	11745	.	+	.	Parent=CGI_10023838;
	scaffold406	TRF	Tandem_Repeat	11652	11745	118	+	.	.
scaffold406	subtractBed	intrn	12136	12186	.	+	.	Parent=CGI_10023838;
	scaffold406	TRF	Tandem_Repeat	12136	12186	66	+	.	.
scaffold406	subtractBed	intrn	13302	13387	.	+	.	Parent=CGI_10023838;
	scaffold406	TRF	Tandem_Repeat	13302	13387	97	+	.	.
scaffold406	subtractBed	intrn	19400	19431	.	+	.	Parent=CGI_10023838;
	scaffold406	TRF	Tandem_Repeat	19400	19431	64	+	.	.
scaffold406	subtractBed	intrn	30774	30838	.	+	.	Parent=CGI_10023838;
	scaffold406	TRF	Tandem_Repeat	30774	30838	121	+	.	.
scaffold406	subtractBed	intrn	63392	63904	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	63392	63904	503	-	.	.
scaffold406	subtractBed	intrn	63900	64070	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	63900	64070	58	-	.	.
scaffold406	subtractBed	intrn	64012	64128	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	64012	64128	42	-	.	.
scaffold406	subtractBed	intrn	63254	63901	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	63254	63901	207	-	.	.
scaffold406	subtractBed	intrn	63946	64110	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	63946	64110	49	-	.	.
scaffold406	subtractBed	intrn	63897	64007	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	63897	64007	76	-	.	.
scaffold406	subtractBed	intrn	64021	64149	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	64021	64149	29	-	.	.
scaffold406	subtractBed	intrn	63912	64025	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	63912	64025	61	-	.	.
scaffold406	subtractBed	intrn	69609	69980	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	69609	69980	155	-	.	.
scaffold406	subtractBed	intrn	70153	70905	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LINE_L1-Tx1	70153	70905	486	+	.	.
scaffold406	subtractBed	intrn	69609	70073	.	-	.	Parent=CGI_10023839;
	scaffold406	WUBlastX	LTR_Gypsy	69609	70073	47	-	.	.
scaffold406	subtractBed	intrn	77367	77470	.	-	.	Parent=CGI_10023839;
	scaffold406	TRF	Tandem_Repeat	77367	77470	154	+	.	.
scaffold406	subtractBed	intrn	131866	131961	.	-	.	Parent=CGI_10023840;
	scaffold406	TRF	Tandem_Repeat	131866	131961	111	+	.	.
scaffold406	subtractBed	intrn	133968	134033	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	133968	134033	21	+	.	.
scaffold406	subtractBed	intrn	135876	136718	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	135876	136718	266	+	.	.
scaffold406	subtractBed	intrn	134178	134408	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	134178	134408	104	+	.	.
scaffold406	subtractBed	intrn	136517	137059	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	136517	137059	187	+	.	.
scaffold406	subtractBed	intrn	134423	135502	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	134423	135502	508	+	.	.
scaffold406	subtractBed	intrn	133980	134405	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	133980	134405	85	+	.	.
scaffold406	subtractBed	intrn	132527	132640	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	132527	132640	44	+	.	.
scaffold406	subtractBed	intrn	135492	136523	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	135492	136523	586	+	.	.
scaffold406	subtractBed	intrn	134378	134572	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	134378	134572	120	+	.	.
scaffold406	subtractBed	intrn	132613	133956	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy-Cigr	132613	133956	104	+	.	.
scaffold406	subtractBed	intrn	136523	137239	.	-	.	Parent=CGI_10023840;
	scaffold406	WUBlastX	LTR_Gypsy	136523	137239	74	+	.	.
scaffold406	subtractBed	intrn	144143	144216	.	-	.	Parent=CGI_10023840;
	scaffold406	TRF	Tandem_Repeat	144143	144216	148	+	.	.
scaffold406	subtractBed	intrn	148031	148065	.	-	.	Parent=CGI_10023840;
	scaffold406	TRF	Tandem_Repeat	148031	148065	70	+	.	.
scaffold406	subtractBed	intrn	148063	148093	.	-	.	Parent=CGI_10023840;
	scaffold406	TRF	Tandem_Repeat	148063	148093	62	+	.	.
scaffold406	subtractBed	intrn	376002	376181	.	+	.	Parent=CGI_10023846;
	scaffold406	WUBlastX	DNA_Kolobok	376002	376181	28	+	.	.
scaffold406	subtractBed	intrn	403628	404235	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	403628	404235	1180	+	.	.
scaffold406	subtractBed	intrn	406041	406088	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	406041	406088	51	+	.	.
scaffold406	subtractBed	intrn	406473	406532	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	406473	406532	66	+	.	.
scaffold406	subtractBed	intrn	406480	406538	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	406480	406538	64	+	.	.
scaffold406	subtractBed	intrn	409698	409736	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	409698	409736	78	+	.	.
scaffold406	subtractBed	intrn	415111	415332	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	415111	415332	342	+	.	.
scaffold406	subtractBed	intrn	413964	415016	.	+	.	Parent=CGI_10023847;
	scaffold406	WUBlastX	DNA_MuDR	413964	415016	190	-	.	.
scaffold406	subtractBed	intrn	413829	414755	.	+	.	Parent=CGI_10023847;
	scaffold406	WUBlastX	DNA_MuDR	413829	414755	307	-	.	.
scaffold406	subtractBed	intrn	418511	419830	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	418511	419830	1814	+	.	.
scaffold406	subtractBed	intrn	422728	422763	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	422728	422763	72	+	.	.
scaffold406	subtractBed	intrn	424555	424590	.	+	.	Parent=CGI_10023847;
	scaffold406	TRF	Tandem_Repeat	424555	424590	72	+	.	.
scaffold406	subtractBed	intrn	421815	422372	.	+	.	Parent=CGI_10023847;
	scaffold406	WUBlastX	LINE_RTE-X	421815	422372	104	+	.	.
scaffold406	subtractBed	intrn	519535	519585	.	+	.	Parent=CGI_10023854;
	scaffold406	TRF	Tandem_Repeat	519535	519585	102	+	.	.
scaffold406	subtractBed	intrn	669220	669267	.	+	.	Parent=CGI_10023866;
	scaffold406	TRF	Tandem_Repeat	669220	669267	96	+	.	.
scaffold406	subtractBed	intrn	690542	690601	.	-	.	Parent=CGI_10023867;
	scaffold406	TRF	Tandem_Repeat	690542	690601	93	+	.	.
scaffold406	subtractBed	intrn	690628	691752	.	-	.	Parent=CGI_10023867;
	scaffold406	TRF	Tandem_Repeat	690628	691752	1575	+	.	.
scaffold406	subtractBed	intrn	750795	754559	.	+	.	Parent=CGI_10023870;
	scaffold406	WUBlastX	LINE_L1-Tx1	750795	754559	1932	+	.	.
scaffold406	subtractBed	intrn	793758	793971	.	-	.	Parent=CGI_10023873;
	scaffold406	TRF	Tandem_Repeat	793742	793971	361	+	.	.
scaffold406	subtractBed	intrn	794586	794834	.	-	.	Parent=CGI_10023873;
	scaffold406	TRF	Tandem_Repeat	794586	794834	363	+	.	.
scaffold406	subtractBed	intrn	793758	793971	.	+	.	Parent=CGI_10023874;
	scaffold406	TRF	Tandem_Repeat	793742	793971	361	+	.	.
scaffold406	subtractBed	intrn	794586	794834	.	+	.	Parent=CGI_10023874;
	scaffold406	TRF	Tandem_Repeat	794586	794834	363	+	.	.
scaffold406	subtractBed	intrn	827033	827363	.	-	.	Parent=CGI_10023876;
	scaffold406	TRF	Tandem_Repeat	827033	827375	418	+	.	.
scaffold406	subtractBed	intrn	828957	829741	.	-	.	Parent=CGI_10023876;
	scaffold406	TRF	Tandem_Repeat	828957	829741	907	+	.	.
scaffold406	subtractBed	intrn	830567	830656	.	-	.	Parent=CGI_10023876;
	scaffold406	TRF	Tandem_Repeat	830567	830683	168	+	.	.
scaffold406	subtractBed	intrn	861624	862712	.	-	.	Parent=CGI_10023878;
	scaffold406	TRF	Tandem_Repeat	861624	862712	952	+	.	.
scaffold406	subtractBed	intrn	861824	862712	.	-	.	Parent=CGI_10023878;
	scaffold406	TRF	Tandem_Repeat	861824	862712	1132	+	.	.
scaffold40606	subtractBed	intrn	8875	8915	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	8875	8915	57	+	.	.
scaffold40606	subtractBed	intrn	9324	9680	.	+	.	Parent=CGI_10004278;
	scaffold40606	WUBlastX	LINE_RTE-X	9324	9680	55	-	.	.
scaffold40606	subtractBed	intrn	9324	9521	.	+	.	Parent=CGI_10004278;
	scaffold40606	WUBlastX	LINE_RTE-X	9324	9521	79	-	.	.
scaffold40606	subtractBed	intrn	9082	9324	.	+	.	Parent=CGI_10004278;
	scaffold40606	WUBlastX	LINE_RTE-X	9082	9324	114	-	.	.
scaffold40606	subtractBed	intrn	24125	24365	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	24125	24365	410	+	.	.
scaffold40606	subtractBed	intrn	25175	25668	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	25175	25668	394	+	.	.
scaffold40606	subtractBed	intrn	25175	25668	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	25175	25668	435	+	.	.
scaffold40606	subtractBed	intrn	30806	30845	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	30806	30845	80	+	.	.
scaffold40606	subtractBed	intrn	33183	33398	.	+	.	Parent=CGI_10004278;
	scaffold40606	TRF	Tandem_Repeat	33183	33398	344	+	.	.
scaffold40606	subtractBed	intrn	47041	50437	.	-	.	Parent=CGI_10004280;
	scaffold40606	TRF	Tandem_Repeat	47041	50437	3328	+	.	.
scaffold40606	subtractBed	intrn	47169	50437	.	-	.	Parent=CGI_10004280;
	scaffold40606	TRF	Tandem_Repeat	47169	50437	3380	+	.	.
scaffold40606	subtractBed	intrn	74316	74351	.	-	.	Parent=CGI_10004282;
	scaffold40606	TRF	Tandem_Repeat	74316	74351	63	+	.	.
scaffold40614	subtractBed	intrn	22699	22749	.	+	.	Parent=CGI_10004255;
	scaffold40614	TRF	Tandem_Repeat	22699	22749	102	+	.	.
scaffold40614	subtractBed	intrn	25459	26104	.	+	.	Parent=CGI_10004255;
	scaffold40614	TRF	Tandem_Repeat	25459	26104	679	+	.	.
scaffold40614	subtractBed	intrn	47264	47307	.	-	.	Parent=CGI_10004257;
	scaffold40614	TRF	Tandem_Repeat	47264	47307	88	+	.	.
scaffold40614	subtractBed	intrn	59634	59681	.	+	.	Parent=CGI_10004259;
	scaffold40614	TRF	Tandem_Repeat	59634	59681	60	+	.	.
scaffold40614	subtractBed	intrn	59635	59703	.	+	.	Parent=CGI_10004259;
	scaffold40614	TRF	Tandem_Repeat	59635	59703	75	+	.	.
scaffold40614	subtractBed	intrn	59635	59703	.	+	.	Parent=CGI_10004259;
	scaffold40614	TRF	Tandem_Repeat	59635	59703	66	+	.	.
scaffold40614	subtractBed	intrn	64948	65008	.	+	.	Parent=CGI_10004259;
	scaffold40614	TRF	Tandem_Repeat	64948	65008	122	+	.	.
scaffold40614	subtractBed	intrn	64043	64543	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LTR_DIRS	64043	64543	283	-	.	.
scaffold40614	subtractBed	intrn	64546	64653	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LTR_DIRS	64546	64653	52	-	.	.
scaffold40614	subtractBed	intrn	62290	62694	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LINE_L2	62290	62694	141	-	.	.
scaffold40614	subtractBed	intrn	64546	64692	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LTR_DIRS	64546	64692	37	-	.	.
scaffold40614	subtractBed	intrn	60948	61787	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LINE_L2	60948	61787	370	-	.	.
scaffold40614	subtractBed	intrn	61802	62284	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LINE_L2	61802	62284	265	-	.	.
scaffold40614	subtractBed	intrn	62290	62598	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LINE_L2	62290	62598	256	-	.	.
scaffold40614	subtractBed	intrn	62673	63365	.	+	.	Parent=CGI_10004259;
	scaffold40614	WUBlastX	LINE_L2	62673	63365	265	-	.	.
scaffold40638	subtractBed	intrn	5627	5731	.	+	.	Parent=CGI_10004284;
	scaffold40638	WUBlastX	DNA_Zator	5627	5731	28	+	.	.
scaffold40638	subtractBed	intrn	5868	6071	.	+	.	Parent=CGI_10004284;
	scaffold40638	WUBlastX	DNA_Zator	5868	6071	77	+	.	.
scaffold40638	subtractBed	intrn	14435	14491	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	14435	14491	114	+	.	.
scaffold40638	subtractBed	intrn	15805	15858	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	15805	15858	72	+	.	.
scaffold40638	subtractBed	intrn	15796	15858	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	15796	15858	99	+	.	.
scaffold40638	subtractBed	intrn	15801	15858	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	15801	15858	80	+	.	.
scaffold40638	subtractBed	intrn	16028	17387	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	16028	17387	2030	+	.	.
scaffold40638	subtractBed	intrn	16028	17387	.	+	.	Parent=CGI_10004284;
	scaffold40638	TRF	Tandem_Repeat	16028	17387	2065	+	.	.
scaffold40638	subtractBed	intrn	25506	25532	.	+	.	Parent=CGI_10004285;
	scaffold40638	TRF	Tandem_Repeat	25506	25532	54	+	.	.
scaffold40638	subtractBed	intrn	43445	43801	.	-	.	Parent=CGI_10004286;
	scaffold40638	WUBlastX	LINE_L2	43445	43801	115	+	.	.
scaffold40638	subtractBed	intrn	43811	44065	.	-	.	Parent=CGI_10004286;
	scaffold40638	WUBlastX	LINE_L2	43811	44065	50	+	.	.
scaffold40638	subtractBed	intrn	43445	43957	.	-	.	Parent=CGI_10004286;
	scaffold40638	WUBlastX	LINE_L2	43445	43957	71	+	.	.
scaffold40638	subtractBed	intrn	47314	47381	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47314	47381	61	+	.	.
scaffold40638	subtractBed	intrn	47314	47375	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47314	47375	53	+	.	.
scaffold40638	subtractBed	intrn	47330	47394	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47330	47394	76	+	.	.
scaffold40638	subtractBed	intrn	47313	47381	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47313	47381	70	+	.	.
scaffold40638	subtractBed	intrn	47313	47394	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47313	47394	60	+	.	.
scaffold40638	subtractBed	intrn	47340	47380	.	-	.	Parent=CGI_10004286;
	scaffold40638	TRF	Tandem_Repeat	47340	47380	52	+	.	.
scaffold40638	subtractBed	intrn	55324	56133	.	-	.	Parent=CGI_10004286;
	scaffold40638	WUBlastX	DNA_En-Spm	55324	56133	166	-	.	.
scaffold40638	subtractBed	intrn	55570	56475	.	-	.	Parent=CGI_10004286;
	scaffold40638	WUBlastX	DNA_En-Spm	55570	56475	255	-	.	.
scaffold40638	subtractBed	intrn	62301	63635	.	-	.	Parent=CGI_10004287;
	scaffold40638	WUBlastX	LTR_Gypsy	62301	63635	296	-	.	.
scaffold40638	subtractBed	intrn	66567	66941	.	-	.	Parent=CGI_10004287;
	scaffold40638	WUBlastX	LTR_Gypsy-Cigr	66567	66941	148	-	.	.
scaffold40638	subtractBed	intrn	65802	66251	.	-	.	Parent=CGI_10004287;
	scaffold40638	WUBlastX	LTR_Gypsy	65802	66251	33	-	.	.
scaffold40638	subtractBed	intrn	66215	66394	.	-	.	Parent=CGI_10004287;
	scaffold40638	WUBlastX	LTR_ERVK	66215	66394	31	-	.	.
scaffold40638	subtractBed	intrn	62523	66182	.	-	.	Parent=CGI_10004287;
	scaffold40638	WUBlastX	LTR_Gypsy-Cigr	62523	66182	1378	-	.	.
scaffold40644	subtractBed	intrn	61318	61359	.	-	.	Parent=CGI_10004304;
	scaffold40644	TRF	Tandem_Repeat	61318	61359	57	+	.	.
scaffold40644	subtractBed	intrn	76880	76915	.	-	.	Parent=CGI_10004306;
	scaffold40644	TRF	Tandem_Repeat	76880	76915	63	+	.	.
scaffold40644	subtractBed	intrn	77544	77575	.	-	.	Parent=CGI_10004306;
	scaffold40644	TRF	Tandem_Repeat	77544	77575	55	+	.	.
scaffold40644	subtractBed	intrn	77667	77723	.	-	.	Parent=CGI_10004306;
	scaffold40644	WUBlastX	LINE_Penelope	77667	77867	41	+	.	.
scaffold40680	subtractBed	intrn	11135	11290	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_TcMar-Tc1	11135	11290	69	+	.	.
scaffold40680	subtractBed	intrn	10887	10997	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_TcMar-Tc1	10887	10997	30	+	.	.
scaffold40680	subtractBed	intrn	10821	10985	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_TcMar-Tc1	10821	10985	25	+	.	.
scaffold40680	subtractBed	intrn	11478	11777	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_TcMar-Tc1	11478	11777	155	+	.	.
scaffold40680	subtractBed	intrn	19564	20660	.	-	.	Parent=CGI_10004353;
	scaffold40680	TRF	Tandem_Repeat	19564	20660	1486	+	.	.
scaffold40680	subtractBed	intrn	19565	20660	.	-	.	Parent=CGI_10004353;
	scaffold40680	TRF	Tandem_Repeat	19565	20660	1721	+	.	.
scaffold40680	subtractBed	intrn	19565	20660	.	-	.	Parent=CGI_10004353;
	scaffold40680	TRF	Tandem_Repeat	19565	20660	1687	+	.	.
scaffold40680	subtractBed	intrn	22160	22980	.	-	.	Parent=CGI_10004353;
	scaffold40680	TRF	Tandem_Repeat	22160	22980	1080	+	.	.
scaffold40680	subtractBed	intrn	25006	25263	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	25006	25263	46	+	.	.
scaffold40680	subtractBed	intrn	25006	25194	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	25006	25194	53	+	.	.
scaffold40680	subtractBed	intrn	27042	27134	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	27042	27329	132	+	.	.
scaffold40680	subtractBed	intrn	27418	27699	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	27418	27699	219	+	.	.
scaffold40680	subtractBed	intrn	27847	27899	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	27847	28113	40	+	.	.
scaffold40680	subtractBed	intrn	27347	27693	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_Harbinger	27337	27693	144	+	.	.
scaffold40680	subtractBed	intrn	29826	30113	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_En-Spm	29826	30113	107	-	.	.
scaffold40680	subtractBed	intrn	29847	30188	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	DNA_En-Spm	29847	30188	100	-	.	.
scaffold40680	subtractBed	intrn	35810	36505	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	LTR_Copia	35810	36535	92	+	.	.
scaffold40680	subtractBed	intrn	34490	36340	.	-	.	Parent=CGI_10004353;
	scaffold40680	WUBlastX	LTR_Gypsy	34490	36340	1880	+	.	.
scaffold40680	subtractBed	intrn	27418	27699	.	+	.	Parent=CGI_10004354;
	scaffold40680	WUBlastX	DNA_Harbinger	27418	27699	219	+	.	.
scaffold40680	subtractBed	intrn	27847	27899	.	+	.	Parent=CGI_10004354;
	scaffold40680	WUBlastX	DNA_Harbinger	27847	28113	40	+	.	.
scaffold40680	subtractBed	intrn	27347	27693	.	+	.	Parent=CGI_10004354;
	scaffold40680	WUBlastX	DNA_Harbinger	27337	27693	144	+	.	.
scaffold407	subtractBed	intrn	15665	15722	.	+	.	Parent=CGI_10002626;
	scaffold407	TRF	Tandem_Repeat	15665	15722	62	+	.	.
scaffold407	subtractBed	intrn	14108	14137	.	+	.	Parent=CGI_10002626;
	scaffold407	WUBlastX	LINE_RTE	14000	14137	35	+	.	.
scaffold407	subtractBed	intrn	15435	15632	.	+	.	Parent=CGI_10002626;
	scaffold407	WUBlastX	LINE_CR1-L2	15435	15632	29	+	.	.
scaffold407	subtractBed	intrn	14561	14896	.	+	.	Parent=CGI_10002626;
	scaffold407	WUBlastX	LINE_L2	14561	14896	197	+	.	.
scaffold407	subtractBed	intrn	14896	15492	.	+	.	Parent=CGI_10002626;
	scaffold407	WUBlastX	LINE_L2	14896	15492	214	+	.	.
scaffold407	subtractBed	intrn	14495	14896	.	+	.	Parent=CGI_10002626;
	scaffold407	WUBlastX	LINE_L2	14495	14896	80	+	.	.
scaffold40740	subtractBed	intrn	10555	10597	.	-	.	Parent=CGI_10004394;
	scaffold40740	TRF	Tandem_Repeat	10555	10597	86	+	.	.
scaffold40740	subtractBed	intrn	13532	13652	.	-	.	Parent=CGI_10004394;
	scaffold40740	TRF	Tandem_Repeat	13532	13652	86	+	.	.
scaffold40740	subtractBed	intrn	13773	13922	.	-	.	Parent=CGI_10004394;
	scaffold40740	TRF	Tandem_Repeat	13773	13922	63	+	.	.
scaffold40740	subtractBed	intrn	37164	37191	.	-	.	Parent=CGI_10004395;
	scaffold40740	TRF	Tandem_Repeat	37164	37191	56	+	.	.
scaffold40740	subtractBed	intrn	38506	38543	.	-	.	Parent=CGI_10004395;
	scaffold40740	TRF	Tandem_Repeat	38506	38543	51	+	.	.
scaffold40740	subtractBed	intrn	71838	72092	.	-	.	Parent=CGI_10004398;
	scaffold40740	WUBlastX	LINE_RTE-X	71838	72092	36	-	.	.
scaffold40744	subtractBed	intrn	22752	22844	.	+	.	Parent=CGI_10004375;
	scaffold40744	TRF	Tandem_Repeat	22752	22844	66	+	.	.
scaffold40744	subtractBed	intrn	22727	23385	.	+	.	Parent=CGI_10004375;
	scaffold40744	TRF	Tandem_Repeat	22727	23385	783	+	.	.
scaffold40744	subtractBed	intrn	22794	23359	.	+	.	Parent=CGI_10004375;
	scaffold40744	TRF	Tandem_Repeat	22794	23359	97	+	.	.
scaffold40744	subtractBed	intrn	91092	91934	.	+	.	Parent=CGI_10004380;
	scaffold40744	WUBlastX	LINE_L1-Tx1	91092	91934	82	+	.	.
scaffold40786	subtractBed	intrn	26001	26086	.	+	.	Parent=CGI_10004440;
	scaffold40786	TRF	Tandem_Repeat	26001	26086	172	+	.	.
scaffold40786	subtractBed	intrn	28861	28982	.	+	.	Parent=CGI_10004440;
	scaffold40786	TRF	Tandem_Repeat	28861	28982	149	+	.	.
scaffold40786	subtractBed	intrn	38557	38609	.	+	.	Parent=CGI_10004440;
	scaffold40786	TRF	Tandem_Repeat	38557	38609	106	+	.	.
scaffold40786	subtractBed	intrn	41572	41676	.	+	.	Parent=CGI_10004440;
	scaffold40786	WUBlastX	LINE_L2	41572	41676	23	+	.	.
scaffold40786	subtractBed	intrn	41639	41677	.	+	.	Parent=CGI_10004440;
	scaffold40786	WUBlastX	LINE_L2	41639	42037	113	+	.	.
scaffold40794	subtractBed	intrn	24806	25345	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_IS4EU	24806	25345	242	+	.	.
scaffold40794	subtractBed	intrn	24785	25438	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_Kolobok-IS4	24785	25438	212	+	.	.
scaffold40794	subtractBed	intrn	24031	24411	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_Kolobok-IS4	24031	24411	109	-	.	.
scaffold40794	subtractBed	intrn	23579	24037	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_IS4EU	23579	24037	212	-	.	.
scaffold40794	subtractBed	intrn	24031	24507	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_IS4EU	24031	24507	85	-	.	.
scaffold40794	subtractBed	intrn	21488	21754	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_IS4EU	21488	21754	53	+	.	.
scaffold40794	subtractBed	intrn	22122	22322	.	-	.	Parent=CGI_10004495;
	scaffold40794	WUBlastX	DNA_IS4EU	22122	22322	40	+	.	.
scaffold408	subtractBed	intrn	4566	4620	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	4566	4620	53	+	.	.
scaffold408	subtractBed	intrn	4725	4759	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	4725	4759	70	+	.	.
scaffold408	subtractBed	intrn	5453	5817	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	5453	5817	388	+	.	.
scaffold408	subtractBed	intrn	5455	5817	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	5455	5817	440	+	.	.
scaffold408	subtractBed	intrn	6640	6774	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	6640	6774	162	+	.	.
scaffold408	subtractBed	intrn	9757	9785	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	9757	9785	58	+	.	.
scaffold408	subtractBed	intrn	11876	11966	.	-	.	Parent=CGI_10023209;
	scaffold408	TRF	Tandem_Repeat	11876	11966	175	+	.	.
scaffold408	subtractBed	intrn	22500	22545	.	+	.	Parent=CGI_10023211;
	scaffold408	TRF	Tandem_Repeat	22500	22545	92	+	.	.
scaffold408	subtractBed	intrn	144161	144382	.	+	.	Parent=CGI_10023222;
	scaffold408	TRF	Tandem_Repeat	144161	144382	285	+	.	.
scaffold408	subtractBed	intrn	146301	146375	.	+	.	Parent=CGI_10023222;
	scaffold408	TRF	Tandem_Repeat	146301	146375	150	+	.	.
scaffold408	subtractBed	intrn	146301	146375	.	-	.	Parent=CGI_10023223;
	scaffold408	TRF	Tandem_Repeat	146301	146375	150	+	.	.
scaffold408	subtractBed	intrn	153535	153585	.	-	.	Parent=CGI_10023224;
	scaffold408	TRF	Tandem_Repeat	153535	153585	102	+	.	.
scaffold408	subtractBed	intrn	158130	158165	.	+	.	Parent=CGI_10023225;
	scaffold408	TRF	Tandem_Repeat	158130	158165	72	+	.	.
scaffold408	subtractBed	intrn	175720	175763	.	-	.	Parent=CGI_10023226;
	scaffold408	TRF	Tandem_Repeat	175720	175763	88	+	.	.
scaffold408	subtractBed	intrn	180929	180969	.	+	.	Parent=CGI_10023227;
	scaffold408	TRF	Tandem_Repeat	180929	180969	66	+	.	.
scaffold408	subtractBed	intrn	181565	181632	.	+	.	Parent=CGI_10023227;
	scaffold408	TRF	Tandem_Repeat	181565	181632	127	+	.	.
scaffold408	subtractBed	intrn	181670	181725	.	+	.	Parent=CGI_10023227;
	scaffold408	TRF	Tandem_Repeat	181670	181725	55	+	.	.
scaffold408	subtractBed	intrn	209929	211422	.	-	.	Parent=CGI_10023230;
	scaffold408	TRF	Tandem_Repeat	209929	211422	1694	+	.	.
scaffold408	subtractBed	intrn	209929	211422	.	-	.	Parent=CGI_10023230;
	scaffold408	TRF	Tandem_Repeat	209929	211422	1711	+	.	.
scaffold408	subtractBed	intrn	398167	398198	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	398167	398198	64	+	.	.
scaffold408	subtractBed	intrn	398880	400165	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	398880	400191	2121	+	.	.
scaffold408	subtractBed	intrn	401889	402375	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	401889	402375	731	+	.	.
scaffold408	subtractBed	intrn	404736	404880	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	404736	404880	98	+	.	.
scaffold408	subtractBed	intrn	408197	409131	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	408197	409131	1420	+	.	.
scaffold408	subtractBed	intrn	412184	412215	.	-	.	Parent=CGI_10023236;
	scaffold408	TRF	Tandem_Repeat	412184	412215	55	+	.	.
scaffold408	subtractBed	intrn	408197	409131	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	408197	409131	1420	+	.	.
scaffold408	subtractBed	intrn	412184	412215	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	412184	412215	55	+	.	.
scaffold408	subtractBed	intrn	417752	418126	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	417752	418126	185	+	.	.
scaffold408	subtractBed	intrn	417751	418150	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	417751	418150	260	+	.	.
scaffold408	subtractBed	intrn	417752	418168	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	417752	418168	336	+	.	.
scaffold408	subtractBed	intrn	418981	419118	.	+	.	Parent=CGI_10023237;
	scaffold408	TRF	Tandem_Repeat	418981	419118	109	+	.	.
scaffold408	subtractBed	intrn	424025	424066	.	-	.	Parent=CGI_10023238;
	scaffold408	TRF	Tandem_Repeat	424025	424066	84	+	.	.
scaffold408	subtractBed	intrn	427627	428235	.	-	.	Parent=CGI_10023238;
	scaffold408	WUBlastX	LINE_RTE-X	427627	428235	222	-	.	.
scaffold408	subtractBed	intrn	428244	428354	.	-	.	Parent=CGI_10023238;
	scaffold408	WUBlastX	LINE_RTE-X	428244	428354	74	-	.	.
scaffold408	subtractBed	intrn	529390	529945	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529390	529945	312	+	.	.
scaffold408	subtractBed	intrn	529402	529459	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529402	529459	60	+	.	.
scaffold408	subtractBed	intrn	529390	529643	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529390	529643	271	+	.	.
scaffold408	subtractBed	intrn	529405	529665	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529405	529665	170	+	.	.
scaffold408	subtractBed	intrn	529526	529664	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529526	529664	124	+	.	.
scaffold408	subtractBed	intrn	529702	529919	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	529702	529919	169	+	.	.
scaffold408	subtractBed	intrn	543372	543646	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	543372	543646	363	+	.	.
scaffold408	subtractBed	intrn	543565	543883	.	-	.	Parent=CGI_10023247;
	scaffold408	TRF	Tandem_Repeat	543565	543883	278	+	.	.
scaffold408	subtractBed	intrn	554120	554144	.	-	.	Parent=CGI_10023249;
	scaffold408	TRF	Tandem_Repeat	554120	554144	50	+	.	.
scaffold408	subtractBed	intrn	564387	564455	.	-	.	Parent=CGI_10023249;
	scaffold408	WUBlastX	LTR_DIRS	564387	564455	20	-	.	.
scaffold408	subtractBed	intrn	564461	564772	.	-	.	Parent=CGI_10023249;
	scaffold408	WUBlastX	LTR_DIRS	564461	564772	45	-	.	.
scaffold408	subtractBed	intrn	564491	564697	.	-	.	Parent=CGI_10023249;
	scaffold408	WUBlastX	LTR_DIRS	564491	564697	84	-	.	.
scaffold408	subtractBed	intrn	571347	571376	.	+	.	Parent=CGI_10023250;
	scaffold408	TRF	Tandem_Repeat	571347	571376	60	+	.	.
scaffold408	subtractBed	intrn	572181	572236	.	+	.	Parent=CGI_10023250;
	scaffold408	TRF	Tandem_Repeat	572181	572236	112	+	.	.
scaffold408	subtractBed	intrn	580922	580954	.	+	.	Parent=CGI_10023250;
	scaffold408	TRF	Tandem_Repeat	580922	580954	66	+	.	.
scaffold408	subtractBed	intrn	583117	583143	.	+	.	Parent=CGI_10023250;
	scaffold408	TRF	Tandem_Repeat	583117	583143	54	+	.	.
scaffold408	subtractBed	intrn	611603	611644	.	-	.	Parent=CGI_10023253;
	scaffold408	TRF	Tandem_Repeat	611603	611644	50	+	.	.
scaffold408	subtractBed	intrn	617814	617866	.	+	.	Parent=CGI_10023254;
	scaffold408	TRF	Tandem_Repeat	617814	617866	106	+	.	.
scaffold408	subtractBed	intrn	617866	617909	.	+	.	Parent=CGI_10023254;
	scaffold408	TRF	Tandem_Repeat	617866	617909	81	+	.	.
scaffold408	subtractBed	intrn	619230	619274	.	+	.	Parent=CGI_10023254;
	scaffold408	TRF	Tandem_Repeat	619230	619274	90	+	.	.
scaffold408	subtractBed	intrn	619274	619316	.	+	.	Parent=CGI_10023254;
	scaffold408	TRF	Tandem_Repeat	619274	619316	86	+	.	.
scaffold408	subtractBed	intrn	623660	623717	.	+	.	Parent=CGI_10023254;
	scaffold408	TRF	Tandem_Repeat	623660	623717	116	+	.	.
scaffold408	subtractBed	intrn	629293	630037	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	629293	630037	1099	+	.	.
scaffold408	subtractBed	intrn	629365	629470	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	629365	629470	70	+	.	.
scaffold408	subtractBed	intrn	629520	629666	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	629520	629666	60	+	.	.
scaffold408	subtractBed	intrn	632313	632339	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	632313	632339	54	+	.	.
scaffold408	subtractBed	intrn	635838	636035	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	635838	636035	143	+	.	.
scaffold408	subtractBed	intrn	636035	636170	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	636035	636170	103	+	.	.
scaffold408	subtractBed	intrn	636172	636376	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	636172	636376	180	+	.	.
scaffold408	subtractBed	intrn	637725	637767	.	-	.	Parent=CGI_10023255;
	scaffold408	TRF	Tandem_Repeat	637725	637767	86	+	.	.
scaffold408	subtractBed	intrn	651736	652071	.	-	.	Parent=CGI_10023256;
	scaffold408	TRF	Tandem_Repeat	651736	652071	158	+	.	.
scaffold408	subtractBed	intrn	655107	655477	.	-	.	Parent=CGI_10023256;
	scaffold408	TRF	Tandem_Repeat	655107	655477	107	+	.	.
scaffold408	subtractBed	intrn	655112	655453	.	-	.	Parent=CGI_10023256;
	scaffold408	TRF	Tandem_Repeat	655112	655453	117	+	.	.
scaffold408	subtractBed	intrn	655125	655477	.	-	.	Parent=CGI_10023256;
	scaffold408	TRF	Tandem_Repeat	655125	655477	207	+	.	.
scaffold408	subtractBed	intrn	655111	655483	.	-	.	Parent=CGI_10023256;
	scaffold408	TRF	Tandem_Repeat	655111	655483	258	+	.	.
scaffold408	subtractBed	intrn	804751	804781	.	-	.	Parent=CGI_10023265;
	scaffold408	TRF	Tandem_Repeat	804751	804781	53	+	.	.
scaffold40808	subtractBed	intrn	4540	4580	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	4540	4580	82	+	.	.
scaffold40808	subtractBed	intrn	5676	5731	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	5676	5731	112	+	.	.
scaffold40808	subtractBed	intrn	14274	14340	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	14274	14340	62	+	.	.
scaffold40808	subtractBed	intrn	14274	14340	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	14274	14340	73	+	.	.
scaffold40808	subtractBed	intrn	16409	16472	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	16409	16472	128	+	.	.
scaffold40808	subtractBed	intrn	16650	16688	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	16650	16688	78	+	.	.
scaffold40808	subtractBed	intrn	17198	17264	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	17198	17264	53	+	.	.
scaffold40808	subtractBed	intrn	30276	30321	.	+	.	Parent=CGI_10004446;
	scaffold40808	TRF	Tandem_Repeat	30276	30321	92	+	.	.
scaffold40808	subtractBed	intrn	89152	89252	.	-	.	Parent=CGI_10004448;
	scaffold40808	TRF	Tandem_Repeat	89152	89252	148	+	.	.
scaffold40820	subtractBed	intrn	25903	26072	.	+	.	Parent=CGI_10004473;
	scaffold40820	TRF	Tandem_Repeat	25903	26072	119	+	.	.
scaffold40820	subtractBed	intrn	26072	26247	.	+	.	Parent=CGI_10004473;
	scaffold40820	TRF	Tandem_Repeat	26072	26247	208	+	.	.
scaffold40820	subtractBed	intrn	26088	26249	.	+	.	Parent=CGI_10004473;
	scaffold40820	TRF	Tandem_Repeat	26088	26249	144	+	.	.
scaffold40820	subtractBed	intrn	26555	26599	.	+	.	Parent=CGI_10004473;
	scaffold40820	TRF	Tandem_Repeat	26555	26599	90	+	.	.
scaffold40820	subtractBed	intrn	29966	30708	.	+	.	Parent=CGI_10004473;
	scaffold40820	TRF	Tandem_Repeat	29966	30708	981	+	.	.
scaffold40820	subtractBed	intrn	45089	45213	.	-	.	Parent=CGI_10004475;
	scaffold40820	TRF	Tandem_Repeat	45089	45213	92	+	.	.
scaffold40820	subtractBed	intrn	61783	62038	.	+	.	Parent=CGI_10004477;
	scaffold40820	TRF	Tandem_Repeat	61783	62038	240	+	.	.
scaffold40820	subtractBed	intrn	61839	62080	.	+	.	Parent=CGI_10004477;
	scaffold40820	TRF	Tandem_Repeat	61839	62080	139	+	.	.
scaffold40820	subtractBed	intrn	83592	83636	.	+	.	Parent=CGI_10004478;
	scaffold40820	TRF	Tandem_Repeat	83592	83636	90	+	.	.
scaffold40820	subtractBed	intrn	96536	96816	.	+	.	Parent=CGI_10004479;
	scaffold40820	TRF	Tandem_Repeat	96536	96816	273	+	.	.
scaffold40828	subtractBed	intrn	42545	42575	.	+	.	Parent=CGI_10004502;
	scaffold40828	TRF	Tandem_Repeat	42545	42575	53	+	.	.
scaffold40828	subtractBed	intrn	43118	43166	.	+	.	Parent=CGI_10004502;
	scaffold40828	TRF	Tandem_Repeat	43118	43166	98	+	.	.
scaffold40828	subtractBed	intrn	43197	43235	.	+	.	Parent=CGI_10004502;
	scaffold40828	TRF	Tandem_Repeat	43197	43235	55	+	.	.
scaffold40828	subtractBed	intrn	57388	57657	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57388	57657	39	-	.	.
scaffold40828	subtractBed	intrn	56938	57057	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	56938	57057	66	-	.	.
scaffold40828	subtractBed	intrn	57493	57660	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57493	57660	91	-	.	.
scaffold40828	subtractBed	intrn	56881	57060	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	56881	57060	55	-	.	.
scaffold40828	subtractBed	intrn	56836	57096	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	56836	57096	48	-	.	.
scaffold40828	subtractBed	intrn	56941	57114	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	56941	57114	61	-	.	.
scaffold40828	subtractBed	intrn	57153	57287	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57153	57287	23	-	.	.
scaffold40828	subtractBed	intrn	57457	57801	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57457	57801	53	-	.	.
scaffold40828	subtractBed	intrn	57493	57741	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57493	57741	87	-	.	.
scaffold40828	subtractBed	intrn	57920	58102	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57920	58102	25	-	.	.
scaffold40828	subtractBed	intrn	57463	57657	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57463	57657	64	-	.	.
scaffold40828	subtractBed	intrn	57788	57934	.	+	.	Parent=CGI_10004502;
	scaffold40828	WUBlastX	LTR_Gypsy	57788	57934	20	-	.	.
scaffold40832	subtractBed	intrn	6295	6373	.	+	.	Parent=CGI_10004451;
	scaffold40832	TRF	Tandem_Repeat	6295	6373	108	+	.	.
scaffold40832	subtractBed	intrn	8065	8126	.	+	.	Parent=CGI_10004451;
	scaffold40832	TRF	Tandem_Repeat	8065	8126	115	+	.	.
scaffold40832	subtractBed	intrn	15427	15478	.	+	.	Parent=CGI_10004452;
	scaffold40832	TRF	Tandem_Repeat	15427	15478	68	+	.	.
scaffold40832	subtractBed	intrn	15427	15478	.	+	.	Parent=CGI_10004452;
	scaffold40832	TRF	Tandem_Repeat	15427	15478	68	+	.	.
scaffold40832	subtractBed	intrn	15427	15478	.	+	.	Parent=CGI_10004452;
	scaffold40832	TRF	Tandem_Repeat	15427	15478	68	+	.	.
scaffold40832	subtractBed	intrn	17523	17555	.	+	.	Parent=CGI_10004452;
	scaffold40832	TRF	Tandem_Repeat	17523	17555	57	+	.	.
scaffold40832	subtractBed	intrn	18172	18205	.	+	.	Parent=CGI_10004452;
	scaffold40832	TRF	Tandem_Repeat	18172	18205	68	+	.	.
scaffold40832	subtractBed	intrn	27255	27296	.	+	.	Parent=CGI_10004453;
	scaffold40832	TRF	Tandem_Repeat	27255	27296	84	+	.	.
scaffold40832	subtractBed	intrn	79819	81663	.	+	.	Parent=CGI_10004457;
	scaffold40832	WUBlastX	LINE_RTE-X	79819	81663	840	-	.	.
scaffold40832	subtractBed	intrn	79602	79667	.	+	.	Parent=CGI_10004457;
	scaffold40832	WUBlastX	LINE_I	79602	79667	23	-	.	.
scaffold40832	subtractBed	intrn	81845	81904	.	+	.	Parent=CGI_10004457;
	scaffold40832	WUBlastX	LINE_RTE-BovB	81845	81904	25	-	.	.
scaffold40832	subtractBed	intrn	82561	82635	.	+	.	Parent=CGI_10004457;
	scaffold40832	WUBlastX	LINE_L1-Tx1	82561	82635	23	-	.	.
scaffold40832	subtractBed	intrn	82546	82632	.	+	.	Parent=CGI_10004457;
	scaffold40832	WUBlastX	LINE_RTE-X	82546	82632	22	-	.	.
scaffold40832	subtractBed	intrn	89172	89224	.	+	.	Parent=CGI_10004459;
	scaffold40832	TRF	Tandem_Repeat	89172	89224	70	+	.	.
scaffold40836	subtractBed	intrn	22400	22448	.	-	.	Parent=CGI_10004482;
	scaffold40836	TRF	Tandem_Repeat	22400	22448	98	+	.	.
scaffold40836	subtractBed	intrn	29992	31240	.	-	.	Parent=CGI_10004482;
	scaffold40836	TRF	Tandem_Repeat	29992	31240	1790	+	.	.
scaffold40836	subtractBed	intrn	32664	32709	.	-	.	Parent=CGI_10004482;
	scaffold40836	TRF	Tandem_Repeat	32664	32709	67	+	.	.
scaffold40836	subtractBed	intrn	63304	63779	.	+	.	Parent=CGI_10004485;
	scaffold40836	TRF	Tandem_Repeat	63304	63779	283	+	.	.
scaffold40836	subtractBed	intrn	81304	81825	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L2	81304	81825	100	-	.	.
scaffold40836	subtractBed	intrn	82549	82692	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_CR1-L2	82549	82692	87	-	.	.
scaffold40836	subtractBed	intrn	82564	82719	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_CR1-L2	82564	82719	68	-	.	.
scaffold40836	subtractBed	intrn	81789	81959	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_CR1-L2	81789	81959	29	-	.	.
scaffold40836	subtractBed	intrn	81905	82570	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L2	81905	82570	154	-	.	.
scaffold40836	subtractBed	intrn	88283	88333	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L1	88283	88333	30	-	.	.
scaffold40836	subtractBed	intrn	87513	87587	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	87513	87587	27	-	.	.
scaffold40836	subtractBed	intrn	87328	87537	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L2	87328	87537	33	-	.	.
scaffold40836	subtractBed	intrn	87214	87477	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_CR1	87214	87477	45	-	.	.
scaffold40836	subtractBed	intrn	86315	86563	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	86315	86563	83	-	.	.
scaffold40836	subtractBed	intrn	83613	83753	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	83613	83753	26	-	.	.
scaffold40836	subtractBed	intrn	86315	86479	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	86315	86479	96	-	.	.
scaffold40836	subtractBed	intrn	86542	87051	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L2	86542	87051	43	-	.	.
scaffold40836	subtractBed	intrn	86282	86470	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_Dong-R4	86282	86470	53	-	.	.
scaffold40836	subtractBed	intrn	84636	85307	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	84636	85307	389	-	.	.
scaffold40836	subtractBed	intrn	84332	84646	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	84332	84646	41	-	.	.
scaffold40836	subtractBed	intrn	87916	88005	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_I	87916	88005	32	-	.	.
scaffold40836	subtractBed	intrn	86542	86949	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	86542	86949	205	-	.	.
scaffold40836	subtractBed	intrn	87760	87981	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	87760	87981	20	-	.	.
scaffold40836	subtractBed	intrn	84079	84525	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	84079	84525	77	-	.	.
scaffold40836	subtractBed	intrn	83992	84363	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	83992	84363	115	-	.	.
scaffold40836	subtractBed	intrn	85309	86283	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	85309	86283	418	-	.	.
scaffold40836	subtractBed	intrn	87304	87486	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_RTE-X	87304	87486	135	-	.	.
scaffold40836	subtractBed	intrn	87262	87483	.	+	.	Parent=CGI_10004486;
	scaffold40836	WUBlastX	LINE_L2	87262	87483	59	-	.	.
scaffold40856	subtractBed	intrn	22352	22468	.	+	.	Parent=CGI_10004523;
	scaffold40856	TRF	Tandem_Repeat	22352	22468	144	+	.	.
scaffold40856	subtractBed	intrn	23094	23377	.	+	.	Parent=CGI_10004523;
	scaffold40856	TRF	Tandem_Repeat	23094	23377	235	+	.	.
scaffold40856	subtractBed	intrn	23094	23378	.	+	.	Parent=CGI_10004523;
	scaffold40856	TRF	Tandem_Repeat	23094	23378	304	+	.	.
scaffold40856	subtractBed	intrn	31943	31997	.	+	.	Parent=CGI_10004523;
	scaffold40856	TRF	Tandem_Repeat	31943	31997	65	+	.	.
scaffold40856	subtractBed	intrn	31939	31994	.	+	.	Parent=CGI_10004523;
	scaffold40856	TRF	Tandem_Repeat	31939	31994	71	+	.	.
scaffold40856	subtractBed	intrn	89947	89998	.	-	.	Parent=CGI_10004527;
	scaffold40856	TRF	Tandem_Repeat	89947	89998	104	+	.	.
scaffold40868	subtractBed	intrn	11995	12052	.	+	.	Parent=CGI_10004529;
	scaffold40868	TRF	Tandem_Repeat	11995	12052	116	+	.	.
scaffold40874	subtractBed	intrn	34135	34168	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	34135	34168	68	+	.	.
scaffold40874	subtractBed	intrn	37988	38027	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	37988	38027	57	+	.	.
scaffold40874	subtractBed	intrn	44103	44165	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	44103	44165	81	+	.	.
scaffold40874	subtractBed	intrn	44112	44165	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	44112	44165	90	+	.	.
scaffold40874	subtractBed	intrn	50802	51697	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	50771	51697	1746	+	.	.
scaffold40874	subtractBed	intrn	55387	55589	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	55387	55589	304	+	.	.
scaffold40874	subtractBed	intrn	56601	57279	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	56601	57279	861	+	.	.
scaffold40874	subtractBed	intrn	63124	63645	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	63124	63645	614	+	.	.
scaffold40874	subtractBed	intrn	63124	63650	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	63124	63650	594	+	.	.
scaffold40874	subtractBed	intrn	66631	68383	.	+	.	Parent=CGI_10004437;
	scaffold40874	TRF	Tandem_Repeat	66631	68383	2986	+	.	.
scaffold40874	subtractBed	intrn	70106	70847	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	70106	70847	1385	+	.	.
scaffold40874	subtractBed	intrn	72849	72896	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	72849	72896	69	+	.	.
scaffold40874	subtractBed	intrn	77450	77906	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	77450	77906	779	+	.	.
scaffold40874	subtractBed	intrn	79832	79918	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	79832	79918	77	+	.	.
scaffold40874	subtractBed	intrn	80491	80928	.	+	.	Parent=CGI_10004438;
	scaffold40874	WUBlastX	LINE_L1-Tx1	80491	80928	132	-	.	.
scaffold40874	subtractBed	intrn	89615	89679	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	89615	89679	130	+	.	.
scaffold40874	subtractBed	intrn	89965	89999	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	89965	89999	70	+	.	.
scaffold40874	subtractBed	intrn	91048	92702	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	91048	92702	2007	+	.	.
scaffold40874	subtractBed	intrn	96666	96828	.	+	.	Parent=CGI_10004438;
	scaffold40874	TRF	Tandem_Repeat	96666	96828	251	+	.	.
scaffold40894	subtractBed	intrn	34366	34718	.	+	.	Parent=CGI_10004536;
	scaffold40894	TRF	Tandem_Repeat	34366	34718	690	+	.	.
scaffold40894	subtractBed	intrn	34846	35241	.	+	.	Parent=CGI_10004536;
	scaffold40894	WUBlastX	DNA_En-Spm	34846	35241	168	-	.	.
scaffold40894	subtractBed	intrn	37065	37106	.	+	.	Parent=CGI_10004536;
	scaffold40894	TRF	Tandem_Repeat	37065	37106	84	+	.	.
scaffold40894	subtractBed	intrn	50173	51843	.	+	.	Parent=CGI_10004538;
	scaffold40894	WUBlastX	DNA_hAT	50173	51843	558	+	.	.
scaffold40894	subtractBed	intrn	56741	56804	.	+	.	Parent=CGI_10004538;
	scaffold40894	TRF	Tandem_Repeat	56741	56804	101	+	.	.
scaffold40894	subtractBed	intrn	56741	56804	.	-	.	Parent=CGI_10004539;
	scaffold40894	TRF	Tandem_Repeat	56741	56804	101	+	.	.
scaffold40894	subtractBed	intrn	68516	69872	.	-	.	Parent=CGI_10004539;
	scaffold40894	TRF	Tandem_Repeat	68516	69872	2023	+	.	.
scaffold40894	subtractBed	intrn	70034	70075	.	-	.	Parent=CGI_10004539;
	scaffold40894	TRF	Tandem_Repeat	70034	70075	50	+	.	.
scaffold40894	subtractBed	intrn	97251	98324	.	-	.	Parent=CGI_10004541;
	scaffold40894	WUBlastX	DNA_Kolobok	97251	98324	102	-	.	.
scaffold409	subtractBed	intrn	59293	59337	.	+	.	Parent=CGI_10004317;
	scaffold409	TRF	Tandem_Repeat	59293	59337	90	+	.	.
scaffold409	subtractBed	intrn	60209	60439	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	60209	60439	57	+	.	.
scaffold409	subtractBed	intrn	60242	60427	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	60242	60427	96	+	.	.
scaffold409	subtractBed	intrn	60555	60911	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	60555	60911	168	+	.	.
scaffold409	subtractBed	intrn	61093	61497	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	61093	61497	234	+	.	.
scaffold409	subtractBed	intrn	60454	60624	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	60454	60624	74	+	.	.
scaffold409	subtractBed	intrn	60615	60902	.	+	.	Parent=CGI_10004317;
	scaffold409	WUBlastX	DNA_TcMar-Marin	60615	60902	191	+	.	.
scaffold409	subtractBed	intrn	72297	72653	.	+	.	Parent=CGI_10004318;
	scaffold409	TRF	Tandem_Repeat	72288	72653	570	+	.	.
scaffold409	subtractBed	intrn	84136	84660	.	-	.	Parent=CGI_10004319;
	scaffold409	WUBlastX	LTR_Gypsy	84136	84660	29	-	.	.
scaffold409	subtractBed	intrn	90440	90481	.	-	.	Parent=CGI_10004319;
	scaffold409	TRF	Tandem_Repeat	90440	90481	84	+	.	.
scaffold40910	subtractBed	intrn	11725	11760	.	-	.	Parent=CGI_10004542;
	scaffold40910	TRF	Tandem_Repeat	11725	11760	72	+	.	.
scaffold40910	subtractBed	intrn	40979	41009	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	40979	41009	53	+	.	.
scaffold40910	subtractBed	intrn	45053	45152	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	45053	45152	102	+	.	.
scaffold40910	subtractBed	intrn	45056	45152	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	45056	45152	106	+	.	.
scaffold40910	subtractBed	intrn	55257	55619	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	55257	55619	649	+	.	.
scaffold40910	subtractBed	intrn	56252	58213	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	56252	58213	2860	+	.	.
scaffold40910	subtractBed	intrn	56252	58213	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	56252	58213	2908	+	.	.
scaffold40910	subtractBed	intrn	60033	60057	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	60033	60057	50	+	.	.
scaffold40910	subtractBed	intrn	61430	61589	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	61430	61589	108	+	.	.
scaffold40910	subtractBed	intrn	65493	65666	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	65493	65666	330	+	.	.
scaffold40910	subtractBed	intrn	72783	72989	.	-	.	Parent=CGI_10004546;
	scaffold40910	TRF	Tandem_Repeat	72783	72989	414	+	.	.
scaffold40910	subtractBed	intrn	72783	72989	.	+	.	Parent=CGI_10004547;
	scaffold40910	TRF	Tandem_Repeat	72783	72989	414	+	.	.
scaffold40910	subtractBed	intrn	73859	74506	.	+	.	Parent=CGI_10004547;
	scaffold40910	TRF	Tandem_Repeat	73859	74506	1107	+	.	.
scaffold40910	subtractBed	intrn	80037	80654	.	+	.	Parent=CGI_10004547;
	scaffold40910	TRF	Tandem_Repeat	80037	80654	970	+	.	.
scaffold40910	subtractBed	intrn	80037	80654	.	+	.	Parent=CGI_10004547;
	scaffold40910	TRF	Tandem_Repeat	80037	80654	988	+	.	.
scaffold40910	subtractBed	intrn	82084	82459	.	+	.	Parent=CGI_10004547;
	scaffold40910	TRF	Tandem_Repeat	82084	82459	581	+	.	.
scaffold40910	subtractBed	intrn	82084	82459	.	-	.	Parent=CGI_10004548;
	scaffold40910	TRF	Tandem_Repeat	82084	82459	581	+	.	.
scaffold40910	subtractBed	intrn	88871	88909	.	+	.	Parent=CGI_10004549;
	scaffold40910	TRF	Tandem_Repeat	88871	88909	78	+	.	.
scaffold40910	subtractBed	intrn	91894	92027	.	+	.	Parent=CGI_10004549;
	scaffold40910	TRF	Tandem_Repeat	91894	92027	85	+	.	.
scaffold40910	subtractBed	intrn	91871	92044	.	+	.	Parent=CGI_10004549;
	scaffold40910	TRF	Tandem_Repeat	91871	92044	279	+	.	.
scaffold40910	subtractBed	intrn	92891	92935	.	+	.	Parent=CGI_10004549;
	scaffold40910	TRF	Tandem_Repeat	92891	92935	90	+	.	.
scaffold40916	subtractBed	intrn	25027	25060	.	+	.	Parent=CGI_10004570;
	scaffold40916	TRF	Tandem_Repeat	25027	25060	50	+	.	.
scaffold40916	subtractBed	intrn	38278	38330	.	+	.	Parent=CGI_10004570;
	scaffold40916	TRF	Tandem_Repeat	38278	38330	70	+	.	.
scaffold40916	subtractBed	intrn	39879	39992	.	+	.	Parent=CGI_10004570;
	scaffold40916	WUBlastX	LINE_L1	39879	39992	27	+	.	.
scaffold40916	subtractBed	intrn	39214	39924	.	+	.	Parent=CGI_10004570;
	scaffold40916	WUBlastX	LINE_L1-Tx1	39214	39924	493	+	.	.
scaffold40916	subtractBed	intrn	39960	42962	.	+	.	Parent=CGI_10004570;
	scaffold40916	WUBlastX	LINE_L1-Tx1	39960	42962	1372	+	.	.
scaffold40916	subtractBed	intrn	38428	38901	.	+	.	Parent=CGI_10004570;
	scaffold40916	WUBlastX	LINE_L2	38428	38901	95	+	.	.
scaffold40916	subtractBed	intrn	38182	38928	.	+	.	Parent=CGI_10004570;
	scaffold40916	WUBlastX	LINE_L2	38182	38928	80	+	.	.
scaffold40916	subtractBed	intrn	51898	51928	.	+	.	Parent=CGI_10004570;
	scaffold40916	TRF	Tandem_Repeat	51898	51928	62	+	.	.
scaffold40916	subtractBed	intrn	25027	25060	.	-	.	Parent=CGI_10004571;
	scaffold40916	TRF	Tandem_Repeat	25027	25060	50	+	.	.
scaffold40916	subtractBed	intrn	68217	68879	.	-	.	Parent=CGI_10004574;
	scaffold40916	WUBlastX	LINE_RTE-X	68217	68879	173	-	.	.
scaffold40916	subtractBed	intrn	77265	77389	.	+	.	Parent=CGI_10004575;
	scaffold40916	TRF	Tandem_Repeat	77265	77389	214	+	.	.
scaffold40916	subtractBed	intrn	86871	86900	.	-	.	Parent=CGI_10004577;
	scaffold40916	TRF	Tandem_Repeat	86871	86900	60	+	.	.
scaffold40916	subtractBed	intrn	88930	88979	.	-	.	Parent=CGI_10004577;
	scaffold40916	TRF	Tandem_Repeat	88930	88979	82	+	.	.
scaffold40916	subtractBed	intrn	89045	89077	.	-	.	Parent=CGI_10004577;
	scaffold40916	TRF	Tandem_Repeat	89045	89077	66	+	.	.
scaffold40916	subtractBed	intrn	92859	93865	.	-	.	Parent=CGI_10004577;
	scaffold40916	TRF	Tandem_Repeat	92859	93865	1216	+	.	.
scaffold40916	subtractBed	intrn	92859	93851	.	-	.	Parent=CGI_10004577;
	scaffold40916	TRF	Tandem_Repeat	92859	93851	1245	+	.	.
scaffold40928	subtractBed	intrn	43171	43223	.	-	.	Parent=CGI_10004558;
	scaffold40928	TRF	Tandem_Repeat	43171	43223	60	+	.	.
scaffold40928	subtractBed	intrn	39700	39825	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_LOA	39700	39825	25	+	.	.
scaffold40928	subtractBed	intrn	40258	40599	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40258	40599	256	+	.	.
scaffold40928	subtractBed	intrn	40616	40807	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40616	40807	77	+	.	.
scaffold40928	subtractBed	intrn	40189	40599	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40189	40599	230	+	.	.
scaffold40928	subtractBed	intrn	40924	41166	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40924	41166	71	+	.	.
scaffold40928	subtractBed	intrn	40616	40774	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40616	40774	101	+	.	.
scaffold40928	subtractBed	intrn	40261	40704	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40261	40704	152	+	.	.
scaffold40928	subtractBed	intrn	40607	40849	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40607	40849	65	+	.	.
scaffold40928	subtractBed	intrn	40963	41166	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40963	41166	124	+	.	.
scaffold40928	subtractBed	intrn	39760	39825	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	39760	39825	40	+	.	.
scaffold40928	subtractBed	intrn	40031	40243	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	40031	40243	119	+	.	.
scaffold40928	subtractBed	intrn	41005	41241	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	41005	41241	76	+	.	.
scaffold40928	subtractBed	intrn	39772	40593	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_CR1	39772	40593	90	+	.	.
scaffold40928	subtractBed	intrn	52707	52733	.	-	.	Parent=CGI_10004558;
	scaffold40928	TRF	Tandem_Repeat	52707	52733	54	+	.	.
scaffold40928	subtractBed	intrn	64910	65299	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	DNA_Kolobok	64910	65299	49	+	.	.
scaffold40928	subtractBed	intrn	64952	65281	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	DNA_Kolobok	64952	65281	100	+	.	.
scaffold40928	subtractBed	intrn	65942	66136	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	DNA_Kolobok	65942	66136	76	-	.	.
scaffold40928	subtractBed	intrn	67073	67312	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	DNA_Kolobok	67073	67312	133	-	.	.
scaffold40928	subtractBed	intrn	67787	68047	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	DNA_Kolobok	67787	68047	25	-	.	.
scaffold40928	subtractBed	intrn	68906	69223	.	-	.	Parent=CGI_10004558;
	scaffold40928	WUBlastX	LINE_RTE-X	68906	69223	55	+	.	.
scaffold40938	subtractBed	intrn	74842	76062	.	-	.	Parent=CGI_10004534;
	scaffold40938	TRF	Tandem_Repeat	74842	76062	823	+	.	.
scaffold40938	subtractBed	intrn	74902	76067	.	-	.	Parent=CGI_10004534;
	scaffold40938	TRF	Tandem_Repeat	74902	76067	957	+	.	.
scaffold40938	subtractBed	intrn	80479	80907	.	-	.	Parent=CGI_10004534;
	scaffold40938	TRF	Tandem_Repeat	80479	80951	739	+	.	.
scaffold40938	subtractBed	intrn	85779	85895	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	85779	85895	234	+	.	.
scaffold40938	subtractBed	intrn	85797	85895	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	85797	85895	63	+	.	.
scaffold40938	subtractBed	intrn	90281	90398	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	90281	90398	78	+	.	.
scaffold40938	subtractBed	intrn	91284	91412	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	91284	91412	117	+	.	.
scaffold40938	subtractBed	intrn	92143	92464	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	92143	92464	276	+	.	.
scaffold40938	subtractBed	intrn	92941	93510	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	92941	93510	971	+	.	.
scaffold40938	subtractBed	intrn	95241	95979	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	95241	95979	1221	+	.	.
scaffold40938	subtractBed	intrn	95283	95391	.	+	.	Parent=CGI_10004535;
	scaffold40938	TRF	Tandem_Repeat	95283	95391	80	+	.	.
scaffold40948	subtractBed	intrn	44713	44908	.	+	.	Parent=CGI_10004611;
	scaffold40948	TRF	Tandem_Repeat	44713	44908	144	+	.	.
scaffold40948	subtractBed	intrn	44681	44914	.	+	.	Parent=CGI_10004611;
	scaffold40948	TRF	Tandem_Repeat	44681	44914	181	+	.	.
scaffold40948	subtractBed	intrn	44752	44914	.	+	.	Parent=CGI_10004611;
	scaffold40948	TRF	Tandem_Repeat	44752	44914	177	+	.	.
scaffold40948	subtractBed	intrn	98630	99130	.	+	.	Parent=CGI_10004613;
	scaffold40948	WUBlastX	LINE_L2	98630	99130	81	+	.	.
scaffold40948	subtractBed	intrn	98627	99028	.	+	.	Parent=CGI_10004613;
	scaffold40948	WUBlastX	LINE_CR1-L2	98627	99028	110	+	.	.
scaffold40950	subtractBed	intrn	63362	63411	.	-	.	Parent=CGI_10004590;
	scaffold40950	TRF	Tandem_Repeat	63362	63411	55	+	.	.
scaffold40950	subtractBed	intrn	63811	63861	.	-	.	Parent=CGI_10004590;
	scaffold40950	TRF	Tandem_Repeat	63811	63861	102	+	.	.
scaffold40950	subtractBed	intrn	64204	64323	.	-	.	Parent=CGI_10004590;
	scaffold40950	WUBlastX	LINE_RTE-X	64204	64323	80	+	.	.
scaffold40950	subtractBed	intrn	64186	64377	.	-	.	Parent=CGI_10004590;
	scaffold40950	WUBlastX	LINE_RTE-X	64186	64377	78	+	.	.
scaffold40950	subtractBed	intrn	65876	65929	.	-	.	Parent=CGI_10004590;
	scaffold40950	TRF	Tandem_Repeat	65876	65929	65	+	.	.
scaffold40952	subtractBed	intrn	43862	43905	.	-	.	Parent=CGI_10004593;
	scaffold40952	TRF	Tandem_Repeat	43862	43905	63	+	.	.
scaffold40952	subtractBed	intrn	44307	44337	.	-	.	Parent=CGI_10004593;
	scaffold40952	TRF	Tandem_Repeat	44307	44337	62	+	.	.
scaffold40952	subtractBed	intrn	56465	56466	.	+	.	Parent=CGI_10004594;
	scaffold40952	WUBlastX	DNA_Kolobok-Hyd	56413	56466	25	+	.	.
scaffold40952	subtractBed	intrn	56541	56547	.	+	.	Parent=CGI_10004594;
	scaffold40952	WUBlastX	DNA_Kolobok-Hyd	56541	56747	26	+	.	.
scaffold40952	subtractBed	intrn	85159	86036	.	-	.	Parent=CGI_10004595;
	scaffold40952	TRF	Tandem_Repeat	85159	86036	1339	+	.	.
scaffold40960	subtractBed	intrn	5569	6004	.	-	.	Parent=CGI_10004560;
	scaffold40960	TRF	Tandem_Repeat	5569	6026	790	+	.	.
scaffold40960	subtractBed	intrn	6950	7279	.	-	.	Parent=CGI_10004560;
	scaffold40960	WUBlastX	LINE_RTE-X	6950	7279	162	-	.	.
scaffold40960	subtractBed	intrn	6950	7408	.	-	.	Parent=CGI_10004560;
	scaffold40960	WUBlastX	LINE_RTE-X	6950	7408	120	-	.	.
scaffold40960	subtractBed	intrn	13969	14363	.	-	.	Parent=CGI_10004560;
	scaffold40960	TRF	Tandem_Repeat	13969	14363	677	+	.	.
scaffold40960	subtractBed	intrn	57432	58395	.	+	.	Parent=CGI_10004565;
	scaffold40960	TRF	Tandem_Repeat	57432	58395	1289	+	.	.
scaffold40960	subtractBed	intrn	57432	57720	.	+	.	Parent=CGI_10004565;
	scaffold40960	TRF	Tandem_Repeat	57432	57720	506	+	.	.
scaffold40960	subtractBed	intrn	57749	58395	.	+	.	Parent=CGI_10004565;
	scaffold40960	TRF	Tandem_Repeat	57749	58395	950	+	.	.
scaffold40960	subtractBed	intrn	63117	63260	.	+	.	Parent=CGI_10004565;
	scaffold40960	TRF	Tandem_Repeat	63117	63260	184	+	.	.
scaffold40960	subtractBed	intrn	85430	87712	.	+	.	Parent=CGI_10004567;
	scaffold40960	TRF	Tandem_Repeat	85430	87712	3542	+	.	.
scaffold40960	subtractBed	intrn	91115	91280	.	+	.	Parent=CGI_10004567;
	scaffold40960	TRF	Tandem_Repeat	91115	91280	251	+	.	.
scaffold40980	subtractBed	intrn	390	422	.	+	.	Parent=CGI_10004601;
	scaffold40980	TRF	Tandem_Repeat	390	422	66	+	.	.
scaffold40980	subtractBed	intrn	3501	3533	.	+	.	Parent=CGI_10004601;
	scaffold40980	TRF	Tandem_Repeat	3501	3533	57	+	.	.
scaffold40980	subtractBed	intrn	7340	7374	.	+	.	Parent=CGI_10004601;
	scaffold40980	TRF	Tandem_Repeat	7340	7374	70	+	.	.
scaffold40980	subtractBed	intrn	31715	31759	.	-	.	Parent=CGI_10004604;
	scaffold40980	TRF	Tandem_Repeat	31715	31759	90	+	.	.
scaffold40980	subtractBed	intrn	89522	89803	.	-	.	Parent=CGI_10004606;
	scaffold40980	WUBlastX	LINE_L2	89522	89803	95	-	.	.
scaffold40982	subtractBed	intrn	28634	28744	.	+	.	Parent=CGI_10004617;
	scaffold40982	TRF	Tandem_Repeat	28634	28744	64	+	.	.
scaffold40982	subtractBed	intrn	28616	28724	.	+	.	Parent=CGI_10004617;
	scaffold40982	TRF	Tandem_Repeat	28616	28724	51	+	.	.
scaffold410	subtractBed	intrn	81608	81648	.	+	.	Parent=CGI_10020617;
	scaffold410	TRF	Tandem_Repeat	81608	81648	82	+	.	.
scaffold410	subtractBed	intrn	140025	140934	.	+	.	Parent=CGI_10020618;
	scaffold410	TRF	Tandem_Repeat	140025	140934	1397	+	.	.
scaffold410	subtractBed	intrn	158353	158701	.	-	.	Parent=CGI_10020622;
	scaffold410	TRF	Tandem_Repeat	158353	158701	195	+	.	.
scaffold410	subtractBed	intrn	158451	158701	.	-	.	Parent=CGI_10020622;
	scaffold410	TRF	Tandem_Repeat	158451	158701	152	+	.	.
scaffold410	subtractBed	intrn	173766	173803	.	+	.	Parent=CGI_10020624;
	scaffold410	TRF	Tandem_Repeat	173766	173803	76	+	.	.
scaffold410	subtractBed	intrn	226203	226250	.	+	.	Parent=CGI_10020627;
	scaffold410	TRF	Tandem_Repeat	226203	226250	82	+	.	.
scaffold410	subtractBed	intrn	265598	265690	.	+	.	Parent=CGI_10020632;
	scaffold410	WUBlastX	LINE_L1-Tx1	265598	265690	28	+	.	.
scaffold410	subtractBed	intrn	265586	265630	.	+	.	Parent=CGI_10020632;
	scaffold410	WUBlastX	LINE_CR1	265586	265630	22	+	.	.
scaffold410	subtractBed	intrn	265574	265651	.	+	.	Parent=CGI_10020632;
	scaffold410	WUBlastX	LINE_L2	265574	265651	22	+	.	.
scaffold410	subtractBed	intrn	262869	263051	.	+	.	Parent=CGI_10020632;
	scaffold410	WUBlastX	LINE_RTE-BovB	262869	263051	43	+	.	.
scaffold410	subtractBed	intrn	263416	265248	.	+	.	Parent=CGI_10020632;
	scaffold410	WUBlastX	LINE_CR1	263416	265248	1324	+	.	.
scaffold410	subtractBed	intrn	289698	289851	.	-	.	Parent=CGI_10020633;
	scaffold410	TRF	Tandem_Repeat	289698	289851	245	+	.	.
scaffold410	subtractBed	intrn	298754	299068	.	+	.	Parent=CGI_10020635;
	scaffold410	TRF	Tandem_Repeat	298754	299068	400	+	.	.
scaffold410	subtractBed	intrn	306341	306589	.	+	.	Parent=CGI_10020635;
	scaffold410	TRF	Tandem_Repeat	306341	306589	417	+	.	.
scaffold410	subtractBed	intrn	299546	300592	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	299546	300592	554	-	.	.
scaffold410	subtractBed	intrn	305593	305913	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	305593	305913	29	-	.	.
scaffold410	subtractBed	intrn	302394	303392	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	302394	303392	180	-	.	.
scaffold410	subtractBed	intrn	304348	304536	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LINE_RTE-X	304348	304536	65	-	.	.
scaffold410	subtractBed	intrn	300343	302370	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	300343	302370	1294	-	.	.
scaffold410	subtractBed	intrn	302352	302960	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	302352	302960	199	-	.	.
scaffold410	subtractBed	intrn	305542	305790	.	+	.	Parent=CGI_10020635;
	scaffold410	WUBlastX	LTR_DIRS	305542	305790	26	-	.	.
scaffold410	subtractBed	intrn	309482	309714	.	+	.	Parent=CGI_10020635;
	scaffold410	TRF	Tandem_Repeat	309482	309714	194	+	.	.
scaffold410	subtractBed	intrn	314082	314376	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	314082	314376	278	+	.	.
scaffold410	subtractBed	intrn	315564	315730	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	315557	315730	253	+	.	.
scaffold410	subtractBed	intrn	316835	317386	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	316835	317386	971	+	.	.
scaffold410	subtractBed	intrn	318478	318616	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	318478	318616	111	+	.	.
scaffold410	subtractBed	intrn	320344	320405	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	320344	320405	90	+	.	.
scaffold410	subtractBed	intrn	323388	323439	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	323388	323439	50	+	.	.
scaffold410	subtractBed	intrn	323383	323469	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	323374	323469	147	+	.	.
scaffold410	subtractBed	intrn	332900	332958	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	332900	332958	60	+	.	.
scaffold410	subtractBed	intrn	333530	333585	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	333530	333585	55	+	.	.
scaffold410	subtractBed	intrn	333511	333585	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	333511	333585	61	+	.	.
scaffold410	subtractBed	intrn	333531	333619	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	333531	333619	67	+	.	.
scaffold410	subtractBed	intrn	333920	334039	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	333920	334039	113	+	.	.
scaffold410	subtractBed	intrn	333932	334045	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	333932	334045	111	+	.	.
scaffold410	subtractBed	intrn	334191	334252	.	+	.	Parent=CGI_10020636;
	scaffold410	TRF	Tandem_Repeat	334191	334252	61	+	.	.
scaffold410	subtractBed	intrn	362700	363508	.	+	.	Parent=CGI_10020637;
	scaffold410	TRF	Tandem_Repeat	362700	363508	1171	+	.	.
scaffold410	subtractBed	intrn	364391	364470	.	+	.	Parent=CGI_10020637;
	scaffold410	TRF	Tandem_Repeat	364391	364470	56	+	.	.
scaffold410	subtractBed	intrn	367731	368071	.	+	.	Parent=CGI_10020637;
	scaffold410	TRF	Tandem_Repeat	367731	368071	547	+	.	.
scaffold410	subtractBed	intrn	368126	368505	.	+	.	Parent=CGI_10020637;
	scaffold410	TRF	Tandem_Repeat	368126	368505	258	+	.	.
scaffold410	subtractBed	intrn	385763	385956	.	-	.	Parent=CGI_10020638;
	scaffold410	TRF	Tandem_Repeat	385763	385956	295	+	.	.
scaffold410	subtractBed	intrn	385914	386173	.	-	.	Parent=CGI_10020638;
	scaffold410	TRF	Tandem_Repeat	385914	386173	412	+	.	.
scaffold410	subtractBed	intrn	386138	386288	.	-	.	Parent=CGI_10020638;
	scaffold410	TRF	Tandem_Repeat	386138	386297	257	+	.	.
scaffold410	subtractBed	intrn	400699	400936	.	+	.	Parent=CGI_10020639;
	scaffold410	TRF	Tandem_Repeat	400699	400936	377	+	.	.
scaffold410	subtractBed	intrn	405021	405676	.	+	.	Parent=CGI_10020640;
	scaffold410	TRF	Tandem_Repeat	405021	405676	756	+	.	.
scaffold410	subtractBed	intrn	415694	415733	.	-	.	Parent=CGI_10020641;
	scaffold410	TRF	Tandem_Repeat	415694	415733	71	+	.	.
scaffold410	subtractBed	intrn	418999	419044	.	-	.	Parent=CGI_10020641;
	scaffold410	TRF	Tandem_Repeat	418999	419044	83	+	.	.
scaffold410	subtractBed	intrn	419594	419721	.	-	.	Parent=CGI_10020641;
	scaffold410	TRF	Tandem_Repeat	419594	419721	229	+	.	.
scaffold410	subtractBed	intrn	427352	427542	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	427352	427542	330	+	.	.
scaffold410	subtractBed	intrn	428768	429102	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	428768	429102	543	+	.	.
scaffold410	subtractBed	intrn	428768	429102	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	428768	429102	547	+	.	.
scaffold410	subtractBed	intrn	434563	435498	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	434563	435498	1227	+	.	.
scaffold410	subtractBed	intrn	434563	435503	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	434563	435503	1141	+	.	.
scaffold410	subtractBed	intrn	456952	456987	.	+	.	Parent=CGI_10020643;
	scaffold410	TRF	Tandem_Repeat	456952	456987	72	+	.	.
scaffold410	subtractBed	intrn	550630	550672	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	550630	550672	70	+	.	.
scaffold410	subtractBed	intrn	550622	550671	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	550622	550671	57	+	.	.
scaffold410	subtractBed	intrn	550622	550671	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	550622	550671	66	+	.	.
scaffold410	subtractBed	intrn	551124	551161	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	551124	551161	69	+	.	.
scaffold410	subtractBed	intrn	559513	559563	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	559513	559563	93	+	.	.
scaffold410	subtractBed	intrn	560858	561131	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	560858	561131	263	+	.	.
scaffold410	subtractBed	intrn	560858	561128	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	560858	561128	298	+	.	.
scaffold410	subtractBed	intrn	561989	562158	.	+	.	Parent=CGI_10020647;
	scaffold410	TRF	Tandem_Repeat	561989	562158	218	+	.	.
scaffold410	subtractBed	intrn	638986	639012	.	+	.	Parent=CGI_10020651;
	scaffold410	TRF	Tandem_Repeat	638986	639012	54	+	.	.
scaffold41014	subtractBed	intrn	68526	68558	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	68526	68558	66	+	.	.
scaffold41014	subtractBed	intrn	68591	68694	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	68591	68694	88	+	.	.
scaffold41014	subtractBed	intrn	68610	68710	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	68610	68710	130	+	.	.
scaffold41014	subtractBed	intrn	66386	66664	.	-	.	Parent=CGI_10004639;
	scaffold41014	WUBlastX	DNA_Crypton	66386	66664	41	-	.	.
scaffold41014	subtractBed	intrn	66742	66951	.	-	.	Parent=CGI_10004639;
	scaffold41014	WUBlastX	DNA_Crypton	66742	66951	60	-	.	.
scaffold41014	subtractBed	intrn	76691	76769	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	76691	76769	79	+	.	.
scaffold41014	subtractBed	intrn	76696	76769	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	76696	76769	68	+	.	.
scaffold41014	subtractBed	intrn	76700	76769	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	76700	76769	72	+	.	.
scaffold41014	subtractBed	intrn	82120	82226	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	82120	82226	117	+	.	.
scaffold41014	subtractBed	intrn	86876	89585	.	-	.	Parent=CGI_10004639;
	scaffold41014	TRF	Tandem_Repeat	86876	89585	3286	+	.	.
scaffold41022	subtractBed	intrn	17235	17282	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	17235	17282	55	+	.	.
scaffold41022	subtractBed	intrn	27015	27076	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	27015	27076	124	+	.	.
scaffold41022	subtractBed	intrn	27142	27180	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	27142	27180	53	+	.	.
scaffold41022	subtractBed	intrn	32946	33227	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	32946	33227	546	+	.	.
scaffold41022	subtractBed	intrn	37811	37838	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	37811	37838	56	+	.	.
scaffold41022	subtractBed	intrn	38514	38557	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	38514	38557	88	+	.	.
scaffold41022	subtractBed	intrn	38944	39129	.	-	.	Parent=CGI_10004635;
	scaffold41022	TRF	Tandem_Repeat	38944	39129	322	+	.	.
scaffold41022	subtractBed	intrn	55310	55367	.	+	.	Parent=CGI_10004636;
	scaffold41022	TRF	Tandem_Repeat	55310	55367	98	+	.	.
scaffold41022	subtractBed	intrn	55481	55506	.	+	.	Parent=CGI_10004636;
	scaffold41022	TRF	Tandem_Repeat	55481	55506	52	+	.	.
scaffold41022	subtractBed	intrn	93462	93940	.	+	.	Parent=CGI_10004637;
	scaffold41022	TRF	Tandem_Repeat	93462	93940	411	+	.	.
scaffold41022	subtractBed	intrn	98025	98156	.	+	.	Parent=CGI_10004637;
	scaffold41022	WUBlastX	LINE_RTE-X	98025	98156	46	-	.	.
scaffold41022	subtractBed	intrn	97718	98002	.	+	.	Parent=CGI_10004637;
	scaffold41022	WUBlastX	LINE_RTE-X	97718	98002	35	-	.	.
scaffold41022	subtractBed	intrn	101395	101586	.	+	.	Parent=CGI_10004637;
	scaffold41022	TRF	Tandem_Repeat	101395	101586	215	+	.	.
scaffold41022	subtractBed	intrn	101586	101690	.	+	.	Parent=CGI_10004637;
	scaffold41022	TRF	Tandem_Repeat	101586	101690	104	+	.	.
scaffold41022	subtractBed	intrn	101603	101759	.	+	.	Parent=CGI_10004637;
	scaffold41022	TRF	Tandem_Repeat	101603	101759	161	+	.	.
scaffold41022	subtractBed	intrn	103213	103254	.	+	.	Parent=CGI_10004637;
	scaffold41022	TRF	Tandem_Repeat	103213	103254	77	+	.	.
scaffold41034	subtractBed	intrn	14010	14102	.	-	.	Parent=CGI_10004649;
	scaffold41034	TRF	Tandem_Repeat	14010	14102	170	+	.	.
scaffold41034	subtractBed	intrn	15956	16230	.	-	.	Parent=CGI_10004649;
	scaffold41034	TRF	Tandem_Repeat	15956	16230	324	+	.	.
scaffold41034	subtractBed	intrn	17298	17524	.	-	.	Parent=CGI_10004649;
	scaffold41034	TRF	Tandem_Repeat	17298	17524	237	+	.	.
scaffold41034	subtractBed	intrn	17298	17524	.	-	.	Parent=CGI_10004649;
	scaffold41034	TRF	Tandem_Repeat	17298	17524	271	+	.	.
scaffold41034	subtractBed	intrn	39916	39973	.	-	.	Parent=CGI_10004650;
	scaffold41034	TRF	Tandem_Repeat	39916	39973	107	+	.	.
scaffold41034	subtractBed	intrn	42981	43995	.	-	.	Parent=CGI_10004650;
	scaffold41034	TRF	Tandem_Repeat	42981	43995	963	+	.	.
scaffold41034	subtractBed	intrn	42981	43995	.	+	.	Parent=CGI_10004651;
	scaffold41034	TRF	Tandem_Repeat	42981	43995	963	+	.	.
scaffold41034	subtractBed	intrn	57934	58020	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	57934	58020	54	+	.	.
scaffold41034	subtractBed	intrn	58020	58382	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	58020	58382	187	+	.	.
scaffold41034	subtractBed	intrn	58402	58653	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	58402	58653	79	+	.	.
scaffold41034	subtractBed	intrn	58402	58713	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	58402	58713	67	+	.	.
scaffold41034	subtractBed	intrn	56996	57256	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	DNA_Academ	56996	57256	72	+	.	.
scaffold41034	subtractBed	intrn	58754	58849	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	58754	58849	53	+	.	.
scaffold41034	subtractBed	intrn	59281	59448	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	59281	59448	100	+	.	.
scaffold41034	subtractBed	intrn	58658	58822	.	+	.	Parent=CGI_10004651;
	scaffold41034	WUBlastX	LTR_DIRS	58658	58822	24	+	.	.
scaffold41054	subtractBed	intrn	16272	16303	.	-	.	Parent=CGI_10004673;
	scaffold41054	TRF	Tandem_Repeat	16272	16303	64	+	.	.
scaffold41054	subtractBed	intrn	23374	23526	.	-	.	Parent=CGI_10004673;
	scaffold41054	TRF	Tandem_Repeat	23374	23526	162	+	.	.
scaffold41054	subtractBed	intrn	20144	20590	.	-	.	Parent=CGI_10004673;
	scaffold41054	WUBlastX	DNA_hAT-Tip100	20144	20590	101	-	.	.
scaffold41054	subtractBed	intrn	29527	29597	.	-	.	Parent=CGI_10004673;
	scaffold41054	TRF	Tandem_Repeat	29527	29597	63	+	.	.
scaffold41054	subtractBed	intrn	37088	37760	.	-	.	Parent=CGI_10004673;
	scaffold41054	TRF	Tandem_Repeat	37088	37760	895	+	.	.
scaffold41054	subtractBed	intrn	35884	36171	.	-	.	Parent=CGI_10004673;
	scaffold41054	WUBlastX	DNA_TcMar-Marin	35884	36171	167	-	.	.
scaffold41054	subtractBed	intrn	35288	35695	.	-	.	Parent=CGI_10004673;
	scaffold41054	WUBlastX	DNA_TcMar-Marin	35288	35695	211	-	.	.
scaffold41054	subtractBed	intrn	36165	36542	.	-	.	Parent=CGI_10004673;
	scaffold41054	WUBlastX	DNA_TcMar-Marin	36165	36542	153	-	.	.
scaffold41064	subtractBed	intrn	7562	8321	.	+	.	Parent=CGI_10004654;
	scaffold41064	TRF	Tandem_Repeat	7562	8321	475	+	.	.
scaffold41064	subtractBed	intrn	8704	8907	.	+	.	Parent=CGI_10004654;
	scaffold41064	TRF	Tandem_Repeat	8704	8907	98	+	.	.
scaffold41064	subtractBed	intrn	8672	9140	.	+	.	Parent=CGI_10004654;
	scaffold41064	TRF	Tandem_Repeat	8672	9140	598	+	.	.
scaffold41064	subtractBed	intrn	8643	9140	.	+	.	Parent=CGI_10004654;
	scaffold41064	TRF	Tandem_Repeat	8643	9140	621	+	.	.
scaffold41064	subtractBed	intrn	19929	20069	.	+	.	Parent=CGI_10004655;
	scaffold41064	TRF	Tandem_Repeat	19929	20069	212	+	.	.
scaffold41064	subtractBed	intrn	28718	28807	.	-	.	Parent=CGI_10004656;
	scaffold41064	TRF	Tandem_Repeat	28718	28807	171	+	.	.
scaffold41064	subtractBed	intrn	30048	30187	.	-	.	Parent=CGI_10004656;
	scaffold41064	TRF	Tandem_Repeat	30048	30187	253	+	.	.
scaffold41064	subtractBed	intrn	30202	30590	.	-	.	Parent=CGI_10004656;
	scaffold41064	TRF	Tandem_Repeat	30202	30590	360	+	.	.
scaffold41064	subtractBed	intrn	32022	32065	.	-	.	Parent=CGI_10004656;
	scaffold41064	TRF	Tandem_Repeat	32022	32065	88	+	.	.
scaffold41064	subtractBed	intrn	50008	50245	.	+	.	Parent=CGI_10004658;
	scaffold41064	TRF	Tandem_Repeat	50008	50245	169	+	.	.
scaffold41064	subtractBed	intrn	50261	51307	.	+	.	Parent=CGI_10004658;
	scaffold41064	TRF	Tandem_Repeat	50261	51307	856	+	.	.
scaffold41064	subtractBed	intrn	55576	55600	.	+	.	Parent=CGI_10004659;
	scaffold41064	TRF	Tandem_Repeat	55576	55600	50	+	.	.
scaffold41064	subtractBed	intrn	58470	58518	.	+	.	Parent=CGI_10004659;
	scaffold41064	TRF	Tandem_Repeat	58470	58518	89	+	.	.
scaffold41082	subtractBed	intrn	102522	102554	.	+	.	Parent=CGI_10004679;
	scaffold41082	TRF	Tandem_Repeat	102522	102554	57	+	.	.
scaffold41086	subtractBed	intrn	33763	33830	.	-	.	Parent=CGI_10004692;
	scaffold41086	TRF	Tandem_Repeat	33763	33830	136	+	.	.
scaffold41086	subtractBed	intrn	36842	36978	.	-	.	Parent=CGI_10004693;
	scaffold41086	TRF	Tandem_Repeat	36842	36978	211	+	.	.
scaffold41086	subtractBed	intrn	42210	42246	.	-	.	Parent=CGI_10004693;
	scaffold41086	TRF	Tandem_Repeat	42210	42246	74	+	.	.
scaffold41136	subtractBed	intrn	13864	13908	.	-	.	Parent=CGI_10004724;
	scaffold41136	TRF	Tandem_Repeat	13864	13908	72	+	.	.
scaffold41136	subtractBed	intrn	13864	13908	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	13864	13908	72	+	.	.
scaffold41136	subtractBed	intrn	25736	25774	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	25736	25774	51	+	.	.
scaffold41136	subtractBed	intrn	25944	26799	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	25944	26799	1298	+	.	.
scaffold41136	subtractBed	intrn	42617	42644	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	42617	42644	56	+	.	.
scaffold41136	subtractBed	intrn	47055	47117	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	47055	47117	117	+	.	.
scaffold41136	subtractBed	intrn	66318	66369	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	66318	66369	59	+	.	.
scaffold41136	subtractBed	intrn	66323	66372	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	66323	66372	64	+	.	.
scaffold41136	subtractBed	intrn	66343	66372	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	66343	66372	51	+	.	.
scaffold41136	subtractBed	intrn	69605	69640	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	69605	69640	72	+	.	.
scaffold41136	subtractBed	intrn	69951	69983	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	69951	69983	66	+	.	.
scaffold41136	subtractBed	intrn	74043	74098	.	+	.	Parent=CGI_10004725;
	scaffold41136	TRF	Tandem_Repeat	74043	74098	112	+	.	.
scaffold41162	subtractBed	intrn	4895	5860	.	+	.	Parent=CGI_10004774;
	scaffold41162	TRF	Tandem_Repeat	4895	5860	1468	+	.	.
scaffold41162	subtractBed	intrn	10419	10465	.	+	.	Parent=CGI_10004774;
	scaffold41162	TRF	Tandem_Repeat	10419	10465	94	+	.	.
scaffold41162	subtractBed	intrn	71265	71267	.	+	.	Parent=CGI_10004776;
	scaffold41162	WUBlastX	DNA_IS4EU	70872	71267	76	+	.	.
scaffold41162	subtractBed	intrn	93607	94280	.	+	.	Parent=CGI_10004777;
	scaffold41162	TRF	Tandem_Repeat	93607	94280	685	+	.	.
scaffold41162	subtractBed	intrn	89296	89577	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy-Cigr	89296	89577	147	-	.	.
scaffold41162	subtractBed	intrn	89894	90043	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy-Cigr	89894	90043	132	-	.	.
scaffold41162	subtractBed	intrn	88937	90127	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy	88937	90127	87	-	.	.
scaffold41162	subtractBed	intrn	88562	89326	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy	88562	89326	185	-	.	.
scaffold41162	subtractBed	intrn	88697	89347	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy-Cigr	88697	89347	315	-	.	.
scaffold41162	subtractBed	intrn	89332	89649	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy-Cigr	89332	89649	145	-	.	.
scaffold41162	subtractBed	intrn	90045	90170	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_Gypsy	90045	90170	113	-	.	.
scaffold41162	subtractBed	intrn	90198	90443	.	+	.	Parent=CGI_10004777;
	scaffold41162	WUBlastX	LTR_ERV1	90198	90443	27	-	.	.
scaffold41164	subtractBed	intrn	19457	19528	.	+	.	Parent=CGI_10004760;
	scaffold41164	TRF	Tandem_Repeat	19457	19528	135	+	.	.
scaffold41164	subtractBed	intrn	20936	21043	.	+	.	Parent=CGI_10004760;
	scaffold41164	TRF	Tandem_Repeat	20936	21043	128	+	.	.
scaffold41164	subtractBed	intrn	94194	94247	.	-	.	Parent=CGI_10004764;
	scaffold41164	TRF	Tandem_Repeat	94194	94247	108	+	.	.
scaffold41164	subtractBed	intrn	86818	87090	.	-	.	Parent=CGI_10004764;
	scaffold41164	WUBlastX	LINE_RTE-X	86818	87090	76	+	.	.
scaffold41164	subtractBed	intrn	86755	87042	.	-	.	Parent=CGI_10004764;
	scaffold41164	WUBlastX	LINE_RTE-X	86755	87042	45	+	.	.
scaffold41164	subtractBed	intrn	86818	87024	.	-	.	Parent=CGI_10004764;
	scaffold41164	WUBlastX	LINE_RTE-X	86818	87024	84	+	.	.
scaffold41164	subtractBed	intrn	99688	99738	.	-	.	Parent=CGI_10004764;
	scaffold41164	TRF	Tandem_Repeat	99688	99738	93	+	.	.
scaffold41174	subtractBed	intrn	39079	40663	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	39079	40663	2176	+	.	.
scaffold41174	subtractBed	intrn	39803	40663	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	39803	40663	1085	+	.	.
scaffold41174	subtractBed	intrn	41354	41470	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	41354	41470	94	+	.	.
scaffold41174	subtractBed	intrn	41892	41943	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	41892	41943	95	+	.	.
scaffold41174	subtractBed	intrn	57459	57491	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	57459	57491	66	+	.	.
scaffold41174	subtractBed	intrn	58556	58587	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	58556	58587	64	+	.	.
scaffold41174	subtractBed	intrn	60706	61429	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	60706	61429	1000	+	.	.
scaffold41174	subtractBed	intrn	61484	62086	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_RTE-X	61484	62086	103	+	.	.
scaffold41174	subtractBed	intrn	61610	61990	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_RTE-X	61610	61990	114	+	.	.
scaffold41174	subtractBed	intrn	66656	66721	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	66656	66721	50	+	.	.
scaffold41174	subtractBed	intrn	68746	68806	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	68746	68806	95	+	.	.
scaffold41174	subtractBed	intrn	69401	69622	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_RTE-X	69401	69622	135	+	.	.
scaffold41174	subtractBed	intrn	69562	70299	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_RTE-X	69562	70299	103	+	.	.
scaffold41174	subtractBed	intrn	69000	69470	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_RTE-X	69000	69470	200	+	.	.
scaffold41174	subtractBed	intrn	68925	69392	.	-	.	Parent=CGI_10004794;
	scaffold41174	WUBlastX	LINE_DRE	68925	69392	34	+	.	.
scaffold41174	subtractBed	intrn	82697	83316	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	82697	83316	168	+	.	.
scaffold41174	subtractBed	intrn	82696	83316	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	82696	83316	489	+	.	.
scaffold41174	subtractBed	intrn	83138	83336	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	83138	83336	267	+	.	.
scaffold41174	subtractBed	intrn	83352	83382	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	83352	83382	55	+	.	.
scaffold41174	subtractBed	intrn	86027	87114	.	-	.	Parent=CGI_10004794;
	scaffold41174	TRF	Tandem_Repeat	86027	87114	1908	+	.	.
scaffold41174	subtractBed	intrn	102514	102557	.	-	.	Parent=CGI_10004795;
	scaffold41174	TRF	Tandem_Repeat	102514	102557	52	+	.	.
scaffold41174	subtractBed	intrn	102514	102558	.	-	.	Parent=CGI_10004795;
	scaffold41174	TRF	Tandem_Repeat	102514	102558	63	+	.	.
scaffold412	subtractBed	intrn	18165	18274	.	-	.	Parent=CGI_10018557;
	scaffold412	TRF	Tandem_Repeat	18165	18274	123	+	.	.
scaffold412	subtractBed	intrn	20153	20188	.	-	.	Parent=CGI_10018557;
	scaffold412	TRF	Tandem_Repeat	20153	20188	72	+	.	.
scaffold412	subtractBed	intrn	20477	20624	.	-	.	Parent=CGI_10018557;
	scaffold412	TRF	Tandem_Repeat	20477	20624	181	+	.	.
scaffold412	subtractBed	intrn	21116	21223	.	-	.	Parent=CGI_10018557;
	scaffold412	TRF	Tandem_Repeat	21116	21223	130	+	.	.
scaffold412	subtractBed	intrn	21114	21232	.	-	.	Parent=CGI_10018557;
	scaffold412	TRF	Tandem_Repeat	21114	21232	105	+	.	.
scaffold412	subtractBed	intrn	67769	67806	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	67769	67806	58	+	.	.
scaffold412	subtractBed	intrn	67769	67818	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	67769	67818	73	+	.	.
scaffold412	subtractBed	intrn	73060	73275	.	-	.	Parent=CGI_10018559;
	scaffold412	WUBlastX	LTR_Ngaro	73060	73275	67	+	.	.
scaffold412	subtractBed	intrn	73280	73465	.	-	.	Parent=CGI_10018559;
	scaffold412	WUBlastX	LTR_Ngaro	73280	73465	92	+	.	.
scaffold412	subtractBed	intrn	73099	73275	.	-	.	Parent=CGI_10018559;
	scaffold412	WUBlastX	LTR_Ngaro	73099	73275	73	+	.	.
scaffold412	subtractBed	intrn	79069	79127	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	79069	79127	55	+	.	.
scaffold412	subtractBed	intrn	79077	79140	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	79077	79140	74	+	.	.
scaffold412	subtractBed	intrn	102828	102870	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	102828	102870	86	+	.	.
scaffold412	subtractBed	intrn	104998	106175	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	104998	106175	1234	+	.	.
scaffold412	subtractBed	intrn	108491	108548	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	108491	108548	98	+	.	.
scaffold412	subtractBed	intrn	113168	113266	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	113168	113266	74	+	.	.
scaffold412	subtractBed	intrn	114926	114984	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	114926	114984	100	+	.	.
scaffold412	subtractBed	intrn	117488	118248	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	117488	118248	611	+	.	.
scaffold412	subtractBed	intrn	125024	125329	.	-	.	Parent=CGI_10018559;
	scaffold412	WUBlastX	LTR_Ngaro	125024	125329	81	+	.	.
scaffold412	subtractBed	intrn	124922	125329	.	-	.	Parent=CGI_10018559;
	scaffold412	WUBlastX	LTR_Ngaro	124922	125329	45	+	.	.
scaffold412	subtractBed	intrn	127544	127597	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	127544	127597	108	+	.	.
scaffold412	subtractBed	intrn	127727	127822	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	127727	127822	70	+	.	.
scaffold412	subtractBed	intrn	128156	128198	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	128156	128198	86	+	.	.
scaffold412	subtractBed	intrn	128252	128303	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	128252	128303	79	+	.	.
scaffold412	subtractBed	intrn	128369	128420	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	128369	128420	50	+	.	.
scaffold412	subtractBed	intrn	128524	128562	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	128524	128562	60	+	.	.
scaffold412	subtractBed	intrn	132486	132527	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	132486	132527	84	+	.	.
scaffold412	subtractBed	intrn	132897	132934	.	-	.	Parent=CGI_10018559;
	scaffold412	TRF	Tandem_Repeat	132897	132934	67	+	.	.
scaffold412	subtractBed	intrn	143736	144794	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1	143736	144794	423	+	.	.
scaffold412	subtractBed	intrn	144786	145418	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	144786	145418	191	+	.	.
scaffold412	subtractBed	intrn	145355	147283	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	145355	147283	650	+	.	.
scaffold412	subtractBed	intrn	146273	147334	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	146273	147334	661	+	.	.
scaffold412	subtractBed	intrn	148096	148245	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1	148096	148245	44	+	.	.
scaffold412	subtractBed	intrn	148033	148224	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1	148033	148224	43	+	.	.
scaffold412	subtractBed	intrn	148042	148443	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	148042	148443	29	+	.	.
scaffold412	subtractBed	intrn	147693	148022	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	147693	148022	72	+	.	.
scaffold412	subtractBed	intrn	147285	147680	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	147285	147680	120	+	.	.
scaffold412	subtractBed	intrn	147285	147956	.	-	.	Parent=CGI_10018560;
	scaffold412	WUBlastX	LINE_L1-Tx1	147285	147956	74	+	.	.
scaffold412	subtractBed	intrn	156425	156475	.	-	.	Parent=CGI_10018560;
	scaffold412	TRF	Tandem_Repeat	156425	156475	79	+	.	.
scaffold412	subtractBed	intrn	208032	208096	.	-	.	Parent=CGI_10018563;
	scaffold412	TRF	Tandem_Repeat	208032	208096	121	+	.	.
scaffold412	subtractBed	intrn	239316	239359	.	-	.	Parent=CGI_10018566;
	scaffold412	TRF	Tandem_Repeat	239316	239359	52	+	.	.
scaffold412	subtractBed	intrn	249041	249081	.	+	.	Parent=CGI_10018568;
	scaffold412	TRF	Tandem_Repeat	249041	249081	82	+	.	.
scaffold412	subtractBed	intrn	270643	270683	.	+	.	Parent=CGI_10018571;
	scaffold412	TRF	Tandem_Repeat	270643	270683	57	+	.	.
scaffold412	subtractBed	intrn	273296	273335	.	+	.	Parent=CGI_10018571;
	scaffold412	TRF	Tandem_Repeat	273296	273335	80	+	.	.
scaffold412	subtractBed	intrn	339626	339669	.	+	.	Parent=CGI_10018574;
	scaffold412	TRF	Tandem_Repeat	339626	339669	79	+	.	.
scaffold412	subtractBed	intrn	477191	477412	.	-	.	Parent=CGI_10018583;
	scaffold412	WUBlastX	LTR_Gypsy	477191	477412	54	-	.	.
scaffold412	subtractBed	intrn	548748	548793	.	+	.	Parent=CGI_10018587;
	scaffold412	TRF	Tandem_Repeat	548748	548793	92	+	.	.
scaffold41206	subtractBed	intrn	96001	96773	.	-	.	Parent=CGI_10004793;
	scaffold41206	TRF	Tandem_Repeat	96001	96773	1189	+	.	.
scaffold41206	subtractBed	intrn	92089	92313	.	-	.	Parent=CGI_10004793;
	scaffold41206	WUBlastX	DNA_hAT-Blackja	92089	92313	50	-	.	.
scaffold41210	subtractBed	intrn	7413	7516	.	+	.	Parent=CGI_10004798;
	scaffold41210	TRF	Tandem_Repeat	7413	7516	190	+	.	.
scaffold41210	subtractBed	intrn	4960	5112	.	+	.	Parent=CGI_10004798;
	scaffold41210	WUBlastX	LINE_RTE-X	4960	5112	31	-	.	.
scaffold41210	subtractBed	intrn	10854	10885	.	+	.	Parent=CGI_10004798;
	scaffold41210	TRF	Tandem_Repeat	10854	10885	55	+	.	.
scaffold41210	subtractBed	intrn	70884	70924	.	-	.	Parent=CGI_10004803;
	scaffold41210	TRF	Tandem_Repeat	70884	70924	82	+	.	.
scaffold41212	subtractBed	intrn	76465	76546	.	+	.	Parent=CGI_10004813;
	scaffold41212	TRF	Tandem_Repeat	76465	76546	78	+	.	.
scaffold41214	subtractBed	intrn	110152	110184	.	+	.	Parent=CGI_10004810;
	scaffold41214	TRF	Tandem_Repeat	110152	110184	66	+	.	.
scaffold41220	subtractBed	intrn	10658	10714	.	+	.	Parent=CGI_10004850;
	scaffold41220	TRF	Tandem_Repeat	10658	10714	114	+	.	.
scaffold41220	subtractBed	intrn	22658	22718	.	-	.	Parent=CGI_10004851;
	scaffold41220	TRF	Tandem_Repeat	22658	22718	113	+	.	.
scaffold41220	subtractBed	intrn	31856	31927	.	+	.	Parent=CGI_10004853;
	scaffold41220	TRF	Tandem_Repeat	31856	31927	144	+	.	.
scaffold41220	subtractBed	intrn	43817	43986	.	+	.	Parent=CGI_10004853;
	scaffold41220	TRF	Tandem_Repeat	43817	43986	88	+	.	.
scaffold41220	subtractBed	intrn	43640	43986	.	+	.	Parent=CGI_10004853;
	scaffold41220	TRF	Tandem_Repeat	43640	43986	419	+	.	.
scaffold41220	subtractBed	intrn	43640	44027	.	+	.	Parent=CGI_10004853;
	scaffold41220	TRF	Tandem_Repeat	43640	44027	467	+	.	.
scaffold41220	subtractBed	intrn	43817	43986	.	-	.	Parent=CGI_10004854;
	scaffold41220	TRF	Tandem_Repeat	43817	43986	88	+	.	.
scaffold41220	subtractBed	intrn	43640	43986	.	-	.	Parent=CGI_10004854;
	scaffold41220	TRF	Tandem_Repeat	43640	43986	419	+	.	.
scaffold41220	subtractBed	intrn	43640	44027	.	-	.	Parent=CGI_10004854;
	scaffold41220	TRF	Tandem_Repeat	43640	44027	467	+	.	.
scaffold41220	subtractBed	intrn	71361	71672	.	-	.	Parent=CGI_10004855;
	scaffold41220	WUBlastX	LINE_L2	71361	71672	40	-	.	.
scaffold41220	subtractBed	intrn	91090	91832	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	91090	91832	625	+	.	.
scaffold41220	subtractBed	intrn	91090	91832	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	91090	91832	788	+	.	.
scaffold41220	subtractBed	intrn	93299	93349	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	93299	93349	93	+	.	.
scaffold41220	subtractBed	intrn	98992	100128	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	98992	100128	1530	+	.	.
scaffold41220	subtractBed	intrn	104571	104624	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	104571	104624	90	+	.	.
scaffold41220	subtractBed	intrn	104571	104625	.	+	.	Parent=CGI_10004858;
	scaffold41220	TRF	Tandem_Repeat	104571	104625	74	+	.	.
scaffold41220	subtractBed	intrn	98992	100128	.	-	.	Parent=CGI_10004860;
	scaffold41220	TRF	Tandem_Repeat	98992	100128	1530	+	.	.
scaffold41220	subtractBed	intrn	104571	104624	.	-	.	Parent=CGI_10004860;
	scaffold41220	TRF	Tandem_Repeat	104571	104624	90	+	.	.
scaffold41220	subtractBed	intrn	104571	104625	.	-	.	Parent=CGI_10004860;
	scaffold41220	TRF	Tandem_Repeat	104571	104625	74	+	.	.
scaffold41228	subtractBed	intrn	16862	18052	.	-	.	Parent=CGI_10004861;
	scaffold41228	WUBlastX	LINE_L1-Tx1	16862	18052	533	+	.	.
scaffold41228	subtractBed	intrn	17788	18456	.	-	.	Parent=CGI_10004861;
	scaffold41228	WUBlastX	LINE_L1-Tx1	17788	18456	303	+	.	.
scaffold41228	subtractBed	intrn	15957	16511	.	-	.	Parent=CGI_10004861;
	scaffold41228	WUBlastX	LINE_L2	15957	16511	135	+	.	.
scaffold41228	subtractBed	intrn	15885	16544	.	-	.	Parent=CGI_10004861;
	scaffold41228	WUBlastX	LINE_L2	15885	16544	76	+	.	.
scaffold41228	subtractBed	intrn	60477	60693	.	+	.	Parent=CGI_10004863;
	scaffold41228	TRF	Tandem_Repeat	60477	60693	185	+	.	.
scaffold41242	subtractBed	intrn	59862	60869	.	+	.	Parent=CGI_10004884;
	scaffold41242	TRF	Tandem_Repeat	59862	60869	1558	+	.	.
scaffold41242	subtractBed	intrn	61637	61664	.	+	.	Parent=CGI_10004884;
	scaffold41242	TRF	Tandem_Repeat	61637	61664	56	+	.	.
scaffold41242	subtractBed	intrn	83916	83964	.	+	.	Parent=CGI_10004887;
	scaffold41242	TRF	Tandem_Repeat	83916	83964	89	+	.	.
scaffold41242	subtractBed	intrn	85796	85874	.	+	.	Parent=CGI_10004887;
	scaffold41242	TRF	Tandem_Repeat	85796	85874	158	+	.	.
scaffold41242	subtractBed	intrn	101123	101347	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	101123	101347	114	+	.	.
scaffold41242	subtractBed	intrn	100543	100953	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1	100543	100953	28	+	.	.
scaffold41242	subtractBed	intrn	100477	100746	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1	100477	100746	69	+	.	.
scaffold41242	subtractBed	intrn	100537	100785	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	100537	100785	104	+	.	.
scaffold41242	subtractBed	intrn	101942	102304	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	101942	102304	21	+	.	.
scaffold41242	subtractBed	intrn	100322	100459	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1	100322	100459	77	+	.	.
scaffold41242	subtractBed	intrn	101063	101347	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1	101063	101347	69	+	.	.
scaffold41242	subtractBed	intrn	99895	100080	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	99895	100080	72	+	.	.
scaffold41242	subtractBed	intrn	100129	100794	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	100129	100794	38	+	.	.
scaffold41242	subtractBed	intrn	101117	101392	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	101117	101392	107	+	.	.
scaffold41242	subtractBed	intrn	99802	100092	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	99802	100092	40	+	.	.
scaffold41242	subtractBed	intrn	101942	102118	.	-	.	Parent=CGI_10004889;
	scaffold41242	WUBlastX	LINE_L1-Tx1	101942	102118	53	+	.	.
scaffold41296	subtractBed	intrn	9930	9974	.	-	.	Parent=CGI_10004838;
	scaffold41296	TRF	Tandem_Repeat	9930	9974	90	+	.	.
scaffold41296	subtractBed	intrn	10439	10469	.	-	.	Parent=CGI_10004838;
	scaffold41296	TRF	Tandem_Repeat	10439	10469	53	+	.	.
scaffold41296	subtractBed	intrn	12229	12976	.	-	.	Parent=CGI_10004838;
	scaffold41296	TRF	Tandem_Repeat	12229	12976	1088	+	.	.
scaffold41296	subtractBed	intrn	64666	64821	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	64666	64821	163	+	.	.
scaffold41296	subtractBed	intrn	67044	67628	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	67044	67628	699	+	.	.
scaffold41296	subtractBed	intrn	67051	67628	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	67051	67628	674	+	.	.
scaffold41296	subtractBed	intrn	74173	75108	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	74173	75120	1441	+	.	.
scaffold41296	subtractBed	intrn	88321	88387	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	88321	88387	134	+	.	.
scaffold41296	subtractBed	intrn	97281	97529	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	97281	97529	331	+	.	.
scaffold41296	subtractBed	intrn	97281	97529	.	-	.	Parent=CGI_10004841;
	scaffold41296	TRF	Tandem_Repeat	97281	97529	367	+	.	.
scaffold413	subtractBed	intrn	10697	10782	.	-	.	Parent=CGI_10022791;
	scaffold413	WUBlastX	LINE_L1	10697	10900	22	-	.	.
scaffold413	subtractBed	intrn	10042	10311	.	-	.	Parent=CGI_10022791;
	scaffold413	WUBlastX	LINE_L1-Tx1	10042	10311	22	-	.	.
scaffold413	subtractBed	intrn	10977	11804	.	-	.	Parent=CGI_10022791;
	scaffold413	WUBlastX	LINE_L1	10977	11804	190	-	.	.
scaffold413	subtractBed	intrn	11824	12150	.	-	.	Parent=CGI_10022791;
	scaffold413	WUBlastX	LINE_L1-Tx1	11824	12150	40	-	.	.
scaffold413	subtractBed	intrn	11815	12069	.	-	.	Parent=CGI_10022791;
	scaffold413	WUBlastX	LINE_L1-Tx1	11815	12069	120	-	.	.
scaffold413	subtractBed	intrn	15197	15388	.	-	.	Parent=CGI_10022791;
	scaffold413	TRF	Tandem_Repeat	15197	15388	119	+	.	.
scaffold413	subtractBed	intrn	15725	15972	.	-	.	Parent=CGI_10022791;
	scaffold413	TRF	Tandem_Repeat	15725	16007	478	+	.	.
scaffold413	subtractBed	intrn	16784	17403	.	-	.	Parent=CGI_10022791;
	scaffold413	TRF	Tandem_Repeat	16784	17403	965	+	.	.
scaffold413	subtractBed	intrn	16715	17399	.	-	.	Parent=CGI_10022791;
	scaffold413	TRF	Tandem_Repeat	16715	17399	1020	+	.	.
scaffold413	subtractBed	intrn	20032	20221	.	-	.	Parent=CGI_10022792;
	scaffold413	TRF	Tandem_Repeat	20032	20221	184	+	.	.
scaffold413	subtractBed	intrn	21679	21885	.	-	.	Parent=CGI_10022792;
	scaffold413	TRF	Tandem_Repeat	21679	21885	360	+	.	.
scaffold413	subtractBed	intrn	24998	25198	.	-	.	Parent=CGI_10022792;
	scaffold413	TRF	Tandem_Repeat	24998	25198	267	+	.	.
scaffold413	subtractBed	intrn	24985	25198	.	-	.	Parent=CGI_10022792;
	scaffold413	TRF	Tandem_Repeat	24985	25198	290	+	.	.
scaffold413	subtractBed	intrn	31697	31915	.	-	.	Parent=CGI_10022792;
	scaffold413	TRF	Tandem_Repeat	31697	31915	251	+	.	.
scaffold413	subtractBed	intrn	77703	77736	.	+	.	Parent=CGI_10022793;
	scaffold413	TRF	Tandem_Repeat	77703	77736	68	+	.	.
scaffold413	subtractBed	intrn	138702	138782	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	138702	138782	162	+	.	.
scaffold413	subtractBed	intrn	138885	138940	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	138885	138940	94	+	.	.
scaffold413	subtractBed	intrn	144660	144982	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	144660	144982	170	+	.	.
scaffold413	subtractBed	intrn	144742	144988	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	144742	144988	458	+	.	.
scaffold413	subtractBed	intrn	143385	143561	.	+	.	Parent=CGI_10022796;
	scaffold413	WUBlastX	LTR_Ngaro	143385	143561	106	-	.	.
scaffold413	subtractBed	intrn	143638	144108	.	+	.	Parent=CGI_10022796;
	scaffold413	WUBlastX	LTR_Ngaro	143638	144108	128	-	.	.
scaffold413	subtractBed	intrn	143602	143979	.	+	.	Parent=CGI_10022796;
	scaffold413	WUBlastX	LTR_Ngaro	143602	143979	142	-	.	.
scaffold413	subtractBed	intrn	152011	152041	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	152011	152041	62	+	.	.
scaffold413	subtractBed	intrn	153576	153619	.	+	.	Parent=CGI_10022796;
	scaffold413	TRF	Tandem_Repeat	153576	153619	88	+	.	.
scaffold413	subtractBed	intrn	205901	205939	.	-	.	Parent=CGI_10022798;
	scaffold413	TRF	Tandem_Repeat	205901	205939	60	+	.	.
scaffold413	subtractBed	intrn	284293	285383	.	-	.	Parent=CGI_10022800;
	scaffold413	TRF	Tandem_Repeat	284293	285383	1761	+	.	.
scaffold413	subtractBed	intrn	291635	291661	.	-	.	Parent=CGI_10022800;
	scaffold413	TRF	Tandem_Repeat	291635	291661	54	+	.	.
scaffold413	subtractBed	intrn	291661	291692	.	-	.	Parent=CGI_10022800;
	scaffold413	TRF	Tandem_Repeat	291661	291692	64	+	.	.
scaffold413	subtractBed	intrn	436783	436877	.	-	.	Parent=CGI_10022803;
	scaffold413	TRF	Tandem_Repeat	436783	436877	120	+	.	.
scaffold413	subtractBed	intrn	437685	437772	.	-	.	Parent=CGI_10022803;
	scaffold413	TRF	Tandem_Repeat	437685	437772	117	+	.	.
scaffold413	subtractBed	intrn	443377	443411	.	-	.	Parent=CGI_10022803;
	scaffold413	TRF	Tandem_Repeat	443377	443411	70	+	.	.
scaffold413	subtractBed	intrn	452751	452814	.	-	.	Parent=CGI_10022803;
	scaffold413	TRF	Tandem_Repeat	452751	452814	128	+	.	.
scaffold413	subtractBed	intrn	470889	470997	.	-	.	Parent=CGI_10022804;
	scaffold413	TRF	Tandem_Repeat	470889	471009	128	+	.	.
scaffold413	subtractBed	intrn	489245	489345	.	-	.	Parent=CGI_10022805;
	scaffold413	WUBlastX	DNA_MuDR	489232	489345	31	-	.	.
scaffold413	subtractBed	intrn	489861	490002	.	-	.	Parent=CGI_10022805;
	scaffold413	WUBlastX	DNA_MuDR	489637	490002	97	-	.	.
scaffold413	subtractBed	intrn	493483	493566	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	493483	493566	123	+	.	.
scaffold413	subtractBed	intrn	497005	497168	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	497005	497168	73	+	.	.
scaffold413	subtractBed	intrn	497091	497185	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	497091	497185	140	+	.	.
scaffold413	subtractBed	intrn	499145	499274	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	499145	499274	217	+	.	.
scaffold413	subtractBed	intrn	499299	499876	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	499299	499876	511	+	.	.
scaffold413	subtractBed	intrn	500593	500853	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	500593	500853	280	+	.	.
scaffold413	subtractBed	intrn	504895	505802	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	504895	505802	1160	+	.	.
scaffold413	subtractBed	intrn	505180	505270	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	505180	505270	56	+	.	.
scaffold413	subtractBed	intrn	510842	511085	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	510842	511085	159	+	.	.
scaffold413	subtractBed	intrn	511121	511239	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	511121	511239	120	+	.	.
scaffold413	subtractBed	intrn	511124	511257	.	+	.	Parent=CGI_10022806;
	scaffold413	TRF	Tandem_Repeat	511124	511257	87	+	.	.
scaffold413	subtractBed	intrn	533656	534139	.	-	.	Parent=CGI_10022809;
	scaffold413	TRF	Tandem_Repeat	533656	534139	277	+	.	.
scaffold413	subtractBed	intrn	554487	555197	.	+	.	Parent=CGI_10022810;
	scaffold413	WUBlastX	LTR_Gypsy	554487	555197	84	+	.	.
scaffold413	subtractBed	intrn	563736	563967	.	-	.	Parent=CGI_10022811;
	scaffold413	TRF	Tandem_Repeat	563736	563967	112	+	.	.
scaffold413	subtractBed	intrn	576047	576080	.	-	.	Parent=CGI_10022813;
	scaffold413	TRF	Tandem_Repeat	576047	576080	68	+	.	.
scaffold413	subtractBed	intrn	604206	604346	.	-	.	Parent=CGI_10022818;
	scaffold413	TRF	Tandem_Repeat	604206	604346	219	+	.	.
scaffold413	subtractBed	intrn	604201	604386	.	-	.	Parent=CGI_10022818;
	scaffold413	TRF	Tandem_Repeat	604201	604386	165	+	.	.
scaffold413	subtractBed	intrn	613869	613869	.	-	.	Parent=CGI_10022819;
	scaffold413	WUBlastX	LTR_Pao	613869	614033	146	+	.	.
scaffold413	subtractBed	intrn	613869	613869	.	+	.	Parent=CGI_10022820;
	scaffold413	WUBlastX	LTR_Pao	613869	614033	146	+	.	.
scaffold413	subtractBed	intrn	626820	626849	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	626820	626849	60	+	.	.
scaffold413	subtractBed	intrn	632733	632770	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	632733	632770	76	+	.	.
scaffold413	subtractBed	intrn	634944	635014	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	634944	635014	69	+	.	.
scaffold413	subtractBed	intrn	634988	635282	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	634988	635282	527	+	.	.
scaffold413	subtractBed	intrn	635257	635329	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	635257	635329	53	+	.	.
scaffold413	subtractBed	intrn	635275	635350	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	635275	635350	52	+	.	.
scaffold413	subtractBed	intrn	640776	640809	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	640776	640809	50	+	.	.
scaffold413	subtractBed	intrn	651485	651525	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	651485	651525	82	+	.	.
scaffold413	subtractBed	intrn	654939	654982	.	-	.	Parent=CGI_10022821;
	scaffold413	TRF	Tandem_Repeat	654939	654982	54	+	.	.
scaffold413	subtractBed	intrn	733662	734985	.	-	.	Parent=CGI_10022826;
	scaffold413	TRF	Tandem_Repeat	733662	734985	1139	+	.	.
scaffold413	subtractBed	intrn	733700	733964	.	-	.	Parent=CGI_10022826;
	scaffold413	TRF	Tandem_Repeat	733700	733964	140	+	.	.
scaffold413	subtractBed	intrn	733720	733844	.	-	.	Parent=CGI_10022826;
	scaffold413	TRF	Tandem_Repeat	733720	733844	138	+	.	.
scaffold413	subtractBed	intrn	735698	736549	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_L2	735698	736549	31	+	.	.
scaffold413	subtractBed	intrn	736542	736811	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_CR1-L2	736542	736811	183	+	.	.
scaffold413	subtractBed	intrn	736088	737068	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_CR1-L2	736088	737068	109	+	.	.
scaffold413	subtractBed	intrn	736088	736555	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_CR1-L2	736088	736555	186	+	.	.
scaffold413	subtractBed	intrn	736004	736555	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_CR1-L2	736004	736555	173	+	.	.
scaffold413	subtractBed	intrn	737068	737349	.	-	.	Parent=CGI_10022826;
	scaffold413	WUBlastX	LINE_L2	737068	737349	101	+	.	.
scaffold41312	subtractBed	intrn	9842	9940	.	+	.	Parent=CGI_10004986;
	scaffold41312	TRF	Tandem_Repeat	9842	9940	173	+	.	.
scaffold41312	subtractBed	intrn	9940	10079	.	+	.	Parent=CGI_10004986;
	scaffold41312	TRF	Tandem_Repeat	9940	10079	59	+	.	.
scaffold41312	subtractBed	intrn	10542	10659	.	+	.	Parent=CGI_10004986;
	scaffold41312	TRF	Tandem_Repeat	10542	10659	69	+	.	.
scaffold41312	subtractBed	intrn	102794	102828	.	+	.	Parent=CGI_10004988;
	scaffold41312	TRF	Tandem_Repeat	102794	102828	70	+	.	.
scaffold41312	subtractBed	intrn	107530	107572	.	+	.	Parent=CGI_10004988;
	scaffold41312	TRF	Tandem_Repeat	107530	107572	86	+	.	.
scaffold41316	subtractBed	intrn	2091	2388	.	-	.	Parent=CGI_10004931;
	scaffold41316	TRF	Tandem_Repeat	2091	2418	474	+	.	.
scaffold41316	subtractBed	intrn	23628	23747	.	+	.	Parent=CGI_10004932;
	scaffold41316	TRF	Tandem_Repeat	23628	23747	222	+	.	.
scaffold41316	subtractBed	intrn	44779	44861	.	-	.	Parent=CGI_10004933;
	scaffold41316	TRF	Tandem_Repeat	44779	44861	166	+	.	.
scaffold41316	subtractBed	intrn	47957	48022	.	-	.	Parent=CGI_10004933;
	scaffold41316	TRF	Tandem_Repeat	47957	48022	123	+	.	.
scaffold41318	subtractBed	intrn	63339	63395	.	-	.	Parent=CGI_10004985;
	scaffold41318	TRF	Tandem_Repeat	63339	63395	114	+	.	.
scaffold41318	subtractBed	intrn	69704	69892	.	-	.	Parent=CGI_10004985;
	scaffold41318	TRF	Tandem_Repeat	69704	69892	200	+	.	.
scaffold41318	subtractBed	intrn	69774	69891	.	-	.	Parent=CGI_10004985;
	scaffold41318	TRF	Tandem_Repeat	69774	69891	130	+	.	.
scaffold41318	subtractBed	intrn	71445	71592	.	-	.	Parent=CGI_10004985;
	scaffold41318	TRF	Tandem_Repeat	71445	71592	143	+	.	.
scaffold41318	subtractBed	intrn	74158	74188	.	-	.	Parent=CGI_10004985;
	scaffold41318	TRF	Tandem_Repeat	74158	74188	53	+	.	.
scaffold41344	subtractBed	intrn	45235	45308	.	-	.	Parent=CGI_10004979;
	scaffold41344	TRF	Tandem_Repeat	45235	45308	112	+	.	.
scaffold41344	subtractBed	intrn	56781	56836	.	+	.	Parent=CGI_10004980;
	scaffold41344	TRF	Tandem_Repeat	56781	56836	112	+	.	.
scaffold41344	subtractBed	intrn	56906	56934	.	+	.	Parent=CGI_10004980;
	scaffold41344	TRF	Tandem_Repeat	56906	56934	58	+	.	.
scaffold41344	subtractBed	intrn	59666	59699	.	+	.	Parent=CGI_10004980;
	scaffold41344	TRF	Tandem_Repeat	59666	59699	50	+	.	.
scaffold41344	subtractBed	intrn	73369	73454	.	+	.	Parent=CGI_10004980;
	scaffold41344	WUBlastX	LINE_RTE-X	73369	73629	52	+	.	.
scaffold41344	subtractBed	intrn	103981	104341	.	-	.	Parent=CGI_10004982;
	scaffold41344	TRF	Tandem_Repeat	103981	104341	596	+	.	.
scaffold41344	subtractBed	intrn	112551	112598	.	+	.	Parent=CGI_10004984;
	scaffold41344	TRF	Tandem_Repeat	112551	112598	78	+	.	.
scaffold41344	subtractBed	intrn	113088	113531	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	113088	113531	219	-	.	.
scaffold41344	subtractBed	intrn	113169	113597	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	113169	113597	83	-	.	.
scaffold41344	subtractBed	intrn	114500	114604	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	114500	114604	22	-	.	.
scaffold41344	subtractBed	intrn	113010	113501	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	113010	113501	111	-	.	.
scaffold41344	subtractBed	intrn	112896	113477	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	112896	113477	92	-	.	.
scaffold41344	subtractBed	intrn	113094	113459	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	113094	113459	246	-	.	.
scaffold41344	subtractBed	intrn	112848	113084	.	+	.	Parent=CGI_10004984;
	scaffold41344	WUBlastX	LINE_L2	112848	113084	56	-	.	.
scaffold41346	subtractBed	intrn	17676	18080	.	+	.	Parent=CGI_10004998;
	scaffold41346	WUBlastX	DNA_TcMar-Marin	17676	18080	234	-	.	.
scaffold41346	subtractBed	intrn	18266	18883	.	+	.	Parent=CGI_10004998;
	scaffold41346	WUBlastX	DNA_TcMar-Marin	18266	18883	63	-	.	.
scaffold41346	subtractBed	intrn	18260	18784	.	+	.	Parent=CGI_10004998;
	scaffold41346	WUBlastX	DNA_TcMar-Marin	18260	18784	320	-	.	.
scaffold41346	subtractBed	intrn	17688	18167	.	+	.	Parent=CGI_10004998;
	scaffold41346	WUBlastX	DNA_TcMar-Marin	17688	18167	133	-	.	.
scaffold41346	subtractBed	intrn	33674	33805	.	-	.	Parent=CGI_10004999;
	scaffold41346	WUBlastX	RC_Helitron	33674	33805	51	-	.	.
scaffold41346	subtractBed	intrn	33266	33763	.	-	.	Parent=CGI_10004999;
	scaffold41346	WUBlastX	RC_Helitron	33266	33763	75	-	.	.
scaffold41346	subtractBed	intrn	33362	33574	.	-	.	Parent=CGI_10004999;
	scaffold41346	WUBlastX	DNA_Helitron	33362	33574	90	-	.	.
scaffold41346	subtractBed	intrn	33407	33772	.	-	.	Parent=CGI_10004999;
	scaffold41346	WUBlastX	RC_Helitron	33407	33772	89	-	.	.
scaffold41346	subtractBed	intrn	36887	36922	.	-	.	Parent=CGI_10004999;
	scaffold41346	TRF	Tandem_Repeat	36887	36922	72	+	.	.
scaffold41346	subtractBed	intrn	112643	112678	.	+	.	Parent=CGI_10005002;
	scaffold41346	TRF	Tandem_Repeat	112643	112678	72	+	.	.
scaffold41356	subtractBed	intrn	9479	9523	.	-	.	Parent=CGI_10004993;
	scaffold41356	TRF	Tandem_Repeat	9479	9523	90	+	.	.
scaffold41356	subtractBed	intrn	12694	13281	.	-	.	Parent=CGI_10004993;
	scaffold41356	WUBlastX	LTR_Ngaro	12694	13281	110	-	.	.
scaffold41356	subtractBed	intrn	12470	12760	.	-	.	Parent=CGI_10004993;
	scaffold41356	WUBlastX	LTR_Ngaro	12470	12760	110	-	.	.
scaffold41356	subtractBed	intrn	12733	13194	.	-	.	Parent=CGI_10004993;
	scaffold41356	WUBlastX	LTR_Ngaro	12733	13194	113	-	.	.
scaffold41356	subtractBed	intrn	34300	34341	.	-	.	Parent=CGI_10004994;
	scaffold41356	TRF	Tandem_Repeat	34300	34341	84	+	.	.
scaffold41356	subtractBed	intrn	41778	41822	.	-	.	Parent=CGI_10004994;
	scaffold41356	TRF	Tandem_Repeat	41778	41822	90	+	.	.
scaffold41356	subtractBed	intrn	45552	45589	.	-	.	Parent=CGI_10004994;
	scaffold41356	TRF	Tandem_Repeat	45552	45589	76	+	.	.
scaffold41356	subtractBed	intrn	52676	52709	.	-	.	Parent=CGI_10004994;
	scaffold41356	TRF	Tandem_Repeat	52676	52709	52	+	.	.
scaffold41356	subtractBed	intrn	52399	52611	.	-	.	Parent=CGI_10004994;
	scaffold41356	WUBlastX	LINE_RTE-X	52399	52611	46	-	.	.
scaffold41356	subtractBed	intrn	52369	52623	.	-	.	Parent=CGI_10004994;
	scaffold41356	WUBlastX	LINE_RTE-X	52369	52623	41	-	.	.
scaffold41356	subtractBed	intrn	52676	52709	.	+	.	Parent=CGI_10004995;
	scaffold41356	TRF	Tandem_Repeat	52676	52709	52	+	.	.
scaffold41356	subtractBed	intrn	52399	52611	.	+	.	Parent=CGI_10004995;
	scaffold41356	WUBlastX	LINE_RTE-X	52399	52611	46	-	.	.
scaffold41356	subtractBed	intrn	52369	52623	.	+	.	Parent=CGI_10004995;
	scaffold41356	WUBlastX	LINE_RTE-X	52369	52623	41	-	.	.
scaffold41356	subtractBed	intrn	58018	58242	.	+	.	Parent=CGI_10004995;
	scaffold41356	WUBlastX	LINE_RTE-X	58018	58242	32	-	.	.
scaffold41356	subtractBed	intrn	57789	57959	.	+	.	Parent=CGI_10004995;
	scaffold41356	WUBlastX	LINE_RTE-X	57789	57959	55	-	.	.
scaffold41356	subtractBed	intrn	57804	58178	.	+	.	Parent=CGI_10004995;
	scaffold41356	WUBlastX	LINE_RTE-X	57804	58178	44	-	.	.
scaffold41356	subtractBed	intrn	59514	59541	.	+	.	Parent=CGI_10004995;
	scaffold41356	TRF	Tandem_Repeat	59514	59541	56	+	.	.
scaffold41356	subtractBed	intrn	94500	94709	.	+	.	Parent=CGI_10004996;
	scaffold41356	TRF	Tandem_Repeat	94500	94709	190	+	.	.
scaffold41356	subtractBed	intrn	94450	94707	.	+	.	Parent=CGI_10004996;
	scaffold41356	TRF	Tandem_Repeat	94450	94707	194	+	.	.
scaffold41356	subtractBed	intrn	100050	100089	.	+	.	Parent=CGI_10004996;
	scaffold41356	TRF	Tandem_Repeat	100050	100089	80	+	.	.
scaffold41356	subtractBed	intrn	109657	109813	.	+	.	Parent=CGI_10004997;
	scaffold41356	TRF	Tandem_Repeat	109657	109813	170	+	.	.
scaffold41356	subtractBed	intrn	111719	111912	.	+	.	Parent=CGI_10004997;
	scaffold41356	TRF	Tandem_Repeat	111719	111912	205	+	.	.
scaffold41358	subtractBed	intrn	36080	36129	.	+	.	Parent=CGI_10004969;
	scaffold41358	TRF	Tandem_Repeat	36080	36129	66	+	.	.
scaffold41358	subtractBed	intrn	65580	65627	.	+	.	Parent=CGI_10004973;
	scaffold41358	TRF	Tandem_Repeat	65580	65627	96	+	.	.
scaffold41358	subtractBed	intrn	79183	79262	.	-	.	Parent=CGI_10004974;
	scaffold41358	TRF	Tandem_Repeat	79183	79262	160	+	.	.
scaffold41358	subtractBed	intrn	81292	81624	.	-	.	Parent=CGI_10004974;
	scaffold41358	TRF	Tandem_Repeat	81292	81624	531	+	.	.
scaffold41358	subtractBed	intrn	81343	81490	.	-	.	Parent=CGI_10004974;
	scaffold41358	TRF	Tandem_Repeat	81343	81490	68	+	.	.
scaffold41358	subtractBed	intrn	91950	92022	.	+	.	Parent=CGI_10004975;
	scaffold41358	TRF	Tandem_Repeat	91950	92022	146	+	.	.
scaffold41358	subtractBed	intrn	110356	110662	.	-	.	Parent=CGI_10004976;
	scaffold41358	TRF	Tandem_Repeat	110356	110662	200	+	.	.
scaffold41358	subtractBed	intrn	110388	110715	.	-	.	Parent=CGI_10004976;
	scaffold41358	TRF	Tandem_Repeat	110388	110715	426	+	.	.
scaffold41358	subtractBed	intrn	110356	110705	.	-	.	Parent=CGI_10004976;
	scaffold41358	TRF	Tandem_Repeat	110356	110705	556	+	.	.
scaffold41358	subtractBed	intrn	110896	111117	.	-	.	Parent=CGI_10004976;
	scaffold41358	WUBlastX	DNA_TcMar-Tc1	110896	111117	154	+	.	.
scaffold41358	subtractBed	intrn	110732	110905	.	-	.	Parent=CGI_10004976;
	scaffold41358	WUBlastX	DNA_TcMar-Tc1	110732	110905	31	+	.	.
scaffold41358	subtractBed	intrn	112017	112046	.	-	.	Parent=CGI_10004976;
	scaffold41358	WUBlastX	DNA_TcMar-Tc1	112017	112046	20	+	.	.
scaffold41358	subtractBed	intrn	111122	111208	.	-	.	Parent=CGI_10004976;
	scaffold41358	WUBlastX	DNA_TcMar-Tc1	111122	111208	36	+	.	.
scaffold41358	subtractBed	intrn	111140	111226	.	-	.	Parent=CGI_10004976;
	scaffold41358	WUBlastX	DNA_TcMar-Tc1	111140	111226	29	+	.	.
scaffold41372	subtractBed	intrn	70147	70245	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	70147	70245	36	-	.	.
scaffold41372	subtractBed	intrn	70626	71621	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	70626	71621	350	-	.	.
scaffold41372	subtractBed	intrn	72101	72505	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	72101	72505	296	-	.	.
scaffold41372	subtractBed	intrn	72508	72807	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	72508	72807	158	-	.	.
scaffold41372	subtractBed	intrn	73073	73813	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	73073	73813	279	-	.	.
scaffold41372	subtractBed	intrn	71936	72502	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1	71936	72502	97	-	.	.
scaffold41372	subtractBed	intrn	70710	71816	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	70710	71816	100	-	.	.
scaffold41372	subtractBed	intrn	73758	74123	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	73758	74123	135	-	.	.
scaffold41372	subtractBed	intrn	70120	70290	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	70120	70290	28	-	.	.
scaffold41372	subtractBed	intrn	72502	73113	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1	72502	73113	66	-	.	.
scaffold41372	subtractBed	intrn	69875	70150	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	69875	70150	20	-	.	.
scaffold41372	subtractBed	intrn	69953	70150	.	+	.	Parent=CGI_10005012;
	scaffold41372	WUBlastX	LINE_L1-Tx1	69953	70150	72	-	.	.
scaffold41380	subtractBed	intrn	65456	65510	.	+	.	Parent=CGI_10005041;
	scaffold41380	TRF	Tandem_Repeat	65456	65510	110	+	.	.
scaffold41380	subtractBed	intrn	65958	66206	.	+	.	Parent=CGI_10005041;
	scaffold41380	TRF	Tandem_Repeat	65958	66206	250	+	.	.
scaffold41380	subtractBed	intrn	67190	67609	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	67190	67609	32	-	.	.
scaffold41380	subtractBed	intrn	66648	66800	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	66648	66800	39	-	.	.
scaffold41380	subtractBed	intrn	66793	66834	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	66793	66834	20	-	.	.
scaffold41380	subtractBed	intrn	66840	67109	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	66840	67109	65	-	.	.
scaffold41380	subtractBed	intrn	67361	67609	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	67361	67609	93	-	.	.
scaffold41380	subtractBed	intrn	67289	67477	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	67289	67477	66	-	.	.
scaffold41380	subtractBed	intrn	66654	66746	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	66654	66746	41	-	.	.
scaffold41380	subtractBed	intrn	68021	68089	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	68021	68089	31	-	.	.
scaffold41380	subtractBed	intrn	66992	67252	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	66992	67252	29	-	.	.
scaffold41380	subtractBed	intrn	67373	67651	.	+	.	Parent=CGI_10005041;
	scaffold41380	WUBlastX	LINE_RTE-BovB	67373	67651	33	-	.	.
scaffold41380	subtractBed	intrn	82656	83019	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	82656	83019	532	+	.	.
scaffold41380	subtractBed	intrn	82984	83225	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	82984	83225	157	+	.	.
scaffold41380	subtractBed	intrn	89118	89260	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	89118	89260	254	+	.	.
scaffold41380	subtractBed	intrn	95036	95812	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	95036	95812	1108	+	.	.
scaffold41380	subtractBed	intrn	95843	95874	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	95843	95874	55	+	.	.
scaffold41380	subtractBed	intrn	101148	101750	.	-	.	Parent=CGI_10005042;
	scaffold41380	TRF	Tandem_Repeat	101148	101750	546	+	.	.
scaffold41388	subtractBed	intrn	55975	56430	.	-	.	Parent=CGI_10005014;
	scaffold41388	WUBlastX	LINE_L2	55975	56430	166	-	.	.
scaffold41388	subtractBed	intrn	59788	59820	.	-	.	Parent=CGI_10005014;
	scaffold41388	TRF	Tandem_Repeat	59788	59820	50	+	.	.
scaffold41388	subtractBed	intrn	112487	112620	.	-	.	Parent=CGI_10005016;
	scaffold41388	TRF	Tandem_Repeat	112487	112620	119	+	.	.
scaffold41388	subtractBed	intrn	113616	113732	.	-	.	Parent=CGI_10005016;
	scaffold41388	TRF	Tandem_Repeat	113616	113732	118	+	.	.
scaffold41390	subtractBed	intrn	29990	30027	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	29990	30027	76	+	.	.
scaffold41390	subtractBed	intrn	30811	31063	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	30806	31063	318	+	.	.
scaffold41390	subtractBed	intrn	33820	35229	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	33820	35229	2350	+	.	.
scaffold41390	subtractBed	intrn	36166	36321	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	36166	36321	167	+	.	.
scaffold41390	subtractBed	intrn	36767	36881	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	36767	36881	95	+	.	.
scaffold41390	subtractBed	intrn	36751	36954	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	36751	36954	345	+	.	.
scaffold41390	subtractBed	intrn	38459	39900	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	38459	39900	2670	+	.	.
scaffold41390	subtractBed	intrn	40724	40835	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	40724	40835	206	+	.	.
scaffold41390	subtractBed	intrn	41311	42025	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	41311	42025	1098	+	.	.
scaffold41390	subtractBed	intrn	41311	42025	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	41311	42025	1080	+	.	.
scaffold41390	subtractBed	intrn	41311	41668	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	41311	41668	617	+	.	.
scaffold41390	subtractBed	intrn	41668	42027	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	41668	42027	558	+	.	.
scaffold41390	subtractBed	intrn	42514	42739	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	42514	42739	223	+	.	.
scaffold41390	subtractBed	intrn	44218	44651	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44218	44651	174	+	.	.
scaffold41390	subtractBed	intrn	44511	44684	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44511	44684	160	+	.	.
scaffold41390	subtractBed	intrn	44637	45293	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44637	45293	609	+	.	.
scaffold41390	subtractBed	intrn	44984	45118	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44984	45118	198	+	.	.
scaffold41390	subtractBed	intrn	44985	45862	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44985	45862	666	+	.	.
scaffold41390	subtractBed	intrn	45272	45514	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	45272	45514	388	+	.	.
scaffold41390	subtractBed	intrn	44918	45862	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	44918	45862	621	+	.	.
scaffold41390	subtractBed	intrn	45624	45862	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	45624	45862	333	+	.	.
scaffold41390	subtractBed	intrn	46145	46373	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	46145	46373	261	+	.	.
scaffold41390	subtractBed	intrn	49590	50208	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	49590	50275	1103	+	.	.
scaffold41390	subtractBed	intrn	48878	49306	.	+	.	Parent=CGI_10004989;
	scaffold41390	TRF	Tandem_Repeat	48868	49306	583	+	.	.
scaffold41390	subtractBed	intrn	61147	61148	.	-	.	Parent=CGI_10004990;
	scaffold41390	WUBlastX	DNA_Kolobok-Hyd	61147	61356	26	-	.	.
scaffold41390	subtractBed	intrn	107980	108022	.	-	.	Parent=CGI_10004992;
	scaffold41390	TRF	Tandem_Repeat	107980	108022	86	+	.	.
scaffold41400	subtractBed	intrn	66188	66228	.	-	.	Parent=CGI_10005033;
	scaffold41400	TRF	Tandem_Repeat	66188	66228	57	+	.	.
scaffold41400	subtractBed	intrn	72628	73002	.	+	.	Parent=CGI_10005034;
	scaffold41400	WUBlastX	DNA_IS4EU	72628	73002	43	-	.	.
scaffold41400	subtractBed	intrn	77114	78123	.	+	.	Parent=CGI_10005034;
	scaffold41400	TRF	Tandem_Repeat	77114	78123	1201	+	.	.
scaffold41400	subtractBed	intrn	78853	78916	.	+	.	Parent=CGI_10005034;
	scaffold41400	TRF	Tandem_Repeat	78853	78916	55	+	.	.
scaffold41400	subtractBed	intrn	79094	79165	.	+	.	Parent=CGI_10005034;
	scaffold41400	TRF	Tandem_Repeat	79094	79165	53	+	.	.
scaffold41400	subtractBed	intrn	79179	79264	.	+	.	Parent=CGI_10005034;
	scaffold41400	TRF	Tandem_Repeat	79179	79264	54	+	.	.
scaffold41400	subtractBed	intrn	79883	79946	.	+	.	Parent=CGI_10005034;
	scaffold41400	TRF	Tandem_Repeat	79883	79946	119	+	.	.
scaffold41400	subtractBed	intrn	90839	90875	.	+	.	Parent=CGI_10005036;
	scaffold41400	TRF	Tandem_Repeat	90839	90875	74	+	.	.
scaffold41400	subtractBed	intrn	91769	91828	.	+	.	Parent=CGI_10005036;
	scaffold41400	TRF	Tandem_Repeat	91769	91828	120	+	.	.
scaffold41400	subtractBed	intrn	108708	108768	.	-	.	Parent=CGI_10005037;
	scaffold41400	TRF	Tandem_Repeat	108708	108768	66	+	.	.
scaffold41400	subtractBed	intrn	114637	114692	.	-	.	Parent=CGI_10005037;
	scaffold41400	TRF	Tandem_Repeat	114637	114692	58	+	.	.
scaffold41400	subtractBed	intrn	114640	114692	.	-	.	Parent=CGI_10005037;
	scaffold41400	TRF	Tandem_Repeat	114640	114692	88	+	.	.
scaffold41436	subtractBed	intrn	6286	6329	.	-	.	Parent=CGI_10005094;
	scaffold41436	TRF	Tandem_Repeat	6286	6329	88	+	.	.
scaffold41436	subtractBed	intrn	18804	18849	.	+	.	Parent=CGI_10005095;
	scaffold41436	TRF	Tandem_Repeat	18804	18849	92	+	.	.
scaffold41436	subtractBed	intrn	23406	23539	.	-	.	Parent=CGI_10005096;
	scaffold41436	TRF	Tandem_Repeat	23406	23539	213	+	.	.
scaffold41436	subtractBed	intrn	39239	39298	.	-	.	Parent=CGI_10005097;
	scaffold41436	TRF	Tandem_Repeat	39239	39298	120	+	.	.
scaffold41436	subtractBed	intrn	46125	46155	.	-	.	Parent=CGI_10005098;
	scaffold41436	TRF	Tandem_Repeat	46125	46155	62	+	.	.
scaffold41436	subtractBed	intrn	47190	47239	.	-	.	Parent=CGI_10005098;
	scaffold41436	TRF	Tandem_Repeat	47190	47239	100	+	.	.
scaffold41436	subtractBed	intrn	50017	50058	.	-	.	Parent=CGI_10005098;
	scaffold41436	TRF	Tandem_Repeat	50017	50058	66	+	.	.
scaffold41436	subtractBed	intrn	50071	50095	.	-	.	Parent=CGI_10005098;
	scaffold41436	TRF	Tandem_Repeat	50071	50095	50	+	.	.
scaffold41448	subtractBed	intrn	4371	5421	.	+	.	Parent=CGI_10005058;
	scaffold41448	TRF	Tandem_Repeat	4371	5421	863	+	.	.
scaffold41448	subtractBed	intrn	4387	5421	.	+	.	Parent=CGI_10005058;
	scaffold41448	TRF	Tandem_Repeat	4387	5421	1119	+	.	.
scaffold41448	subtractBed	intrn	4387	5421	.	+	.	Parent=CGI_10005058;
	scaffold41448	TRF	Tandem_Repeat	4387	5421	1140	+	.	.
scaffold41448	subtractBed	intrn	26583	27035	.	+	.	Parent=CGI_10005061;
	scaffold41448	WUBlastX	LINE_RTE-X	26583	27035	97	+	.	.
scaffold41448	subtractBed	intrn	36635	36667	.	-	.	Parent=CGI_10005062;
	scaffold41448	TRF	Tandem_Repeat	36635	36667	66	+	.	.
scaffold41448	subtractBed	intrn	37054	37285	.	-	.	Parent=CGI_10005062;
	scaffold41448	TRF	Tandem_Repeat	37054	37285	93	+	.	.
scaffold41448	subtractBed	intrn	37605	38126	.	-	.	Parent=CGI_10005062;
	scaffold41448	TRF	Tandem_Repeat	37605	38126	981	+	.	.
scaffold41448	subtractBed	intrn	43249	43285	.	-	.	Parent=CGI_10005062;
	scaffold41448	TRF	Tandem_Repeat	43249	43285	74	+	.	.
scaffold41448	subtractBed	intrn	95247	96106	.	+	.	Parent=CGI_10005063;
	scaffold41448	TRF	Tandem_Repeat	95247	96106	1357	+	.	.
scaffold41452	subtractBed	intrn	40699	40754	.	+	.	Parent=CGI_10005079;
	scaffold41452	TRF	Tandem_Repeat	40699	40754	67	+	.	.
scaffold41452	subtractBed	intrn	42875	42961	.	+	.	Parent=CGI_10005079;
	scaffold41452	TRF	Tandem_Repeat	42875	42961	68	+	.	.
scaffold41452	subtractBed	intrn	63164	63433	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	63164	63433	166	+	.	.
scaffold41452	subtractBed	intrn	63140	63463	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	63140	63463	140	+	.	.
scaffold41452	subtractBed	intrn	62547	63113	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	62547	63113	69	+	.	.
scaffold41452	subtractBed	intrn	62730	63119	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	62730	63119	191	+	.	.
scaffold41452	subtractBed	intrn	62494	62748	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	62494	62748	35	+	.	.
scaffold41452	subtractBed	intrn	62790	63128	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	62790	63128	215	+	.	.
scaffold41452	subtractBed	intrn	63164	63532	.	+	.	Parent=CGI_10005081;
	scaffold41452	WUBlastX	LINE_L2	63164	63532	41	+	.	.
scaffold41466	subtractBed	intrn	31439	31543	.	+	.	Parent=CGI_10005137;
	scaffold41466	WUBlastX	DNA_PiggyBac	31439	31543	21	-	.	.
scaffold41466	subtractBed	intrn	31611	31703	.	+	.	Parent=CGI_10005137;
	scaffold41466	WUBlastX	DNA_PiggyBac	31611	31703	47	-	.	.
scaffold41472	subtractBed	intrn	808	890	.	+	.	Parent=CGI_10005138;
	scaffold41472	TRF	Tandem_Repeat	808	890	67	+	.	.
scaffold41472	subtractBed	intrn	15509	15610	.	-	.	Parent=CGI_10005140;
	scaffold41472	TRF	Tandem_Repeat	15509	15610	75	+	.	.
scaffold41472	subtractBed	intrn	15525	15618	.	-	.	Parent=CGI_10005140;
	scaffold41472	TRF	Tandem_Repeat	15525	15618	127	+	.	.
scaffold41472	subtractBed	intrn	16091	16117	.	-	.	Parent=CGI_10005140;
	scaffold41472	TRF	Tandem_Repeat	16091	16117	54	+	.	.
scaffold41472	subtractBed	intrn	15041	15217	.	-	.	Parent=CGI_10005140;
	scaffold41472	WUBlastX	DNA_Harbinger	15041	15217	54	+	.	.
scaffold41472	subtractBed	intrn	14493	14918	.	-	.	Parent=CGI_10005140;
	scaffold41472	WUBlastX	DNA_Harbinger	14493	14918	24	+	.	.
scaffold41472	subtractBed	intrn	18367	18873	.	-	.	Parent=CGI_10005140;
	scaffold41472	WUBlastX	DNA_Harbinger	18367	18873	107	+	.	.
scaffold41472	subtractBed	intrn	18334	18795	.	-	.	Parent=CGI_10005140;
	scaffold41472	WUBlastX	DNA_Harbinger	18334	18795	204	+	.	.
scaffold41472	subtractBed	intrn	43237	43347	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	43237	43347	159	+	.	.
scaffold41472	subtractBed	intrn	44015	44949	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	44015	44949	1564	+	.	.
scaffold41472	subtractBed	intrn	45944	46892	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	45944	46892	1275	+	.	.
scaffold41472	subtractBed	intrn	46900	46960	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	46900	46960	86	+	.	.
scaffold41472	subtractBed	intrn	46897	46960	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	46897	46960	92	+	.	.
scaffold41472	subtractBed	intrn	59819	59863	.	-	.	Parent=CGI_10005142;
	scaffold41472	TRF	Tandem_Repeat	59819	59863	65	+	.	.
scaffold41472	subtractBed	intrn	59819	59863	.	+	.	Parent=CGI_10005143;
	scaffold41472	TRF	Tandem_Repeat	59819	59863	65	+	.	.
scaffold41472	subtractBed	intrn	71029	71158	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	71029	71158	90	+	.	.
scaffold41472	subtractBed	intrn	71029	71164	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	71029	71164	75	+	.	.
scaffold41472	subtractBed	intrn	71029	71157	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	71029	71157	108	+	.	.
scaffold41472	subtractBed	intrn	71719	71828	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	71719	71828	57	+	.	.
scaffold41472	subtractBed	intrn	84008	84047	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	84008	84047	80	+	.	.
scaffold41472	subtractBed	intrn	88040	88087	.	+	.	Parent=CGI_10005144;
	scaffold41472	TRF	Tandem_Repeat	88040	88087	96	+	.	.
scaffold41480	subtractBed	intrn	9951	10011	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	9951	10011	113	+	.	.
scaffold41480	subtractBed	intrn	10086	10130	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	10086	10130	90	+	.	.
scaffold41480	subtractBed	intrn	10195	10240	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	10195	10240	74	+	.	.
scaffold41480	subtractBed	intrn	10305	10344	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	10305	10344	80	+	.	.
scaffold41480	subtractBed	intrn	10852	10926	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	10852	10926	150	+	.	.
scaffold41480	subtractBed	intrn	11126	11247	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	11126	11247	169	+	.	.
scaffold41480	subtractBed	intrn	12002	12472	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	12002	12480	742	+	.	.
scaffold41480	subtractBed	intrn	13527	13783	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	13527	13796	452	+	.	.
scaffold41480	subtractBed	intrn	15308	15422	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	15308	15422	194	+	.	.
scaffold41480	subtractBed	intrn	16469	16722	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	16464	16722	157	+	.	.
scaffold41480	subtractBed	intrn	16608	16666	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	16608	16666	52	+	.	.
scaffold41480	subtractBed	intrn	17419	17599	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	17419	17599	127	+	.	.
scaffold41480	subtractBed	intrn	18074	18730	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	18067	18730	1082	+	.	.
scaffold41480	subtractBed	intrn	19903	19953	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	19903	19953	66	+	.	.
scaffold41480	subtractBed	intrn	20835	20910	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	20835	20910	116	+	.	.
scaffold41480	subtractBed	intrn	23637	23671	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	23637	23671	52	+	.	.
scaffold41480	subtractBed	intrn	23708	23787	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	23708	23787	74	+	.	.
scaffold41480	subtractBed	intrn	23713	23791	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	23713	23791	67	+	.	.
scaffold41480	subtractBed	intrn	23708	23791	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	23708	23791	60	+	.	.
scaffold41480	subtractBed	intrn	24123	24580	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	24123	24580	637	+	.	.
scaffold41480	subtractBed	intrn	23998	24516	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	23998	24516	399	+	.	.
scaffold41480	subtractBed	intrn	24685	25170	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	24685	25173	906	+	.	.
scaffold41480	subtractBed	intrn	25258	26457	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	25245	26457	1190	+	.	.
scaffold41480	subtractBed	intrn	28771	28836	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	28771	28836	96	+	.	.
scaffold41480	subtractBed	intrn	29831	30015	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	29831	30015	244	+	.	.
scaffold41480	subtractBed	intrn	31426	31955	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	31417	31955	734	+	.	.
scaffold41480	subtractBed	intrn	34264	34324	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	34264	34324	81	+	.	.
scaffold41480	subtractBed	intrn	34372	34403	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	34372	34403	64	+	.	.
scaffold41480	subtractBed	intrn	34475	34541	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	34475	34541	134	+	.	.
scaffold41480	subtractBed	intrn	50198	50338	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	50198	50338	273	+	.	.
scaffold41480	subtractBed	intrn	50332	50474	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	50332	50474	243	+	.	.
scaffold41480	subtractBed	intrn	53404	53509	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	53404	53509	106	+	.	.
scaffold41480	subtractBed	intrn	62132	62197	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	62132	62197	123	+	.	.
scaffold41480	subtractBed	intrn	62228	63107	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	62228	63107	1670	+	.	.
scaffold41480	subtractBed	intrn	64449	64583	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	64449	64583	155	+	.	.
scaffold41480	subtractBed	intrn	65486	65510	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	65486	65510	50	+	.	.
scaffold41480	subtractBed	intrn	65853	65906	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	65853	65906	108	+	.	.
scaffold41480	subtractBed	intrn	65947	65986	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	65947	65986	80	+	.	.
scaffold41480	subtractBed	intrn	68771	68807	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	68771	68807	74	+	.	.
scaffold41480	subtractBed	intrn	69384	69525	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	69384	69525	117	+	.	.
scaffold41480	subtractBed	intrn	70298	70345	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	70298	70345	55	+	.	.
scaffold41480	subtractBed	intrn	70473	70601	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	70473	70601	77	+	.	.
scaffold41480	subtractBed	intrn	70493	70601	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	70493	70601	75	+	.	.
scaffold41480	subtractBed	intrn	70505	70614	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	70505	70614	67	+	.	.
scaffold41480	subtractBed	intrn	72787	72900	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	72787	72900	147	+	.	.
scaffold41480	subtractBed	intrn	72789	72937	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	72789	72937	121	+	.	.
scaffold41480	subtractBed	intrn	73033	73058	.	+	.	Parent=CGI_10005126;
	scaffold41480	TRF	Tandem_Repeat	73033	73058	52	+	.	.
scaffold41480	subtractBed	intrn	86316	86726	.	+	.	Parent=CGI_10005127;
	scaffold41480	TRF	Tandem_Repeat	86316	86726	653	+	.	.
scaffold41480	subtractBed	intrn	89755	89822	.	+	.	Parent=CGI_10005127;
	scaffold41480	TRF	Tandem_Repeat	89755	89822	66	+	.	.
scaffold41480	subtractBed	intrn	90848	91014	.	+	.	Parent=CGI_10005127;
	scaffold41480	TRF	Tandem_Repeat	90848	91014	149	+	.	.
scaffold41480	subtractBed	intrn	90829	91080	.	+	.	Parent=CGI_10005127;
	scaffold41480	TRF	Tandem_Repeat	90829	91080	262	+	.	.
scaffold415	subtractBed	intrn	27788	27852	.	+	.	Parent=CGI_10004216;
	scaffold415	TRF	Tandem_Repeat	27788	27852	130	+	.	.
scaffold415	subtractBed	intrn	27852	27881	.	+	.	Parent=CGI_10004216;
	scaffold415	TRF	Tandem_Repeat	27852	27881	60	+	.	.
scaffold415	subtractBed	intrn	28783	28819	.	+	.	Parent=CGI_10004216;
	scaffold415	TRF	Tandem_Repeat	28783	28819	74	+	.	.
scaffold415	subtractBed	intrn	38300	38358	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	38300	38358	59	+	.	.
scaffold415	subtractBed	intrn	38309	38365	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	38309	38365	66	+	.	.
scaffold415	subtractBed	intrn	38300	38364	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	38300	38364	69	+	.	.
scaffold415	subtractBed	intrn	38309	38358	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	38309	38358	57	+	.	.
scaffold415	subtractBed	intrn	40038	40077	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	40038	40077	80	+	.	.
scaffold415	subtractBed	intrn	41499	41529	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	41499	41529	62	+	.	.
scaffold415	subtractBed	intrn	44905	47013	.	-	.	Parent=CGI_10004218;
	scaffold415	WUBlastX	LINE_RTE-BovB	44905	47013	1590	+	.	.
scaffold415	subtractBed	intrn	47028	47825	.	-	.	Parent=CGI_10004218;
	scaffold415	WUBlastX	LINE_RTE-BovB	47028	47825	574	+	.	.
scaffold415	subtractBed	intrn	49307	49366	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	49307	49366	102	+	.	.
scaffold415	subtractBed	intrn	51118	51386	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	51118	51386	141	+	.	.
scaffold415	subtractBed	intrn	51117	51385	.	-	.	Parent=CGI_10004218;
	scaffold415	TRF	Tandem_Repeat	51117	51385	263	+	.	.
scaffold41502	subtractBed	intrn	5604	5655	.	+	.	Parent=CGI_10005171;
	scaffold41502	TRF	Tandem_Repeat	5604	5655	104	+	.	.
scaffold41502	subtractBed	intrn	9306	9361	.	+	.	Parent=CGI_10005171;
	scaffold41502	TRF	Tandem_Repeat	9306	9361	112	+	.	.
scaffold41502	subtractBed	intrn	14998	15058	.	+	.	Parent=CGI_10005171;
	scaffold41502	TRF	Tandem_Repeat	14998	15058	52	+	.	.
scaffold41502	subtractBed	intrn	17108	17325	.	+	.	Parent=CGI_10005171;
	scaffold41502	TRF	Tandem_Repeat	17108	17325	196	+	.	.
scaffold41502	subtractBed	intrn	17430	17555	.	+	.	Parent=CGI_10005171;
	scaffold41502	TRF	Tandem_Repeat	17430	17555	225	+	.	.
scaffold41502	subtractBed	intrn	27636	28853	.	+	.	Parent=CGI_10005171;
	scaffold41502	WUBlastX	DNA_MuDR	27636	28853	153	+	.	.
scaffold41502	subtractBed	intrn	50572	50607	.	-	.	Parent=CGI_10005172;
	scaffold41502	TRF	Tandem_Repeat	50572	50607	72	+	.	.
scaffold41502	subtractBed	intrn	72062	72191	.	+	.	Parent=CGI_10005174;
	scaffold41502	TRF	Tandem_Repeat	72062	72191	75	+	.	.
scaffold41502	subtractBed	intrn	72115	72197	.	+	.	Parent=CGI_10005174;
	scaffold41502	TRF	Tandem_Repeat	72115	72197	51	+	.	.
scaffold41502	subtractBed	intrn	72082	72197	.	+	.	Parent=CGI_10005174;
	scaffold41502	TRF	Tandem_Repeat	72082	72197	92	+	.	.
scaffold41502	subtractBed	intrn	83143	83174	.	+	.	Parent=CGI_10005174;
	scaffold41502	TRF	Tandem_Repeat	83143	83174	55	+	.	.
scaffold41502	subtractBed	intrn	104398	104658	.	+	.	Parent=CGI_10005175;
	scaffold41502	TRF	Tandem_Repeat	104398	104658	432	+	.	.
scaffold41502	subtractBed	intrn	105464	105766	.	+	.	Parent=CGI_10005175;
	scaffold41502	TRF	Tandem_Repeat	105464	105766	516	+	.	.
scaffold41502	subtractBed	intrn	106329	106515	.	+	.	Parent=CGI_10005175;
	scaffold41502	TRF	Tandem_Repeat	106329	106515	266	+	.	.
scaffold41502	subtractBed	intrn	106958	107060	.	+	.	Parent=CGI_10005175;
	scaffold41502	TRF	Tandem_Repeat	106958	107060	161	+	.	.
scaffold41502	subtractBed	intrn	107523	107745	.	+	.	Parent=CGI_10005175;
	scaffold41502	TRF	Tandem_Repeat	107523	107745	356	+	.	.
scaffold41530	subtractBed	intrn	33516	33547	.	+	.	Parent=CGI_10005185;
	scaffold41530	TRF	Tandem_Repeat	33516	33547	64	+	.	.
scaffold41530	subtractBed	intrn	49373	50501	.	-	.	Parent=CGI_10005186;
	scaffold41530	TRF	Tandem_Repeat	49373	50501	1098	+	.	.
scaffold41530	subtractBed	intrn	49367	50501	.	-	.	Parent=CGI_10005186;
	scaffold41530	TRF	Tandem_Repeat	49367	50501	1348	+	.	.
scaffold41530	subtractBed	intrn	49420	50501	.	-	.	Parent=CGI_10005186;
	scaffold41530	TRF	Tandem_Repeat	49420	50501	1661	+	.	.
scaffold41530	subtractBed	intrn	97769	97814	.	+	.	Parent=CGI_10005191;
	scaffold41530	TRF	Tandem_Repeat	97769	97814	65	+	.	.
scaffold41530	subtractBed	intrn	97954	98002	.	+	.	Parent=CGI_10005191;
	scaffold41530	TRF	Tandem_Repeat	97954	98002	98	+	.	.
scaffold41534	subtractBed	intrn	1390	1471	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	1390	1471	137	+	.	.
scaffold41534	subtractBed	intrn	8841	9166	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	8822	9166	247	+	.	.
scaffold41534	subtractBed	intrn	11591	11790	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	11570	11790	243	+	.	.
scaffold41534	subtractBed	intrn	15910	16159	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	15895	16159	476	+	.	.
scaffold41534	subtractBed	intrn	17469	17508	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	17469	17508	62	+	.	.
scaffold41534	subtractBed	intrn	22730	22762	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	22730	22762	66	+	.	.
scaffold41534	subtractBed	intrn	28726	29068	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	28726	29068	488	+	.	.
scaffold41534	subtractBed	intrn	30040	30123	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	30040	30123	107	+	.	.
scaffold41534	subtractBed	intrn	44083	44134	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	44083	44134	68	+	.	.
scaffold41534	subtractBed	intrn	51865	51974	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	51865	51974	86	+	.	.
scaffold41534	subtractBed	intrn	55294	55340	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	55294	55340	60	+	.	.
scaffold41534	subtractBed	intrn	63989	64091	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	63989	64091	80	+	.	.
scaffold41534	subtractBed	intrn	64180	64590	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	64180	64590	267	+	.	.
scaffold41534	subtractBed	intrn	64235	64590	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	64235	64590	207	+	.	.
scaffold41534	subtractBed	intrn	64273	64590	.	+	.	Parent=CGI_10005249;
	scaffold41534	TRF	Tandem_Repeat	64273	64590	219	+	.	.
scaffold41540	subtractBed	intrn	18571	18628	.	+	.	Parent=CGI_10005243;
	scaffold41540	TRF	Tandem_Repeat	18571	18628	82	+	.	.
scaffold41540	subtractBed	intrn	18571	18628	.	+	.	Parent=CGI_10005243;
	scaffold41540	TRF	Tandem_Repeat	18571	18628	82	+	.	.
scaffold41540	subtractBed	intrn	18583	18628	.	+	.	Parent=CGI_10005243;
	scaffold41540	TRF	Tandem_Repeat	18583	18628	56	+	.	.
scaffold41540	subtractBed	intrn	27222	27274	.	+	.	Parent=CGI_10005243;
	scaffold41540	TRF	Tandem_Repeat	27222	27274	88	+	.	.
scaffold41540	subtractBed	intrn	63518	63584	.	+	.	Parent=CGI_10005245;
	scaffold41540	TRF	Tandem_Repeat	63518	63584	89	+	.	.
scaffold41540	subtractBed	intrn	85635	85662	.	+	.	Parent=CGI_10005247;
	scaffold41540	TRF	Tandem_Repeat	85635	85662	56	+	.	.
scaffold41540	subtractBed	intrn	85661	85688	.	+	.	Parent=CGI_10005247;
	scaffold41540	TRF	Tandem_Repeat	85661	85688	56	+	.	.
scaffold41546	subtractBed	intrn	47880	48590	.	+	.	Parent=CGI_10005268;
	scaffold41546	WUBlastX	LINE_L1-Tx1	47880	48590	500	-	.	.
scaffold41546	subtractBed	intrn	49474	49526	.	+	.	Parent=CGI_10005268;
	scaffold41546	TRF	Tandem_Repeat	49474	49526	70	+	.	.
scaffold41546	subtractBed	intrn	48903	49376	.	+	.	Parent=CGI_10005268;
	scaffold41546	WUBlastX	LINE_L2	48903	49376	95	-	.	.
scaffold41546	subtractBed	intrn	48906	49622	.	+	.	Parent=CGI_10005268;
	scaffold41546	WUBlastX	LINE_L2	48906	49622	83	-	.	.
scaffold41546	subtractBed	intrn	104454	104588	.	+	.	Parent=CGI_10005272;
	scaffold41546	TRF	Tandem_Repeat	104454	104588	193	+	.	.
scaffold41546	subtractBed	intrn	113494	113537	.	+	.	Parent=CGI_10005272;
	scaffold41546	TRF	Tandem_Repeat	113494	113537	61	+	.	.
scaffold41550	subtractBed	intrn	4041	4111	.	+	.	Parent=CGI_10005235;
	scaffold41550	TRF	Tandem_Repeat	4041	4111	70	+	.	.
scaffold41550	subtractBed	intrn	4037	4099	.	+	.	Parent=CGI_10005235;
	scaffold41550	TRF	Tandem_Repeat	4037	4099	65	+	.	.
scaffold41550	subtractBed	intrn	6424	6689	.	+	.	Parent=CGI_10005235;
	scaffold41550	TRF	Tandem_Repeat	6424	6689	229	+	.	.
scaffold41550	subtractBed	intrn	6413	6689	.	+	.	Parent=CGI_10005235;
	scaffold41550	TRF	Tandem_Repeat	6413	6689	186	+	.	.
scaffold41550	subtractBed	intrn	9559	9599	.	+	.	Parent=CGI_10005235;
	scaffold41550	TRF	Tandem_Repeat	9559	9599	82	+	.	.
scaffold41550	subtractBed	intrn	13158	13191	.	-	.	Parent=CGI_10005236;
	scaffold41550	TRF	Tandem_Repeat	13158	13191	54	+	.	.
scaffold41560	subtractBed	intrn	84180	84432	.	-	.	Parent=CGI_10005282;
	scaffold41560	TRF	Tandem_Repeat	84180	84432	376	+	.	.
scaffold41560	subtractBed	intrn	86457	86555	.	-	.	Parent=CGI_10005282;
	scaffold41560	WUBlastX	LINE_CR1	86457	86555	37	-	.	.
scaffold41560	subtractBed	intrn	86036	86413	.	-	.	Parent=CGI_10005282;
	scaffold41560	WUBlastX	LINE_L2	86036	86413	112	-	.	.
scaffold41560	subtractBed	intrn	86027	86482	.	-	.	Parent=CGI_10005282;
	scaffold41560	WUBlastX	LINE_CR1-L2	86027	86482	81	-	.	.
scaffold41560	subtractBed	intrn	107209	107256	.	+	.	Parent=CGI_10005285;
	scaffold41560	TRF	Tandem_Repeat	107209	107256	96	+	.	.
scaffold41560	subtractBed	intrn	109161	109610	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	109161	109610	125	+	.	.
scaffold41560	subtractBed	intrn	110175	110351	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	110175	110351	50	+	.	.
scaffold41560	subtractBed	intrn	109161	109541	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	109161	109541	181	+	.	.
scaffold41560	subtractBed	intrn	110217	110426	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	110217	110426	66	+	.	.
scaffold41560	subtractBed	intrn	109083	109541	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	109083	109541	111	+	.	.
scaffold41560	subtractBed	intrn	110121	110315	.	+	.	Parent=CGI_10005285;
	scaffold41560	WUBlastX	LINE_RTE-X	110121	110315	21	+	.	.
scaffold41560	subtractBed	intrn	112199	112231	.	+	.	Parent=CGI_10005285;
	scaffold41560	TRF	Tandem_Repeat	112199	112231	57	+	.	.
scaffold41568	subtractBed	intrn	75669	76832	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	DNA_Crypton	75669	76832	200	+	.	.
scaffold41568	subtractBed	intrn	79618	79659	.	+	.	Parent=CGI_10005300;
	scaffold41568	TRF	Tandem_Repeat	79618	79659	50	+	.	.
scaffold41568	subtractBed	intrn	77737	77961	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LINE_RTE-X	77737	77961	25	-	.	.
scaffold41568	subtractBed	intrn	78120	78305	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LINE_RTE-X	78120	78305	76	-	.	.
scaffold41568	subtractBed	intrn	78117	78443	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LINE_RTE-X	78117	78443	24	-	.	.
scaffold41568	subtractBed	intrn	77939	78112	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LINE_RTE-X	77939	78112	42	-	.	.
scaffold41568	subtractBed	intrn	77746	77895	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LINE_RTE-X	77746	77895	36	-	.	.
scaffold41568	subtractBed	intrn	86065	86145	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	86065	86145	25	+	.	.
scaffold41568	subtractBed	intrn	86151	88502	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	86151	88502	1891	+	.	.
scaffold41568	subtractBed	intrn	89055	89894	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	89055	89894	605	+	.	.
scaffold41568	subtractBed	intrn	84989	85408	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	84989	85408	266	+	.	.
scaffold41568	subtractBed	intrn	85441	85632	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	85441	85632	98	+	.	.
scaffold41568	subtractBed	intrn	85661	85885	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	85661	85885	50	+	.	.
scaffold41568	subtractBed	intrn	86124	86213	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	86124	86213	29	+	.	.
scaffold41568	subtractBed	intrn	86871	89534	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	86871	89534	636	+	.	.
scaffold41568	subtractBed	intrn	89055	90053	.	+	.	Parent=CGI_10005300;
	scaffold41568	WUBlastX	LTR_Gypsy	89055	90053	129	+	.	.
scaffold41572	subtractBed	intrn	33315	33367	.	+	.	Parent=CGI_10005293;
	scaffold41572	TRF	Tandem_Repeat	33315	33367	106	+	.	.
scaffold41572	subtractBed	intrn	33443	33504	.	+	.	Parent=CGI_10005293;
	scaffold41572	TRF	Tandem_Repeat	33443	33504	97	+	.	.
scaffold41572	subtractBed	intrn	39352	39403	.	+	.	Parent=CGI_10005293;
	scaffold41572	TRF	Tandem_Repeat	39352	39403	68	+	.	.
scaffold41572	subtractBed	intrn	39373	39418	.	+	.	Parent=CGI_10005293;
	scaffold41572	TRF	Tandem_Repeat	39373	39418	65	+	.	.
scaffold41572	subtractBed	intrn	39352	39418	.	+	.	Parent=CGI_10005293;
	scaffold41572	TRF	Tandem_Repeat	39352	39418	89	+	.	.
scaffold41572	subtractBed	intrn	45141	45194	.	+	.	Parent=CGI_10005294;
	scaffold41572	TRF	Tandem_Repeat	45141	45194	90	+	.	.
scaffold41572	subtractBed	intrn	45641	46286	.	+	.	Parent=CGI_10005294;
	scaffold41572	TRF	Tandem_Repeat	45637	46286	924	+	.	.
scaffold41572	subtractBed	intrn	75081	75326	.	-	.	Parent=CGI_10005295;
	scaffold41572	TRF	Tandem_Repeat	75081	75326	171	+	.	.
scaffold41572	subtractBed	intrn	75114	75325	.	-	.	Parent=CGI_10005295;
	scaffold41572	TRF	Tandem_Repeat	75114	75325	174	+	.	.
scaffold41572	subtractBed	intrn	85457	85670	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	85457	85670	315	+	.	.
scaffold41572	subtractBed	intrn	89956	90374	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	89956	90374	468	+	.	.
scaffold41572	subtractBed	intrn	93757	94724	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	93757	94724	1433	+	.	.
scaffold41572	subtractBed	intrn	93757	94724	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	93757	94724	1359	+	.	.
scaffold41572	subtractBed	intrn	93757	94724	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	93757	94724	1461	+	.	.
scaffold41572	subtractBed	intrn	96198	96400	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	96198	96400	334	+	.	.
scaffold41572	subtractBed	intrn	97130	98660	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	97130	98660	2433	+	.	.
scaffold41572	subtractBed	intrn	102705	103045	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	102705	103045	619	+	.	.
scaffold41572	subtractBed	intrn	103128	103382	.	+	.	Parent=CGI_10005296;
	scaffold41572	TRF	Tandem_Repeat	103128	103417	553	+	.	.
scaffold41572	subtractBed	intrn	115583	115624	.	+	.	Parent=CGI_10005297;
	scaffold41572	TRF	Tandem_Repeat	115583	115624	84	+	.	.
scaffold41572	subtractBed	intrn	117695	117777	.	+	.	Parent=CGI_10005297;
	scaffold41572	TRF	Tandem_Repeat	117695	117777	159	+	.	.
scaffold41588	subtractBed	intrn	6900	7064	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	6900	7064	86	+	.	.
scaffold41588	subtractBed	intrn	6941	7066	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	6941	7066	94	+	.	.
scaffold41588	subtractBed	intrn	10784	11214	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	10784	11214	509	+	.	.
scaffold41588	subtractBed	intrn	10784	11948	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	10784	11948	1009	+	.	.
scaffold41588	subtractBed	intrn	10782	11948	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	10782	11948	1040	+	.	.
scaffold41588	subtractBed	intrn	11237	11948	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	11237	11948	573	+	.	.
scaffold41588	subtractBed	intrn	11237	11948	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	11237	11948	614	+	.	.
scaffold41588	subtractBed	intrn	14142	14493	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	14127	14493	553	+	.	.
scaffold41588	subtractBed	intrn	14267	14332	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	14267	14332	75	+	.	.
scaffold41588	subtractBed	intrn	15771	15810	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	15771	15810	50	+	.	.
scaffold41588	subtractBed	intrn	15980	17133	.	+	.	Parent=CGI_10005252;
	scaffold41588	TRF	Tandem_Repeat	15980	17133	1359	+	.	.
scaffold41588	subtractBed	intrn	31920	32179	.	-	.	Parent=CGI_10005253;
	scaffold41588	TRF	Tandem_Repeat	31920	32179	269	+	.	.
scaffold41588	subtractBed	intrn	43144	43510	.	+	.	Parent=CGI_10005254;
	scaffold41588	TRF	Tandem_Repeat	43144	43510	303	+	.	.
scaffold41588	subtractBed	intrn	52709	52900	.	-	.	Parent=CGI_10005255;
	scaffold41588	TRF	Tandem_Repeat	52709	52900	321	+	.	.
scaffold41588	subtractBed	intrn	61386	62003	.	-	.	Parent=CGI_10005255;
	scaffold41588	WUBlastX	LINE_RTE-X	61386	62003	73	-	.	.
scaffold41588	subtractBed	intrn	68236	68562	.	-	.	Parent=CGI_10005255;
	scaffold41588	TRF	Tandem_Repeat	68236	68562	430	+	.	.
scaffold41588	subtractBed	intrn	68236	68539	.	-	.	Parent=CGI_10005255;
	scaffold41588	TRF	Tandem_Repeat	68236	68539	486	+	.	.
scaffold41594	subtractBed	intrn	14423	14930	.	-	.	Parent=CGI_10005291;
	scaffold41594	TRF	Tandem_Repeat	14423	14930	554	+	.	.
scaffold41594	subtractBed	intrn	14641	15009	.	-	.	Parent=CGI_10005291;
	scaffold41594	TRF	Tandem_Repeat	14641	15009	370	+	.	.
scaffold41594	subtractBed	intrn	16985	17023	.	-	.	Parent=CGI_10005291;
	scaffold41594	TRF	Tandem_Repeat	16985	17023	78	+	.	.
scaffold41598	subtractBed	intrn	34365	34411	.	-	.	Parent=CGI_10005303;
	scaffold41598	TRF	Tandem_Repeat	34365	34411	94	+	.	.
scaffold41598	subtractBed	intrn	63940	64024	.	-	.	Parent=CGI_10005304;
	scaffold41598	TRF	Tandem_Repeat	63940	64024	161	+	.	.
scaffold41598	subtractBed	intrn	61070	61492	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_En-Spm	61070	61492	119	-	.	.
scaffold41598	subtractBed	intrn	61492	61686	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_En-Spm	61492	61686	22	-	.	.
scaffold41598	subtractBed	intrn	65707	65775	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	65707	65775	31	-	.	.
scaffold41598	subtractBed	intrn	66464	66574	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66464	66574	53	-	.	.
scaffold41598	subtractBed	intrn	66808	66969	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66808	66969	36	-	.	.
scaffold41598	subtractBed	intrn	66159	66365	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66159	66365	123	-	.	.
scaffold41598	subtractBed	intrn	65913	66404	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	65913	66404	72	-	.	.
scaffold41598	subtractBed	intrn	66865	67101	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66865	67101	51	-	.	.
scaffold41598	subtractBed	intrn	66159	66413	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66159	66413	104	-	.	.
scaffold41598	subtractBed	intrn	66009	66413	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66009	66413	94	-	.	.
scaffold41598	subtractBed	intrn	66446	66586	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66446	66586	52	-	.	.
scaffold41598	subtractBed	intrn	66380	66574	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	66380	66574	40	-	.	.
scaffold41598	subtractBed	intrn	69858	69916	.	-	.	Parent=CGI_10005304;
	scaffold41598	TRF	Tandem_Repeat	69858	69916	109	+	.	.
scaffold41598	subtractBed	intrn	74305	74463	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_PiggyBac	74305	74463	52	-	.	.
scaffold41598	subtractBed	intrn	73493	73783	.	-	.	Parent=CGI_10005304;
	scaffold41598	WUBlastX	DNA_hAT-Tip100	73493	73783	148	-	.	.
scaffold416	subtractBed	intrn	15323	15368	.	-	.	Parent=CGI_10014735;
	scaffold416	TRF	Tandem_Repeat	15323	15368	65	+	.	.
scaffold416	subtractBed	intrn	16545	16664	.	-	.	Parent=CGI_10014735;
	scaffold416	WUBlastX	LINE_Penelope	16545	16664	88	-	.	.
scaffold416	subtractBed	intrn	46574	46652	.	-	.	Parent=CGI_10014736;
	scaffold416	TRF	Tandem_Repeat	46574	46652	63	+	.	.
scaffold416	subtractBed	intrn	134377	134497	.	+	.	Parent=CGI_10014739;
	scaffold416	TRF	Tandem_Repeat	134377	134497	188	+	.	.
scaffold416	subtractBed	intrn	134950	134988	.	+	.	Parent=CGI_10014739;
	scaffold416	TRF	Tandem_Repeat	134950	134988	78	+	.	.
scaffold416	subtractBed	intrn	137325	137390	.	+	.	Parent=CGI_10014739;
	scaffold416	TRF	Tandem_Repeat	137325	137390	107	+	.	.
scaffold416	subtractBed	intrn	139615	139743	.	+	.	Parent=CGI_10014740;
	scaffold416	TRF	Tandem_Repeat	139615	139743	103	+	.	.
scaffold416	subtractBed	intrn	139605	139727	.	+	.	Parent=CGI_10014740;
	scaffold416	TRF	Tandem_Repeat	139605	139727	185	+	.	.
scaffold416	subtractBed	intrn	150420	150460	.	+	.	Parent=CGI_10014740;
	scaffold416	TRF	Tandem_Repeat	150420	150460	73	+	.	.
scaffold416	subtractBed	intrn	160529	160708	.	+	.	Parent=CGI_10014740;
	scaffold416	WUBlastX	LINE_RTE-X	160529	160708	76	-	.	.
scaffold416	subtractBed	intrn	160535	160762	.	+	.	Parent=CGI_10014740;
	scaffold416	WUBlastX	LINE_RTE-X	160535	160762	33	-	.	.
scaffold416	subtractBed	intrn	186287	186481	.	-	.	Parent=CGI_10014741;
	scaffold416	TRF	Tandem_Repeat	186287	186481	149	+	.	.
scaffold416	subtractBed	intrn	186442	186798	.	-	.	Parent=CGI_10014741;
	scaffold416	TRF	Tandem_Repeat	186442	186798	278	+	.	.
scaffold416	subtractBed	intrn	268092	268124	.	-	.	Parent=CGI_10014744;
	scaffold416	TRF	Tandem_Repeat	268092	268124	66	+	.	.
scaffold416	subtractBed	intrn	320337	320374	.	+	.	Parent=CGI_10014748;
	scaffold416	WUBlastX	DNA_hAT	320337	320816	47	+	.	.
scaffold416	subtractBed	intrn	328181	328228	.	+	.	Parent=CGI_10014749;
	scaffold416	WUBlastX	DNA_Harbinger	328181	328555	62	+	.	.
scaffold416	subtractBed	intrn	328529	328555	.	+	.	Parent=CGI_10014749;
	scaffold416	WUBlastX	DNA_Harbinger	328181	328555	62	+	.	.
scaffold416	subtractBed	intrn	358314	359598	.	-	.	Parent=CGI_10014750;
	scaffold416	TRF	Tandem_Repeat	358314	359598	1781	+	.	.
scaffold416	subtractBed	intrn	359629	359688	.	-	.	Parent=CGI_10014750;
	scaffold416	TRF	Tandem_Repeat	359629	359688	84	+	.	.
scaffold416	subtractBed	intrn	407547	407583	.	-	.	Parent=CGI_10014752;
	scaffold416	TRF	Tandem_Repeat	407547	407583	67	+	.	.
scaffold41604	subtractBed	intrn	54635	54669	.	-	.	Parent=CGI_10005160;
	scaffold41604	TRF	Tandem_Repeat	54635	54669	52	+	.	.
scaffold41628	subtractBed	intrn	35368	35793	.	-	.	Parent=CGI_10005328;
	scaffold41628	TRF	Tandem_Repeat	35368	35825	655	+	.	.
scaffold41628	subtractBed	intrn	35692	35793	.	-	.	Parent=CGI_10005328;
	scaffold41628	TRF	Tandem_Repeat	35692	35802	67	+	.	.
scaffold41628	subtractBed	intrn	39838	40315	.	-	.	Parent=CGI_10005328;
	scaffold41628	TRF	Tandem_Repeat	39838	40315	582	+	.	.
scaffold41628	subtractBed	intrn	41673	42359	.	-	.	Parent=CGI_10005328;
	scaffold41628	WUBlastX	DNA_TcMar-Pogo	41673	42359	262	-	.	.
scaffold41628	subtractBed	intrn	56134	56158	.	+	.	Parent=CGI_10005329;
	scaffold41628	TRF	Tandem_Repeat	56134	56158	50	+	.	.
scaffold41628	subtractBed	intrn	71611	71647	.	+	.	Parent=CGI_10005331;
	scaffold41628	TRF	Tandem_Repeat	71611	71647	74	+	.	.
scaffold41628	subtractBed	intrn	76689	76805	.	+	.	Parent=CGI_10005331;
	scaffold41628	TRF	Tandem_Repeat	76689	76805	105	+	.	.
scaffold41628	subtractBed	intrn	76689	76802	.	+	.	Parent=CGI_10005331;
	scaffold41628	TRF	Tandem_Repeat	76689	76802	115	+	.	.
scaffold41628	subtractBed	intrn	76689	76805	.	+	.	Parent=CGI_10005331;
	scaffold41628	TRF	Tandem_Repeat	76689	76805	106	+	.	.
scaffold41650	subtractBed	intrn	5029	5076	.	+	.	Parent=CGI_10005337;
	scaffold41650	TRF	Tandem_Repeat	5029	5076	96	+	.	.
scaffold41650	subtractBed	intrn	3844	4833	.	+	.	Parent=CGI_10005337;
	scaffold41650	WUBlastX	LINE_L2	3844	4833	466	-	.	.
scaffold41650	subtractBed	intrn	3940	4992	.	+	.	Parent=CGI_10005337;
	scaffold41650	WUBlastX	LINE_CR1	3940	4992	139	-	.	.
scaffold41650	subtractBed	intrn	4875	5015	.	+	.	Parent=CGI_10005337;
	scaffold41650	WUBlastX	LINE_CR1-L2	4875	5015	68	-	.	.
scaffold41650	subtractBed	intrn	5943	6074	.	+	.	Parent=CGI_10005337;
	scaffold41650	WUBlastX	LINE_L2	5943	6074	35	-	.	.
scaffold41650	subtractBed	intrn	3705	3839	.	+	.	Parent=CGI_10005337;
	scaffold41650	WUBlastX	LINE_I	3705	3839	46	-	.	.
scaffold41650	subtractBed	intrn	10857	10916	.	+	.	Parent=CGI_10005337;
	scaffold41650	TRF	Tandem_Repeat	10857	10916	120	+	.	.
scaffold41650	subtractBed	intrn	11762	11865	.	+	.	Parent=CGI_10005337;
	scaffold41650	TRF	Tandem_Repeat	11762	11865	153	+	.	.
scaffold41650	subtractBed	intrn	23434	23478	.	+	.	Parent=CGI_10005337;
	scaffold41650	TRF	Tandem_Repeat	23434	23478	83	+	.	.
scaffold41650	subtractBed	intrn	30961	30989	.	+	.	Parent=CGI_10005337;
	scaffold41650	TRF	Tandem_Repeat	30961	30989	58	+	.	.
scaffold41650	subtractBed	intrn	82358	82392	.	-	.	Parent=CGI_10005338;
	scaffold41650	TRF	Tandem_Repeat	82358	82392	52	+	.	.
scaffold41650	subtractBed	intrn	106180	106463	.	-	.	Parent=CGI_10005339;
	scaffold41650	TRF	Tandem_Repeat	106180	106463	300	+	.	.
scaffold41652	subtractBed	intrn	5653	6723	.	-	.	Parent=CGI_10005379;
	scaffold41652	WUBlastX	LINE_L1-Tx1	5653	6723	119	+	.	.
scaffold41652	subtractBed	intrn	25541	25576	.	-	.	Parent=CGI_10005379;
	scaffold41652	TRF	Tandem_Repeat	25541	25576	54	+	.	.
scaffold41652	subtractBed	intrn	60714	60783	.	-	.	Parent=CGI_10005382;
	scaffold41652	TRF	Tandem_Repeat	60714	60783	140	+	.	.
scaffold41652	subtractBed	intrn	84210	84872	.	-	.	Parent=CGI_10005384;
	scaffold41652	TRF	Tandem_Repeat	84210	84872	898	+	.	.
scaffold41652	subtractBed	intrn	99080	99152	.	+	.	Parent=CGI_10005386;
	scaffold41652	TRF	Tandem_Repeat	99080	99152	139	+	.	.
scaffold41652	subtractBed	intrn	101324	102348	.	+	.	Parent=CGI_10005386;
	scaffold41652	TRF	Tandem_Repeat	101324	102348	1063	+	.	.
scaffold41656	subtractBed	intrn	2799	2859	.	+	.	Parent=CGI_10005388;
	scaffold41656	TRF	Tandem_Repeat	2799	2859	122	+	.	.
scaffold41656	subtractBed	intrn	31730	31778	.	-	.	Parent=CGI_10005390;
	scaffold41656	TRF	Tandem_Repeat	31730	31778	98	+	.	.
scaffold41656	subtractBed	intrn	99572	99648	.	+	.	Parent=CGI_10005392;
	scaffold41656	TRF	Tandem_Repeat	99572	99648	90	+	.	.
scaffold41656	subtractBed	intrn	118378	118431	.	+	.	Parent=CGI_10005393;
	scaffold41656	TRF	Tandem_Repeat	118378	118431	92	+	.	.
scaffold41660	subtractBed	intrn	984	1030	.	-	.	Parent=CGI_10005395;
	scaffold41660	TRF	Tandem_Repeat	984	1030	94	+	.	.
scaffold41660	subtractBed	intrn	80133	80936	.	+	.	Parent=CGI_10005399;
	scaffold41660	WUBlastX	LINE_RTE-X	80133	80936	180	-	.	.
scaffold41660	subtractBed	intrn	80103	81062	.	+	.	Parent=CGI_10005399;
	scaffold41660	WUBlastX	LINE_RTE-X	80103	81062	161	-	.	.
scaffold41660	subtractBed	intrn	100880	100923	.	-	.	Parent=CGI_10005400;
	scaffold41660	TRF	Tandem_Repeat	100880	100923	61	+	.	.
scaffold41660	subtractBed	intrn	101106	102286	.	-	.	Parent=CGI_10005400;
	scaffold41660	TRF	Tandem_Repeat	101106	102286	1342	+	.	.
scaffold41660	subtractBed	intrn	105264	105397	.	-	.	Parent=CGI_10005400;
	scaffold41660	TRF	Tandem_Repeat	105264	105397	123	+	.	.
scaffold41660	subtractBed	intrn	113124	113543	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	113124	113543	77	-	.	.
scaffold41660	subtractBed	intrn	113199	113663	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1	113199	113663	53	-	.	.
scaffold41660	subtractBed	intrn	109683	109904	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	109683	109904	64	-	.	.
scaffold41660	subtractBed	intrn	109560	109907	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	109560	109907	33	-	.	.
scaffold41660	subtractBed	intrn	109913	111604	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	109913	111604	943	-	.	.
scaffold41660	subtractBed	intrn	113735	114370	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	113735	114370	131	-	.	.
scaffold41660	subtractBed	intrn	113202	113543	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	113202	113543	151	-	.	.
scaffold41660	subtractBed	intrn	113831	114370	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	113831	114370	240	-	.	.
scaffold41660	subtractBed	intrn	114369	114926	.	+	.	Parent=CGI_10005401;
	scaffold41660	WUBlastX	LINE_L1-Tx1	114369	114926	263	-	.	.
scaffold41664	subtractBed	intrn	37939	37990	.	+	.	Parent=CGI_10005414;
	scaffold41664	TRF	Tandem_Repeat	37939	37990	95	+	.	.
scaffold41664	subtractBed	intrn	38370	38816	.	+	.	Parent=CGI_10005414;
	scaffold41664	WUBlastX	DNA_IS4EU	38370	38816	60	+	.	.
scaffold41664	subtractBed	intrn	78131	78341	.	+	.	Parent=CGI_10005416;
	scaffold41664	TRF	Tandem_Repeat	78131	78341	251	+	.	.
scaffold41664	subtractBed	intrn	85750	85977	.	+	.	Parent=CGI_10005416;
	scaffold41664	WUBlastX	LINE_Penelope	85750	85977	60	+	.	.
scaffold41664	subtractBed	intrn	87712	87939	.	+	.	Parent=CGI_10005416;
	scaffold41664	WUBlastX	LINE_Penelope	87712	87939	60	+	.	.
scaffold41664	subtractBed	intrn	124575	124604	.	+	.	Parent=CGI_10005419;
	scaffold41664	TRF	Tandem_Repeat	124575	124604	53	+	.	.
scaffold41666	subtractBed	intrn	6599	6637	.	+	.	Parent=CGI_10005374;
	scaffold41666	TRF	Tandem_Repeat	6599	6637	51	+	.	.
scaffold41666	subtractBed	intrn	11182	11214	.	+	.	Parent=CGI_10005374;
	scaffold41666	TRF	Tandem_Repeat	11182	11214	66	+	.	.
scaffold41666	subtractBed	intrn	11291	11347	.	+	.	Parent=CGI_10005374;
	scaffold41666	TRF	Tandem_Repeat	11291	11347	114	+	.	.
scaffold41666	subtractBed	intrn	39465	39994	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	39465	39994	554	+	.	.
scaffold41666	subtractBed	intrn	39465	40137	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	39465	40137	569	+	.	.
scaffold41666	subtractBed	intrn	39480	40075	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	39480	40075	111	+	.	.
scaffold41666	subtractBed	intrn	43313	43351	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	43313	43351	71	+	.	.
scaffold41666	subtractBed	intrn	45551	45605	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	45551	45605	110	+	.	.
scaffold41666	subtractBed	intrn	49171	49358	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49171	49358	128	+	.	.
scaffold41666	subtractBed	intrn	49171	49355	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49171	49355	149	+	.	.
scaffold41666	subtractBed	intrn	49299	49394	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49299	49394	106	+	.	.
scaffold41666	subtractBed	intrn	49298	49377	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49298	49377	97	+	.	.
scaffold41666	subtractBed	intrn	49297	49394	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49297	49394	90	+	.	.
scaffold41666	subtractBed	intrn	49970	50001	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	49970	50001	55	+	.	.
scaffold41666	subtractBed	intrn	50166	50222	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	50166	50222	114	+	.	.
scaffold41666	subtractBed	intrn	50312	50339	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	50312	50339	56	+	.	.
scaffold41666	subtractBed	intrn	51072	51115	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	51072	51115	88	+	.	.
scaffold41666	subtractBed	intrn	51775	51822	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	51775	51822	87	+	.	.
scaffold41666	subtractBed	intrn	54804	54867	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	54804	54867	128	+	.	.
scaffold41666	subtractBed	intrn	55591	55616	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	55591	55616	52	+	.	.
scaffold41666	subtractBed	intrn	59579	59670	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	59579	59670	145	+	.	.
scaffold41666	subtractBed	intrn	63609	63637	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	63609	63637	58	+	.	.
scaffold41666	subtractBed	intrn	63753	63805	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	63753	63805	88	+	.	.
scaffold41666	subtractBed	intrn	64203	64242	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	64203	64242	80	+	.	.
scaffold41666	subtractBed	intrn	67688	67736	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	67688	67736	89	+	.	.
scaffold41666	subtractBed	intrn	68246	68302	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	68246	68302	114	+	.	.
scaffold41666	subtractBed	intrn	68840	68905	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	68840	68905	96	+	.	.
scaffold41666	subtractBed	intrn	78457	78533	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	78457	78533	147	+	.	.
scaffold41666	subtractBed	intrn	82649	82689	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	82649	82689	64	+	.	.
scaffold41666	subtractBed	intrn	89101	89147	.	+	.	Parent=CGI_10005375;
	scaffold41666	TRF	Tandem_Repeat	89101	89147	87	+	.	.
scaffold41666	subtractBed	intrn	106139	106210	.	+	.	Parent=CGI_10005376;
	scaffold41666	TRF	Tandem_Repeat	106139	106210	73	+	.	.
scaffold41666	subtractBed	intrn	106139	106210	.	+	.	Parent=CGI_10005376;
	scaffold41666	TRF	Tandem_Repeat	106139	106210	90	+	.	.
scaffold41666	subtractBed	intrn	114262	114302	.	-	.	Parent=CGI_10005377;
	scaffold41666	TRF	Tandem_Repeat	114262	114302	82	+	.	.
scaffold41666	subtractBed	intrn	115247	115750	.	-	.	Parent=CGI_10005377;
	scaffold41666	WUBlastX	DNA_Harbinger	115247	115750	145	+	.	.
scaffold41684	subtractBed	intrn	34158	34182	.	-	.	Parent=CGI_10005434;
	scaffold41684	TRF	Tandem_Repeat	34158	34182	50	+	.	.
scaffold41684	subtractBed	intrn	43158	43505	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	43158	43505	143	+	.	.
scaffold41684	subtractBed	intrn	42784	43164	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	42784	43164	163	+	.	.
scaffold41684	subtractBed	intrn	43155	43442	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	43155	43442	176	+	.	.
scaffold41684	subtractBed	intrn	43197	43571	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	43197	43571	82	+	.	.
scaffold41684	subtractBed	intrn	42556	43146	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	42556	43146	54	+	.	.
scaffold41684	subtractBed	intrn	42120	42767	.	-	.	Parent=CGI_10005434;
	scaffold41684	WUBlastX	LTR_Ngaro	42120	42767	30	+	.	.
scaffold41684	subtractBed	intrn	47332	48124	.	-	.	Parent=CGI_10005434;
	scaffold41684	TRF	Tandem_Repeat	47332	48124	1365	+	.	.
scaffold41722	subtractBed	intrn	32006	32828	.	+	.	Parent=CGI_10005458;
	scaffold41722	TRF	Tandem_Repeat	32006	32828	1131	+	.	.
scaffold41722	subtractBed	intrn	32006	32925	.	+	.	Parent=CGI_10005458;
	scaffold41722	TRF	Tandem_Repeat	32006	32925	1081	+	.	.
scaffold41722	subtractBed	intrn	41876	42014	.	+	.	Parent=CGI_10005458;
	scaffold41722	TRF	Tandem_Repeat	41876	42014	269	+	.	.
scaffold41722	subtractBed	intrn	42142	42338	.	+	.	Parent=CGI_10005458;
	scaffold41722	TRF	Tandem_Repeat	42142	42338	349	+	.	.
scaffold41722	subtractBed	intrn	52310	52466	.	+	.	Parent=CGI_10005459;
	scaffold41722	TRF	Tandem_Repeat	52310	52466	188	+	.	.
scaffold41722	subtractBed	intrn	77896	78127	.	+	.	Parent=CGI_10005460;
	scaffold41722	TRF	Tandem_Repeat	77896	78127	455	+	.	.
scaffold41722	subtractBed	intrn	99687	100068	.	+	.	Parent=CGI_10005461;
	scaffold41722	TRF	Tandem_Repeat	99687	100068	595	+	.	.
scaffold41722	subtractBed	intrn	104251	104333	.	-	.	Parent=CGI_10005462;
	scaffold41722	TRF	Tandem_Repeat	104251	104333	58	+	.	.
scaffold41722	subtractBed	intrn	104265	104349	.	-	.	Parent=CGI_10005462;
	scaffold41722	TRF	Tandem_Repeat	104265	104349	65	+	.	.
scaffold41722	subtractBed	intrn	104336	104538	.	-	.	Parent=CGI_10005462;
	scaffold41722	TRF	Tandem_Repeat	104336	104538	214	+	.	.
scaffold41722	subtractBed	intrn	110572	110791	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	110572	110791	129	+	.	.
scaffold41722	subtractBed	intrn	111144	111326	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	111144	111326	223	+	.	.
scaffold41722	subtractBed	intrn	111302	111589	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	111302	111589	344	+	.	.
scaffold41722	subtractBed	intrn	111302	111589	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	111302	111589	346	+	.	.
scaffold41722	subtractBed	intrn	115129	115381	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	115129	115381	310	+	.	.
scaffold41722	subtractBed	intrn	114581	115091	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	114581	115091	568	+	.	.
scaffold41722	subtractBed	intrn	114581	115384	.	+	.	Parent=CGI_10005463;
	scaffold41722	TRF	Tandem_Repeat	114581	115384	735	+	.	.
scaffold41730	subtractBed	intrn	7172	7448	.	+	.	Parent=CGI_10005525;
	scaffold41730	TRF	Tandem_Repeat	7130	7448	446	+	.	.
scaffold41730	subtractBed	intrn	8789	8879	.	+	.	Parent=CGI_10005525;
	scaffold41730	TRF	Tandem_Repeat	8789	8879	78	+	.	.
scaffold41730	subtractBed	intrn	8741	8879	.	+	.	Parent=CGI_10005525;
	scaffold41730	TRF	Tandem_Repeat	8741	8879	100	+	.	.
scaffold41730	subtractBed	intrn	10962	10993	.	+	.	Parent=CGI_10005525;
	scaffold41730	TRF	Tandem_Repeat	10962	10993	50	+	.	.
scaffold41730	subtractBed	intrn	89490	89535	.	-	.	Parent=CGI_10005529;
	scaffold41730	TRF	Tandem_Repeat	89490	89535	83	+	.	.
scaffold41730	subtractBed	intrn	91028	91708	.	-	.	Parent=CGI_10005529;
	scaffold41730	TRF	Tandem_Repeat	91028	91708	724	+	.	.
scaffold41730	subtractBed	intrn	95720	95756	.	-	.	Parent=CGI_10005529;
	scaffold41730	TRF	Tandem_Repeat	95720	95756	74	+	.	.
scaffold41730	subtractBed	intrn	103402	103468	.	-	.	Parent=CGI_10005529;
	scaffold41730	TRF	Tandem_Repeat	103402	103468	134	+	.	.
scaffold41730	subtractBed	intrn	104526	104550	.	-	.	Parent=CGI_10005530;
	scaffold41730	TRF	Tandem_Repeat	104526	104550	50	+	.	.
scaffold41730	subtractBed	intrn	104253	104311	.	-	.	Parent=CGI_10005530;
	scaffold41730	WUBlastX	LINE_L2	104186	104311	27	-	.	.
scaffold41730	subtractBed	intrn	104283	104522	.	-	.	Parent=CGI_10005530;
	scaffold41730	WUBlastX	LINE_L2	104283	104522	36	-	.	.
scaffold41730	subtractBed	intrn	115227	115748	.	+	.	Parent=CGI_10005531;
	scaffold41730	WUBlastX	DNA_Zator	115227	115748	72	-	.	.
scaffold41730	subtractBed	intrn	120692	121489	.	+	.	Parent=CGI_10005531;
	scaffold41730	TRF	Tandem_Repeat	120692	121489	1274	+	.	.
scaffold41732	subtractBed	intrn	16726	16754	.	+	.	Parent=CGI_10005477;
	scaffold41732	TRF	Tandem_Repeat	16726	16754	58	+	.	.
scaffold41732	subtractBed	intrn	46045	46136	.	-	.	Parent=CGI_10005478;
	scaffold41732	TRF	Tandem_Repeat	46045	46136	76	+	.	.
scaffold41732	subtractBed	intrn	46078	46238	.	-	.	Parent=CGI_10005478;
	scaffold41732	TRF	Tandem_Repeat	46078	46238	90	+	.	.
scaffold41732	subtractBed	intrn	46041	46241	.	-	.	Parent=CGI_10005478;
	scaffold41732	TRF	Tandem_Repeat	46041	46241	136	+	.	.
scaffold41732	subtractBed	intrn	47628	47800	.	-	.	Parent=CGI_10005478;
	scaffold41732	TRF	Tandem_Repeat	47628	47800	197	+	.	.
scaffold41732	subtractBed	intrn	57906	58424	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_RTE-X	57906	58424	303	-	.	.
scaffold41732	subtractBed	intrn	59573	59674	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_L1-Tx1	59573	59674	22	-	.	.
scaffold41732	subtractBed	intrn	57329	57901	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_RTE-X	57329	57901	169	-	.	.
scaffold41732	subtractBed	intrn	58448	58996	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_RTE-X	58448	58996	350	-	.	.
scaffold41732	subtractBed	intrn	59588	59659	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_Rex-Babar	59588	59659	26	-	.	.
scaffold41732	subtractBed	intrn	58448	59113	.	-	.	Parent=CGI_10005478;
	scaffold41732	WUBlastX	LINE_L2	58448	59113	56	-	.	.
scaffold41732	subtractBed	intrn	87885	88159	.	+	.	Parent=CGI_10005483;
	scaffold41732	TRF	Tandem_Repeat	87885	88159	246	+	.	.
scaffold41732	subtractBed	intrn	87885	88159	.	+	.	Parent=CGI_10005483;
	scaffold41732	TRF	Tandem_Repeat	87885	88159	361	+	.	.
scaffold41732	subtractBed	intrn	100782	100841	.	-	.	Parent=CGI_10005484;
	scaffold41732	TRF	Tandem_Repeat	100782	100841	120	+	.	.
scaffold41740	subtractBed	intrn	65114	65166	.	-	.	Parent=CGI_10005585;
	scaffold41740	TRF	Tandem_Repeat	65114	65166	106	+	.	.
scaffold41740	subtractBed	intrn	73923	75170	.	-	.	Parent=CGI_10005585;
	scaffold41740	TRF	Tandem_Repeat	73923	75170	1815	+	.	.
scaffold41740	subtractBed	intrn	76493	76546	.	-	.	Parent=CGI_10005585;
	scaffold41740	TRF	Tandem_Repeat	76493	76546	74	+	.	.
scaffold41740	subtractBed	intrn	122717	122881	.	+	.	Parent=CGI_10005588;
	scaffold41740	TRF	Tandem_Repeat	122717	122881	213	+	.	.
scaffold41754	subtractBed	intrn	20617	20683	.	-	.	Parent=CGI_10005557;
	scaffold41754	TRF	Tandem_Repeat	20617	20683	62	+	.	.
scaffold41754	subtractBed	intrn	45894	45925	.	-	.	Parent=CGI_10005557;
	scaffold41754	TRF	Tandem_Repeat	45894	45925	64	+	.	.
scaffold41754	subtractBed	intrn	70049	70134	.	-	.	Parent=CGI_10005557;
	scaffold41754	TRF	Tandem_Repeat	70049	70134	129	+	.	.
scaffold41754	subtractBed	intrn	88147	88206	.	-	.	Parent=CGI_10005558;
	scaffold41754	TRF	Tandem_Repeat	88147	88206	93	+	.	.
scaffold41754	subtractBed	intrn	88595	88744	.	-	.	Parent=CGI_10005558;
	scaffold41754	WUBlastX	LINE_RTE-X	88595	88744	37	+	.	.
scaffold41754	subtractBed	intrn	88815	89123	.	-	.	Parent=CGI_10005558;
	scaffold41754	WUBlastX	LINE_RTE-X	88815	89123	67	+	.	.
scaffold41754	subtractBed	intrn	89090	89308	.	-	.	Parent=CGI_10005558;
	scaffold41754	WUBlastX	LINE_RTE-X	89090	89308	30	+	.	.
scaffold41754	subtractBed	intrn	88595	88810	.	-	.	Parent=CGI_10005558;
	scaffold41754	WUBlastX	LINE_RTE-X	88595	88810	29	+	.	.
scaffold41754	subtractBed	intrn	120777	120839	.	-	.	Parent=CGI_10005563;
	scaffold41754	TRF	Tandem_Repeat	120777	120839	119	+	.	.
scaffold41762	subtractBed	intrn	4508	4558	.	+	.	Parent=CGI_10005607;
	scaffold41762	TRF	Tandem_Repeat	4508	4558	66	+	.	.
scaffold41766	subtractBed	intrn	32206	32490	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	32206	32490	69	-	.	.
scaffold41766	subtractBed	intrn	31418	31501	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	31418	31501	21	-	.	.
scaffold41766	subtractBed	intrn	32174	32359	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	32174	32359	61	-	.	.
scaffold41766	subtractBed	intrn	32263	32484	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	32263	32484	93	-	.	.
scaffold41766	subtractBed	intrn	32111	32359	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	32111	32359	36	-	.	.
scaffold41766	subtractBed	intrn	32362	32613	.	-	.	Parent=CGI_10005601;
	scaffold41766	WUBlastX	LTR_Gypsy	32362	32613	56	-	.	.
scaffold41766	subtractBed	intrn	37857	37910	.	+	.	Parent=CGI_10005602;
	scaffold41766	TRF	Tandem_Repeat	37857	37910	101	+	.	.
scaffold41766	subtractBed	intrn	47816	47861	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	47816	47861	74	+	.	.
scaffold41766	subtractBed	intrn	47952	47995	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	47952	47995	88	+	.	.
scaffold41766	subtractBed	intrn	48379	48412	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	48379	48412	59	+	.	.
scaffold41766	subtractBed	intrn	49116	49166	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	49116	49166	102	+	.	.
scaffold41766	subtractBed	intrn	55448	55521	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	55448	55521	148	+	.	.
scaffold41766	subtractBed	intrn	57679	57715	.	+	.	Parent=CGI_10005603;
	scaffold41766	TRF	Tandem_Repeat	57679	57715	74	+	.	.
scaffold41776	subtractBed	intrn	129612	129641	.	-	.	Parent=CGI_10005631;
	scaffold41776	TRF	Tandem_Repeat	129612	129641	60	+	.	.
scaffold41786	subtractBed	intrn	82624	82670	.	-	.	Parent=CGI_10005624;
	scaffold41786	TRF	Tandem_Repeat	82624	82670	94	+	.	.
scaffold41786	subtractBed	intrn	90336	90377	.	-	.	Parent=CGI_10005624;
	scaffold41786	TRF	Tandem_Repeat	90336	90377	84	+	.	.
scaffold41786	subtractBed	intrn	95273	95317	.	-	.	Parent=CGI_10005624;
	scaffold41786	TRF	Tandem_Repeat	95273	95317	90	+	.	.
scaffold41786	subtractBed	intrn	99335	99822	.	+	.	Parent=CGI_10005625;
	scaffold41786	TRF	Tandem_Repeat	99335	99822	832	+	.	.
scaffold41786	subtractBed	intrn	110005	110316	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	110005	110316	144	+	.	.
scaffold41786	subtractBed	intrn	109348	109917	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT	109348	109917	161	+	.	.
scaffold41786	subtractBed	intrn	109103	109458	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	109057	109458	22	+	.	.
scaffold41786	subtractBed	intrn	109138	109902	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	109138	109902	93	+	.	.
scaffold41786	subtractBed	intrn	111514	111771	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	111514	111771	42	+	.	.
scaffold41786	subtractBed	intrn	111550	111768	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	111550	111768	59	+	.	.
scaffold41786	subtractBed	intrn	111589	111762	.	+	.	Parent=CGI_10005626;
	scaffold41786	WUBlastX	DNA_hAT-Tip100	111589	111762	61	+	.	.
scaffold41798	subtractBed	intrn	114829	114851	.	-	.	Parent=CGI_10005657;
	scaffold41798	WUBlastX	DNA_Kolobok	114684	114851	87	-	.	.
scaffold41806	subtractBed	intrn	1466	1795	.	-	.	Parent=CGI_10005641;
	scaffold41806	WUBlastX	LINE_RTE-X	1466	1795	52	+	.	.
scaffold41806	subtractBed	intrn	1478	1738	.	-	.	Parent=CGI_10005641;
	scaffold41806	WUBlastX	LINE_RTE-X	1478	1738	52	+	.	.
scaffold41806	subtractBed	intrn	81254	81303	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	81254	81303	93	+	.	.
scaffold41806	subtractBed	intrn	84708	85075	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	84708	85075	92	+	.	.
scaffold41806	subtractBed	intrn	84812	84880	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	84812	84880	52	+	.	.
scaffold41806	subtractBed	intrn	84782	85005	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	84782	85005	79	+	.	.
scaffold41806	subtractBed	intrn	84811	84884	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	84811	84884	60	+	.	.
scaffold41806	subtractBed	intrn	84747	85132	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	84747	85132	115	+	.	.
scaffold41806	subtractBed	intrn	85428	86201	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	85428	86201	1047	+	.	.
scaffold41806	subtractBed	intrn	86313	86356	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	86313	86356	88	+	.	.
scaffold41806	subtractBed	intrn	91690	92444	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	91690	92444	939	+	.	.
scaffold41806	subtractBed	intrn	92459	92489	.	-	.	Parent=CGI_10005645;
	scaffold41806	TRF	Tandem_Repeat	92459	92489	62	+	.	.
scaffold41816	subtractBed	intrn	10519	10562	.	-	.	Parent=CGI_10005647;
	scaffold41816	TRF	Tandem_Repeat	10519	10562	79	+	.	.
scaffold41816	subtractBed	intrn	25040	25270	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	25040	25270	65	-	.	.
scaffold41816	subtractBed	intrn	24223	24567	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	24223	24567	119	-	.	.
scaffold41816	subtractBed	intrn	24995	25210	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	24995	25210	50	-	.	.
scaffold41816	subtractBed	intrn	25246	25353	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	25246	25353	23	-	.	.
scaffold41816	subtractBed	intrn	25070	25231	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	25070	25231	68	-	.	.
scaffold41816	subtractBed	intrn	25377	25496	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	25377	25496	27	-	.	.
scaffold41816	subtractBed	intrn	23906	24235	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	23906	24235	111	-	.	.
scaffold41816	subtractBed	intrn	20415	20687	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	DNA_Academ	20415	20687	63	+	.	.
scaffold41816	subtractBed	intrn	25246	25332	.	-	.	Parent=CGI_10005647;
	scaffold41816	WUBlastX	LTR_Ngaro	25246	25332	24	-	.	.
scaffold41816	subtractBed	intrn	85874	86014	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	85874	86014	38	-	.	.
scaffold41816	subtractBed	intrn	88537	88686	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_L1	88537	88686	101	-	.	.
scaffold41816	subtractBed	intrn	85953	86408	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	85953	86408	185	-	.	.
scaffold41816	subtractBed	intrn	87591	88391	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	87591	88391	150	-	.	.
scaffold41816	subtractBed	intrn	86411	86608	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	86411	86608	98	-	.	.
scaffold41816	subtractBed	intrn	86960	87229	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	86960	87229	25	-	.	.
scaffold41816	subtractBed	intrn	85301	85873	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	85301	85873	74	-	.	.
scaffold41816	subtractBed	intrn	86966	87373	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	86966	87373	21	-	.	.
scaffold41816	subtractBed	intrn	88683	89183	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_L2	88683	89183	149	-	.	.
scaffold41816	subtractBed	intrn	86557	86922	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-X	86557	86922	154	-	.	.
scaffold41816	subtractBed	intrn	86569	86988	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_RTE-BovB	86569	86988	29	-	.	.
scaffold41816	subtractBed	intrn	87116	87289	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_CR1	87116	87289	26	-	.	.
scaffold41816	subtractBed	intrn	88710	89267	.	+	.	Parent=CGI_10005649;
	scaffold41816	WUBlastX	LINE_L1	88710	89267	75	-	.	.
scaffold41816	subtractBed	intrn	95357	95453	.	-	.	Parent=CGI_10005650;
	scaffold41816	TRF	Tandem_Repeat	95357	95453	149	+	.	.
scaffold41816	subtractBed	intrn	95492	96805	.	-	.	Parent=CGI_10005650;
	scaffold41816	TRF	Tandem_Repeat	95492	96805	1449	+	.	.
scaffold41816	subtractBed	intrn	95511	96788	.	-	.	Parent=CGI_10005650;
	scaffold41816	TRF	Tandem_Repeat	95511	96788	1631	+	.	.
scaffold41824	subtractBed	intrn	31460	31499	.	-	.	Parent=CGI_10005708;
	scaffold41824	TRF	Tandem_Repeat	31460	31499	80	+	.	.
scaffold41824	subtractBed	intrn	37970	38104	.	-	.	Parent=CGI_10005708;
	scaffold41824	TRF	Tandem_Repeat	37970	38104	67	+	.	.
scaffold41824	subtractBed	intrn	38021	38114	.	-	.	Parent=CGI_10005708;
	scaffold41824	TRF	Tandem_Repeat	38021	38114	91	+	.	.
scaffold41824	subtractBed	intrn	94372	94420	.	-	.	Parent=CGI_10005710;
	scaffold41824	TRF	Tandem_Repeat	94372	94420	98	+	.	.
scaffold41828	subtractBed	intrn	19041	19074	.	-	.	Parent=CGI_10005672;
	scaffold41828	TRF	Tandem_Repeat	19041	19074	68	+	.	.
scaffold41828	subtractBed	intrn	20080	21039	.	-	.	Parent=CGI_10005672;
	scaffold41828	WUBlastX	LINE_RTE-X	20080	21039	292	-	.	.
scaffold41828	subtractBed	intrn	61720	61922	.	-	.	Parent=CGI_10005674;
	scaffold41828	TRF	Tandem_Repeat	61720	61922	258	+	.	.
scaffold41828	subtractBed	intrn	65527	65644	.	-	.	Parent=CGI_10005674;
	scaffold41828	TRF	Tandem_Repeat	65527	65644	162	+	.	.
scaffold41828	subtractBed	intrn	69805	69852	.	-	.	Parent=CGI_10005674;
	scaffold41828	TRF	Tandem_Repeat	69805	69852	96	+	.	.
scaffold41828	subtractBed	intrn	70973	71447	.	-	.	Parent=CGI_10005674;
	scaffold41828	TRF	Tandem_Repeat	70973	71447	496	+	.	.
scaffold41828	subtractBed	intrn	78322	78387	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	78322	78387	80	+	.	.
scaffold41828	subtractBed	intrn	86678	86713	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	86678	86713	65	+	.	.
scaffold41828	subtractBed	intrn	86824	86863	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	86824	86863	53	+	.	.
scaffold41828	subtractBed	intrn	87036	89535	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	87036	89535	2571	+	.	.
scaffold41828	subtractBed	intrn	87044	89507	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	87044	89507	2990	+	.	.
scaffold41828	subtractBed	intrn	87037	89535	.	+	.	Parent=CGI_10005676;
	scaffold41828	TRF	Tandem_Repeat	87037	89535	2668	+	.	.
scaffold41828	subtractBed	intrn	131449	131563	.	+	.	Parent=CGI_10005680;
	scaffold41828	TRF	Tandem_Repeat	131449	131563	131	+	.	.
scaffold41834	subtractBed	intrn	49990	51777	.	+	.	Parent=CGI_10005704;
	scaffold41834	WUBlastX	DNA_P	49990	51777	158	-	.	.
scaffold41834	subtractBed	intrn	50050	51366	.	+	.	Parent=CGI_10005704;
	scaffold41834	WUBlastX	DNA_P	50050	51366	225	-	.	.
scaffold41834	subtractBed	intrn	75469	75486	.	+	.	Parent=CGI_10005705;
	scaffold41834	WUBlastX	LINE_CR1	75469	75681	27	+	.	.
scaffold41852	subtractBed	intrn	32953	32987	.	+	.	Parent=CGI_10005729;
	scaffold41852	TRF	Tandem_Repeat	32953	32987	70	+	.	.
scaffold41852	subtractBed	intrn	39765	39814	.	+	.	Parent=CGI_10005729;
	scaffold41852	TRF	Tandem_Repeat	39765	39814	57	+	.	.
scaffold41852	subtractBed	intrn	67764	67830	.	-	.	Parent=CGI_10005731;
	scaffold41852	TRF	Tandem_Repeat	67764	67830	125	+	.	.
scaffold41852	subtractBed	intrn	74361	74396	.	-	.	Parent=CGI_10005731;
	scaffold41852	TRF	Tandem_Repeat	74361	74396	72	+	.	.
scaffold41852	subtractBed	intrn	81941	81980	.	-	.	Parent=CGI_10005731;
	scaffold41852	TRF	Tandem_Repeat	81941	81980	73	+	.	.
scaffold41852	subtractBed	intrn	109091	109294	.	+	.	Parent=CGI_10005735;
	scaffold41852	WUBlastX	DNA_Harbinger	109091	109294	98	-	.	.
scaffold41852	subtractBed	intrn	109290	109565	.	+	.	Parent=CGI_10005735;
	scaffold41852	WUBlastX	DNA_Harbinger	109290	109565	179	-	.	.
scaffold41858	subtractBed	intrn	17094	17152	.	-	.	Parent=CGI_10005759;
	scaffold41858	TRF	Tandem_Repeat	17094	17152	109	+	.	.
scaffold41858	subtractBed	intrn	20142	20200	.	-	.	Parent=CGI_10005760;
	scaffold41858	TRF	Tandem_Repeat	20142	20200	118	+	.	.
scaffold41858	subtractBed	intrn	39073	39206	.	+	.	Parent=CGI_10005763;
	scaffold41858	TRF	Tandem_Repeat	39073	39206	155	+	.	.
scaffold41858	subtractBed	intrn	62450	62527	.	-	.	Parent=CGI_10005765;
	scaffold41858	TRF	Tandem_Repeat	62450	62527	156	+	.	.
scaffold41858	subtractBed	intrn	88214	88282	.	-	.	Parent=CGI_10005768;
	scaffold41858	TRF	Tandem_Repeat	88214	88282	129	+	.	.
scaffold41858	subtractBed	intrn	90875	91222	.	-	.	Parent=CGI_10005768;
	scaffold41858	WUBlastX	DNA_TcMar-Tc1	90875	91222	119	+	.	.
scaffold41858	subtractBed	intrn	90935	91213	.	-	.	Parent=CGI_10005768;
	scaffold41858	WUBlastX	DNA_TcMar-Tc1	90935	91213	131	+	.	.
scaffold41858	subtractBed	intrn	101233	101808	.	+	.	Parent=CGI_10005769;
	scaffold41858	TRF	Tandem_Repeat	101233	101808	1073	+	.	.
scaffold41858	subtractBed	intrn	112790	112833	.	+	.	Parent=CGI_10005770;
	scaffold41858	TRF	Tandem_Repeat	112790	112833	61	+	.	.
scaffold41858	subtractBed	intrn	113915	113972	.	+	.	Parent=CGI_10005770;
	scaffold41858	TRF	Tandem_Repeat	113915	113972	116	+	.	.
scaffold41858	subtractBed	intrn	108923	110920	.	+	.	Parent=CGI_10005770;
	scaffold41858	WUBlastX	LINE_RTE-X	108923	110920	761	+	.	.
scaffold41858	subtractBed	intrn	108590	110326	.	+	.	Parent=CGI_10005770;
	scaffold41858	WUBlastX	LINE_CR1	108590	110326	206	+	.	.
scaffold41858	subtractBed	intrn	110345	111106	.	+	.	Parent=CGI_10005770;
	scaffold41858	WUBlastX	LINE_RTE-X	110345	111106	147	+	.	.
scaffold41858	subtractBed	intrn	120907	121161	.	+	.	Parent=CGI_10005770;
	scaffold41858	TRF	Tandem_Repeat	120887	121161	288	+	.	.
scaffold41884	subtractBed	intrn	39191	39244	.	+	.	Parent=CGI_10005779;
	scaffold41884	TRF	Tandem_Repeat	39191	39244	108	+	.	.
scaffold41884	subtractBed	intrn	52282	52790	.	+	.	Parent=CGI_10005780;
	scaffold41884	TRF	Tandem_Repeat	52282	52790	790	+	.	.
scaffold41884	subtractBed	intrn	51652	52116	.	+	.	Parent=CGI_10005780;
	scaffold41884	WUBlastX	RC_Helitron	51652	52116	81	+	.	.
scaffold41884	subtractBed	intrn	56837	56887	.	+	.	Parent=CGI_10005780;
	scaffold41884	TRF	Tandem_Repeat	56837	56887	102	+	.	.
scaffold41884	subtractBed	intrn	59355	59441	.	+	.	Parent=CGI_10005780;
	scaffold41884	TRF	Tandem_Repeat	59355	59441	174	+	.	.
scaffold41884	subtractBed	intrn	57949	58347	.	+	.	Parent=CGI_10005780;
	scaffold41884	WUBlastX	LINE_RTE-X	57949	58347	125	+	.	.
scaffold41884	subtractBed	intrn	57940	58461	.	+	.	Parent=CGI_10005780;
	scaffold41884	WUBlastX	LINE_RTE-X	57940	58461	111	+	.	.
scaffold41896	subtractBed	intrn	8836	8899	.	-	.	Parent=CGI_10005801;
	scaffold41896	TRF	Tandem_Repeat	8836	8899	96	+	.	.
scaffold41896	subtractBed	intrn	52896	52923	.	+	.	Parent=CGI_10005806;
	scaffold41896	TRF	Tandem_Repeat	52896	52923	56	+	.	.
scaffold41896	subtractBed	intrn	81265	81570	.	-	.	Parent=CGI_10005809;
	scaffold41896	TRF	Tandem_Repeat	81265	81594	552	+	.	.
scaffold41896	subtractBed	intrn	81847	81887	.	-	.	Parent=CGI_10005809;
	scaffold41896	TRF	Tandem_Repeat	81847	81887	82	+	.	.
scaffold41896	subtractBed	intrn	91889	91927	.	+	.	Parent=CGI_10005811;
	scaffold41896	TRF	Tandem_Repeat	91889	91927	78	+	.	.
scaffold41896	subtractBed	intrn	93851	93894	.	+	.	Parent=CGI_10005811;
	scaffold41896	TRF	Tandem_Repeat	93851	93894	88	+	.	.
scaffold41896	subtractBed	intrn	96760	96794	.	+	.	Parent=CGI_10005811;
	scaffold41896	TRF	Tandem_Repeat	96760	96794	70	+	.	.
scaffold41898	subtractBed	intrn	98538	98945	.	-	.	Parent=CGI_10005832;
	scaffold41898	WUBlastX	LTR_Gypsy	98452	99522	230	-	.	.
scaffold41898	subtractBed	intrn	98848	98945	.	-	.	Parent=CGI_10005832;
	scaffold41898	WUBlastX	LTR_Gypsy	98848	99549	243	-	.	.
scaffold41898	subtractBed	intrn	98538	98646	.	-	.	Parent=CGI_10005832;
	scaffold41898	WUBlastX	LTR_Gypsy	98395	98646	23	-	.	.
scaffold419	subtractBed	intrn	39605	39943	.	+	.	Parent=CGI_10028318;
	scaffold419	WUBlastX	DNA_PiggyBac	39605	39943	113	+	.	.
scaffold419	subtractBed	intrn	39656	39910	.	+	.	Parent=CGI_10028318;
	scaffold419	WUBlastX	DNA_PiggyBac	39656	39910	129	+	.	.
scaffold419	subtractBed	intrn	39924	39983	.	+	.	Parent=CGI_10028318;
	scaffold419	WUBlastX	DNA_PiggyBac	39924	39983	39	+	.	.
scaffold419	subtractBed	intrn	47959	48150	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_CR1	47959	48150	86	-	.	.
scaffold419	subtractBed	intrn	47281	47496	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_RTE-X	47281	47496	26	-	.	.
scaffold419	subtractBed	intrn	47709	48578	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_RTE-X	47709	48578	84	-	.	.
scaffold419	subtractBed	intrn	47463	48578	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_RTE-X	47463	48578	81	-	.	.
scaffold419	subtractBed	intrn	48237	48638	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_I	48237	48638	85	-	.	.
scaffold419	subtractBed	intrn	48228	48491	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_Jockey	48228	48491	96	-	.	.
scaffold419	subtractBed	intrn	48623	49672	.	+	.	Parent=CGI_10028319;
	scaffold419	WUBlastX	LINE_Proto2	48623	49672	96	-	.	.
scaffold419	subtractBed	intrn	91741	91773	.	-	.	Parent=CGI_10028320;
	scaffold419	TRF	Tandem_Repeat	91741	91773	66	+	.	.
scaffold419	subtractBed	intrn	191231	191386	.	-	.	Parent=CGI_10028330;
	scaffold419	WUBlastX	DNA_IS4EU	191231	191386	107	-	.	.
scaffold419	subtractBed	intrn	191225	191432	.	-	.	Parent=CGI_10028330;
	scaffold419	WUBlastX	DNA_IS4EU	191225	191440	54	-	.	.
scaffold419	subtractBed	intrn	209450	209480	.	+	.	Parent=CGI_10028333;
	scaffold419	TRF	Tandem_Repeat	209450	209480	53	+	.	.
scaffold419	subtractBed	intrn	209450	209480	.	-	.	Parent=CGI_10028334;
	scaffold419	TRF	Tandem_Repeat	209450	209480	53	+	.	.
scaffold419	subtractBed	intrn	220600	220807	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	220600	220807	156	+	.	.
scaffold419	subtractBed	intrn	220621	220807	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	220621	220807	203	+	.	.
scaffold419	subtractBed	intrn	220807	221048	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	220807	221048	216	+	.	.
scaffold419	subtractBed	intrn	221122	221208	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	221122	221208	122	+	.	.
scaffold419	subtractBed	intrn	222521	222552	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	222521	222552	55	+	.	.
scaffold419	subtractBed	intrn	223983	224036	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	223983	224036	108	+	.	.
scaffold419	subtractBed	intrn	230790	231000	.	-	.	Parent=CGI_10028335;
	scaffold419	TRF	Tandem_Repeat	230790	231000	248	+	.	.
scaffold419	subtractBed	intrn	252230	252511	.	-	.	Parent=CGI_10028337;
	scaffold419	WUBlastX	LINE_RTE-BovB	252230	252511	41	+	.	.
scaffold419	subtractBed	intrn	252230	252466	.	-	.	Parent=CGI_10028337;
	scaffold419	WUBlastX	LINE_RTE-BovB	252230	252466	157	+	.	.
scaffold419	subtractBed	intrn	251911	252153	.	-	.	Parent=CGI_10028337;
	scaffold419	WUBlastX	LINE_RTE-BovB	251911	252153	141	+	.	.
scaffold419	subtractBed	intrn	252170	252457	.	-	.	Parent=CGI_10028337;
	scaffold419	WUBlastX	LINE_RTE-BovB	252170	252457	45	+	.	.
scaffold419	subtractBed	intrn	310401	311230	.	+	.	Parent=CGI_10028339;
	scaffold419	TRF	Tandem_Repeat	310401	311230	1307	+	.	.
scaffold419	subtractBed	intrn	343101	343150	.	+	.	Parent=CGI_10028339;
	scaffold419	TRF	Tandem_Repeat	343101	343150	73	+	.	.
scaffold419	subtractBed	intrn	375789	375846	.	-	.	Parent=CGI_10028341;
	scaffold419	TRF	Tandem_Repeat	375789	375846	116	+	.	.
scaffold419	subtractBed	intrn	377662	377706	.	-	.	Parent=CGI_10028341;
	scaffold419	TRF	Tandem_Repeat	377662	377706	90	+	.	.
scaffold419	subtractBed	intrn	412169	412208	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	412169	412208	80	+	.	.
scaffold419	subtractBed	intrn	417774	417907	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	417774	417907	117	+	.	.
scaffold419	subtractBed	intrn	418099	418215	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	418099	418215	92	+	.	.
scaffold419	subtractBed	intrn	424083	424132	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	424083	424132	57	+	.	.
scaffold419	subtractBed	intrn	425244	426694	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	425244	426694	1319	+	.	.
scaffold419	subtractBed	intrn	432642	432671	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	432642	432671	60	+	.	.
scaffold419	subtractBed	intrn	432698	432729	.	+	.	Parent=CGI_10028342;
	scaffold419	TRF	Tandem_Repeat	432698	432729	64	+	.	.
scaffold419	subtractBed	intrn	450680	450843	.	-	.	Parent=CGI_10028344;
	scaffold419	TRF	Tandem_Repeat	450680	450843	222	+	.	.
scaffold419	subtractBed	intrn	456853	457104	.	+	.	Parent=CGI_10028345;
	scaffold419	TRF	Tandem_Repeat	456813	457104	440	+	.	.
scaffold419	subtractBed	intrn	458350	458509	.	+	.	Parent=CGI_10028345;
	scaffold419	TRF	Tandem_Repeat	458350	458509	203	+	.	.
scaffold419	subtractBed	intrn	459734	459958	.	+	.	Parent=CGI_10028345;
	scaffold419	TRF	Tandem_Repeat	459734	459958	398	+	.	.
scaffold419	subtractBed	intrn	460107	460396	.	+	.	Parent=CGI_10028345;
	scaffold419	TRF	Tandem_Repeat	460107	460396	328	+	.	.
scaffold419	subtractBed	intrn	460112	460396	.	+	.	Parent=CGI_10028345;
	scaffold419	TRF	Tandem_Repeat	460112	460396	327	+	.	.
scaffold419	subtractBed	intrn	478425	478483	.	+	.	Parent=CGI_10028347;
	scaffold419	TRF	Tandem_Repeat	478425	478483	118	+	.	.
scaffold419	subtractBed	intrn	485701	485731	.	+	.	Parent=CGI_10028347;
	scaffold419	TRF	Tandem_Repeat	485701	485731	62	+	.	.
scaffold419	subtractBed	intrn	487957	488050	.	+	.	Parent=CGI_10028347;
	scaffold419	TRF	Tandem_Repeat	487957	488050	165	+	.	.
scaffold419	subtractBed	intrn	488504	488570	.	+	.	Parent=CGI_10028347;
	scaffold419	TRF	Tandem_Repeat	488504	488570	134	+	.	.
scaffold419	subtractBed	intrn	531923	531968	.	+	.	Parent=CGI_10028348;
	scaffold419	TRF	Tandem_Repeat	531923	531968	74	+	.	.
scaffold419	subtractBed	intrn	537543	537821	.	-	.	Parent=CGI_10028349;
	scaffold419	TRF	Tandem_Repeat	537543	537821	434	+	.	.
scaffold419	subtractBed	intrn	538129	538294	.	-	.	Parent=CGI_10028349;
	scaffold419	TRF	Tandem_Repeat	538129	538294	262	+	.	.
scaffold419	subtractBed	intrn	564033	564203	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	564033	564203	193	+	.	.
scaffold419	subtractBed	intrn	564200	564464	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	564200	564464	331	+	.	.
scaffold419	subtractBed	intrn	566945	567453	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	566945	567453	753	+	.	.
scaffold419	subtractBed	intrn	567825	567885	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	567825	567885	108	+	.	.
scaffold419	subtractBed	intrn	570525	571104	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	570525	571104	770	+	.	.
scaffold419	subtractBed	intrn	571107	571208	.	+	.	Parent=CGI_10028350;
	scaffold419	TRF	Tandem_Repeat	571107	571208	91	+	.	.
scaffold419	subtractBed	intrn	581870	581951	.	-	.	Parent=CGI_10028352;
	scaffold419	TRF	Tandem_Repeat	581870	581951	103	+	.	.
scaffold419	subtractBed	intrn	626221	626277	.	+	.	Parent=CGI_10028355;
	scaffold419	TRF	Tandem_Repeat	626221	626277	105	+	.	.
scaffold419	subtractBed	intrn	641291	642469	.	+	.	Parent=CGI_10028357;
	scaffold419	TRF	Tandem_Repeat	641291	642469	1432	+	.	.
scaffold419	subtractBed	intrn	676058	676580	.	-	.	Parent=CGI_10028358;
	scaffold419	TRF	Tandem_Repeat	676058	676580	843	+	.	.
scaffold419	subtractBed	intrn	679373	679482	.	-	.	Parent=CGI_10028358;
	scaffold419	TRF	Tandem_Repeat	679373	679482	112	+	.	.
scaffold419	subtractBed	intrn	680767	682356	.	-	.	Parent=CGI_10028358;
	scaffold419	WUBlastX	LTR_Gypsy	680767	682356	728	-	.	.
scaffold419	subtractBed	intrn	684526	684798	.	-	.	Parent=CGI_10028358;
	scaffold419	WUBlastX	LTR_Gypsy	684526	684798	56	-	.	.
scaffold419	subtractBed	intrn	680553	680651	.	-	.	Parent=CGI_10028358;
	scaffold419	WUBlastX	LTR_Copia	680553	680651	32	-	.	.
scaffold419	subtractBed	intrn	681034	684744	.	-	.	Parent=CGI_10028358;
	scaffold419	WUBlastX	LTR_Gypsy-Cigr	681034	684744	2539	-	.	.
scaffold419	subtractBed	intrn	684532	684873	.	-	.	Parent=CGI_10028358;
	scaffold419	WUBlastX	LTR_Gypsy	684532	684873	29	-	.	.
scaffold419	subtractBed	intrn	742570	742601	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	742570	742601	50	+	.	.
scaffold419	subtractBed	intrn	750423	750601	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	750423	750601	263	+	.	.
scaffold419	subtractBed	intrn	750461	750557	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	750461	750557	54	+	.	.
scaffold419	subtractBed	intrn	765117	765302	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	765117	765302	331	+	.	.
scaffold419	subtractBed	intrn	770085	770125	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	770085	770125	82	+	.	.
scaffold419	subtractBed	intrn	771335	771390	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	771335	771390	112	+	.	.
scaffold419	subtractBed	intrn	769977	770087	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	769977	770087	177	+	.	.
scaffold419	subtractBed	intrn	769981	770125	.	-	.	Parent=CGI_10028365;
	scaffold419	TRF	Tandem_Repeat	769981	770125	155	+	.	.
scaffold419	subtractBed	intrn	750423	750601	.	+	.	Parent=CGI_10028366;
	scaffold419	TRF	Tandem_Repeat	750423	750601	263	+	.	.
scaffold419	subtractBed	intrn	750461	750557	.	+	.	Parent=CGI_10028366;
	scaffold419	TRF	Tandem_Repeat	750461	750557	54	+	.	.
scaffold419	subtractBed	intrn	808307	808429	.	-	.	Parent=CGI_10028368;
	scaffold419	WUBlastX	LINE_RTE-X	808307	808429	36	+	.	.
scaffold419	subtractBed	intrn	807522	808292	.	-	.	Parent=CGI_10028368;
	scaffold419	WUBlastX	LINE_RTE-X	807522	808292	74	+	.	.
scaffold419	subtractBed	intrn	808182	808316	.	-	.	Parent=CGI_10028368;
	scaffold419	WUBlastX	LINE_RTE-X	808182	808316	45	+	.	.
scaffold419	subtractBed	intrn	807513	807827	.	-	.	Parent=CGI_10028368;
	scaffold419	WUBlastX	LINE_RTE-X	807513	807827	106	+	.	.
scaffold419	subtractBed	intrn	807488	807725	.	-	.	Parent=CGI_10028368;
	scaffold419	WUBlastX	LINE_RTE	807459	807725	37	+	.	.
scaffold419	subtractBed	intrn	815522	815599	.	+	.	Parent=CGI_10028369;
	scaffold419	TRF	Tandem_Repeat	815522	815599	147	+	.	.
scaffold419	subtractBed	intrn	817352	817378	.	+	.	Parent=CGI_10028369;
	scaffold419	TRF	Tandem_Repeat	817352	817378	54	+	.	.
scaffold419	subtractBed	intrn	894925	895255	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_hAT-Tip100	894899	895255	56	+	.	.
scaffold419	subtractBed	intrn	895794	896087	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	895794	896087	34	+	.	.
scaffold419	subtractBed	intrn	896075	896497	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	896075	896497	197	+	.	.
scaffold419	subtractBed	intrn	896641	896829	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	896641	896829	105	+	.	.
scaffold419	subtractBed	intrn	896952	897197	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	896952	897197	108	+	.	.
scaffold419	subtractBed	intrn	897278	897448	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	897278	897448	79	+	.	.
scaffold419	subtractBed	intrn	897556	897557	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_Kolobok	897556	897705	115	+	.	.
scaffold419	subtractBed	intrn	894925	895183	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_hAT-Tip100	894899	895183	86	+	.	.
scaffold419	subtractBed	intrn	894925	895069	.	+	.	Parent=CGI_10028373;
	scaffold419	WUBlastX	DNA_IS4EU	894743	895069	70	+	.	.
scaffold419	subtractBed	intrn	996243	996311	.	+	.	Parent=CGI_10028381;
	scaffold419	TRF	Tandem_Repeat	996243	996311	138	+	.	.
scaffold419	subtractBed	intrn	1077910	1077924	.	+	.	Parent=CGI_10028386;
	scaffold419	WUBlastX	LINE_L1-Tx1	1077910	1078035	21	+	.	.
scaffold419	subtractBed	intrn	1078623	1078751	.	+	.	Parent=CGI_10028386;
	scaffold419	WUBlastX	LINE_L1-Tx1	1078623	1078751	22	+	.	.
scaffold419	subtractBed	intrn	1078644	1080155	.	+	.	Parent=CGI_10028386;
	scaffold419	WUBlastX	LINE_L1-Tx1	1078644	1080155	381	+	.	.
scaffold419	subtractBed	intrn	1139932	1139977	.	+	.	Parent=CGI_10028387;
	scaffold419	TRF	Tandem_Repeat	1139932	1139977	92	+	.	.
scaffold419	subtractBed	intrn	1153505	1153546	.	+	.	Parent=CGI_10028389;
	scaffold419	TRF	Tandem_Repeat	1153505	1153546	84	+	.	.
scaffold419	subtractBed	intrn	1172390	1172461	.	-	.	Parent=CGI_10028390;
	scaffold419	TRF	Tandem_Repeat	1172390	1172461	121	+	.	.
scaffold419	subtractBed	intrn	1172615	1173320	.	-	.	Parent=CGI_10028390;
	scaffold419	TRF	Tandem_Repeat	1172615	1173320	1168	+	.	.
scaffold419	subtractBed	intrn	1178068	1178137	.	-	.	Parent=CGI_10028390;
	scaffold419	TRF	Tandem_Repeat	1178068	1178137	113	+	.	.
scaffold419	subtractBed	intrn	1174115	1174294	.	-	.	Parent=CGI_10028390;
	scaffold419	WUBlastX	LINE_RTE-X	1174115	1174294	112	-	.	.
scaffold419	subtractBed	intrn	1172390	1172461	.	+	.	Parent=CGI_10028391;
	scaffold419	TRF	Tandem_Repeat	1172390	1172461	121	+	.	.
scaffold419	subtractBed	intrn	1172615	1173320	.	+	.	Parent=CGI_10028391;
	scaffold419	TRF	Tandem_Repeat	1172615	1173320	1168	+	.	.
scaffold419	subtractBed	intrn	1178068	1178137	.	+	.	Parent=CGI_10028391;
	scaffold419	TRF	Tandem_Repeat	1178068	1178137	113	+	.	.
scaffold419	subtractBed	intrn	1174115	1174294	.	+	.	Parent=CGI_10028391;
	scaffold419	WUBlastX	LINE_RTE-X	1174115	1174294	112	-	.	.
scaffold419	subtractBed	intrn	1211336	1211380	.	+	.	Parent=CGI_10028395;
	scaffold419	TRF	Tandem_Repeat	1211336	1211380	90	+	.	.
scaffold419	subtractBed	intrn	1217427	1217480	.	+	.	Parent=CGI_10028395;
	scaffold419	TRF	Tandem_Repeat	1217427	1217480	108	+	.	.
scaffold419	subtractBed	intrn	1226416	1226451	.	+	.	Parent=CGI_10028395;
	scaffold419	TRF	Tandem_Repeat	1226416	1226451	65	+	.	.
scaffold419	subtractBed	intrn	1217427	1217480	.	-	.	Parent=CGI_10028396;
	scaffold419	TRF	Tandem_Repeat	1217427	1217480	108	+	.	.
scaffold419	subtractBed	intrn	1226416	1226451	.	-	.	Parent=CGI_10028396;
	scaffold419	TRF	Tandem_Repeat	1226416	1226451	65	+	.	.
scaffold419	subtractBed	intrn	1245996	1246042	.	+	.	Parent=CGI_10028398;
	scaffold419	TRF	Tandem_Repeat	1245996	1246042	94	+	.	.
scaffold419	subtractBed	intrn	1269409	1269588	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269409	1269588	76	-	.	.
scaffold419	subtractBed	intrn	1269988	1270137	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269988	1270137	64	-	.	.
scaffold419	subtractBed	intrn	1269985	1270104	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269985	1270104	94	-	.	.
scaffold419	subtractBed	intrn	1269810	1269941	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269810	1269941	22	-	.	.
scaffold419	subtractBed	intrn	1269979	1270245	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269979	1270245	60	-	.	.
scaffold419	subtractBed	intrn	1269822	1269932	.	+	.	Parent=CGI_10028402;
	scaffold419	WUBlastX	LINE_CR1	1269822	1269932	26	-	.	.
scaffold419	subtractBed	intrn	1277072	1277141	.	-	.	Parent=CGI_10028404;
	scaffold419	TRF	Tandem_Repeat	1277072	1277141	68	+	.	.
scaffold419	subtractBed	intrn	1285268	1285309	.	-	.	Parent=CGI_10028404;
	scaffold419	TRF	Tandem_Repeat	1285268	1285309	75	+	.	.
scaffold419	subtractBed	intrn	1277316	1278203	.	-	.	Parent=CGI_10028404;
	scaffold419	TRF	Tandem_Repeat	1277316	1278203	1117	+	.	.
scaffold419	subtractBed	intrn	1396998	1397783	.	-	.	Parent=CGI_10028407;
	scaffold419	TRF	Tandem_Repeat	1396998	1397783	1120	+	.	.
scaffold419	subtractBed	intrn	1413304	1413349	.	-	.	Parent=CGI_10028407;
	scaffold419	TRF	Tandem_Repeat	1413304	1413349	83	+	.	.
scaffold419	subtractBed	intrn	1413307	1413357	.	-	.	Parent=CGI_10028407;
	scaffold419	TRF	Tandem_Repeat	1413307	1413357	59	+	.	.
scaffold419	subtractBed	intrn	1497449	1497486	.	-	.	Parent=CGI_10028409;
	scaffold419	TRF	Tandem_Repeat	1497449	1497486	76	+	.	.
scaffold419	subtractBed	intrn	1534005	1534304	.	-	.	Parent=CGI_10028411;
	scaffold419	TRF	Tandem_Repeat	1534005	1534304	384	+	.	.
scaffold419	subtractBed	intrn	1536257	1536359	.	-	.	Parent=CGI_10028411;
	scaffold419	TRF	Tandem_Repeat	1536257	1536359	127	+	.	.
scaffold419	subtractBed	intrn	1536268	1536427	.	-	.	Parent=CGI_10028411;
	scaffold419	TRF	Tandem_Repeat	1536268	1536427	167	+	.	.
scaffold419	subtractBed	intrn	1536454	1536544	.	-	.	Parent=CGI_10028411;
	scaffold419	TRF	Tandem_Repeat	1536454	1536544	119	+	.	.
scaffold419	subtractBed	intrn	1536426	1536550	.	-	.	Parent=CGI_10028411;
	scaffold419	TRF	Tandem_Repeat	1536426	1536550	109	+	.	.
scaffold419	subtractBed	intrn	1565390	1565434	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1565390	1565434	90	+	.	.
scaffold419	subtractBed	intrn	1567784	1568023	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1567784	1568023	268	+	.	.
scaffold419	subtractBed	intrn	1570557	1570611	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1570557	1570611	110	+	.	.
scaffold419	subtractBed	intrn	1572023	1572068	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1572023	1572068	76	+	.	.
scaffold419	subtractBed	intrn	1572018	1572071	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1572018	1572071	76	+	.	.
scaffold419	subtractBed	intrn	1575484	1575547	.	+	.	Parent=CGI_10028412;
	scaffold419	TRF	Tandem_Repeat	1575484	1575547	128	+	.	.
scaffold419	subtractBed	intrn	1583349	1583402	.	+	.	Parent=CGI_10028413;
	scaffold419	TRF	Tandem_Repeat	1583349	1583402	108	+	.	.
scaffold419	subtractBed	intrn	1583750	1583807	.	+	.	Parent=CGI_10028413;
	scaffold419	TRF	Tandem_Repeat	1583750	1583807	116	+	.	.
scaffold419	subtractBed	intrn	1586198	1586253	.	+	.	Parent=CGI_10028413;
	scaffold419	TRF	Tandem_Repeat	1586198	1586253	112	+	.	.
scaffold419	subtractBed	intrn	1588995	1589129	.	+	.	Parent=CGI_10028413;
	scaffold419	TRF	Tandem_Repeat	1588995	1589129	209	+	.	.
scaffold419	subtractBed	intrn	1599015	1599069	.	+	.	Parent=CGI_10028413;
	scaffold419	TRF	Tandem_Repeat	1599015	1599069	110	+	.	.
scaffold419	subtractBed	intrn	1635813	1635851	.	-	.	Parent=CGI_10028414;
	scaffold419	TRF	Tandem_Repeat	1635813	1635851	78	+	.	.
scaffold419	subtractBed	intrn	1646247	1646323	.	-	.	Parent=CGI_10028414;
	scaffold419	TRF	Tandem_Repeat	1646247	1646323	122	+	.	.
scaffold419	subtractBed	intrn	1660601	1660653	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1660601	1660653	106	+	.	.
scaffold419	subtractBed	intrn	1663178	1663213	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1663178	1663213	72	+	.	.
scaffold419	subtractBed	intrn	1663222	1663319	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1663222	1663319	178	+	.	.
scaffold419	subtractBed	intrn	1665708	1665742	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1665708	1665742	52	+	.	.
scaffold419	subtractBed	intrn	1668593	1668644	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1668593	1668644	95	+	.	.
scaffold419	subtractBed	intrn	1672500	1672566	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1672500	1672566	134	+	.	.
scaffold419	subtractBed	intrn	1686338	1686402	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1686338	1686402	130	+	.	.
scaffold419	subtractBed	intrn	1688096	1688149	.	-	.	Parent=CGI_10028415;
	scaffold419	TRF	Tandem_Repeat	1688096	1688149	108	+	.	.
scaffold419	subtractBed	intrn	1672500	1672566	.	+	.	Parent=CGI_10028416;
	scaffold419	TRF	Tandem_Repeat	1672500	1672566	134	+	.	.
scaffold41900	subtractBed	intrn	35792	35841	.	-	.	Parent=CGI_10005815;
	scaffold41900	TRF	Tandem_Repeat	35792	35841	82	+	.	.
scaffold41900	subtractBed	intrn	102434	102597	.	-	.	Parent=CGI_10005818;
	scaffold41900	TRF	Tandem_Repeat	102434	102597	220	+	.	.
scaffold41902	subtractBed	intrn	52809	52864	.	-	.	Parent=CGI_10005826;
	scaffold41902	TRF	Tandem_Repeat	52809	52864	112	+	.	.
scaffold41902	subtractBed	intrn	85307	85888	.	+	.	Parent=CGI_10005827;
	scaffold41902	TRF	Tandem_Repeat	85307	85888	880	+	.	.
scaffold41902	subtractBed	intrn	90865	90930	.	+	.	Parent=CGI_10005827;
	scaffold41902	TRF	Tandem_Repeat	90865	90930	132	+	.	.
scaffold41902	subtractBed	intrn	102965	103238	.	-	.	Parent=CGI_10005828;
	scaffold41902	TRF	Tandem_Repeat	102965	103238	252	+	.	.
scaffold41902	subtractBed	intrn	102965	103238	.	-	.	Parent=CGI_10005828;
	scaffold41902	TRF	Tandem_Repeat	102965	103238	282	+	.	.
scaffold41902	subtractBed	intrn	120589	120738	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	120589	120738	219	+	.	.
scaffold41902	subtractBed	intrn	120589	120738	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	120589	120738	219	+	.	.
scaffold41902	subtractBed	intrn	120589	120738	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	120589	120738	219	+	.	.
scaffold41902	subtractBed	intrn	121220	121280	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	121220	121280	122	+	.	.
scaffold41902	subtractBed	intrn	125106	125163	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	125106	125163	116	+	.	.
scaffold41902	subtractBed	intrn	136471	136512	.	-	.	Parent=CGI_10005829;
	scaffold41902	TRF	Tandem_Repeat	136471	136512	68	+	.	.
scaffold41928	subtractBed	intrn	30980	31059	.	-	.	Parent=CGI_10005836;
	scaffold41928	TRF	Tandem_Repeat	30980	31059	133	+	.	.
scaffold41928	subtractBed	intrn	32433	32493	.	-	.	Parent=CGI_10005836;
	scaffold41928	TRF	Tandem_Repeat	32433	32493	122	+	.	.
scaffold41928	subtractBed	intrn	38825	38867	.	-	.	Parent=CGI_10005836;
	scaffold41928	TRF	Tandem_Repeat	38825	38867	86	+	.	.
scaffold41928	subtractBed	intrn	35796	36233	.	-	.	Parent=CGI_10005836;
	scaffold41928	WUBlastX	DNA_Zator	35796	36233	42	+	.	.
scaffold41928	subtractBed	intrn	35904	36134	.	-	.	Parent=CGI_10005836;
	scaffold41928	WUBlastX	DNA_Zator	35904	36134	58	+	.	.
scaffold41948	subtractBed	intrn	60865	60904	.	-	.	Parent=CGI_10005847;
	scaffold41948	TRF	Tandem_Repeat	60865	60904	80	+	.	.
scaffold41954	subtractBed	intrn	8432	8480	.	-	.	Parent=CGI_10005849;
	scaffold41954	TRF	Tandem_Repeat	8432	8480	53	+	.	.
scaffold41954	subtractBed	intrn	87346	87383	.	-	.	Parent=CGI_10005852;
	scaffold41954	TRF	Tandem_Repeat	87346	87383	76	+	.	.
scaffold41954	subtractBed	intrn	94599	94928	.	+	.	Parent=CGI_10005853;
	scaffold41954	TRF	Tandem_Repeat	94599	94928	412	+	.	.
scaffold41954	subtractBed	intrn	95252	95398	.	+	.	Parent=CGI_10005853;
	scaffold41954	TRF	Tandem_Repeat	95252	95398	249	+	.	.
scaffold41954	subtractBed	intrn	95490	95611	.	+	.	Parent=CGI_10005853;
	scaffold41954	TRF	Tandem_Repeat	95490	95611	118	+	.	.
scaffold41954	subtractBed	intrn	102991	103266	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1-Tx1	102991	103362	123	-	.	.
scaffold41954	subtractBed	intrn	102274	102354	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1-Tx1	102274	102354	37	-	.	.
scaffold41954	subtractBed	intrn	102339	102602	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1	102339	102602	57	-	.	.
scaffold41954	subtractBed	intrn	101975	102082	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1	101975	102082	25	-	.	.
scaffold41954	subtractBed	intrn	102339	102671	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1	102339	102671	42	-	.	.
scaffold41954	subtractBed	intrn	106054	106107	.	+	.	Parent=CGI_10005853;
	scaffold41954	TRF	Tandem_Repeat	106054	106107	108	+	.	.
scaffold41954	subtractBed	intrn	103382	103858	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1-Tx1	103382	103858	24	-	.	.
scaffold41954	subtractBed	intrn	103382	103759	.	+	.	Parent=CGI_10005853;
	scaffold41954	WUBlastX	LINE_L1-Tx1	103382	103759	139	-	.	.
scaffold41954	subtractBed	intrn	111281	111410	.	+	.	Parent=CGI_10005853;
	scaffold41954	TRF	Tandem_Repeat	111281	111410	242	+	.	.
scaffold41954	subtractBed	intrn	106054	106107	.	-	.	Parent=CGI_10005854;
	scaffold41954	TRF	Tandem_Repeat	106054	106107	108	+	.	.
scaffold41954	subtractBed	intrn	103382	103858	.	-	.	Parent=CGI_10005854;
	scaffold41954	WUBlastX	LINE_L1-Tx1	103382	103858	24	-	.	.
scaffold41954	subtractBed	intrn	103382	103759	.	-	.	Parent=CGI_10005854;
	scaffold41954	WUBlastX	LINE_L1-Tx1	103382	103759	139	-	.	.
scaffold41954	subtractBed	intrn	111281	111410	.	-	.	Parent=CGI_10005854;
	scaffold41954	TRF	Tandem_Repeat	111281	111410	242	+	.	.
scaffold41954	subtractBed	intrn	118100	118198	.	-	.	Parent=CGI_10005854;
	scaffold41954	TRF	Tandem_Repeat	118100	118198	53	+	.	.
scaffold41954	subtractBed	intrn	118109	118210	.	-	.	Parent=CGI_10005854;
	scaffold41954	TRF	Tandem_Repeat	118109	118210	75	+	.	.
scaffold41954	subtractBed	intrn	130243	130335	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130243	130335	34	-	.	.
scaffold41954	subtractBed	intrn	130353	130460	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130353	130460	48	-	.	.
scaffold41954	subtractBed	intrn	130201	130344	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130201	130344	30	-	.	.
scaffold41954	subtractBed	intrn	130350	130490	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130350	130490	25	-	.	.
scaffold41954	subtractBed	intrn	130568	131029	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130568	131029	80	-	.	.
scaffold41954	subtractBed	intrn	130736	130936	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	130736	130936	122	-	.	.
scaffold41954	subtractBed	intrn	136640	136685	.	+	.	Parent=CGI_10005855;
	scaffold41954	TRF	Tandem_Repeat	136640	136685	92	+	.	.
scaffold41954	subtractBed	intrn	131364	132887	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_RTE-X	131364	132887	583	-	.	.
scaffold41954	subtractBed	intrn	131187	133022	.	+	.	Parent=CGI_10005855;
	scaffold41954	WUBlastX	LINE_Rex-Babar	131187	133022	35	-	.	.
scaffold41968	subtractBed	intrn	13464	13926	.	+	.	Parent=CGI_10005864;
	scaffold41968	TRF	Tandem_Repeat	13464	13926	809	+	.	.
scaffold41968	subtractBed	intrn	93580	93612	.	+	.	Parent=CGI_10005870;
	scaffold41968	TRF	Tandem_Repeat	93580	93612	66	+	.	.
scaffold41968	subtractBed	intrn	107368	107463	.	+	.	Parent=CGI_10005872;
	scaffold41968	TRF	Tandem_Repeat	107368	107463	77	+	.	.
scaffold41968	subtractBed	intrn	125749	125811	.	-	.	Parent=CGI_10005874;
	scaffold41968	TRF	Tandem_Repeat	125749	125811	126	+	.	.
scaffold41968	subtractBed	intrn	129468	129535	.	-	.	Parent=CGI_10005874;
	scaffold41968	TRF	Tandem_Repeat	129468	129535	136	+	.	.
scaffold41970	subtractBed	intrn	4581	4634	.	+	.	Parent=CGI_10005881;
	scaffold41970	TRF	Tandem_Repeat	4581	4634	108	+	.	.
scaffold41970	subtractBed	intrn	4634	4720	.	+	.	Parent=CGI_10005881;
	scaffold41970	TRF	Tandem_Repeat	4634	4720	158	+	.	.
scaffold41970	subtractBed	intrn	33181	33318	.	-	.	Parent=CGI_10005882;
	scaffold41970	TRF	Tandem_Repeat	33181	33318	125	+	.	.
scaffold41970	subtractBed	intrn	37629	38153	.	-	.	Parent=CGI_10005882;
	scaffold41970	WUBlastX	LINE_L1-Tx1	37629	38153	143	-	.	.
scaffold41970	subtractBed	intrn	37863	38303	.	-	.	Parent=CGI_10005882;
	scaffold41970	WUBlastX	LINE_L1	37863	38303	51	-	.	.
scaffold41970	subtractBed	intrn	59190	59360	.	+	.	Parent=CGI_10005885;
	scaffold41970	TRF	Tandem_Repeat	59190	59360	333	+	.	.
scaffold41970	subtractBed	intrn	67574	67634	.	-	.	Parent=CGI_10005886;
	scaffold41970	TRF	Tandem_Repeat	67574	67634	97	+	.	.
scaffold41970	subtractBed	intrn	83400	83428	.	-	.	Parent=CGI_10005888;
	scaffold41970	TRF	Tandem_Repeat	83400	83428	58	+	.	.
scaffold41972	subtractBed	intrn	11006	11931	.	+	.	Parent=CGI_10005856;
	scaffold41972	TRF	Tandem_Repeat	11006	11931	1270	+	.	.
scaffold41972	subtractBed	intrn	28133	28198	.	+	.	Parent=CGI_10005857;
	scaffold41972	TRF	Tandem_Repeat	28133	28198	132	+	.	.
scaffold41972	subtractBed	intrn	28196	28227	.	+	.	Parent=CGI_10005857;
	scaffold41972	TRF	Tandem_Repeat	28196	28227	64	+	.	.
scaffold41972	subtractBed	intrn	34234	34678	.	+	.	Parent=CGI_10005858;
	scaffold41972	TRF	Tandem_Repeat	34234	34678	239	+	.	.
scaffold41972	subtractBed	intrn	80470	80562	.	+	.	Parent=CGI_10005860;
	scaffold41972	TRF	Tandem_Repeat	80470	80562	132	+	.	.
scaffold41972	subtractBed	intrn	85186	85228	.	+	.	Parent=CGI_10005860;
	scaffold41972	TRF	Tandem_Repeat	85186	85228	58	+	.	.
scaffold41972	subtractBed	intrn	97737	97892	.	-	.	Parent=CGI_10005861;
	scaffold41972	WUBlastX	LINE_L1	97737	97892	56	-	.	.
scaffold41972	subtractBed	intrn	97737	97892	.	+	.	Parent=CGI_10005862;
	scaffold41972	WUBlastX	LINE_L1	97737	97892	56	-	.	.
scaffold41972	subtractBed	intrn	107822	107932	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	107822	107932	170	+	.	.
scaffold41972	subtractBed	intrn	127259	127295	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	127259	127295	74	+	.	.
scaffold41972	subtractBed	intrn	127760	127825	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	127760	127825	109	+	.	.
scaffold41972	subtractBed	intrn	130105	130318	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	130105	130318	412	+	.	.
scaffold41972	subtractBed	intrn	131304	131986	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	131304	131986	909	+	.	.
scaffold41972	subtractBed	intrn	138230	138270	.	+	.	Parent=CGI_10005862;
	scaffold41972	TRF	Tandem_Repeat	138230	138270	82	+	.	.
scaffold41974	subtractBed	intrn	4978	5062	.	-	.	Parent=CGI_10005902;
	scaffold41974	TRF	Tandem_Repeat	4978	5062	152	+	.	.
scaffold41974	subtractBed	intrn	26164	26212	.	-	.	Parent=CGI_10005902;
	scaffold41974	TRF	Tandem_Repeat	26164	26212	89	+	.	.
scaffold41974	subtractBed	intrn	30787	30930	.	-	.	Parent=CGI_10005902;
	scaffold41974	WUBlastX	LINE_RTE-BovB	30787	30930	79	+	.	.
scaffold41974	subtractBed	intrn	30891	31721	.	-	.	Parent=CGI_10005902;
	scaffold41974	WUBlastX	LINE_RTE-BovB	30891	31721	72	+	.	.
scaffold41974	subtractBed	intrn	30903	31523	.	-	.	Parent=CGI_10005902;
	scaffold41974	WUBlastX	LINE_RTE-BovB	30903	31523	283	+	.	.
scaffold41974	subtractBed	intrn	49227	49259	.	+	.	Parent=CGI_10005903;
	scaffold41974	TRF	Tandem_Repeat	49227	49259	57	+	.	.
scaffold41974	subtractBed	intrn	55712	55766	.	+	.	Parent=CGI_10005903;
	scaffold41974	TRF	Tandem_Repeat	55712	55766	110	+	.	.
scaffold41974	subtractBed	intrn	83192	83255	.	+	.	Parent=CGI_10005904;
	scaffold41974	TRF	Tandem_Repeat	83192	83255	128	+	.	.
scaffold41974	subtractBed	intrn	88456	88511	.	+	.	Parent=CGI_10005904;
	scaffold41974	TRF	Tandem_Repeat	88456	88511	112	+	.	.
scaffold41974	subtractBed	intrn	89035	89088	.	+	.	Parent=CGI_10005904;
	scaffold41974	TRF	Tandem_Repeat	89035	89088	63	+	.	.
scaffold41974	subtractBed	intrn	95767	95820	.	+	.	Parent=CGI_10005906;
	scaffold41974	TRF	Tandem_Repeat	95767	95820	65	+	.	.
scaffold41974	subtractBed	intrn	97572	98467	.	+	.	Parent=CGI_10005906;
	scaffold41974	TRF	Tandem_Repeat	97572	98467	1031	+	.	.
scaffold41974	subtractBed	intrn	100578	100639	.	+	.	Parent=CGI_10005906;
	scaffold41974	TRF	Tandem_Repeat	100578	100639	124	+	.	.
scaffold41982	subtractBed	intrn	10259	10286	.	+	.	Parent=CGI_10005969;
	scaffold41982	TRF	Tandem_Repeat	10259	10286	56	+	.	.
scaffold41982	subtractBed	intrn	28712	28913	.	+	.	Parent=CGI_10005969;
	scaffold41982	TRF	Tandem_Repeat	28693	28913	193	+	.	.
scaffold41982	subtractBed	intrn	61533	62231	.	+	.	Parent=CGI_10005971;
	scaffold41982	TRF	Tandem_Repeat	61533	62231	439	+	.	.
scaffold41982	subtractBed	intrn	61525	62231	.	+	.	Parent=CGI_10005971;
	scaffold41982	TRF	Tandem_Repeat	61525	62231	484	+	.	.
scaffold41982	subtractBed	intrn	63794	63823	.	+	.	Parent=CGI_10005971;
	scaffold41982	TRF	Tandem_Repeat	63794	63823	51	+	.	.
scaffold41982	subtractBed	intrn	72054	72091	.	-	.	Parent=CGI_10005972;
	scaffold41982	TRF	Tandem_Repeat	72054	72091	76	+	.	.
scaffold41982	subtractBed	intrn	91501	91552	.	+	.	Parent=CGI_10005974;
	scaffold41982	TRF	Tandem_Repeat	91501	91552	104	+	.	.
scaffold41982	subtractBed	intrn	109470	109518	.	+	.	Parent=CGI_10005976;
	scaffold41982	TRF	Tandem_Repeat	109470	109518	98	+	.	.
scaffold41998	subtractBed	intrn	2588	2770	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	2588	2770	271	+	.	.
scaffold41998	subtractBed	intrn	2719	2978	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	2719	2978	197	+	.	.
scaffold41998	subtractBed	intrn	2769	2914	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	2769	2914	222	+	.	.
scaffold41998	subtractBed	intrn	2588	3358	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	2588	3358	953	+	.	.
scaffold41998	subtractBed	intrn	2912	3358	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	2912	3358	774	+	.	.
scaffold41998	subtractBed	intrn	3673	3736	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	3673	3736	128	+	.	.
scaffold41998	subtractBed	intrn	3808	3834	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	3808	3834	54	+	.	.
scaffold41998	subtractBed	intrn	4964	4998	.	-	.	Parent=CGI_10005908;
	scaffold41998	TRF	Tandem_Repeat	4964	4998	70	+	.	.
scaffold41998	subtractBed	intrn	6394	6418	.	-	.	Parent=CGI_10005909;
	scaffold41998	TRF	Tandem_Repeat	6394	6418	50	+	.	.
scaffold41998	subtractBed	intrn	41231	41262	.	-	.	Parent=CGI_10005911;
	scaffold41998	TRF	Tandem_Repeat	41231	41262	64	+	.	.
scaffold41998	subtractBed	intrn	41658	42056	.	-	.	Parent=CGI_10005911;
	scaffold41998	WUBlastX	LINE_RTE-BovB	41658	42056	297	-	.	.
scaffold41998	subtractBed	intrn	42038	44089	.	-	.	Parent=CGI_10005911;
	scaffold41998	WUBlastX	LINE_RTE-BovB	42038	44089	1798	-	.	.
scaffold41998	subtractBed	intrn	94177	94239	.	-	.	Parent=CGI_10005914;
	scaffold41998	TRF	Tandem_Repeat	94177	94239	126	+	.	.
scaffold41998	subtractBed	intrn	116075	116112	.	+	.	Parent=CGI_10005915;
	scaffold41998	TRF	Tandem_Repeat	116075	116112	51	+	.	.
scaffold41998	subtractBed	intrn	120320	120344	.	+	.	Parent=CGI_10005915;
	scaffold41998	TRF	Tandem_Repeat	120320	120344	50	+	.	.
scaffold41998	subtractBed	intrn	120320	120344	.	-	.	Parent=CGI_10005916;
	scaffold41998	TRF	Tandem_Repeat	120320	120344	50	+	.	.
scaffold42	subtractBed	intrn	80747	81298	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	80747	81298	130	-	.	.
scaffold42	subtractBed	intrn	78976	79422	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	78976	79422	200	-	.	.
scaffold42	subtractBed	intrn	80430	80753	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	80430	80753	32	-	.	.
scaffold42	subtractBed	intrn	79054	79422	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	79054	79422	234	-	.	.
scaffold42	subtractBed	intrn	79446	80180	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	79446	80180	481	-	.	.
scaffold42	subtractBed	intrn	80174	80482	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	80174	80482	82	-	.	.
scaffold42	subtractBed	intrn	78946	79053	.	-	.	Parent=CGI_10018905;
	scaffold42	WUBlastX	LTR_Ngaro	78946	79053	59	-	.	.
scaffold42	subtractBed	intrn	81694	82354	.	-	.	Parent=CGI_10018905;
	scaffold42	TRF	Tandem_Repeat	81694	82354	1035	+	.	.
scaffold42	subtractBed	intrn	132284	132343	.	-	.	Parent=CGI_10018908;
	scaffold42	TRF	Tandem_Repeat	132284	132343	111	+	.	.
scaffold42	subtractBed	intrn	132780	133201	.	-	.	Parent=CGI_10018908;
	scaffold42	TRF	Tandem_Repeat	132780	133201	470	+	.	.
scaffold42	subtractBed	intrn	149491	150292	.	+	.	Parent=CGI_10018909;
	scaffold42	TRF	Tandem_Repeat	149491	150292	1145	+	.	.
scaffold42	subtractBed	intrn	150552	151169	.	+	.	Parent=CGI_10018909;
	scaffold42	TRF	Tandem_Repeat	150552	151169	701	+	.	.
scaffold42	subtractBed	intrn	170755	171168	.	+	.	Parent=CGI_10018910;
	scaffold42	TRF	Tandem_Repeat	170755	171168	600	+	.	.
scaffold42	subtractBed	intrn	171727	172252	.	+	.	Parent=CGI_10018910;
	scaffold42	TRF	Tandem_Repeat	171727	172252	456	+	.	.
scaffold42	subtractBed	intrn	207724	207754	.	+	.	Parent=CGI_10018912;
	scaffold42	TRF	Tandem_Repeat	207724	207754	62	+	.	.
scaffold42	subtractBed	intrn	206806	206868	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_L2	206806	206868	20	+	.	.
scaffold42	subtractBed	intrn	206167	206547	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_L2	206167	206547	182	+	.	.
scaffold42	subtractBed	intrn	206552	206770	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_L2	206552	206770	142	+	.	.
scaffold42	subtractBed	intrn	206841	207317	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_L2	206841	207317	157	+	.	.
scaffold42	subtractBed	intrn	206555	206830	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_CR1-L2	206555	206830	107	+	.	.
scaffold42	subtractBed	intrn	205807	206178	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_RTE-X	205807	206178	51	-	.	.
scaffold42	subtractBed	intrn	205236	205343	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_L2	205236	205343	37	+	.	.
scaffold42	subtractBed	intrn	205233	205313	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_CR1	205233	205313	46	+	.	.
scaffold42	subtractBed	intrn	205173	205307	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_CR1	205173	205307	31	+	.	.
scaffold42	subtractBed	intrn	205631	205819	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_RTE-X	205631	205819	91	-	.	.
scaffold42	subtractBed	intrn	205224	205319	.	+	.	Parent=CGI_10018912;
	scaffold42	WUBlastX	LINE_CR1	205224	205319	37	+	.	.
scaffold42	subtractBed	intrn	215910	215947	.	+	.	Parent=CGI_10018912;
	scaffold42	TRF	Tandem_Repeat	215910	215947	76	+	.	.
scaffold42	subtractBed	intrn	221517	221568	.	+	.	Parent=CGI_10018912;
	scaffold42	TRF	Tandem_Repeat	221517	221568	81	+	.	.
scaffold42	subtractBed	intrn	221514	221563	.	+	.	Parent=CGI_10018912;
	scaffold42	TRF	Tandem_Repeat	221514	221563	57	+	.	.
scaffold42	subtractBed	intrn	285043	285078	.	-	.	Parent=CGI_10018913;
	scaffold42	TRF	Tandem_Repeat	285043	285078	54	+	.	.
scaffold42	subtractBed	intrn	367098	367098	.	+	.	Parent=CGI_10018915;
	scaffold42	WUBlastX	DNA_Kolobok	367098	367319	41	+	.	.
scaffold42	subtractBed	intrn	367315	367319	.	+	.	Parent=CGI_10018915;
	scaffold42	WUBlastX	DNA_Kolobok	367098	367319	41	+	.	.
scaffold42	subtractBed	intrn	367682	367706	.	+	.	Parent=CGI_10018915;
	scaffold42	WUBlastX	DNA_Kolobok	367449	367706	46	+	.	.
scaffold42	subtractBed	intrn	517232	517783	.	-	.	Parent=CGI_10018924;
	scaffold42	TRF	Tandem_Repeat	517232	517783	225	+	.	.
scaffold42	subtractBed	intrn	517232	517767	.	-	.	Parent=CGI_10018924;
	scaffold42	TRF	Tandem_Repeat	517232	517767	290	+	.	.
scaffold42	subtractBed	intrn	517409	517782	.	-	.	Parent=CGI_10018924;
	scaffold42	TRF	Tandem_Repeat	517409	517782	316	+	.	.
scaffold42	subtractBed	intrn	517510	517783	.	-	.	Parent=CGI_10018924;
	scaffold42	TRF	Tandem_Repeat	517510	517783	299	+	.	.
scaffold42	subtractBed	intrn	521252	521296	.	-	.	Parent=CGI_10018924;
	scaffold42	TRF	Tandem_Repeat	521252	521296	90	+	.	.
scaffold42	subtractBed	intrn	527731	527871	.	-	.	Parent=CGI_10018925;
	scaffold42	TRF	Tandem_Repeat	527731	527871	103	+	.	.
scaffold42	subtractBed	intrn	540351	540467	.	-	.	Parent=CGI_10018925;
	scaffold42	WUBlastX	LINE_Penelope	540351	540467	31	+	.	.
scaffold42	subtractBed	intrn	540530	540874	.	-	.	Parent=CGI_10018925;
	scaffold42	WUBlastX	LINE_Penelope	540530	540874	20	+	.	.
scaffold42022	subtractBed	intrn	6406	6454	.	+	.	Parent=CGI_10006048;
	scaffold42022	TRF	Tandem_Repeat	6406	6454	98	+	.	.
scaffold42022	subtractBed	intrn	6950	6998	.	+	.	Parent=CGI_10006048;
	scaffold42022	TRF	Tandem_Repeat	6950	6998	98	+	.	.
scaffold42022	subtractBed	intrn	11296	11338	.	+	.	Parent=CGI_10006048;
	scaffold42022	TRF	Tandem_Repeat	11296	11338	86	+	.	.
scaffold42022	subtractBed	intrn	34090	34206	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	LINE_L2	34090	34206	22	+	.	.
scaffold42022	subtractBed	intrn	33701	34054	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	LINE_L2	33701	34054	106	+	.	.
scaffold42022	subtractBed	intrn	34057	34272	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	LINE_L2	34057	34272	22	+	.	.
scaffold42022	subtractBed	intrn	45207	45335	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	45207	45335	29	-	.	.
scaffold42022	subtractBed	intrn	44969	45058	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	44969	45058	30	-	.	.
scaffold42022	subtractBed	intrn	45151	45198	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	45151	45198	21	-	.	.
scaffold42022	subtractBed	intrn	44622	44783	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_Kolobok-IS4	44622	44783	53	-	.	.
scaffold42022	subtractBed	intrn	43036	43983	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	43036	43983	218	+	.	.
scaffold42022	subtractBed	intrn	43979	44179	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	43979	44179	111	+	.	.
scaffold42022	subtractBed	intrn	44176	44361	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	44176	44361	141	+	.	.
scaffold42022	subtractBed	intrn	45207	45305	.	-	.	Parent=CGI_10006049;
	scaffold42022	WUBlastX	DNA_IS4EU	45207	45305	32	-	.	.
scaffold42030	subtractBed	intrn	30487	30532	.	+	.	Parent=CGI_10006042;
	scaffold42030	TRF	Tandem_Repeat	30487	30532	92	+	.	.
scaffold42030	subtractBed	intrn	36524	36576	.	+	.	Parent=CGI_10006043;
	scaffold42030	TRF	Tandem_Repeat	36524	36576	106	+	.	.
scaffold42030	subtractBed	intrn	78965	80656	.	+	.	Parent=CGI_10006046;
	scaffold42030	WUBlastX	LINE_RTE-X	78965	80656	719	+	.	.
scaffold42030	subtractBed	intrn	78914	79243	.	+	.	Parent=CGI_10006046;
	scaffold42030	WUBlastX	LINE_CR1	78914	79243	80	+	.	.
scaffold42030	subtractBed	intrn	77178	77630	.	+	.	Parent=CGI_10006046;
	scaffold42030	WUBlastX	LINE_CR1	77178	77630	79	+	.	.
scaffold42030	subtractBed	intrn	78622	78963	.	+	.	Parent=CGI_10006046;
	scaffold42030	WUBlastX	LINE_RTE-X	78622	78963	52	+	.	.
scaffold42030	subtractBed	intrn	77289	78563	.	+	.	Parent=CGI_10006046;
	scaffold42030	WUBlastX	LINE_RTE-X	77289	78563	223	+	.	.
scaffold42030	subtractBed	intrn	82142	82308	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	82142	82308	145	+	.	.
scaffold42030	subtractBed	intrn	82142	82288	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	82142	82288	156	+	.	.
scaffold42030	subtractBed	intrn	82945	83201	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	82945	83201	212	+	.	.
scaffold42030	subtractBed	intrn	82953	83229	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	82953	83229	396	+	.	.
scaffold42030	subtractBed	intrn	85038	85123	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	85038	85123	91	+	.	.
scaffold42030	subtractBed	intrn	86585	86712	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	86585	86712	94	+	.	.
scaffold42030	subtractBed	intrn	86640	86730	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	86640	86730	137	+	.	.
scaffold42030	subtractBed	intrn	93703	93748	.	+	.	Parent=CGI_10006046;
	scaffold42030	TRF	Tandem_Repeat	93703	93748	92	+	.	.
scaffold42032	subtractBed	intrn	40627	40834	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	40627	40834	335	+	.	.
scaffold42032	subtractBed	intrn	45503	45678	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	45503	45678	129	+	.	.
scaffold42032	subtractBed	intrn	50710	50800	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	50710	50800	146	+	.	.
scaffold42032	subtractBed	intrn	50766	50855	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	50766	50855	99	+	.	.
scaffold42032	subtractBed	intrn	52298	52404	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	52298	52404	142	+	.	.
scaffold42032	subtractBed	intrn	55253	55313	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	55253	55313	122	+	.	.
scaffold42032	subtractBed	intrn	66408	66469	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	66408	66469	124	+	.	.
scaffold42032	subtractBed	intrn	68808	68856	.	+	.	Parent=CGI_10006014;
	scaffold42032	TRF	Tandem_Repeat	68808	68856	91	+	.	.
scaffold42032	subtractBed	intrn	89616	89672	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	89616	89672	114	+	.	.
scaffold42032	subtractBed	intrn	90013	90062	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	90013	90062	100	+	.	.
scaffold42032	subtractBed	intrn	91407	91452	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	91407	91452	83	+	.	.
scaffold42032	subtractBed	intrn	93541	93598	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	93541	93598	98	+	.	.
scaffold42032	subtractBed	intrn	94631	94670	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	94631	94670	80	+	.	.
scaffold42032	subtractBed	intrn	94819	94871	.	-	.	Parent=CGI_10006015;
	scaffold42032	TRF	Tandem_Repeat	94819	94871	106	+	.	.
scaffold42032	subtractBed	intrn	100106	100157	.	-	.	Parent=CGI_10006016;
	scaffold42032	TRF	Tandem_Repeat	100106	100157	63	+	.	.
scaffold42032	subtractBed	intrn	101606	101635	.	-	.	Parent=CGI_10006016;
	scaffold42032	TRF	Tandem_Repeat	101606	101635	60	+	.	.
scaffold42040	subtractBed	intrn	17454	17485	.	-	.	Parent=CGI_10006020;
	scaffold42040	TRF	Tandem_Repeat	17454	17485	64	+	.	.
scaffold42040	subtractBed	intrn	50257	50591	.	+	.	Parent=CGI_10006023;
	scaffold42040	TRF	Tandem_Repeat	50257	50591	257	+	.	.
scaffold42040	subtractBed	intrn	51834	51896	.	+	.	Parent=CGI_10006023;
	scaffold42040	TRF	Tandem_Repeat	51834	51896	56	+	.	.
scaffold42040	subtractBed	intrn	85968	85999	.	-	.	Parent=CGI_10006025;
	scaffold42040	TRF	Tandem_Repeat	85968	85999	55	+	.	.
scaffold42040	subtractBed	intrn	88198	88539	.	-	.	Parent=CGI_10006025;
	scaffold42040	TRF	Tandem_Repeat	88198	88539	283	+	.	.
scaffold42040	subtractBed	intrn	89596	89739	.	-	.	Parent=CGI_10006025;
	scaffold42040	TRF	Tandem_Repeat	89596	89739	164	+	.	.
scaffold42040	subtractBed	intrn	89580	89731	.	-	.	Parent=CGI_10006025;
	scaffold42040	TRF	Tandem_Repeat	89580	89731	90	+	.	.
scaffold42040	subtractBed	intrn	89571	89743	.	-	.	Parent=CGI_10006025;
	scaffold42040	TRF	Tandem_Repeat	89571	89743	195	+	.	.
scaffold42046	subtractBed	intrn	20888	20917	.	-	.	Parent=CGI_10005999;
	scaffold42046	TRF	Tandem_Repeat	20888	20917	60	+	.	.
scaffold42046	subtractBed	intrn	55211	56147	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	55211	56147	1142	+	.	.
scaffold42046	subtractBed	intrn	55211	56147	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	55211	56147	1086	+	.	.
scaffold42046	subtractBed	intrn	57861	58520	.	+	.	Parent=CGI_10006002;
	scaffold42046	WUBlastX	LINE_RTE-BovB	57816	58520	61	+	.	.
scaffold42046	subtractBed	intrn	57960	59843	.	+	.	Parent=CGI_10006002;
	scaffold42046	WUBlastX	LINE_L1-Tx1	57960	59843	592	+	.	.
scaffold42046	subtractBed	intrn	60825	60885	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	60825	60885	61	+	.	.
scaffold42046	subtractBed	intrn	60824	60885	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	60824	60885	54	+	.	.
scaffold42046	subtractBed	intrn	61055	62232	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	61055	62232	1728	+	.	.
scaffold42046	subtractBed	intrn	63830	64083	.	+	.	Parent=CGI_10006002;
	scaffold42046	TRF	Tandem_Repeat	63829	64083	280	+	.	.
scaffold42046	subtractBed	intrn	80825	81088	.	-	.	Parent=CGI_10006003;
	scaffold42046	WUBlastX	DNA_Crypton	80825	81088	110	-	.	.
scaffold42046	subtractBed	intrn	81096	81380	.	-	.	Parent=CGI_10006003;
	scaffold42046	WUBlastX	DNA_Crypton	81096	81380	95	-	.	.
scaffold42046	subtractBed	intrn	82160	82221	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	82160	82221	124	+	.	.
scaffold42046	subtractBed	intrn	83334	83391	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	83334	83391	116	+	.	.
scaffold42046	subtractBed	intrn	84494	84679	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	84494	84679	246	+	.	.
scaffold42046	subtractBed	intrn	86003	86099	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	86003	86099	78	+	.	.
scaffold42046	subtractBed	intrn	87456	87623	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	87456	87623	207	+	.	.
scaffold42046	subtractBed	intrn	91512	91846	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	91512	91846	609	+	.	.
scaffold42046	subtractBed	intrn	95288	95337	.	-	.	Parent=CGI_10006003;
	scaffold42046	TRF	Tandem_Repeat	95288	95337	100	+	.	.
scaffold42060	subtractBed	intrn	25138	25189	.	+	.	Parent=CGI_10005937;
	scaffold42060	TRF	Tandem_Repeat	25138	25189	95	+	.	.
scaffold42060	subtractBed	intrn	87534	87638	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	87534	87638	192	+	.	.
scaffold42060	subtractBed	intrn	87933	87975	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	87933	87975	86	+	.	.
scaffold42060	subtractBed	intrn	88905	89671	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	88905	89671	961	+	.	.
scaffold42060	subtractBed	intrn	95641	95680	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	95641	95680	53	+	.	.
scaffold42060	subtractBed	intrn	96274	96666	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	96274	96666	354	+	.	.
scaffold42060	subtractBed	intrn	96274	96666	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	96274	96666	464	+	.	.
scaffold42060	subtractBed	intrn	96274	96657	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	96274	96657	498	+	.	.
scaffold42060	subtractBed	intrn	97315	97573	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	97315	97573	304	+	.	.
scaffold42060	subtractBed	intrn	97315	97573	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	97315	97573	340	+	.	.
scaffold42060	subtractBed	intrn	97315	97573	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	97315	97573	322	+	.	.
scaffold42060	subtractBed	intrn	112350	112393	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	112350	112393	88	+	.	.
scaffold42060	subtractBed	intrn	137269	137308	.	-	.	Parent=CGI_10005940;
	scaffold42060	TRF	Tandem_Repeat	137269	137308	80	+	.	.
scaffold42062	subtractBed	intrn	18461	18956	.	-	.	Parent=CGI_10006059;
	scaffold42062	TRF	Tandem_Repeat	18461	18956	411	+	.	.
scaffold42062	subtractBed	intrn	18594	18974	.	-	.	Parent=CGI_10006059;
	scaffold42062	TRF	Tandem_Repeat	18594	18974	408	+	.	.
scaffold42062	subtractBed	intrn	28405	28445	.	-	.	Parent=CGI_10006059;
	scaffold42062	TRF	Tandem_Repeat	28405	28445	82	+	.	.
scaffold42062	subtractBed	intrn	63943	64000	.	+	.	Parent=CGI_10006063;
	scaffold42062	TRF	Tandem_Repeat	63943	64000	116	+	.	.
scaffold42062	subtractBed	intrn	78296	78854	.	-	.	Parent=CGI_10006065;
	scaffold42062	TRF	Tandem_Repeat	78296	78854	527	+	.	.
scaffold42062	subtractBed	intrn	82893	84851	.	-	.	Parent=CGI_10006065;
	scaffold42062	TRF	Tandem_Repeat	82856	84851	3272	+	.	.
scaffold42062	subtractBed	intrn	84941	84975	.	-	.	Parent=CGI_10006065;
	scaffold42062	TRF	Tandem_Repeat	84941	84975	70	+	.	.
scaffold42062	subtractBed	intrn	85702	86251	.	-	.	Parent=CGI_10006065;
	scaffold42062	TRF	Tandem_Repeat	85702	86251	829	+	.	.
scaffold42062	subtractBed	intrn	94284	94334	.	-	.	Parent=CGI_10006066;
	scaffold42062	TRF	Tandem_Repeat	94284	94334	102	+	.	.
scaffold42062	subtractBed	intrn	94464	94509	.	-	.	Parent=CGI_10006066;
	scaffold42062	TRF	Tandem_Repeat	94464	94509	92	+	.	.
scaffold42062	subtractBed	intrn	95249	96509	.	-	.	Parent=CGI_10006066;
	scaffold42062	TRF	Tandem_Repeat	95249	96509	1348	+	.	.
scaffold42062	subtractBed	intrn	99779	100981	.	-	.	Parent=CGI_10006067;
	scaffold42062	TRF	Tandem_Repeat	99779	100981	1648	+	.	.
scaffold42062	subtractBed	intrn	103514	104629	.	-	.	Parent=CGI_10006067;
	scaffold42062	TRF	Tandem_Repeat	103514	104629	1497	+	.	.
scaffold42062	subtractBed	intrn	105620	105651	.	-	.	Parent=CGI_10006067;
	scaffold42062	TRF	Tandem_Repeat	105620	105651	64	+	.	.
scaffold42070	subtractBed	intrn	7535	7576	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	7535	7576	84	+	.	.
scaffold42070	subtractBed	intrn	7906	8743	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	7906	8743	1304	+	.	.
scaffold42070	subtractBed	intrn	9224	9985	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	9224	9985	969	+	.	.
scaffold42070	subtractBed	intrn	15182	15270	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	15182	15270	58	+	.	.
scaffold42070	subtractBed	intrn	22095	22130	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	22095	22130	72	+	.	.
scaffold42070	subtractBed	intrn	23770	23932	.	+	.	Parent=CGI_10006075;
	scaffold42070	TRF	Tandem_Repeat	23770	23932	211	+	.	.
scaffold42070	subtractBed	intrn	39211	39262	.	+	.	Parent=CGI_10006076;
	scaffold42070	TRF	Tandem_Repeat	39211	39262	95	+	.	.
scaffold42070	subtractBed	intrn	42016	43372	.	+	.	Parent=CGI_10006076;
	scaffold42070	TRF	Tandem_Repeat	42016	43372	1431	+	.	.
scaffold42070	subtractBed	intrn	42458	43301	.	+	.	Parent=CGI_10006076;
	scaffold42070	TRF	Tandem_Repeat	42458	43301	978	+	.	.
scaffold42070	subtractBed	intrn	50037	50074	.	+	.	Parent=CGI_10006077;
	scaffold42070	TRF	Tandem_Repeat	50037	50074	76	+	.	.
scaffold42070	subtractBed	intrn	67705	68070	.	+	.	Parent=CGI_10006078;
	scaffold42070	WUBlastX	LINE_L1	67705	68070	70	-	.	.
scaffold42070	subtractBed	intrn	67594	68067	.	+	.	Parent=CGI_10006078;
	scaffold42070	WUBlastX	LINE_L1	67594	68067	28	-	.	.
scaffold42070	subtractBed	intrn	67837	68091	.	+	.	Parent=CGI_10006078;
	scaffold42070	WUBlastX	LINE_L1-Tx1	67837	68091	190	-	.	.
scaffold42070	subtractBed	intrn	67834	68277	.	+	.	Parent=CGI_10006078;
	scaffold42070	WUBlastX	LINE_L1	67834	68277	37	-	.	.
scaffold42070	subtractBed	intrn	83677	83717	.	+	.	Parent=CGI_10006079;
	scaffold42070	TRF	Tandem_Repeat	83677	83717	73	+	.	.
scaffold42076	subtractBed	intrn	29210	29497	.	+	.	Parent=CGI_10006082;
	scaffold42076	WUBlastX	DNA_TcMar-Tc1	29210	29497	31	+	.	.
scaffold42076	subtractBed	intrn	29547	30230	.	+	.	Parent=CGI_10006082;
	scaffold42076	WUBlastX	DNA_TcMar-Tc1	29547	30230	326	+	.	.
scaffold42076	subtractBed	intrn	101230	101405	.	-	.	Parent=CGI_10006084;
	scaffold42076	TRF	Tandem_Repeat	101230	101405	133	+	.	.
scaffold42076	subtractBed	intrn	101353	101447	.	-	.	Parent=CGI_10006084;
	scaffold42076	TRF	Tandem_Repeat	101353	101447	93	+	.	.
scaffold42076	subtractBed	intrn	144347	144736	.	-	.	Parent=CGI_10006087;
	scaffold42076	WUBlastX	DNA_Harbinger	144347	144736	106	+	.	.
scaffold42076	subtractBed	intrn	144395	144664	.	-	.	Parent=CGI_10006087;
	scaffold42076	WUBlastX	DNA_Harbinger	144395	144664	109	+	.	.
scaffold42086	subtractBed	intrn	79049	79766	.	+	.	Parent=CGI_10006073;
	scaffold42086	TRF	Tandem_Repeat	79049	79766	971	+	.	.
scaffold42090	subtractBed	intrn	34672	34713	.	+	.	Parent=CGI_10006104;
	scaffold42090	TRF	Tandem_Repeat	34672	34713	68	+	.	.
scaffold42090	subtractBed	intrn	34675	34712	.	+	.	Parent=CGI_10006104;
	scaffold42090	TRF	Tandem_Repeat	34675	34712	51	+	.	.
scaffold42090	subtractBed	intrn	32539	33284	.	+	.	Parent=CGI_10006104;
	scaffold42090	TRF	Tandem_Repeat	32539	33284	946	+	.	.
scaffold42090	subtractBed	intrn	51305	51485	.	-	.	Parent=CGI_10006106;
	scaffold42090	TRF	Tandem_Repeat	51305	51485	198	+	.	.
scaffold42090	subtractBed	intrn	79602	79638	.	-	.	Parent=CGI_10006107;
	scaffold42090	TRF	Tandem_Repeat	79602	79638	67	+	.	.
scaffold42090	subtractBed	intrn	86462	86511	.	-	.	Parent=CGI_10006107;
	scaffold42090	TRF	Tandem_Repeat	86462	86511	100	+	.	.
scaffold42096	subtractBed	intrn	68229	69252	.	+	.	Parent=CGI_10006164;
	scaffold42096	TRF	Tandem_Repeat	68229	69252	1514	+	.	.
scaffold42096	subtractBed	intrn	89150	89260	.	+	.	Parent=CGI_10006164;
	scaffold42096	TRF	Tandem_Repeat	89150	89260	73	+	.	.
scaffold42096	subtractBed	intrn	89150	89246	.	+	.	Parent=CGI_10006164;
	scaffold42096	TRF	Tandem_Repeat	89150	89246	81	+	.	.
scaffold42096	subtractBed	intrn	89150	89309	.	+	.	Parent=CGI_10006164;
	scaffold42096	TRF	Tandem_Repeat	89150	89309	108	+	.	.
scaffold42096	subtractBed	intrn	105776	105844	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_CR1	105776	105844	23	+	.	.
scaffold42096	subtractBed	intrn	105186	105578	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_RTE-X	105186	105578	199	+	.	.
scaffold42096	subtractBed	intrn	105183	105710	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_RTE-X	105183	105710	112	+	.	.
scaffold42096	subtractBed	intrn	105249	105821	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_RTE-X	105249	105821	37	+	.	.
scaffold42096	subtractBed	intrn	111099	111139	.	-	.	Parent=CGI_10006165;
	scaffold42096	TRF	Tandem_Repeat	111099	111139	73	+	.	.
scaffold42096	subtractBed	intrn	107437	107574	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	DNA_Harbinger	107437	107574	24	+	.	.
scaffold42096	subtractBed	intrn	108923	109411	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_L2	108923	109411	154	+	.	.
scaffold42096	subtractBed	intrn	109040	109399	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_L2	109040	109399	308	+	.	.
scaffold42096	subtractBed	intrn	109431	109763	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_L2	109431	109763	245	+	.	.
scaffold42096	subtractBed	intrn	109765	110340	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_L2	109765	110340	336	+	.	.
scaffold42096	subtractBed	intrn	110328	110705	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	LINE_L2	110328	110705	94	+	.	.
scaffold42096	subtractBed	intrn	107935	108855	.	-	.	Parent=CGI_10006165;
	scaffold42096	WUBlastX	DNA_Harbinger	107935	108855	586	-	.	.
scaffold42096	subtractBed	intrn	111099	111139	.	+	.	Parent=CGI_10006166;
	scaffold42096	TRF	Tandem_Repeat	111099	111139	73	+	.	.
scaffold42096	subtractBed	intrn	107437	107574	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	DNA_Harbinger	107437	107574	24	+	.	.
scaffold42096	subtractBed	intrn	108923	109411	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	LINE_L2	108923	109411	154	+	.	.
scaffold42096	subtractBed	intrn	109040	109399	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	LINE_L2	109040	109399	308	+	.	.
scaffold42096	subtractBed	intrn	109431	109763	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	LINE_L2	109431	109763	245	+	.	.
scaffold42096	subtractBed	intrn	109765	110340	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	LINE_L2	109765	110340	336	+	.	.
scaffold42096	subtractBed	intrn	110328	110705	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	LINE_L2	110328	110705	94	+	.	.
scaffold42096	subtractBed	intrn	107935	108855	.	+	.	Parent=CGI_10006166;
	scaffold42096	WUBlastX	DNA_Harbinger	107935	108855	586	-	.	.
scaffold421	subtractBed	intrn	68304	68353	.	+	.	Parent=CGI_10012147;
	scaffold421	TRF	Tandem_Repeat	68304	68353	68	+	.	.
scaffold421	subtractBed	intrn	68399	69185	.	+	.	Parent=CGI_10012147;
	scaffold421	TRF	Tandem_Repeat	68399	69185	969	+	.	.
scaffold421	subtractBed	intrn	70137	70283	.	+	.	Parent=CGI_10012147;
	scaffold421	TRF	Tandem_Repeat	70137	70283	73	+	.	.
scaffold421	subtractBed	intrn	70199	70328	.	+	.	Parent=CGI_10012147;
	scaffold421	TRF	Tandem_Repeat	70199	70328	93	+	.	.
scaffold421	subtractBed	intrn	110082	110134	.	+	.	Parent=CGI_10012151;
	scaffold421	TRF	Tandem_Repeat	110082	110134	106	+	.	.
scaffold421	subtractBed	intrn	111481	111521	.	+	.	Parent=CGI_10012151;
	scaffold421	TRF	Tandem_Repeat	111481	111521	82	+	.	.
scaffold421	subtractBed	intrn	117778	117825	.	+	.	Parent=CGI_10012151;
	scaffold421	TRF	Tandem_Repeat	117778	117825	96	+	.	.
scaffold421	subtractBed	intrn	174992	175471	.	+	.	Parent=CGI_10012155;
	scaffold421	WUBlastX	LINE_L1-Tx1	174992	175471	28	-	.	.
scaffold421	subtractBed	intrn	175220	175516	.	+	.	Parent=CGI_10012155;
	scaffold421	WUBlastX	LINE_L1-Tx1	175220	175516	61	-	.	.
scaffold421	subtractBed	intrn	175070	175471	.	+	.	Parent=CGI_10012155;
	scaffold421	WUBlastX	LINE_L1-Tx1	175070	175471	126	-	.	.
scaffold421	subtractBed	intrn	187304	187516	.	+	.	Parent=CGI_10012156;
	scaffold421	WUBlastX	LINE_RTE-X	187304	187516	61	+	.	.
scaffold421	subtractBed	intrn	187283	187615	.	+	.	Parent=CGI_10012156;
	scaffold421	WUBlastX	LINE_RTE-X	187283	187615	20	+	.	.
scaffold421	subtractBed	intrn	187358	187555	.	+	.	Parent=CGI_10012156;
	scaffold421	WUBlastX	LINE_RTE-X	187358	187555	31	+	.	.
scaffold421	subtractBed	intrn	202382	202424	.	+	.	Parent=CGI_10012157;
	scaffold421	TRF	Tandem_Repeat	202382	202424	86	+	.	.
scaffold421	subtractBed	intrn	203537	203585	.	+	.	Parent=CGI_10012157;
	scaffold421	TRF	Tandem_Repeat	203537	203585	62	+	.	.
scaffold421	subtractBed	intrn	204608	204652	.	+	.	Parent=CGI_10012157;
	scaffold421	TRF	Tandem_Repeat	204608	204652	72	+	.	.
scaffold421	subtractBed	intrn	209135	209212	.	+	.	Parent=CGI_10012157;
	scaffold421	TRF	Tandem_Repeat	209135	209212	140	+	.	.
scaffold421	subtractBed	intrn	247413	247571	.	-	.	Parent=CGI_10012158;
	scaffold421	WUBlastX	LINE_RTE-X	247413	247571	81	-	.	.
scaffold421	subtractBed	intrn	247350	247667	.	-	.	Parent=CGI_10012158;
	scaffold421	WUBlastX	LINE_RTE-X	247350	247667	52	-	.	.
scaffold421	subtractBed	intrn	247404	247622	.	-	.	Parent=CGI_10012158;
	scaffold421	WUBlastX	LINE_RTE-X	247404	247622	64	-	.	.
scaffold421	subtractBed	intrn	247281	247571	.	-	.	Parent=CGI_10012158;
	scaffold421	WUBlastX	LINE_RTE-X	247281	247571	48	-	.	.
scaffold421	subtractBed	intrn	267422	267471	.	+	.	Parent=CGI_10012159;
	scaffold421	TRF	Tandem_Repeat	267422	267471	73	+	.	.
scaffold421	subtractBed	intrn	267831	267878	.	+	.	Parent=CGI_10012159;
	scaffold421	TRF	Tandem_Repeat	267831	267878	96	+	.	.
scaffold42112	subtractBed	intrn	28154	28940	.	-	.	Parent=CGI_10006114;
	scaffold42112	TRF	Tandem_Repeat	28154	28940	925	+	.	.
scaffold42112	subtractBed	intrn	81346	81376	.	+	.	Parent=CGI_10006120;
	scaffold42112	TRF	Tandem_Repeat	81346	81376	53	+	.	.
scaffold42112	subtractBed	intrn	81581	82672	.	+	.	Parent=CGI_10006120;
	scaffold42112	TRF	Tandem_Repeat	81581	82672	1657	+	.	.
scaffold42112	subtractBed	intrn	116470	116594	.	-	.	Parent=CGI_10006123;
	scaffold42112	TRF	Tandem_Repeat	116470	116594	101	+	.	.
scaffold42112	subtractBed	intrn	117613	118482	.	-	.	Parent=CGI_10006123;
	scaffold42112	TRF	Tandem_Repeat	117613	118482	1243	+	.	.
scaffold42112	subtractBed	intrn	135602	135666	.	-	.	Parent=CGI_10006125;
	scaffold42112	TRF	Tandem_Repeat	135602	135666	130	+	.	.
scaffold42124	subtractBed	intrn	34144	34194	.	+	.	Parent=CGI_10006230;
	scaffold42124	TRF	Tandem_Repeat	34144	34194	50	+	.	.
scaffold42124	subtractBed	intrn	34286	34419	.	+	.	Parent=CGI_10006230;
	scaffold42124	TRF	Tandem_Repeat	34286	34419	72	+	.	.
scaffold42124	subtractBed	intrn	38482	38537	.	+	.	Parent=CGI_10006230;
	scaffold42124	TRF	Tandem_Repeat	38482	38537	112	+	.	.
scaffold42124	subtractBed	intrn	42762	42965	.	+	.	Parent=CGI_10006230;
	scaffold42124	WUBlastX	DNA_MuDR	42762	42965	74	-	.	.
scaffold42124	subtractBed	intrn	42702	42965	.	+	.	Parent=CGI_10006230;
	scaffold42124	WUBlastX	DNA_MuDR	42702	42965	48	-	.	.
scaffold42124	subtractBed	intrn	65511	65876	.	+	.	Parent=CGI_10006232;
	scaffold42124	WUBlastX	LTR_Gypsy	65190	65876	61	+	.	.
scaffold42124	subtractBed	intrn	110278	110318	.	-	.	Parent=CGI_10006238;
	scaffold42124	TRF	Tandem_Repeat	110278	110318	82	+	.	.
scaffold42124	subtractBed	intrn	111544	111568	.	-	.	Parent=CGI_10006238;
	scaffold42124	TRF	Tandem_Repeat	111544	111568	50	+	.	.
scaffold42124	subtractBed	intrn	139768	139834	.	+	.	Parent=CGI_10006240;
	scaffold42124	TRF	Tandem_Repeat	139768	139834	134	+	.	.
scaffold42128	subtractBed	intrn	12002	12727	.	+	.	Parent=CGI_10006194;
	scaffold42128	WUBlastX	DNA_TcMar-Tc1	12002	12727	193	+	.	.
scaffold42128	subtractBed	intrn	12784	12948	.	+	.	Parent=CGI_10006194;
	scaffold42128	WUBlastX	DNA_TcMar-Tc1	12784	12948	53	+	.	.
scaffold42128	subtractBed	intrn	11706	12173	.	+	.	Parent=CGI_10006194;
	scaffold42128	WUBlastX	DNA_TcMar-Tc1	11706	12173	123	+	.	.
scaffold42128	subtractBed	intrn	12170	12727	.	+	.	Parent=CGI_10006194;
	scaffold42128	WUBlastX	DNA_TcMar-Tc1	12170	12727	278	+	.	.
scaffold42128	subtractBed	intrn	12811	12948	.	+	.	Parent=CGI_10006194;
	scaffold42128	WUBlastX	DNA_TcMar-Tc1	12811	12948	78	+	.	.
scaffold42128	subtractBed	intrn	53564	54388	.	+	.	Parent=CGI_10006196;
	scaffold42128	TRF	Tandem_Repeat	53564	54388	1154	+	.	.
scaffold42128	subtractBed	intrn	116568	116616	.	-	.	Parent=CGI_10006199;
	scaffold42128	TRF	Tandem_Repeat	116568	116616	98	+	.	.
scaffold42128	subtractBed	intrn	114954	115412	.	-	.	Parent=CGI_10006199;
	scaffold42128	WUBlastX	LINE_L2	114954	115412	133	-	.	.
scaffold42128	subtractBed	intrn	137897	137935	.	-	.	Parent=CGI_10006201;
	scaffold42128	TRF	Tandem_Repeat	137897	137935	55	+	.	.
scaffold42128	subtractBed	intrn	136918	137238	.	-	.	Parent=CGI_10006201;
	scaffold42128	WUBlastX	LINE_CR1	136918	137238	62	-	.	.
scaffold42144	subtractBed	intrn	30057	30095	.	+	.	Parent=CGI_10006246;
	scaffold42144	TRF	Tandem_Repeat	30057	30095	78	+	.	.
scaffold42144	subtractBed	intrn	40479	40518	.	+	.	Parent=CGI_10006246;
	scaffold42144	TRF	Tandem_Repeat	40479	40518	80	+	.	.
scaffold42144	subtractBed	intrn	50486	50525	.	+	.	Parent=CGI_10006246;
	scaffold42144	TRF	Tandem_Repeat	50486	50525	80	+	.	.
scaffold42144	subtractBed	intrn	71034	71135	.	-	.	Parent=CGI_10006247;
	scaffold42144	TRF	Tandem_Repeat	71034	71135	89	+	.	.
scaffold42144	subtractBed	intrn	75187	75238	.	-	.	Parent=CGI_10006247;
	scaffold42144	TRF	Tandem_Repeat	75187	75238	97	+	.	.
scaffold42144	subtractBed	intrn	108436	109431	.	-	.	Parent=CGI_10006248;
	scaffold42144	WUBlastX	DNA_TcMar-Tc1	108436	109431	244	+	.	.
scaffold42144	subtractBed	intrn	108183	108281	.	-	.	Parent=CGI_10006248;
	scaffold42144	WUBlastX	DNA_TcMar-Marin	108183	108281	20	+	.	.
scaffold42144	subtractBed	intrn	116427	116602	.	-	.	Parent=CGI_10006248;
	scaffold42144	TRF	Tandem_Repeat	116427	116602	352	+	.	.
scaffold42144	subtractBed	intrn	122450	122485	.	-	.	Parent=CGI_10006248;
	scaffold42144	TRF	Tandem_Repeat	122450	122485	63	+	.	.
scaffold42144	subtractBed	intrn	122694	122838	.	-	.	Parent=CGI_10006248;
	scaffold42144	TRF	Tandem_Repeat	122694	122838	112	+	.	.
scaffold42144	subtractBed	intrn	124336	124779	.	-	.	Parent=CGI_10006248;
	scaffold42144	WUBlastX	LINE_RTE-X	124336	124779	118	+	.	.
scaffold42144	subtractBed	intrn	124408	124779	.	-	.	Parent=CGI_10006248;
	scaffold42144	WUBlastX	LINE_RTE-X	124408	124779	156	+	.	.
scaffold42144	subtractBed	intrn	128028	128801	.	+	.	Parent=CGI_10006249;
	scaffold42144	WUBlastX	LTR_Gypsy	128028	128801	131	-	.	.
scaffold42144	subtractBed	intrn	135811	135879	.	+	.	Parent=CGI_10006249;
	scaffold42144	TRF	Tandem_Repeat	135811	135879	138	+	.	.
scaffold42144	subtractBed	intrn	140529	140585	.	+	.	Parent=CGI_10006249;
	scaffold42144	TRF	Tandem_Repeat	140529	140585	114	+	.	.
scaffold42158	subtractBed	intrn	15037	15064	.	-	.	Parent=CGI_10006299;
	scaffold42158	TRF	Tandem_Repeat	15037	15064	56	+	.	.
scaffold42158	subtractBed	intrn	41587	41953	.	+	.	Parent=CGI_10006300;
	scaffold42158	TRF	Tandem_Repeat	41587	41953	671	+	.	.
scaffold42158	subtractBed	intrn	52245	52435	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	52245	52439	273	+	.	.
scaffold42158	subtractBed	intrn	53144	53183	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	53144	53183	80	+	.	.
scaffold42158	subtractBed	intrn	55442	56124	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	55439	56124	1146	+	.	.
scaffold42158	subtractBed	intrn	55442	56124	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	55439	56124	1200	+	.	.
scaffold42158	subtractBed	intrn	57746	58119	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	57746	58119	396	+	.	.
scaffold42158	subtractBed	intrn	60043	61587	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	60043	61587	2586	+	.	.
scaffold42158	subtractBed	intrn	60399	60669	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	60399	60669	72	+	.	.
scaffold42158	subtractBed	intrn	61584	61756	.	-	.	Parent=CGI_10006301;
	scaffold42158	TRF	Tandem_Repeat	61584	61756	292	+	.	.
scaffold42158	subtractBed	intrn	87505	87577	.	+	.	Parent=CGI_10006305;
	scaffold42158	TRF	Tandem_Repeat	87505	87577	146	+	.	.
scaffold42164	subtractBed	intrn	33979	34018	.	+	.	Parent=CGI_10006315;
	scaffold42164	TRF	Tandem_Repeat	33979	34018	80	+	.	.
scaffold42164	subtractBed	intrn	122254	122297	.	-	.	Parent=CGI_10006322;
	scaffold42164	TRF	Tandem_Repeat	122254	122297	88	+	.	.
scaffold42164	subtractBed	intrn	123380	123432	.	-	.	Parent=CGI_10006322;
	scaffold42164	TRF	Tandem_Repeat	123380	123432	97	+	.	.
scaffold42166	subtractBed	intrn	111362	111412	.	-	.	Parent=CGI_10006280;
	scaffold42166	TRF	Tandem_Repeat	111362	111412	102	+	.	.
scaffold42172	subtractBed	intrn	130372	130447	.	-	.	Parent=CGI_10006334;
	scaffold42172	TRF	Tandem_Repeat	130372	130447	152	+	.	.
scaffold42184	subtractBed	intrn	5461	5511	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	5461	5511	66	+	.	.
scaffold42184	subtractBed	intrn	5468	5510	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	5468	5510	50	+	.	.
scaffold42184	subtractBed	intrn	12935	12980	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	12935	12980	57	+	.	.
scaffold42184	subtractBed	intrn	12936	12977	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	12936	12977	50	+	.	.
scaffold42184	subtractBed	intrn	14201	15452	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	14201	15452	1728	+	.	.
scaffold42184	subtractBed	intrn	21938	22135	.	-	.	Parent=CGI_10006326;
	scaffold42184	TRF	Tandem_Repeat	21938	22142	392	+	.	.
scaffold42184	subtractBed	intrn	32017	32205	.	+	.	Parent=CGI_10006327;
	scaffold42184	TRF	Tandem_Repeat	32017	32205	162	+	.	.
scaffold42184	subtractBed	intrn	32060	32217	.	+	.	Parent=CGI_10006327;
	scaffold42184	TRF	Tandem_Repeat	32060	32217	226	+	.	.
scaffold42184	subtractBed	intrn	32899	33051	.	+	.	Parent=CGI_10006327;
	scaffold42184	TRF	Tandem_Repeat	32899	33051	234	+	.	.
scaffold42184	subtractBed	intrn	35163	35526	.	+	.	Parent=CGI_10006327;
	scaffold42184	TRF	Tandem_Repeat	35163	35526	469	+	.	.
scaffold42184	subtractBed	intrn	36491	36958	.	+	.	Parent=CGI_10006327;
	scaffold42184	TRF	Tandem_Repeat	36491	36958	343	+	.	.
scaffold42184	subtractBed	intrn	43635	43993	.	-	.	Parent=CGI_10006328;
	scaffold42184	TRF	Tandem_Repeat	43622	43993	564	+	.	.
scaffold42184	subtractBed	intrn	43635	43993	.	-	.	Parent=CGI_10006328;
	scaffold42184	TRF	Tandem_Repeat	43622	43993	568	+	.	.
scaffold42184	subtractBed	intrn	43920	44179	.	-	.	Parent=CGI_10006328;
	scaffold42184	TRF	Tandem_Repeat	43920	44179	245	+	.	.
scaffold42184	subtractBed	intrn	77919	77949	.	+	.	Parent=CGI_10006329;
	scaffold42184	TRF	Tandem_Repeat	77919	77949	62	+	.	.
scaffold42184	subtractBed	intrn	79655	79702	.	+	.	Parent=CGI_10006329;
	scaffold42184	TRF	Tandem_Repeat	79655	79702	87	+	.	.
scaffold42184	subtractBed	intrn	80606	80794	.	+	.	Parent=CGI_10006329;
	scaffold42184	TRF	Tandem_Repeat	80606	80794	301	+	.	.
scaffold42184	subtractBed	intrn	100199	100226	.	-	.	Parent=CGI_10006331;
	scaffold42184	TRF	Tandem_Repeat	100199	100226	56	+	.	.
scaffold42190	subtractBed	intrn	75246	75306	.	-	.	Parent=CGI_10006336;
	scaffold42190	TRF	Tandem_Repeat	75246	75306	95	+	.	.
scaffold42190	subtractBed	intrn	75243	75306	.	-	.	Parent=CGI_10006336;
	scaffold42190	TRF	Tandem_Repeat	75243	75306	101	+	.	.
scaffold42190	subtractBed	intrn	97999	98075	.	-	.	Parent=CGI_10006338;
	scaffold42190	TRF	Tandem_Repeat	97999	98075	154	+	.	.
scaffold42190	subtractBed	intrn	97999	98075	.	+	.	Parent=CGI_10006339;
	scaffold42190	TRF	Tandem_Repeat	97999	98075	154	+	.	.
scaffold42190	subtractBed	intrn	110767	110803	.	+	.	Parent=CGI_10006339;
	scaffold42190	TRF	Tandem_Repeat	110767	110803	65	+	.	.
scaffold42190	subtractBed	intrn	110767	110806	.	+	.	Parent=CGI_10006339;
	scaffold42190	TRF	Tandem_Repeat	110767	110806	53	+	.	.
scaffold42190	subtractBed	intrn	117136	117358	.	+	.	Parent=CGI_10006339;
	scaffold42190	TRF	Tandem_Repeat	117136	117358	322	+	.	.
scaffold422	subtractBed	intrn	16148	16182	.	+	.	Parent=CGI_10018792;
	scaffold422	TRF	Tandem_Repeat	16148	16182	70	+	.	.
scaffold422	subtractBed	intrn	20499	20525	.	+	.	Parent=CGI_10018792;
	scaffold422	TRF	Tandem_Repeat	20499	20525	54	+	.	.
scaffold422	subtractBed	intrn	112162	112320	.	-	.	Parent=CGI_10018794;
	scaffold422	TRF	Tandem_Repeat	112162	112320	192	+	.	.
scaffold422	subtractBed	intrn	117827	118369	.	-	.	Parent=CGI_10018795;
	scaffold422	WUBlastX	LINE_L2	117827	118369	141	+	.	.
scaffold422	subtractBed	intrn	163671	163857	.	+	.	Parent=CGI_10018796;
	scaffold422	TRF	Tandem_Repeat	163671	163857	187	+	.	.
scaffold422	subtractBed	intrn	164562	164668	.	+	.	Parent=CGI_10018796;
	scaffold422	TRF	Tandem_Repeat	164562	164668	74	+	.	.
scaffold422	subtractBed	intrn	181152	181180	.	+	.	Parent=CGI_10018798;
	scaffold422	TRF	Tandem_Repeat	181152	181180	58	+	.	.
scaffold422	subtractBed	intrn	184799	184860	.	+	.	Parent=CGI_10018798;
	scaffold422	TRF	Tandem_Repeat	184799	184860	70	+	.	.
scaffold422	subtractBed	intrn	184792	184861	.	+	.	Parent=CGI_10018798;
	scaffold422	TRF	Tandem_Repeat	184792	184861	140	+	.	.
scaffold422	subtractBed	intrn	186206	186307	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	186206	186307	39	-	.	.
scaffold422	subtractBed	intrn	185389	185700	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	185389	185700	45	-	.	.
scaffold422	subtractBed	intrn	186179	186307	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	186179	186307	24	-	.	.
scaffold422	subtractBed	intrn	185470	185691	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	185470	185691	80	-	.	.
scaffold422	subtractBed	intrn	185733	186137	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	185733	186137	51	-	.	.
scaffold422	subtractBed	intrn	186218	186340	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	186218	186340	23	-	.	.
scaffold422	subtractBed	intrn	189465	189770	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	189465	189770	27	-	.	.
scaffold422	subtractBed	intrn	189784	189939	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	189784	189939	59	-	.	.
scaffold422	subtractBed	intrn	189685	189942	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	189685	189942	40	-	.	.
scaffold422	subtractBed	intrn	189745	189939	.	+	.	Parent=CGI_10018798;
	scaffold422	WUBlastX	LINE_RTE-X	189745	189939	50	-	.	.
scaffold422	subtractBed	intrn	217149	217249	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	217149	217249	61	+	.	.
scaffold422	subtractBed	intrn	217682	217845	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	217682	217845	129	+	.	.
scaffold422	subtractBed	intrn	219116	219460	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219116	219460	138	+	.	.
scaffold422	subtractBed	intrn	219156	219460	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219156	219460	195	+	.	.
scaffold422	subtractBed	intrn	219417	219804	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219417	219804	253	+	.	.
scaffold422	subtractBed	intrn	219241	220547	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219241	220547	682	+	.	.
scaffold422	subtractBed	intrn	219214	220531	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219214	220531	771	+	.	.
scaffold422	subtractBed	intrn	219671	220521	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219671	220521	461	+	.	.
scaffold422	subtractBed	intrn	219809	220547	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	219809	220547	746	+	.	.
scaffold422	subtractBed	intrn	220897	220991	.	+	.	Parent=CGI_10018801;
	scaffold422	TRF	Tandem_Repeat	220897	220991	151	+	.	.
scaffold422	subtractBed	intrn	235042	235311	.	+	.	Parent=CGI_10018802;
	scaffold422	TRF	Tandem_Repeat	235042	235311	441	+	.	.
scaffold422	subtractBed	intrn	235680	236094	.	+	.	Parent=CGI_10018802;
	scaffold422	TRF	Tandem_Repeat	235680	236094	521	+	.	.
scaffold422	subtractBed	intrn	242944	243061	.	+	.	Parent=CGI_10018804;
	scaffold422	TRF	Tandem_Repeat	242944	243061	218	+	.	.
scaffold422	subtractBed	intrn	243451	243503	.	+	.	Parent=CGI_10018804;
	scaffold422	TRF	Tandem_Repeat	243451	243503	106	+	.	.
scaffold422	subtractBed	intrn	245106	245165	.	+	.	Parent=CGI_10018804;
	scaffold422	TRF	Tandem_Repeat	245106	245165	120	+	.	.
scaffold422	subtractBed	intrn	343489	343549	.	+	.	Parent=CGI_10018809;
	scaffold422	TRF	Tandem_Repeat	343489	343549	59	+	.	.
scaffold422	subtractBed	intrn	345476	345514	.	+	.	Parent=CGI_10018809;
	scaffold422	TRF	Tandem_Repeat	345476	345514	78	+	.	.
scaffold422	subtractBed	intrn	449142	449187	.	-	.	Parent=CGI_10018811;
	scaffold422	TRF	Tandem_Repeat	449142	449187	92	+	.	.
scaffold422	subtractBed	intrn	481052	481360	.	-	.	Parent=CGI_10018813;
	scaffold422	TRF	Tandem_Repeat	481052	481360	408	+	.	.
scaffold42208	subtractBed	intrn	23742	23856	.	+	.	Parent=CGI_10006349;
	scaffold42208	TRF	Tandem_Repeat	23742	23856	83	+	.	.
scaffold42208	subtractBed	intrn	43172	43205	.	-	.	Parent=CGI_10006350;
	scaffold42208	TRF	Tandem_Repeat	43172	43205	68	+	.	.
scaffold42208	subtractBed	intrn	42531	42701	.	-	.	Parent=CGI_10006350;
	scaffold42208	WUBlastX	LINE_CR1-L2	42531	42701	50	+	.	.
scaffold42208	subtractBed	intrn	64771	64832	.	+	.	Parent=CGI_10006351;
	scaffold42208	TRF	Tandem_Repeat	64771	64832	117	+	.	.
scaffold42210	subtractBed	intrn	99548	99573	.	+	.	Parent=CGI_10006389;
	scaffold42210	TRF	Tandem_Repeat	99548	99573	52	+	.	.
scaffold42210	subtractBed	intrn	101065	101865	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	101065	101865	254	+	.	.
scaffold42210	subtractBed	intrn	103393	103527	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1	103393	103527	28	+	.	.
scaffold42210	subtractBed	intrn	99791	99952	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	99791	99952	22	+	.	.
scaffold42210	subtractBed	intrn	100191	100421	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	100191	100421	72	+	.	.
scaffold42210	subtractBed	intrn	100436	101128	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	100436	101128	161	+	.	.
scaffold42210	subtractBed	intrn	101356	101904	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	101356	101904	381	+	.	.
scaffold42210	subtractBed	intrn	101869	103503	.	+	.	Parent=CGI_10006389;
	scaffold42210	WUBlastX	LINE_L1-Tx1	101869	103503	433	+	.	.
scaffold42210	subtractBed	intrn	106792	106842	.	+	.	Parent=CGI_10006389;
	scaffold42210	TRF	Tandem_Repeat	106792	106842	50	+	.	.
scaffold42210	subtractBed	intrn	106799	106842	.	+	.	Parent=CGI_10006389;
	scaffold42210	TRF	Tandem_Repeat	106799	106842	54	+	.	.
scaffold42210	subtractBed	intrn	138908	139128	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	138908	139128	194	+	.	.
scaffold42210	subtractBed	intrn	139155	139347	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	139155	139347	192	+	.	.
scaffold42210	subtractBed	intrn	139155	139347	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	139155	139347	170	+	.	.
scaffold42210	subtractBed	intrn	139413	139498	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	139413	139498	91	+	.	.
scaffold42210	subtractBed	intrn	140551	140597	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	140551	140597	94	+	.	.
scaffold42210	subtractBed	intrn	141418	141473	.	+	.	Parent=CGI_10006390;
	scaffold42210	TRF	Tandem_Repeat	141418	141473	112	+	.	.
scaffold42214	subtractBed	intrn	111376	111424	.	+	.	Parent=CGI_10006416;
	scaffold42214	TRF	Tandem_Repeat	111376	111424	89	+	.	.
scaffold42214	subtractBed	intrn	132647	132700	.	+	.	Parent=CGI_10006419;
	scaffold42214	TRF	Tandem_Repeat	132647	132700	101	+	.	.
scaffold42226	subtractBed	intrn	22318	22361	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	22318	22361	52	+	.	.
scaffold42226	subtractBed	intrn	15269	17011	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	15269	17011	2521	+	.	.
scaffold42226	subtractBed	intrn	24683	24740	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	24683	24740	107	+	.	.
scaffold42226	subtractBed	intrn	25284	25329	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	25284	25329	92	+	.	.
scaffold42226	subtractBed	intrn	33494	33624	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	33494	33624	246	+	.	.
scaffold42226	subtractBed	intrn	34785	34884	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	34785	34884	191	+	.	.
scaffold42226	subtractBed	intrn	37139	37893	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	37139	37893	340	+	.	.
scaffold42226	subtractBed	intrn	37139	37893	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	37139	37893	568	+	.	.
scaffold42226	subtractBed	intrn	37139	37893	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	37139	37893	477	+	.	.
scaffold42226	subtractBed	intrn	37464	37893	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	37464	37893	577	+	.	.
scaffold42226	subtractBed	intrn	39006	39202	.	-	.	Parent=CGI_10006360;
	scaffold42226	TRF	Tandem_Repeat	39006	39202	170	+	.	.
scaffold42226	subtractBed	intrn	44503	44728	.	+	.	Parent=CGI_10006361;
	scaffold42226	TRF	Tandem_Repeat	44503	44728	389	+	.	.
scaffold42226	subtractBed	intrn	57296	57697	.	+	.	Parent=CGI_10006361;
	scaffold42226	TRF	Tandem_Repeat	57296	57697	544	+	.	.
scaffold42226	subtractBed	intrn	58848	59531	.	+	.	Parent=CGI_10006361;
	scaffold42226	TRF	Tandem_Repeat	58841	59531	622	+	.	.
scaffold42226	subtractBed	intrn	59185	59506	.	+	.	Parent=CGI_10006361;
	scaffold42226	TRF	Tandem_Repeat	59185	59506	365	+	.	.
scaffold42226	subtractBed	intrn	58867	59506	.	+	.	Parent=CGI_10006361;
	scaffold42226	TRF	Tandem_Repeat	58867	59506	462	+	.	.
scaffold42226	subtractBed	intrn	75585	76247	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	75585	76289	265	+	.	.
scaffold42226	subtractBed	intrn	75593	76247	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	75593	76289	821	+	.	.
scaffold42226	subtractBed	intrn	77713	78163	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	77713	78163	595	+	.	.
scaffold42226	subtractBed	intrn	78522	78648	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	78522	78662	208	+	.	.
scaffold42226	subtractBed	intrn	81252	81403	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	81252	81403	208	+	.	.
scaffold42226	subtractBed	intrn	81260	82284	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	81260	82284	1088	+	.	.
scaffold42226	subtractBed	intrn	81483	82354	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	81483	82354	814	+	.	.
scaffold42226	subtractBed	intrn	81499	82373	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	81499	82373	766	+	.	.
scaffold42226	subtractBed	intrn	82647	82730	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	82647	82730	64	+	.	.
scaffold42226	subtractBed	intrn	82915	83180	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	82915	83180	198	+	.	.
scaffold42226	subtractBed	intrn	83046	83130	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	83046	83130	80	+	.	.
scaffold42226	subtractBed	intrn	84150	84187	.	-	.	Parent=CGI_10006362;
	scaffold42226	TRF	Tandem_Repeat	84150	84187	58	+	.	.
scaffold42226	subtractBed	intrn	101683	101825	.	+	.	Parent=CGI_10006363;
	scaffold42226	TRF	Tandem_Repeat	101683	101825	153	+	.	.
scaffold42226	subtractBed	intrn	112804	113028	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	LINE_RTE-X	112804	113028	53	+	.	.
scaffold42226	subtractBed	intrn	121725	121985	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	121725	121985	148	-	.	.
scaffold42226	subtractBed	intrn	119075	119317	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	119075	119317	139	+	.	.
scaffold42226	subtractBed	intrn	121366	121638	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	121366	121638	87	-	.	.
scaffold42226	subtractBed	intrn	120356	120592	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	120356	120592	100	-	.	.
scaffold42226	subtractBed	intrn	120758	120952	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	120758	120952	72	-	.	.
scaffold42226	subtractBed	intrn	121087	121302	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	121087	121302	41	-	.	.
scaffold42226	subtractBed	intrn	122100	122381	.	+	.	Parent=CGI_10006364;
	scaffold42226	WUBlastX	DNA_Kolobok	122100	122381	96	-	.	.
scaffold42236	subtractBed	intrn	32269	32412	.	-	.	Parent=CGI_10006397;
	scaffold42236	TRF	Tandem_Repeat	32269	32412	53	+	.	.
scaffold42236	subtractBed	intrn	32291	32413	.	-	.	Parent=CGI_10006397;
	scaffold42236	TRF	Tandem_Repeat	32291	32413	108	+	.	.
scaffold42236	subtractBed	intrn	60153	60218	.	+	.	Parent=CGI_10006401;
	scaffold42236	TRF	Tandem_Repeat	60153	60218	123	+	.	.
scaffold42236	subtractBed	intrn	115782	115822	.	+	.	Parent=CGI_10006406;
	scaffold42236	TRF	Tandem_Repeat	115782	115822	82	+	.	.
scaffold42236	subtractBed	intrn	119339	119341	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	119339	119560	160	+	.	.
scaffold42236	subtractBed	intrn	119531	119560	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	119339	119560	160	+	.	.
scaffold42236	subtractBed	intrn	126456	126456	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	126361	126456	54	+	.	.
scaffold42236	subtractBed	intrn	126900	127028	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	126644	127126	127	+	.	.
scaffold42236	subtractBed	intrn	127381	127382	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	127381	127524	47	+	.	.
scaffold42236	subtractBed	intrn	129454	129456	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	129454	129585	56	+	.	.
scaffold42236	subtractBed	intrn	129585	129585	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	129454	129585	56	+	.	.
scaffold42236	subtractBed	intrn	129699	129700	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	129699	129764	23	+	.	.
scaffold42236	subtractBed	intrn	129980	130369	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	129980	130369	289	+	.	.
scaffold42236	subtractBed	intrn	132561	132561	.	+	.	Parent=CGI_10006406;
	scaffold42236	WUBlastX	DNA_hAT	132561	132698	68	+	.	.
scaffold42246	subtractBed	intrn	11598	11718	.	+	.	Parent=CGI_10006474;
	scaffold42246	TRF	Tandem_Repeat	11598	11718	138	+	.	.
scaffold42246	subtractBed	intrn	13583	13635	.	+	.	Parent=CGI_10006474;
	scaffold42246	TRF	Tandem_Repeat	13583	13635	90	+	.	.
scaffold42246	subtractBed	intrn	19369	19565	.	+	.	Parent=CGI_10006474;
	scaffold42246	TRF	Tandem_Repeat	19369	19565	148	+	.	.
scaffold42246	subtractBed	intrn	45098	45452	.	+	.	Parent=CGI_10006474;
	scaffold42246	TRF	Tandem_Repeat	45098	45452	264	+	.	.
scaffold42246	subtractBed	intrn	43911	44600	.	+	.	Parent=CGI_10006474;
	scaffold42246	WUBlastX	DNA_hAT	43911	44600	139	+	.	.
scaffold42246	subtractBed	intrn	47144	47145	.	+	.	Parent=CGI_10006474;
	scaffold42246	WUBlastX	DNA_hAT	47144	47350	47	+	.	.
scaffold42246	subtractBed	intrn	53625	53669	.	+	.	Parent=CGI_10006475;
	scaffold42246	TRF	Tandem_Repeat	53625	53669	90	+	.	.
scaffold42246	subtractBed	intrn	55460	55515	.	+	.	Parent=CGI_10006475;
	scaffold42246	TRF	Tandem_Repeat	55460	55515	62	+	.	.
scaffold42246	subtractBed	intrn	57309	57345	.	+	.	Parent=CGI_10006475;
	scaffold42246	TRF	Tandem_Repeat	57309	57345	58	+	.	.
scaffold42246	subtractBed	intrn	62939	62981	.	-	.	Parent=CGI_10006476;
	scaffold42246	TRF	Tandem_Repeat	62939	62981	77	+	.	.
scaffold42246	subtractBed	intrn	75688	75739	.	-	.	Parent=CGI_10006476;
	scaffold42246	TRF	Tandem_Repeat	75688	75739	104	+	.	.
scaffold42246	subtractBed	intrn	80065	80117	.	-	.	Parent=CGI_10006476;
	scaffold42246	TRF	Tandem_Repeat	80065	80117	106	+	.	.
scaffold42246	subtractBed	intrn	83912	83960	.	-	.	Parent=CGI_10006476;
	scaffold42246	TRF	Tandem_Repeat	83912	83960	98	+	.	.
scaffold42246	subtractBed	intrn	87393	87423	.	-	.	Parent=CGI_10006476;
	scaffold42246	TRF	Tandem_Repeat	87393	87423	62	+	.	.
scaffold42246	subtractBed	intrn	118060	118091	.	-	.	Parent=CGI_10006478;
	scaffold42246	TRF	Tandem_Repeat	118060	118091	55	+	.	.
scaffold42246	subtractBed	intrn	128260	128285	.	-	.	Parent=CGI_10006478;
	scaffold42246	TRF	Tandem_Repeat	128260	128285	52	+	.	.
scaffold42246	subtractBed	intrn	134037	134088	.	-	.	Parent=CGI_10006478;
	scaffold42246	TRF	Tandem_Repeat	134037	134088	68	+	.	.
scaffold42252	subtractBed	intrn	79910	80616	.	-	.	Parent=CGI_10006467;
	scaffold42252	TRF	Tandem_Repeat	79910	80616	914	+	.	.
scaffold42252	subtractBed	intrn	80621	80670	.	-	.	Parent=CGI_10006467;
	scaffold42252	TRF	Tandem_Repeat	80621	80670	64	+	.	.
scaffold42252	subtractBed	intrn	80624	80675	.	-	.	Parent=CGI_10006467;
	scaffold42252	TRF	Tandem_Repeat	80624	80675	59	+	.	.
scaffold42252	subtractBed	intrn	141342	141426	.	+	.	Parent=CGI_10006471;
	scaffold42252	TRF	Tandem_Repeat	141342	141426	154	+	.	.
scaffold42252	subtractBed	intrn	145734	145801	.	-	.	Parent=CGI_10006472;
	scaffold42252	TRF	Tandem_Repeat	145734	145801	136	+	.	.
scaffold42252	subtractBed	intrn	145913	145937	.	-	.	Parent=CGI_10006472;
	scaffold42252	TRF	Tandem_Repeat	145913	145937	50	+	.	.
scaffold42252	subtractBed	intrn	148532	148657	.	-	.	Parent=CGI_10006472;
	scaffold42252	TRF	Tandem_Repeat	148532	148657	82	+	.	.
scaffold42264	subtractBed	intrn	6609	6663	.	-	.	Parent=CGI_10006516;
	scaffold42264	TRF	Tandem_Repeat	6609	6663	110	+	.	.
scaffold42264	subtractBed	intrn	8485	8691	.	-	.	Parent=CGI_10006516;
	scaffold42264	TRF	Tandem_Repeat	8485	8691	414	+	.	.
scaffold42264	subtractBed	intrn	9944	9969	.	-	.	Parent=CGI_10006516;
	scaffold42264	TRF	Tandem_Repeat	9944	9969	52	+	.	.
scaffold42264	subtractBed	intrn	10264	10298	.	-	.	Parent=CGI_10006516;
	scaffold42264	TRF	Tandem_Repeat	10264	10298	70	+	.	.
scaffold42264	subtractBed	intrn	77648	77872	.	+	.	Parent=CGI_10006519;
	scaffold42264	WUBlastX	LINE_L2	77375	77872	76	+	.	.
scaffold42264	subtractBed	intrn	77648	77944	.	+	.	Parent=CGI_10006519;
	scaffold42264	WUBlastX	LINE_L2	77495	77944	47	+	.	.
scaffold42268	subtractBed	intrn	1927	2006	.	-	.	Parent=CGI_10006558;
	scaffold42268	TRF	Tandem_Repeat	1927	2006	112	+	.	.
scaffold42268	subtractBed	intrn	1934	2002	.	-	.	Parent=CGI_10006558;
	scaffold42268	TRF	Tandem_Repeat	1934	2002	74	+	.	.
scaffold42268	subtractBed	intrn	1930	2007	.	-	.	Parent=CGI_10006558;
	scaffold42268	TRF	Tandem_Repeat	1930	2007	76	+	.	.
scaffold42268	subtractBed	intrn	127878	128183	.	+	.	Parent=CGI_10006563;
	scaffold42268	WUBlastX	DNA_TcMar-Tc1	127878	128183	42	+	.	.
scaffold42274	subtractBed	intrn	10945	11100	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	10945	11100	131	-	.	.
scaffold42274	subtractBed	intrn	10319	10537	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	10319	10537	121	-	.	.
scaffold42274	subtractBed	intrn	12507	12635	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	12507	12635	86	-	.	.
scaffold42274	subtractBed	intrn	12912	13658	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	12912	13658	518	-	.	.
scaffold42274	subtractBed	intrn	11875	11988	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	11875	11988	79	-	.	.
scaffold42274	subtractBed	intrn	11459	11650	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	11459	11650	82	-	.	.
scaffold42274	subtractBed	intrn	11905	12012	.	-	.	Parent=CGI_10006509;
	scaffold42274	WUBlastX	DNA_hAT	11905	12012	71	-	.	.
scaffold42274	subtractBed	intrn	58010	58055	.	+	.	Parent=CGI_10006512;
	scaffold42274	TRF	Tandem_Repeat	58010	58055	65	+	.	.
scaffold42274	subtractBed	intrn	62498	62626	.	+	.	Parent=CGI_10006512;
	scaffold42274	WUBlastX	LINE_RTE-BovB	62498	62626	38	-	.	.
scaffold42302	subtractBed	intrn	18884	18918	.	-	.	Parent=CGI_10006565;
	scaffold42302	TRF	Tandem_Repeat	18884	18918	52	+	.	.
scaffold42302	subtractBed	intrn	39094	39138	.	-	.	Parent=CGI_10006567;
	scaffold42302	TRF	Tandem_Repeat	39094	39138	72	+	.	.
scaffold42302	subtractBed	intrn	74754	74789	.	+	.	Parent=CGI_10006570;
	scaffold42302	TRF	Tandem_Repeat	74754	74789	72	+	.	.
scaffold42302	subtractBed	intrn	147949	148280	.	-	.	Parent=CGI_10006575;
	scaffold42302	TRF	Tandem_Repeat	147949	148295	369	+	.	.
scaffold42306	subtractBed	intrn	59202	59619	.	+	.	Parent=CGI_10006607;
	scaffold42306	TRF	Tandem_Repeat	59202	59619	487	+	.	.
scaffold42306	subtractBed	intrn	71329	71793	.	+	.	Parent=CGI_10006607;
	scaffold42306	TRF	Tandem_Repeat	71329	71793	750	+	.	.
scaffold42306	subtractBed	intrn	92243	92350	.	-	.	Parent=CGI_10006610;
	scaffold42306	TRF	Tandem_Repeat	92243	92350	94	+	.	.
scaffold42306	subtractBed	intrn	92239	92350	.	-	.	Parent=CGI_10006610;
	scaffold42306	TRF	Tandem_Repeat	92239	92350	116	+	.	.
scaffold42306	subtractBed	intrn	93827	94085	.	-	.	Parent=CGI_10006610;
	scaffold42306	TRF	Tandem_Repeat	93827	94085	421	+	.	.
scaffold42306	subtractBed	intrn	101357	101432	.	-	.	Parent=CGI_10006610;
	scaffold42306	TRF	Tandem_Repeat	101357	101432	116	+	.	.
scaffold42306	subtractBed	intrn	101782	102182	.	-	.	Parent=CGI_10006610;
	scaffold42306	TRF	Tandem_Repeat	101782	102182	721	+	.	.
scaffold42306	subtractBed	intrn	123483	123761	.	+	.	Parent=CGI_10006611;
	scaffold42306	WUBlastX	LTR_DIRS	123483	123761	52	-	.	.
scaffold42306	subtractBed	intrn	123483	123716	.	+	.	Parent=CGI_10006611;
	scaffold42306	WUBlastX	LTR_DIRS	123483	123716	69	-	.	.
scaffold42306	subtractBed	intrn	124428	124484	.	+	.	Parent=CGI_10006611;
	scaffold42306	TRF	Tandem_Repeat	124428	124484	114	+	.	.
scaffold42306	subtractBed	intrn	137611	137641	.	+	.	Parent=CGI_10006611;
	scaffold42306	TRF	Tandem_Repeat	137611	137641	62	+	.	.
scaffold42306	subtractBed	intrn	146298	146338	.	+	.	Parent=CGI_10006611;
	scaffold42306	TRF	Tandem_Repeat	146298	146338	55	+	.	.
scaffold42326	subtractBed	intrn	72088	72285	.	+	.	Parent=CGI_10006692;
	scaffold42326	WUBlastX	LINE_RTE-BovB	72088	72285	106	-	.	.
scaffold42326	subtractBed	intrn	88790	88824	.	-	.	Parent=CGI_10006693;
	scaffold42326	TRF	Tandem_Repeat	88790	88824	70	+	.	.
scaffold42326	subtractBed	intrn	88822	88893	.	-	.	Parent=CGI_10006693;
	scaffold42326	TRF	Tandem_Repeat	88822	88893	144	+	.	.
scaffold42326	subtractBed	intrn	127936	127979	.	-	.	Parent=CGI_10006698;
	scaffold42326	TRF	Tandem_Repeat	127936	127979	88	+	.	.
scaffold42326	subtractBed	intrn	139428	139454	.	-	.	Parent=CGI_10006698;
	scaffold42326	TRF	Tandem_Repeat	139428	139454	54	+	.	.
scaffold42328	subtractBed	intrn	4007	5455	.	-	.	Parent=CGI_10006547;
	scaffold42328	TRF	Tandem_Repeat	4007	5455	2109	+	.	.
scaffold42328	subtractBed	intrn	30699	30887	.	+	.	Parent=CGI_10006549;
	scaffold42328	WUBlastX	LINE_RTE-X	30699	30887	82	-	.	.
scaffold42328	subtractBed	intrn	30738	30893	.	+	.	Parent=CGI_10006549;
	scaffold42328	WUBlastX	LINE_RTE-X	30738	30893	98	-	.	.
scaffold42328	subtractBed	intrn	30735	30935	.	+	.	Parent=CGI_10006549;
	scaffold42328	WUBlastX	LINE_RTE-X	30735	30935	43	-	.	.
scaffold42328	subtractBed	intrn	47530	47581	.	-	.	Parent=CGI_10006551;
	scaffold42328	TRF	Tandem_Repeat	47530	47581	52	+	.	.
scaffold42328	subtractBed	intrn	47818	47890	.	-	.	Parent=CGI_10006551;
	scaffold42328	TRF	Tandem_Repeat	47818	47890	146	+	.	.
scaffold42328	subtractBed	intrn	60134	60213	.	+	.	Parent=CGI_10006553;
	scaffold42328	TRF	Tandem_Repeat	60134	60213	151	+	.	.
scaffold42328	subtractBed	intrn	61534	61576	.	+	.	Parent=CGI_10006553;
	scaffold42328	TRF	Tandem_Repeat	61534	61576	59	+	.	.
scaffold42328	subtractBed	intrn	61534	61576	.	+	.	Parent=CGI_10006553;
	scaffold42328	TRF	Tandem_Repeat	61534	61576	50	+	.	.
scaffold42328	subtractBed	intrn	78855	79613	.	+	.	Parent=CGI_10006554;
	scaffold42328	WUBlastX	LINE_RTE-X	78855	79613	141	-	.	.
scaffold42328	subtractBed	intrn	90697	91155	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	90697	91155	756	+	.	.
scaffold42328	subtractBed	intrn	92644	93694	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	92644	93694	879	+	.	.
scaffold42328	subtractBed	intrn	92644	93521	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	92644	93521	1035	+	.	.
scaffold42328	subtractBed	intrn	92644	93691	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	92644	93691	1271	+	.	.
scaffold42328	subtractBed	intrn	93647	93706	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	93647	93706	61	+	.	.
scaffold42328	subtractBed	intrn	100400	100543	.	+	.	Parent=CGI_10006555;
	scaffold42328	TRF	Tandem_Repeat	100382	100543	261	+	.	.
scaffold42328	subtractBed	intrn	114055	114254	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	114055	114254	343	+	.	.
scaffold42328	subtractBed	intrn	117143	118387	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	117143	118393	999	+	.	.
scaffold42328	subtractBed	intrn	117160	117681	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	117160	117681	486	+	.	.
scaffold42328	subtractBed	intrn	117143	118387	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	117143	118393	871	+	.	.
scaffold42328	subtractBed	intrn	117643	118387	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	117643	118388	835	+	.	.
scaffold42328	subtractBed	intrn	120472	121005	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	120472	121005	753	+	.	.
scaffold42328	subtractBed	intrn	122821	122870	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	122821	122870	100	+	.	.
scaffold42328	subtractBed	intrn	129057	129145	.	-	.	Parent=CGI_10006556;
	scaffold42328	TRF	Tandem_Repeat	129057	129145	79	+	.	.
scaffold42328	subtractBed	intrn	138468	138634	.	+	.	Parent=CGI_10006557;
	scaffold42328	TRF	Tandem_Repeat	138468	138634	228	+	.	.
scaffold42348	subtractBed	intrn	48922	49028	.	+	.	Parent=CGI_10006678;
	scaffold42348	WUBlastX	LTR_Gypsy	48922	49119	28	-	.	.
scaffold42348	subtractBed	intrn	49101	49119	.	+	.	Parent=CGI_10006678;
	scaffold42348	WUBlastX	LTR_Gypsy	48922	49119	28	-	.	.
scaffold42348	subtractBed	intrn	50442	50498	.	+	.	Parent=CGI_10006678;
	scaffold42348	TRF	Tandem_Repeat	50442	50498	50	+	.	.
scaffold42348	subtractBed	intrn	61908	61948	.	-	.	Parent=CGI_10006680;
	scaffold42348	TRF	Tandem_Repeat	61908	61948	59	+	.	.
scaffold42348	subtractBed	intrn	82277	82350	.	+	.	Parent=CGI_10006682;
	scaffold42348	TRF	Tandem_Repeat	82277	82350	116	+	.	.
scaffold42348	subtractBed	intrn	86619	86652	.	+	.	Parent=CGI_10006682;
	scaffold42348	TRF	Tandem_Repeat	86619	86652	52	+	.	.
scaffold42348	subtractBed	intrn	97789	97855	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	97789	97855	80	+	.	.
scaffold42348	subtractBed	intrn	100244	100292	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	100244	100292	98	+	.	.
scaffold42348	subtractBed	intrn	100480	100512	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	100480	100512	66	+	.	.
scaffold42348	subtractBed	intrn	100510	100543	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	100510	100543	68	+	.	.
scaffold42348	subtractBed	intrn	101038	101104	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	101038	101104	89	+	.	.
scaffold42348	subtractBed	intrn	101640	101801	.	-	.	Parent=CGI_10006683;
	scaffold42348	WUBlastX	LINE_RTE-X	101640	101801	70	-	.	.
scaffold42348	subtractBed	intrn	101933	102739	.	-	.	Parent=CGI_10006683;
	scaffold42348	WUBlastX	LINE_RTE-X	101933	102739	84	-	.	.
scaffold42348	subtractBed	intrn	101837	102529	.	-	.	Parent=CGI_10006683;
	scaffold42348	WUBlastX	LINE_RTE-X	101837	102529	305	-	.	.
scaffold42348	subtractBed	intrn	101741	102616	.	-	.	Parent=CGI_10006683;
	scaffold42348	WUBlastX	LINE_RTE-X	101741	102616	224	-	.	.
scaffold42348	subtractBed	intrn	101194	101268	.	-	.	Parent=CGI_10006683;
	scaffold42348	WUBlastX	LINE_RTE-X	101194	101268	27	-	.	.
scaffold42348	subtractBed	intrn	106886	106928	.	-	.	Parent=CGI_10006683;
	scaffold42348	TRF	Tandem_Repeat	106886	106928	86	+	.	.
scaffold42348	subtractBed	intrn	145193	145292	.	-	.	Parent=CGI_10006686;
	scaffold42348	TRF	Tandem_Repeat	145193	145292	173	+	.	.
scaffold42348	subtractBed	intrn	146895	146933	.	-	.	Parent=CGI_10006686;
	scaffold42348	TRF	Tandem_Repeat	146895	146933	78	+	.	.
scaffold42348	subtractBed	intrn	148266	148294	.	-	.	Parent=CGI_10006686;
	scaffold42348	TRF	Tandem_Repeat	148266	148294	58	+	.	.
scaffold42348	subtractBed	intrn	151280	151309	.	-	.	Parent=CGI_10006686;
	scaffold42348	TRF	Tandem_Repeat	151280	151309	60	+	.	.
scaffold42348	subtractBed	intrn	147382	147495	.	-	.	Parent=CGI_10006686;
	scaffold42348	TRF	Tandem_Repeat	147382	147495	201	+	.	.
scaffold42364	subtractBed	intrn	22971	23945	.	-	.	Parent=CGI_10006717;
	scaffold42364	WUBlastX	DNA_TcMar-Tc1	22971	23945	432	-	.	.
scaffold42364	subtractBed	intrn	48243	48988	.	-	.	Parent=CGI_10006721;
	scaffold42364	TRF	Tandem_Repeat	48243	48988	488	+	.	.
scaffold42364	subtractBed	intrn	55022	55162	.	-	.	Parent=CGI_10006721;
	scaffold42364	TRF	Tandem_Repeat	55022	55176	118	+	.	.
scaffold42364	subtractBed	intrn	64773	64814	.	-	.	Parent=CGI_10006721;
	scaffold42364	TRF	Tandem_Repeat	64773	64814	84	+	.	.
scaffold42364	subtractBed	intrn	71835	71873	.	-	.	Parent=CGI_10006721;
	scaffold42364	TRF	Tandem_Repeat	71835	71873	78	+	.	.
scaffold42364	subtractBed	intrn	72030	72085	.	-	.	Parent=CGI_10006721;
	scaffold42364	TRF	Tandem_Repeat	72030	72085	112	+	.	.
scaffold42364	subtractBed	intrn	48243	48988	.	+	.	Parent=CGI_10006722;
	scaffold42364	TRF	Tandem_Repeat	48243	48988	488	+	.	.
scaffold42364	subtractBed	intrn	55022	55162	.	+	.	Parent=CGI_10006722;
	scaffold42364	TRF	Tandem_Repeat	55022	55176	118	+	.	.
scaffold42364	subtractBed	intrn	74783	74808	.	+	.	Parent=CGI_10006723;
	scaffold42364	TRF	Tandem_Repeat	74783	74808	52	+	.	.
scaffold42364	subtractBed	intrn	76019	76240	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_CR1-L2	76019	76240	106	-	.	.
scaffold42364	subtractBed	intrn	74842	76011	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_L2	74842	76011	277	-	.	.
scaffold42364	subtractBed	intrn	76007	76186	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_L2	76007	76186	110	-	.	.
scaffold42364	subtractBed	intrn	76004	76306	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_CR1-L2	76004	76306	85	-	.	.
scaffold42364	subtractBed	intrn	74217	75479	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_L2	74217	75479	188	-	.	.
scaffold42364	subtractBed	intrn	76010	76390	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_Rex-Babar	76010	76390	35	-	.	.
scaffold42364	subtractBed	intrn	74166	74375	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_L2	74166	74375	31	-	.	.
scaffold42364	subtractBed	intrn	73859	74110	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_CR1-L2	73859	74110	36	-	.	.
scaffold42364	subtractBed	intrn	74590	76053	.	+	.	Parent=CGI_10006723;
	scaffold42364	WUBlastX	LINE_CR1-L2	74590	76053	189	-	.	.
scaffold42364	subtractBed	intrn	78047	78082	.	+	.	Parent=CGI_10006723;
	scaffold42364	TRF	Tandem_Repeat	78047	78082	72	+	.	.
scaffold42364	subtractBed	intrn	85787	85823	.	+	.	Parent=CGI_10006723;
	scaffold42364	TRF	Tandem_Repeat	85787	85823	74	+	.	.
scaffold42364	subtractBed	intrn	87164	87188	.	+	.	Parent=CGI_10006723;
	scaffold42364	TRF	Tandem_Repeat	87164	87188	50	+	.	.
scaffold42364	subtractBed	intrn	87258	87298	.	+	.	Parent=CGI_10006723;
	scaffold42364	TRF	Tandem_Repeat	87258	87298	82	+	.	.
scaffold42364	subtractBed	intrn	124459	124494	.	+	.	Parent=CGI_10006727;
	scaffold42364	TRF	Tandem_Repeat	124459	124494	63	+	.	.
scaffold42364	subtractBed	intrn	134203	134617	.	-	.	Parent=CGI_10006728;
	scaffold42364	TRF	Tandem_Repeat	134203	134617	568	+	.	.
scaffold42364	subtractBed	intrn	141456	142567	.	-	.	Parent=CGI_10006728;
	scaffold42364	TRF	Tandem_Repeat	141456	142567	1763	+	.	.
scaffold42364	subtractBed	intrn	145231	145290	.	-	.	Parent=CGI_10006728;
	scaffold42364	TRF	Tandem_Repeat	145231	145290	52	+	.	.
scaffold42366	subtractBed	intrn	34084	34134	.	+	.	Parent=CGI_10006699;
	scaffold42366	TRF	Tandem_Repeat	34084	34134	93	+	.	.
scaffold42366	subtractBed	intrn	34535	34577	.	+	.	Parent=CGI_10006699;
	scaffold42366	TRF	Tandem_Repeat	34535	34577	86	+	.	.
scaffold42366	subtractBed	intrn	36496	36741	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	LINE_L1-Tx1	36496	36741	34	-	.	.
scaffold42366	subtractBed	intrn	36538	36741	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	LINE_L1-Tx1	36538	36741	47	-	.	.
scaffold42366	subtractBed	intrn	50024	50094	.	+	.	Parent=CGI_10006699;
	scaffold42366	TRF	Tandem_Repeat	50024	50094	142	+	.	.
scaffold42366	subtractBed	intrn	67468	67755	.	+	.	Parent=CGI_10006699;
	scaffold42366	TRF	Tandem_Repeat	67468	67755	495	+	.	.
scaffold42366	subtractBed	intrn	72798	73394	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	72798	73394	394	+	.	.
scaffold42366	subtractBed	intrn	71295	71453	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	71295	71453	88	+	.	.
scaffold42366	subtractBed	intrn	74654	74663	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	74654	74950	144	+	.	.
scaffold42366	subtractBed	intrn	74949	74950	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	74654	74950	144	+	.	.
scaffold42366	subtractBed	intrn	75580	75609	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	75580	75822	45	+	.	.
scaffold42366	subtractBed	intrn	75976	75979	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	75976	76083	25	+	.	.
scaffold42366	subtractBed	intrn	75788	75822	.	+	.	Parent=CGI_10006699;
	scaffold42366	WUBlastX	DNA_hAT	75580	75822	45	+	.	.
scaffold42366	subtractBed	intrn	93714	93817	.	+	.	Parent=CGI_10006701;
	scaffold42366	TRF	Tandem_Repeat	93714	93817	163	+	.	.
scaffold42366	subtractBed	intrn	106157	106205	.	+	.	Parent=CGI_10006702;
	scaffold42366	TRF	Tandem_Repeat	106157	106205	98	+	.	.
scaffold42366	subtractBed	intrn	110514	110539	.	+	.	Parent=CGI_10006702;
	scaffold42366	TRF	Tandem_Repeat	110514	110539	52	+	.	.
scaffold42366	subtractBed	intrn	131892	131935	.	+	.	Parent=CGI_10006704;
	scaffold42366	TRF	Tandem_Repeat	131892	131935	88	+	.	.
scaffold42366	subtractBed	intrn	155359	155411	.	+	.	Parent=CGI_10006704;
	scaffold42366	TRF	Tandem_Repeat	155359	155411	88	+	.	.
scaffold42366	subtractBed	intrn	155359	155414	.	+	.	Parent=CGI_10006704;
	scaffold42366	TRF	Tandem_Repeat	155359	155414	58	+	.	.
scaffold42366	subtractBed	intrn	155365	155414	.	+	.	Parent=CGI_10006704;
	scaffold42366	TRF	Tandem_Repeat	155365	155414	73	+	.	.
scaffold42372	subtractBed	intrn	145779	145828	.	+	.	Parent=CGI_10006546;
	scaffold42372	TRF	Tandem_Repeat	145779	145828	100	+	.	.
scaffold42380	subtractBed	intrn	3838	3904	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	3838	3904	89	+	.	.
scaffold42380	subtractBed	intrn	4368	4403	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	4368	4403	63	+	.	.
scaffold42380	subtractBed	intrn	4401	4429	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	4401	4429	58	+	.	.
scaffold42380	subtractBed	intrn	6899	6951	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	6899	6951	79	+	.	.
scaffold42380	subtractBed	intrn	24819	24864	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	24819	24864	92	+	.	.
scaffold42380	subtractBed	intrn	24868	24918	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	24868	24918	68	+	.	.
scaffold42380	subtractBed	intrn	27683	27921	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	27683	27921	289	+	.	.
scaffold42380	subtractBed	intrn	27683	27921	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	27683	27921	289	+	.	.
scaffold42380	subtractBed	intrn	28567	28765	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	28567	28765	238	+	.	.
scaffold42380	subtractBed	intrn	29442	29567	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	29442	29567	171	+	.	.
scaffold42380	subtractBed	intrn	29450	29551	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	29450	29551	127	+	.	.
scaffold42380	subtractBed	intrn	32279	32322	.	+	.	Parent=CGI_10006729;
	scaffold42380	TRF	Tandem_Repeat	32279	32322	79	+	.	.
scaffold42380	subtractBed	intrn	83871	83924	.	+	.	Parent=CGI_10006731;
	scaffold42380	TRF	Tandem_Repeat	83871	83924	90	+	.	.
scaffold42380	subtractBed	intrn	86051	86094	.	+	.	Parent=CGI_10006731;
	scaffold42380	TRF	Tandem_Repeat	86051	86094	88	+	.	.
scaffold42380	subtractBed	intrn	89006	89049	.	+	.	Parent=CGI_10006731;
	scaffold42380	TRF	Tandem_Repeat	89006	89049	88	+	.	.
scaffold42380	subtractBed	intrn	92802	93017	.	+	.	Parent=CGI_10006731;
	scaffold42380	WUBlastX	LINE_RTE-X	92802	93017	53	-	.	.
scaffold42380	subtractBed	intrn	96160	96234	.	+	.	Parent=CGI_10006731;
	scaffold42380	TRF	Tandem_Repeat	96160	96234	127	+	.	.
scaffold42380	subtractBed	intrn	106800	106853	.	+	.	Parent=CGI_10006731;
	scaffold42380	TRF	Tandem_Repeat	106800	106853	108	+	.	.
scaffold42380	subtractBed	intrn	129068	129512	.	-	.	Parent=CGI_10006733;
	scaffold42380	TRF	Tandem_Repeat	129068	129512	505	+	.	.
scaffold42390	subtractBed	intrn	9196	9236	.	-	.	Parent=CGI_10006753;
	scaffold42390	TRF	Tandem_Repeat	9196	9236	82	+	.	.
scaffold42392	subtractBed	intrn	77852	77907	.	-	.	Parent=CGI_10006782;
	scaffold42392	TRF	Tandem_Repeat	77852	77907	112	+	.	.
scaffold42392	subtractBed	intrn	93184	93236	.	+	.	Parent=CGI_10006784;
	scaffold42392	TRF	Tandem_Repeat	93184	93236	97	+	.	.
scaffold42392	subtractBed	intrn	94061	94104	.	+	.	Parent=CGI_10006784;
	scaffold42392	TRF	Tandem_Repeat	94061	94104	88	+	.	.
scaffold42392	subtractBed	intrn	109732	109804	.	+	.	Parent=CGI_10006785;
	scaffold42392	TRF	Tandem_Repeat	109732	109804	68	+	.	.
scaffold42392	subtractBed	intrn	109734	109804	.	+	.	Parent=CGI_10006785;
	scaffold42392	TRF	Tandem_Repeat	109734	109804	78	+	.	.
scaffold42392	subtractBed	intrn	114159	114221	.	+	.	Parent=CGI_10006785;
	scaffold42392	TRF	Tandem_Repeat	114159	114221	90	+	.	.
scaffold42392	subtractBed	intrn	114378	114668	.	+	.	Parent=CGI_10006785;
	scaffold42392	WUBlastX	LINE_L2	114378	114668	35	-	.	.
scaffold42392	subtractBed	intrn	114330	114722	.	+	.	Parent=CGI_10006785;
	scaffold42392	WUBlastX	LINE_CR1-L2	114330	114722	30	-	.	.
scaffold42392	subtractBed	intrn	148067	148840	.	+	.	Parent=CGI_10006786;
	scaffold42392	WUBlastX	LTR_Gypsy-Cigr	148067	148840	292	-	.	.
scaffold42392	subtractBed	intrn	147507	148058	.	+	.	Parent=CGI_10006786;
	scaffold42392	WUBlastX	LTR_Gypsy-Cigr	147507	148058	150	-	.	.
scaffold42392	subtractBed	intrn	147606	148058	.	+	.	Parent=CGI_10006786;
	scaffold42392	WUBlastX	LTR_Gypsy	147606	148058	170	-	.	.
scaffold42392	subtractBed	intrn	148208	149065	.	+	.	Parent=CGI_10006786;
	scaffold42392	WUBlastX	LTR_Gypsy	148208	149065	23	-	.	.
scaffold424	subtractBed	intrn	47470	48634	.	-	.	Parent=CGI_10014352;
	scaffold424	TRF	Tandem_Repeat	47470	48634	1596	+	.	.
scaffold424	subtractBed	intrn	53452	53487	.	-	.	Parent=CGI_10014352;
	scaffold424	TRF	Tandem_Repeat	53452	53487	54	+	.	.
scaffold424	subtractBed	intrn	94951	95172	.	-	.	Parent=CGI_10014353;
	scaffold424	WUBlastX	DNA_hAT-Ac	94951	95172	20	+	.	.
scaffold424	subtractBed	intrn	95241	95372	.	-	.	Parent=CGI_10014353;
	scaffold424	WUBlastX	DNA_hAT-Ac	95241	95372	35	+	.	.
scaffold424	subtractBed	intrn	94421	94936	.	-	.	Parent=CGI_10014353;
	scaffold424	WUBlastX	DNA_hAT-Ac	94421	94936	52	+	.	.
scaffold424	subtractBed	intrn	95119	95166	.	-	.	Parent=CGI_10014353;
	scaffold424	WUBlastX	DNA_hAT-Ac	95119	95166	24	+	.	.
scaffold424	subtractBed	intrn	94424	94828	.	-	.	Parent=CGI_10014353;
	scaffold424	WUBlastX	DNA_hAT-Ac	94424	94828	89	+	.	.
scaffold424	subtractBed	intrn	98408	98461	.	-	.	Parent=CGI_10014353;
	scaffold424	TRF	Tandem_Repeat	98408	98461	63	+	.	.
scaffold424	subtractBed	intrn	125093	125746	.	-	.	Parent=CGI_10014354;
	scaffold424	WUBlastX	DNA_Kolobok	125093	125746	51	-	.	.
scaffold424	subtractBed	intrn	125057	125233	.	-	.	Parent=CGI_10014354;
	scaffold424	WUBlastX	DNA_Kolobok-Hyd	125057	125233	51	-	.	.
scaffold424	subtractBed	intrn	125537	125878	.	-	.	Parent=CGI_10014354;
	scaffold424	WUBlastX	DNA_Kolobok-Hyd	125537	125878	69	-	.	.
scaffold424	subtractBed	intrn	166197	166240	.	+	.	Parent=CGI_10014358;
	scaffold424	TRF	Tandem_Repeat	166197	166240	88	+	.	.
scaffold424	subtractBed	intrn	208881	208949	.	-	.	Parent=CGI_10014360;
	scaffold424	TRF	Tandem_Repeat	208881	208949	84	+	.	.
scaffold424	subtractBed	intrn	208881	208949	.	-	.	Parent=CGI_10014360;
	scaffold424	TRF	Tandem_Repeat	208881	208949	93	+	.	.
scaffold424	subtractBed	intrn	222070	222113	.	+	.	Parent=CGI_10014361;
	scaffold424	TRF	Tandem_Repeat	222070	222113	52	+	.	.
scaffold424	subtractBed	intrn	222071	222132	.	+	.	Parent=CGI_10014361;
	scaffold424	TRF	Tandem_Repeat	222071	222132	62	+	.	.
scaffold424	subtractBed	intrn	239240	239318	.	-	.	Parent=CGI_10014362;
	scaffold424	TRF	Tandem_Repeat	239240	239318	86	+	.	.
scaffold424	subtractBed	intrn	306174	306308	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	306174	306308	252	+	.	.
scaffold424	subtractBed	intrn	306180	306301	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	306180	306301	70	+	.	.
scaffold424	subtractBed	intrn	314281	314324	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	314281	314324	56	+	.	.
scaffold424	subtractBed	intrn	314281	314324	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	314281	314324	56	+	.	.
scaffold424	subtractBed	intrn	317589	317620	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	317589	317620	64	+	.	.
scaffold424	subtractBed	intrn	321659	321688	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	321659	321688	51	+	.	.
scaffold424	subtractBed	intrn	334465	334508	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	334465	334508	70	+	.	.
scaffold424	subtractBed	intrn	339304	339387	.	-	.	Parent=CGI_10014369;
	scaffold424	TRF	Tandem_Repeat	339304	339387	152	+	.	.
scaffold42402	subtractBed	intrn	41258	41516	.	-	.	Parent=CGI_10006790;
	scaffold42402	TRF	Tandem_Repeat	41258	41516	245	+	.	.
scaffold42402	subtractBed	intrn	43149	43710	.	-	.	Parent=CGI_10006790;
	scaffold42402	TRF	Tandem_Repeat	43149	43722	837	+	.	.
scaffold42402	subtractBed	intrn	44617	44922	.	-	.	Parent=CGI_10006790;
	scaffold42402	TRF	Tandem_Repeat	44617	44922	277	+	.	.
scaffold42402	subtractBed	intrn	48917	49838	.	-	.	Parent=CGI_10006790;
	scaffold42402	TRF	Tandem_Repeat	48917	49838	1251	+	.	.
scaffold42402	subtractBed	intrn	53896	54295	.	+	.	Parent=CGI_10006791;
	scaffold42402	TRF	Tandem_Repeat	53896	54295	349	+	.	.
scaffold42402	subtractBed	intrn	55754	55893	.	+	.	Parent=CGI_10006791;
	scaffold42402	TRF	Tandem_Repeat	55754	55893	217	+	.	.
scaffold42402	subtractBed	intrn	70611	71140	.	-	.	Parent=CGI_10006792;
	scaffold42402	TRF	Tandem_Repeat	70611	71140	851	+	.	.
scaffold42402	subtractBed	intrn	77971	78293	.	-	.	Parent=CGI_10006792;
	scaffold42402	TRF	Tandem_Repeat	77971	78293	592	+	.	.
scaffold42402	subtractBed	intrn	97568	97722	.	+	.	Parent=CGI_10006793;
	scaffold42402	TRF	Tandem_Repeat	97568	97722	199	+	.	.
scaffold42402	subtractBed	intrn	99443	99509	.	+	.	Parent=CGI_10006793;
	scaffold42402	TRF	Tandem_Repeat	99443	99509	120	+	.	.
scaffold42402	subtractBed	intrn	101556	101742	.	+	.	Parent=CGI_10006793;
	scaffold42402	TRF	Tandem_Repeat	101526	101742	368	+	.	.
scaffold42402	subtractBed	intrn	104326	104749	.	+	.	Parent=CGI_10006793;
	scaffold42402	TRF	Tandem_Repeat	104326	104749	512	+	.	.
scaffold42402	subtractBed	intrn	104326	104719	.	+	.	Parent=CGI_10006793;
	scaffold42402	TRF	Tandem_Repeat	104326	104719	465	+	.	.
scaffold42402	subtractBed	intrn	116507	116729	.	-	.	Parent=CGI_10006794;
	scaffold42402	TRF	Tandem_Repeat	116507	116729	306	+	.	.
scaffold42402	subtractBed	intrn	120113	121867	.	-	.	Parent=CGI_10006794;
	scaffold42402	TRF	Tandem_Repeat	120113	121867	1944	+	.	.
scaffold42402	subtractBed	intrn	121178	121484	.	-	.	Parent=CGI_10006794;
	scaffold42402	TRF	Tandem_Repeat	121178	121484	186	+	.	.
scaffold42402	subtractBed	intrn	130059	130262	.	-	.	Parent=CGI_10006795;
	scaffold42402	WUBlastX	LINE_RTE-X	130059	130262	68	+	.	.
scaffold42402	subtractBed	intrn	129965	130099	.	-	.	Parent=CGI_10006795;
	scaffold42402	WUBlastX	LINE_RTE-X	129965	130099	39	+	.	.
scaffold42402	subtractBed	intrn	131188	131244	.	-	.	Parent=CGI_10006795;
	scaffold42402	WUBlastX	LINE_RTE-X	131188	131244	28	+	.	.
scaffold42402	subtractBed	intrn	131167	131223	.	-	.	Parent=CGI_10006795;
	scaffold42402	WUBlastX	LINE_RTE-X	131167	131223	44	+	.	.
scaffold42402	subtractBed	intrn	131009	131158	.	-	.	Parent=CGI_10006795;
	scaffold42402	WUBlastX	LINE_RTE-X	131009	131158	86	+	.	.
scaffold42402	subtractBed	intrn	130059	130262	.	+	.	Parent=CGI_10006796;
	scaffold42402	WUBlastX	LINE_RTE-X	130059	130262	68	+	.	.
scaffold42402	subtractBed	intrn	129965	130099	.	+	.	Parent=CGI_10006796;
	scaffold42402	WUBlastX	LINE_RTE-X	129965	130099	39	+	.	.
scaffold42402	subtractBed	intrn	131188	131244	.	+	.	Parent=CGI_10006796;
	scaffold42402	WUBlastX	LINE_RTE-X	131188	131244	28	+	.	.
scaffold42402	subtractBed	intrn	131167	131223	.	+	.	Parent=CGI_10006796;
	scaffold42402	WUBlastX	LINE_RTE-X	131167	131223	44	+	.	.
scaffold42402	subtractBed	intrn	131009	131158	.	+	.	Parent=CGI_10006796;
	scaffold42402	WUBlastX	LINE_RTE-X	131009	131158	86	+	.	.
scaffold42408	subtractBed	intrn	112779	113108	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	112779	113108	91	+	.	.
scaffold42408	subtractBed	intrn	113418	113525	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	113418	113525	22	+	.	.
scaffold42408	subtractBed	intrn	112982	113233	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1	112982	113233	71	+	.	.
scaffold42408	subtractBed	intrn	112851	113072	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	112851	113072	94	+	.	.
scaffold42408	subtractBed	intrn	113436	113525	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	113436	113525	31	+	.	.
scaffold42408	subtractBed	intrn	112656	113069	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1	112656	113069	54	+	.	.
scaffold42408	subtractBed	intrn	113084	113272	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	113084	113272	60	+	.	.
scaffold42408	subtractBed	intrn	113042	113380	.	-	.	Parent=CGI_10006751;
	scaffold42408	WUBlastX	LINE_L1-Tx1	113042	113380	46	+	.	.
scaffold42422	subtractBed	intrn	15003	15099	.	+	.	Parent=CGI_10006848;
	scaffold42422	TRF	Tandem_Repeat	15003	15099	180	+	.	.
scaffold42422	subtractBed	intrn	43421	43467	.	+	.	Parent=CGI_10006849;
	scaffold42422	TRF	Tandem_Repeat	43421	43467	85	+	.	.
scaffold42422	subtractBed	intrn	53381	53414	.	-	.	Parent=CGI_10006850;
	scaffold42422	TRF	Tandem_Repeat	53381	53414	50	+	.	.
scaffold42422	subtractBed	intrn	104516	104559	.	+	.	Parent=CGI_10006853;
	scaffold42422	TRF	Tandem_Repeat	104516	104559	79	+	.	.
scaffold42422	subtractBed	intrn	106103	106170	.	+	.	Parent=CGI_10006853;
	scaffold42422	TRF	Tandem_Repeat	106103	106170	70	+	.	.
scaffold42422	subtractBed	intrn	159643	159669	.	-	.	Parent=CGI_10006856;
	scaffold42422	TRF	Tandem_Repeat	159643	159669	54	+	.	.
scaffold42440	subtractBed	intrn	62122	62168	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	62122	62168	76	+	.	.
scaffold42440	subtractBed	intrn	64221	64254	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	64221	64254	59	+	.	.
scaffold42440	subtractBed	intrn	75369	75458	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	75369	75458	144	+	.	.
scaffold42440	subtractBed	intrn	85667	85706	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	85667	85706	80	+	.	.
scaffold42440	subtractBed	intrn	89562	89602	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	89562	89602	82	+	.	.
scaffold42440	subtractBed	intrn	98446	98495	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	98446	98495	100	+	.	.
scaffold42440	subtractBed	intrn	104999	105214	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	104999	105214	143	+	.	.
scaffold42440	subtractBed	intrn	105005	105247	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	105005	105247	215	+	.	.
scaffold42440	subtractBed	intrn	106949	107011	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	106949	107011	54	+	.	.
scaffold42440	subtractBed	intrn	106949	107073	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	106949	107073	80	+	.	.
scaffold42440	subtractBed	intrn	110159	110212	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	110159	110212	56	+	.	.
scaffold42440	subtractBed	intrn	110144	110212	.	+	.	Parent=CGI_10006902;
	scaffold42440	TRF	Tandem_Repeat	110144	110212	50	+	.	.
scaffold42448	subtractBed	intrn	40803	40865	.	+	.	Parent=CGI_10006877;
	scaffold42448	TRF	Tandem_Repeat	40803	40865	54	+	.	.
scaffold42448	subtractBed	intrn	43120	43216	.	+	.	Parent=CGI_10006877;
	scaffold42448	TRF	Tandem_Repeat	43120	43216	59	+	.	.
scaffold42448	subtractBed	intrn	43277	43345	.	+	.	Parent=CGI_10006877;
	scaffold42448	TRF	Tandem_Repeat	43277	43345	57	+	.	.
scaffold42448	subtractBed	intrn	43120	43216	.	-	.	Parent=CGI_10006878;
	scaffold42448	TRF	Tandem_Repeat	43120	43216	59	+	.	.
scaffold42448	subtractBed	intrn	43277	43345	.	-	.	Parent=CGI_10006878;
	scaffold42448	TRF	Tandem_Repeat	43277	43345	57	+	.	.
scaffold42448	subtractBed	intrn	126029	126211	.	-	.	Parent=CGI_10006884;
	scaffold42448	TRF	Tandem_Repeat	126029	126211	280	+	.	.
scaffold42448	subtractBed	intrn	126019	126227	.	-	.	Parent=CGI_10006884;
	scaffold42448	TRF	Tandem_Repeat	126019	126227	201	+	.	.
scaffold42448	subtractBed	intrn	134463	134929	.	-	.	Parent=CGI_10006885;
	scaffold42448	TRF	Tandem_Repeat	134463	134929	727	+	.	.
scaffold42448	subtractBed	intrn	149348	150229	.	+	.	Parent=CGI_10006886;
	scaffold42448	TRF	Tandem_Repeat	149348	150229	1281	+	.	.
scaffold42450	subtractBed	intrn	5199	6219	.	-	.	Parent=CGI_10006895;
	scaffold42450	TRF	Tandem_Repeat	5199	6219	1141	+	.	.
scaffold42450	subtractBed	intrn	22363	22416	.	-	.	Parent=CGI_10006895;
	scaffold42450	TRF	Tandem_Repeat	22363	22416	92	+	.	.
scaffold42450	subtractBed	intrn	75304	75350	.	-	.	Parent=CGI_10006899;
	scaffold42450	TRF	Tandem_Repeat	75304	75350	94	+	.	.
scaffold42466	subtractBed	intrn	11257	12275	.	-	.	Parent=CGI_10006933;
	scaffold42466	TRF	Tandem_Repeat	11257	12275	1040	+	.	.
scaffold42466	subtractBed	intrn	17331	17807	.	-	.	Parent=CGI_10006933;
	scaffold42466	TRF	Tandem_Repeat	17331	17807	664	+	.	.
scaffold42466	subtractBed	intrn	26923	27365	.	-	.	Parent=CGI_10006933;
	scaffold42466	TRF	Tandem_Repeat	26906	27365	787	+	.	.
scaffold42466	subtractBed	intrn	29864	30306	.	-	.	Parent=CGI_10006933;
	scaffold42466	TRF	Tandem_Repeat	29864	30306	635	+	.	.
scaffold42466	subtractBed	intrn	38011	38806	.	+	.	Parent=CGI_10006935;
	scaffold42466	TRF	Tandem_Repeat	38011	38806	1240	+	.	.
scaffold42466	subtractBed	intrn	42212	42494	.	-	.	Parent=CGI_10006936;
	scaffold42466	TRF	Tandem_Repeat	42212	42500	170	+	.	.
scaffold42466	subtractBed	intrn	57919	58381	.	-	.	Parent=CGI_10006937;
	scaffold42466	TRF	Tandem_Repeat	57919	58381	521	+	.	.
scaffold42466	subtractBed	intrn	87093	87143	.	-	.	Parent=CGI_10006938;
	scaffold42466	TRF	Tandem_Repeat	87093	87143	102	+	.	.
scaffold42466	subtractBed	intrn	87187	87236	.	-	.	Parent=CGI_10006938;
	scaffold42466	TRF	Tandem_Repeat	87187	87236	100	+	.	.
scaffold42466	subtractBed	intrn	114798	115046	.	+	.	Parent=CGI_10006942;
	scaffold42466	WUBlastX	LINE_RTE-X	114798	115046	62	+	.	.
scaffold42466	subtractBed	intrn	114795	115088	.	+	.	Parent=CGI_10006942;
	scaffold42466	WUBlastX	LINE_RTE-X	114795	115088	48	+	.	.
scaffold42466	subtractBed	intrn	114642	115049	.	+	.	Parent=CGI_10006942;
	scaffold42466	WUBlastX	LINE_RTE-X	114642	115049	23	+	.	.
scaffold42466	subtractBed	intrn	123339	124010	.	+	.	Parent=CGI_10006942;
	scaffold42466	TRF	Tandem_Repeat	123339	124010	977	+	.	.
scaffold42466	subtractBed	intrn	124369	124575	.	+	.	Parent=CGI_10006942;
	scaffold42466	TRF	Tandem_Repeat	124369	124575	360	+	.	.
scaffold42466	subtractBed	intrn	142017	142100	.	-	.	Parent=CGI_10006943;
	scaffold42466	TRF	Tandem_Repeat	142017	142100	84	+	.	.
scaffold42466	subtractBed	intrn	163700	163755	.	+	.	Parent=CGI_10006945;
	scaffold42466	TRF	Tandem_Repeat	163700	163755	53	+	.	.
scaffold42486	subtractBed	intrn	20823	21010	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	20823	21010	145	+	.	.
scaffold42486	subtractBed	intrn	26255	26425	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	26255	26425	173	+	.	.
scaffold42486	subtractBed	intrn	26255	26425	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	26255	26425	191	+	.	.
scaffold42486	subtractBed	intrn	26425	26562	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	26425	26562	104	+	.	.
scaffold42486	subtractBed	intrn	26752	26886	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	26752	26886	118	+	.	.
scaffold42486	subtractBed	intrn	35221	35295	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	35221	35295	143	+	.	.
scaffold42486	subtractBed	intrn	38347	39010	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	38347	39010	755	+	.	.
scaffold42486	subtractBed	intrn	39238	39437	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	39238	39437	262	+	.	.
scaffold42486	subtractBed	intrn	39239	39462	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	39239	39462	256	+	.	.
scaffold42486	subtractBed	intrn	43668	43730	.	-	.	Parent=CGI_10006975;
	scaffold42486	TRF	Tandem_Repeat	43668	43730	126	+	.	.
scaffold42486	subtractBed	intrn	54989	55257	.	-	.	Parent=CGI_10006976;
	scaffold42486	TRF	Tandem_Repeat	54989	55257	529	+	.	.
scaffold42486	subtractBed	intrn	84003	84175	.	+	.	Parent=CGI_10006978;
	scaffold42486	TRF	Tandem_Repeat	84003	84184	166	+	.	.
scaffold42486	subtractBed	intrn	85795	85836	.	+	.	Parent=CGI_10006978;
	scaffold42486	TRF	Tandem_Repeat	85795	85836	84	+	.	.
scaffold42486	subtractBed	intrn	94557	95702	.	-	.	Parent=CGI_10006979;
	scaffold42486	TRF	Tandem_Repeat	94557	95702	1021	+	.	.
scaffold42486	subtractBed	intrn	94557	95888	.	-	.	Parent=CGI_10006979;
	scaffold42486	TRF	Tandem_Repeat	94557	95888	1015	+	.	.
scaffold42486	subtractBed	intrn	139368	139409	.	-	.	Parent=CGI_10006981;
	scaffold42486	TRF	Tandem_Repeat	139368	139409	84	+	.	.
scaffold42486	subtractBed	intrn	139490	139517	.	-	.	Parent=CGI_10006981;
	scaffold42486	TRF	Tandem_Repeat	139490	139517	56	+	.	.
scaffold42486	subtractBed	intrn	139593	139624	.	-	.	Parent=CGI_10006981;
	scaffold42486	TRF	Tandem_Repeat	139593	139624	55	+	.	.
scaffold42486	subtractBed	intrn	148449	149078	.	-	.	Parent=CGI_10006982;
	scaffold42486	WUBlastX	DNA_TcMar-Tc1	148449	149078	228	+	.	.
scaffold42486	subtractBed	intrn	149068	149301	.	-	.	Parent=CGI_10006982;
	scaffold42486	WUBlastX	DNA_TcMar-Tc1	149068	149301	165	+	.	.
scaffold42486	subtractBed	intrn	148336	148434	.	-	.	Parent=CGI_10006982;
	scaffold42486	WUBlastX	DNA_TcMar-Tc1	148336	148434	29	+	.	.
scaffold42486	subtractBed	intrn	153670	153948	.	-	.	Parent=CGI_10006982;
	scaffold42486	WUBlastX	DNA_Academ	153670	153948	44	-	.	.
scaffold42490	subtractBed	intrn	90255	90286	.	-	.	Parent=CGI_10007004;
	scaffold42490	TRF	Tandem_Repeat	90255	90286	55	+	.	.
scaffold42490	subtractBed	intrn	90315	90364	.	-	.	Parent=CGI_10007004;
	scaffold42490	TRF	Tandem_Repeat	90315	90364	66	+	.	.
scaffold42490	subtractBed	intrn	126951	127000	.	+	.	Parent=CGI_10007005;
	scaffold42490	TRF	Tandem_Repeat	126951	127000	100	+	.	.
scaffold425	subtractBed	intrn	127587	128141	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	127587	128141	199	-	.	.
scaffold425	subtractBed	intrn	128955	129554	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	128955	129554	117	+	.	.
scaffold425	subtractBed	intrn	127016	127192	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	127016	127192	57	+	.	.
scaffold425	subtractBed	intrn	126656	126922	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	126656	126922	40	+	.	.
scaffold425	subtractBed	intrn	127022	127144	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	127022	127144	66	+	.	.
scaffold425	subtractBed	intrn	128047	128349	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	128047	128349	145	-	.	.
scaffold425	subtractBed	intrn	128047	128514	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_Kolobok-IS4	128047	128514	141	-	.	.
scaffold425	subtractBed	intrn	128056	128610	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	128056	128610	136	-	.	.
scaffold425	subtractBed	intrn	129060	129560	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	129060	129560	278	+	.	.
scaffold425	subtractBed	intrn	135792	135953	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	135792	135953	29	+	.	.
scaffold425	subtractBed	intrn	134962	135528	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	134962	135528	253	+	.	.
scaffold425	subtractBed	intrn	136697	137377	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	136697	137377	233	+	.	.
scaffold425	subtractBed	intrn	138118	139476	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	138118	139476	466	-	.	.
scaffold425	subtractBed	intrn	138970	139623	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	138970	139623	114	-	.	.
scaffold425	subtractBed	intrn	136709	137503	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_Kolobok-IS4	136709	137503	187	+	.	.
scaffold425	subtractBed	intrn	136712	137749	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	136712	137749	133	+	.	.
scaffold425	subtractBed	intrn	138124	139272	.	-	.	Parent=CGI_10025975;
	scaffold425	WUBlastX	DNA_IS4EU	138124	139272	728	-	.	.
scaffold425	subtractBed	intrn	143190	143190	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143017	143190	72	-	.	.
scaffold425	subtractBed	intrn	143282	143286	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143282	143530	96	-	.	.
scaffold425	subtractBed	intrn	143512	143647	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143448	143831	74	-	.	.
scaffold425	subtractBed	intrn	143512	143530	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143282	143530	96	-	.	.
scaffold425	subtractBed	intrn	143512	143536	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143333	143536	96	-	.	.
scaffold425	subtractBed	intrn	143646	143647	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	143646	143834	128	-	.	.
scaffold425	subtractBed	intrn	144020	144022	.	-	.	Parent=CGI_10025979;
	scaffold425	WUBlastX	DNA_Kolobok	144020	144703	173	-	.	.
scaffold425	subtractBed	intrn	265276	265317	.	-	.	Parent=CGI_10025982;
	scaffold425	TRF	Tandem_Repeat	265276	265317	84	+	.	.
scaffold425	subtractBed	intrn	265561	265690	.	-	.	Parent=CGI_10025982;
	scaffold425	TRF	Tandem_Repeat	265561	265690	117	+	.	.
scaffold425	subtractBed	intrn	265561	265690	.	-	.	Parent=CGI_10025982;
	scaffold425	TRF	Tandem_Repeat	265561	265690	154	+	.	.
scaffold425	subtractBed	intrn	515852	515948	.	-	.	Parent=CGI_10025986;
	scaffold425	TRF	Tandem_Repeat	515852	515948	133	+	.	.
scaffold425	subtractBed	intrn	514841	515119	.	-	.	Parent=CGI_10025986;
	scaffold425	WUBlastX	LINE_L1-Tx1	514841	515119	84	-	.	.
scaffold425	subtractBed	intrn	515134	515391	.	-	.	Parent=CGI_10025986;
	scaffold425	WUBlastX	LINE_L1	515134	515391	32	-	.	.
scaffold425	subtractBed	intrn	738169	738211	.	+	.	Parent=CGI_10025988;
	scaffold425	TRF	Tandem_Repeat	738169	738211	56	+	.	.
scaffold425	subtractBed	intrn	738384	739038	.	+	.	Parent=CGI_10025988;
	scaffold425	TRF	Tandem_Repeat	738384	739038	869	+	.	.
scaffold425	subtractBed	intrn	742949	743006	.	+	.	Parent=CGI_10025988;
	scaffold425	TRF	Tandem_Repeat	742949	743006	98	+	.	.
scaffold425	subtractBed	intrn	745609	746195	.	+	.	Parent=CGI_10025988;
	scaffold425	TRF	Tandem_Repeat	745609	746195	518	+	.	.
scaffold425	subtractBed	intrn	745609	746198	.	+	.	Parent=CGI_10025988;
	scaffold425	TRF	Tandem_Repeat	745609	746198	459	+	.	.
scaffold425	subtractBed	intrn	784438	784665	.	-	.	Parent=CGI_10025992;
	scaffold425	TRF	Tandem_Repeat	784438	784665	348	+	.	.
scaffold425	subtractBed	intrn	832357	832407	.	+	.	Parent=CGI_10025997;
	scaffold425	TRF	Tandem_Repeat	832357	832407	57	+	.	.
scaffold425	subtractBed	intrn	859246	859383	.	+	.	Parent=CGI_10025999;
	scaffold425	TRF	Tandem_Repeat	859246	859383	172	+	.	.
scaffold425	subtractBed	intrn	859567	859709	.	+	.	Parent=CGI_10025999;
	scaffold425	TRF	Tandem_Repeat	859567	859709	94	+	.	.
scaffold425	subtractBed	intrn	867597	867704	.	-	.	Parent=CGI_10026000;
	scaffold425	TRF	Tandem_Repeat	867597	867704	147	+	.	.
scaffold425	subtractBed	intrn	867604	867706	.	-	.	Parent=CGI_10026000;
	scaffold425	TRF	Tandem_Repeat	867604	867706	98	+	.	.
scaffold425	subtractBed	intrn	868623	868684	.	-	.	Parent=CGI_10026000;
	scaffold425	TRF	Tandem_Repeat	868623	868684	124	+	.	.
scaffold425	subtractBed	intrn	915509	915544	.	+	.	Parent=CGI_10026003;
	scaffold425	TRF	Tandem_Repeat	915509	915544	63	+	.	.
scaffold425	subtractBed	intrn	933097	933451	.	+	.	Parent=CGI_10026005;
	scaffold425	TRF	Tandem_Repeat	933097	933451	327	+	.	.
scaffold425	subtractBed	intrn	933105	933500	.	+	.	Parent=CGI_10026005;
	scaffold425	TRF	Tandem_Repeat	933105	933500	389	+	.	.
scaffold425	subtractBed	intrn	939553	939596	.	-	.	Parent=CGI_10026006;
	scaffold425	TRF	Tandem_Repeat	939553	939596	54	+	.	.
scaffold425	subtractBed	intrn	961222	961275	.	-	.	Parent=CGI_10026008;
	scaffold425	TRF	Tandem_Repeat	961222	961275	99	+	.	.
scaffold425	subtractBed	intrn	984989	985137	.	-	.	Parent=CGI_10026010;
	scaffold425	TRF	Tandem_Repeat	984989	985137	97	+	.	.
scaffold425	subtractBed	intrn	985053	985199	.	-	.	Parent=CGI_10026010;
	scaffold425	TRF	Tandem_Repeat	985053	985199	73	+	.	.
scaffold425	subtractBed	intrn	986164	986937	.	-	.	Parent=CGI_10026010;
	scaffold425	TRF	Tandem_Repeat	986164	986937	696	+	.	.
scaffold425	subtractBed	intrn	986983	987020	.	-	.	Parent=CGI_10026010;
	scaffold425	TRF	Tandem_Repeat	986983	987020	60	+	.	.
scaffold425	subtractBed	intrn	999893	999938	.	-	.	Parent=CGI_10026011;
	scaffold425	TRF	Tandem_Repeat	999893	999938	92	+	.	.
scaffold425	subtractBed	intrn	1013114	1013310	.	-	.	Parent=CGI_10026011;
	scaffold425	TRF	Tandem_Repeat	1013114	1013310	263	+	.	.
scaffold425	subtractBed	intrn	1024651	1024659	.	-	.	Parent=CGI_10026011;
	scaffold425	WUBlastX	LTR_Gypsy	1024651	1024830	49	-	.	.
scaffold425	subtractBed	intrn	1024804	1024830	.	-	.	Parent=CGI_10026011;
	scaffold425	WUBlastX	LTR_Gypsy	1024651	1024830	49	-	.	.
scaffold425	subtractBed	intrn	1041842	1041878	.	+	.	Parent=CGI_10026014;
	scaffold425	TRF	Tandem_Repeat	1041842	1041878	74	+	.	.
scaffold425	subtractBed	intrn	1045153	1045302	.	+	.	Parent=CGI_10026014;
	scaffold425	TRF	Tandem_Repeat	1045153	1045302	223	+	.	.
scaffold425	subtractBed	intrn	1041842	1041878	.	-	.	Parent=CGI_10026015;
	scaffold425	TRF	Tandem_Repeat	1041842	1041878	74	+	.	.
scaffold425	subtractBed	intrn	1045153	1045302	.	-	.	Parent=CGI_10026015;
	scaffold425	TRF	Tandem_Repeat	1045153	1045302	223	+	.	.
scaffold425	subtractBed	intrn	1071094	1071157	.	+	.	Parent=CGI_10026017;
	scaffold425	TRF	Tandem_Repeat	1071094	1071157	119	+	.	.
scaffold425	subtractBed	intrn	1114176	1114207	.	+	.	Parent=CGI_10026020;
	scaffold425	TRF	Tandem_Repeat	1114176	1114207	64	+	.	.
scaffold42508	subtractBed	intrn	16738	16797	.	-	.	Parent=CGI_10007022;
	scaffold42508	TRF	Tandem_Repeat	16738	16797	120	+	.	.
scaffold42508	subtractBed	intrn	55308	56509	.	-	.	Parent=CGI_10007026;
	scaffold42508	TRF	Tandem_Repeat	55308	56509	1839	+	.	.
scaffold42508	subtractBed	intrn	68988	69043	.	+	.	Parent=CGI_10007027;
	scaffold42508	TRF	Tandem_Repeat	68988	69043	112	+	.	.
scaffold42508	subtractBed	intrn	73201	73250	.	+	.	Parent=CGI_10007027;
	scaffold42508	TRF	Tandem_Repeat	73201	73250	100	+	.	.
scaffold42508	subtractBed	intrn	104764	104837	.	-	.	Parent=CGI_10007030;
	scaffold42508	TRF	Tandem_Repeat	104764	104837	148	+	.	.
scaffold42508	subtractBed	intrn	134329	134508	.	-	.	Parent=CGI_10007033;
	scaffold42508	WUBlastX	LTR_Copia	134329	134508	87	+	.	.
scaffold42508	subtractBed	intrn	135483	135812	.	-	.	Parent=CGI_10007033;
	scaffold42508	WUBlastX	LTR_Copia	135483	135812	169	+	.	.
scaffold42508	subtractBed	intrn	152905	152980	.	+	.	Parent=CGI_10007034;
	scaffold42508	TRF	Tandem_Repeat	152905	152980	152	+	.	.
scaffold42508	subtractBed	intrn	154197	154309	.	+	.	Parent=CGI_10007034;
	scaffold42508	TRF	Tandem_Repeat	154197	154309	111	+	.	.
scaffold42516	subtractBed	intrn	17654	17686	.	+	.	Parent=CGI_10007103;
	scaffold42516	TRF	Tandem_Repeat	17654	17686	66	+	.	.
scaffold42516	subtractBed	intrn	71914	72471	.	-	.	Parent=CGI_10007107;
	scaffold42516	WUBlastX	DNA_hAT	71914	72471	236	-	.	.
scaffold42516	subtractBed	intrn	89148	89185	.	+	.	Parent=CGI_10007109;
	scaffold42516	TRF	Tandem_Repeat	89148	89185	76	+	.	.
scaffold42516	subtractBed	intrn	100559	101478	.	+	.	Parent=CGI_10007109;
	scaffold42516	TRF	Tandem_Repeat	100559	101478	1373	+	.	.
scaffold42516	subtractBed	intrn	130024	130388	.	+	.	Parent=CGI_10007112;
	scaffold42516	TRF	Tandem_Repeat	130024	130388	447	+	.	.
scaffold42516	subtractBed	intrn	131979	132290	.	+	.	Parent=CGI_10007112;
	scaffold42516	TRF	Tandem_Repeat	131979	132290	404	+	.	.
scaffold42528	subtractBed	intrn	42174	42267	.	-	.	Parent=CGI_10007205;
	scaffold42528	TRF	Tandem_Repeat	42174	42267	57	+	.	.
scaffold42528	subtractBed	intrn	132706	133209	.	-	.	Parent=CGI_10007209;
	scaffold42528	WUBlastX	LINE_CR1-L2	132706	133209	55	-	.	.
scaffold42528	subtractBed	intrn	132697	133080	.	-	.	Parent=CGI_10007209;
	scaffold42528	WUBlastX	LINE_CR1-L2	132697	133080	112	-	.	.
scaffold42528	subtractBed	intrn	132544	133080	.	-	.	Parent=CGI_10007209;
	scaffold42528	WUBlastX	LINE_CR1-L2	132544	133080	67	-	.	.
scaffold42528	subtractBed	intrn	144171	144251	.	+	.	Parent=CGI_10007210;
	scaffold42528	WUBlastX	LTR_ERV1	144171	144251	44	+	.	.
scaffold42528	subtractBed	intrn	144407	144577	.	+	.	Parent=CGI_10007210;
	scaffold42528	WUBlastX	LTR_ERV1	144407	144577	26	+	.	.
scaffold42528	subtractBed	intrn	144177	144242	.	+	.	Parent=CGI_10007210;
	scaffold42528	WUBlastX	LTR_ERV1	144177	144242	54	+	.	.
scaffold42528	subtractBed	intrn	144410	144526	.	+	.	Parent=CGI_10007210;
	scaffold42528	WUBlastX	LTR_Copia	144410	144526	49	+	.	.
scaffold42528	subtractBed	intrn	162442	162530	.	+	.	Parent=CGI_10007212;
	scaffold42528	TRF	Tandem_Repeat	162442	162530	90	+	.	.
scaffold42528	subtractBed	intrn	166787	166915	.	+	.	Parent=CGI_10007213;
	scaffold42528	TRF	Tandem_Repeat	166787	166915	80	+	.	.
scaffold42528	subtractBed	intrn	166992	167135	.	+	.	Parent=CGI_10007213;
	scaffold42528	TRF	Tandem_Repeat	166992	167135	164	+	.	.
scaffold42528	subtractBed	intrn	166950	167135	.	+	.	Parent=CGI_10007213;
	scaffold42528	TRF	Tandem_Repeat	166950	167135	194	+	.	.
scaffold42530	subtractBed	intrn	20207	20246	.	-	.	Parent=CGI_10007158;
	scaffold42530	TRF	Tandem_Repeat	20207	20246	71	+	.	.
scaffold42530	subtractBed	intrn	48526	48564	.	+	.	Parent=CGI_10007161;
	scaffold42530	TRF	Tandem_Repeat	48526	48564	78	+	.	.
scaffold42530	subtractBed	intrn	47785	47979	.	+	.	Parent=CGI_10007161;
	scaffold42530	WUBlastX	LINE_L2	47785	47979	86	+	.	.
scaffold42530	subtractBed	intrn	46387	46458	.	+	.	Parent=CGI_10007161;
	scaffold42530	WUBlastX	LINE_L2	46387	46458	27	+	.	.
scaffold42530	subtractBed	intrn	46393	46533	.	+	.	Parent=CGI_10007161;
	scaffold42530	WUBlastX	LINE_L2	46393	46533	22	+	.	.
scaffold42530	subtractBed	intrn	46545	47180	.	+	.	Parent=CGI_10007161;
	scaffold42530	WUBlastX	LINE_L2	46545	47180	153	+	.	.
scaffold42530	subtractBed	intrn	46647	47783	.	+	.	Parent=CGI_10007161;
	scaffold42530	WUBlastX	LINE_L2	46647	47783	426	+	.	.
scaffold42530	subtractBed	intrn	156852	156985	.	-	.	Parent=CGI_10007167;
	scaffold42530	TRF	Tandem_Repeat	156852	156985	89	+	.	.
scaffold42530	subtractBed	intrn	166227	166286	.	-	.	Parent=CGI_10007168;
	scaffold42530	TRF	Tandem_Repeat	166227	166286	120	+	.	.
scaffold42556	subtractBed	intrn	44605	44649	.	+	.	Parent=CGI_10007190;
	scaffold42556	TRF	Tandem_Repeat	44605	44649	90	+	.	.
scaffold42556	subtractBed	intrn	58095	58240	.	+	.	Parent=CGI_10007191;
	scaffold42556	TRF	Tandem_Repeat	58095	58240	93	+	.	.
scaffold42556	subtractBed	intrn	58050	58229	.	+	.	Parent=CGI_10007191;
	scaffold42556	TRF	Tandem_Repeat	58050	58229	163	+	.	.
scaffold42556	subtractBed	intrn	65771	65829	.	+	.	Parent=CGI_10007191;
	scaffold42556	TRF	Tandem_Repeat	65771	65829	118	+	.	.
scaffold42556	subtractBed	intrn	65947	65995	.	+	.	Parent=CGI_10007191;
	scaffold42556	TRF	Tandem_Repeat	65947	65995	80	+	.	.
scaffold42556	subtractBed	intrn	89597	90009	.	+	.	Parent=CGI_10007192;
	scaffold42556	TRF	Tandem_Repeat	89597	90009	327	+	.	.
scaffold42556	subtractBed	intrn	89597	90009	.	+	.	Parent=CGI_10007192;
	scaffold42556	TRF	Tandem_Repeat	89597	90009	348	+	.	.
scaffold42556	subtractBed	intrn	169448	169570	.	+	.	Parent=CGI_10007198;
	scaffold42556	TRF	Tandem_Repeat	169448	169570	219	+	.	.
scaffold42558	subtractBed	intrn	33130	33207	.	+	.	Parent=CGI_10007217;
	scaffold42558	TRF	Tandem_Repeat	33130	33207	156	+	.	.
scaffold42558	subtractBed	intrn	41031	41084	.	+	.	Parent=CGI_10007217;
	scaffold42558	TRF	Tandem_Repeat	41031	41084	108	+	.	.
scaffold42558	subtractBed	intrn	42282	42321	.	+	.	Parent=CGI_10007217;
	scaffold42558	TRF	Tandem_Repeat	42282	42321	80	+	.	.
scaffold42558	subtractBed	intrn	88952	89029	.	+	.	Parent=CGI_10007220;
	scaffold42558	WUBlastX	LINE_L1	88952	89029	28	+	.	.
scaffold42558	subtractBed	intrn	105237	106777	.	+	.	Parent=CGI_10007221;
	scaffold42558	TRF	Tandem_Repeat	105237	106777	2106	+	.	.
scaffold42558	subtractBed	intrn	109219	109258	.	+	.	Parent=CGI_10007221;
	scaffold42558	TRF	Tandem_Repeat	109219	109258	62	+	.	.
scaffold42558	subtractBed	intrn	171386	171731	.	+	.	Parent=CGI_10007223;
	scaffold42558	TRF	Tandem_Repeat	171386	171731	483	+	.	.
scaffold42566	subtractBed	intrn	17338	17396	.	+	.	Parent=CGI_10007178;
	scaffold42566	TRF	Tandem_Repeat	17338	17396	109	+	.	.
scaffold42568	subtractBed	intrn	35044	35496	.	+	.	Parent=CGI_10007265;
	scaffold42568	WUBlastX	DNA_IS4EU	35044	35496	142	+	.	.
scaffold42568	subtractBed	intrn	35035	35700	.	+	.	Parent=CGI_10007265;
	scaffold42568	WUBlastX	DNA_NOF?	35035	35700	128	+	.	.
scaffold42568	subtractBed	intrn	39860	39928	.	+	.	Parent=CGI_10007265;
	scaffold42568	TRF	Tandem_Repeat	39860	39928	129	+	.	.
scaffold42568	subtractBed	intrn	72629	73457	.	-	.	Parent=CGI_10007267;
	scaffold42568	TRF	Tandem_Repeat	72629	73457	1073	+	.	.
scaffold42570	subtractBed	intrn	15287	15418	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	15287	15418	29	+	.	.
scaffold42570	subtractBed	intrn	16578	17018	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	16578	17018	39	+	.	.
scaffold42570	subtractBed	intrn	16542	16592	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1-L2	16542	16592	21	+	.	.
scaffold42570	subtractBed	intrn	16572	16847	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1-L2	16572	16847	93	+	.	.
scaffold42570	subtractBed	intrn	16554	16694	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	16554	16694	100	+	.	.
scaffold42570	subtractBed	intrn	16551	16760	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	16551	16760	94	+	.	.
scaffold42570	subtractBed	intrn	16581	16922	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_L2	16581	16922	60	+	.	.
scaffold42570	subtractBed	intrn	16325	16465	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	16325	16465	106	+	.	.
scaffold42570	subtractBed	intrn	16343	16501	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1	16343	16501	99	+	.	.
scaffold42570	subtractBed	intrn	16343	16540	.	+	.	Parent=CGI_10007233;
	scaffold42570	WUBlastX	LINE_CR1-L2	16343	16540	97	+	.	.
scaffold42570	subtractBed	intrn	41539	41583	.	-	.	Parent=CGI_10007234;
	scaffold42570	TRF	Tandem_Repeat	41539	41583	63	+	.	.
scaffold42570	subtractBed	intrn	47795	48030	.	-	.	Parent=CGI_10007234;
	scaffold42570	TRF	Tandem_Repeat	47795	48030	463	+	.	.
scaffold42570	subtractBed	intrn	169335	169365	.	-	.	Parent=CGI_10007239;
	scaffold42570	TRF	Tandem_Repeat	169335	169365	62	+	.	.
scaffold42584	subtractBed	intrn	62616	62654	.	-	.	Parent=CGI_10007306;
	scaffold42584	TRF	Tandem_Repeat	62616	62654	78	+	.	.
scaffold42584	subtractBed	intrn	76687	76722	.	+	.	Parent=CGI_10007308;
	scaffold42584	TRF	Tandem_Repeat	76687	76722	63	+	.	.
scaffold42584	subtractBed	intrn	72799	73317	.	+	.	Parent=CGI_10007308;
	scaffold42584	WUBlastX	LTR_DIRS	72799	73317	125	+	.	.
scaffold42584	subtractBed	intrn	73436	73783	.	+	.	Parent=CGI_10007308;
	scaffold42584	WUBlastX	LTR_DIRS	73436	73783	172	+	.	.
scaffold42584	subtractBed	intrn	95489	95995	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	DNA_Crypton	95489	95995	71	-	.	.
scaffold42584	subtractBed	intrn	96465	97043	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	DNA_Crypton	96465	97043	71	-	.	.
scaffold42584	subtractBed	intrn	95483	95896	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	DNA_Crypton	95483	95896	87	-	.	.
scaffold42584	subtractBed	intrn	104520	104756	.	+	.	Parent=CGI_10007309;
	scaffold42584	TRF	Tandem_Repeat	104520	104756	145	+	.	.
scaffold42584	subtractBed	intrn	104520	104631	.	+	.	Parent=CGI_10007309;
	scaffold42584	TRF	Tandem_Repeat	104520	104631	134	+	.	.
scaffold42584	subtractBed	intrn	104548	104772	.	+	.	Parent=CGI_10007309;
	scaffold42584	TRF	Tandem_Repeat	104548	104772	172	+	.	.
scaffold42584	subtractBed	intrn	104548	104772	.	+	.	Parent=CGI_10007309;
	scaffold42584	TRF	Tandem_Repeat	104548	104772	145	+	.	.
scaffold42584	subtractBed	intrn	104609	104772	.	+	.	Parent=CGI_10007309;
	scaffold42584	TRF	Tandem_Repeat	104609	104772	160	+	.	.
scaffold42584	subtractBed	intrn	100564	100887	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_L2	100564	100887	48	+	.	.
scaffold42584	subtractBed	intrn	100558	100734	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_L2	100558	100734	84	+	.	.
scaffold42584	subtractBed	intrn	100746	100991	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_CR1-L2	100746	100991	24	+	.	.
scaffold42584	subtractBed	intrn	100207	100683	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_CR1-L2	100207	100683	39	+	.	.
scaffold42584	subtractBed	intrn	100564	100701	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_CR1	100564	100701	93	+	.	.
scaffold42584	subtractBed	intrn	100330	100734	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_L2	100330	100734	47	+	.	.
scaffold42584	subtractBed	intrn	100408	100683	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_CR1	100408	100683	62	+	.	.
scaffold42584	subtractBed	intrn	100573	100803	.	+	.	Parent=CGI_10007309;
	scaffold42584	WUBlastX	LINE_L2	100573	100803	65	+	.	.
scaffold42592	subtractBed	intrn	37804	38095	.	+	.	Parent=CGI_10007255;
	scaffold42592	TRF	Tandem_Repeat	37804	38095	453	+	.	.
scaffold42592	subtractBed	intrn	43559	43588	.	+	.	Parent=CGI_10007255;
	scaffold42592	TRF	Tandem_Repeat	43559	43588	60	+	.	.
scaffold42592	subtractBed	intrn	37804	38095	.	-	.	Parent=CGI_10007256;
	scaffold42592	TRF	Tandem_Repeat	37804	38095	453	+	.	.
scaffold42592	subtractBed	intrn	48229	48275	.	-	.	Parent=CGI_10007257;
	scaffold42592	TRF	Tandem_Repeat	48229	48275	94	+	.	.
scaffold42592	subtractBed	intrn	55230	55278	.	-	.	Parent=CGI_10007259;
	scaffold42592	TRF	Tandem_Repeat	55230	55278	62	+	.	.
scaffold42592	subtractBed	intrn	57940	57989	.	-	.	Parent=CGI_10007259;
	scaffold42592	TRF	Tandem_Repeat	57940	57989	91	+	.	.
scaffold42592	subtractBed	intrn	58638	58683	.	-	.	Parent=CGI_10007259;
	scaffold42592	TRF	Tandem_Repeat	58638	58683	92	+	.	.
scaffold42592	subtractBed	intrn	68673	68724	.	-	.	Parent=CGI_10007259;
	scaffold42592	TRF	Tandem_Repeat	68673	68724	104	+	.	.
scaffold42596	subtractBed	intrn	1550	1615	.	+	.	Parent=CGI_10007272;
	scaffold42596	TRF	Tandem_Repeat	1550	1615	132	+	.	.
scaffold42596	subtractBed	intrn	2204	2244	.	+	.	Parent=CGI_10007272;
	scaffold42596	TRF	Tandem_Repeat	2204	2244	82	+	.	.
scaffold42596	subtractBed	intrn	9279	9331	.	+	.	Parent=CGI_10007272;
	scaffold42596	TRF	Tandem_Repeat	9279	9331	88	+	.	.
scaffold42596	subtractBed	intrn	9279	9334	.	+	.	Parent=CGI_10007272;
	scaffold42596	TRF	Tandem_Repeat	9279	9334	58	+	.	.
scaffold42596	subtractBed	intrn	9279	9334	.	+	.	Parent=CGI_10007272;
	scaffold42596	TRF	Tandem_Repeat	9279	9334	76	+	.	.
scaffold42596	subtractBed	intrn	33933	34164	.	-	.	Parent=CGI_10007274;
	scaffold42596	TRF	Tandem_Repeat	33933	34164	176	+	.	.
scaffold42596	subtractBed	intrn	55543	55596	.	-	.	Parent=CGI_10007274;
	scaffold42596	TRF	Tandem_Repeat	55543	55596	74	+	.	.
scaffold42596	subtractBed	intrn	132237	132500	.	-	.	Parent=CGI_10007276;
	scaffold42596	TRF	Tandem_Repeat	132237	132500	422	+	.	.
scaffold42596	subtractBed	intrn	134747	134926	.	-	.	Parent=CGI_10007276;
	scaffold42596	TRF	Tandem_Repeat	134747	134926	306	+	.	.
scaffold42596	subtractBed	intrn	136180	136267	.	-	.	Parent=CGI_10007276;
	scaffold42596	TRF	Tandem_Repeat	136180	136267	66	+	.	.
scaffold42596	subtractBed	intrn	136174	136312	.	-	.	Parent=CGI_10007276;
	scaffold42596	TRF	Tandem_Repeat	136174	136312	260	+	.	.
scaffold42596	subtractBed	intrn	137218	137243	.	-	.	Parent=CGI_10007276;
	scaffold42596	TRF	Tandem_Repeat	137218	137243	52	+	.	.
scaffold42598	subtractBed	intrn	14855	14895	.	-	.	Parent=CGI_10007331;
	scaffold42598	TRF	Tandem_Repeat	14855	14895	61	+	.	.
scaffold42598	subtractBed	intrn	16936	16989	.	-	.	Parent=CGI_10007331;
	scaffold42598	TRF	Tandem_Repeat	16936	16989	74	+	.	.
scaffold42598	subtractBed	intrn	52516	53160	.	+	.	Parent=CGI_10007333;
	scaffold42598	WUBlastX	LINE_RTE-X	52516	53160	346	-	.	.
scaffold42598	subtractBed	intrn	53232	54407	.	+	.	Parent=CGI_10007333;
	scaffold42598	WUBlastX	LINE_RTE-X	53232	54407	626	-	.	.
scaffold42598	subtractBed	intrn	52378	53160	.	+	.	Parent=CGI_10007333;
	scaffold42598	WUBlastX	LINE_RTE-X	52378	53160	200	-	.	.
scaffold42598	subtractBed	intrn	97325	97358	.	+	.	Parent=CGI_10007334;
	scaffold42598	TRF	Tandem_Repeat	97325	97358	50	+	.	.
scaffold42598	subtractBed	intrn	98715	98791	.	+	.	Parent=CGI_10007334;
	scaffold42598	TRF	Tandem_Repeat	98715	98791	118	+	.	.
scaffold42598	subtractBed	intrn	109523	109566	.	-	.	Parent=CGI_10007335;
	scaffold42598	TRF	Tandem_Repeat	109523	109566	56	+	.	.
scaffold42598	subtractBed	intrn	148274	148984	.	+	.	Parent=CGI_10007337;
	scaffold42598	TRF	Tandem_Repeat	148274	148984	563	+	.	.
scaffold42598	subtractBed	intrn	148277	148954	.	+	.	Parent=CGI_10007337;
	scaffold42598	TRF	Tandem_Repeat	148277	148954	209	+	.	.
scaffold42598	subtractBed	intrn	151528	151582	.	+	.	Parent=CGI_10007337;
	scaffold42598	TRF	Tandem_Repeat	151528	151582	92	+	.	.
scaffold42598	subtractBed	intrn	151593	152283	.	+	.	Parent=CGI_10007337;
	scaffold42598	TRF	Tandem_Repeat	151593	152283	1000	+	.	.
scaffold426	subtractBed	intrn	87559	87592	.	-	.	Parent=CGI_10006150;
	scaffold426	TRF	Tandem_Repeat	87559	87592	59	+	.	.
scaffold42604	subtractBed	intrn	31096	31149	.	+	.	Parent=CGI_10007312;
	scaffold42604	TRF	Tandem_Repeat	31096	31149	74	+	.	.
scaffold42604	subtractBed	intrn	31104	31149	.	+	.	Parent=CGI_10007312;
	scaffold42604	TRF	Tandem_Repeat	31104	31149	56	+	.	.
scaffold42604	subtractBed	intrn	28767	29245	.	+	.	Parent=CGI_10007312;
	scaffold42604	WUBlastX	LTR_DIRS	28589	29245	22	+	.	.
scaffold42604	subtractBed	intrn	29126	29245	.	+	.	Parent=CGI_10007312;
	scaffold42604	WUBlastX	LTR_DIRS	29126	29245	54	+	.	.
scaffold42604	subtractBed	intrn	45836	45866	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	45836	45866	55	+	.	.
scaffold42604	subtractBed	intrn	45978	46032	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	45978	46032	96	+	.	.
scaffold42604	subtractBed	intrn	55304	55329	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	55304	55329	52	+	.	.
scaffold42604	subtractBed	intrn	59526	59686	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	59526	59686	115	+	.	.
scaffold42604	subtractBed	intrn	59526	59686	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	59526	59686	151	+	.	.
scaffold42604	subtractBed	intrn	65256	65899	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	65256	65903	847	+	.	.
scaffold42604	subtractBed	intrn	65256	65899	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	65256	65903	996	+	.	.
scaffold42604	subtractBed	intrn	65256	65899	.	-	.	Parent=CGI_10007313;
	scaffold42604	TRF	Tandem_Repeat	65256	65906	885	+	.	.
scaffold42604	subtractBed	intrn	85104	85153	.	-	.	Parent=CGI_10007314;
	scaffold42604	TRF	Tandem_Repeat	85104	85153	100	+	.	.
scaffold42604	subtractBed	intrn	88956	89130	.	-	.	Parent=CGI_10007314;
	scaffold42604	TRF	Tandem_Repeat	88956	89130	305	+	.	.
scaffold42604	subtractBed	intrn	91706	91751	.	-	.	Parent=CGI_10007314;
	scaffold42604	TRF	Tandem_Repeat	91706	91751	92	+	.	.
scaffold42604	subtractBed	intrn	93045	93092	.	-	.	Parent=CGI_10007314;
	scaffold42604	TRF	Tandem_Repeat	93045	93092	96	+	.	.
scaffold42618	subtractBed	intrn	64395	64442	.	+	.	Parent=CGI_10007340;
	scaffold42618	TRF	Tandem_Repeat	64395	64442	96	+	.	.
scaffold42618	subtractBed	intrn	72521	72570	.	+	.	Parent=CGI_10007340;
	scaffold42618	TRF	Tandem_Repeat	72521	72570	91	+	.	.
scaffold42618	subtractBed	intrn	156679	156731	.	-	.	Parent=CGI_10007341;
	scaffold42618	TRF	Tandem_Repeat	156679	156731	106	+	.	.
scaffold42634	subtractBed	intrn	21562	21620	.	-	.	Parent=CGI_10007345;
	scaffold42634	TRF	Tandem_Repeat	21562	21620	118	+	.	.
scaffold42634	subtractBed	intrn	34378	34746	.	+	.	Parent=CGI_10007347;
	scaffold42634	TRF	Tandem_Repeat	34378	34746	459	+	.	.
scaffold42634	subtractBed	intrn	49855	49889	.	+	.	Parent=CGI_10007347;
	scaffold42634	TRF	Tandem_Repeat	49855	49889	52	+	.	.
scaffold42634	subtractBed	intrn	61437	61498	.	+	.	Parent=CGI_10007347;
	scaffold42634	TRF	Tandem_Repeat	61437	61498	81	+	.	.
scaffold42640	subtractBed	intrn	20282	20321	.	+	.	Parent=CGI_10007371;
	scaffold42640	TRF	Tandem_Repeat	20282	20321	71	+	.	.
scaffold42640	subtractBed	intrn	40677	40743	.	-	.	Parent=CGI_10007374;
	scaffold42640	TRF	Tandem_Repeat	40677	40743	89	+	.	.
scaffold42640	subtractBed	intrn	78058	78129	.	+	.	Parent=CGI_10007377;
	scaffold42640	TRF	Tandem_Repeat	78058	78129	121	+	.	.
scaffold42640	subtractBed	intrn	149985	150029	.	-	.	Parent=CGI_10007380;
	scaffold42640	TRF	Tandem_Repeat	149985	150029	90	+	.	.
scaffold42640	subtractBed	intrn	150163	150207	.	-	.	Parent=CGI_10007380;
	scaffold42640	TRF	Tandem_Repeat	150163	150207	90	+	.	.
scaffold42640	subtractBed	intrn	159300	159384	.	+	.	Parent=CGI_10007381;
	scaffold42640	TRF	Tandem_Repeat	159300	159384	83	+	.	.
scaffold42640	subtractBed	intrn	161562	161625	.	+	.	Parent=CGI_10007381;
	scaffold42640	TRF	Tandem_Repeat	161562	161625	128	+	.	.
scaffold42640	subtractBed	intrn	170429	170464	.	+	.	Parent=CGI_10007382;
	scaffold42640	TRF	Tandem_Repeat	170429	170464	72	+	.	.
scaffold42640	subtractBed	intrn	172008	172054	.	+	.	Parent=CGI_10007382;
	scaffold42640	TRF	Tandem_Repeat	172008	172054	94	+	.	.
scaffold42640	subtractBed	intrn	172124	172181	.	+	.	Parent=CGI_10007382;
	scaffold42640	TRF	Tandem_Repeat	172124	172181	107	+	.	.
scaffold42640	subtractBed	intrn	173084	173137	.	+	.	Parent=CGI_10007382;
	scaffold42640	TRF	Tandem_Repeat	173084	173137	65	+	.	.
scaffold42648	subtractBed	intrn	9573	9620	.	+	.	Parent=CGI_10007383;
	scaffold42648	TRF	Tandem_Repeat	9573	9620	51	+	.	.
scaffold42648	subtractBed	intrn	9573	9617	.	+	.	Parent=CGI_10007383;
	scaffold42648	TRF	Tandem_Repeat	9573	9617	72	+	.	.
scaffold42648	subtractBed	intrn	33561	33721	.	+	.	Parent=CGI_10007385;
	scaffold42648	TRF	Tandem_Repeat	33561	33721	77	+	.	.
scaffold42648	subtractBed	intrn	33625	33740	.	+	.	Parent=CGI_10007385;
	scaffold42648	TRF	Tandem_Repeat	33625	33740	187	+	.	.
scaffold42648	subtractBed	intrn	87260	87299	.	-	.	Parent=CGI_10007388;
	scaffold42648	TRF	Tandem_Repeat	87260	87299	80	+	.	.
scaffold42648	subtractBed	intrn	90898	90961	.	-	.	Parent=CGI_10007388;
	scaffold42648	TRF	Tandem_Repeat	90898	90961	87	+	.	.
scaffold42648	subtractBed	intrn	91599	91721	.	-	.	Parent=CGI_10007388;
	scaffold42648	TRF	Tandem_Repeat	91599	91721	131	+	.	.
scaffold42648	subtractBed	intrn	91813	91880	.	-	.	Parent=CGI_10007388;
	scaffold42648	TRF	Tandem_Repeat	91813	91880	82	+	.	.
scaffold42648	subtractBed	intrn	93394	93456	.	-	.	Parent=CGI_10007388;
	scaffold42648	TRF	Tandem_Repeat	93394	93456	62	+	.	.
scaffold42648	subtractBed	intrn	168524	169135	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Gypsy	168524	169135	80	-	.	.
scaffold42648	subtractBed	intrn	172099	172266	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	172099	172266	141	-	.	.
scaffold42648	subtractBed	intrn	173318	174499	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	173318	174499	37	-	.	.
scaffold42648	subtractBed	intrn	172245	172892	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	172245	172892	263	-	.	.
scaffold42648	subtractBed	intrn	172245	172646	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	172245	172646	281	-	.	.
scaffold42648	subtractBed	intrn	170554	171708	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	170554	171708	785	-	.	.
scaffold42648	subtractBed	intrn	172892	174289	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	172892	174289	686	-	.	.
scaffold42648	subtractBed	intrn	170554	172209	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	170554	172209	443	-	.	.
scaffold42648	subtractBed	intrn	169155	169784	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Gypsy	169155	169784	244	-	.	.
scaffold42648	subtractBed	intrn	168725	169135	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Gypsy-Cigr	168725	169135	236	-	.	.
scaffold42648	subtractBed	intrn	168626	169135	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Gypsy	168626	169135	98	-	.	.
scaffold42648	subtractBed	intrn	170521	170718	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	170521	170718	94	-	.	.
scaffold42648	subtractBed	intrn	169155	169568	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Gypsy	169155	169568	409	-	.	.
scaffold42648	subtractBed	intrn	170105	170170	.	-	.	Parent=CGI_10007395;
	scaffold42648	WUBlastX	LTR_Pao	170105	170170	21	-	.	.
scaffold42656	subtractBed	intrn	65017	65064	.	-	.	Parent=CGI_10007413;
	scaffold42656	TRF	Tandem_Repeat	65017	65064	96	+	.	.
scaffold42656	subtractBed	intrn	64408	64662	.	-	.	Parent=CGI_10007413;
	scaffold42656	WUBlastX	LINE_L1-Tx1	64408	64662	82	-	.	.
scaffold42656	subtractBed	intrn	62604	62951	.	-	.	Parent=CGI_10007413;
	scaffold42656	WUBlastX	LINE_L1-Tx1	62604	62951	38	-	.	.
scaffold42656	subtractBed	intrn	63248	63796	.	-	.	Parent=CGI_10007413;
	scaffold42656	WUBlastX	LINE_L1-Tx1	63248	63796	119	-	.	.
scaffold42656	subtractBed	intrn	63780	63860	.	-	.	Parent=CGI_10007413;
	scaffold42656	WUBlastX	LINE_L1-Tx1	63780	63860	25	-	.	.
scaffold42656	subtractBed	intrn	62733	62993	.	-	.	Parent=CGI_10007413;
	scaffold42656	WUBlastX	LINE_L1-Tx1	62733	62993	40	-	.	.
scaffold42656	subtractBed	intrn	100474	101340	.	-	.	Parent=CGI_10007415;
	scaffold42656	WUBlastX	LINE_L1-Tx1	100474	101340	70	+	.	.
scaffold42656	subtractBed	intrn	99827	100378	.	-	.	Parent=CGI_10007415;
	scaffold42656	WUBlastX	LINE_L1-Tx1	99827	100378	246	+	.	.
scaffold42656	subtractBed	intrn	99827	100510	.	-	.	Parent=CGI_10007415;
	scaffold42656	WUBlastX	LINE_L1	99827	100510	223	+	.	.
scaffold42656	subtractBed	intrn	113806	113855	.	-	.	Parent=CGI_10007417;
	scaffold42656	TRF	Tandem_Repeat	113806	113855	100	+	.	.
scaffold42656	subtractBed	intrn	167056	167313	.	-	.	Parent=CGI_10007419;
	scaffold42656	WUBlastX	DNA_Harbinger	167056	167313	56	+	.	.
scaffold42656	subtractBed	intrn	168729	168771	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	168729	168771	77	+	.	.
scaffold42656	subtractBed	intrn	170111	171339	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	170111	171339	1639	+	.	.
scaffold42656	subtractBed	intrn	172547	172588	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	172547	172588	59	+	.	.
scaffold42656	subtractBed	intrn	174935	176428	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	174935	176428	1436	+	.	.
scaffold42656	subtractBed	intrn	174928	176428	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	174928	176428	1536	+	.	.
scaffold42656	subtractBed	intrn	174935	176428	.	-	.	Parent=CGI_10007419;
	scaffold42656	TRF	Tandem_Repeat	174935	176428	1610	+	.	.
scaffold42662	subtractBed	intrn	2179	2236	.	-	.	Parent=CGI_10007449;
	scaffold42662	TRF	Tandem_Repeat	2179	2236	116	+	.	.
scaffold42662	subtractBed	intrn	29847	29871	.	+	.	Parent=CGI_10007454;
	scaffold42662	TRF	Tandem_Repeat	29847	29871	50	+	.	.
scaffold42662	subtractBed	intrn	36754	36904	.	+	.	Parent=CGI_10007454;
	scaffold42662	TRF	Tandem_Repeat	36754	36904	225	+	.	.
scaffold42662	subtractBed	intrn	36929	37107	.	+	.	Parent=CGI_10007454;
	scaffold42662	TRF	Tandem_Repeat	36929	37107	261	+	.	.
scaffold42662	subtractBed	intrn	49057	49102	.	-	.	Parent=CGI_10007455;
	scaffold42662	TRF	Tandem_Repeat	49057	49102	65	+	.	.
scaffold42662	subtractBed	intrn	128186	128320	.	-	.	Parent=CGI_10007460;
	scaffold42662	TRF	Tandem_Repeat	128186	128320	157	+	.	.
scaffold42662	subtractBed	intrn	167340	167393	.	+	.	Parent=CGI_10007463;
	scaffold42662	TRF	Tandem_Repeat	167340	167393	108	+	.	.
scaffold42662	subtractBed	intrn	169512	169555	.	+	.	Parent=CGI_10007463;
	scaffold42662	TRF	Tandem_Repeat	169512	169555	72	+	.	.
scaffold42662	subtractBed	intrn	169895	169938	.	+	.	Parent=CGI_10007463;
	scaffold42662	TRF	Tandem_Repeat	169895	169938	88	+	.	.
scaffold42662	subtractBed	intrn	170003	170049	.	+	.	Parent=CGI_10007463;
	scaffold42662	TRF	Tandem_Repeat	170003	170049	85	+	.	.
scaffold42674	subtractBed	intrn	41461	41485	.	+	.	Parent=CGI_10007438;
	scaffold42674	TRF	Tandem_Repeat	41461	41485	50	+	.	.
scaffold42674	subtractBed	intrn	55225	56189	.	+	.	Parent=CGI_10007440;
	scaffold42674	TRF	Tandem_Repeat	55225	56189	1587	+	.	.
scaffold42674	subtractBed	intrn	58013	58136	.	+	.	Parent=CGI_10007440;
	scaffold42674	TRF	Tandem_Repeat	58013	58136	166	+	.	.
scaffold42674	subtractBed	intrn	76604	76647	.	+	.	Parent=CGI_10007441;
	scaffold42674	TRF	Tandem_Repeat	76604	76647	88	+	.	.
scaffold42674	subtractBed	intrn	89208	89600	.	+	.	Parent=CGI_10007441;
	scaffold42674	WUBlastX	LINE_L1-Tx1	89208	89600	73	+	.	.
scaffold42674	subtractBed	intrn	88754	89440	.	+	.	Parent=CGI_10007441;
	scaffold42674	WUBlastX	LINE_L1-Tx1	88754	89440	319	+	.	.
scaffold42674	subtractBed	intrn	88622	89416	.	+	.	Parent=CGI_10007441;
	scaffold42674	WUBlastX	LINE_L1-Tx1	88622	89416	168	+	.	.
scaffold42674	subtractBed	intrn	89427	89645	.	+	.	Parent=CGI_10007441;
	scaffold42674	WUBlastX	LINE_L1	89427	89645	45	+	.	.
scaffold42674	subtractBed	intrn	107300	107457	.	-	.	Parent=CGI_10007442;
	scaffold42674	TRF	Tandem_Repeat	107300	107457	246	+	.	.
scaffold42674	subtractBed	intrn	129070	129119	.	-	.	Parent=CGI_10007444;
	scaffold42674	TRF	Tandem_Repeat	129070	129119	100	+	.	.
scaffold42674	subtractBed	intrn	131923	131978	.	-	.	Parent=CGI_10007444;
	scaffold42674	TRF	Tandem_Repeat	131923	131978	112	+	.	.
scaffold42674	subtractBed	intrn	142406	142450	.	-	.	Parent=CGI_10007447;
	scaffold42674	TRF	Tandem_Repeat	142406	142450	90	+	.	.
scaffold42674	subtractBed	intrn	178767	178979	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	178767	178979	20	+	.	.
scaffold42674	subtractBed	intrn	175725	176180	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	175725	176180	287	-	.	.
scaffold42674	subtractBed	intrn	173170	173325	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	173170	173325	41	-	.	.
scaffold42674	subtractBed	intrn	177974	178741	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	177974	178741	206	+	.	.
scaffold42674	subtractBed	intrn	172423	173298	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	172423	173298	112	-	.	.
scaffold42674	subtractBed	intrn	172558	173247	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-X	172558	173247	266	-	.	.
scaffold42674	subtractBed	intrn	175716	176267	.	+	.	Parent=CGI_10007448;
	scaffold42674	WUBlastX	LINE_RTE-BovB	175716	176267	49	-	.	.
scaffold42684	subtractBed	intrn	13986	14010	.	+	.	Parent=CGI_10007476;
	scaffold42684	TRF	Tandem_Repeat	13986	14010	50	+	.	.
scaffold42684	subtractBed	intrn	16716	16741	.	+	.	Parent=CGI_10007476;
	scaffold42684	TRF	Tandem_Repeat	16716	16741	52	+	.	.
scaffold42684	subtractBed	intrn	23450	23492	.	-	.	Parent=CGI_10007477;
	scaffold42684	TRF	Tandem_Repeat	23450	23492	86	+	.	.
scaffold42684	subtractBed	intrn	23668	23703	.	-	.	Parent=CGI_10007477;
	scaffold42684	TRF	Tandem_Repeat	23668	23703	72	+	.	.
scaffold42684	subtractBed	intrn	82635	82719	.	+	.	Parent=CGI_10007481;
	scaffold42684	TRF	Tandem_Repeat	82635	82719	84	+	.	.
scaffold42684	subtractBed	intrn	82629	82717	.	+	.	Parent=CGI_10007481;
	scaffold42684	TRF	Tandem_Repeat	82629	82717	81	+	.	.
scaffold42684	subtractBed	intrn	112664	113369	.	+	.	Parent=CGI_10007483;
	scaffold42684	TRF	Tandem_Repeat	112664	113369	1130	+	.	.
scaffold42684	subtractBed	intrn	152111	152468	.	+	.	Parent=CGI_10007485;
	scaffold42684	TRF	Tandem_Repeat	152111	152468	217	+	.	.
scaffold42684	subtractBed	intrn	177979	178188	.	+	.	Parent=CGI_10007488;
	scaffold42684	TRF	Tandem_Repeat	177979	178188	330	+	.	.
scaffold42684	subtractBed	intrn	179422	179588	.	+	.	Parent=CGI_10007488;
	scaffold42684	TRF	Tandem_Repeat	179422	179588	128	+	.	.
scaffold42684	subtractBed	intrn	179398	179597	.	+	.	Parent=CGI_10007488;
	scaffold42684	TRF	Tandem_Repeat	179398	179597	283	+	.	.
scaffold42684	subtractBed	intrn	181026	181278	.	+	.	Parent=CGI_10007488;
	scaffold42684	TRF	Tandem_Repeat	181026	181278	164	+	.	.
scaffold42684	subtractBed	intrn	181026	181279	.	+	.	Parent=CGI_10007488;
	scaffold42684	TRF	Tandem_Repeat	181026	181279	235	+	.	.
scaffold427	subtractBed	intrn	22108	22152	.	+	.	Parent=CGI_10006658;
	scaffold427	TRF	Tandem_Repeat	22108	22152	90	+	.	.
scaffold427	subtractBed	intrn	60926	61007	.	-	.	Parent=CGI_10006659;
	scaffold427	TRF	Tandem_Repeat	60926	61007	55	+	.	.
scaffold427	subtractBed	intrn	60967	60999	.	-	.	Parent=CGI_10006659;
	scaffold427	TRF	Tandem_Repeat	60967	60999	52	+	.	.
scaffold427	subtractBed	intrn	62884	63742	.	-	.	Parent=CGI_10006659;
	scaffold427	TRF	Tandem_Repeat	62884	63742	1202	+	.	.
scaffold427	subtractBed	intrn	62884	63742	.	-	.	Parent=CGI_10006659;
	scaffold427	TRF	Tandem_Repeat	62884	63742	1211	+	.	.
scaffold427	subtractBed	intrn	76749	79736	.	-	.	Parent=CGI_10006661;
	scaffold427	WUBlastX	LTR_Gypsy	76749	79736	2135	+	.	.
scaffold427	subtractBed	intrn	78177	80045	.	-	.	Parent=CGI_10006661;
	scaffold427	WUBlastX	LTR_Gypsy	78177	80045	1070	+	.	.
scaffold42704	subtractBed	intrn	17806	17838	.	+	.	Parent=CGI_10007536;
	scaffold42704	TRF	Tandem_Repeat	17806	17838	59	+	.	.
scaffold42704	subtractBed	intrn	18816	18875	.	+	.	Parent=CGI_10007536;
	scaffold42704	TRF	Tandem_Repeat	18816	18875	113	+	.	.
scaffold42704	subtractBed	intrn	39757	40085	.	-	.	Parent=CGI_10007538;
	scaffold42704	TRF	Tandem_Repeat	39757	40085	383	+	.	.
scaffold42726	subtractBed	intrn	4948	5036	.	-	.	Parent=CGI_10007566;
	scaffold42726	TRF	Tandem_Repeat	4948	5036	65	+	.	.
scaffold42726	subtractBed	intrn	5861	5933	.	-	.	Parent=CGI_10007566;
	scaffold42726	TRF	Tandem_Repeat	5861	5933	146	+	.	.
scaffold42726	subtractBed	intrn	6222	6516	.	-	.	Parent=CGI_10007566;
	scaffold42726	TRF	Tandem_Repeat	6222	6516	373	+	.	.
scaffold42726	subtractBed	intrn	8298	8925	.	-	.	Parent=CGI_10007566;
	scaffold42726	TRF	Tandem_Repeat	8298	8925	897	+	.	.
scaffold42726	subtractBed	intrn	13436	13493	.	-	.	Parent=CGI_10007566;
	scaffold42726	TRF	Tandem_Repeat	13436	13493	116	+	.	.
scaffold42726	subtractBed	intrn	21844	21883	.	-	.	Parent=CGI_10007567;
	scaffold42726	TRF	Tandem_Repeat	21844	21883	80	+	.	.
scaffold42726	subtractBed	intrn	25659	25693	.	-	.	Parent=CGI_10007567;
	scaffold42726	TRF	Tandem_Repeat	25659	25693	52	+	.	.
scaffold42726	subtractBed	intrn	150377	150548	.	-	.	Parent=CGI_10007570;
	scaffold42726	TRF	Tandem_Repeat	150377	150548	101	+	.	.
scaffold42726	subtractBed	intrn	150413	150643	.	-	.	Parent=CGI_10007570;
	scaffold42726	TRF	Tandem_Repeat	150413	150643	232	+	.	.
scaffold42726	subtractBed	intrn	150396	150689	.	-	.	Parent=CGI_10007570;
	scaffold42726	TRF	Tandem_Repeat	150396	150689	256	+	.	.
scaffold42726	subtractBed	intrn	150429	150687	.	-	.	Parent=CGI_10007570;
	scaffold42726	TRF	Tandem_Repeat	150429	150687	225	+	.	.
scaffold42726	subtractBed	intrn	183529	183778	.	-	.	Parent=CGI_10007572;
	scaffold42726	TRF	Tandem_Repeat	183529	183778	65	+	.	.
scaffold42740	subtractBed	intrn	37196	37238	.	+	.	Parent=CGI_10007607;
	scaffold42740	TRF	Tandem_Repeat	37196	37238	68	+	.	.
scaffold42740	subtractBed	intrn	41845	41904	.	+	.	Parent=CGI_10007607;
	scaffold42740	TRF	Tandem_Repeat	41845	41904	70	+	.	.
scaffold42740	subtractBed	intrn	48759	48794	.	+	.	Parent=CGI_10007607;
	scaffold42740	TRF	Tandem_Repeat	48759	48794	72	+	.	.
scaffold42740	subtractBed	intrn	65875	65943	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	65875	65943	138	+	.	.
scaffold42740	subtractBed	intrn	67093	67119	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	67093	67119	54	+	.	.
scaffold42740	subtractBed	intrn	75309	75815	.	+	.	Parent=CGI_10007608;
	scaffold42740	WUBlastX	DNA_Harbinger	75309	76163	323	-	.	.
scaffold42740	subtractBed	intrn	76946	76992	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	76946	76992	94	+	.	.
scaffold42740	subtractBed	intrn	77231	77321	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	77231	77321	146	+	.	.
scaffold42740	subtractBed	intrn	77287	77377	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	77287	77377	98	+	.	.
scaffold42740	subtractBed	intrn	78865	78973	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	78865	78973	146	+	.	.
scaffold42740	subtractBed	intrn	76152	76294	.	+	.	Parent=CGI_10007608;
	scaffold42740	WUBlastX	DNA_Harbinger	76121	76294	22	-	.	.
scaffold42740	subtractBed	intrn	77045	77107	.	+	.	Parent=CGI_10007608;
	scaffold42740	WUBlastX	DNA_Harbinger	77045	77107	24	-	.	.
scaffold42740	subtractBed	intrn	76152	76163	.	+	.	Parent=CGI_10007608;
	scaffold42740	WUBlastX	DNA_Harbinger	75309	76163	323	-	.	.
scaffold42740	subtractBed	intrn	81923	81961	.	+	.	Parent=CGI_10007608;
	scaffold42740	TRF	Tandem_Repeat	81923	81961	78	+	.	.
scaffold42740	subtractBed	intrn	76946	76992	.	-	.	Parent=CGI_10007609;
	scaffold42740	TRF	Tandem_Repeat	76946	76992	94	+	.	.
scaffold42740	subtractBed	intrn	77231	77321	.	-	.	Parent=CGI_10007609;
	scaffold42740	TRF	Tandem_Repeat	77231	77321	146	+	.	.
scaffold42740	subtractBed	intrn	77287	77377	.	-	.	Parent=CGI_10007609;
	scaffold42740	TRF	Tandem_Repeat	77287	77377	98	+	.	.
scaffold42740	subtractBed	intrn	78865	78973	.	-	.	Parent=CGI_10007609;
	scaffold42740	TRF	Tandem_Repeat	78865	78973	146	+	.	.
scaffold42740	subtractBed	intrn	76152	76294	.	-	.	Parent=CGI_10007609;
	scaffold42740	WUBlastX	DNA_Harbinger	76121	76294	22	-	.	.
scaffold42740	subtractBed	intrn	77045	77107	.	-	.	Parent=CGI_10007609;
	scaffold42740	WUBlastX	DNA_Harbinger	77045	77107	24	-	.	.
scaffold42740	subtractBed	intrn	76152	76163	.	-	.	Parent=CGI_10007609;
	scaffold42740	WUBlastX	DNA_Harbinger	75309	76163	323	-	.	.
scaffold42740	subtractBed	intrn	81923	81961	.	-	.	Parent=CGI_10007609;
	scaffold42740	TRF	Tandem_Repeat	81923	81961	78	+	.	.
scaffold42754	subtractBed	intrn	2070	2105	.	+	.	Parent=CGI_10007669;
	scaffold42754	TRF	Tandem_Repeat	2070	2105	54	+	.	.
scaffold42754	subtractBed	intrn	25847	26064	.	-	.	Parent=CGI_10007671;
	scaffold42754	TRF	Tandem_Repeat	25847	26064	391	+	.	.
scaffold42754	subtractBed	intrn	38223	38363	.	-	.	Parent=CGI_10007672;
	scaffold42754	TRF	Tandem_Repeat	38223	38363	255	+	.	.
scaffold42754	subtractBed	intrn	41000	41051	.	-	.	Parent=CGI_10007672;
	scaffold42754	TRF	Tandem_Repeat	41000	41051	104	+	.	.
scaffold42754	subtractBed	intrn	43840	44140	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	43840	44140	541	+	.	.
scaffold42754	subtractBed	intrn	45962	46087	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	45962	46087	80	+	.	.
scaffold42754	subtractBed	intrn	46314	46368	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	46314	46368	110	+	.	.
scaffold42754	subtractBed	intrn	46768	46849	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	46768	46849	92	+	.	.
scaffold42754	subtractBed	intrn	47007	47123	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	47007	47123	112	+	.	.
scaffold42754	subtractBed	intrn	47029	47123	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	47029	47123	127	+	.	.
scaffold42754	subtractBed	intrn	48699	49077	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	48699	49077	435	+	.	.
scaffold42754	subtractBed	intrn	48699	49077	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	48699	49077	468	+	.	.
scaffold42754	subtractBed	intrn	52413	52466	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	52413	52466	73	+	.	.
scaffold42754	subtractBed	intrn	52406	52460	.	-	.	Parent=CGI_10007673;
	scaffold42754	TRF	Tandem_Repeat	52406	52460	65	+	.	.
scaffold42754	subtractBed	intrn	73523	73907	.	-	.	Parent=CGI_10007674;
	scaffold42754	TRF	Tandem_Repeat	73523	73907	598	+	.	.
scaffold42754	subtractBed	intrn	135198	135382	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	135198	135382	155	+	.	.
scaffold42754	subtractBed	intrn	135166	135380	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	135166	135380	141	+	.	.
scaffold42754	subtractBed	intrn	137328	137877	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	137328	137891	536	+	.	.
scaffold42754	subtractBed	intrn	137329	137877	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	137329	137891	748	+	.	.
scaffold42754	subtractBed	intrn	144880	144997	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	144880	144997	218	+	.	.
scaffold42754	subtractBed	intrn	148693	148744	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	148693	148744	104	+	.	.
scaffold42754	subtractBed	intrn	152143	152193	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	152143	152193	75	+	.	.
scaffold42754	subtractBed	intrn	154149	154770	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	154149	154770	617	+	.	.
scaffold42754	subtractBed	intrn	160143	160421	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	160143	160421	513	+	.	.
scaffold42754	subtractBed	intrn	160478	160665	.	-	.	Parent=CGI_10007679;
	scaffold42754	TRF	Tandem_Repeat	160478	160665	286	+	.	.
scaffold42754	subtractBed	intrn	161869	161894	.	+	.	Parent=CGI_10007680;
	scaffold42754	TRF	Tandem_Repeat	161869	161894	52	+	.	.
scaffold42760	subtractBed	intrn	7169	7231	.	+	.	Parent=CGI_10007625;
	scaffold42760	TRF	Tandem_Repeat	7169	7231	119	+	.	.
scaffold42760	subtractBed	intrn	59167	59224	.	-	.	Parent=CGI_10007628;
	scaffold42760	TRF	Tandem_Repeat	59167	59224	73	+	.	.
scaffold42760	subtractBed	intrn	59167	59224	.	-	.	Parent=CGI_10007628;
	scaffold42760	TRF	Tandem_Repeat	59167	59224	73	+	.	.
scaffold42760	subtractBed	intrn	59170	59223	.	-	.	Parent=CGI_10007628;
	scaffold42760	TRF	Tandem_Repeat	59170	59223	56	+	.	.
scaffold42760	subtractBed	intrn	88228	88256	.	-	.	Parent=CGI_10007629;
	scaffold42760	TRF	Tandem_Repeat	88228	88256	58	+	.	.
scaffold42760	subtractBed	intrn	107995	108042	.	-	.	Parent=CGI_10007631;
	scaffold42760	TRF	Tandem_Repeat	107995	108042	96	+	.	.
scaffold42760	subtractBed	intrn	126423	126453	.	+	.	Parent=CGI_10007632;
	scaffold42760	TRF	Tandem_Repeat	126423	126453	62	+	.	.
scaffold42766	subtractBed	intrn	887	1034	.	-	.	Parent=CGI_10007660;
	scaffold42766	TRF	Tandem_Repeat	887	1034	87	+	.	.
scaffold42766	subtractBed	intrn	2226	2934	.	-	.	Parent=CGI_10007660;
	scaffold42766	TRF	Tandem_Repeat	2226	2934	971	+	.	.
scaffold42766	subtractBed	intrn	2945	2995	.	-	.	Parent=CGI_10007660;
	scaffold42766	TRF	Tandem_Repeat	2945	2995	75	+	.	.
scaffold42766	subtractBed	intrn	2938	2987	.	-	.	Parent=CGI_10007660;
	scaffold42766	TRF	Tandem_Repeat	2938	2987	55	+	.	.
scaffold42766	subtractBed	intrn	3287	3574	.	-	.	Parent=CGI_10007660;
	scaffold42766	WUBlastX	DNA_hAT-Tip100	3287	3574	97	-	.	.
scaffold42766	subtractBed	intrn	3338	4870	.	-	.	Parent=CGI_10007660;
	scaffold42766	WUBlastX	DNA_hAT-Tip100	3338	4870	337	-	.	.
scaffold42766	subtractBed	intrn	4016	5185	.	-	.	Parent=CGI_10007660;
	scaffold42766	WUBlastX	DNA_hAT-Charlie	4016	5185	33	-	.	.
scaffold42766	subtractBed	intrn	5309	5530	.	-	.	Parent=CGI_10007660;
	scaffold42766	WUBlastX	DNA_hAT-Tip100	5309	5530	34	-	.	.
scaffold42766	subtractBed	intrn	140448	140491	.	+	.	Parent=CGI_10007664;
	scaffold42766	TRF	Tandem_Repeat	140448	140491	79	+	.	.
scaffold42766	subtractBed	intrn	140815	140857	.	+	.	Parent=CGI_10007664;
	scaffold42766	TRF	Tandem_Repeat	140815	140857	86	+	.	.
scaffold42766	subtractBed	intrn	176891	176932	.	+	.	Parent=CGI_10007667;
	scaffold42766	TRF	Tandem_Repeat	176891	176932	52	+	.	.
scaffold42770	subtractBed	intrn	16701	16877	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1	16701	16877	68	-	.	.
scaffold42770	subtractBed	intrn	16943	17152	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1	16943	17152	35	-	.	.
scaffold42770	subtractBed	intrn	16555	16707	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1	16555	16707	35	-	.	.
scaffold42770	subtractBed	intrn	16692	16916	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	16692	16916	43	-	.	.
scaffold42770	subtractBed	intrn	16979	17152	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	16979	17152	40	-	.	.
scaffold42770	subtractBed	intrn	16273	16968	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	16273	16968	29	-	.	.
scaffold42770	subtractBed	intrn	27848	28860	.	-	.	Parent=CGI_10007687;
	scaffold42770	TRF	Tandem_Repeat	27848	28860	991	+	.	.
scaffold42770	subtractBed	intrn	26034	26216	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	26034	26216	55	-	.	.
scaffold42770	subtractBed	intrn	25983	26174	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	25983	26174	92	-	.	.
scaffold42770	subtractBed	intrn	25923	26180	.	-	.	Parent=CGI_10007687;
	scaffold42770	WUBlastX	LINE_L1-Tx1	25923	26180	74	-	.	.
scaffold42770	subtractBed	intrn	30240	30294	.	-	.	Parent=CGI_10007687;
	scaffold42770	TRF	Tandem_Repeat	30240	30294	83	+	.	.
scaffold42770	subtractBed	intrn	31890	31921	.	-	.	Parent=CGI_10007687;
	scaffold42770	TRF	Tandem_Repeat	31890	31921	50	+	.	.
scaffold42770	subtractBed	intrn	186726	186880	.	-	.	Parent=CGI_10007692;
	scaffold42770	TRF	Tandem_Repeat	186726	186880	143	+	.	.
scaffold42776	subtractBed	intrn	25373	25429	.	+	.	Parent=CGI_10007705;
	scaffold42776	TRF	Tandem_Repeat	25373	25429	114	+	.	.
scaffold42776	subtractBed	intrn	49354	50060	.	-	.	Parent=CGI_10007707;
	scaffold42776	TRF	Tandem_Repeat	49354	50060	849	+	.	.
scaffold42776	subtractBed	intrn	52027	52091	.	-	.	Parent=CGI_10007707;
	scaffold42776	TRF	Tandem_Repeat	52027	52091	66	+	.	.
scaffold42776	subtractBed	intrn	123966	124017	.	+	.	Parent=CGI_10007712;
	scaffold42776	TRF	Tandem_Repeat	123966	124017	104	+	.	.
scaffold42776	subtractBed	intrn	136251	136294	.	+	.	Parent=CGI_10007713;
	scaffold42776	TRF	Tandem_Repeat	136251	136294	88	+	.	.
scaffold42776	subtractBed	intrn	156682	156727	.	+	.	Parent=CGI_10007713;
	scaffold42776	TRF	Tandem_Repeat	156682	156727	92	+	.	.
scaffold42776	subtractBed	intrn	159491	159553	.	+	.	Parent=CGI_10007713;
	scaffold42776	TRF	Tandem_Repeat	159491	159553	126	+	.	.
scaffold42784	subtractBed	intrn	54848	55336	.	+	.	Parent=CGI_10007732;
	scaffold42784	WUBlastX	DNA_hAT-hATw	54848	55336	47	-	.	.
scaffold42784	subtractBed	intrn	59740	59788	.	+	.	Parent=CGI_10007732;
	scaffold42784	TRF	Tandem_Repeat	59740	59788	89	+	.	.
scaffold42784	subtractBed	intrn	59788	59820	.	+	.	Parent=CGI_10007732;
	scaffold42784	TRF	Tandem_Repeat	59788	59820	66	+	.	.
scaffold42784	subtractBed	intrn	59850	59880	.	+	.	Parent=CGI_10007732;
	scaffold42784	TRF	Tandem_Repeat	59850	59880	62	+	.	.
scaffold42784	subtractBed	intrn	70501	70592	.	+	.	Parent=CGI_10007733;
	scaffold42784	TRF	Tandem_Repeat	70501	70592	175	+	.	.
scaffold42784	subtractBed	intrn	73714	73789	.	+	.	Parent=CGI_10007733;
	scaffold42784	TRF	Tandem_Repeat	73714	73789	107	+	.	.
scaffold42784	subtractBed	intrn	73715	73789	.	+	.	Parent=CGI_10007733;
	scaffold42784	TRF	Tandem_Repeat	73715	73789	123	+	.	.
scaffold42784	subtractBed	intrn	80215	80458	.	-	.	Parent=CGI_10007734;
	scaffold42784	TRF	Tandem_Repeat	80185	80458	347	+	.	.
scaffold42784	subtractBed	intrn	120613	120683	.	+	.	Parent=CGI_10007739;
	scaffold42784	TRF	Tandem_Repeat	120613	120683	142	+	.	.
scaffold42784	subtractBed	intrn	125679	125752	.	+	.	Parent=CGI_10007739;
	scaffold42784	TRF	Tandem_Repeat	125679	125752	148	+	.	.
scaffold42784	subtractBed	intrn	128599	129077	.	+	.	Parent=CGI_10007739;
	scaffold42784	TRF	Tandem_Repeat	128599	129077	527	+	.	.
scaffold42784	subtractBed	intrn	140944	141002	.	-	.	Parent=CGI_10007740;
	scaffold42784	TRF	Tandem_Repeat	140944	141002	118	+	.	.
scaffold42784	subtractBed	intrn	141282	141331	.	-	.	Parent=CGI_10007740;
	scaffold42784	TRF	Tandem_Repeat	141282	141331	91	+	.	.
scaffold42784	subtractBed	intrn	157282	157314	.	-	.	Parent=CGI_10007742;
	scaffold42784	TRF	Tandem_Repeat	157282	157314	66	+	.	.
scaffold42784	subtractBed	intrn	158127	158194	.	-	.	Parent=CGI_10007742;
	scaffold42784	TRF	Tandem_Repeat	158127	158194	136	+	.	.
scaffold42784	subtractBed	intrn	175669	176255	.	+	.	Parent=CGI_10007744;
	scaffold42784	TRF	Tandem_Repeat	175669	176255	586	+	.	.
scaffold42784	subtractBed	intrn	175669	176255	.	+	.	Parent=CGI_10007744;
	scaffold42784	TRF	Tandem_Repeat	175669	176255	739	+	.	.
scaffold42784	subtractBed	intrn	175669	176255	.	+	.	Parent=CGI_10007744;
	scaffold42784	TRF	Tandem_Repeat	175669	176255	739	+	.	.
scaffold42784	subtractBed	intrn	183272	183296	.	+	.	Parent=CGI_10007744;
	scaffold42784	TRF	Tandem_Repeat	183272	183296	50	+	.	.
scaffold42784	subtractBed	intrn	188091	188151	.	+	.	Parent=CGI_10007744;
	scaffold42784	TRF	Tandem_Repeat	188091	188151	122	+	.	.
scaffold42788	subtractBed	intrn	26088	26396	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	LINE_L2	26088	26396	110	-	.	.
scaffold42788	subtractBed	intrn	26127	26471	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	LINE_CR1-L2	26127	26471	21	-	.	.
scaffold42788	subtractBed	intrn	40622	40680	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	40622	40680	59	+	.	.
scaffold42788	subtractBed	intrn	40881	40965	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	40881	40965	170	+	.	.
scaffold42788	subtractBed	intrn	55891	55923	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	55891	55923	66	+	.	.
scaffold42788	subtractBed	intrn	61136	61176	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	61136	61176	82	+	.	.
scaffold42788	subtractBed	intrn	61286	61597	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	61286	61597	244	+	.	.
scaffold42788	subtractBed	intrn	67707	68066	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	DNA_TcMar-Tc1	67707	68066	83	+	.	.
scaffold42788	subtractBed	intrn	67237	67758	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	DNA_TcMar-Tc1	67237	67758	49	+	.	.
scaffold42788	subtractBed	intrn	67803	68123	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	DNA_TcMar-Tc1	67803	68123	53	+	.	.
scaffold42788	subtractBed	intrn	67803	68186	.	-	.	Parent=CGI_10007754;
	scaffold42788	WUBlastX	DNA_TcMar-Tc1	67803	68186	32	+	.	.
scaffold42788	subtractBed	intrn	84468	84501	.	-	.	Parent=CGI_10007754;
	scaffold42788	TRF	Tandem_Repeat	84468	84501	50	+	.	.
scaffold42788	subtractBed	intrn	104893	104980	.	+	.	Parent=CGI_10007755;
	scaffold42788	TRF	Tandem_Repeat	104893	104980	81	+	.	.
scaffold42788	subtractBed	intrn	105912	106076	.	+	.	Parent=CGI_10007755;
	scaffold42788	WUBlastX	LINE_L1-Tx1	105912	106076	43	+	.	.
scaffold42788	subtractBed	intrn	106079	106843	.	+	.	Parent=CGI_10007755;
	scaffold42788	WUBlastX	LINE_L1-Tx1	106079	106843	60	+	.	.
scaffold42788	subtractBed	intrn	106343	106813	.	+	.	Parent=CGI_10007755;
	scaffold42788	WUBlastX	LINE_L1-Tx1	106343	106813	102	+	.	.
scaffold42788	subtractBed	intrn	118044	118114	.	+	.	Parent=CGI_10007755;
	scaffold42788	TRF	Tandem_Repeat	118044	118114	142	+	.	.
scaffold42788	subtractBed	intrn	123893	124243	.	+	.	Parent=CGI_10007755;
	scaffold42788	WUBlastX	LINE_L1-Tx1	123893	124243	89	-	.	.
scaffold42788	subtractBed	intrn	132895	132929	.	+	.	Parent=CGI_10007755;
	scaffold42788	TRF	Tandem_Repeat	132895	132929	70	+	.	.
scaffold42788	subtractBed	intrn	138499	138524	.	+	.	Parent=CGI_10007755;
	scaffold42788	TRF	Tandem_Repeat	138499	138524	52	+	.	.
scaffold42790	subtractBed	intrn	23443	23502	.	-	.	Parent=CGI_10007716;
	scaffold42790	TRF	Tandem_Repeat	23443	23502	120	+	.	.
scaffold42790	subtractBed	intrn	30015	30455	.	-	.	Parent=CGI_10007717;
	scaffold42790	TRF	Tandem_Repeat	30015	30455	571	+	.	.
scaffold42790	subtractBed	intrn	31363	31619	.	-	.	Parent=CGI_10007717;
	scaffold42790	TRF	Tandem_Repeat	31363	31619	273	+	.	.
scaffold42790	subtractBed	intrn	51085	51128	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	51085	51128	88	+	.	.
scaffold42790	subtractBed	intrn	51647	51907	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	51647	51907	267	+	.	.
scaffold42790	subtractBed	intrn	52515	52894	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	52515	52894	584	+	.	.
scaffold42790	subtractBed	intrn	52810	53143	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	52810	53143	252	+	.	.
scaffold42790	subtractBed	intrn	54668	54978	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	54668	54978	333	+	.	.
scaffold42790	subtractBed	intrn	54655	54939	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	54655	54939	448	+	.	.
scaffold42790	subtractBed	intrn	54810	54978	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	54810	54978	278	+	.	.
scaffold42790	subtractBed	intrn	55532	55959	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	55532	55959	667	+	.	.
scaffold42790	subtractBed	intrn	56412	56450	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	56412	56450	78	+	.	.
scaffold42790	subtractBed	intrn	56809	56886	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	56809	56886	120	+	.	.
scaffold42790	subtractBed	intrn	56792	56881	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	56792	56881	98	+	.	.
scaffold42790	subtractBed	intrn	60146	60197	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	60146	60197	68	+	.	.
scaffold42790	subtractBed	intrn	60298	60325	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	60298	60325	56	+	.	.
scaffold42790	subtractBed	intrn	62832	62873	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	62832	62873	84	+	.	.
scaffold42790	subtractBed	intrn	67777	67821	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	67777	67821	90	+	.	.
scaffold42790	subtractBed	intrn	69759	70339	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	69759	70339	689	+	.	.
scaffold42790	subtractBed	intrn	69760	70339	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	69760	70339	688	+	.	.
scaffold42790	subtractBed	intrn	71641	71799	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	71641	71799	126	+	.	.
scaffold42790	subtractBed	intrn	72771	72904	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	72771	72904	250	+	.	.
scaffold42790	subtractBed	intrn	78256	78354	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	78256	78354	180	+	.	.
scaffold42790	subtractBed	intrn	79229	79561	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	79229	79561	477	+	.	.
scaffold42790	subtractBed	intrn	79229	79561	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	79229	79561	463	+	.	.
scaffold42790	subtractBed	intrn	79229	79502	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	79229	79502	431	+	.	.
scaffold42790	subtractBed	intrn	84725	84772	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	84725	84772	96	+	.	.
scaffold42790	subtractBed	intrn	87622	87736	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	87622	87736	63	+	.	.
scaffold42790	subtractBed	intrn	93232	93549	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	93232	93549	618	+	.	.
scaffold42790	subtractBed	intrn	94316	94457	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	94316	94457	152	+	.	.
scaffold42790	subtractBed	intrn	94914	95169	.	-	.	Parent=CGI_10007718;
	scaffold42790	TRF	Tandem_Repeat	94914	95169	431	+	.	.
scaffold42790	subtractBed	intrn	183727	183973	.	-	.	Parent=CGI_10007719;
	scaffold42790	TRF	Tandem_Repeat	183727	183973	381	+	.	.
scaffold42790	subtractBed	intrn	186125	186961	.	-	.	Parent=CGI_10007719;
	scaffold42790	WUBlastX	LINE_Penelope	186125	186961	191	-	.	.
scaffold42790	subtractBed	intrn	186970	187524	.	-	.	Parent=CGI_10007719;
	scaffold42790	WUBlastX	LINE_Penelope	186970	187524	312	-	.	.
scaffold42790	subtractBed	intrn	184363	184527	.	-	.	Parent=CGI_10007719;
	scaffold42790	WUBlastX	DNA_Harbinger	184363	184527	58	-	.	.
scaffold42790	subtractBed	intrn	186985	187620	.	-	.	Parent=CGI_10007719;
	scaffold42790	WUBlastX	LINE_Penelope	186985	187620	100	-	.	.
scaffold42790	subtractBed	intrn	186985	187767	.	-	.	Parent=CGI_10007719;
	scaffold42790	WUBlastX	LINE_Penelope	186985	187767	81	-	.	.
scaffold42794	subtractBed	intrn	55986	56860	.	+	.	Parent=CGI_10007695;
	scaffold42794	TRF	Tandem_Repeat	55986	56860	1174	+	.	.
scaffold42794	subtractBed	intrn	58436	60859	.	+	.	Parent=CGI_10007695;
	scaffold42794	TRF	Tandem_Repeat	58436	60859	3508	+	.	.
scaffold42794	subtractBed	intrn	58436	60859	.	+	.	Parent=CGI_10007695;
	scaffold42794	TRF	Tandem_Repeat	58436	60859	3585	+	.	.
scaffold42794	subtractBed	intrn	68457	68533	.	+	.	Parent=CGI_10007697;
	scaffold42794	TRF	Tandem_Repeat	68457	68533	131	+	.	.
scaffold42794	subtractBed	intrn	70312	70365	.	+	.	Parent=CGI_10007697;
	scaffold42794	TRF	Tandem_Repeat	70312	70365	108	+	.	.
scaffold42794	subtractBed	intrn	74686	74727	.	+	.	Parent=CGI_10007697;
	scaffold42794	TRF	Tandem_Repeat	74686	74727	84	+	.	.
scaffold42794	subtractBed	intrn	83511	83562	.	+	.	Parent=CGI_10007697;
	scaffold42794	TRF	Tandem_Repeat	83511	83562	104	+	.	.
scaffold42794	subtractBed	intrn	119192	119232	.	+	.	Parent=CGI_10007698;
	scaffold42794	TRF	Tandem_Repeat	119192	119232	82	+	.	.
scaffold42794	subtractBed	intrn	139538	139837	.	+	.	Parent=CGI_10007699;
	scaffold42794	TRF	Tandem_Repeat	139529	139837	514	+	.	.
scaffold42794	subtractBed	intrn	175104	175153	.	-	.	Parent=CGI_10007702;
	scaffold42794	TRF	Tandem_Repeat	175104	175153	100	+	.	.
scaffold42794	subtractBed	intrn	178130	178181	.	-	.	Parent=CGI_10007702;
	scaffold42794	TRF	Tandem_Repeat	178130	178181	104	+	.	.
scaffold42794	subtractBed	intrn	179468	179517	.	-	.	Parent=CGI_10007702;
	scaffold42794	TRF	Tandem_Repeat	179468	179517	100	+	.	.
scaffold42804	subtractBed	intrn	79734	80054	.	+	.	Parent=CGI_10007779;
	scaffold42804	WUBlastX	LTR_Gypsy-Cigr	79734	80054	69	-	.	.
scaffold42804	subtractBed	intrn	83228	83320	.	+	.	Parent=CGI_10007779;
	scaffold42804	TRF	Tandem_Repeat	83228	83320	143	+	.	.
scaffold42804	subtractBed	intrn	84054	84187	.	+	.	Parent=CGI_10007779;
	scaffold42804	TRF	Tandem_Repeat	84054	84187	112	+	.	.
scaffold42804	subtractBed	intrn	158850	159218	.	-	.	Parent=CGI_10007780;
	scaffold42804	WUBlastX	LINE_L1-Tx1	158850	159218	61	-	.	.
scaffold42804	subtractBed	intrn	158829	159371	.	-	.	Parent=CGI_10007780;
	scaffold42804	WUBlastX	LINE_L1	158829	159371	39	-	.	.
scaffold42804	subtractBed	intrn	173383	173417	.	+	.	Parent=CGI_10007781;
	scaffold42804	TRF	Tandem_Repeat	173383	173417	61	+	.	.
scaffold42836	subtractBed	intrn	38877	38921	.	-	.	Parent=CGI_10007855;
	scaffold42836	TRF	Tandem_Repeat	38877	38921	90	+	.	.
scaffold42836	subtractBed	intrn	72601	72669	.	+	.	Parent=CGI_10007859;
	scaffold42836	TRF	Tandem_Repeat	72601	72669	138	+	.	.
scaffold42836	subtractBed	intrn	73566	73614	.	+	.	Parent=CGI_10007859;
	scaffold42836	TRF	Tandem_Repeat	73566	73614	50	+	.	.
scaffold42836	subtractBed	intrn	78666	78712	.	+	.	Parent=CGI_10007859;
	scaffold42836	TRF	Tandem_Repeat	78666	78712	85	+	.	.
scaffold42836	subtractBed	intrn	106777	106942	.	+	.	Parent=CGI_10007860;
	scaffold42836	TRF	Tandem_Repeat	106777	106942	296	+	.	.
scaffold42836	subtractBed	intrn	107168	107269	.	+	.	Parent=CGI_10007860;
	scaffold42836	WUBlastX	LTR_Gypsy	107168	107269	25	+	.	.
scaffold42836	subtractBed	intrn	111618	111669	.	+	.	Parent=CGI_10007860;
	scaffold42836	TRF	Tandem_Repeat	111618	111669	68	+	.	.
scaffold42836	subtractBed	intrn	111934	111936	.	+	.	Parent=CGI_10007860;
	scaffold42836	WUBlastX	LTR_Gypsy	111934	111987	28	+	.	.
scaffold42836	subtractBed	intrn	114514	114642	.	+	.	Parent=CGI_10007860;
	scaffold42836	WUBlastX	LTR_Gypsy	114514	114642	31	+	.	.
scaffold42836	subtractBed	intrn	117467	117529	.	+	.	Parent=CGI_10007860;
	scaffold42836	TRF	Tandem_Repeat	117467	117529	126	+	.	.
scaffold42836	subtractBed	intrn	132007	132066	.	+	.	Parent=CGI_10007861;
	scaffold42836	TRF	Tandem_Repeat	132007	132066	61	+	.	.
scaffold42836	subtractBed	intrn	135631	135671	.	+	.	Parent=CGI_10007861;
	scaffold42836	TRF	Tandem_Repeat	135631	135671	82	+	.	.
scaffold42836	subtractBed	intrn	135721	135770	.	+	.	Parent=CGI_10007861;
	scaffold42836	TRF	Tandem_Repeat	135721	135770	91	+	.	.
scaffold42836	subtractBed	intrn	144342	144387	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	144342	144387	92	+	.	.
scaffold42836	subtractBed	intrn	151034	151707	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	151034	151707	1143	+	.	.
scaffold42836	subtractBed	intrn	155717	155758	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	155717	155758	75	+	.	.
scaffold42836	subtractBed	intrn	157976	158023	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	157976	158023	96	+	.	.
scaffold42836	subtractBed	intrn	160479	160659	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	160479	160659	132	+	.	.
scaffold42836	subtractBed	intrn	160479	160863	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	160479	160863	413	+	.	.
scaffold42836	subtractBed	intrn	160951	161413	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	160951	161413	719	+	.	.
scaffold42836	subtractBed	intrn	161416	161508	.	+	.	Parent=CGI_10007862;
	scaffold42836	WUBlastX	LTR_Gypsy	161416	161508	21	+	.	.
scaffold42836	subtractBed	intrn	167153	168379	.	+	.	Parent=CGI_10007862;
	scaffold42836	WUBlastX	LINE_RTE-X	167153	168379	392	+	.	.
scaffold42836	subtractBed	intrn	168758	168762	.	+	.	Parent=CGI_10007862;
	scaffold42836	WUBlastX	LINE_CR1	168758	168832	21	+	.	.
scaffold42836	subtractBed	intrn	172684	172727	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	172684	172727	52	+	.	.
scaffold42836	subtractBed	intrn	179501	179537	.	+	.	Parent=CGI_10007862;
	scaffold42836	TRF	Tandem_Repeat	179501	179537	74	+	.	.
scaffold42836	subtractBed	intrn	189264	189335	.	+	.	Parent=CGI_10007863;
	scaffold42836	TRF	Tandem_Repeat	189264	189335	108	+	.	.
scaffold42836	subtractBed	intrn	189264	189332	.	+	.	Parent=CGI_10007863;
	scaffold42836	TRF	Tandem_Repeat	189264	189332	102	+	.	.
scaffold42840	subtractBed	intrn	3697	4022	.	+	.	Parent=CGI_10007830;
	scaffold42840	TRF	Tandem_Repeat	3697	4022	517	+	.	.
scaffold42840	subtractBed	intrn	2609	3058	.	+	.	Parent=CGI_10007830;
	scaffold42840	WUBlastX	LINE_RTE-X	2609	3058	126	+	.	.
scaffold42840	subtractBed	intrn	2606	3184	.	+	.	Parent=CGI_10007830;
	scaffold42840	WUBlastX	LINE_RTE-X	2606	3184	103	+	.	.
scaffold42840	subtractBed	intrn	63700	65076	.	+	.	Parent=CGI_10007833;
	scaffold42840	WUBlastX	LINE_L2	63700	65076	42	-	.	.
scaffold42840	subtractBed	intrn	62469	63494	.	+	.	Parent=CGI_10007833;
	scaffold42840	WUBlastX	LINE_RTE-X	62469	63494	437	-	.	.
scaffold42840	subtractBed	intrn	63487	64734	.	+	.	Parent=CGI_10007833;
	scaffold42840	WUBlastX	LINE_RTE-X	63487	64734	644	-	.	.
scaffold42840	subtractBed	intrn	72680	72961	.	+	.	Parent=CGI_10007834;
	scaffold42840	TRF	Tandem_Repeat	72680	72961	485	+	.	.
scaffold42840	subtractBed	intrn	72818	72927	.	+	.	Parent=CGI_10007834;
	scaffold42840	TRF	Tandem_Repeat	72818	72927	61	+	.	.
scaffold42840	subtractBed	intrn	104078	104231	.	-	.	Parent=CGI_10007835;
	scaffold42840	TRF	Tandem_Repeat	104078	104231	68	+	.	.
scaffold42840	subtractBed	intrn	120166	120570	.	-	.	Parent=CGI_10007835;
	scaffold42840	WUBlastX	DNA_Crypton	120166	120570	88	-	.	.
scaffold42840	subtractBed	intrn	120298	120549	.	-	.	Parent=CGI_10007835;
	scaffold42840	WUBlastX	DNA_Crypton	120298	120549	98	-	.	.
scaffold42840	subtractBed	intrn	139279	139791	.	-	.	Parent=CGI_10007836;
	scaffold42840	WUBlastX	LINE_RTE-X	139279	139791	161	+	.	.
scaffold42840	subtractBed	intrn	139411	139779	.	-	.	Parent=CGI_10007836;
	scaffold42840	WUBlastX	LINE_RTE-X	139411	139779	180	+	.	.
scaffold42840	subtractBed	intrn	153196	153223	.	-	.	Parent=CGI_10007837;
	scaffold42840	TRF	Tandem_Repeat	153196	153223	56	+	.	.
scaffold42840	subtractBed	intrn	180682	180729	.	-	.	Parent=CGI_10007840;
	scaffold42840	TRF	Tandem_Repeat	180682	180729	96	+	.	.
scaffold42840	subtractBed	intrn	186057	186464	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	DNA_TcMar-Marin	186057	186464	87	-	.	.
scaffold42840	subtractBed	intrn	185706	185801	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	DNA_TcMar-Marin	185706	185801	45	-	.	.
scaffold42840	subtractBed	intrn	185845	185991	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	DNA_TcMar-Marin	185845	185991	32	-	.	.
scaffold42840	subtractBed	intrn	188273	188380	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_L2	188273	188380	70	+	.	.
scaffold42840	subtractBed	intrn	188219	188365	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_L2	188219	188365	34	+	.	.
scaffold42840	subtractBed	intrn	188383	188742	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_L2	188383	188742	201	+	.	.
scaffold42840	subtractBed	intrn	188246	188380	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_L2	188246	188380	61	+	.	.
scaffold42840	subtractBed	intrn	188371	189366	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_L2	188371	189366	105	+	.	.
scaffold42840	subtractBed	intrn	187971	188168	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	187971	188168	24	+	.	.
scaffold42840	subtractBed	intrn	190885	191133	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	190885	191133	103	+	.	.
scaffold42840	subtractBed	intrn	190822	191133	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	190822	191133	55	+	.	.
scaffold42840	subtractBed	intrn	191157	191456	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	191157	191456	119	+	.	.
scaffold42840	subtractBed	intrn	190796	190918	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	190796	190918	46	+	.	.
scaffold42840	subtractBed	intrn	190754	190870	.	-	.	Parent=CGI_10007840;
	scaffold42840	WUBlastX	LINE_CR1	190754	190870	23	+	.	.
scaffold42850	subtractBed	intrn	10738	11187	.	+	.	Parent=CGI_10007918;
	scaffold42850	WUBlastX	LINE_RTE-X	10738	11187	73	+	.	.
scaffold42850	subtractBed	intrn	10831	11076	.	+	.	Parent=CGI_10007918;
	scaffold42850	WUBlastX	LINE_RTE-X	10831	11076	120	+	.	.
scaffold42850	subtractBed	intrn	10726	11046	.	+	.	Parent=CGI_10007918;
	scaffold42850	WUBlastX	LINE_RTE-X	10726	11046	105	+	.	.
scaffold42850	subtractBed	intrn	23244	23561	.	-	.	Parent=CGI_10007919;
	scaffold42850	TRF	Tandem_Repeat	23244	23593	551	+	.	.
scaffold42850	subtractBed	intrn	46347	47313	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	46347	47313	1569	+	.	.
scaffold42850	subtractBed	intrn	47300	47524	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	47300	47524	409	+	.	.
scaffold42850	subtractBed	intrn	47780	47842	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	47780	47842	126	+	.	.
scaffold42850	subtractBed	intrn	52422	52453	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	52422	52453	64	+	.	.
scaffold42850	subtractBed	intrn	65430	65456	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	65430	65456	54	+	.	.
scaffold42850	subtractBed	intrn	66751	67044	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	66751	67044	66	+	.	.
scaffold42850	subtractBed	intrn	66746	67593	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	66746	67593	1326	+	.	.
scaffold42850	subtractBed	intrn	67876	67913	.	-	.	Parent=CGI_10007921;
	scaffold42850	TRF	Tandem_Repeat	67876	67913	69	+	.	.
scaffold42850	subtractBed	intrn	52422	52453	.	+	.	Parent=CGI_10007922;
	scaffold42850	TRF	Tandem_Repeat	52422	52453	64	+	.	.
scaffold42850	subtractBed	intrn	106323	106487	.	+	.	Parent=CGI_10007926;
	scaffold42850	TRF	Tandem_Repeat	106323	106487	226	+	.	.
scaffold42850	subtractBed	intrn	117309	117452	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	117309	117452	85	+	.	.
scaffold42850	subtractBed	intrn	118463	119257	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	118463	119257	774	+	.	.
scaffold42850	subtractBed	intrn	119303	119340	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	119303	119340	60	+	.	.
scaffold42850	subtractBed	intrn	121536	121691	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	121536	121691	264	+	.	.
scaffold42850	subtractBed	intrn	123863	123916	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	123863	123916	63	+	.	.
scaffold42850	subtractBed	intrn	123864	123907	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	123864	123907	88	+	.	.
scaffold42850	subtractBed	intrn	124988	125510	.	-	.	Parent=CGI_10007927;
	scaffold42850	TRF	Tandem_Repeat	124988	125510	331	+	.	.
scaffold42850	subtractBed	intrn	149650	149904	.	+	.	Parent=CGI_10007928;
	scaffold42850	TRF	Tandem_Repeat	149650	149904	198	+	.	.
scaffold42850	subtractBed	intrn	182504	182817	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	182504	182817	628	+	.	.
scaffold42850	subtractBed	intrn	187706	187744	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	187706	187744	51	+	.	.
scaffold42850	subtractBed	intrn	187707	187744	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	187707	187744	67	+	.	.
scaffold42850	subtractBed	intrn	187914	188775	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	187914	188775	1400	+	.	.
scaffold42850	subtractBed	intrn	190025	190447	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	190025	190447	524	+	.	.
scaffold42850	subtractBed	intrn	193070	193545	.	+	.	Parent=CGI_10007930;
	scaffold42850	TRF	Tandem_Repeat	193070	193545	717	+	.	.
scaffold42850	subtractBed	intrn	182504	182817	.	-	.	Parent=CGI_10007931;
	scaffold42850	TRF	Tandem_Repeat	182504	182817	628	+	.	.
scaffold42866	subtractBed	intrn	5097	5465	.	+	.	Parent=CGI_10007989;
	scaffold42866	WUBlastX	LTR_Pao	5097	5465	314	-	.	.
scaffold42866	subtractBed	intrn	5100	5678	.	+	.	Parent=CGI_10007989;
	scaffold42866	WUBlastX	LTR_Pao	5100	5678	286	-	.	.
scaffold42866	subtractBed	intrn	5031	5417	.	+	.	Parent=CGI_10007989;
	scaffold42866	WUBlastX	LTR_Pao	5031	5417	64	-	.	.
scaffold42866	subtractBed	intrn	20210	20241	.	+	.	Parent=CGI_10007989;
	scaffold42866	TRF	Tandem_Repeat	20210	20241	64	+	.	.
scaffold42866	subtractBed	intrn	34492	34521	.	+	.	Parent=CGI_10007990;
	scaffold42866	TRF	Tandem_Repeat	34492	34521	53	+	.	.
scaffold42866	subtractBed	intrn	39883	39929	.	+	.	Parent=CGI_10007990;
	scaffold42866	TRF	Tandem_Repeat	39883	39929	51	+	.	.
scaffold42866	subtractBed	intrn	73095	73158	.	+	.	Parent=CGI_10007991;
	scaffold42866	TRF	Tandem_Repeat	73095	73158	128	+	.	.
scaffold42866	subtractBed	intrn	71251	72201	.	+	.	Parent=CGI_10007991;
	scaffold42866	WUBlastX	DNA_IS4EU	71251	72201	102	-	.	.
scaffold42866	subtractBed	intrn	71332	71997	.	+	.	Parent=CGI_10007991;
	scaffold42866	WUBlastX	DNA_IS4EU	71332	71997	105	-	.	.
scaffold42866	subtractBed	intrn	71251	71763	.	+	.	Parent=CGI_10007991;
	scaffold42866	WUBlastX	DNA_IS4EU	71251	71763	113	-	.	.
scaffold42866	subtractBed	intrn	124480	124532	.	+	.	Parent=CGI_10007992;
	scaffold42866	TRF	Tandem_Repeat	124480	124532	106	+	.	.
scaffold42866	subtractBed	intrn	130219	130310	.	+	.	Parent=CGI_10007992;
	scaffold42866	TRF	Tandem_Repeat	130219	130310	78	+	.	.
scaffold42866	subtractBed	intrn	130612	130705	.	+	.	Parent=CGI_10007992;
	scaffold42866	TRF	Tandem_Repeat	130612	130705	125	+	.	.
scaffold42866	subtractBed	intrn	132061	132718	.	+	.	Parent=CGI_10007992;
	scaffold42866	TRF	Tandem_Repeat	132061	132718	775	+	.	.
scaffold42866	subtractBed	intrn	145790	145843	.	+	.	Parent=CGI_10007993;
	scaffold42866	TRF	Tandem_Repeat	145790	145843	99	+	.	.
scaffold42866	subtractBed	intrn	149030	149139	.	+	.	Parent=CGI_10007993;
	scaffold42866	TRF	Tandem_Repeat	149030	149139	122	+	.	.
scaffold42880	subtractBed	intrn	191584	191653	.	-	.	Parent=CGI_10007998;
	scaffold42880	TRF	Tandem_Repeat	191584	191653	50	+	.	.
scaffold42880	subtractBed	intrn	191551	192166	.	-	.	Parent=CGI_10007998;
	scaffold42880	TRF	Tandem_Repeat	191551	192166	894	+	.	.
scaffold42880	subtractBed	intrn	185430	185675	.	-	.	Parent=CGI_10007998;
	scaffold42880	WUBlastX	LINE_RTE-BovB	185430	185675	99	+	.	.
scaffold42880	subtractBed	intrn	185992	188925	.	-	.	Parent=CGI_10007998;
	scaffold42880	WUBlastX	LINE_L1	185992	188925	1100	+	.	.
scaffold42880	subtractBed	intrn	186826	188925	.	-	.	Parent=CGI_10007998;
	scaffold42880	WUBlastX	LINE_L1-Tx1	186826	188925	1176	+	.	.
scaffold42890	subtractBed	intrn	7232	7277	.	-	.	Parent=CGI_10008034;
	scaffold42890	TRF	Tandem_Repeat	7232	7277	92	+	.	.
scaffold42890	subtractBed	intrn	40751	40803	.	+	.	Parent=CGI_10008038;
	scaffold42890	TRF	Tandem_Repeat	40751	40803	97	+	.	.
scaffold42890	subtractBed	intrn	41000	41532	.	+	.	Parent=CGI_10008038;
	scaffold42890	TRF	Tandem_Repeat	41000	41532	868	+	.	.
scaffold42890	subtractBed	intrn	46865	46912	.	+	.	Parent=CGI_10008038;
	scaffold42890	TRF	Tandem_Repeat	46865	46912	87	+	.	.
scaffold42890	subtractBed	intrn	77126	77731	.	+	.	Parent=CGI_10008039;
	scaffold42890	TRF	Tandem_Repeat	77126	77731	184	+	.	.
scaffold42890	subtractBed	intrn	77138	77413	.	+	.	Parent=CGI_10008039;
	scaffold42890	TRF	Tandem_Repeat	77138	77413	254	+	.	.
scaffold42890	subtractBed	intrn	80297	81070	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	80297	81070	402	-	.	.
scaffold42890	subtractBed	intrn	82380	82664	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	82380	82724	354	-	.	.
scaffold42890	subtractBed	intrn	81943	82377	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	81943	82377	367	-	.	.
scaffold42890	subtractBed	intrn	80453	81937	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	80453	81937	534	-	.	.
scaffold42890	subtractBed	intrn	82707	82724	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	82380	82724	354	-	.	.
scaffold42890	subtractBed	intrn	86014	86139	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LINE_RTE-X	86014	86139	45	+	.	.
scaffold42890	subtractBed	intrn	82709	84166	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LTR_Gypsy	82709	84166	606	-	.	.
scaffold42890	subtractBed	intrn	86432	86557	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LINE_RTE-X	86432	86557	47	+	.	.
scaffold42890	subtractBed	intrn	85984	86151	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LINE_RTE-X	85984	86151	38	+	.	.
scaffold42890	subtractBed	intrn	85531	85602	.	+	.	Parent=CGI_10008039;
	scaffold42890	WUBlastX	LINE_RTE-X	85531	85602	33	+	.	.
scaffold42890	subtractBed	intrn	90010	90111	.	+	.	Parent=CGI_10008039;
	scaffold42890	TRF	Tandem_Repeat	90010	90111	77	+	.	.
scaffold42890	subtractBed	intrn	90483	90666	.	+	.	Parent=CGI_10008039;
	scaffold42890	TRF	Tandem_Repeat	90483	90666	117	+	.	.
scaffold42890	subtractBed	intrn	82707	82724	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LTR_Gypsy	82380	82724	354	-	.	.
scaffold42890	subtractBed	intrn	86014	86139	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LINE_RTE-X	86014	86139	45	+	.	.
scaffold42890	subtractBed	intrn	82709	84166	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LTR_Gypsy	82709	84166	606	-	.	.
scaffold42890	subtractBed	intrn	86432	86557	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LINE_RTE-X	86432	86557	47	+	.	.
scaffold42890	subtractBed	intrn	85984	86151	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LINE_RTE-X	85984	86151	38	+	.	.
scaffold42890	subtractBed	intrn	85531	85602	.	-	.	Parent=CGI_10008040;
	scaffold42890	WUBlastX	LINE_RTE-X	85531	85602	33	+	.	.
scaffold42890	subtractBed	intrn	90010	90111	.	-	.	Parent=CGI_10008040;
	scaffold42890	TRF	Tandem_Repeat	90010	90111	77	+	.	.
scaffold42890	subtractBed	intrn	90483	90666	.	-	.	Parent=CGI_10008040;
	scaffold42890	TRF	Tandem_Repeat	90483	90666	117	+	.	.
scaffold42890	subtractBed	intrn	104177	104290	.	+	.	Parent=CGI_10008041;
	scaffold42890	TRF	Tandem_Repeat	104177	104290	210	+	.	.
scaffold42890	subtractBed	intrn	110183	110424	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	110183	110459	527	+	.	.
scaffold42890	subtractBed	intrn	110851	111021	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	110851	111054	354	+	.	.
scaffold42890	subtractBed	intrn	111610	111761	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	111589	111761	140	+	.	.
scaffold42890	subtractBed	intrn	117281	118029	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	117281	118029	683	+	.	.
scaffold42890	subtractBed	intrn	119438	119733	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	119438	119733	432	+	.	.
scaffold42890	subtractBed	intrn	119661	119733	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	119661	119733	59	+	.	.
scaffold42890	subtractBed	intrn	121701	122249	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	121701	122267	440	+	.	.
scaffold42890	subtractBed	intrn	121726	121897	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	121726	121897	206	+	.	.
scaffold42890	subtractBed	intrn	121701	121999	.	-	.	Parent=CGI_10008042;
	scaffold42890	TRF	Tandem_Repeat	121701	121999	179	+	.	.
scaffold42890	subtractBed	intrn	140657	141390	.	-	.	Parent=CGI_10008044;
	scaffold42890	TRF	Tandem_Repeat	140657	141390	985	+	.	.
scaffold42890	subtractBed	intrn	142266	142864	.	-	.	Parent=CGI_10008044;
	scaffold42890	TRF	Tandem_Repeat	142266	142864	966	+	.	.
scaffold42890	subtractBed	intrn	184025	185131	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	DNA_Sola	184025	185131	339	-	.	.
scaffold42890	subtractBed	intrn	183876	184016	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	DNA_Sola	183876	184016	26	-	.	.
scaffold42890	subtractBed	intrn	183992	185536	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	DNA_Sola	183992	185536	274	-	.	.
scaffold42890	subtractBed	intrn	196453	196599	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	LINE_L1	196453	196599	79	+	.	.
scaffold42890	subtractBed	intrn	197032	197091	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	LINE_L1-Tx1	197032	197091	61	+	.	.
scaffold42890	subtractBed	intrn	196577	197038	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	LINE_L1-Tx1	196577	197038	171	+	.	.
scaffold42890	subtractBed	intrn	196493	197026	.	-	.	Parent=CGI_10008045;
	scaffold42890	WUBlastX	LINE_L1	196493	197026	125	+	.	.
scaffold42892	subtractBed	intrn	176556	176611	.	-	.	Parent=CGI_10008009;
	scaffold42892	TRF	Tandem_Repeat	176556	176611	112	+	.	.
scaffold42894	subtractBed	intrn	16771	17498	.	+	.	Parent=CGI_10008012;
	scaffold42894	TRF	Tandem_Repeat	16771	17498	581	+	.	.
scaffold42894	subtractBed	intrn	16784	17331	.	+	.	Parent=CGI_10008012;
	scaffold42894	TRF	Tandem_Repeat	16784	17331	503	+	.	.
scaffold42894	subtractBed	intrn	86742	86794	.	+	.	Parent=CGI_10008020;
	scaffold42894	TRF	Tandem_Repeat	86742	86794	70	+	.	.
scaffold42894	subtractBed	intrn	113054	113130	.	+	.	Parent=CGI_10008021;
	scaffold42894	TRF	Tandem_Repeat	113054	113130	127	+	.	.
scaffold42896	subtractBed	intrn	164867	164913	.	-	.	Parent=CGI_10008138;
	scaffold42896	TRF	Tandem_Repeat	164867	164913	94	+	.	.
scaffold42896	subtractBed	intrn	168438	168475	.	-	.	Parent=CGI_10008138;
	scaffold42896	TRF	Tandem_Repeat	168438	168475	76	+	.	.
scaffold42904	subtractBed	intrn	31502	31618	.	+	.	Parent=CGI_10008097;
	scaffold42904	TRF	Tandem_Repeat	31502	31618	128	+	.	.
scaffold42904	subtractBed	intrn	31501	31700	.	+	.	Parent=CGI_10008097;
	scaffold42904	TRF	Tandem_Repeat	31501	31700	104	+	.	.
scaffold42904	subtractBed	intrn	31701	31872	.	+	.	Parent=CGI_10008097;
	scaffold42904	TRF	Tandem_Repeat	31701	31872	164	+	.	.
scaffold42904	subtractBed	intrn	43592	43687	.	+	.	Parent=CGI_10008098;
	scaffold42904	WUBlastX	LTR_DIRS?	43592	43687	35	+	.	.
scaffold42904	subtractBed	intrn	43690	43869	.	+	.	Parent=CGI_10008098;
	scaffold42904	WUBlastX	LTR_DIRS	43690	43869	88	+	.	.
scaffold42904	subtractBed	intrn	43881	44162	.	+	.	Parent=CGI_10008098;
	scaffold42904	WUBlastX	LTR_DIRS	43881	44162	177	+	.	.
scaffold42904	subtractBed	intrn	50263	50375	.	-	.	Parent=CGI_10008099;
	scaffold42904	TRF	Tandem_Repeat	50263	50375	65	+	.	.
scaffold42904	subtractBed	intrn	74423	74450	.	-	.	Parent=CGI_10008100;
	scaffold42904	TRF	Tandem_Repeat	74423	74450	56	+	.	.
scaffold42904	subtractBed	intrn	101959	102522	.	-	.	Parent=CGI_10008103;
	scaffold42904	WUBlastX	DNA_Kolobok	101959	102522	77	+	.	.
scaffold42904	subtractBed	intrn	103409	103585	.	-	.	Parent=CGI_10008103;
	scaffold42904	WUBlastX	LINE_RTE-X	103409	103585	33	+	.	.
scaffold42904	subtractBed	intrn	103388	103537	.	-	.	Parent=CGI_10008103;
	scaffold42904	WUBlastX	LINE_RTE-X	103388	103537	35	+	.	.
scaffold42904	subtractBed	intrn	157392	157444	.	+	.	Parent=CGI_10008106;
	scaffold42904	TRF	Tandem_Repeat	157392	157444	52	+	.	.
scaffold42904	subtractBed	intrn	162254	163243	.	+	.	Parent=CGI_10008106;
	scaffold42904	TRF	Tandem_Repeat	162254	163243	848	+	.	.
scaffold42904	subtractBed	intrn	166686	167347	.	+	.	Parent=CGI_10008106;
	scaffold42904	TRF	Tandem_Repeat	166686	167347	946	+	.	.
scaffold42904	subtractBed	intrn	193971	194020	.	+	.	Parent=CGI_10008107;
	scaffold42904	TRF	Tandem_Repeat	193971	194020	100	+	.	.
scaffold42922	subtractBed	intrn	17979	18029	.	+	.	Parent=CGI_10008150;
	scaffold42922	TRF	Tandem_Repeat	17979	18029	102	+	.	.
scaffold42922	subtractBed	intrn	34593	34918	.	-	.	Parent=CGI_10008151;
	scaffold42922	TRF	Tandem_Repeat	34593	34918	459	+	.	.
scaffold42922	subtractBed	intrn	49022	49110	.	-	.	Parent=CGI_10008153;
	scaffold42922	TRF	Tandem_Repeat	49022	49110	79	+	.	.
scaffold42922	subtractBed	intrn	48967	49107	.	-	.	Parent=CGI_10008153;
	scaffold42922	TRF	Tandem_Repeat	48959	49107	235	+	.	.
scaffold42922	subtractBed	intrn	52215	52252	.	-	.	Parent=CGI_10008153;
	scaffold42922	TRF	Tandem_Repeat	52215	52252	76	+	.	.
scaffold42922	subtractBed	intrn	53520	53587	.	-	.	Parent=CGI_10008153;
	scaffold42922	TRF	Tandem_Repeat	53520	53587	59	+	.	.
scaffold42922	subtractBed	intrn	52215	52252	.	+	.	Parent=CGI_10008154;
	scaffold42922	TRF	Tandem_Repeat	52215	52252	76	+	.	.
scaffold42922	subtractBed	intrn	53520	53587	.	+	.	Parent=CGI_10008154;
	scaffold42922	TRF	Tandem_Repeat	53520	53587	59	+	.	.
scaffold42922	subtractBed	intrn	125306	125569	.	-	.	Parent=CGI_10008155;
	scaffold42922	TRF	Tandem_Repeat	125306	125569	258	+	.	.
scaffold42922	subtractBed	intrn	126118	126302	.	-	.	Parent=CGI_10008155;
	scaffold42922	TRF	Tandem_Repeat	126118	126302	352	+	.	.
scaffold42922	subtractBed	intrn	126330	126467	.	-	.	Parent=CGI_10008155;
	scaffold42922	TRF	Tandem_Repeat	126330	126478	271	+	.	.
scaffold42922	subtractBed	intrn	165215	165329	.	-	.	Parent=CGI_10008158;
	scaffold42922	TRF	Tandem_Repeat	165215	165329	105	+	.	.
scaffold42922	subtractBed	intrn	166040	166435	.	-	.	Parent=CGI_10008158;
	scaffold42922	TRF	Tandem_Repeat	166040	166435	294	+	.	.
scaffold42924	subtractBed	intrn	28318	28361	.	-	.	Parent=CGI_10008184;
	scaffold42924	TRF	Tandem_Repeat	28318	28361	52	+	.	.
scaffold42924	subtractBed	intrn	29973	30034	.	-	.	Parent=CGI_10008184;
	scaffold42924	TRF	Tandem_Repeat	29973	30034	63	+	.	.
scaffold42924	subtractBed	intrn	37348	37384	.	-	.	Parent=CGI_10008185;
	scaffold42924	TRF	Tandem_Repeat	37348	37384	74	+	.	.
scaffold42924	subtractBed	intrn	39629	40861	.	-	.	Parent=CGI_10008185;
	scaffold42924	WUBlastX	LINE_L1-Tx1	39629	40861	647	-	.	.
scaffold42924	subtractBed	intrn	53122	53157	.	-	.	Parent=CGI_10008185;
	scaffold42924	TRF	Tandem_Repeat	53122	53157	56	+	.	.
scaffold42924	subtractBed	intrn	64464	64533	.	-	.	Parent=CGI_10008185;
	scaffold42924	TRF	Tandem_Repeat	64464	64533	140	+	.	.
scaffold42924	subtractBed	intrn	102633	103548	.	-	.	Parent=CGI_10008189;
	scaffold42924	TRF	Tandem_Repeat	102633	103548	1153	+	.	.
scaffold42924	subtractBed	intrn	105301	105370	.	-	.	Parent=CGI_10008189;
	scaffold42924	TRF	Tandem_Repeat	105301	105370	88	+	.	.
scaffold42924	subtractBed	intrn	163567	163607	.	-	.	Parent=CGI_10008191;
	scaffold42924	TRF	Tandem_Repeat	163567	163607	73	+	.	.
scaffold42924	subtractBed	intrn	169965	170013	.	-	.	Parent=CGI_10008191;
	scaffold42924	TRF	Tandem_Repeat	169965	170013	89	+	.	.
scaffold42924	subtractBed	intrn	170563	170619	.	-	.	Parent=CGI_10008191;
	scaffold42924	TRF	Tandem_Repeat	170563	170619	53	+	.	.
scaffold42924	subtractBed	intrn	171030	171062	.	-	.	Parent=CGI_10008191;
	scaffold42924	TRF	Tandem_Repeat	171030	171062	66	+	.	.
scaffold42930	subtractBed	intrn	27906	27985	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	27906	27985	151	+	.	.
scaffold42930	subtractBed	intrn	31133	31189	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	31133	31189	107	+	.	.
scaffold42930	subtractBed	intrn	31133	31183	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	31133	31183	66	+	.	.
scaffold42930	subtractBed	intrn	36305	36580	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	36305	36580	516	+	.	.
scaffold42930	subtractBed	intrn	36558	36668	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	36558	36671	228	+	.	.
scaffold42930	subtractBed	intrn	42590	43275	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	42590	43275	958	+	.	.
scaffold42930	subtractBed	intrn	43642	43830	.	-	.	Parent=CGI_10008123;
	scaffold42930	TRF	Tandem_Repeat	43642	43830	117	+	.	.
scaffold42930	subtractBed	intrn	98062	98101	.	+	.	Parent=CGI_10008125;
	scaffold42930	TRF	Tandem_Repeat	98062	98101	80	+	.	.
scaffold42930	subtractBed	intrn	98101	98142	.	+	.	Parent=CGI_10008125;
	scaffold42930	TRF	Tandem_Repeat	98101	98142	84	+	.	.
scaffold42946	subtractBed	intrn	20912	21494	.	+	.	Parent=CGI_10008169;
	scaffold42946	TRF	Tandem_Repeat	20912	21494	402	+	.	.
scaffold42946	subtractBed	intrn	33612	33646	.	+	.	Parent=CGI_10008170;
	scaffold42946	TRF	Tandem_Repeat	33612	33646	61	+	.	.
scaffold42946	subtractBed	intrn	35659	35988	.	+	.	Parent=CGI_10008170;
	scaffold42946	WUBlastX	LINE_L1-Tx1	35659	35988	124	-	.	.
scaffold42946	subtractBed	intrn	35404	36003	.	+	.	Parent=CGI_10008170;
	scaffold42946	WUBlastX	LINE_L1	35404	36003	51	-	.	.
scaffold42946	subtractBed	intrn	35515	35988	.	+	.	Parent=CGI_10008170;
	scaffold42946	WUBlastX	LINE_L1	35515	35988	98	-	.	.
scaffold42946	subtractBed	intrn	53859	53894	.	+	.	Parent=CGI_10008170;
	scaffold42946	TRF	Tandem_Repeat	53859	53894	63	+	.	.
scaffold42946	subtractBed	intrn	116950	117000	.	+	.	Parent=CGI_10008177;
	scaffold42946	TRF	Tandem_Repeat	116950	117000	102	+	.	.
scaffold42946	subtractBed	intrn	119358	119472	.	+	.	Parent=CGI_10008177;
	scaffold42946	TRF	Tandem_Repeat	119358	119472	83	+	.	.
scaffold42946	subtractBed	intrn	192339	192417	.	-	.	Parent=CGI_10008183;
	scaffold42946	TRF	Tandem_Repeat	192339	192417	81	+	.	.
scaffold42946	subtractBed	intrn	192346	192417	.	-	.	Parent=CGI_10008183;
	scaffold42946	TRF	Tandem_Repeat	192346	192417	75	+	.	.
scaffold42948	subtractBed	intrn	3120	3179	.	-	.	Parent=CGI_10008217;
	scaffold42948	TRF	Tandem_Repeat	3120	3179	84	+	.	.
scaffold42948	subtractBed	intrn	14184	14242	.	+	.	Parent=CGI_10008219;
	scaffold42948	TRF	Tandem_Repeat	14184	14242	118	+	.	.
scaffold42948	subtractBed	intrn	26805	26841	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	26805	26841	74	+	.	.
scaffold42948	subtractBed	intrn	28676	28713	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	28676	28713	51	+	.	.
scaffold42948	subtractBed	intrn	31421	31459	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	31421	31459	78	+	.	.
scaffold42948	subtractBed	intrn	33362	33394	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	33362	33394	66	+	.	.
scaffold42948	subtractBed	intrn	33638	33690	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	33638	33690	106	+	.	.
scaffold42948	subtractBed	intrn	34952	35001	.	+	.	Parent=CGI_10008222;
	scaffold42948	TRF	Tandem_Repeat	34952	35001	91	+	.	.
scaffold42948	subtractBed	intrn	35872	37212	.	+	.	Parent=CGI_10008222;
	scaffold42948	WUBlastX	DNA_hAT	35872	37212	387	+	.	.
scaffold42948	subtractBed	intrn	173266	173363	.	+	.	Parent=CGI_10008235;
	scaffold42948	TRF	Tandem_Repeat	173266	173363	196	+	.	.
scaffold42948	subtractBed	intrn	195557	195640	.	+	.	Parent=CGI_10008236;
	scaffold42948	WUBlastX	DNA_TcMar-Marin	195557	195640	48	+	.	.
scaffold42948	subtractBed	intrn	195377	195592	.	+	.	Parent=CGI_10008236;
	scaffold42948	WUBlastX	DNA_TcMar-Marin	195377	195592	51	+	.	.
scaffold42948	subtractBed	intrn	195581	195661	.	+	.	Parent=CGI_10008236;
	scaffold42948	WUBlastX	DNA_TcMar-Marin	195581	195661	27	+	.	.
scaffold42960	subtractBed	intrn	54749	54831	.	-	.	Parent=CGI_10008239;
	scaffold42960	TRF	Tandem_Repeat	54749	54831	125	+	.	.
scaffold42960	subtractBed	intrn	65662	65809	.	+	.	Parent=CGI_10008240;
	scaffold42960	TRF	Tandem_Repeat	65662	65809	156	+	.	.
scaffold42960	subtractBed	intrn	148047	148075	.	-	.	Parent=CGI_10008242;
	scaffold42960	TRF	Tandem_Repeat	148047	148075	58	+	.	.
scaffold42960	subtractBed	intrn	155430	155496	.	-	.	Parent=CGI_10008243;
	scaffold42960	TRF	Tandem_Repeat	155430	155496	134	+	.	.
scaffold42960	subtractBed	intrn	155430	155496	.	+	.	Parent=CGI_10008244;
	scaffold42960	TRF	Tandem_Repeat	155430	155496	134	+	.	.
scaffold42960	subtractBed	intrn	171547	171624	.	-	.	Parent=CGI_10008245;
	scaffold42960	TRF	Tandem_Repeat	171547	171624	138	+	.	.
scaffold42960	subtractBed	intrn	178464	178500	.	-	.	Parent=CGI_10008245;
	scaffold42960	TRF	Tandem_Repeat	178464	178500	74	+	.	.
scaffold42990	subtractBed	intrn	30031	30202	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30031	30202	263	+	.	.
scaffold42990	subtractBed	intrn	30031	30337	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30031	30337	375	+	.	.
scaffold42990	subtractBed	intrn	30207	30337	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30207	30337	165	+	.	.
scaffold42990	subtractBed	intrn	30080	30777	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30080	30777	619	+	.	.
scaffold42990	subtractBed	intrn	30413	30810	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30413	30810	521	+	.	.
scaffold42990	subtractBed	intrn	30412	31028	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30412	31028	677	+	.	.
scaffold42990	subtractBed	intrn	30887	31028	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30887	31028	241	+	.	.
scaffold42990	subtractBed	intrn	30413	31022	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	30413	31022	690	+	.	.
scaffold42990	subtractBed	intrn	31517	31582	.	-	.	Parent=CGI_10008373;
	scaffold42990	TRF	Tandem_Repeat	31517	31582	118	+	.	.
scaffold42990	subtractBed	intrn	49702	49739	.	-	.	Parent=CGI_10008374;
	scaffold42990	TRF	Tandem_Repeat	49702	49739	76	+	.	.
scaffold42990	subtractBed	intrn	69319	69385	.	+	.	Parent=CGI_10008375;
	scaffold42990	TRF	Tandem_Repeat	69319	69385	116	+	.	.
scaffold42990	subtractBed	intrn	80919	81132	.	+	.	Parent=CGI_10008376;
	scaffold42990	TRF	Tandem_Repeat	80919	81132	302	+	.	.
scaffold42990	subtractBed	intrn	81528	81562	.	+	.	Parent=CGI_10008376;
	scaffold42990	TRF	Tandem_Repeat	81528	81562	63	+	.	.
scaffold42990	subtractBed	intrn	81618	81655	.	+	.	Parent=CGI_10008376;
	scaffold42990	TRF	Tandem_Repeat	81618	81655	76	+	.	.
scaffold42990	subtractBed	intrn	83077	83618	.	+	.	Parent=CGI_10008376;
	scaffold42990	TRF	Tandem_Repeat	83077	83618	688	+	.	.
scaffold42990	subtractBed	intrn	83077	83601	.	+	.	Parent=CGI_10008376;
	scaffold42990	TRF	Tandem_Repeat	83077	83601	658	+	.	.
scaffold42990	subtractBed	intrn	86268	86651	.	+	.	Parent=CGI_10008376;
	scaffold42990	WUBlastX	LINE_RTE-X	86268	86651	111	+	.	.
scaffold42990	subtractBed	intrn	86277	86528	.	+	.	Parent=CGI_10008376;
	scaffold42990	WUBlastX	LINE_RTE-X	86277	86528	157	+	.	.
scaffold42990	subtractBed	intrn	123139	123178	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	123139	123178	71	+	.	.
scaffold42990	subtractBed	intrn	126553	126617	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	126553	126617	130	+	.	.
scaffold42990	subtractBed	intrn	126730	126792	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	126730	126792	126	+	.	.
scaffold42990	subtractBed	intrn	135634	135687	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	135634	135687	108	+	.	.
scaffold42990	subtractBed	intrn	136547	136593	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	136547	136593	94	+	.	.
scaffold42990	subtractBed	intrn	136702	136753	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	136702	136753	77	+	.	.
scaffold42990	subtractBed	intrn	141106	141169	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	141106	141169	56	+	.	.
scaffold42990	subtractBed	intrn	141130	141169	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	141130	141169	62	+	.	.
scaffold42990	subtractBed	intrn	141785	141818	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	141785	141818	68	+	.	.
scaffold42990	subtractBed	intrn	142265	142295	.	-	.	Parent=CGI_10008381;
	scaffold42990	TRF	Tandem_Repeat	142265	142295	62	+	.	.
scaffold42990	subtractBed	intrn	151037	151298	.	+	.	Parent=CGI_10008382;
	scaffold42990	TRF	Tandem_Repeat	151037	151298	371	+	.	.
scaffold42990	subtractBed	intrn	151033	151296	.	+	.	Parent=CGI_10008382;
	scaffold42990	TRF	Tandem_Repeat	151033	151296	303	+	.	.
scaffold42990	subtractBed	intrn	152604	152989	.	+	.	Parent=CGI_10008382;
	scaffold42990	TRF	Tandem_Repeat	152604	152989	583	+	.	.
scaffold42990	subtractBed	intrn	152602	152989	.	+	.	Parent=CGI_10008382;
	scaffold42990	TRF	Tandem_Repeat	152602	152989	749	+	.	.
scaffold42990	subtractBed	intrn	187350	187417	.	+	.	Parent=CGI_10008386;
	scaffold42990	TRF	Tandem_Repeat	187350	187417	104	+	.	.
scaffold42990	subtractBed	intrn	188578	188760	.	+	.	Parent=CGI_10008386;
	scaffold42990	WUBlastX	LINE_RTE-X	188578	188760	20	-	.	.
scaffold42990	subtractBed	intrn	188641	188769	.	+	.	Parent=CGI_10008386;
	scaffold42990	WUBlastX	LINE_RTE-X	188641	188769	45	-	.	.
scaffold42990	subtractBed	intrn	188762	188941	.	+	.	Parent=CGI_10008386;
	scaffold42990	WUBlastX	LINE_RTE-X	188762	188941	56	-	.	.
scaffold42990	subtractBed	intrn	191328	191886	.	+	.	Parent=CGI_10008386;
	scaffold42990	TRF	Tandem_Repeat	191328	191886	765	+	.	.
scaffold42990	subtractBed	intrn	191619	191980	.	+	.	Parent=CGI_10008386;
	scaffold42990	TRF	Tandem_Repeat	191619	191986	258	+	.	.
scaffold42990	subtractBed	intrn	192409	192779	.	+	.	Parent=CGI_10008386;
	scaffold42990	TRF	Tandem_Repeat	192409	192779	600	+	.	.
scaffold42990	subtractBed	intrn	201486	201522	.	-	.	Parent=CGI_10008387;
	scaffold42990	TRF	Tandem_Repeat	201486	201522	74	+	.	.
scaffold42990	subtractBed	intrn	205124	205175	.	-	.	Parent=CGI_10008387;
	scaffold42990	TRF	Tandem_Repeat	205124	205175	104	+	.	.
scaffold42994	subtractBed	intrn	5510	5569	.	+	.	Parent=CGI_10008312;
	scaffold42994	WUBlastX	LINE_RTE-BovB	5336	5569	64	+	.	.
scaffold42994	subtractBed	intrn	5510	5566	.	+	.	Parent=CGI_10008312;
	scaffold42994	WUBlastX	LINE_RTE-BovB	5249	5566	44	+	.	.
scaffold42994	subtractBed	intrn	5510	5572	.	+	.	Parent=CGI_10008312;
	scaffold42994	WUBlastX	LINE_RTE-BovB	5405	5572	69	+	.	.
scaffold42994	subtractBed	intrn	20435	20452	.	+	.	Parent=CGI_10008314;
	scaffold42994	WUBlastX	DNA_hAT	20435	21175	157	+	.	.
scaffold42994	subtractBed	intrn	46803	46828	.	-	.	Parent=CGI_10008315;
	scaffold42994	TRF	Tandem_Repeat	46803	46828	52	+	.	.
scaffold42994	subtractBed	intrn	69570	69619	.	-	.	Parent=CGI_10008316;
	scaffold42994	TRF	Tandem_Repeat	69570	69619	91	+	.	.
scaffold42994	subtractBed	intrn	95870	96369	.	+	.	Parent=CGI_10008319;
	scaffold42994	TRF	Tandem_Repeat	95870	96369	334	+	.	.
scaffold42994	subtractBed	intrn	101597	101665	.	+	.	Parent=CGI_10008319;
	scaffold42994	TRF	Tandem_Repeat	101597	101665	75	+	.	.
scaffold42994	subtractBed	intrn	101597	101665	.	+	.	Parent=CGI_10008319;
	scaffold42994	TRF	Tandem_Repeat	101597	101665	75	+	.	.
scaffold42994	subtractBed	intrn	101597	101665	.	+	.	Parent=CGI_10008319;
	scaffold42994	TRF	Tandem_Repeat	101597	101665	75	+	.	.
scaffold42994	subtractBed	intrn	112871	112926	.	+	.	Parent=CGI_10008321;
	scaffold42994	TRF	Tandem_Repeat	112871	112926	53	+	.	.
scaffold43	subtractBed	intrn	66053	66105	.	+	.	Parent=CGI_10021340;
	scaffold43	TRF	Tandem_Repeat	66053	66105	106	+	.	.
scaffold43	subtractBed	intrn	131635	131670	.	-	.	Parent=CGI_10021341;
	scaffold43	TRF	Tandem_Repeat	131635	131670	54	+	.	.
scaffold43	subtractBed	intrn	183285	183589	.	-	.	Parent=CGI_10021344;
	scaffold43	TRF	Tandem_Repeat	183285	183589	305	+	.	.
scaffold43	subtractBed	intrn	186432	187054	.	-	.	Parent=CGI_10021344;
	scaffold43	TRF	Tandem_Repeat	186432	187054	738	+	.	.
scaffold43	subtractBed	intrn	186432	187047	.	-	.	Parent=CGI_10021344;
	scaffold43	TRF	Tandem_Repeat	186432	187047	846	+	.	.
scaffold43	subtractBed	intrn	188727	189265	.	-	.	Parent=CGI_10021344;
	scaffold43	TRF	Tandem_Repeat	188727	189265	711	+	.	.
scaffold43	subtractBed	intrn	221275	221327	.	+	.	Parent=CGI_10021347;
	scaffold43	TRF	Tandem_Repeat	221275	221327	106	+	.	.
scaffold43	subtractBed	intrn	243454	243515	.	-	.	Parent=CGI_10021348;
	scaffold43	TRF	Tandem_Repeat	243454	243515	81	+	.	.
scaffold43	subtractBed	intrn	261989	262027	.	+	.	Parent=CGI_10021350;
	scaffold43	TRF	Tandem_Repeat	261989	262027	53	+	.	.
scaffold43	subtractBed	intrn	265389	265415	.	+	.	Parent=CGI_10021350;
	scaffold43	TRF	Tandem_Repeat	265389	265415	54	+	.	.
scaffold43	subtractBed	intrn	265467	265513	.	+	.	Parent=CGI_10021350;
	scaffold43	TRF	Tandem_Repeat	265467	265513	87	+	.	.
scaffold43	subtractBed	intrn	266621	266690	.	+	.	Parent=CGI_10021350;
	scaffold43	TRF	Tandem_Repeat	266621	266690	122	+	.	.
scaffold43	subtractBed	intrn	352691	352720	.	-	.	Parent=CGI_10021353;
	scaffold43	TRF	Tandem_Repeat	352691	352720	51	+	.	.
scaffold43	subtractBed	intrn	353048	353103	.	-	.	Parent=CGI_10021353;
	scaffold43	TRF	Tandem_Repeat	353048	353103	85	+	.	.
scaffold43	subtractBed	intrn	353431	353504	.	-	.	Parent=CGI_10021353;
	scaffold43	TRF	Tandem_Repeat	353431	353504	130	+	.	.
scaffold43	subtractBed	intrn	356652	356691	.	-	.	Parent=CGI_10021353;
	scaffold43	TRF	Tandem_Repeat	356652	356691	71	+	.	.
scaffold43	subtractBed	intrn	372991	373090	.	-	.	Parent=CGI_10021354;
	scaffold43	TRF	Tandem_Repeat	372991	373090	191	+	.	.
scaffold43	subtractBed	intrn	374393	374492	.	-	.	Parent=CGI_10021354;
	scaffold43	TRF	Tandem_Repeat	374393	374492	191	+	.	.
scaffold43	subtractBed	intrn	377165	377209	.	-	.	Parent=CGI_10021354;
	scaffold43	TRF	Tandem_Repeat	377165	377209	65	+	.	.
scaffold43	subtractBed	intrn	378907	379028	.	-	.	Parent=CGI_10021354;
	scaffold43	WUBlastX	LTR_Gypsy	378907	379185	32	+	.	.
scaffold43	subtractBed	intrn	386997	387087	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	386997	387087	137	+	.	.
scaffold43	subtractBed	intrn	387053	387142	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	387053	387142	99	+	.	.
scaffold43	subtractBed	intrn	388595	388701	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	388595	388701	133	+	.	.
scaffold43	subtractBed	intrn	390173	390405	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	390173	390405	217	+	.	.
scaffold43	subtractBed	intrn	390173	390405	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	390173	390405	202	+	.	.
scaffold43	subtractBed	intrn	390151	390364	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	390151	390364	105	+	.	.
scaffold43	subtractBed	intrn	396033	396072	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	396033	396072	80	+	.	.
scaffold43	subtractBed	intrn	399760	399948	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	399760	399948	78	+	.	.
scaffold43	subtractBed	intrn	393741	394193	.	-	.	Parent=CGI_10021355;
	scaffold43	WUBlastX	LINE_RTE-X	393741	394193	173	-	.	.
scaffold43	subtractBed	intrn	393756	394301	.	-	.	Parent=CGI_10021355;
	scaffold43	WUBlastX	LINE_RTE-X	393756	394301	173	-	.	.
scaffold43	subtractBed	intrn	405883	405922	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	405883	405922	71	+	.	.
scaffold43	subtractBed	intrn	412639	413640	.	-	.	Parent=CGI_10021355;
	scaffold43	WUBlastX	DNA_TcMar-Tc1	412639	413640	439	+	.	.
scaffold43	subtractBed	intrn	408804	409633	.	-	.	Parent=CGI_10021355;
	scaffold43	TRF	Tandem_Repeat	408804	409633	781	+	.	.
scaffold43	subtractBed	intrn	547638	547715	.	+	.	Parent=CGI_10021359;
	scaffold43	TRF	Tandem_Repeat	547638	547715	81	+	.	.
scaffold43	subtractBed	intrn	551554	551669	.	-	.	Parent=CGI_10021360;
	scaffold43	TRF	Tandem_Repeat	551554	551669	196	+	.	.
scaffold43	subtractBed	intrn	552184	552299	.	-	.	Parent=CGI_10021360;
	scaffold43	TRF	Tandem_Repeat	552184	552299	196	+	.	.
scaffold43	subtractBed	intrn	553825	553884	.	-	.	Parent=CGI_10021360;
	scaffold43	TRF	Tandem_Repeat	553825	553884	120	+	.	.
scaffold43	subtractBed	intrn	570172	570201	.	-	.	Parent=CGI_10021361;
	scaffold43	TRF	Tandem_Repeat	570172	570201	60	+	.	.
scaffold43	subtractBed	intrn	572988	573041	.	-	.	Parent=CGI_10021361;
	scaffold43	TRF	Tandem_Repeat	572988	573041	108	+	.	.
scaffold43	subtractBed	intrn	574597	574812	.	-	.	Parent=CGI_10021361;
	scaffold43	WUBlastX	LINE_RTE-X	574597	574812	128	+	.	.
scaffold43	subtractBed	intrn	574468	574809	.	-	.	Parent=CGI_10021361;
	scaffold43	WUBlastX	LINE_L1	574468	574809	74	+	.	.
scaffold43	subtractBed	intrn	574549	574812	.	-	.	Parent=CGI_10021361;
	scaffold43	WUBlastX	LINE_RTE-X	574549	574812	85	+	.	.
scaffold43	subtractBed	intrn	577641	577677	.	-	.	Parent=CGI_10021361;
	scaffold43	TRF	Tandem_Repeat	577641	577677	65	+	.	.
scaffold43	subtractBed	intrn	607631	607833	.	-	.	Parent=CGI_10021364;
	scaffold43	TRF	Tandem_Repeat	607631	607833	298	+	.	.
scaffold43	subtractBed	intrn	649549	649596	.	-	.	Parent=CGI_10021365;
	scaffold43	TRF	Tandem_Repeat	649549	649596	96	+	.	.
scaffold43	subtractBed	intrn	652890	652978	.	-	.	Parent=CGI_10021365;
	scaffold43	TRF	Tandem_Repeat	652890	652978	79	+	.	.
scaffold43	subtractBed	intrn	652891	652978	.	-	.	Parent=CGI_10021365;
	scaffold43	TRF	Tandem_Repeat	652891	652978	95	+	.	.
scaffold43008	subtractBed	intrn	4664	4703	.	+	.	Parent=CGI_10008457;
	scaffold43008	TRF	Tandem_Repeat	4664	4703	53	+	.	.
scaffold43008	subtractBed	intrn	4665	4707	.	+	.	Parent=CGI_10008457;
	scaffold43008	TRF	Tandem_Repeat	4665	4707	59	+	.	.
scaffold43008	subtractBed	intrn	4734	5529	.	+	.	Parent=CGI_10008457;
	scaffold43008	TRF	Tandem_Repeat	4734	5529	1084	+	.	.
scaffold43008	subtractBed	intrn	14755	14810	.	+	.	Parent=CGI_10008457;
	scaffold43008	TRF	Tandem_Repeat	14755	14810	105	+	.	.
scaffold43008	subtractBed	intrn	4122	4568	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	4122	4568	48	+	.	.
scaffold43008	subtractBed	intrn	3650	3841	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	3650	3841	59	+	.	.
scaffold43008	subtractBed	intrn	4122	4418	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	4122	4418	84	+	.	.
scaffold43008	subtractBed	intrn	11610	12017	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	DNA_Harbinger	11610	12017	183	-	.	.
scaffold43008	subtractBed	intrn	2896	3642	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	2896	3642	148	+	.	.
scaffold43008	subtractBed	intrn	2603	2764	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_L1	2603	2764	42	+	.	.
scaffold43008	subtractBed	intrn	2579	2701	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_L2	2579	2701	30	+	.	.
scaffold43008	subtractBed	intrn	2462	2701	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	2462	2701	28	+	.	.
scaffold43008	subtractBed	intrn	10969	11262	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	DNA_Harbinger	10969	11262	86	+	.	.
scaffold43008	subtractBed	intrn	2760	2891	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	2760	2891	78	+	.	.
scaffold43008	subtractBed	intrn	2896	3327	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	2896	3327	197	+	.	.
scaffold43008	subtractBed	intrn	3315	4439	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	3315	4439	55	+	.	.
scaffold43008	subtractBed	intrn	2736	2888	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_L2	2736	2888	44	+	.	.
scaffold43008	subtractBed	intrn	4122	4487	.	+	.	Parent=CGI_10008457;
	scaffold43008	WUBlastX	LINE_RTE-X	4122	4487	68	+	.	.
scaffold43008	subtractBed	intrn	20891	21109	.	-	.	Parent=CGI_10008458;
	scaffold43008	WUBlastX	LINE_Jockey	20891	21109	52	-	.	.
scaffold43008	subtractBed	intrn	33294	33351	.	-	.	Parent=CGI_10008458;
	scaffold43008	TRF	Tandem_Repeat	33294	33351	73	+	.	.
scaffold43008	subtractBed	intrn	33463	33588	.	-	.	Parent=CGI_10008458;
	scaffold43008	WUBlastX	LTR_Gypsy	33463	33588	22	-	.	.
scaffold43008	subtractBed	intrn	32769	33134	.	-	.	Parent=CGI_10008458;
	scaffold43008	WUBlastX	LTR_Gypsy	32769	33134	72	-	.	.
scaffold43008	subtractBed	intrn	29007	33062	.	-	.	Parent=CGI_10008458;
	scaffold43008	WUBlastX	LTR_Gypsy	29007	33062	2124	-	.	.
scaffold43008	subtractBed	intrn	51033	51052	.	-	.	Parent=CGI_10008460;
	scaffold43008	WUBlastX	DNA_Sola	50828	51052	52	-	.	.
scaffold43008	subtractBed	intrn	56168	56299	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	56168	56299	25	-	.	.
scaffold43008	subtractBed	intrn	54820	55011	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	54820	55011	86	+	.	.
scaffold43008	subtractBed	intrn	55418	55597	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	55418	55597	63	-	.	.
scaffold43008	subtractBed	intrn	55669	55911	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	55669	55911	61	-	.	.
scaffold43008	subtractBed	intrn	56103	56174	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	56103	56174	37	-	.	.
scaffold43008	subtractBed	intrn	56195	56305	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	56195	56305	72	-	.	.
scaffold43008	subtractBed	intrn	56498	57094	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	56498	57094	136	-	.	.
scaffold43008	subtractBed	intrn	54859	55020	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	54859	55020	89	+	.	.
scaffold43008	subtractBed	intrn	56501	56917	.	+	.	Parent=CGI_10008461;
	scaffold43008	WUBlastX	DNA_Kolobok	56501	56917	150	-	.	.
scaffold43008	subtractBed	intrn	84633	84791	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1	84633	84791	67	-	.	.
scaffold43008	subtractBed	intrn	84603	84791	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	84603	84791	54	-	.	.
scaffold43008	subtractBed	intrn	84721	85107	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	84721	85107	67	-	.	.
scaffold43008	subtractBed	intrn	85380	86333	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	85380	86333	193	-	.	.
scaffold43008	subtractBed	intrn	86135	86671	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	86135	86671	77	-	.	.
scaffold43008	subtractBed	intrn	84262	84363	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	84262	84363	27	-	.	.
scaffold43008	subtractBed	intrn	84205	84414	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	84205	84414	22	-	.	.
scaffold43008	subtractBed	intrn	85383	86114	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	85383	86114	249	-	.	.
scaffold43008	subtractBed	intrn	86135	86500	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	86135	86500	99	-	.	.
scaffold43008	subtractBed	intrn	85037	85351	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1	85037	85351	138	-	.	.
scaffold43008	subtractBed	intrn	85100	85351	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	85100	85351	176	-	.	.
scaffold43008	subtractBed	intrn	84238	84402	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1-Tx1	84238	84402	24	-	.	.
scaffold43008	subtractBed	intrn	84265	84522	.	-	.	Parent=CGI_10008462;
	scaffold43008	WUBlastX	LINE_L1	84265	84522	24	-	.	.
scaffold43008	subtractBed	intrn	166788	166837	.	-	.	Parent=CGI_10008464;
	scaffold43008	TRF	Tandem_Repeat	166788	166837	82	+	.	.
scaffold43024	subtractBed	intrn	92771	93677	.	+	.	Parent=CGI_10008556;
	scaffold43024	TRF	Tandem_Repeat	92771	93677	1485	+	.	.
scaffold43024	subtractBed	intrn	132840	133245	.	+	.	Parent=CGI_10008557;
	scaffold43024	TRF	Tandem_Repeat	132840	133245	374	+	.	.
scaffold43024	subtractBed	intrn	133028	133337	.	+	.	Parent=CGI_10008557;
	scaffold43024	TRF	Tandem_Repeat	133028	133337	250	+	.	.
scaffold43024	subtractBed	intrn	133668	133717	.	+	.	Parent=CGI_10008557;
	scaffold43024	TRF	Tandem_Repeat	133668	133717	100	+	.	.
scaffold43024	subtractBed	intrn	134460	134507	.	+	.	Parent=CGI_10008557;
	scaffold43024	TRF	Tandem_Repeat	134460	134507	96	+	.	.
scaffold43024	subtractBed	intrn	184383	184458	.	+	.	Parent=CGI_10008561;
	scaffold43024	TRF	Tandem_Repeat	184383	184458	152	+	.	.
scaffold43024	subtractBed	intrn	190183	190232	.	-	.	Parent=CGI_10008562;
	scaffold43024	TRF	Tandem_Repeat	190183	190232	100	+	.	.
scaffold43026	subtractBed	intrn	143672	143694	.	+	.	Parent=CGI_10008550;
	scaffold43026	WUBlastX	LINE_RTE-BovB	143672	143926	58	-	.	.
scaffold43026	subtractBed	intrn	143678	143694	.	+	.	Parent=CGI_10008550;
	scaffold43026	WUBlastX	LINE_RTE-BovB	143678	143830	94	-	.	.
scaffold43026	subtractBed	intrn	143736	143926	.	+	.	Parent=CGI_10008550;
	scaffold43026	WUBlastX	LINE_RTE-BovB	143672	143926	58	-	.	.
scaffold43026	subtractBed	intrn	143736	143830	.	+	.	Parent=CGI_10008550;
	scaffold43026	WUBlastX	LINE_RTE-BovB	143678	143830	94	-	.	.
scaffold43028	subtractBed	intrn	3547	3599	.	-	.	Parent=CGI_10008500;
	scaffold43028	TRF	Tandem_Repeat	3547	3599	106	+	.	.
scaffold43028	subtractBed	intrn	17106	17261	.	+	.	Parent=CGI_10008502;
	scaffold43028	WUBlastX	LINE_RTE-BovB	17106	17261	37	-	.	.
scaffold43028	subtractBed	intrn	112715	112768	.	+	.	Parent=CGI_10008507;
	scaffold43028	TRF	Tandem_Repeat	112715	112768	108	+	.	.
scaffold43028	subtractBed	intrn	114515	115446	.	+	.	Parent=CGI_10008507;
	scaffold43028	TRF	Tandem_Repeat	114515	115446	1291	+	.	.
scaffold43028	subtractBed	intrn	126010	126081	.	+	.	Parent=CGI_10008507;
	scaffold43028	TRF	Tandem_Repeat	126010	126081	137	+	.	.
scaffold43028	subtractBed	intrn	128445	129549	.	+	.	Parent=CGI_10008507;
	scaffold43028	TRF	Tandem_Repeat	128424	129549	1252	+	.	.
scaffold43028	subtractBed	intrn	149921	149973	.	-	.	Parent=CGI_10008510;
	scaffold43028	TRF	Tandem_Repeat	149921	149973	106	+	.	.
scaffold43036	subtractBed	intrn	26859	26872	.	-	.	Parent=CGI_10008493;
	scaffold43036	WUBlastX	LTR_Pao	26859	26960	115	-	.	.
scaffold43036	subtractBed	intrn	27045	27049	.	-	.	Parent=CGI_10008493;
	scaffold43036	WUBlastX	LTR_Pao	27045	27152	123	-	.	.
scaffold43036	subtractBed	intrn	27048	27049	.	-	.	Parent=CGI_10008493;
	scaffold43036	WUBlastX	LTR_Pao	27048	27182	104	-	.	.
scaffold43036	subtractBed	intrn	26960	26960	.	-	.	Parent=CGI_10008493;
	scaffold43036	WUBlastX	LTR_Pao	26859	26960	115	-	.	.
scaffold43036	subtractBed	intrn	78666	78724	.	+	.	Parent=CGI_10008495;
	scaffold43036	TRF	Tandem_Repeat	78666	78724	118	+	.	.
scaffold43036	subtractBed	intrn	90060	90086	.	+	.	Parent=CGI_10008495;
	scaffold43036	TRF	Tandem_Repeat	90060	90086	54	+	.	.
scaffold43036	subtractBed	intrn	97955	98022	.	+	.	Parent=CGI_10008496;
	scaffold43036	TRF	Tandem_Repeat	97955	98022	136	+	.	.
scaffold43036	subtractBed	intrn	98059	98086	.	+	.	Parent=CGI_10008496;
	scaffold43036	TRF	Tandem_Repeat	98059	98086	56	+	.	.
scaffold43036	subtractBed	intrn	105237	105307	.	+	.	Parent=CGI_10008496;
	scaffold43036	TRF	Tandem_Repeat	105237	105307	52	+	.	.
scaffold43036	subtractBed	intrn	126200	126225	.	-	.	Parent=CGI_10008497;
	scaffold43036	TRF	Tandem_Repeat	126200	126225	52	+	.	.
scaffold43036	subtractBed	intrn	149188	149373	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-hAT5	149188	149373	38	+	.	.
scaffold43036	subtractBed	intrn	150595	150807	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-Blackja	150595	150807	106	+	.	.
scaffold43036	subtractBed	intrn	150806	151774	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-Blackja	150806	151774	322	+	.	.
scaffold43036	subtractBed	intrn	149711	149761	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-Blackja	149711	149761	25	+	.	.
scaffold43036	subtractBed	intrn	151848	152153	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-Blackja	151848	152153	73	+	.	.
scaffold43036	subtractBed	intrn	151466	151843	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	DNA_hAT-Blackja	151466	151843	69	+	.	.
scaffold43036	subtractBed	intrn	159421	159462	.	+	.	Parent=CGI_10008498;
	scaffold43036	TRF	Tandem_Repeat	159421	159462	50	+	.	.
scaffold43036	subtractBed	intrn	160749	161567	.	+	.	Parent=CGI_10008498;
	scaffold43036	TRF	Tandem_Repeat	160749	161567	980	+	.	.
scaffold43036	subtractBed	intrn	167431	167512	.	+	.	Parent=CGI_10008498;
	scaffold43036	TRF	Tandem_Repeat	167431	167512	155	+	.	.
scaffold43036	subtractBed	intrn	171647	171707	.	+	.	Parent=CGI_10008498;
	scaffold43036	WUBlastX	LINE_CR1-L2	171647	171790	45	+	.	.
scaffold43038	subtractBed	intrn	21907	21945	.	+	.	Parent=CGI_10008439;
	scaffold43038	TRF	Tandem_Repeat	21907	21945	78	+	.	.
scaffold43038	subtractBed	intrn	32407	32456	.	+	.	Parent=CGI_10008440;
	scaffold43038	TRF	Tandem_Repeat	32407	32456	73	+	.	.
scaffold43038	subtractBed	intrn	39586	40992	.	+	.	Parent=CGI_10008440;
	scaffold43038	TRF	Tandem_Repeat	39586	40992	1475	+	.	.
scaffold43038	subtractBed	intrn	39586	40966	.	+	.	Parent=CGI_10008440;
	scaffold43038	TRF	Tandem_Repeat	39586	40966	1685	+	.	.
scaffold43038	subtractBed	intrn	48354	48397	.	+	.	Parent=CGI_10008440;
	scaffold43038	TRF	Tandem_Repeat	48354	48397	88	+	.	.
scaffold43038	subtractBed	intrn	89278	89334	.	-	.	Parent=CGI_10008443;
	scaffold43038	TRF	Tandem_Repeat	89278	89334	105	+	.	.
scaffold43038	subtractBed	intrn	96721	96762	.	-	.	Parent=CGI_10008443;
	scaffold43038	TRF	Tandem_Repeat	96721	96762	57	+	.	.
scaffold43038	subtractBed	intrn	97351	98347	.	-	.	Parent=CGI_10008443;
	scaffold43038	WUBlastX	LINE_RTE-X	97316	98347	77	-	.	.
scaffold43038	subtractBed	intrn	97661	98347	.	-	.	Parent=CGI_10008443;
	scaffold43038	WUBlastX	LINE_RTE-X	97661	98347	109	-	.	.
scaffold43038	subtractBed	intrn	96721	96762	.	+	.	Parent=CGI_10008444;
	scaffold43038	TRF	Tandem_Repeat	96721	96762	57	+	.	.
scaffold43038	subtractBed	intrn	97351	98347	.	+	.	Parent=CGI_10008444;
	scaffold43038	WUBlastX	LINE_RTE-X	97316	98347	77	-	.	.
scaffold43038	subtractBed	intrn	97661	98347	.	+	.	Parent=CGI_10008444;
	scaffold43038	WUBlastX	LINE_RTE-X	97661	98347	109	-	.	.
scaffold43038	subtractBed	intrn	123837	123884	.	+	.	Parent=CGI_10008447;
	scaffold43038	TRF	Tandem_Repeat	123837	123884	78	+	.	.
scaffold43038	subtractBed	intrn	131066	131691	.	+	.	Parent=CGI_10008447;
	scaffold43038	TRF	Tandem_Repeat	131066	131691	813	+	.	.
scaffold43038	subtractBed	intrn	165033	165259	.	+	.	Parent=CGI_10008448;
	scaffold43038	TRF	Tandem_Repeat	165033	165259	167	+	.	.
scaffold43038	subtractBed	intrn	165024	165255	.	+	.	Parent=CGI_10008448;
	scaffold43038	TRF	Tandem_Repeat	165024	165255	177	+	.	.
scaffold43038	subtractBed	intrn	165670	165697	.	+	.	Parent=CGI_10008448;
	scaffold43038	TRF	Tandem_Repeat	165670	165697	56	+	.	.
scaffold43054	subtractBed	intrn	48007	48060	.	+	.	Parent=CGI_10008595;
	scaffold43054	TRF	Tandem_Repeat	48007	48060	69	+	.	.
scaffold43054	subtractBed	intrn	64221	64290	.	-	.	Parent=CGI_10008596;
	scaffold43054	TRF	Tandem_Repeat	64221	64290	140	+	.	.
scaffold43054	subtractBed	intrn	64598	64657	.	-	.	Parent=CGI_10008596;
	scaffold43054	TRF	Tandem_Repeat	64598	64657	113	+	.	.
scaffold43054	subtractBed	intrn	70949	71257	.	+	.	Parent=CGI_10008597;
	scaffold43054	WUBlastX	LINE_RTE-X	70949	71257	89	-	.	.
scaffold43054	subtractBed	intrn	70889	71248	.	+	.	Parent=CGI_10008597;
	scaffold43054	WUBlastX	LINE_RTE-X	70889	71248	65	-	.	.
scaffold43054	subtractBed	intrn	70823	71251	.	+	.	Parent=CGI_10008597;
	scaffold43054	WUBlastX	LINE_RTE-X	70823	71251	40	-	.	.
scaffold43054	subtractBed	intrn	123218	123278	.	-	.	Parent=CGI_10008599;
	scaffold43054	TRF	Tandem_Repeat	123218	123278	122	+	.	.
scaffold43054	subtractBed	intrn	125092	125189	.	-	.	Parent=CGI_10008599;
	scaffold43054	TRF	Tandem_Repeat	125092	125189	105	+	.	.
scaffold43054	subtractBed	intrn	126709	127079	.	-	.	Parent=CGI_10008599;
	scaffold43054	TRF	Tandem_Repeat	126709	127079	627	+	.	.
scaffold43064	subtractBed	intrn	4069	4115	.	+	.	Parent=CGI_10008625;
	scaffold43064	TRF	Tandem_Repeat	4069	4115	94	+	.	.
scaffold43064	subtractBed	intrn	19461	20441	.	+	.	Parent=CGI_10008625;
	scaffold43064	WUBlastX	LINE_RTE-X	19461	20441	440	-	.	.
scaffold43064	subtractBed	intrn	21283	21540	.	+	.	Parent=CGI_10008625;
	scaffold43064	WUBlastX	LINE_RTE-X	21283	21540	35	-	.	.
scaffold43064	subtractBed	intrn	21277	21408	.	+	.	Parent=CGI_10008625;
	scaffold43064	WUBlastX	LINE_RTE-X	21277	21408	55	-	.	.
scaffold43064	subtractBed	intrn	21274	21432	.	+	.	Parent=CGI_10008625;
	scaffold43064	WUBlastX	LINE_RTE-BovB	21274	21432	42	-	.	.
scaffold43064	subtractBed	intrn	26247	26840	.	-	.	Parent=CGI_10008626;
	scaffold43064	TRF	Tandem_Repeat	26247	26840	299	+	.	.
scaffold43064	subtractBed	intrn	26606	26840	.	-	.	Parent=CGI_10008626;
	scaffold43064	TRF	Tandem_Repeat	26606	26840	163	+	.	.
scaffold43064	subtractBed	intrn	26771	26841	.	-	.	Parent=CGI_10008626;
	scaffold43064	TRF	Tandem_Repeat	26771	26841	79	+	.	.
scaffold43064	subtractBed	intrn	54803	54856	.	-	.	Parent=CGI_10008627;
	scaffold43064	TRF	Tandem_Repeat	54803	54856	108	+	.	.
scaffold43064	subtractBed	intrn	51393	51764	.	-	.	Parent=CGI_10008627;
	scaffold43064	WUBlastX	DNA_Harbinger	51393	51764	98	-	.	.
scaffold43064	subtractBed	intrn	53078	53473	.	-	.	Parent=CGI_10008627;
	scaffold43064	WUBlastX	LTR_Gypsy	53078	53473	86	+	.	.
scaffold43064	subtractBed	intrn	86459	86775	.	-	.	Parent=CGI_10008628;
	scaffold43064	TRF	Tandem_Repeat	86459	86775	280	+	.	.
scaffold43064	subtractBed	intrn	98284	98336	.	-	.	Parent=CGI_10008628;
	scaffold43064	TRF	Tandem_Repeat	98284	98336	106	+	.	.
scaffold43064	subtractBed	intrn	147725	147804	.	-	.	Parent=CGI_10008631;
	scaffold43064	TRF	Tandem_Repeat	147725	147804	65	+	.	.
scaffold43064	subtractBed	intrn	147722	147791	.	-	.	Parent=CGI_10008631;
	scaffold43064	TRF	Tandem_Repeat	147722	147791	54	+	.	.
scaffold43064	subtractBed	intrn	154173	154210	.	+	.	Parent=CGI_10008632;
	scaffold43064	TRF	Tandem_Repeat	154173	154210	76	+	.	.
scaffold43064	subtractBed	intrn	167923	168012	.	+	.	Parent=CGI_10008633;
	scaffold43064	TRF	Tandem_Repeat	167923	168012	85	+	.	.
scaffold43064	subtractBed	intrn	167925	168026	.	+	.	Parent=CGI_10008633;
	scaffold43064	TRF	Tandem_Repeat	167925	168026	80	+	.	.
scaffold43064	subtractBed	intrn	169290	169431	.	+	.	Parent=CGI_10008633;
	scaffold43064	TRF	Tandem_Repeat	169290	169431	92	+	.	.
scaffold43064	subtractBed	intrn	167524	167709	.	+	.	Parent=CGI_10008633;
	scaffold43064	WUBlastX	DNA_TcMar-Tc1	167524	167709	86	-	.	.
scaffold43064	subtractBed	intrn	167509	167784	.	+	.	Parent=CGI_10008633;
	scaffold43064	WUBlastX	DNA_TcMar-Tc1	167509	167784	40	-	.	.
scaffold43064	subtractBed	intrn	180640	180681	.	+	.	Parent=CGI_10008633;
	scaffold43064	TRF	Tandem_Repeat	180640	180681	77	+	.	.
scaffold43064	subtractBed	intrn	184473	184664	.	+	.	Parent=CGI_10008633;
	scaffold43064	WUBlastX	LINE_L1-Tx1	184473	184664	24	+	.	.
scaffold43064	subtractBed	intrn	183814	184188	.	+	.	Parent=CGI_10008633;
	scaffold43064	WUBlastX	LINE_L1-Tx1	183814	184188	76	+	.	.
scaffold43066	subtractBed	intrn	5403	5546	.	-	.	Parent=CGI_10008676;
	scaffold43066	TRF	Tandem_Repeat	5403	5546	100	+	.	.
scaffold43066	subtractBed	intrn	5559	5662	.	-	.	Parent=CGI_10008676;
	scaffold43066	TRF	Tandem_Repeat	5559	5662	120	+	.	.
scaffold43066	subtractBed	intrn	5403	5662	.	-	.	Parent=CGI_10008676;
	scaffold43066	TRF	Tandem_Repeat	5403	5662	161	+	.	.
scaffold43066	subtractBed	intrn	19702	19745	.	-	.	Parent=CGI_10008677;
	scaffold43066	TRF	Tandem_Repeat	19702	19745	56	+	.	.
scaffold43066	subtractBed	intrn	19921	19971	.	-	.	Parent=CGI_10008677;
	scaffold43066	TRF	Tandem_Repeat	19921	19971	102	+	.	.
scaffold43066	subtractBed	intrn	21472	21517	.	-	.	Parent=CGI_10008677;
	scaffold43066	TRF	Tandem_Repeat	21472	21517	92	+	.	.
scaffold43066	subtractBed	intrn	26399	27087	.	-	.	Parent=CGI_10008678;
	scaffold43066	TRF	Tandem_Repeat	26399	27087	804	+	.	.
scaffold43066	subtractBed	intrn	108423	108449	.	-	.	Parent=CGI_10008679;
	scaffold43066	TRF	Tandem_Repeat	108423	108449	54	+	.	.
scaffold43066	subtractBed	intrn	148200	148225	.	-	.	Parent=CGI_10008681;
	scaffold43066	TRF	Tandem_Repeat	148200	148225	52	+	.	.
scaffold43066	subtractBed	intrn	148509	148535	.	-	.	Parent=CGI_10008681;
	scaffold43066	TRF	Tandem_Repeat	148509	148535	54	+	.	.
scaffold43066	subtractBed	intrn	157208	157242	.	-	.	Parent=CGI_10008681;
	scaffold43066	TRF	Tandem_Repeat	157208	157242	70	+	.	.
scaffold43066	subtractBed	intrn	203439	203753	.	+	.	Parent=CGI_10008684;
	scaffold43066	TRF	Tandem_Repeat	203418	203753	559	+	.	.
scaffold43066	subtractBed	intrn	212757	213220	.	+	.	Parent=CGI_10008684;
	scaffold43066	TRF	Tandem_Repeat	212757	213220	603	+	.	.
scaffold43072	subtractBed	intrn	7139	7199	.	-	.	Parent=CGI_10008695;
	scaffold43072	TRF	Tandem_Repeat	7139	7199	50	+	.	.
scaffold43072	subtractBed	intrn	8503	8537	.	-	.	Parent=CGI_10008695;
	scaffold43072	TRF	Tandem_Repeat	8503	8537	70	+	.	.
scaffold43072	subtractBed	intrn	14326	14530	.	-	.	Parent=CGI_10008695;
	scaffold43072	TRF	Tandem_Repeat	14326	14530	311	+	.	.
scaffold43072	subtractBed	intrn	24474	24506	.	-	.	Parent=CGI_10008697;
	scaffold43072	WUBlastX	LTR_Gypsy	24474	24593	45	-	.	.
scaffold43072	subtractBed	intrn	33347	33391	.	-	.	Parent=CGI_10008697;
	scaffold43072	TRF	Tandem_Repeat	33347	33391	90	+	.	.
scaffold43072	subtractBed	intrn	45966	46005	.	-	.	Parent=CGI_10008697;
	scaffold43072	TRF	Tandem_Repeat	45966	46005	80	+	.	.
scaffold43072	subtractBed	intrn	50307	50365	.	-	.	Parent=CGI_10008697;
	scaffold43072	TRF	Tandem_Repeat	50307	50365	86	+	.	.
scaffold43072	subtractBed	intrn	50959	51013	.	-	.	Parent=CGI_10008697;
	scaffold43072	TRF	Tandem_Repeat	50959	51013	110	+	.	.
scaffold43072	subtractBed	intrn	100826	100980	.	+	.	Parent=CGI_10008698;
	scaffold43072	TRF	Tandem_Repeat	100804	100980	183	+	.	.
scaffold43072	subtractBed	intrn	100826	100980	.	+	.	Parent=CGI_10008698;
	scaffold43072	TRF	Tandem_Repeat	100813	100980	156	+	.	.
scaffold43072	subtractBed	intrn	101432	101960	.	+	.	Parent=CGI_10008698;
	scaffold43072	TRF	Tandem_Repeat	101432	101960	476	+	.	.
scaffold43072	subtractBed	intrn	101432	101960	.	+	.	Parent=CGI_10008698;
	scaffold43072	TRF	Tandem_Repeat	101432	101960	456	+	.	.
scaffold43072	subtractBed	intrn	112632	112985	.	-	.	Parent=CGI_10008700;
	scaffold43072	WUBlastX	LINE_RTE-X	112632	112985	22	-	.	.
scaffold43072	subtractBed	intrn	112752	113013	.	-	.	Parent=CGI_10008700;
	scaffold43072	WUBlastX	LINE_RTE-X	112752	113069	82	-	.	.
scaffold43072	subtractBed	intrn	116004	116042	.	-	.	Parent=CGI_10008700;
	scaffold43072	TRF	Tandem_Repeat	116004	116042	51	+	.	.
scaffold43072	subtractBed	intrn	121113	121199	.	-	.	Parent=CGI_10008700;
	scaffold43072	TRF	Tandem_Repeat	121113	121199	66	+	.	.
scaffold43072	subtractBed	intrn	121306	121490	.	-	.	Parent=CGI_10008700;
	scaffold43072	TRF	Tandem_Repeat	121306	121490	122	+	.	.
scaffold43072	subtractBed	intrn	121505	121652	.	-	.	Parent=CGI_10008700;
	scaffold43072	TRF	Tandem_Repeat	121505	121652	143	+	.	.
scaffold43072	subtractBed	intrn	125158	125218	.	-	.	Parent=CGI_10008700;
	scaffold43072	TRF	Tandem_Repeat	125158	125218	122	+	.	.
scaffold43072	subtractBed	intrn	153331	153382	.	-	.	Parent=CGI_10008703;
	scaffold43072	TRF	Tandem_Repeat	153331	153382	104	+	.	.
scaffold43072	subtractBed	intrn	180079	180162	.	-	.	Parent=CGI_10008704;
	scaffold43072	WUBlastX	LTR_Gypsy	180079	180162	20	-	.	.
scaffold43072	subtractBed	intrn	181590	181639	.	-	.	Parent=CGI_10008704;
	scaffold43072	TRF	Tandem_Repeat	181590	181639	100	+	.	.
scaffold43072	subtractBed	intrn	180079	180162	.	+	.	Parent=CGI_10008705;
	scaffold43072	WUBlastX	LTR_Gypsy	180079	180162	20	-	.	.
scaffold43072	subtractBed	intrn	181590	181639	.	+	.	Parent=CGI_10008705;
	scaffold43072	TRF	Tandem_Repeat	181590	181639	100	+	.	.
scaffold43072	subtractBed	intrn	195567	195833	.	+	.	Parent=CGI_10008707;
	scaffold43072	TRF	Tandem_Repeat	195567	195833	399	+	.	.
scaffold43072	subtractBed	intrn	211515	211675	.	-	.	Parent=CGI_10008709;
	scaffold43072	TRF	Tandem_Repeat	211515	211675	164	+	.	.
scaffold43072	subtractBed	intrn	211704	211811	.	-	.	Parent=CGI_10008709;
	scaffold43072	TRF	Tandem_Repeat	211704	211811	87	+	.	.
scaffold43076	subtractBed	intrn	66682	66685	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	66512	66685	23	+	.	.
scaffold43076	subtractBed	intrn	66682	66685	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	66578	66685	33	+	.	.
scaffold43076	subtractBed	intrn	68281	68505	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_Kolobok-IS4	68281	68505	55	-	.	.
scaffold43076	subtractBed	intrn	68702	68787	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_Kolobok-IS4	68702	68929	38	-	.	.
scaffold43076	subtractBed	intrn	67645	67869	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	67645	67869	109	+	.	.
scaffold43076	subtractBed	intrn	67403	68029	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	67403	68029	63	+	.	.
scaffold43076	subtractBed	intrn	67612	67824	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	67612	67824	79	+	.	.
scaffold43076	subtractBed	intrn	68308	68583	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	68308	68583	40	-	.	.
scaffold43076	subtractBed	intrn	67645	67827	.	+	.	Parent=CGI_10008761;
	scaffold43076	WUBlastX	DNA_IS4EU	67645	67827	124	+	.	.
scaffold43076	subtractBed	intrn	124454	124456	.	+	.	Parent=CGI_10008765;
	scaffold43076	WUBlastX	DNA_IS4EU	124292	124456	56	+	.	.
scaffold43076	subtractBed	intrn	181025	181531	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	RC_Helitron	181025	181531	72	-	.	.
scaffold43076	subtractBed	intrn	188460	189044	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	188460	189044	152	-	.	.
scaffold43076	subtractBed	intrn	188919	189314	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	188919	189314	51	-	.	.
scaffold43076	subtractBed	intrn	189596	189658	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	189596	189658	24	-	.	.
scaffold43076	subtractBed	intrn	187942	188436	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	187942	188436	218	-	.	.
scaffold43076	subtractBed	intrn	188451	188933	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	188451	188933	284	-	.	.
scaffold43076	subtractBed	intrn	187757	187885	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Copia	187757	187885	29	-	.	.
scaffold43076	subtractBed	intrn	187822	188442	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	187822	188442	110	-	.	.
scaffold43076	subtractBed	intrn	188919	189164	.	-	.	Parent=CGI_10008769;
	scaffold43076	WUBlastX	LTR_Gypsy	188919	189164	73	-	.	.
scaffold43076	subtractBed	intrn	188460	189044	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	188460	189044	152	-	.	.
scaffold43076	subtractBed	intrn	188919	189314	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	188919	189314	51	-	.	.
scaffold43076	subtractBed	intrn	189596	189658	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	189596	189658	24	-	.	.
scaffold43076	subtractBed	intrn	187942	188436	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	187942	188436	218	-	.	.
scaffold43076	subtractBed	intrn	188451	188933	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	188451	188933	284	-	.	.
scaffold43076	subtractBed	intrn	187757	187885	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Copia	187757	187885	29	-	.	.
scaffold43076	subtractBed	intrn	187822	188442	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	187822	188442	110	-	.	.
scaffold43076	subtractBed	intrn	188919	189164	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	188919	189164	73	-	.	.
scaffold43076	subtractBed	intrn	195503	195568	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy-Cigr	195503	195568	25	-	.	.
scaffold43076	subtractBed	intrn	195518	195919	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	195518	195919	74	-	.	.
scaffold43076	subtractBed	intrn	195880	196272	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	195880	196272	122	-	.	.
scaffold43076	subtractBed	intrn	198141	198203	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	198141	198203	24	-	.	.
scaffold43076	subtractBed	intrn	195955	196809	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy-Cigr	195955	196809	453	-	.	.
scaffold43076	subtractBed	intrn	196057	196986	.	+	.	Parent=CGI_10008770;
	scaffold43076	WUBlastX	LTR_Gypsy	196057	196986	110	-	.	.
scaffold43076	subtractBed	intrn	204224	204299	.	+	.	Parent=CGI_10008770;
	scaffold43076	TRF	Tandem_Repeat	204224	204299	98	+	.	.
scaffold43076	subtractBed	intrn	204224	204299	.	+	.	Parent=CGI_10008770;
	scaffold43076	TRF	Tandem_Repeat	204224	204299	98	+	.	.
scaffold43084	subtractBed	intrn	2887	3426	.	-	.	Parent=CGI_10008563;
	scaffold43084	WUBlastX	LINE_Penelope	2887	3426	258	-	.	.
scaffold43084	subtractBed	intrn	3387	4136	.	-	.	Parent=CGI_10008563;
	scaffold43084	WUBlastX	LINE_Penelope	3387	4136	497	-	.	.
scaffold43084	subtractBed	intrn	79531	79571	.	+	.	Parent=CGI_10008564;
	scaffold43084	TRF	Tandem_Repeat	79531	79571	82	+	.	.
scaffold43084	subtractBed	intrn	101283	101457	.	+	.	Parent=CGI_10008565;
	scaffold43084	TRF	Tandem_Repeat	101283	101457	187	+	.	.
scaffold43084	subtractBed	intrn	127766	127826	.	+	.	Parent=CGI_10008568;
	scaffold43084	TRF	Tandem_Repeat	127766	127826	122	+	.	.
scaffold43084	subtractBed	intrn	129878	129937	.	+	.	Parent=CGI_10008568;
	scaffold43084	TRF	Tandem_Repeat	129878	129937	75	+	.	.
scaffold43084	subtractBed	intrn	130683	130734	.	+	.	Parent=CGI_10008568;
	scaffold43084	TRF	Tandem_Repeat	130683	130734	50	+	.	.
scaffold43084	subtractBed	intrn	140341	140643	.	+	.	Parent=CGI_10008568;
	scaffold43084	TRF	Tandem_Repeat	140341	140643	561	+	.	.
scaffold43084	subtractBed	intrn	130905	132237	.	+	.	Parent=CGI_10008568;
	scaffold43084	TRF	Tandem_Repeat	130905	132237	1402	+	.	.
scaffold43084	subtractBed	intrn	179038	179093	.	-	.	Parent=CGI_10008570;
	scaffold43084	TRF	Tandem_Repeat	179038	179093	112	+	.	.
scaffold43084	subtractBed	intrn	179551	179606	.	-	.	Parent=CGI_10008570;
	scaffold43084	TRF	Tandem_Repeat	179551	179606	112	+	.	.
scaffold43084	subtractBed	intrn	180064	180098	.	-	.	Parent=CGI_10008570;
	scaffold43084	TRF	Tandem_Repeat	180064	180098	70	+	.	.
scaffold43084	subtractBed	intrn	192165	192458	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	192165	192458	165	+	.	.
scaffold43084	subtractBed	intrn	192188	192386	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	192188	192386	117	+	.	.
scaffold43084	subtractBed	intrn	192265	192324	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	192265	192324	61	+	.	.
scaffold43084	subtractBed	intrn	192367	192431	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	192367	192431	53	+	.	.
scaffold43084	subtractBed	intrn	192487	192548	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	192487	192548	79	+	.	.
scaffold43084	subtractBed	intrn	193861	194186	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	193861	194186	571	+	.	.
scaffold43084	subtractBed	intrn	196319	196344	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	196319	196344	52	+	.	.
scaffold43084	subtractBed	intrn	199304	199342	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	199304	199342	78	+	.	.
scaffold43084	subtractBed	intrn	199340	199371	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	199340	199371	64	+	.	.
scaffold43084	subtractBed	intrn	200126	200666	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	200126	200666	665	+	.	.
scaffold43084	subtractBed	intrn	200126	200666	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	200126	200666	665	+	.	.
scaffold43084	subtractBed	intrn	203407	203464	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	203407	203464	82	+	.	.
scaffold43084	subtractBed	intrn	205599	205785	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	205599	205785	203	+	.	.
scaffold43084	subtractBed	intrn	205784	205971	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	205784	205971	214	+	.	.
scaffold43084	subtractBed	intrn	205784	205920	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	205784	205920	112	+	.	.
scaffold43084	subtractBed	intrn	205862	205973	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	205862	205973	109	+	.	.
scaffold43084	subtractBed	intrn	206058	206144	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	206058	206144	113	+	.	.
scaffold43084	subtractBed	intrn	206410	206463	.	-	.	Parent=CGI_10008571;
	scaffold43084	TRF	Tandem_Repeat	206410	206463	90	+	.	.
scaffold43108	subtractBed	intrn	3329	3368	.	+	.	Parent=CGI_10008833;
	scaffold43108	TRF	Tandem_Repeat	3329	3368	80	+	.	.
scaffold43108	subtractBed	intrn	3850	3894	.	+	.	Parent=CGI_10008833;
	scaffold43108	TRF	Tandem_Repeat	3850	3894	90	+	.	.
scaffold43108	subtractBed	intrn	4138	4170	.	+	.	Parent=CGI_10008833;
	scaffold43108	TRF	Tandem_Repeat	4138	4170	66	+	.	.
scaffold43108	subtractBed	intrn	4240	4276	.	+	.	Parent=CGI_10008833;
	scaffold43108	TRF	Tandem_Repeat	4240	4276	74	+	.	.
scaffold43108	subtractBed	intrn	11051	11141	.	+	.	Parent=CGI_10008834;
	scaffold43108	TRF	Tandem_Repeat	11051	11141	175	+	.	.
scaffold43108	subtractBed	intrn	11338	11375	.	+	.	Parent=CGI_10008834;
	scaffold43108	TRF	Tandem_Repeat	11338	11375	76	+	.	.
scaffold43108	subtractBed	intrn	18539	18585	.	+	.	Parent=CGI_10008834;
	scaffold43108	TRF	Tandem_Repeat	18539	18585	94	+	.	.
scaffold43108	subtractBed	intrn	18539	18585	.	-	.	Parent=CGI_10008835;
	scaffold43108	TRF	Tandem_Repeat	18539	18585	94	+	.	.
scaffold43108	subtractBed	intrn	63292	63318	.	+	.	Parent=CGI_10008836;
	scaffold43108	TRF	Tandem_Repeat	63292	63318	54	+	.	.
scaffold43108	subtractBed	intrn	65822	66503	.	+	.	Parent=CGI_10008836;
	scaffold43108	TRF	Tandem_Repeat	65822	66503	986	+	.	.
scaffold43108	subtractBed	intrn	76921	76979	.	+	.	Parent=CGI_10008839;
	scaffold43108	TRF	Tandem_Repeat	76921	76979	118	+	.	.
scaffold43108	subtractBed	intrn	131732	131768	.	+	.	Parent=CGI_10008841;
	scaffold43108	TRF	Tandem_Repeat	131732	131768	74	+	.	.
scaffold43108	subtractBed	intrn	136105	136148	.	-	.	Parent=CGI_10008842;
	scaffold43108	TRF	Tandem_Repeat	136105	136148	88	+	.	.
scaffold43108	subtractBed	intrn	168563	168608	.	+	.	Parent=CGI_10008843;
	scaffold43108	TRF	Tandem_Repeat	168563	168608	83	+	.	.
scaffold43116	subtractBed	intrn	8340	8442	.	+	.	Parent=CGI_10008804;
	scaffold43116	TRF	Tandem_Repeat	8340	8442	163	+	.	.
scaffold43116	subtractBed	intrn	15371	15415	.	+	.	Parent=CGI_10008804;
	scaffold43116	TRF	Tandem_Repeat	15371	15415	90	+	.	.
scaffold43116	subtractBed	intrn	15371	15415	.	-	.	Parent=CGI_10008805;
	scaffold43116	TRF	Tandem_Repeat	15371	15415	90	+	.	.
scaffold43116	subtractBed	intrn	49276	49376	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	49276	49376	87	+	.	.
scaffold43116	subtractBed	intrn	51117	51307	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	51117	51307	138	+	.	.
scaffold43116	subtractBed	intrn	49141	49248	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	49141	49248	84	+	.	.
scaffold43116	subtractBed	intrn	54839	54998	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	54839	54998	241	+	.	.
scaffold43116	subtractBed	intrn	56326	56366	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	56326	56366	82	+	.	.
scaffold43116	subtractBed	intrn	56987	57039	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	56987	57039	61	+	.	.
scaffold43116	subtractBed	intrn	56993	57039	.	+	.	Parent=CGI_10008808;
	scaffold43116	TRF	Tandem_Repeat	56993	57039	62	+	.	.
scaffold43116	subtractBed	intrn	84473	84501	.	+	.	Parent=CGI_10008811;
	scaffold43116	TRF	Tandem_Repeat	84473	84501	58	+	.	.
scaffold43116	subtractBed	intrn	103888	104058	.	-	.	Parent=CGI_10008812;
	scaffold43116	WUBlastX	LTR_Gypsy	103888	104058	75	-	.	.
scaffold43116	subtractBed	intrn	103933	104070	.	-	.	Parent=CGI_10008812;
	scaffold43116	WUBlastX	LTR_Gypsy	103933	104070	78	-	.	.
scaffold43116	subtractBed	intrn	117314	117370	.	-	.	Parent=CGI_10008813;
	scaffold43116	TRF	Tandem_Repeat	117314	117370	105	+	.	.
scaffold43116	subtractBed	intrn	140271	141452	.	-	.	Parent=CGI_10008815;
	scaffold43116	WUBlastX	LTR_Gypsy	140271	141452	723	-	.	.
scaffold43116	subtractBed	intrn	145610	145648	.	+	.	Parent=CGI_10008816;
	scaffold43116	TRF	Tandem_Repeat	145610	145648	78	+	.	.
scaffold43116	subtractBed	intrn	170468	170521	.	-	.	Parent=CGI_10008817;
	scaffold43116	TRF	Tandem_Repeat	170468	170521	108	+	.	.
scaffold43116	subtractBed	intrn	170659	170730	.	-	.	Parent=CGI_10008817;
	scaffold43116	TRF	Tandem_Repeat	170659	170730	108	+	.	.
scaffold43116	subtractBed	intrn	205116	205152	.	-	.	Parent=CGI_10008821;
	scaffold43116	TRF	Tandem_Repeat	205116	205152	56	+	.	.
scaffold43122	subtractBed	intrn	11812	11850	.	-	.	Parent=CGI_10008930;
	scaffold43122	TRF	Tandem_Repeat	11812	11850	78	+	.	.
scaffold43122	subtractBed	intrn	19624	19771	.	-	.	Parent=CGI_10008930;
	scaffold43122	TRF	Tandem_Repeat	19624	19771	77	+	.	.
scaffold43122	subtractBed	intrn	20464	20632	.	-	.	Parent=CGI_10008930;
	scaffold43122	TRF	Tandem_Repeat	20464	20632	160	+	.	.
scaffold43122	subtractBed	intrn	22480	22527	.	-	.	Parent=CGI_10008930;
	scaffold43122	TRF	Tandem_Repeat	22480	22527	96	+	.	.
scaffold43122	subtractBed	intrn	31100	31139	.	+	.	Parent=CGI_10008931;
	scaffold43122	TRF	Tandem_Repeat	31100	31139	62	+	.	.
scaffold43122	subtractBed	intrn	51908	52295	.	+	.	Parent=CGI_10008933;
	scaffold43122	TRF	Tandem_Repeat	51887	52295	435	+	.	.
scaffold43122	subtractBed	intrn	116721	116755	.	-	.	Parent=CGI_10008940;
	scaffold43122	TRF	Tandem_Repeat	116721	116755	70	+	.	.
scaffold43122	subtractBed	intrn	116753	116811	.	-	.	Parent=CGI_10008940;
	scaffold43122	TRF	Tandem_Repeat	116753	116811	95	+	.	.
scaffold43122	subtractBed	intrn	135339	135494	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LINE_Penelope	135339	135494	46	+	.	.
scaffold43122	subtractBed	intrn	135500	136057	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LINE_Penelope	135500	136057	182	+	.	.
scaffold43122	subtractBed	intrn	136567	136612	.	-	.	Parent=CGI_10008940;
	scaffold43122	TRF	Tandem_Repeat	136567	136612	92	+	.	.
scaffold43122	subtractBed	intrn	145429	145917	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	145429	145917	268	+	.	.
scaffold43122	subtractBed	intrn	139544	139816	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	139544	139816	46	+	.	.
scaffold43122	subtractBed	intrn	139957	140142	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	139957	140142	110	+	.	.
scaffold43122	subtractBed	intrn	140960	141328	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	140960	141328	119	+	.	.
scaffold43122	subtractBed	intrn	141412	141546	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	141412	141546	23	+	.	.
scaffold43122	subtractBed	intrn	142929	143192	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	142929	143192	24	+	.	.
scaffold43122	subtractBed	intrn	143846	143968	.	-	.	Parent=CGI_10008940;
	scaffold43122	WUBlastX	LTR_DIRS	143846	143968	27	+	.	.
scaffold43122	subtractBed	intrn	181039	181071	.	-	.	Parent=CGI_10008941;
	scaffold43122	TRF	Tandem_Repeat	181039	181071	66	+	.	.
scaffold43130	subtractBed	intrn	4324	4361	.	-	.	Parent=CGI_10008957;
	scaffold43130	TRF	Tandem_Repeat	4324	4361	60	+	.	.
scaffold43130	subtractBed	intrn	35965	36060	.	+	.	Parent=CGI_10008958;
	scaffold43130	TRF	Tandem_Repeat	35965	36060	67	+	.	.
scaffold43130	subtractBed	intrn	35965	36060	.	-	.	Parent=CGI_10008959;
	scaffold43130	TRF	Tandem_Repeat	35965	36060	67	+	.	.
scaffold43130	subtractBed	intrn	108064	108099	.	-	.	Parent=CGI_10008963;
	scaffold43130	TRF	Tandem_Repeat	108064	108099	72	+	.	.
scaffold43130	subtractBed	intrn	115724	115765	.	-	.	Parent=CGI_10008963;
	scaffold43130	TRF	Tandem_Repeat	115724	115765	84	+	.	.
scaffold43130	subtractBed	intrn	122084	122569	.	-	.	Parent=CGI_10008963;
	scaffold43130	WUBlastX	LINE_RTE-X	122084	122569	52	+	.	.
scaffold43130	subtractBed	intrn	122180	122704	.	-	.	Parent=CGI_10008963;
	scaffold43130	WUBlastX	LINE_RTE-X	122180	122704	27	+	.	.
scaffold43130	subtractBed	intrn	122237	122569	.	-	.	Parent=CGI_10008963;
	scaffold43130	WUBlastX	LINE_RTE-X	122237	122569	81	+	.	.
scaffold43130	subtractBed	intrn	122354	122599	.	-	.	Parent=CGI_10008963;
	scaffold43130	WUBlastX	LINE_RTE-X	122354	122599	90	+	.	.
scaffold43130	subtractBed	intrn	166860	167051	.	-	.	Parent=CGI_10008964;
	scaffold43130	WUBlastX	LINE_CR1-L2	166860	167051	52	+	.	.
scaffold43130	subtractBed	intrn	173778	173812	.	-	.	Parent=CGI_10008964;
	scaffold43130	TRF	Tandem_Repeat	173778	173812	70	+	.	.
scaffold43130	subtractBed	intrn	182444	183736	.	-	.	Parent=CGI_10008964;
	scaffold43130	TRF	Tandem_Repeat	182444	183736	1572	+	.	.
scaffold43130	subtractBed	intrn	182168	183736	.	-	.	Parent=CGI_10008964;
	scaffold43130	TRF	Tandem_Repeat	182168	183736	1685	+	.	.
scaffold43130	subtractBed	intrn	183906	183948	.	-	.	Parent=CGI_10008964;
	scaffold43130	TRF	Tandem_Repeat	183906	183948	56	+	.	.
scaffold43134	subtractBed	intrn	33328	33376	.	-	.	Parent=CGI_10008887;
	scaffold43134	TRF	Tandem_Repeat	33328	33376	98	+	.	.
scaffold43134	subtractBed	intrn	113574	113623	.	+	.	Parent=CGI_10008894;
	scaffold43134	TRF	Tandem_Repeat	113574	113623	75	+	.	.
scaffold43134	subtractBed	intrn	113796	115702	.	+	.	Parent=CGI_10008894;
	scaffold43134	TRF	Tandem_Repeat	113796	115702	3593	+	.	.
scaffold43134	subtractBed	intrn	137535	138848	.	+	.	Parent=CGI_10008896;
	scaffold43134	WUBlastX	LINE_RTE-X	137535	138848	517	-	.	.
scaffold43134	subtractBed	intrn	138303	138962	.	+	.	Parent=CGI_10008896;
	scaffold43134	WUBlastX	LINE_RTE-BovB	138303	138962	58	-	.	.
scaffold43134	subtractBed	intrn	140825	140872	.	+	.	Parent=CGI_10008896;
	scaffold43134	TRF	Tandem_Repeat	140825	140872	96	+	.	.
scaffold43134	subtractBed	intrn	149233	151208	.	+	.	Parent=CGI_10008897;
	scaffold43134	TRF	Tandem_Repeat	149233	151208	3055	+	.	.
scaffold43134	subtractBed	intrn	160309	160359	.	+	.	Parent=CGI_10008897;
	scaffold43134	TRF	Tandem_Repeat	160309	160359	102	+	.	.
scaffold43134	subtractBed	intrn	161836	161883	.	+	.	Parent=CGI_10008897;
	scaffold43134	TRF	Tandem_Repeat	161836	161883	96	+	.	.
scaffold43134	subtractBed	intrn	211056	211280	.	+	.	Parent=CGI_10008898;
	scaffold43134	WUBlastX	DNA_IS4EU	211056	211280	45	+	.	.
scaffold43134	subtractBed	intrn	211417	211920	.	+	.	Parent=CGI_10008898;
	scaffold43134	WUBlastX	DNA_IS4EU	211417	211920	177	+	.	.
scaffold43134	subtractBed	intrn	212465	212468	.	+	.	Parent=CGI_10008898;
	scaffold43134	WUBlastX	DNA_IS4EU	212256	212468	114	-	.	.
scaffold43134	subtractBed	intrn	213753	213753	.	+	.	Parent=CGI_10008898;
	scaffold43134	WUBlastX	DNA_IS4EU	213753	213926	49	-	.	.
scaffold43134	subtractBed	intrn	214645	214647	.	+	.	Parent=CGI_10008898;
	scaffold43134	WUBlastX	DNA_IS4EU	214645	214956	54	-	.	.
scaffold43134	subtractBed	intrn	212465	212468	.	-	.	Parent=CGI_10008899;
	scaffold43134	WUBlastX	DNA_IS4EU	212256	212468	114	-	.	.
scaffold43134	subtractBed	intrn	213753	213753	.	-	.	Parent=CGI_10008899;
	scaffold43134	WUBlastX	DNA_IS4EU	213753	213926	49	-	.	.
scaffold43134	subtractBed	intrn	214645	214647	.	-	.	Parent=CGI_10008899;
	scaffold43134	WUBlastX	DNA_IS4EU	214645	214956	54	-	.	.
scaffold43136	subtractBed	intrn	67149	67453	.	-	.	Parent=CGI_10009002;
	scaffold43136	TRF	Tandem_Repeat	67149	67453	371	+	.	.
scaffold43136	subtractBed	intrn	67453	67901	.	-	.	Parent=CGI_10009002;
	scaffold43136	TRF	Tandem_Repeat	67453	67901	591	+	.	.
scaffold43136	subtractBed	intrn	70535	70835	.	-	.	Parent=CGI_10009002;
	scaffold43136	TRF	Tandem_Repeat	70535	70835	541	+	.	.
scaffold43136	subtractBed	intrn	71367	71437	.	-	.	Parent=CGI_10009002;
	scaffold43136	TRF	Tandem_Repeat	71367	71437	135	+	.	.
scaffold43136	subtractBed	intrn	71986	72043	.	-	.	Parent=CGI_10009002;
	scaffold43136	TRF	Tandem_Repeat	71986	72043	109	+	.	.
scaffold43146	subtractBed	intrn	90157	90264	.	+	.	Parent=CGI_10009042;
	scaffold43146	TRF	Tandem_Repeat	90157	90264	171	+	.	.
scaffold43146	subtractBed	intrn	93272	93332	.	+	.	Parent=CGI_10009042;
	scaffold43146	TRF	Tandem_Repeat	93272	93332	99	+	.	.
scaffold43146	subtractBed	intrn	99553	99654	.	+	.	Parent=CGI_10009042;
	scaffold43146	TRF	Tandem_Repeat	99553	99654	150	+	.	.
scaffold43146	subtractBed	intrn	99553	99654	.	+	.	Parent=CGI_10009042;
	scaffold43146	TRF	Tandem_Repeat	99553	99654	161	+	.	.
scaffold43146	subtractBed	intrn	102864	103298	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	102864	103298	55	-	.	.
scaffold43146	subtractBed	intrn	104139	104378	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	104139	104378	84	-	.	.
scaffold43146	subtractBed	intrn	106834	107064	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	106834	107064	86	-	.	.
scaffold43146	subtractBed	intrn	104079	104381	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	104079	104381	77	-	.	.
scaffold43146	subtractBed	intrn	106607	106729	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	106607	106729	41	-	.	.
scaffold43146	subtractBed	intrn	104181	104381	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_Kolobok-IS4	104181	104381	97	-	.	.
scaffold43146	subtractBed	intrn	102864	103028	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_Kolobok-IS4	102864	103028	58	-	.	.
scaffold43146	subtractBed	intrn	105006	105080	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_Kolobok-IS4	105006	105080	32	-	.	.
scaffold43146	subtractBed	intrn	106067	106387	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_Kolobok-IS4	106067	106387	54	-	.	.
scaffold43146	subtractBed	intrn	101062	101268	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	101062	101268	32	+	.	.
scaffold43146	subtractBed	intrn	101285	101386	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	101285	101386	54	+	.	.
scaffold43146	subtractBed	intrn	101388	102017	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	101388	102017	185	+	.	.
scaffold43146	subtractBed	intrn	102025	102570	.	+	.	Parent=CGI_10009042;
	scaffold43146	WUBlastX	DNA_IS4EU	102025	102570	130	+	.	.
scaffold43146	subtractBed	intrn	129089	129126	.	+	.	Parent=CGI_10009045;
	scaffold43146	TRF	Tandem_Repeat	129089	129126	76	+	.	.
scaffold43146	subtractBed	intrn	196277	196303	.	-	.	Parent=CGI_10009047;
	scaffold43146	WUBlastX	LINE_L1	196277	196303	23	+	.	.
scaffold43146	subtractBed	intrn	196378	196467	.	-	.	Parent=CGI_10009047;
	scaffold43146	WUBlastX	LINE_L1	196378	196467	21	+	.	.
scaffold43146	subtractBed	intrn	196864	197766	.	-	.	Parent=CGI_10009047;
	scaffold43146	WUBlastX	LINE_L1-Tx1	196864	197766	218	+	.	.
scaffold43146	subtractBed	intrn	196864	197607	.	-	.	Parent=CGI_10009047;
	scaffold43146	WUBlastX	LINE_L1-Tx1	196864	197607	221	+	.	.
scaffold43146	subtractBed	intrn	197714	198019	.	-	.	Parent=CGI_10009047;
	scaffold43146	WUBlastX	LINE_L1-Tx1	197714	198019	50	+	.	.
scaffold43150	subtractBed	intrn	74054	74100	.	+	.	Parent=CGI_10009031;
	scaffold43150	TRF	Tandem_Repeat	74054	74100	94	+	.	.
scaffold43150	subtractBed	intrn	76604	76659	.	+	.	Parent=CGI_10009031;
	scaffold43150	TRF	Tandem_Repeat	76604	76659	112	+	.	.
scaffold43150	subtractBed	intrn	103616	103654	.	-	.	Parent=CGI_10009032;
	scaffold43150	TRF	Tandem_Repeat	103616	103654	53	+	.	.
scaffold43150	subtractBed	intrn	103613	103674	.	-	.	Parent=CGI_10009032;
	scaffold43150	TRF	Tandem_Repeat	103613	103674	67	+	.	.
scaffold43150	subtractBed	intrn	108801	109400	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_RTE-X	108801	109400	135	+	.	.
scaffold43150	subtractBed	intrn	105094	105421	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_RTE-X	105065	105421	217	+	.	.
scaffold43150	subtractBed	intrn	105479	107569	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_RTE-X	105479	107569	1253	+	.	.
scaffold43150	subtractBed	intrn	107964	109241	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_RTE-X	107964	109241	872	+	.	.
scaffold43150	subtractBed	intrn	107835	108650	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_RTE-BovB	107835	108650	142	+	.	.
scaffold43150	subtractBed	intrn	107545	107688	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_CR1	107545	107688	29	+	.	.
scaffold43150	subtractBed	intrn	107090	107659	.	-	.	Parent=CGI_10009032;
	scaffold43150	WUBlastX	LINE_L1	107090	107659	48	+	.	.
scaffold43150	subtractBed	intrn	133382	137185	.	+	.	Parent=CGI_10009035;
	scaffold43150	WUBlastX	LINE_L1-Tx1	133382	137185	1935	+	.	.
scaffold43150	subtractBed	intrn	132133	132936	.	+	.	Parent=CGI_10009035;
	scaffold43150	WUBlastX	LINE_L1	132133	132936	43	+	.	.
scaffold43150	subtractBed	intrn	132349	133071	.	+	.	Parent=CGI_10009035;
	scaffold43150	WUBlastX	LINE_L2	132349	133071	129	+	.	.
scaffold43150	subtractBed	intrn	167137	167182	.	-	.	Parent=CGI_10009040;
	scaffold43150	TRF	Tandem_Repeat	167137	167182	92	+	.	.
scaffold43150	subtractBed	intrn	174285	174463	.	-	.	Parent=CGI_10009040;
	scaffold43150	TRF	Tandem_Repeat	174285	174463	331	+	.	.
scaffold43150	subtractBed	intrn	187279	187345	.	+	.	Parent=CGI_10009041;
	scaffold43150	TRF	Tandem_Repeat	187279	187345	125	+	.	.
scaffold43150	subtractBed	intrn	199351	199384	.	+	.	Parent=CGI_10009041;
	scaffold43150	TRF	Tandem_Repeat	199351	199384	68	+	.	.
scaffold43170	subtractBed	intrn	29566	29808	.	-	.	Parent=CGI_10009100;
	scaffold43170	WUBlastX	LINE_RTE-BovB	29566	29808	113	+	.	.
scaffold43170	subtractBed	intrn	28705	29094	.	-	.	Parent=CGI_10009100;
	scaffold43170	WUBlastX	LINE_RTE-BovB	28705	29094	280	+	.	.
scaffold43170	subtractBed	intrn	44407	45212	.	-	.	Parent=CGI_10009100;
	scaffold43170	TRF	Tandem_Repeat	44407	45212	933	+	.	.
scaffold43170	subtractBed	intrn	70963	71020	.	-	.	Parent=CGI_10009101;
	scaffold43170	TRF	Tandem_Repeat	70963	71020	57	+	.	.
scaffold43170	subtractBed	intrn	115769	115797	.	-	.	Parent=CGI_10009102;
	scaffold43170	TRF	Tandem_Repeat	115769	115797	58	+	.	.
scaffold43170	subtractBed	intrn	116007	116393	.	-	.	Parent=CGI_10009102;
	scaffold43170	WUBlastX	DNA_Zator	116007	116393	86	-	.	.
scaffold43170	subtractBed	intrn	116499	118222	.	-	.	Parent=CGI_10009102;
	scaffold43170	WUBlastX	DNA_Zator	116499	118718	922	-	.	.
scaffold43170	subtractBed	intrn	116010	116609	.	-	.	Parent=CGI_10009102;
	scaffold43170	WUBlastX	DNA_Zator	116010	116609	67	-	.	.
scaffold43170	subtractBed	intrn	115769	115797	.	+	.	Parent=CGI_10009103;
	scaffold43170	TRF	Tandem_Repeat	115769	115797	58	+	.	.
scaffold43170	subtractBed	intrn	116007	116393	.	+	.	Parent=CGI_10009103;
	scaffold43170	WUBlastX	DNA_Zator	116007	116393	86	-	.	.
scaffold43170	subtractBed	intrn	116499	118222	.	+	.	Parent=CGI_10009103;
	scaffold43170	WUBlastX	DNA_Zator	116499	118718	922	-	.	.
scaffold43170	subtractBed	intrn	116010	116609	.	+	.	Parent=CGI_10009103;
	scaffold43170	WUBlastX	DNA_Zator	116010	116609	67	-	.	.
scaffold43170	subtractBed	intrn	118629	118718	.	+	.	Parent=CGI_10009103;
	scaffold43170	WUBlastX	DNA_Zator	116499	118718	922	-	.	.
scaffold43170	subtractBed	intrn	130053	131423	.	+	.	Parent=CGI_10009103;
	scaffold43170	WUBlastX	LINE_L1-Tx1	130053	131423	334	+	.	.
scaffold43170	subtractBed	intrn	159363	159448	.	+	.	Parent=CGI_10009104;
	scaffold43170	TRF	Tandem_Repeat	159363	159448	106	+	.	.
scaffold43170	subtractBed	intrn	159363	159448	.	+	.	Parent=CGI_10009104;
	scaffold43170	TRF	Tandem_Repeat	159363	159448	104	+	.	.
scaffold43170	subtractBed	intrn	176001	176044	.	+	.	Parent=CGI_10009104;
	scaffold43170	TRF	Tandem_Repeat	176001	176044	70	+	.	.
scaffold43170	subtractBed	intrn	176014	176047	.	+	.	Parent=CGI_10009104;
	scaffold43170	TRF	Tandem_Repeat	176014	176047	50	+	.	.
scaffold43170	subtractBed	intrn	204603	204656	.	+	.	Parent=CGI_10009105;
	scaffold43170	TRF	Tandem_Repeat	204603	204656	108	+	.	.
scaffold43170	subtractBed	intrn	209028	209107	.	+	.	Parent=CGI_10009105;
	scaffold43170	TRF	Tandem_Repeat	209028	209107	115	+	.	.
scaffold43170	subtractBed	intrn	209028	209107	.	+	.	Parent=CGI_10009105;
	scaffold43170	TRF	Tandem_Repeat	209028	209107	115	+	.	.
scaffold43182	subtractBed	intrn	32134	32174	.	+	.	Parent=CGI_10009197;
	scaffold43182	TRF	Tandem_Repeat	32134	32174	82	+	.	.
scaffold43182	subtractBed	intrn	38000	38275	.	+	.	Parent=CGI_10009197;
	scaffold43182	WUBlastX	DNA_Sola	38000	38275	20	-	.	.
scaffold43182	subtractBed	intrn	38508	38978	.	+	.	Parent=CGI_10009197;
	scaffold43182	WUBlastX	DNA_Sola	38508	38978	30	-	.	.
scaffold43182	subtractBed	intrn	67448	68250	.	-	.	Parent=CGI_10009198;
	scaffold43182	TRF	Tandem_Repeat	67448	68250	1112	+	.	.
scaffold43182	subtractBed	intrn	72815	72855	.	-	.	Parent=CGI_10009198;
	scaffold43182	TRF	Tandem_Repeat	72815	72855	82	+	.	.
scaffold43182	subtractBed	intrn	86677	86721	.	+	.	Parent=CGI_10009199;
	scaffold43182	TRF	Tandem_Repeat	86677	86721	90	+	.	.
scaffold43182	subtractBed	intrn	99848	100144	.	+	.	Parent=CGI_10009200;
	scaffold43182	WUBlastX	DNA_TcMar-Tc1	99848	100144	65	+	.	.
scaffold43182	subtractBed	intrn	98620	98982	.	+	.	Parent=CGI_10009200;
	scaffold43182	WUBlastX	LTR_Ngaro	98620	98982	62	-	.	.
scaffold43182	subtractBed	intrn	99596	99808	.	+	.	Parent=CGI_10009200;
	scaffold43182	WUBlastX	DNA_TcMar-Tc1	99596	99808	34	+	.	.
scaffold43182	subtractBed	intrn	99638	99811	.	+	.	Parent=CGI_10009200;
	scaffold43182	WUBlastX	DNA_TcMar-Tc1	99638	99811	40	+	.	.
scaffold43182	subtractBed	intrn	110832	110934	.	-	.	Parent=CGI_10009201;
	scaffold43182	TRF	Tandem_Repeat	110832	110934	57	+	.	.
scaffold43182	subtractBed	intrn	111958	112803	.	-	.	Parent=CGI_10009201;
	scaffold43182	WUBlastX	LINE_L2	111958	112803	110	-	.	.
scaffold43182	subtractBed	intrn	148651	148824	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_Kolobok	148651	148824	76	-	.	.
scaffold43182	subtractBed	intrn	148862	149101	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_Kolobok	148862	149101	74	-	.	.
scaffold43182	subtractBed	intrn	148563	148804	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_Kolobok	148412	148804	69	-	.	.
scaffold43182	subtractBed	intrn	166486	166776	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	166486	166776	111	+	.	.
scaffold43182	subtractBed	intrn	167949	168011	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy-Gmr1	167949	168011	26	+	.	.
scaffold43182	subtractBed	intrn	168273	168383	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy-Gmr1	168273	168383	26	+	.	.
scaffold43182	subtractBed	intrn	166179	166463	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	166179	166463	24	+	.	.
scaffold43182	subtractBed	intrn	166335	166466	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	166335	166466	52	+	.	.
scaffold43182	subtractBed	intrn	170172	170225	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	170172	170225	25	+	.	.
scaffold43182	subtractBed	intrn	166299	166466	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	166299	166466	51	+	.	.
scaffold43182	subtractBed	intrn	169423	170115	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	169423	170115	137	+	.	.
scaffold43182	subtractBed	intrn	166266	166469	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	166266	166469	41	+	.	.
scaffold43182	subtractBed	intrn	168404	168475	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	168404	168475	30	+	.	.
scaffold43182	subtractBed	intrn	169423	169950	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	169423	169950	145	+	.	.
scaffold43182	subtractBed	intrn	167988	168020	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	167988	168020	25	+	.	.
scaffold43182	subtractBed	intrn	167708	167899	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy	167708	167899	32	+	.	.
scaffold43182	subtractBed	intrn	166389	166472	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_ERV1	166389	166472	55	+	.	.
scaffold43182	subtractBed	intrn	166546	166821	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LTR_Gypsy-Cigr	166546	166821	65	+	.	.
scaffold43182	subtractBed	intrn	178654	178706	.	-	.	Parent=CGI_10009203;
	scaffold43182	TRF	Tandem_Repeat	178654	178706	106	+	.	.
scaffold43182	subtractBed	intrn	172153	172671	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	LINE_L1-Tx1	172153	172671	140	-	.	.
scaffold43182	subtractBed	intrn	182534	182601	.	-	.	Parent=CGI_10009203;
	scaffold43182	TRF	Tandem_Repeat	182534	182601	100	+	.	.
scaffold43182	subtractBed	intrn	185331	185381	.	-	.	Parent=CGI_10009203;
	scaffold43182	TRF	Tandem_Repeat	185331	185381	102	+	.	.
scaffold43182	subtractBed	intrn	187518	187877	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_En-Spm	187518	187877	64	+	.	.
scaffold43182	subtractBed	intrn	187865	189112	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_En-Spm	187865	189112	570	+	.	.
scaffold43182	subtractBed	intrn	187889	189517	.	-	.	Parent=CGI_10009203;
	scaffold43182	WUBlastX	DNA_En-Spm	187889	189517	418	+	.	.
scaffold43184	subtractBed	intrn	72964	73031	.	+	.	Parent=CGI_10009112;
	scaffold43184	TRF	Tandem_Repeat	72964	73031	61	+	.	.
scaffold43184	subtractBed	intrn	88723	88886	.	+	.	Parent=CGI_10009112;
	scaffold43184	TRF	Tandem_Repeat	88723	88886	119	+	.	.
scaffold43184	subtractBed	intrn	188494	188561	.	-	.	Parent=CGI_10009117;
	scaffold43184	TRF	Tandem_Repeat	188494	188561	64	+	.	.
scaffold43194	subtractBed	intrn	40303	40464	.	+	.	Parent=CGI_10009249;
	scaffold43194	TRF	Tandem_Repeat	40303	40464	279	+	.	.
scaffold43194	subtractBed	intrn	53395	53431	.	+	.	Parent=CGI_10009250;
	scaffold43194	TRF	Tandem_Repeat	53395	53431	65	+	.	.
scaffold43194	subtractBed	intrn	72835	72886	.	-	.	Parent=CGI_10009252;
	scaffold43194	TRF	Tandem_Repeat	72835	72886	104	+	.	.
scaffold43194	subtractBed	intrn	114134	114201	.	-	.	Parent=CGI_10009254;
	scaffold43194	TRF	Tandem_Repeat	114134	114201	120	+	.	.
scaffold43194	subtractBed	intrn	114493	114541	.	-	.	Parent=CGI_10009254;
	scaffold43194	TRF	Tandem_Repeat	114493	114541	98	+	.	.
scaffold43194	subtractBed	intrn	130738	130777	.	-	.	Parent=CGI_10009255;
	scaffold43194	TRF	Tandem_Repeat	130738	130777	80	+	.	.
scaffold43194	subtractBed	intrn	137005	137101	.	-	.	Parent=CGI_10009255;
	scaffold43194	TRF	Tandem_Repeat	137005	137101	160	+	.	.
scaffold43194	subtractBed	intrn	137007	137093	.	-	.	Parent=CGI_10009255;
	scaffold43194	TRF	Tandem_Repeat	137007	137093	56	+	.	.
scaffold43194	subtractBed	intrn	138285	138330	.	-	.	Parent=CGI_10009255;
	scaffold43194	TRF	Tandem_Repeat	138285	138330	92	+	.	.
scaffold43194	subtractBed	intrn	140679	140718	.	-	.	Parent=CGI_10009255;
	scaffold43194	TRF	Tandem_Repeat	140679	140718	62	+	.	.
scaffold43194	subtractBed	intrn	147085	147173	.	+	.	Parent=CGI_10009256;
	scaffold43194	TRF	Tandem_Repeat	147085	147173	72	+	.	.
scaffold43194	subtractBed	intrn	148767	148821	.	+	.	Parent=CGI_10009256;
	scaffold43194	TRF	Tandem_Repeat	148767	148821	110	+	.	.
scaffold43194	subtractBed	intrn	149603	149637	.	+	.	Parent=CGI_10009256;
	scaffold43194	TRF	Tandem_Repeat	149603	149637	70	+	.	.
scaffold43194	subtractBed	intrn	156483	156527	.	+	.	Parent=CGI_10009256;
	scaffold43194	TRF	Tandem_Repeat	156483	156527	90	+	.	.
scaffold43194	subtractBed	intrn	175759	175861	.	+	.	Parent=CGI_10009257;
	scaffold43194	TRF	Tandem_Repeat	175759	175861	206	+	.	.
scaffold43194	subtractBed	intrn	179921	179950	.	+	.	Parent=CGI_10009257;
	scaffold43194	TRF	Tandem_Repeat	179921	179950	60	+	.	.
scaffold43194	subtractBed	intrn	194414	194441	.	-	.	Parent=CGI_10009258;
	scaffold43194	TRF	Tandem_Repeat	194414	194441	56	+	.	.
scaffold432	subtractBed	intrn	14221	14368	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	14221	14368	111	+	.	.
scaffold432	subtractBed	intrn	14225	14368	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	14225	14368	91	+	.	.
scaffold432	subtractBed	intrn	16913	17108	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	16913	17108	95	+	.	.
scaffold432	subtractBed	intrn	16905	17146	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	16905	17146	466	+	.	.
scaffold432	subtractBed	intrn	16937	17172	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	16937	17172	172	+	.	.
scaffold432	subtractBed	intrn	17152	17277	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	17152	17277	173	+	.	.
scaffold432	subtractBed	intrn	31704	31761	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	31704	31761	61	+	.	.
scaffold432	subtractBed	intrn	31690	31787	.	+	.	Parent=CGI_10023076;
	scaffold432	TRF	Tandem_Repeat	31690	31787	162	+	.	.
scaffold432	subtractBed	intrn	48795	48838	.	-	.	Parent=CGI_10023077;
	scaffold432	TRF	Tandem_Repeat	48795	48838	88	+	.	.
scaffold432	subtractBed	intrn	178983	179309	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	178983	179309	146	+	.	.
scaffold432	subtractBed	intrn	178983	179324	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	178983	179324	270	+	.	.
scaffold432	subtractBed	intrn	179375	179504	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	179375	179504	89	+	.	.
scaffold432	subtractBed	intrn	179565	179766	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	179565	179766	296	+	.	.
scaffold432	subtractBed	intrn	183546	184074	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	183546	184074	592	+	.	.
scaffold432	subtractBed	intrn	183546	184074	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	183546	184074	640	+	.	.
scaffold432	subtractBed	intrn	184141	184296	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	184141	184296	303	+	.	.
scaffold432	subtractBed	intrn	186527	187233	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	186527	187233	1258	+	.	.
scaffold432	subtractBed	intrn	188956	189433	.	-	.	Parent=CGI_10023085;
	scaffold432	TRF	Tandem_Repeat	188956	189450	740	+	.	.
scaffold432	subtractBed	intrn	194527	194555	.	+	.	Parent=CGI_10023086;
	scaffold432	TRF	Tandem_Repeat	194527	194555	51	+	.	.
scaffold432	subtractBed	intrn	215807	215850	.	-	.	Parent=CGI_10023089;
	scaffold432	TRF	Tandem_Repeat	215807	215850	88	+	.	.
scaffold432	subtractBed	intrn	239413	239693	.	+	.	Parent=CGI_10023091;
	scaffold432	TRF	Tandem_Repeat	239393	239693	433	+	.	.
scaffold432	subtractBed	intrn	241430	241664	.	+	.	Parent=CGI_10023091;
	scaffold432	TRF	Tandem_Repeat	241430	241664	328	+	.	.
scaffold432	subtractBed	intrn	244495	245283	.	+	.	Parent=CGI_10023091;
	scaffold432	WUBlastX	LINE_L2	244495	245283	350	-	.	.
scaffold432	subtractBed	intrn	244285	245301	.	+	.	Parent=CGI_10023091;
	scaffold432	WUBlastX	LINE_L2	244285	245301	66	-	.	.
scaffold432	subtractBed	intrn	245315	247345	.	+	.	Parent=CGI_10023091;
	scaffold432	WUBlastX	LINE_L2	245315	247345	784	-	.	.
scaffold432	subtractBed	intrn	252921	253064	.	+	.	Parent=CGI_10023091;
	scaffold432	TRF	Tandem_Repeat	252921	253064	139	+	.	.
scaffold432	subtractBed	intrn	254590	254733	.	+	.	Parent=CGI_10023091;
	scaffold432	TRF	Tandem_Repeat	254590	254733	243	+	.	.
scaffold432	subtractBed	intrn	256583	256825	.	+	.	Parent=CGI_10023091;
	scaffold432	TRF	Tandem_Repeat	256579	256825	433	+	.	.
scaffold432	subtractBed	intrn	308705	308783	.	+	.	Parent=CGI_10023095;
	scaffold432	TRF	Tandem_Repeat	308705	308783	62	+	.	.
scaffold432	subtractBed	intrn	313470	313948	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	313470	313948	861	+	.	.
scaffold432	subtractBed	intrn	316661	317044	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316661	317044	176	+	.	.
scaffold432	subtractBed	intrn	316683	317067	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316683	317067	83	+	.	.
scaffold432	subtractBed	intrn	316679	317048	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316679	317048	208	+	.	.
scaffold432	subtractBed	intrn	316661	317046	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316661	317046	301	+	.	.
scaffold432	subtractBed	intrn	316714	317065	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316714	317065	359	+	.	.
scaffold432	subtractBed	intrn	316829	317070	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	316829	317070	216	+	.	.
scaffold432	subtractBed	intrn	318575	318681	.	+	.	Parent=CGI_10023096;
	scaffold432	TRF	Tandem_Repeat	318575	318681	133	+	.	.
scaffold432	subtractBed	intrn	358176	358233	.	+	.	Parent=CGI_10023100;
	scaffold432	TRF	Tandem_Repeat	358176	358233	116	+	.	.
scaffold432	subtractBed	intrn	359753	359809	.	+	.	Parent=CGI_10023100;
	scaffold432	TRF	Tandem_Repeat	359753	359809	114	+	.	.
scaffold432	subtractBed	intrn	369414	369463	.	+	.	Parent=CGI_10023101;
	scaffold432	TRF	Tandem_Repeat	369414	369463	66	+	.	.
scaffold432	subtractBed	intrn	369913	370024	.	+	.	Parent=CGI_10023101;
	scaffold432	WUBlastX	DNA_hAT	369776	370048	48	+	.	.
scaffold432	subtractBed	intrn	443519	443565	.	-	.	Parent=CGI_10023104;
	scaffold432	TRF	Tandem_Repeat	443519	443565	53	+	.	.
scaffold432	subtractBed	intrn	457906	457954	.	-	.	Parent=CGI_10023105;
	scaffold432	TRF	Tandem_Repeat	457906	457954	71	+	.	.
scaffold432	subtractBed	intrn	572633	572689	.	+	.	Parent=CGI_10023108;
	scaffold432	TRF	Tandem_Repeat	572633	572689	114	+	.	.
scaffold432	subtractBed	intrn	585999	586025	.	+	.	Parent=CGI_10023109;
	scaffold432	TRF	Tandem_Repeat	585999	586025	54	+	.	.
scaffold432	subtractBed	intrn	587886	587943	.	+	.	Parent=CGI_10023109;
	scaffold432	TRF	Tandem_Repeat	587886	587943	116	+	.	.
scaffold432	subtractBed	intrn	596125	596168	.	+	.	Parent=CGI_10023109;
	scaffold432	TRF	Tandem_Repeat	596125	596168	88	+	.	.
scaffold432	subtractBed	intrn	612172	612593	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	612172	612593	332	+	.	.
scaffold432	subtractBed	intrn	612252	612659	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	612252	612659	271	+	.	.
scaffold432	subtractBed	intrn	612384	612593	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	612384	612593	271	+	.	.
scaffold432	subtractBed	intrn	612723	612852	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	612723	612852	138	+	.	.
scaffold432	subtractBed	intrn	614966	614990	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	614966	614990	50	+	.	.
scaffold432	subtractBed	intrn	615105	615146	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	615105	615146	84	+	.	.
scaffold432	subtractBed	intrn	629466	629517	.	+	.	Parent=CGI_10023111;
	scaffold432	TRF	Tandem_Repeat	629466	629517	104	+	.	.
scaffold432	subtractBed	intrn	652127	652151	.	-	.	Parent=CGI_10023114;
	scaffold432	TRF	Tandem_Repeat	652127	652151	50	+	.	.
scaffold432	subtractBed	intrn	674406	674493	.	-	.	Parent=CGI_10023117;
	scaffold432	TRF	Tandem_Repeat	674406	674493	77	+	.	.
scaffold432	subtractBed	intrn	692159	692192	.	-	.	Parent=CGI_10023118;
	scaffold432	TRF	Tandem_Repeat	692159	692192	50	+	.	.
scaffold432	subtractBed	intrn	721027	721149	.	-	.	Parent=CGI_10023119;
	scaffold432	WUBlastX	DNA_hAT	720897	721373	34	-	.	.
scaffold432	subtractBed	intrn	721328	721373	.	-	.	Parent=CGI_10023119;
	scaffold432	WUBlastX	DNA_hAT	720897	721373	34	-	.	.
scaffold432	subtractBed	intrn	724520	725299	.	-	.	Parent=CGI_10023119;
	scaffold432	WUBlastX	DNA_hAT	724520	725299	76	-	.	.
scaffold432	subtractBed	intrn	732447	732950	.	-	.	Parent=CGI_10023120;
	scaffold432	WUBlastX	DNA_Crypton	732447	732950	85	-	.	.
scaffold432	subtractBed	intrn	729038	729104	.	-	.	Parent=CGI_10023120;
	scaffold432	WUBlastX	DNA_Crypton	728706	729104	43	-	.	.
scaffold432	subtractBed	intrn	732124	732453	.	-	.	Parent=CGI_10023120;
	scaffold432	WUBlastX	DNA_Crypton	732124	732453	110	-	.	.
scaffold432	subtractBed	intrn	792919	793454	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	792919	793454	549	+	.	.
scaffold432	subtractBed	intrn	792935	793446	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	792935	793446	618	+	.	.
scaffold432	subtractBed	intrn	792990	793448	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	792990	793448	248	+	.	.
scaffold432	subtractBed	intrn	800330	800354	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	800330	800354	50	+	.	.
scaffold432	subtractBed	intrn	801064	801099	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	801064	801099	63	+	.	.
scaffold432	subtractBed	intrn	803211	803379	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	803211	803379	266	+	.	.
scaffold432	subtractBed	intrn	803358	803512	.	+	.	Parent=CGI_10023124;
	scaffold432	TRF	Tandem_Repeat	803358	803512	135	+	.	.
scaffold43200	subtractBed	intrn	102454	102816	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	LINE_L1-Tx1	102454	102816	42	+	.	.
scaffold43200	subtractBed	intrn	117141	117215	.	+	.	Parent=CGI_10009329;
	scaffold43200	TRF	Tandem_Repeat	117141	117215	150	+	.	.
scaffold43200	subtractBed	intrn	124591	125238	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	DNA_TcMar-Tc1	124591	125238	230	-	.	.
scaffold43200	subtractBed	intrn	123111	123443	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	LINE_R2-Hero	123111	123443	71	+	.	.
scaffold43200	subtractBed	intrn	123225	123443	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	LINE_R2-Hero	123225	123443	93	+	.	.
scaffold43200	subtractBed	intrn	123207	123563	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	LINE_R2-Hero	123207	123563	75	+	.	.
scaffold43200	subtractBed	intrn	123609	123815	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	LINE_R2-Hero	123609	123815	70	+	.	.
scaffold43200	subtractBed	intrn	124591	125613	.	+	.	Parent=CGI_10009329;
	scaffold43200	WUBlastX	DNA_TcMar-Tc1	124591	125613	226	-	.	.
scaffold43200	subtractBed	intrn	226918	227043	.	-	.	Parent=CGI_10009333;
	scaffold43200	TRF	Tandem_Repeat	226918	227043	57	+	.	.
scaffold43200	subtractBed	intrn	226905	228285	.	-	.	Parent=CGI_10009333;
	scaffold43200	TRF	Tandem_Repeat	226905	228285	1758	+	.	.
scaffold43206	subtractBed	intrn	14796	14926	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	14796	14926	76	+	.	.
scaffold43206	subtractBed	intrn	14722	15000	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	14722	15000	145	+	.	.
scaffold43206	subtractBed	intrn	19982	20122	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	19982	20122	158	+	.	.
scaffold43206	subtractBed	intrn	19970	20122	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	19970	20122	137	+	.	.
scaffold43206	subtractBed	intrn	31525	31569	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	31525	31569	90	+	.	.
scaffold43206	subtractBed	intrn	31803	31844	.	-	.	Parent=CGI_10009261;
	scaffold43206	TRF	Tandem_Repeat	31803	31844	50	+	.	.
scaffold43206	subtractBed	intrn	179940	180219	.	+	.	Parent=CGI_10009273;
	scaffold43206	TRF	Tandem_Repeat	179940	180219	225	+	.	.
scaffold43206	subtractBed	intrn	179897	180219	.	+	.	Parent=CGI_10009273;
	scaffold43206	TRF	Tandem_Repeat	179897	180219	212	+	.	.
scaffold43206	subtractBed	intrn	212259	212800	.	+	.	Parent=CGI_10009278;
	scaffold43206	TRF	Tandem_Repeat	212244	212800	653	+	.	.
scaffold43208	subtractBed	intrn	2328	2411	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	2328	2411	105	+	.	.
scaffold43208	subtractBed	intrn	2328	2411	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	2328	2411	105	+	.	.
scaffold43208	subtractBed	intrn	3027	3211	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	3027	3211	289	+	.	.
scaffold43208	subtractBed	intrn	3773	3893	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	3773	3893	217	+	.	.
scaffold43208	subtractBed	intrn	5455	5509	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	5455	5509	110	+	.	.
scaffold43208	subtractBed	intrn	14038	14071	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	14038	14071	68	+	.	.
scaffold43208	subtractBed	intrn	14141	14174	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	14141	14174	68	+	.	.
scaffold43208	subtractBed	intrn	14657	16617	.	-	.	Parent=CGI_10009353;
	scaffold43208	TRF	Tandem_Repeat	14657	16617	438	+	.	.
scaffold43208	subtractBed	intrn	20170	20229	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	20170	20229	111	+	.	.
scaffold43208	subtractBed	intrn	20406	20486	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	20406	20486	58	+	.	.
scaffold43208	subtractBed	intrn	20406	20489	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	20406	20489	70	+	.	.
scaffold43208	subtractBed	intrn	28557	28583	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	28557	28583	54	+	.	.
scaffold43208	subtractBed	intrn	34517	34552	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	34517	34552	72	+	.	.
scaffold43208	subtractBed	intrn	34661	34705	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	34661	34705	83	+	.	.
scaffold43208	subtractBed	intrn	39997	40049	.	-	.	Parent=CGI_10009354;
	scaffold43208	TRF	Tandem_Repeat	39997	40049	90	+	.	.
scaffold43208	subtractBed	intrn	96086	96141	.	+	.	Parent=CGI_10009357;
	scaffold43208	TRF	Tandem_Repeat	96086	96141	112	+	.	.
scaffold43208	subtractBed	intrn	96657	96690	.	+	.	Parent=CGI_10009357;
	scaffold43208	TRF	Tandem_Repeat	96657	96690	68	+	.	.
scaffold43208	subtractBed	intrn	125218	125276	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	125218	125276	118	+	.	.
scaffold43208	subtractBed	intrn	125370	125424	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	125370	125424	110	+	.	.
scaffold43208	subtractBed	intrn	128773	128832	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	128773	128832	54	+	.	.
scaffold43208	subtractBed	intrn	132609	132787	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	132609	132787	160	+	.	.
scaffold43208	subtractBed	intrn	133152	133194	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	133152	133194	86	+	.	.
scaffold43208	subtractBed	intrn	134291	134360	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	134291	134360	79	+	.	.
scaffold43208	subtractBed	intrn	135228	136346	.	+	.	Parent=CGI_10009358;
	scaffold43208	WUBlastX	LINE_RTE-X	135228	136346	407	-	.	.
scaffold43208	subtractBed	intrn	135114	136430	.	+	.	Parent=CGI_10009358;
	scaffold43208	WUBlastX	LINE_RTE-X	135114	136430	341	-	.	.
scaffold43208	subtractBed	intrn	138882	138927	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	138882	138927	92	+	.	.
scaffold43208	subtractBed	intrn	139582	139638	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	139582	139638	114	+	.	.
scaffold43208	subtractBed	intrn	155377	155417	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	155377	155417	82	+	.	.
scaffold43208	subtractBed	intrn	155611	155643	.	+	.	Parent=CGI_10009358;
	scaffold43208	TRF	Tandem_Repeat	155611	155643	66	+	.	.
scaffold43208	subtractBed	intrn	211438	211481	.	+	.	Parent=CGI_10009359;
	scaffold43208	TRF	Tandem_Repeat	211438	211481	88	+	.	.
scaffold43208	subtractBed	intrn	222468	222533	.	+	.	Parent=CGI_10009359;
	scaffold43208	TRF	Tandem_Repeat	222468	222533	132	+	.	.
scaffold43208	subtractBed	intrn	222748	222777	.	+	.	Parent=CGI_10009359;
	scaffold43208	TRF	Tandem_Repeat	222748	222777	60	+	.	.
scaffold43210	subtractBed	intrn	19866	19939	.	+	.	Parent=CGI_10009439;
	scaffold43210	TRF	Tandem_Repeat	19866	19939	139	+	.	.
scaffold43210	subtractBed	intrn	37469	37499	.	+	.	Parent=CGI_10009440;
	scaffold43210	TRF	Tandem_Repeat	37469	37499	62	+	.	.
scaffold43210	subtractBed	intrn	44927	45008	.	+	.	Parent=CGI_10009440;
	scaffold43210	TRF	Tandem_Repeat	44927	45008	62	+	.	.
scaffold43210	subtractBed	intrn	50422	50488	.	+	.	Parent=CGI_10009440;
	scaffold43210	TRF	Tandem_Repeat	50422	50488	116	+	.	.
scaffold43210	subtractBed	intrn	68794	68834	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	68794	68834	82	+	.	.
scaffold43210	subtractBed	intrn	71134	71165	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	71134	71165	55	+	.	.
scaffold43210	subtractBed	intrn	71863	71914	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	71863	71914	104	+	.	.
scaffold43210	subtractBed	intrn	71914	71943	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	71914	71943	60	+	.	.
scaffold43210	subtractBed	intrn	72297	72357	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	72297	72357	79	+	.	.
scaffold43210	subtractBed	intrn	73087	73123	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	73087	73123	74	+	.	.
scaffold43210	subtractBed	intrn	76859	76927	.	+	.	Parent=CGI_10009441;
	scaffold43210	TRF	Tandem_Repeat	76859	76927	88	+	.	.
scaffold43210	subtractBed	intrn	87403	87475	.	-	.	Parent=CGI_10009442;
	scaffold43210	TRF	Tandem_Repeat	87403	87475	56	+	.	.
scaffold43210	subtractBed	intrn	99314	99379	.	-	.	Parent=CGI_10009442;
	scaffold43210	TRF	Tandem_Repeat	99314	99379	132	+	.	.
scaffold43210	subtractBed	intrn	100264	100297	.	-	.	Parent=CGI_10009442;
	scaffold43210	TRF	Tandem_Repeat	100264	100297	68	+	.	.
scaffold43210	subtractBed	intrn	110758	110976	.	-	.	Parent=CGI_10009443;
	scaffold43210	TRF	Tandem_Repeat	110758	110976	321	+	.	.
scaffold43210	subtractBed	intrn	112105	112168	.	-	.	Parent=CGI_10009443;
	scaffold43210	TRF	Tandem_Repeat	112105	112168	85	+	.	.
scaffold43210	subtractBed	intrn	139959	140217	.	-	.	Parent=CGI_10009445;
	scaffold43210	TRF	Tandem_Repeat	139959	140217	452	+	.	.
scaffold43210	subtractBed	intrn	155139	155167	.	+	.	Parent=CGI_10009446;
	scaffold43210	TRF	Tandem_Repeat	155139	155167	51	+	.	.
scaffold43210	subtractBed	intrn	155653	155689	.	+	.	Parent=CGI_10009446;
	scaffold43210	TRF	Tandem_Repeat	155653	155689	74	+	.	.
scaffold43210	subtractBed	intrn	183870	183870	.	-	.	Parent=CGI_10009448;
	scaffold43210	WUBlastX	LINE_RTE-BovB	183870	184007	70	-	.	.
scaffold43210	subtractBed	intrn	190936	191289	.	-	.	Parent=CGI_10009448;
	scaffold43210	WUBlastX	DNA_TcMar-Tc1	190936	191289	186	+	.	.
scaffold43210	subtractBed	intrn	191253	191687	.	-	.	Parent=CGI_10009448;
	scaffold43210	WUBlastX	DNA_TcMar-Tc1	191253	191687	191	+	.	.
scaffold43210	subtractBed	intrn	190706	190918	.	-	.	Parent=CGI_10009448;
	scaffold43210	WUBlastX	DNA_TcMar-Tc1	190706	190918	53	+	.	.
scaffold43240	subtractBed	intrn	144416	144853	.	-	.	Parent=CGI_10009590;
	scaffold43240	TRF	Tandem_Repeat	144416	144853	563	+	.	.
scaffold43240	subtractBed	intrn	146811	146896	.	-	.	Parent=CGI_10009590;
	scaffold43240	TRF	Tandem_Repeat	146811	146896	118	+	.	.
scaffold43240	subtractBed	intrn	153005	153069	.	-	.	Parent=CGI_10009591;
	scaffold43240	TRF	Tandem_Repeat	153005	153069	130	+	.	.
scaffold43240	subtractBed	intrn	167586	167616	.	+	.	Parent=CGI_10009593;
	scaffold43240	TRF	Tandem_Repeat	167586	167616	53	+	.	.
scaffold43240	subtractBed	intrn	178146	178172	.	-	.	Parent=CGI_10009594;
	scaffold43240	TRF	Tandem_Repeat	178146	178172	54	+	.	.
scaffold43240	subtractBed	intrn	189737	189779	.	-	.	Parent=CGI_10009594;
	scaffold43240	TRF	Tandem_Repeat	189737	189779	59	+	.	.
scaffold43240	subtractBed	intrn	189733	189767	.	-	.	Parent=CGI_10009594;
	scaffold43240	TRF	Tandem_Repeat	189733	189767	52	+	.	.
scaffold43240	subtractBed	intrn	202805	203249	.	-	.	Parent=CGI_10009594;
	scaffold43240	TRF	Tandem_Repeat	202797	203249	672	+	.	.
scaffold43240	subtractBed	intrn	202805	203249	.	+	.	Parent=CGI_10009595;
	scaffold43240	TRF	Tandem_Repeat	202797	203249	672	+	.	.
scaffold43240	subtractBed	intrn	215190	215220	.	+	.	Parent=CGI_10009595;
	scaffold43240	TRF	Tandem_Repeat	215190	215220	53	+	.	.
scaffold43242	subtractBed	intrn	28617	28769	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_TcMar-Tc1	28617	28769	50	+	.	.
scaffold43242	subtractBed	intrn	28617	28739	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_TcMar-Tc1	28617	28739	58	+	.	.
scaffold43242	subtractBed	intrn	28123	28272	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_TcMar-Tc1	28123	28272	31	+	.	.
scaffold43242	subtractBed	intrn	28909	29196	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_TcMar-Tc1	28909	29196	152	+	.	.
scaffold43242	subtractBed	intrn	28186	28353	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_TcMar-Tc1	28186	28353	33	+	.	.
scaffold43242	subtractBed	intrn	31699	32037	.	+	.	Parent=CGI_10009544;
	scaffold43242	TRF	Tandem_Repeat	31699	32037	237	+	.	.
scaffold43242	subtractBed	intrn	31686	32046	.	+	.	Parent=CGI_10009544;
	scaffold43242	TRF	Tandem_Repeat	31686	32046	555	+	.	.
scaffold43242	subtractBed	intrn	33111	33308	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_Kolobok	33111	33308	57	+	.	.
scaffold43242	subtractBed	intrn	32583	32792	.	+	.	Parent=CGI_10009544;
	scaffold43242	WUBlastX	DNA_Kolobok	32583	32792	82	+	.	.
scaffold43242	subtractBed	intrn	154963	154966	.	+	.	Parent=CGI_10009546;
	scaffold43242	WUBlastX	DNA_TcMar-Fot1	154963	155022	28	+	.	.
scaffold43242	subtractBed	intrn	155011	155022	.	+	.	Parent=CGI_10009546;
	scaffold43242	WUBlastX	DNA_TcMar-Fot1	154963	155022	28	+	.	.
scaffold43242	subtractBed	intrn	155202	155405	.	+	.	Parent=CGI_10009546;
	scaffold43242	WUBlastX	DNA_TcMar-Tc2	155202	155405	93	+	.	.
scaffold43242	subtractBed	intrn	158205	158258	.	-	.	Parent=CGI_10009547;
	scaffold43242	TRF	Tandem_Repeat	158205	158258	54	+	.	.
scaffold43242	subtractBed	intrn	158428	160230	.	-	.	Parent=CGI_10009547;
	scaffold43242	TRF	Tandem_Repeat	158428	160230	2993	+	.	.
scaffold43242	subtractBed	intrn	175191	175227	.	+	.	Parent=CGI_10009550;
	scaffold43242	TRF	Tandem_Repeat	175191	175227	74	+	.	.
scaffold43242	subtractBed	intrn	181634	181666	.	+	.	Parent=CGI_10009551;
	scaffold43242	TRF	Tandem_Repeat	181634	181666	57	+	.	.
scaffold43242	subtractBed	intrn	219471	219516	.	+	.	Parent=CGI_10009555;
	scaffold43242	TRF	Tandem_Repeat	219471	219516	92	+	.	.
scaffold43244	subtractBed	intrn	106469	106500	.	-	.	Parent=CGI_10009612;
	scaffold43244	TRF	Tandem_Repeat	106469	106500	64	+	.	.
scaffold43244	subtractBed	intrn	106556	106587	.	-	.	Parent=CGI_10009612;
	scaffold43244	TRF	Tandem_Repeat	106556	106587	64	+	.	.
scaffold43244	subtractBed	intrn	111818	111903	.	-	.	Parent=CGI_10009612;
	scaffold43244	TRF	Tandem_Repeat	111818	111903	64	+	.	.
scaffold43244	subtractBed	intrn	191609	191678	.	-	.	Parent=CGI_10009616;
	scaffold43244	TRF	Tandem_Repeat	191609	191678	113	+	.	.
scaffold43244	subtractBed	intrn	198294	198342	.	-	.	Parent=CGI_10009616;
	scaffold43244	TRF	Tandem_Repeat	198294	198342	71	+	.	.
scaffold43244	subtractBed	intrn	200398	200451	.	-	.	Parent=CGI_10009616;
	scaffold43244	TRF	Tandem_Repeat	200398	200451	108	+	.	.
scaffold43244	subtractBed	intrn	213966	214325	.	-	.	Parent=CGI_10009617;
	scaffold43244	WUBlastX	RC_Helitron	213966	214325	122	-	.	.
scaffold43258	subtractBed	intrn	24611	24644	.	-	.	Parent=CGI_10009628;
	scaffold43258	TRF	Tandem_Repeat	24611	24644	50	+	.	.
scaffold43258	subtractBed	intrn	25026	25081	.	-	.	Parent=CGI_10009628;
	scaffold43258	TRF	Tandem_Repeat	25026	25081	112	+	.	.
scaffold43258	subtractBed	intrn	93144	93227	.	+	.	Parent=CGI_10009633;
	scaffold43258	WUBlastX	DNA_TcMar-Marin	93144	93227	28	-	.	.
scaffold43258	subtractBed	intrn	93359	93922	.	+	.	Parent=CGI_10009633;
	scaffold43258	WUBlastX	DNA_TcMar-Marin	93359	93922	64	-	.	.
scaffold43258	subtractBed	intrn	93181	93309	.	+	.	Parent=CGI_10009633;
	scaffold43258	WUBlastX	DNA_TcMar-Marin	93181	93309	42	-	.	.
scaffold43258	subtractBed	intrn	111526	111621	.	+	.	Parent=CGI_10009633;
	scaffold43258	TRF	Tandem_Repeat	111526	111621	120	+	.	.
scaffold43258	subtractBed	intrn	111828	111946	.	+	.	Parent=CGI_10009633;
	scaffold43258	TRF	Tandem_Repeat	111828	111946	132	+	.	.
scaffold43258	subtractBed	intrn	118035	118076	.	+	.	Parent=CGI_10009633;
	scaffold43258	TRF	Tandem_Repeat	118035	118076	52	+	.	.
scaffold43258	subtractBed	intrn	142300	142494	.	+	.	Parent=CGI_10009634;
	scaffold43258	WUBlastX	LINE_RTE-X	142300	142494	20	-	.	.
scaffold43258	subtractBed	intrn	143111	143446	.	+	.	Parent=CGI_10009634;
	scaffold43258	WUBlastX	LINE_RTE-X	143111	143446	57	-	.	.
scaffold43258	subtractBed	intrn	142825	143166	.	+	.	Parent=CGI_10009634;
	scaffold43258	WUBlastX	LINE_RTE-X	142825	143166	58	-	.	.
scaffold43258	subtractBed	intrn	143512	143784	.	+	.	Parent=CGI_10009634;
	scaffold43258	WUBlastX	LINE_RTE-X	143512	143784	56	-	.	.
scaffold43258	subtractBed	intrn	144430	144669	.	+	.	Parent=CGI_10009634;
	scaffold43258	WUBlastX	LINE_L2	144430	144669	31	-	.	.
scaffold43258	subtractBed	intrn	204132	204421	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	204132	204421	436	+	.	.
scaffold43258	subtractBed	intrn	206847	207128	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	206847	207128	363	+	.	.
scaffold43258	subtractBed	intrn	209934	210356	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	209934	210356	641	+	.	.
scaffold43258	subtractBed	intrn	209934	210359	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	209934	210359	635	+	.	.
scaffold43258	subtractBed	intrn	215484	215817	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	215484	215817	560	+	.	.
scaffold43258	subtractBed	intrn	220600	221069	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	220600	221069	467	+	.	.
scaffold43258	subtractBed	intrn	227025	227431	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	227025	227431	570	+	.	.
scaffold43258	subtractBed	intrn	227026	227431	.	+	.	Parent=CGI_10009635;
	scaffold43258	TRF	Tandem_Repeat	227026	227431	531	+	.	.
scaffold43272	subtractBed	intrn	12980	13018	.	-	.	Parent=CGI_10009660;
	scaffold43272	TRF	Tandem_Repeat	12980	13018	71	+	.	.
scaffold43272	subtractBed	intrn	13072	13116	.	-	.	Parent=CGI_10009660;
	scaffold43272	TRF	Tandem_Repeat	13072	13116	90	+	.	.
scaffold43272	subtractBed	intrn	19041	19238	.	-	.	Parent=CGI_10009660;
	scaffold43272	TRF	Tandem_Repeat	19041	19238	184	+	.	.
scaffold43272	subtractBed	intrn	12980	13018	.	+	.	Parent=CGI_10009661;
	scaffold43272	TRF	Tandem_Repeat	12980	13018	71	+	.	.
scaffold43272	subtractBed	intrn	13072	13116	.	+	.	Parent=CGI_10009661;
	scaffold43272	TRF	Tandem_Repeat	13072	13116	90	+	.	.
scaffold43272	subtractBed	intrn	19041	19238	.	+	.	Parent=CGI_10009661;
	scaffold43272	TRF	Tandem_Repeat	19041	19238	184	+	.	.
scaffold43272	subtractBed	intrn	50785	50873	.	-	.	Parent=CGI_10009663;
	scaffold43272	TRF	Tandem_Repeat	50785	50873	110	+	.	.
scaffold43272	subtractBed	intrn	54139	54242	.	-	.	Parent=CGI_10009663;
	scaffold43272	TRF	Tandem_Repeat	54139	54242	174	+	.	.
scaffold43272	subtractBed	intrn	76837	76892	.	+	.	Parent=CGI_10009665;
	scaffold43272	TRF	Tandem_Repeat	76837	76892	103	+	.	.
scaffold43272	subtractBed	intrn	78860	78884	.	+	.	Parent=CGI_10009665;
	scaffold43272	TRF	Tandem_Repeat	78860	78884	50	+	.	.
scaffold43272	subtractBed	intrn	114952	114952	.	-	.	Parent=CGI_10009668;
	scaffold43272	WUBlastX	DNA_Kolobok	114952	115125	61	-	.	.
scaffold43272	subtractBed	intrn	114867	114928	.	-	.	Parent=CGI_10009668;
	scaffold43272	WUBlastX	DNA_Kolobok	114770	114928	25	-	.	.
scaffold43272	subtractBed	intrn	114867	114868	.	-	.	Parent=CGI_10009668;
	scaffold43272	WUBlastX	DNA_Kolobok	114713	114868	51	-	.	.
scaffold43272	subtractBed	intrn	115444	115474	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_Kolobok	115214	115474	75	-	.	.
scaffold43272	subtractBed	intrn	115444	115468	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_Kolobok	115271	115468	78	-	.	.
scaffold43272	subtractBed	intrn	116697	117494	.	-	.	Parent=CGI_10009669;
	scaffold43272	TRF	Tandem_Repeat	116697	117494	1138	+	.	.
scaffold43272	subtractBed	intrn	121246	121530	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_hAT-Tip100	121246	121530	56	+	.	.
scaffold43272	subtractBed	intrn	119926	120243	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	LTR_Gypsy	119926	120243	64	+	.	.
scaffold43272	subtractBed	intrn	119644	119844	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	LTR_Gypsy-Cigr	119644	119844	102	-	.	.
scaffold43272	subtractBed	intrn	115647	115781	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_Kolobok	115647	115781	81	-	.	.
scaffold43272	subtractBed	intrn	119557	119838	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	LTR_Gypsy	119557	119838	75	-	.	.
scaffold43272	subtractBed	intrn	119866	120177	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	LTR_Gypsy	119866	120177	206	+	.	.
scaffold43272	subtractBed	intrn	118721	118927	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_Kolobok	118721	118927	69	-	.	.
scaffold43272	subtractBed	intrn	115643	115754	.	-	.	Parent=CGI_10009669;
	scaffold43272	WUBlastX	DNA_Kolobok	115626	115754	24	-	.	.
scaffold43272	subtractBed	intrn	127662	127695	.	-	.	Parent=CGI_10009669;
	scaffold43272	TRF	Tandem_Repeat	127662	127695	59	+	.	.
scaffold43278	subtractBed	intrn	92762	92810	.	+	.	Parent=CGI_10009621;
	scaffold43278	TRF	Tandem_Repeat	92762	92810	55	+	.	.
scaffold43278	subtractBed	intrn	122588	122870	.	+	.	Parent=CGI_10009622;
	scaffold43278	TRF	Tandem_Repeat	122588	122870	338	+	.	.
scaffold43278	subtractBed	intrn	126457	126519	.	+	.	Parent=CGI_10009622;
	scaffold43278	TRF	Tandem_Repeat	126457	126519	126	+	.	.
scaffold43278	subtractBed	intrn	186819	186863	.	+	.	Parent=CGI_10009624;
	scaffold43278	TRF	Tandem_Repeat	186819	186863	90	+	.	.
scaffold43278	subtractBed	intrn	194312	194364	.	+	.	Parent=CGI_10009624;
	scaffold43278	TRF	Tandem_Repeat	194312	194364	106	+	.	.
scaffold43278	subtractBed	intrn	204626	205337	.	+	.	Parent=CGI_10009624;
	scaffold43278	TRF	Tandem_Repeat	204626	205337	1074	+	.	.
scaffold43280	subtractBed	intrn	28276	28286	.	-	.	Parent=CGI_10009653;
	scaffold43280	WUBlastX	DNA_Sola	28276	28638	78	-	.	.
scaffold43280	subtractBed	intrn	28638	28638	.	-	.	Parent=CGI_10009653;
	scaffold43280	WUBlastX	DNA_Sola	28276	28638	78	-	.	.
scaffold43280	subtractBed	intrn	28669	28721	.	-	.	Parent=CGI_10009653;
	scaffold43280	WUBlastX	DNA_Sola	28669	29022	62	-	.	.
scaffold43280	subtractBed	intrn	29195	29197	.	-	.	Parent=CGI_10009653;
	scaffold43280	WUBlastX	DNA_Sola	29195	29470	22	-	.	.
scaffold43280	subtractBed	intrn	111710	112285	.	+	.	Parent=CGI_10009655;
	scaffold43280	WUBlastX	LINE_L1-Tx1	111710	112285	127	-	.	.
scaffold43280	subtractBed	intrn	111683	112192	.	+	.	Parent=CGI_10009655;
	scaffold43280	WUBlastX	LINE_L1-Tx1	111683	112192	253	-	.	.
scaffold43280	subtractBed	intrn	137193	138406	.	-	.	Parent=CGI_10009657;
	scaffold43280	TRF	Tandem_Repeat	137193	138406	1616	+	.	.
scaffold43280	subtractBed	intrn	165592	165627	.	-	.	Parent=CGI_10009657;
	scaffold43280	TRF	Tandem_Repeat	165592	165627	54	+	.	.
scaffold43280	subtractBed	intrn	168118	168300	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	168118	168300	31	+	.	.
scaffold43280	subtractBed	intrn	170155	170316	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	170155	170316	39	+	.	.
scaffold43280	subtractBed	intrn	167586	168119	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	167586	168119	287	+	.	.
scaffold43280	subtractBed	intrn	168359	168928	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	168359	168928	257	+	.	.
scaffold43280	subtractBed	intrn	168939	169742	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	168939	169742	564	+	.	.
scaffold43280	subtractBed	intrn	170155	170280	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	170155	170280	57	+	.	.
scaffold43280	subtractBed	intrn	170807	170974	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	170807	170974	60	+	.	.
scaffold43280	subtractBed	intrn	170837	171073	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	170837	171073	21	+	.	.
scaffold43280	subtractBed	intrn	170840	170974	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	170840	170974	67	+	.	.
scaffold43280	subtractBed	intrn	168040	168201	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	168040	168201	52	+	.	.
scaffold43280	subtractBed	intrn	169721	170158	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	169721	170158	226	+	.	.
scaffold43280	subtractBed	intrn	167479	167622	.	-	.	Parent=CGI_10009657;
	scaffold43280	WUBlastX	LTR_Gypsy	167479	167622	46	+	.	.
scaffold43280	subtractBed	intrn	183754	183806	.	-	.	Parent=CGI_10009658;
	scaffold43280	TRF	Tandem_Repeat	183754	183806	88	+	.	.
scaffold43280	subtractBed	intrn	187754	187815	.	-	.	Parent=CGI_10009658;
	scaffold43280	TRF	Tandem_Repeat	187754	187815	88	+	.	.
scaffold43290	subtractBed	intrn	18699	19217	.	-	.	Parent=CGI_10009638;
	scaffold43290	TRF	Tandem_Repeat	18699	19217	440	+	.	.
scaffold43290	subtractBed	intrn	18697	19090	.	-	.	Parent=CGI_10009638;
	scaffold43290	TRF	Tandem_Repeat	18697	19090	382	+	.	.
scaffold43290	subtractBed	intrn	18697	19217	.	-	.	Parent=CGI_10009638;
	scaffold43290	TRF	Tandem_Repeat	18697	19217	381	+	.	.
scaffold43290	subtractBed	intrn	37481	37523	.	-	.	Parent=CGI_10009638;
	scaffold43290	TRF	Tandem_Repeat	37481	37523	86	+	.	.
scaffold43290	subtractBed	intrn	112724	113269	.	-	.	Parent=CGI_10009641;
	scaffold43290	TRF	Tandem_Repeat	112724	113269	660	+	.	.
scaffold43290	subtractBed	intrn	124153	124325	.	-	.	Parent=CGI_10009641;
	scaffold43290	TRF	Tandem_Repeat	124153	124325	249	+	.	.
scaffold43290	subtractBed	intrn	208532	208663	.	+	.	Parent=CGI_10009648;
	scaffold43290	WUBlastX	LINE_L2	208532	208663	42	+	.	.
scaffold43290	subtractBed	intrn	208678	209751	.	+	.	Parent=CGI_10009648;
	scaffold43290	WUBlastX	LINE_L2	208678	209751	512	+	.	.
scaffold43290	subtractBed	intrn	216980	217030	.	-	.	Parent=CGI_10009649;
	scaffold43290	TRF	Tandem_Repeat	216980	217030	79	+	.	.
scaffold43290	subtractBed	intrn	216993	217059	.	-	.	Parent=CGI_10009649;
	scaffold43290	TRF	Tandem_Repeat	216993	217059	68	+	.	.
scaffold43290	subtractBed	intrn	216980	217059	.	-	.	Parent=CGI_10009649;
	scaffold43290	TRF	Tandem_Repeat	216980	217059	80	+	.	.
scaffold43290	subtractBed	intrn	217599	217784	.	-	.	Parent=CGI_10009649;
	scaffold43290	TRF	Tandem_Repeat	217599	217784	252	+	.	.
scaffold43290	subtractBed	intrn	219282	219342	.	-	.	Parent=CGI_10009649;
	scaffold43290	TRF	Tandem_Repeat	219282	219342	122	+	.	.
scaffold43290	subtractBed	intrn	233032	233131	.	+	.	Parent=CGI_10009650;
	scaffold43290	TRF	Tandem_Repeat	233032	233131	155	+	.	.
scaffold43296	subtractBed	intrn	52288	52344	.	+	.	Parent=CGI_10009741;
	scaffold43296	TRF	Tandem_Repeat	52288	52344	114	+	.	.
scaffold43296	subtractBed	intrn	109327	109378	.	-	.	Parent=CGI_10009743;
	scaffold43296	TRF	Tandem_Repeat	109327	109378	104	+	.	.
scaffold43296	subtractBed	intrn	120330	120479	.	-	.	Parent=CGI_10009743;
	scaffold43296	TRF	Tandem_Repeat	120330	120479	205	+	.	.
scaffold43296	subtractBed	intrn	149493	149742	.	+	.	Parent=CGI_10009745;
	scaffold43296	TRF	Tandem_Repeat	149493	149742	263	+	.	.
scaffold43296	subtractBed	intrn	152977	153037	.	+	.	Parent=CGI_10009745;
	scaffold43296	TRF	Tandem_Repeat	152977	153037	122	+	.	.
scaffold43296	subtractBed	intrn	164216	164277	.	+	.	Parent=CGI_10009745;
	scaffold43296	TRF	Tandem_Repeat	164216	164277	117	+	.	.
scaffold43296	subtractBed	intrn	217100	217130	.	-	.	Parent=CGI_10009746;
	scaffold43296	TRF	Tandem_Repeat	217100	217130	62	+	.	.
scaffold433	subtractBed	intrn	31005	31049	.	-	.	Parent=CGI_10027044;
	scaffold433	TRF	Tandem_Repeat	31005	31049	90	+	.	.
scaffold433	subtractBed	intrn	60278	60316	.	+	.	Parent=CGI_10027047;
	scaffold433	TRF	Tandem_Repeat	60278	60316	78	+	.	.
scaffold433	subtractBed	intrn	67236	67285	.	-	.	Parent=CGI_10027048;
	scaffold433	TRF	Tandem_Repeat	67236	67285	50	+	.	.
scaffold433	subtractBed	intrn	114689	114781	.	+	.	Parent=CGI_10027055;
	scaffold433	TRF	Tandem_Repeat	114689	114781	161	+	.	.
scaffold433	subtractBed	intrn	131203	131245	.	+	.	Parent=CGI_10027057;
	scaffold433	TRF	Tandem_Repeat	131203	131245	68	+	.	.
scaffold433	subtractBed	intrn	131201	131265	.	+	.	Parent=CGI_10027057;
	scaffold433	TRF	Tandem_Repeat	131201	131265	67	+	.	.
scaffold433	subtractBed	intrn	138275	138324	.	+	.	Parent=CGI_10027057;
	scaffold433	TRF	Tandem_Repeat	138275	138324	55	+	.	.
scaffold433	subtractBed	intrn	138348	139132	.	+	.	Parent=CGI_10027057;
	scaffold433	TRF	Tandem_Repeat	138348	139132	997	+	.	.
scaffold433	subtractBed	intrn	206897	206934	.	+	.	Parent=CGI_10027060;
	scaffold433	TRF	Tandem_Repeat	206897	206934	76	+	.	.
scaffold433	subtractBed	intrn	208519	208559	.	+	.	Parent=CGI_10027060;
	scaffold433	TRF	Tandem_Repeat	208519	208559	82	+	.	.
scaffold433	subtractBed	intrn	224746	224781	.	+	.	Parent=CGI_10027060;
	scaffold433	TRF	Tandem_Repeat	224746	224781	72	+	.	.
scaffold433	subtractBed	intrn	224779	224819	.	+	.	Parent=CGI_10027060;
	scaffold433	TRF	Tandem_Repeat	224779	224819	82	+	.	.
scaffold433	subtractBed	intrn	292578	292668	.	+	.	Parent=CGI_10027061;
	scaffold433	TRF	Tandem_Repeat	292578	292668	69	+	.	.
scaffold433	subtractBed	intrn	300022	300076	.	+	.	Parent=CGI_10027062;
	scaffold433	TRF	Tandem_Repeat	300022	300076	60	+	.	.
scaffold433	subtractBed	intrn	301491	301542	.	+	.	Parent=CGI_10027062;
	scaffold433	TRF	Tandem_Repeat	301491	301542	104	+	.	.
scaffold433	subtractBed	intrn	309718	310719	.	+	.	Parent=CGI_10027062;
	scaffold433	WUBlastX	DNA_TcMar-Tc1	309718	310719	424	+	.	.
scaffold433	subtractBed	intrn	317651	318013	.	+	.	Parent=CGI_10027063;
	scaffold433	WUBlastX	LTR_DIRS	317651	318013	25	-	.	.
scaffold433	subtractBed	intrn	333044	333075	.	+	.	Parent=CGI_10027064;
	scaffold433	TRF	Tandem_Repeat	333044	333075	50	+	.	.
scaffold433	subtractBed	intrn	336644	336676	.	+	.	Parent=CGI_10027064;
	scaffold433	TRF	Tandem_Repeat	336644	336676	57	+	.	.
scaffold433	subtractBed	intrn	337600	338319	.	+	.	Parent=CGI_10027064;
	scaffold433	WUBlastX	LTR_Ngaro	337600	338319	242	+	.	.
scaffold433	subtractBed	intrn	337705	338550	.	+	.	Parent=CGI_10027064;
	scaffold433	WUBlastX	LTR_Ngaro	337705	338550	107	+	.	.
scaffold433	subtractBed	intrn	338540	339715	.	+	.	Parent=CGI_10027064;
	scaffold433	WUBlastX	LTR_Ngaro	338540	339715	821	+	.	.
scaffold433	subtractBed	intrn	392302	392338	.	+	.	Parent=CGI_10027066;
	scaffold433	TRF	Tandem_Repeat	392302	392338	74	+	.	.
scaffold433	subtractBed	intrn	395517	395564	.	+	.	Parent=CGI_10027067;
	scaffold433	TRF	Tandem_Repeat	395517	395564	52	+	.	.
scaffold433	subtractBed	intrn	401029	401072	.	+	.	Parent=CGI_10027067;
	scaffold433	TRF	Tandem_Repeat	401029	401072	52	+	.	.
scaffold433	subtractBed	intrn	407737	408177	.	+	.	Parent=CGI_10027068;
	scaffold433	WUBlastX	DNA_P	407737	408177	25	-	.	.
scaffold433	subtractBed	intrn	407836	408825	.	+	.	Parent=CGI_10027068;
	scaffold433	WUBlastX	DNA_P	407836	408825	565	-	.	.
scaffold433	subtractBed	intrn	408795	409760	.	+	.	Parent=CGI_10027068;
	scaffold433	WUBlastX	DNA_P	408795	409760	332	-	.	.
scaffold433	subtractBed	intrn	408795	409943	.	+	.	Parent=CGI_10027068;
	scaffold433	WUBlastX	DNA_P	408795	409943	265	-	.	.
scaffold433	subtractBed	intrn	414001	414066	.	+	.	Parent=CGI_10027068;
	scaffold433	WUBlastX	LINE_L1-Tx1	414001	414066	20	+	.	.
scaffold433	subtractBed	intrn	420821	420882	.	+	.	Parent=CGI_10027068;
	scaffold433	TRF	Tandem_Repeat	420821	420882	67	+	.	.
scaffold433	subtractBed	intrn	443427	443465	.	+	.	Parent=CGI_10027073;
	scaffold433	TRF	Tandem_Repeat	443427	443465	78	+	.	.
scaffold433	subtractBed	intrn	443512	443563	.	+	.	Parent=CGI_10027073;
	scaffold433	TRF	Tandem_Repeat	443512	443563	104	+	.	.
scaffold433	subtractBed	intrn	460153	460244	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	460153	460244	175	+	.	.
scaffold433	subtractBed	intrn	463416	464051	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	463416	464051	629	+	.	.
scaffold433	subtractBed	intrn	463416	464033	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	463416	464033	679	+	.	.
scaffold433	subtractBed	intrn	466182	466574	.	+	.	Parent=CGI_10027074;
	scaffold433	WUBlastX	LINE_RTE-X	466182	466574	29	+	.	.
scaffold433	subtractBed	intrn	470031	470069	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	470031	470069	78	+	.	.
scaffold433	subtractBed	intrn	470069	470107	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	470069	470107	78	+	.	.
scaffold433	subtractBed	intrn	471188	471254	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	471188	471254	54	+	.	.
scaffold433	subtractBed	intrn	472194	472240	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	472194	472240	94	+	.	.
scaffold433	subtractBed	intrn	472503	472550	.	+	.	Parent=CGI_10027074;
	scaffold433	TRF	Tandem_Repeat	472503	472550	96	+	.	.
scaffold433	subtractBed	intrn	487495	488233	.	+	.	Parent=CGI_10027077;
	scaffold433	TRF	Tandem_Repeat	487472	488233	1362	+	.	.
scaffold433	subtractBed	intrn	489743	490276	.	+	.	Parent=CGI_10027077;
	scaffold433	TRF	Tandem_Repeat	489743	490276	915	+	.	.
scaffold433	subtractBed	intrn	546160	546193	.	-	.	Parent=CGI_10027080;
	scaffold433	TRF	Tandem_Repeat	546160	546193	68	+	.	.
scaffold433	subtractBed	intrn	551207	551252	.	-	.	Parent=CGI_10027080;
	scaffold433	TRF	Tandem_Repeat	551207	551252	85	+	.	.
scaffold433	subtractBed	intrn	598886	598912	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	598886	598912	54	+	.	.
scaffold433	subtractBed	intrn	611776	611899	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	611758	611899	230	+	.	.
scaffold433	subtractBed	intrn	614908	616084	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	614900	616084	2028	+	.	.
scaffold433	subtractBed	intrn	626397	628878	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	626397	628878	3875	+	.	.
scaffold433	subtractBed	intrn	626397	628878	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	626397	628878	3658	+	.	.
scaffold433	subtractBed	intrn	626397	628878	.	+	.	Parent=CGI_10027082;
	scaffold433	TRF	Tandem_Repeat	626397	628878	3732	+	.	.
scaffold433	subtractBed	intrn	681889	682676	.	-	.	Parent=CGI_10027087;
	scaffold433	TRF	Tandem_Repeat	681889	682676	625	+	.	.
scaffold433	subtractBed	intrn	812260	812619	.	+	.	Parent=CGI_10027093;
	scaffold433	WUBlastX	LINE_RTE-X	812260	812619	89	+	.	.
scaffold433	subtractBed	intrn	811896	812219	.	+	.	Parent=CGI_10027093;
	scaffold433	WUBlastX	LINE_RTE-X	811896	812219	162	+	.	.
scaffold433	subtractBed	intrn	847479	847520	.	+	.	Parent=CGI_10027096;
	scaffold433	TRF	Tandem_Repeat	847479	847520	77	+	.	.
scaffold433	subtractBed	intrn	876145	876940	.	+	.	Parent=CGI_10027098;
	scaffold433	TRF	Tandem_Repeat	876145	876940	1402	+	.	.
scaffold433	subtractBed	intrn	878119	879457	.	+	.	Parent=CGI_10027098;
	scaffold433	TRF	Tandem_Repeat	878119	879457	1799	+	.	.
scaffold433	subtractBed	intrn	889343	889486	.	+	.	Parent=CGI_10027099;
	scaffold433	WUBlastX	LINE_R2-Hero	889343	889486	55	+	.	.
scaffold433	subtractBed	intrn	889492	889569	.	+	.	Parent=CGI_10027099;
	scaffold433	WUBlastX	LINE_R2-Hero	889492	889569	21	+	.	.
scaffold433	subtractBed	intrn	972505	972566	.	+	.	Parent=CGI_10027101;
	scaffold433	TRF	Tandem_Repeat	972505	972566	124	+	.	.
scaffold433	subtractBed	intrn	973053	973177	.	+	.	Parent=CGI_10027101;
	scaffold433	TRF	Tandem_Repeat	973053	973177	178	+	.	.
scaffold433	subtractBed	intrn	994409	994515	.	+	.	Parent=CGI_10027101;
	scaffold433	TRF	Tandem_Repeat	994409	994515	142	+	.	.
scaffold433	subtractBed	intrn	996058	996148	.	+	.	Parent=CGI_10027101;
	scaffold433	TRF	Tandem_Repeat	996058	996148	137	+	.	.
scaffold433	subtractBed	intrn	997167	997400	.	+	.	Parent=CGI_10027101;
	scaffold433	TRF	Tandem_Repeat	997126	997400	487	+	.	.
scaffold433	subtractBed	intrn	1015593	1016106	.	-	.	Parent=CGI_10027104;
	scaffold433	TRF	Tandem_Repeat	1015593	1016106	949	+	.	.
scaffold433	subtractBed	intrn	1114637	1114900	.	+	.	Parent=CGI_10027108;
	scaffold433	TRF	Tandem_Repeat	1114637	1114900	415	+	.	.
scaffold433	subtractBed	intrn	1115187	1115664	.	+	.	Parent=CGI_10027108;
	scaffold433	TRF	Tandem_Repeat	1115187	1115664	545	+	.	.
scaffold433	subtractBed	intrn	1126279	1126338	.	-	.	Parent=CGI_10027109;
	scaffold433	TRF	Tandem_Repeat	1126279	1126338	93	+	.	.
scaffold433	subtractBed	intrn	1153767	1153801	.	-	.	Parent=CGI_10027111;
	scaffold433	TRF	Tandem_Repeat	1153767	1153801	52	+	.	.
scaffold433	subtractBed	intrn	1159905	1159970	.	-	.	Parent=CGI_10027111;
	scaffold433	TRF	Tandem_Repeat	1159905	1159970	73	+	.	.
scaffold433	subtractBed	intrn	1181721	1181775	.	-	.	Parent=CGI_10027114;
	scaffold433	TRF	Tandem_Repeat	1181721	1181775	65	+	.	.
scaffold433	subtractBed	intrn	1181717	1181772	.	-	.	Parent=CGI_10027114;
	scaffold433	TRF	Tandem_Repeat	1181717	1181772	71	+	.	.
scaffold433	subtractBed	intrn	1186288	1186338	.	+	.	Parent=CGI_10027115;
	scaffold433	TRF	Tandem_Repeat	1186288	1186338	84	+	.	.
scaffold433	subtractBed	intrn	1186349	1187044	.	+	.	Parent=CGI_10027115;
	scaffold433	TRF	Tandem_Repeat	1186349	1187044	938	+	.	.
scaffold433	subtractBed	intrn	1184155	1184229	.	+	.	Parent=CGI_10027115;
	scaffold433	WUBlastX	DNA_Kolobok-Hyd	1184155	1184229	26	+	.	.
scaffold433	subtractBed	intrn	1185063	1185257	.	+	.	Parent=CGI_10027115;
	scaffold433	WUBlastX	DNA_Kolobok-Hyd	1185063	1185257	26	+	.	.
scaffold433	subtractBed	intrn	1260426	1260611	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	LTR_DIRS	1260426	1260611	60	-	.	.
scaffold433	subtractBed	intrn	1261618	1262157	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_Maverick	1261618	1262157	254	+	.	.
scaffold433	subtractBed	intrn	1262933	1263718	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_PiggyBac	1262933	1263718	93	-	.	.
scaffold433	subtractBed	intrn	1263332	1263790	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_PiggyBac	1263332	1263790	180	-	.	.
scaffold433	subtractBed	intrn	1261584	1261646	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_Maverick	1261584	1261646	28	+	.	.
scaffold433	subtractBed	intrn	1263149	1263631	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_PiggyBac	1263149	1263631	105	-	.	.
scaffold433	subtractBed	intrn	1263383	1263733	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_PiggyBac	1263383	1263733	199	-	.	.
scaffold433	subtractBed	intrn	1261563	1261664	.	-	.	Parent=CGI_10027122;
	scaffold433	WUBlastX	DNA_Maverick	1261563	1261664	27	+	.	.
scaffold433	subtractBed	intrn	1278000	1278844	.	+	.	Parent=CGI_10027124;
	scaffold433	TRF	Tandem_Repeat	1278000	1278844	1011	+	.	.
scaffold433	subtractBed	intrn	1279377	1279520	.	+	.	Parent=CGI_10027124;
	scaffold433	TRF	Tandem_Repeat	1279377	1279520	116	+	.	.
scaffold43302	subtractBed	intrn	7372	7440	.	-	.	Parent=CGI_10009755;
	scaffold43302	TRF	Tandem_Repeat	7372	7440	138	+	.	.
scaffold43302	subtractBed	intrn	14349	14888	.	-	.	Parent=CGI_10009755;
	scaffold43302	WUBlastX	DNA_IS4EU	14349	14888	61	+	.	.
scaffold43302	subtractBed	intrn	15627	15950	.	-	.	Parent=CGI_10009755;
	scaffold43302	WUBlastX	DNA_Kolobok-IS4	15627	15950	54	+	.	.
scaffold43302	subtractBed	intrn	15684	15950	.	-	.	Parent=CGI_10009755;
	scaffold43302	WUBlastX	DNA_IS4EU	15684	15950	99	+	.	.
scaffold43302	subtractBed	intrn	15401	15583	.	-	.	Parent=CGI_10009755;
	scaffold43302	WUBlastX	DNA_Kolobok-IS4	15401	15583	24	+	.	.
scaffold43302	subtractBed	intrn	15967	16257	.	-	.	Parent=CGI_10009755;
	scaffold43302	WUBlastX	DNA_IS4EU	15967	16257	92	+	.	.
scaffold43302	subtractBed	intrn	21662	21718	.	-	.	Parent=CGI_10009755;
	scaffold43302	TRF	Tandem_Repeat	21662	21718	105	+	.	.
scaffold43302	subtractBed	intrn	22911	23124	.	-	.	Parent=CGI_10009755;
	scaffold43302	TRF	Tandem_Repeat	22911	23124	133	+	.	.
scaffold43302	subtractBed	intrn	22920	23121	.	-	.	Parent=CGI_10009755;
	scaffold43302	TRF	Tandem_Repeat	22920	23121	192	+	.	.
scaffold43302	subtractBed	intrn	57821	58351	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	57821	58351	177	+	.	.
scaffold43302	subtractBed	intrn	59252	59986	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	59252	59986	144	+	.	.
scaffold43302	subtractBed	intrn	59908	60261	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	59908	60261	243	+	.	.
scaffold43302	subtractBed	intrn	59408	59938	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	59408	59938	177	+	.	.
scaffold43302	subtractBed	intrn	59938	60333	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	59938	60333	211	+	.	.
scaffold43302	subtractBed	intrn	60345	60905	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	60345	60905	162	+	.	.
scaffold43302	subtractBed	intrn	57665	58399	.	+	.	Parent=CGI_10009758;
	scaffold43302	WUBlastX	DNA_PiggyBac	57665	58399	144	+	.	.
scaffold43302	subtractBed	intrn	87165	87375	.	+	.	Parent=CGI_10009758;
	scaffold43302	TRF	Tandem_Repeat	87165	87375	146	+	.	.
scaffold43302	subtractBed	intrn	90663	90701	.	+	.	Parent=CGI_10009758;
	scaffold43302	TRF	Tandem_Repeat	90663	90701	69	+	.	.
scaffold43302	subtractBed	intrn	112111	112156	.	+	.	Parent=CGI_10009763;
	scaffold43302	TRF	Tandem_Repeat	112111	112156	92	+	.	.
scaffold43302	subtractBed	intrn	114006	114323	.	+	.	Parent=CGI_10009763;
	scaffold43302	TRF	Tandem_Repeat	114006	114323	129	+	.	.
scaffold43302	subtractBed	intrn	114006	114330	.	+	.	Parent=CGI_10009763;
	scaffold43302	TRF	Tandem_Repeat	114006	114330	74	+	.	.
scaffold43302	subtractBed	intrn	116485	116522	.	+	.	Parent=CGI_10009763;
	scaffold43302	TRF	Tandem_Repeat	116485	116522	76	+	.	.
scaffold43302	subtractBed	intrn	116872	116897	.	+	.	Parent=CGI_10009763;
	scaffold43302	TRF	Tandem_Repeat	116872	116897	52	+	.	.
scaffold43302	subtractBed	intrn	168964	168999	.	-	.	Parent=CGI_10009767;
	scaffold43302	TRF	Tandem_Repeat	168964	168999	72	+	.	.
scaffold43302	subtractBed	intrn	170594	170628	.	-	.	Parent=CGI_10009767;
	scaffold43302	TRF	Tandem_Repeat	170594	170628	54	+	.	.
scaffold43302	subtractBed	intrn	172414	172448	.	-	.	Parent=CGI_10009767;
	scaffold43302	TRF	Tandem_Repeat	172414	172448	54	+	.	.
scaffold43302	subtractBed	intrn	176297	176347	.	-	.	Parent=CGI_10009767;
	scaffold43302	TRF	Tandem_Repeat	176297	176347	102	+	.	.
scaffold43302	subtractBed	intrn	201758	201840	.	+	.	Parent=CGI_10009769;
	scaffold43302	WUBlastX	LTR_Copia	201529	201840	54	+	.	.
scaffold43314	subtractBed	intrn	106797	106847	.	-	.	Parent=CGI_10009783;
	scaffold43314	TRF	Tandem_Repeat	106797	106847	52	+	.	.
scaffold43314	subtractBed	intrn	215117	215162	.	+	.	Parent=CGI_10009786;
	scaffold43314	TRF	Tandem_Repeat	215117	215162	92	+	.	.
scaffold43340	subtractBed	intrn	27288	27322	.	+	.	Parent=CGI_10009921;
	scaffold43340	TRF	Tandem_Repeat	27288	27322	70	+	.	.
scaffold43340	subtractBed	intrn	189651	189676	.	+	.	Parent=CGI_10009930;
	scaffold43340	TRF	Tandem_Repeat	189651	189676	52	+	.	.
scaffold43340	subtractBed	intrn	190244	190277	.	+	.	Parent=CGI_10009930;
	scaffold43340	TRF	Tandem_Repeat	190244	190277	68	+	.	.
scaffold43340	subtractBed	intrn	192001	192070	.	+	.	Parent=CGI_10009930;
	scaffold43340	TRF	Tandem_Repeat	192001	192070	140	+	.	.
scaffold43340	subtractBed	intrn	228836	228892	.	-	.	Parent=CGI_10009933;
	scaffold43340	TRF	Tandem_Repeat	228836	228892	53	+	.	.
scaffold43340	subtractBed	intrn	228745	229014	.	-	.	Parent=CGI_10009933;
	scaffold43340	TRF	Tandem_Repeat	228745	229014	193	+	.	.
scaffold43340	subtractBed	intrn	229085	229198	.	-	.	Parent=CGI_10009933;
	scaffold43340	TRF	Tandem_Repeat	229085	229198	128	+	.	.
scaffold43340	subtractBed	intrn	228968	229249	.	-	.	Parent=CGI_10009933;
	scaffold43340	TRF	Tandem_Repeat	228968	229249	165	+	.	.
scaffold43344	subtractBed	intrn	71467	71505	.	-	.	Parent=CGI_10009833;
	scaffold43344	TRF	Tandem_Repeat	71467	71505	69	+	.	.
scaffold43344	subtractBed	intrn	88768	88797	.	-	.	Parent=CGI_10009836;
	scaffold43344	TRF	Tandem_Repeat	88768	88797	60	+	.	.
scaffold43344	subtractBed	intrn	104762	106058	.	-	.	Parent=CGI_10009837;
	scaffold43344	TRF	Tandem_Repeat	104762	106058	1372	+	.	.
scaffold43344	subtractBed	intrn	146857	146883	.	+	.	Parent=CGI_10009840;
	scaffold43344	TRF	Tandem_Repeat	146857	146883	54	+	.	.
scaffold43344	subtractBed	intrn	193095	193352	.	+	.	Parent=CGI_10009842;
	scaffold43344	TRF	Tandem_Repeat	193095	193352	208	+	.	.
scaffold43358	subtractBed	intrn	14744	15116	.	-	.	Parent=CGI_10009967;
	scaffold43358	TRF	Tandem_Repeat	14744	15116	439	+	.	.
scaffold43358	subtractBed	intrn	73471	73737	.	+	.	Parent=CGI_10009973;
	scaffold43358	TRF	Tandem_Repeat	73471	73737	444	+	.	.
scaffold43358	subtractBed	intrn	92474	92527	.	+	.	Parent=CGI_10009975;
	scaffold43358	TRF	Tandem_Repeat	92474	92527	108	+	.	.
scaffold43358	subtractBed	intrn	102367	102407	.	+	.	Parent=CGI_10009975;
	scaffold43358	TRF	Tandem_Repeat	102367	102407	66	+	.	.
scaffold43358	subtractBed	intrn	133879	134802	.	+	.	Parent=CGI_10009976;
	scaffold43358	WUBlastX	LTR_Gypsy	133879	134802	708	+	.	.
scaffold43358	subtractBed	intrn	133879	134970	.	+	.	Parent=CGI_10009976;
	scaffold43358	WUBlastX	LTR_Gypsy	133879	134970	137	+	.	.
scaffold43358	subtractBed	intrn	169044	169531	.	+	.	Parent=CGI_10009977;
	scaffold43358	TRF	Tandem_Repeat	169044	169531	720	+	.	.
scaffold43358	subtractBed	intrn	205717	205770	.	+	.	Parent=CGI_10009979;
	scaffold43358	TRF	Tandem_Repeat	205717	205770	108	+	.	.
scaffold43358	subtractBed	intrn	219389	219409	.	-	.	Parent=CGI_10009980;
	scaffold43358	WUBlastX	DNA_IS4EU	219389	220018	62	-	.	.
scaffold43364	subtractBed	intrn	212888	212933	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	212888	212933	92	+	.	.
scaffold43364	subtractBed	intrn	214500	214536	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	214500	214536	65	+	.	.
scaffold43364	subtractBed	intrn	215953	216021	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	215953	216021	129	+	.	.
scaffold43364	subtractBed	intrn	222553	222812	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	222553	222812	389	+	.	.
scaffold43364	subtractBed	intrn	222866	222923	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	222866	222923	73	+	.	.
scaffold43364	subtractBed	intrn	222872	222923	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	222872	222923	86	+	.	.
scaffold43364	subtractBed	intrn	224268	225267	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	224268	225267	1287	+	.	.
scaffold43364	subtractBed	intrn	225609	225697	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	225609	225697	97	+	.	.
scaffold43364	subtractBed	intrn	226932	227161	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	226932	227161	308	+	.	.
scaffold43364	subtractBed	intrn	233715	234100	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	233715	234100	108	+	.	.
scaffold43364	subtractBed	intrn	233963	234036	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	233963	234036	60	+	.	.
scaffold43364	subtractBed	intrn	233967	234035	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	233967	234035	52	+	.	.
scaffold43364	subtractBed	intrn	233911	234040	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	233911	234040	77	+	.	.
scaffold43364	subtractBed	intrn	233954	234102	.	+	.	Parent=CGI_10009875;
	scaffold43364	TRF	Tandem_Repeat	233954	234102	89	+	.	.
scaffold43366	subtractBed	intrn	18590	18727	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	18590	18727	123	+	.	.
scaffold43366	subtractBed	intrn	20070	20164	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	20070	20164	111	+	.	.
scaffold43366	subtractBed	intrn	20112	20224	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	20112	20224	66	+	.	.
scaffold43366	subtractBed	intrn	20252	20392	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	20252	20392	97	+	.	.
scaffold43366	subtractBed	intrn	21257	21309	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	21257	21309	106	+	.	.
scaffold43366	subtractBed	intrn	52135	52194	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	52135	52194	120	+	.	.
scaffold43366	subtractBed	intrn	53954	54022	.	+	.	Parent=CGI_10009982;
	scaffold43366	TRF	Tandem_Repeat	53954	54022	138	+	.	.
scaffold43366	subtractBed	intrn	68105	68109	.	+	.	Parent=CGI_10009982;
	scaffold43366	WUBlastX	LINE_RTE-BovB	68105	68272	101	+	.	.
scaffold43366	subtractBed	intrn	161620	161664	.	-	.	Parent=CGI_10009989;
	scaffold43366	TRF	Tandem_Repeat	161620	161664	90	+	.	.
scaffold43366	subtractBed	intrn	204663	204736	.	-	.	Parent=CGI_10009993;
	scaffold43366	TRF	Tandem_Repeat	204663	204736	148	+	.	.
scaffold43366	subtractBed	intrn	204673	204733	.	-	.	Parent=CGI_10009993;
	scaffold43366	TRF	Tandem_Repeat	204673	204733	59	+	.	.
scaffold43366	subtractBed	intrn	208896	208986	.	-	.	Parent=CGI_10009993;
	scaffold43366	TRF	Tandem_Repeat	208896	208986	146	+	.	.
scaffold43366	subtractBed	intrn	208952	209041	.	-	.	Parent=CGI_10009993;
	scaffold43366	TRF	Tandem_Repeat	208952	209041	99	+	.	.
scaffold43366	subtractBed	intrn	210516	210622	.	-	.	Parent=CGI_10009993;
	scaffold43366	TRF	Tandem_Repeat	210516	210622	142	+	.	.
scaffold43388	subtractBed	intrn	33674	33819	.	-	.	Parent=CGI_10010116;
	scaffold43388	TRF	Tandem_Repeat	33674	33819	69	+	.	.
scaffold43388	subtractBed	intrn	35731	35794	.	-	.	Parent=CGI_10010116;
	scaffold43388	TRF	Tandem_Repeat	35731	35794	128	+	.	.
scaffold43388	subtractBed	intrn	63094	63147	.	-	.	Parent=CGI_10010117;
	scaffold43388	TRF	Tandem_Repeat	63094	63147	108	+	.	.
scaffold43388	subtractBed	intrn	211909	211946	.	-	.	Parent=CGI_10010121;
	scaffold43388	TRF	Tandem_Repeat	211909	211946	67	+	.	.
scaffold43388	subtractBed	intrn	212272	212344	.	-	.	Parent=CGI_10010121;
	scaffold43388	TRF	Tandem_Repeat	212272	212344	146	+	.	.
scaffold43388	subtractBed	intrn	217320	218186	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	217320	218186	100	+	.	.
scaffold43388	subtractBed	intrn	217416	218144	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_Kolobok-IS4	217416	218144	131	+	.	.
scaffold43388	subtractBed	intrn	218291	219073	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	218291	219073	414	-	.	.
scaffold43388	subtractBed	intrn	214456	214974	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	214456	214974	58	+	.	.
scaffold43388	subtractBed	intrn	219717	219797	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	219717	219797	27	-	.	.
scaffold43388	subtractBed	intrn	214660	214974	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	214660	214974	98	+	.	.
scaffold43388	subtractBed	intrn	226436	227023	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	226436	227023	72	-	.	.
scaffold43388	subtractBed	intrn	223676	224806	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_CR1	223676	224806	904	+	.	.
scaffold43388	subtractBed	intrn	222970	223680	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_CR1	222970	223680	541	+	.	.
scaffold43388	subtractBed	intrn	226002	226118	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	226002	226118	71	-	.	.
scaffold43388	subtractBed	intrn	226517	226942	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	226517	226942	175	-	.	.
scaffold43388	subtractBed	intrn	225812	225952	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	225812	225952	42	-	.	.
scaffold43388	subtractBed	intrn	225842	225991	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	DNA_IS4EU	225842	225991	70	-	.	.
scaffold43388	subtractBed	intrn	221544	222995	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_CR1	221544	222995	558	+	.	.
scaffold43388	subtractBed	intrn	232750	233007	.	-	.	Parent=CGI_10010121;
	scaffold43388	TRF	Tandem_Repeat	232750	233007	435	+	.	.
scaffold43388	subtractBed	intrn	230904	232643	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_RTE-X	230904	232643	371	+	.	.
scaffold43388	subtractBed	intrn	230661	231284	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_L2	230661	231284	115	+	.	.
scaffold43388	subtractBed	intrn	229844	229906	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_L1-Tx1	229844	229906	20	+	.	.
scaffold43388	subtractBed	intrn	230814	231272	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_RTE-X	230814	231272	271	+	.	.
scaffold43388	subtractBed	intrn	230520	231257	.	-	.	Parent=CGI_10010121;
	scaffold43388	WUBlastX	LINE_CR1	230520	231257	24	+	.	.
scaffold43396	subtractBed	intrn	14914	14970	.	+	.	Parent=CGI_10010143;
	scaffold43396	TRF	Tandem_Repeat	14679	15104	388	+	.	.
scaffold43396	subtractBed	intrn	38422	39045	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	38422	39045	776	+	.	.
scaffold43396	subtractBed	intrn	44570	44612	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	44570	44612	86	+	.	.
scaffold43396	subtractBed	intrn	50648	50701	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	50648	50701	108	+	.	.
scaffold43396	subtractBed	intrn	58431	58537	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	58431	58537	119	+	.	.
scaffold43396	subtractBed	intrn	58575	58600	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	58575	58600	52	+	.	.
scaffold43396	subtractBed	intrn	59646	59744	.	-	.	Parent=CGI_10010144;
	scaffold43396	TRF	Tandem_Repeat	59646	59744	153	+	.	.
scaffold43396	subtractBed	intrn	65070	65103	.	-	.	Parent=CGI_10010145;
	scaffold43396	TRF	Tandem_Repeat	65070	65103	68	+	.	.
scaffold43396	subtractBed	intrn	164404	164467	.	-	.	Parent=CGI_10010149;
	scaffold43396	TRF	Tandem_Repeat	164404	164467	71	+	.	.
scaffold43396	subtractBed	intrn	176432	176458	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	176432	176458	54	+	.	.
scaffold43396	subtractBed	intrn	184102	184155	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	184102	184155	108	+	.	.
scaffold43396	subtractBed	intrn	188412	188545	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	188412	188545	71	+	.	.
scaffold43396	subtractBed	intrn	194489	194599	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	194489	194599	82	+	.	.
scaffold43396	subtractBed	intrn	195437	195658	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195437	195658	123	+	.	.
scaffold43396	subtractBed	intrn	195437	195629	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195437	195629	110	+	.	.
scaffold43396	subtractBed	intrn	195804	195924	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195804	195924	90	+	.	.
scaffold43396	subtractBed	intrn	195691	195924	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195691	195924	106	+	.	.
scaffold43396	subtractBed	intrn	195768	195924	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195768	195924	125	+	.	.
scaffold43396	subtractBed	intrn	195757	195936	.	+	.	Parent=CGI_10010150;
	scaffold43396	TRF	Tandem_Repeat	195757	195936	129	+	.	.
scaffold43396	subtractBed	intrn	186430	186702	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	LINE_Penelope	186430	186702	102	+	.	.
scaffold43396	subtractBed	intrn	186734	186937	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	LINE_Penelope	186734	186937	22	+	.	.
scaffold43396	subtractBed	intrn	186734	186841	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	LINE_Penelope	186734	186841	44	+	.	.
scaffold43396	subtractBed	intrn	186391	186744	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	LINE_Penelope	186391	186744	75	+	.	.
scaffold43396	subtractBed	intrn	189214	189837	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	DNA_Harbinger	189214	189837	25	+	.	.
scaffold43396	subtractBed	intrn	189268	189459	.	+	.	Parent=CGI_10010150;
	scaffold43396	WUBlastX	DNA_Harbinger	189268	189459	61	+	.	.
scaffold43396	subtractBed	intrn	220452	220510	.	-	.	Parent=CGI_10010154;
	scaffold43396	TRF	Tandem_Repeat	220452	220510	82	+	.	.
scaffold43396	subtractBed	intrn	233652	233910	.	+	.	Parent=CGI_10010156;
	scaffold43396	TRF	Tandem_Repeat	233652	233910	342	+	.	.
scaffold43396	subtractBed	intrn	238566	238794	.	+	.	Parent=CGI_10010156;
	scaffold43396	TRF	Tandem_Repeat	238566	238794	178	+	.	.
scaffold43396	subtractBed	intrn	236876	237421	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	236876	237421	334	-	.	.
scaffold43396	subtractBed	intrn	235412	235585	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	235412	235585	24	-	.	.
scaffold43396	subtractBed	intrn	235006	235404	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	235006	235404	60	-	.	.
scaffold43396	subtractBed	intrn	235909	236871	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	235909	236871	394	-	.	.
scaffold43396	subtractBed	intrn	235445	235765	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	235445	235765	100	-	.	.
scaffold43396	subtractBed	intrn	235006	235293	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	235006	235293	137	-	.	.
scaffold43396	subtractBed	intrn	237754	237834	.	+	.	Parent=CGI_10010156;
	scaffold43396	WUBlastX	LTR_Ngaro	237754	237834	56	-	.	.
scaffold43406	subtractBed	intrn	23375	23462	.	+	.	Parent=CGI_10010206;
	scaffold43406	TRF	Tandem_Repeat	23375	23462	108	+	.	.
scaffold43406	subtractBed	intrn	24854	25418	.	+	.	Parent=CGI_10010206;
	scaffold43406	TRF	Tandem_Repeat	24854	25418	826	+	.	.
scaffold43406	subtractBed	intrn	37226	37274	.	+	.	Parent=CGI_10010208;
	scaffold43406	TRF	Tandem_Repeat	37226	37274	71	+	.	.
scaffold43406	subtractBed	intrn	82157	82549	.	+	.	Parent=CGI_10010210;
	scaffold43406	WUBlastX	LINE_RTE-BovB	82157	82549	243	-	.	.
scaffold43406	subtractBed	intrn	82202	82612	.	+	.	Parent=CGI_10010210;
	scaffold43406	WUBlastX	LINE_RTE-BovB	82202	82612	68	-	.	.
scaffold43406	subtractBed	intrn	165620	165654	.	+	.	Parent=CGI_10010214;
	scaffold43406	TRF	Tandem_Repeat	165620	165654	52	+	.	.
scaffold43406	subtractBed	intrn	174902	174926	.	+	.	Parent=CGI_10010214;
	scaffold43406	TRF	Tandem_Repeat	174902	174926	50	+	.	.
scaffold43406	subtractBed	intrn	189507	189545	.	+	.	Parent=CGI_10010215;
	scaffold43406	TRF	Tandem_Repeat	189507	189545	60	+	.	.
scaffold43406	subtractBed	intrn	192432	192459	.	+	.	Parent=CGI_10010215;
	scaffold43406	TRF	Tandem_Repeat	192432	192459	56	+	.	.
scaffold43426	subtractBed	intrn	34632	35464	.	+	.	Parent=CGI_10010296;
	scaffold43426	TRF	Tandem_Repeat	34632	35464	1211	+	.	.
scaffold43426	subtractBed	intrn	43386	43487	.	+	.	Parent=CGI_10010297;
	scaffold43426	TRF	Tandem_Repeat	43386	43487	64	+	.	.
scaffold43426	subtractBed	intrn	182530	182588	.	-	.	Parent=CGI_10010307;
	scaffold43426	TRF	Tandem_Repeat	182530	182588	88	+	.	.
scaffold43426	subtractBed	intrn	217863	217919	.	-	.	Parent=CGI_10010311;
	scaffold43426	TRF	Tandem_Repeat	217863	217919	50	+	.	.
scaffold43426	subtractBed	intrn	217861	217931	.	-	.	Parent=CGI_10010311;
	scaffold43426	TRF	Tandem_Repeat	217861	217931	72	+	.	.
scaffold43442	subtractBed	intrn	14072	14158	.	+	.	Parent=CGI_10010225;
	scaffold43442	TRF	Tandem_Repeat	14072	14158	138	+	.	.
scaffold43442	subtractBed	intrn	15173	15565	.	+	.	Parent=CGI_10010225;
	scaffold43442	TRF	Tandem_Repeat	15173	15565	437	+	.	.
scaffold43442	subtractBed	intrn	15134	15577	.	+	.	Parent=CGI_10010225;
	scaffold43442	TRF	Tandem_Repeat	15134	15577	827	+	.	.
scaffold43442	subtractBed	intrn	96071	96152	.	-	.	Parent=CGI_10010232;
	scaffold43442	TRF	Tandem_Repeat	96071	96152	82	+	.	.
scaffold43442	subtractBed	intrn	97066	97096	.	-	.	Parent=CGI_10010232;
	scaffold43442	TRF	Tandem_Repeat	97066	97096	62	+	.	.
scaffold43442	subtractBed	intrn	98043	98105	.	-	.	Parent=CGI_10010232;
	scaffold43442	TRF	Tandem_Repeat	98043	98105	126	+	.	.
scaffold43442	subtractBed	intrn	96071	96152	.	+	.	Parent=CGI_10010233;
	scaffold43442	TRF	Tandem_Repeat	96071	96152	82	+	.	.
scaffold43442	subtractBed	intrn	97066	97096	.	+	.	Parent=CGI_10010233;
	scaffold43442	TRF	Tandem_Repeat	97066	97096	62	+	.	.
scaffold43442	subtractBed	intrn	98043	98105	.	+	.	Parent=CGI_10010233;
	scaffold43442	TRF	Tandem_Repeat	98043	98105	126	+	.	.
scaffold43442	subtractBed	intrn	102490	102552	.	+	.	Parent=CGI_10010234;
	scaffold43442	TRF	Tandem_Repeat	102490	102552	117	+	.	.
scaffold43442	subtractBed	intrn	104142	104196	.	+	.	Parent=CGI_10010234;
	scaffold43442	TRF	Tandem_Repeat	104142	104196	110	+	.	.
scaffold43442	subtractBed	intrn	107403	107435	.	+	.	Parent=CGI_10010234;
	scaffold43442	TRF	Tandem_Repeat	107403	107435	50	+	.	.
scaffold43442	subtractBed	intrn	125939	125981	.	+	.	Parent=CGI_10010235;
	scaffold43442	TRF	Tandem_Repeat	125939	125981	86	+	.	.
scaffold43442	subtractBed	intrn	142764	142789	.	+	.	Parent=CGI_10010236;
	scaffold43442	TRF	Tandem_Repeat	142764	142789	52	+	.	.
scaffold43442	subtractBed	intrn	182680	182706	.	-	.	Parent=CGI_10010238;
	scaffold43442	TRF	Tandem_Repeat	182680	182706	54	+	.	.
scaffold43442	subtractBed	intrn	188797	189304	.	-	.	Parent=CGI_10010238;
	scaffold43442	TRF	Tandem_Repeat	188797	189304	583	+	.	.
scaffold43446	subtractBed	intrn	34960	35006	.	+	.	Parent=CGI_10010397;
	scaffold43446	TRF	Tandem_Repeat	34960	35006	67	+	.	.
scaffold43446	subtractBed	intrn	86815	86868	.	+	.	Parent=CGI_10010398;
	scaffold43446	TRF	Tandem_Repeat	86815	86868	108	+	.	.
scaffold43446	subtractBed	intrn	142286	142406	.	+	.	Parent=CGI_10010402;
	scaffold43446	TRF	Tandem_Repeat	142286	142406	163	+	.	.
scaffold43446	subtractBed	intrn	142271	142416	.	+	.	Parent=CGI_10010402;
	scaffold43446	TRF	Tandem_Repeat	142271	142416	138	+	.	.
scaffold43446	subtractBed	intrn	142931	142966	.	+	.	Parent=CGI_10010402;
	scaffold43446	TRF	Tandem_Repeat	142931	142966	58	+	.	.
scaffold43446	subtractBed	intrn	163039	163227	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_CR1	163039	163227	55	+	.	.
scaffold43446	subtractBed	intrn	163235	163330	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_CR1	163235	163330	48	+	.	.
scaffold43446	subtractBed	intrn	161921	163021	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_CR1	161921	163021	188	+	.	.
scaffold43446	subtractBed	intrn	161837	162007	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_Rex-Babar	161837	162007	49	+	.	.
scaffold43446	subtractBed	intrn	162476	163021	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_CR1	162476	163021	189	+	.	.
scaffold43446	subtractBed	intrn	163235	163363	.	-	.	Parent=CGI_10010403;
	scaffold43446	WUBlastX	LINE_CR1	163235	163363	41	+	.	.
scaffold43446	subtractBed	intrn	181312	181434	.	-	.	Parent=CGI_10010404;
	scaffold43446	TRF	Tandem_Repeat	181312	181434	85	+	.	.
scaffold43446	subtractBed	intrn	183641	183683	.	-	.	Parent=CGI_10010404;
	scaffold43446	TRF	Tandem_Repeat	183641	183683	86	+	.	.
scaffold43446	subtractBed	intrn	186252	186308	.	-	.	Parent=CGI_10010404;
	scaffold43446	TRF	Tandem_Repeat	186252	186308	96	+	.	.
scaffold43446	subtractBed	intrn	188416	188535	.	-	.	Parent=CGI_10010404;
	scaffold43446	WUBlastX	LINE_RTE-X	188416	188535	24	+	.	.
scaffold43446	subtractBed	intrn	187899	188378	.	-	.	Parent=CGI_10010404;
	scaffold43446	WUBlastX	LINE_RTE-X	187899	188378	24	+	.	.
scaffold43446	subtractBed	intrn	196921	196971	.	-	.	Parent=CGI_10010404;
	scaffold43446	TRF	Tandem_Repeat	196921	196971	57	+	.	.
scaffold43446	subtractBed	intrn	200177	201655	.	-	.	Parent=CGI_10010404;
	scaffold43446	WUBlastX	LINE_CR1	200177	201655	132	+	.	.
scaffold43446	subtractBed	intrn	200621	202603	.	-	.	Parent=CGI_10010404;
	scaffold43446	WUBlastX	LINE_RTE-X	200621	202603	878	+	.	.
scaffold43446	subtractBed	intrn	210057	210223	.	+	.	Parent=CGI_10010406;
	scaffold43446	TRF	Tandem_Repeat	210057	210223	307	+	.	.
scaffold43446	subtractBed	intrn	214632	214664	.	-	.	Parent=CGI_10010407;
	scaffold43446	TRF	Tandem_Repeat	214632	214664	66	+	.	.
scaffold43446	subtractBed	intrn	235203	235384	.	+	.	Parent=CGI_10010409;
	scaffold43446	TRF	Tandem_Repeat	235203	235384	208	+	.	.
scaffold43446	subtractBed	intrn	235203	235384	.	-	.	Parent=CGI_10010410;
	scaffold43446	TRF	Tandem_Repeat	235203	235384	208	+	.	.
scaffold43446	subtractBed	intrn	244474	244514	.	-	.	Parent=CGI_10010411;
	scaffold43446	TRF	Tandem_Repeat	244474	244514	55	+	.	.
scaffold43446	subtractBed	intrn	244755	245092	.	-	.	Parent=CGI_10010411;
	scaffold43446	TRF	Tandem_Repeat	244755	245092	419	+	.	.
scaffold43446	subtractBed	intrn	244755	245206	.	-	.	Parent=CGI_10010411;
	scaffold43446	TRF	Tandem_Repeat	244755	245206	449	+	.	.
scaffold43452	subtractBed	intrn	90881	90944	.	-	.	Parent=CGI_10010481;
	scaffold43452	TRF	Tandem_Repeat	90881	90944	83	+	.	.
scaffold43452	subtractBed	intrn	92581	92629	.	-	.	Parent=CGI_10010481;
	scaffold43452	TRF	Tandem_Repeat	92581	92629	91	+	.	.
scaffold43452	subtractBed	intrn	95394	97118	.	-	.	Parent=CGI_10010481;
	scaffold43452	TRF	Tandem_Repeat	95394	97118	1994	+	.	.
scaffold43452	subtractBed	intrn	162329	162361	.	-	.	Parent=CGI_10010483;
	scaffold43452	TRF	Tandem_Repeat	162329	162361	66	+	.	.
scaffold43452	subtractBed	intrn	162664	162713	.	-	.	Parent=CGI_10010483;
	scaffold43452	TRF	Tandem_Repeat	162664	162713	59	+	.	.
scaffold43452	subtractBed	intrn	183917	183981	.	-	.	Parent=CGI_10010484;
	scaffold43452	TRF	Tandem_Repeat	183917	183981	67	+	.	.
scaffold43452	subtractBed	intrn	183917	183981	.	+	.	Parent=CGI_10010485;
	scaffold43452	TRF	Tandem_Repeat	183917	183981	67	+	.	.
scaffold43452	subtractBed	intrn	190091	190123	.	+	.	Parent=CGI_10010485;
	scaffold43452	TRF	Tandem_Repeat	190091	190123	57	+	.	.
scaffold43494	subtractBed	intrn	117114	117139	.	-	.	Parent=CGI_10010566;
	scaffold43494	TRF	Tandem_Repeat	117114	117139	52	+	.	.
scaffold43494	subtractBed	intrn	117892	117976	.	-	.	Parent=CGI_10010566;
	scaffold43494	TRF	Tandem_Repeat	117892	117976	97	+	.	.
scaffold43494	subtractBed	intrn	118225	118276	.	-	.	Parent=CGI_10010566;
	scaffold43494	TRF	Tandem_Repeat	118225	118276	70	+	.	.
scaffold43494	subtractBed	intrn	166730	166851	.	-	.	Parent=CGI_10010569;
	scaffold43494	TRF	Tandem_Repeat	166730	166851	244	+	.	.
scaffold43494	subtractBed	intrn	225823	225854	.	+	.	Parent=CGI_10010573;
	scaffold43494	TRF	Tandem_Repeat	225823	225854	55	+	.	.
scaffold43494	subtractBed	intrn	225854	225888	.	+	.	Parent=CGI_10010573;
	scaffold43494	TRF	Tandem_Repeat	225854	225888	70	+	.	.
scaffold43500	subtractBed	intrn	11772	11828	.	-	.	Parent=CGI_10010612;
	scaffold43500	TRF	Tandem_Repeat	11772	11828	114	+	.	.
scaffold43500	subtractBed	intrn	12492	12553	.	-	.	Parent=CGI_10010612;
	scaffold43500	TRF	Tandem_Repeat	12492	12553	124	+	.	.
scaffold43500	subtractBed	intrn	71688	71735	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_L1	71688	71735	20	-	.	.
scaffold43500	subtractBed	intrn	70732	71493	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	70732	71493	213	-	.	.
scaffold43500	subtractBed	intrn	69625	70383	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	69625	70383	169	-	.	.
scaffold43500	subtractBed	intrn	70600	71295	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	70600	71295	234	-	.	.
scaffold43500	subtractBed	intrn	69748	70518	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	69748	70518	431	-	.	.
scaffold43500	subtractBed	intrn	70524	70721	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	70524	70721	127	-	.	.
scaffold43500	subtractBed	intrn	70729	71244	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_RTE-X	70729	71244	361	-	.	.
scaffold43500	subtractBed	intrn	70744	71640	.	-	.	Parent=CGI_10010614;
	scaffold43500	WUBlastX	LINE_L1	70744	71640	22	-	.	.
scaffold43500	subtractBed	intrn	191357	191587	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	191357	191587	390	+	.	.
scaffold43500	subtractBed	intrn	193478	193573	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	193478	193573	131	+	.	.
scaffold43500	subtractBed	intrn	193478	193573	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	193478	193573	120	+	.	.
scaffold43500	subtractBed	intrn	217687	217883	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	217687	217883	154	+	.	.
scaffold43500	subtractBed	intrn	224574	224809	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	224574	224809	214	+	.	.
scaffold43500	subtractBed	intrn	224809	224852	.	+	.	Parent=CGI_10010622;
	scaffold43500	TRF	Tandem_Repeat	224809	224852	61	+	.	.
scaffold43500	subtractBed	intrn	249137	249379	.	+	.	Parent=CGI_10010625;
	scaffold43500	TRF	Tandem_Repeat	249125	249379	402	+	.	.
scaffold43520	subtractBed	intrn	56297	56345	.	+	.	Parent=CGI_10010712;
	scaffold43520	TRF	Tandem_Repeat	56297	56345	80	+	.	.
scaffold43520	subtractBed	intrn	85114	85159	.	-	.	Parent=CGI_10010714;
	scaffold43520	TRF	Tandem_Repeat	85114	85159	83	+	.	.
scaffold43520	subtractBed	intrn	91199	92007	.	-	.	Parent=CGI_10010714;
	scaffold43520	TRF	Tandem_Repeat	91199	92007	773	+	.	.
scaffold43520	subtractBed	intrn	93453	93510	.	-	.	Parent=CGI_10010714;
	scaffold43520	TRF	Tandem_Repeat	93453	93510	91	+	.	.
scaffold43520	subtractBed	intrn	104239	104277	.	+	.	Parent=CGI_10010716;
	scaffold43520	TRF	Tandem_Repeat	104239	104277	62	+	.	.
scaffold43520	subtractBed	intrn	144291	144317	.	-	.	Parent=CGI_10010718;
	scaffold43520	TRF	Tandem_Repeat	144291	144317	54	+	.	.
scaffold43520	subtractBed	intrn	185338	186297	.	-	.	Parent=CGI_10010721;
	scaffold43520	WUBlastX	LTR_Ngaro	185338	186297	54	+	.	.
scaffold43520	subtractBed	intrn	185629	186030	.	-	.	Parent=CGI_10010721;
	scaffold43520	WUBlastX	LTR_Ngaro	185629	186030	66	+	.	.
scaffold43520	subtractBed	intrn	188920	189144	.	-	.	Parent=CGI_10010721;
	scaffold43520	WUBlastX	LINE_Penelope	188920	189144	59	+	.	.
scaffold43520	subtractBed	intrn	211678	212159	.	-	.	Parent=CGI_10010721;
	scaffold43520	TRF	Tandem_Repeat	211678	212159	721	+	.	.
scaffold43520	subtractBed	intrn	240605	240657	.	-	.	Parent=CGI_10010723;
	scaffold43520	TRF	Tandem_Repeat	240605	240657	106	+	.	.
scaffold43520	subtractBed	intrn	266457	266501	.	-	.	Parent=CGI_10010725;
	scaffold43520	TRF	Tandem_Repeat	266457	266501	63	+	.	.
scaffold43520	subtractBed	intrn	266574	266606	.	-	.	Parent=CGI_10010725;
	scaffold43520	TRF	Tandem_Repeat	266574	266606	66	+	.	.
scaffold43520	subtractBed	intrn	264476	264847	.	-	.	Parent=CGI_10010725;
	scaffold43520	WUBlastX	DNA_Sola	264476	264847	122	+	.	.
scaffold43522	subtractBed	intrn	48455	48504	.	-	.	Parent=CGI_10010546;
	scaffold43522	TRF	Tandem_Repeat	48455	48504	100	+	.	.
scaffold43522	subtractBed	intrn	49425	49466	.	-	.	Parent=CGI_10010546;
	scaffold43522	TRF	Tandem_Repeat	49425	49466	59	+	.	.
scaffold43522	subtractBed	intrn	92650	92922	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_RTE-X	92650	92922	62	+	.	.
scaffold43522	subtractBed	intrn	92707	92922	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_RTE-X	92707	92922	77	+	.	.
scaffold43522	subtractBed	intrn	92722	92985	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_RTE-X	92722	92985	31	+	.	.
scaffold43522	subtractBed	intrn	92491	92901	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_RTE-X	92491	92901	21	+	.	.
scaffold43522	subtractBed	intrn	101177	102064	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_L1-Tx1	101177	102064	333	-	.	.
scaffold43522	subtractBed	intrn	101393	102205	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_L1	101393	102205	45	-	.	.
scaffold43522	subtractBed	intrn	102908	102997	.	+	.	Parent=CGI_10010551;
	scaffold43522	WUBlastX	LINE_L1	102908	102997	22	-	.	.
scaffold43522	subtractBed	intrn	185212	185247	.	+	.	Parent=CGI_10010559;
	scaffold43522	TRF	Tandem_Repeat	185212	185247	56	+	.	.
scaffold43522	subtractBed	intrn	191310	191338	.	+	.	Parent=CGI_10010561;
	scaffold43522	TRF	Tandem_Repeat	191310	191338	58	+	.	.
scaffold43522	subtractBed	intrn	201140	201187	.	-	.	Parent=CGI_10010562;
	scaffold43522	TRF	Tandem_Repeat	201140	201187	96	+	.	.
scaffold43522	subtractBed	intrn	220532	220583	.	-	.	Parent=CGI_10010563;
	scaffold43522	TRF	Tandem_Repeat	220532	220583	95	+	.	.
scaffold43522	subtractBed	intrn	240399	240456	.	+	.	Parent=CGI_10010564;
	scaffold43522	TRF	Tandem_Repeat	240399	240456	50	+	.	.
scaffold43522	subtractBed	intrn	245090	245151	.	+	.	Parent=CGI_10010564;
	scaffold43522	TRF	Tandem_Repeat	245090	245151	124	+	.	.
scaffold43526	subtractBed	intrn	41788	41838	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	41788	41838	102	+	.	.
scaffold43526	subtractBed	intrn	38414	38530	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_RTE-X	38414	38530	38	+	.	.
scaffold43526	subtractBed	intrn	42876	43286	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_L1-Tx1	42876	43286	70	+	.	.
scaffold43526	subtractBed	intrn	38453	38632	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_RTE-X	38453	38632	26	+	.	.
scaffold43526	subtractBed	intrn	38453	38530	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_RTE-X	38453	38530	59	+	.	.
scaffold43526	subtractBed	intrn	42864	43361	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_L1-Tx1	42864	43361	67	+	.	.
scaffold43526	subtractBed	intrn	37356	37619	.	+	.	Parent=CGI_10010784;
	scaffold43526	WUBlastX	LINE_RTE-X	37356	37619	82	+	.	.
scaffold43526	subtractBed	intrn	46655	46695	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	46655	46695	82	+	.	.
scaffold43526	subtractBed	intrn	47840	47869	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	47840	47869	60	+	.	.
scaffold43526	subtractBed	intrn	49971	49998	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	49971	49998	56	+	.	.
scaffold43526	subtractBed	intrn	58115	58157	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	58115	58157	86	+	.	.
scaffold43526	subtractBed	intrn	60576	60622	.	+	.	Parent=CGI_10010784;
	scaffold43526	TRF	Tandem_Repeat	60576	60622	94	+	.	.
scaffold43526	subtractBed	intrn	86680	86797	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	86680	86797	73	+	.	.
scaffold43526	subtractBed	intrn	94443	94477	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	94443	94477	70	+	.	.
scaffold43526	subtractBed	intrn	102453	102777	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	102453	102777	402	+	.	.
scaffold43526	subtractBed	intrn	103406	103604	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	103406	103604	344	+	.	.
scaffold43526	subtractBed	intrn	104789	104835	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	104789	104835	94	+	.	.
scaffold43526	subtractBed	intrn	105072	105331	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	105072	105331	304	+	.	.
scaffold43526	subtractBed	intrn	105072	105331	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	105072	105331	290	+	.	.
scaffold43526	subtractBed	intrn	105072	105331	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	105072	105331	306	+	.	.
scaffold43526	subtractBed	intrn	105979	106303	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	105979	106303	384	+	.	.
scaffold43526	subtractBed	intrn	105979	106305	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	105979	106305	396	+	.	.
scaffold43526	subtractBed	intrn	109490	110198	.	-	.	Parent=CGI_10010786;
	scaffold43526	TRF	Tandem_Repeat	109490	110198	383	+	.	.
scaffold43526	subtractBed	intrn	240855	240922	.	-	.	Parent=CGI_10010791;
	scaffold43526	TRF	Tandem_Repeat	240855	240922	136	+	.	.
scaffold43530	subtractBed	intrn	31223	31883	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	31223	31883	848	+	.	.
scaffold43530	subtractBed	intrn	44927	44957	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	44927	44957	62	+	.	.
scaffold43530	subtractBed	intrn	47489	47567	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	47489	47567	71	+	.	.
scaffold43530	subtractBed	intrn	47460	47498	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	47460	47498	78	+	.	.
scaffold43530	subtractBed	intrn	51348	51400	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	51348	51400	106	+	.	.
scaffold43530	subtractBed	intrn	52248	52305	.	-	.	Parent=CGI_10010727;
	scaffold43530	TRF	Tandem_Repeat	52248	52305	109	+	.	.
scaffold43530	subtractBed	intrn	100352	100402	.	+	.	Parent=CGI_10010728;
	scaffold43530	TRF	Tandem_Repeat	100352	100402	84	+	.	.
scaffold43530	subtractBed	intrn	105672	105726	.	+	.	Parent=CGI_10010728;
	scaffold43530	TRF	Tandem_Repeat	105672	105726	103	+	.	.
scaffold43530	subtractBed	intrn	106197	106461	.	+	.	Parent=CGI_10010728;
	scaffold43530	TRF	Tandem_Repeat	106197	106461	219	+	.	.
scaffold43530	subtractBed	intrn	106197	106434	.	+	.	Parent=CGI_10010728;
	scaffold43530	TRF	Tandem_Repeat	106197	106434	307	+	.	.
scaffold43530	subtractBed	intrn	107578	107606	.	+	.	Parent=CGI_10010728;
	scaffold43530	TRF	Tandem_Repeat	107578	107606	58	+	.	.
scaffold43530	subtractBed	intrn	118986	119016	.	-	.	Parent=CGI_10010729;
	scaffold43530	TRF	Tandem_Repeat	118986	119016	62	+	.	.
scaffold43530	subtractBed	intrn	127183	127310	.	+	.	Parent=CGI_10010730;
	scaffold43530	TRF	Tandem_Repeat	127183	127310	94	+	.	.
scaffold43530	subtractBed	intrn	127232	127310	.	+	.	Parent=CGI_10010730;
	scaffold43530	TRF	Tandem_Repeat	127232	127310	140	+	.	.
scaffold43530	subtractBed	intrn	131590	131655	.	-	.	Parent=CGI_10010731;
	scaffold43530	TRF	Tandem_Repeat	131590	131655	132	+	.	.
scaffold43536	subtractBed	intrn	4856	4888	.	+	.	Parent=CGI_10010843;
	scaffold43536	TRF	Tandem_Repeat	4856	4888	66	+	.	.
scaffold43536	subtractBed	intrn	16926	16975	.	+	.	Parent=CGI_10010846;
	scaffold43536	TRF	Tandem_Repeat	16926	16975	100	+	.	.
scaffold43536	subtractBed	intrn	23960	24041	.	-	.	Parent=CGI_10010847;
	scaffold43536	TRF	Tandem_Repeat	23960	24041	51	+	.	.
scaffold43536	subtractBed	intrn	32182	32329	.	+	.	Parent=CGI_10010849;
	scaffold43536	TRF	Tandem_Repeat	32182	32329	224	+	.	.
scaffold43536	subtractBed	intrn	55867	55898	.	+	.	Parent=CGI_10010851;
	scaffold43536	TRF	Tandem_Repeat	55867	55898	64	+	.	.
scaffold43536	subtractBed	intrn	58224	58255	.	+	.	Parent=CGI_10010851;
	scaffold43536	TRF	Tandem_Repeat	58224	58255	55	+	.	.
scaffold43536	subtractBed	intrn	104507	104662	.	+	.	Parent=CGI_10010853;
	scaffold43536	TRF	Tandem_Repeat	104477	104662	159	+	.	.
scaffold43536	subtractBed	intrn	105320	105448	.	+	.	Parent=CGI_10010853;
	scaffold43536	TRF	Tandem_Repeat	105320	105466	240	+	.	.
scaffold43536	subtractBed	intrn	114183	114236	.	+	.	Parent=CGI_10010854;
	scaffold43536	TRF	Tandem_Repeat	114183	114236	108	+	.	.
scaffold43536	subtractBed	intrn	263209	263250	.	+	.	Parent=CGI_10010866;
	scaffold43536	TRF	Tandem_Repeat	263209	263250	68	+	.	.
scaffold43538	subtractBed	intrn	10608	11027	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	10608	11027	66	+	.	.
scaffold43538	subtractBed	intrn	12117	13187	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	12117	13187	243	+	.	.
scaffold43538	subtractBed	intrn	10572	10748	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	10572	10748	32	+	.	.
scaffold43538	subtractBed	intrn	11738	12730	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	11738	12730	299	+	.	.
scaffold43538	subtractBed	intrn	11092	11373	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	11092	11373	150	+	.	.
scaffold43538	subtractBed	intrn	12380	12730	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	12380	12730	344	+	.	.
scaffold43538	subtractBed	intrn	11152	11373	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	11152	11373	179	+	.	.
scaffold43538	subtractBed	intrn	10686	11165	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	10686	11165	69	+	.	.
scaffold43538	subtractBed	intrn	11367	11756	.	+	.	Parent=CGI_10010812;
	scaffold43538	WUBlastX	LTR_Gypsy	11367	11756	290	+	.	.
scaffold43538	subtractBed	intrn	31880	32503	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	31880	32503	27	+	.	.
scaffold43538	subtractBed	intrn	32012	32215	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	32012	32215	42	+	.	.
scaffold43538	subtractBed	intrn	32075	32515	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	32075	32515	178	+	.	.
scaffold43538	subtractBed	intrn	34919	35122	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	34919	35122	89	+	.	.
scaffold43538	subtractBed	intrn	34574	34780	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	34574	34780	186	+	.	.
scaffold43538	subtractBed	intrn	33559	34578	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy-Cigr	33559	34578	498	+	.	.
scaffold43538	subtractBed	intrn	34568	34918	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	34568	34918	77	+	.	.
scaffold43538	subtractBed	intrn	32425	33960	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	32425	33960	380	+	.	.
scaffold43538	subtractBed	intrn	32677	34578	.	-	.	Parent=CGI_10010813;
	scaffold43538	WUBlastX	LTR_Gypsy	32677	34578	444	+	.	.
scaffold43538	subtractBed	intrn	98339	98372	.	+	.	Parent=CGI_10010819;
	scaffold43538	TRF	Tandem_Repeat	98339	98372	68	+	.	.
scaffold43538	subtractBed	intrn	100690	100716	.	+	.	Parent=CGI_10010819;
	scaffold43538	TRF	Tandem_Repeat	100690	100716	54	+	.	.
scaffold43538	subtractBed	intrn	117424	117843	.	+	.	Parent=CGI_10010820;
	scaffold43538	TRF	Tandem_Repeat	117424	117843	387	+	.	.
scaffold43538	subtractBed	intrn	129474	129937	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	129474	129963	427	+	.	.
scaffold43538	subtractBed	intrn	133095	134594	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	133095	134594	2164	+	.	.
scaffold43538	subtractBed	intrn	133315	134594	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	133315	134594	1904	+	.	.
scaffold43538	subtractBed	intrn	133095	134537	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	133095	134537	2059	+	.	.
scaffold43538	subtractBed	intrn	136442	137405	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	136442	137464	1538	+	.	.
scaffold43538	subtractBed	intrn	136442	137405	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	136442	137464	1564	+	.	.
scaffold43538	subtractBed	intrn	139948	140145	.	-	.	Parent=CGI_10010821;
	scaffold43538	TRF	Tandem_Repeat	139948	140145	218	+	.	.
scaffold43538	subtractBed	intrn	143395	143892	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	143395	143892	599	+	.	.
scaffold43538	subtractBed	intrn	146030	146624	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	146030	146624	865	+	.	.
scaffold43538	subtractBed	intrn	146790	146979	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	146790	146979	199	+	.	.
scaffold43538	subtractBed	intrn	148307	148350	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	148307	148350	79	+	.	.
scaffold43538	subtractBed	intrn	148462	149058	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	148462	149058	1176	+	.	.
scaffold43538	subtractBed	intrn	149117	149252	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	149117	149252	272	+	.	.
scaffold43538	subtractBed	intrn	150114	150405	.	+	.	Parent=CGI_10010822;
	scaffold43538	TRF	Tandem_Repeat	150114	150405	487	+	.	.
scaffold43538	subtractBed	intrn	152453	153770	.	-	.	Parent=CGI_10010823;
	scaffold43538	TRF	Tandem_Repeat	152453	153794	1701	+	.	.
scaffold43538	subtractBed	intrn	155110	155847	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	155110	155847	166	+	.	.
scaffold43538	subtractBed	intrn	155416	155844	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	155416	155844	222	+	.	.
scaffold43538	subtractBed	intrn	155064	155363	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	155064	155363	51	+	.	.
scaffold43538	subtractBed	intrn	155431	155928	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	155431	155928	183	+	.	.
scaffold43538	subtractBed	intrn	154836	155327	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	154836	155327	30	+	.	.
scaffold43538	subtractBed	intrn	155919	155963	.	-	.	Parent=CGI_10010823;
	scaffold43538	WUBlastX	LINE_CR1	155919	155963	27	+	.	.
scaffold43538	subtractBed	intrn	165324	166429	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	165324	166429	1552	+	.	.
scaffold43538	subtractBed	intrn	166453	166512	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	166453	166512	70	+	.	.
scaffold43538	subtractBed	intrn	166460	166517	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	166460	166517	66	+	.	.
scaffold43538	subtractBed	intrn	168514	169510	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	168514	169510	1383	+	.	.
scaffold43538	subtractBed	intrn	169534	169593	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	169534	169593	70	+	.	.
scaffold43538	subtractBed	intrn	169541	169598	.	-	.	Parent=CGI_10010825;
	scaffold43538	TRF	Tandem_Repeat	169541	169598	66	+	.	.
scaffold43552	subtractBed	intrn	140688	140743	.	+	.	Parent=CGI_10011019;
	scaffold43552	TRF	Tandem_Repeat	140688	140743	62	+	.	.
scaffold43552	subtractBed	intrn	140685	140739	.	+	.	Parent=CGI_10011019;
	scaffold43552	TRF	Tandem_Repeat	140685	140739	56	+	.	.
scaffold43552	subtractBed	intrn	177389	177465	.	-	.	Parent=CGI_10011020;
	scaffold43552	TRF	Tandem_Repeat	177389	177465	154	+	.	.
scaffold43552	subtractBed	intrn	208701	208838	.	+	.	Parent=CGI_10011022;
	scaffold43552	WUBlastX	DNA_Sola	208701	208838	63	-	.	.
scaffold43552	subtractBed	intrn	208094	208138	.	+	.	Parent=CGI_10011022;
	scaffold43552	WUBlastX	DNA_Sola	207953	208138	38	-	.	.
scaffold43552	subtractBed	intrn	211786	211812	.	+	.	Parent=CGI_10011022;
	scaffold43552	TRF	Tandem_Repeat	211786	211812	54	+	.	.
scaffold43552	subtractBed	intrn	208701	208838	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	DNA_Sola	208701	208838	63	-	.	.
scaffold43552	subtractBed	intrn	208094	208138	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	DNA_Sola	207953	208138	38	-	.	.
scaffold43552	subtractBed	intrn	211786	211812	.	-	.	Parent=CGI_10011023;
	scaffold43552	TRF	Tandem_Repeat	211786	211812	54	+	.	.
scaffold43552	subtractBed	intrn	220199	220522	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LINE_CR1	220199	220522	22	-	.	.
scaffold43552	subtractBed	intrn	221461	222729	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Gypsy	221461	222729	373	-	.	.
scaffold43552	subtractBed	intrn	226728	227303	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Gypsy	226728	227303	143	-	.	.
scaffold43552	subtractBed	intrn	221662	223950	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Gypsy-Cigr	221662	223950	873	-	.	.
scaffold43552	subtractBed	intrn	221437	221568	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Copia	221437	221568	20	-	.	.
scaffold43552	subtractBed	intrn	223501	224043	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Gypsy	223501	224043	135	-	.	.
scaffold43552	subtractBed	intrn	225974	226159	.	-	.	Parent=CGI_10011023;
	scaffold43552	WUBlastX	LTR_Gypsy	225974	226159	22	-	.	.
scaffold43552	subtractBed	intrn	233532	233588	.	+	.	Parent=CGI_10011025;
	scaffold43552	TRF	Tandem_Repeat	233532	233588	114	+	.	.
scaffold43552	subtractBed	intrn	237341	237386	.	+	.	Parent=CGI_10011025;
	scaffold43552	TRF	Tandem_Repeat	237341	237386	56	+	.	.
scaffold43562	subtractBed	intrn	7994	8041	.	+	.	Parent=CGI_10011029;
	scaffold43562	TRF	Tandem_Repeat	7994	8041	87	+	.	.
scaffold43562	subtractBed	intrn	19274	19315	.	+	.	Parent=CGI_10011029;
	scaffold43562	TRF	Tandem_Repeat	19274	19315	75	+	.	.
scaffold43562	subtractBed	intrn	22298	22327	.	+	.	Parent=CGI_10011029;
	scaffold43562	TRF	Tandem_Repeat	22298	22327	60	+	.	.
scaffold43562	subtractBed	intrn	24270	24321	.	+	.	Parent=CGI_10011029;
	scaffold43562	TRF	Tandem_Repeat	24270	24321	104	+	.	.
scaffold43562	subtractBed	intrn	63526	63571	.	+	.	Parent=CGI_10011029;
	scaffold43562	TRF	Tandem_Repeat	63526	63571	92	+	.	.
scaffold43562	subtractBed	intrn	63080	63223	.	+	.	Parent=CGI_10011029;
	scaffold43562	WUBlastX	LINE_R2-Hero	63080	63223	25	+	.	.
scaffold43562	subtractBed	intrn	62157	62963	.	+	.	Parent=CGI_10011029;
	scaffold43562	WUBlastX	LINE_R2-Hero	62157	62963	115	+	.	.
scaffold43562	subtractBed	intrn	63122	63223	.	+	.	Parent=CGI_10011029;
	scaffold43562	WUBlastX	LINE_R2-Hero	63122	63223	42	+	.	.
scaffold43562	subtractBed	intrn	105220	106114	.	+	.	Parent=CGI_10011030;
	scaffold43562	TRF	Tandem_Repeat	105220	106114	1521	+	.	.
scaffold43562	subtractBed	intrn	117977	118065	.	+	.	Parent=CGI_10011030;
	scaffold43562	TRF	Tandem_Repeat	117977	118065	178	+	.	.
scaffold43562	subtractBed	intrn	124468	124543	.	+	.	Parent=CGI_10011030;
	scaffold43562	TRF	Tandem_Repeat	124468	124543	152	+	.	.
scaffold43562	subtractBed	intrn	117977	118065	.	-	.	Parent=CGI_10011032;
	scaffold43562	TRF	Tandem_Repeat	117977	118065	178	+	.	.
scaffold43562	subtractBed	intrn	124468	124543	.	-	.	Parent=CGI_10011033;
	scaffold43562	TRF	Tandem_Repeat	124468	124543	152	+	.	.
scaffold43562	subtractBed	intrn	131727	131829	.	-	.	Parent=CGI_10011033;
	scaffold43562	TRF	Tandem_Repeat	131727	131829	199	+	.	.
scaffold43562	subtractBed	intrn	132426	134471	.	-	.	Parent=CGI_10011033;
	scaffold43562	WUBlastX	LINE_RTE-X	132426	134471	1323	-	.	.
scaffold43562	subtractBed	intrn	132303	132968	.	-	.	Parent=CGI_10011033;
	scaffold43562	WUBlastX	LINE_RTE-X	132303	132968	103	-	.	.
scaffold43562	subtractBed	intrn	147650	147680	.	+	.	Parent=CGI_10011034;
	scaffold43562	TRF	Tandem_Repeat	147650	147680	53	+	.	.
scaffold43562	subtractBed	intrn	168288	168722	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	168288	168722	64	+	.	.
scaffold43562	subtractBed	intrn	167038	167133	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	LINE_CR1	167038	167133	34	+	.	.
scaffold43562	subtractBed	intrn	167151	167594	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	LINE_CR1	167151	167594	193	+	.	.
scaffold43562	subtractBed	intrn	167014	167130	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	LINE_CR1	167014	167130	33	+	.	.
scaffold43562	subtractBed	intrn	167148	167780	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	LINE_CR1	167148	167780	180	+	.	.
scaffold43562	subtractBed	intrn	169089	169313	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	169089	169313	115	+	.	.
scaffold43562	subtractBed	intrn	168745	169059	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	168745	169059	98	+	.	.
scaffold43562	subtractBed	intrn	169062	169355	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	169062	169355	56	+	.	.
scaffold43562	subtractBed	intrn	168065	168163	.	-	.	Parent=CGI_10011037;
	scaffold43562	WUBlastX	DNA_TcMar-Marin	168065	168163	20	+	.	.
scaffold43562	subtractBed	intrn	172478	172557	.	-	.	Parent=CGI_10011037;
	scaffold43562	TRF	Tandem_Repeat	172478	172557	144	+	.	.
scaffold43562	subtractBed	intrn	172926	173200	.	-	.	Parent=CGI_10011037;
	scaffold43562	TRF	Tandem_Repeat	172926	173200	268	+	.	.
scaffold43562	subtractBed	intrn	168288	168722	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	168288	168722	64	+	.	.
scaffold43562	subtractBed	intrn	167038	167133	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	LINE_CR1	167038	167133	34	+	.	.
scaffold43562	subtractBed	intrn	167151	167594	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	LINE_CR1	167151	167594	193	+	.	.
scaffold43562	subtractBed	intrn	167014	167130	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	LINE_CR1	167014	167130	33	+	.	.
scaffold43562	subtractBed	intrn	167148	167780	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	LINE_CR1	167148	167780	180	+	.	.
scaffold43562	subtractBed	intrn	169089	169313	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	169089	169313	115	+	.	.
scaffold43562	subtractBed	intrn	168745	169059	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	168745	169059	98	+	.	.
scaffold43562	subtractBed	intrn	169062	169355	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	DNA_TcMar-Tc1	169062	169355	56	+	.	.
scaffold43562	subtractBed	intrn	168065	168163	.	+	.	Parent=CGI_10011038;
	scaffold43562	WUBlastX	DNA_TcMar-Marin	168065	168163	20	+	.	.
scaffold43562	subtractBed	intrn	172478	172557	.	+	.	Parent=CGI_10011038;
	scaffold43562	TRF	Tandem_Repeat	172478	172557	144	+	.	.
scaffold43562	subtractBed	intrn	172926	173200	.	+	.	Parent=CGI_10011038;
	scaffold43562	TRF	Tandem_Repeat	172926	173200	268	+	.	.
scaffold43562	subtractBed	intrn	219848	219887	.	+	.	Parent=CGI_10011046;
	scaffold43562	TRF	Tandem_Repeat	219848	219887	80	+	.	.
scaffold43562	subtractBed	intrn	235836	235903	.	-	.	Parent=CGI_10011047;
	scaffold43562	TRF	Tandem_Repeat	235836	235903	118	+	.	.
scaffold43562	subtractBed	intrn	236416	236487	.	-	.	Parent=CGI_10011047;
	scaffold43562	TRF	Tandem_Repeat	236416	236487	126	+	.	.
scaffold43562	subtractBed	intrn	239336	239391	.	-	.	Parent=CGI_10011047;
	scaffold43562	TRF	Tandem_Repeat	239336	239391	112	+	.	.
scaffold43562	subtractBed	intrn	243973	244016	.	-	.	Parent=CGI_10011047;
	scaffold43562	TRF	Tandem_Repeat	243973	244016	88	+	.	.
scaffold43574	subtractBed	intrn	854	1460	.	+	.	Parent=CGI_10010868;
	scaffold43574	TRF	Tandem_Repeat	854	1460	714	+	.	.
scaffold43574	subtractBed	intrn	43414	43686	.	-	.	Parent=CGI_10010869;
	scaffold43574	TRF	Tandem_Repeat	43414	43686	413	+	.	.
scaffold43574	subtractBed	intrn	44185	44623	.	-	.	Parent=CGI_10010869;
	scaffold43574	TRF	Tandem_Repeat	44185	44623	367	+	.	.
scaffold43574	subtractBed	intrn	44167	44765	.	-	.	Parent=CGI_10010869;
	scaffold43574	TRF	Tandem_Repeat	44167	44765	410	+	.	.
scaffold43574	subtractBed	intrn	44173	44689	.	-	.	Parent=CGI_10010869;
	scaffold43574	TRF	Tandem_Repeat	44173	44689	361	+	.	.
scaffold43574	subtractBed	intrn	45666	45700	.	-	.	Parent=CGI_10010869;
	scaffold43574	TRF	Tandem_Repeat	45666	45700	61	+	.	.
scaffold43574	subtractBed	intrn	56826	57264	.	+	.	Parent=CGI_10010870;
	scaffold43574	TRF	Tandem_Repeat	56826	57264	479	+	.	.
scaffold43574	subtractBed	intrn	71188	71432	.	+	.	Parent=CGI_10010872;
	scaffold43574	TRF	Tandem_Repeat	71188	71432	298	+	.	.
scaffold43574	subtractBed	intrn	103173	103234	.	+	.	Parent=CGI_10010873;
	scaffold43574	TRF	Tandem_Repeat	103173	103234	124	+	.	.
scaffold43574	subtractBed	intrn	113608	113768	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	113608	113771	301	+	.	.
scaffold43574	subtractBed	intrn	114002	114027	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	114002	114027	52	+	.	.
scaffold43574	subtractBed	intrn	114747	114771	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	114747	114771	50	+	.	.
scaffold43574	subtractBed	intrn	116004	116379	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	116004	116379	565	+	.	.
scaffold43574	subtractBed	intrn	116450	117197	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	116450	117197	1094	+	.	.
scaffold43574	subtractBed	intrn	122450	122723	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	122450	122723	305	+	.	.
scaffold43574	subtractBed	intrn	122452	122723	.	-	.	Parent=CGI_10010874;
	scaffold43574	TRF	Tandem_Repeat	122452	122723	301	+	.	.
scaffold43574	subtractBed	intrn	144362	144409	.	+	.	Parent=CGI_10010876;
	scaffold43574	TRF	Tandem_Repeat	144362	144409	78	+	.	.
scaffold43574	subtractBed	intrn	145877	145935	.	+	.	Parent=CGI_10010876;
	scaffold43574	TRF	Tandem_Repeat	145877	145935	57	+	.	.
scaffold43574	subtractBed	intrn	148747	148815	.	+	.	Parent=CGI_10010877;
	scaffold43574	TRF	Tandem_Repeat	148747	148815	120	+	.	.
scaffold43574	subtractBed	intrn	154942	155028	.	-	.	Parent=CGI_10010878;
	scaffold43574	TRF	Tandem_Repeat	154942	155028	115	+	.	.
scaffold43574	subtractBed	intrn	154943	155028	.	-	.	Parent=CGI_10010878;
	scaffold43574	TRF	Tandem_Repeat	154943	155028	100	+	.	.
scaffold43574	subtractBed	intrn	173212	173453	.	-	.	Parent=CGI_10010878;
	scaffold43574	TRF	Tandem_Repeat	173212	173453	432	+	.	.
scaffold43574	subtractBed	intrn	173212	173453	.	+	.	Parent=CGI_10010879;
	scaffold43574	TRF	Tandem_Repeat	173212	173453	432	+	.	.
scaffold43574	subtractBed	intrn	185415	185717	.	+	.	Parent=CGI_10010880;
	scaffold43574	TRF	Tandem_Repeat	185415	185717	382	+	.	.
scaffold43574	subtractBed	intrn	187804	188416	.	+	.	Parent=CGI_10010880;
	scaffold43574	TRF	Tandem_Repeat	187804	188416	845	+	.	.
scaffold43574	subtractBed	intrn	187804	188416	.	+	.	Parent=CGI_10010880;
	scaffold43574	TRF	Tandem_Repeat	187804	188416	966	+	.	.
scaffold43574	subtractBed	intrn	186582	187181	.	+	.	Parent=CGI_10010880;
	scaffold43574	WUBlastX	LINE_RTE-X	186582	187181	102	-	.	.
scaffold43574	subtractBed	intrn	186708	187181	.	+	.	Parent=CGI_10010880;
	scaffold43574	WUBlastX	LINE_RTE-X	186708	187181	125	-	.	.
scaffold43574	subtractBed	intrn	189891	190088	.	+	.	Parent=CGI_10010880;
	scaffold43574	TRF	Tandem_Repeat	189883	190088	403	+	.	.
scaffold43574	subtractBed	intrn	191131	191197	.	+	.	Parent=CGI_10010880;
	scaffold43574	TRF	Tandem_Repeat	191131	191197	134	+	.	.
scaffold43574	subtractBed	intrn	204178	204378	.	-	.	Parent=CGI_10010881;
	scaffold43574	TRF	Tandem_Repeat	204178	204378	339	+	.	.
scaffold43574	subtractBed	intrn	214701	214739	.	-	.	Parent=CGI_10010881;
	scaffold43574	TRF	Tandem_Repeat	214701	214739	51	+	.	.
scaffold43574	subtractBed	intrn	233545	233782	.	+	.	Parent=CGI_10010882;
	scaffold43574	TRF	Tandem_Repeat	233545	233782	160	+	.	.
scaffold43574	subtractBed	intrn	233414	233819	.	+	.	Parent=CGI_10010882;
	scaffold43574	TRF	Tandem_Repeat	233403	233819	320	+	.	.
scaffold43574	subtractBed	intrn	246328	248010	.	-	.	Parent=CGI_10010884;
	scaffold43574	WUBlastX	LINE_RTE-X	246328	248010	615	+	.	.
scaffold43574	subtractBed	intrn	246241	246798	.	-	.	Parent=CGI_10010884;
	scaffold43574	WUBlastX	LINE_RTE-BovB	246241	246798	126	+	.	.
scaffold43574	subtractBed	intrn	266453	267079	.	+	.	Parent=CGI_10010886;
	scaffold43574	WUBlastX	LINE_R2-Hero	266453	267079	143	-	.	.
scaffold43574	subtractBed	intrn	265933	266412	.	+	.	Parent=CGI_10010886;
	scaffold43574	WUBlastX	LINE_R2-Hero	265933	266412	35	-	.	.
scaffold43574	subtractBed	intrn	266375	266755	.	+	.	Parent=CGI_10010886;
	scaffold43574	WUBlastX	LINE_R2-Hero	266375	266755	131	-	.	.
scaffold43576	subtractBed	intrn	81653	81702	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	81653	81702	55	+	.	.
scaffold43576	subtractBed	intrn	81701	81742	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	81701	81742	66	+	.	.
scaffold43576	subtractBed	intrn	96025	96062	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	96025	96062	76	+	.	.
scaffold43576	subtractBed	intrn	109773	109805	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	109773	109805	57	+	.	.
scaffold43576	subtractBed	intrn	110897	110933	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	110897	110933	56	+	.	.
scaffold43576	subtractBed	intrn	112613	112660	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	112613	112660	87	+	.	.
scaffold43576	subtractBed	intrn	129110	129162	.	+	.	Parent=CGI_10011130;
	scaffold43576	TRF	Tandem_Repeat	129110	129162	106	+	.	.
scaffold43576	subtractBed	intrn	215851	216090	.	-	.	Parent=CGI_10011134;
	scaffold43576	WUBlastX	DNA_TcMar-Tigge	215851	216090	31	+	.	.
scaffold43576	subtractBed	intrn	215990	216403	.	-	.	Parent=CGI_10011134;
	scaffold43576	WUBlastX	DNA_TcMar-Pogo	215990	216403	102	+	.	.
scaffold43576	subtractBed	intrn	216056	216415	.	-	.	Parent=CGI_10011134;
	scaffold43576	WUBlastX	DNA_TcMar-Pogo	216056	216415	136	+	.	.
scaffold43576	subtractBed	intrn	216131	216418	.	-	.	Parent=CGI_10011134;
	scaffold43576	WUBlastX	DNA_TcMar-Pogo	216131	216418	203	+	.	.
scaffold43598	subtractBed	intrn	44337	44385	.	-	.	Parent=CGI_10011323;
	scaffold43598	TRF	Tandem_Repeat	44337	44385	98	+	.	.
scaffold43598	subtractBed	intrn	216266	216315	.	-	.	Parent=CGI_10011326;
	scaffold43598	TRF	Tandem_Repeat	216266	216315	55	+	.	.
scaffold43598	subtractBed	intrn	228444	228515	.	-	.	Parent=CGI_10011327;
	scaffold43598	TRF	Tandem_Repeat	228444	228515	144	+	.	.
scaffold43598	subtractBed	intrn	229348	229382	.	-	.	Parent=CGI_10011327;
	scaffold43598	TRF	Tandem_Repeat	229348	229382	70	+	.	.
scaffold43598	subtractBed	intrn	238744	238800	.	+	.	Parent=CGI_10011328;
	scaffold43598	TRF	Tandem_Repeat	238744	238800	89	+	.	.
scaffold43598	subtractBed	intrn	261629	261733	.	-	.	Parent=CGI_10011329;
	scaffold43598	TRF	Tandem_Repeat	261629	261733	103	+	.	.
scaffold43598	subtractBed	intrn	261723	261774	.	-	.	Parent=CGI_10011329;
	scaffold43598	TRF	Tandem_Repeat	261723	261774	59	+	.	.
scaffold43598	subtractBed	intrn	263029	263184	.	-	.	Parent=CGI_10011329;
	scaffold43598	TRF	Tandem_Repeat	263029	263184	276	+	.	.
scaffold43598	subtractBed	intrn	263650	264444	.	-	.	Parent=CGI_10011329;
	scaffold43598	TRF	Tandem_Repeat	263650	264444	700	+	.	.
scaffold43598	subtractBed	intrn	265718	266673	.	-	.	Parent=CGI_10011329;
	scaffold43598	TRF	Tandem_Repeat	265718	266673	1184	+	.	.
scaffold43608	subtractBed	intrn	15096	15458	.	-	.	Parent=CGI_10011388;
	scaffold43608	WUBlastX	DNA_TcMar-Marin	15096	15458	83	+	.	.
scaffold43608	subtractBed	intrn	14610	14705	.	-	.	Parent=CGI_10011388;
	scaffold43608	WUBlastX	DNA_TcMar-Marin	14610	14705	30	+	.	.
scaffold43608	subtractBed	intrn	47375	47433	.	-	.	Parent=CGI_10011392;
	scaffold43608	TRF	Tandem_Repeat	47375	47433	118	+	.	.
scaffold43608	subtractBed	intrn	50365	50417	.	-	.	Parent=CGI_10011392;
	scaffold43608	TRF	Tandem_Repeat	50365	50417	88	+	.	.
scaffold43608	subtractBed	intrn	77059	77103	.	-	.	Parent=CGI_10011393;
	scaffold43608	TRF	Tandem_Repeat	77059	77103	90	+	.	.
scaffold43608	subtractBed	intrn	90909	90949	.	-	.	Parent=CGI_10011396;
	scaffold43608	TRF	Tandem_Repeat	90909	90949	50	+	.	.
scaffold43608	subtractBed	intrn	173127	173193	.	+	.	Parent=CGI_10011399;
	scaffold43608	TRF	Tandem_Repeat	173127	173193	56	+	.	.
scaffold43608	subtractBed	intrn	173145	173195	.	+	.	Parent=CGI_10011399;
	scaffold43608	TRF	Tandem_Repeat	173145	173195	57	+	.	.
scaffold43608	subtractBed	intrn	195440	195509	.	-	.	Parent=CGI_10011400;
	scaffold43608	WUBlastX	LTR_Copia	195440	195562	23	+	.	.
scaffold43608	subtractBed	intrn	242471	242509	.	-	.	Parent=CGI_10011404;
	scaffold43608	TRF	Tandem_Repeat	242471	242509	78	+	.	.
scaffold43616	subtractBed	intrn	7622	7786	.	+	.	Parent=CGI_10011407;
	scaffold43616	TRF	Tandem_Repeat	7622	7786	156	+	.	.
scaffold43616	subtractBed	intrn	14385	14426	.	+	.	Parent=CGI_10011407;
	scaffold43616	TRF	Tandem_Repeat	14385	14426	77	+	.	.
scaffold43616	subtractBed	intrn	24912	24968	.	+	.	Parent=CGI_10011409;
	scaffold43616	TRF	Tandem_Repeat	24912	24968	105	+	.	.
scaffold43616	subtractBed	intrn	36683	36729	.	-	.	Parent=CGI_10011411;
	scaffold43616	TRF	Tandem_Repeat	36683	36729	94	+	.	.
scaffold43616	subtractBed	intrn	92979	93048	.	+	.	Parent=CGI_10011416;
	scaffold43616	TRF	Tandem_Repeat	92979	93048	124	+	.	.
scaffold43616	subtractBed	intrn	137034	137065	.	-	.	Parent=CGI_10011422;
	scaffold43616	TRF	Tandem_Repeat	137034	137065	64	+	.	.
scaffold43616	subtractBed	intrn	205179	205319	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	205179	205319	32	-	.	.
scaffold43616	subtractBed	intrn	197050	197760	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	197050	197760	224	-	.	.
scaffold43616	subtractBed	intrn	197744	198022	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	197744	198022	168	-	.	.
scaffold43616	subtractBed	intrn	198422	199459	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	198422	199459	627	-	.	.
scaffold43616	subtractBed	intrn	199465	199872	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	199465	199872	209	-	.	.
scaffold43616	subtractBed	intrn	205391	206047	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_RTE-X	205391	206047	405	-	.	.
scaffold43616	subtractBed	intrn	198131	199444	.	+	.	Parent=CGI_10011425;
	scaffold43616	WUBlastX	LINE_L2	198131	199444	60	-	.	.
scaffold43616	subtractBed	intrn	230645	230682	.	+	.	Parent=CGI_10011426;
	scaffold43616	TRF	Tandem_Repeat	230645	230682	76	+	.	.
scaffold43616	subtractBed	intrn	231011	231068	.	+	.	Parent=CGI_10011426;
	scaffold43616	TRF	Tandem_Repeat	231011	231068	107	+	.	.
scaffold43616	subtractBed	intrn	233492	233525	.	+	.	Parent=CGI_10011426;
	scaffold43616	TRF	Tandem_Repeat	233492	233525	52	+	.	.
scaffold43616	subtractBed	intrn	234953	235866	.	+	.	Parent=CGI_10011426;
	scaffold43616	TRF	Tandem_Repeat	234953	235866	1385	+	.	.
scaffold43624	subtractBed	intrn	106913	106914	.	+	.	Parent=CGI_10011506;
	scaffold43624	WUBlastX	DNA_P	106913	107155	71	+	.	.
scaffold43624	subtractBed	intrn	171548	171597	.	-	.	Parent=CGI_10011508;
	scaffold43624	TRF	Tandem_Repeat	171548	171597	100	+	.	.
scaffold43624	subtractBed	intrn	259085	259110	.	-	.	Parent=CGI_10011510;
	scaffold43624	TRF	Tandem_Repeat	259085	259110	52	+	.	.
scaffold43624	subtractBed	intrn	285044	285469	.	-	.	Parent=CGI_10011515;
	scaffold43624	WUBlastX	LINE_L2	285044	285469	101	+	.	.
scaffold43624	subtractBed	intrn	290483	290549	.	-	.	Parent=CGI_10011515;
	scaffold43624	TRF	Tandem_Repeat	290483	290549	134	+	.	.
scaffold43630	subtractBed	intrn	38248	38307	.	+	.	Parent=CGI_10011521;
	scaffold43630	TRF	Tandem_Repeat	38248	38307	93	+	.	.
scaffold43630	subtractBed	intrn	45071	45589	.	+	.	Parent=CGI_10011521;
	scaffold43630	TRF	Tandem_Repeat	45071	45610	410	+	.	.
scaffold43630	subtractBed	intrn	45201	45589	.	+	.	Parent=CGI_10011521;
	scaffold43630	TRF	Tandem_Repeat	45201	45607	225	+	.	.
scaffold43630	subtractBed	intrn	45203	45589	.	+	.	Parent=CGI_10011521;
	scaffold43630	TRF	Tandem_Repeat	45203	45610	326	+	.	.
scaffold43630	subtractBed	intrn	47933	47968	.	+	.	Parent=CGI_10011521;
	scaffold43630	TRF	Tandem_Repeat	47933	47968	72	+	.	.
scaffold43630	subtractBed	intrn	69784	69841	.	+	.	Parent=CGI_10011522;
	scaffold43630	TRF	Tandem_Repeat	69784	69841	116	+	.	.
scaffold43630	subtractBed	intrn	74305	74336	.	+	.	Parent=CGI_10011522;
	scaffold43630	TRF	Tandem_Repeat	74305	74336	64	+	.	.
scaffold43630	subtractBed	intrn	93098	93147	.	+	.	Parent=CGI_10011523;
	scaffold43630	TRF	Tandem_Repeat	93098	93147	57	+	.	.
scaffold43630	subtractBed	intrn	93097	93139	.	+	.	Parent=CGI_10011523;
	scaffold43630	TRF	Tandem_Repeat	93097	93139	70	+	.	.
scaffold43630	subtractBed	intrn	94829	95517	.	+	.	Parent=CGI_10011523;
	scaffold43630	TRF	Tandem_Repeat	94829	95517	778	+	.	.
scaffold43630	subtractBed	intrn	102326	102364	.	-	.	Parent=CGI_10011524;
	scaffold43630	TRF	Tandem_Repeat	102326	102364	78	+	.	.
scaffold43630	subtractBed	intrn	109049	109095	.	-	.	Parent=CGI_10011524;
	scaffold43630	TRF	Tandem_Repeat	109049	109095	94	+	.	.
scaffold43630	subtractBed	intrn	124653	124697	.	+	.	Parent=CGI_10011525;
	scaffold43630	TRF	Tandem_Repeat	124653	124697	90	+	.	.
scaffold43630	subtractBed	intrn	131512	131691	.	+	.	Parent=CGI_10011525;
	scaffold43630	WUBlastX	LINE_L1-Tx1	131512	131691	20	+	.	.
scaffold43630	subtractBed	intrn	135454	135528	.	+	.	Parent=CGI_10011525;
	scaffold43630	TRF	Tandem_Repeat	135454	135528	150	+	.	.
scaffold43630	subtractBed	intrn	157866	157925	.	+	.	Parent=CGI_10011526;
	scaffold43630	TRF	Tandem_Repeat	157866	157925	93	+	.	.
scaffold43630	subtractBed	intrn	173986	174753	.	+	.	Parent=CGI_10011528;
	scaffold43630	WUBlastX	LTR_Gypsy	173986	174753	148	-	.	.
scaffold43630	subtractBed	intrn	189030	189123	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	189030	189123	163	+	.	.
scaffold43630	subtractBed	intrn	189597	189642	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	189597	189642	83	+	.	.
scaffold43630	subtractBed	intrn	209290	209338	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	209290	209338	89	+	.	.
scaffold43630	subtractBed	intrn	209336	209368	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	209336	209368	66	+	.	.
scaffold43630	subtractBed	intrn	209564	209600	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	209564	209600	74	+	.	.
scaffold43630	subtractBed	intrn	214303	214346	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	214303	214346	88	+	.	.
scaffold43630	subtractBed	intrn	225435	225485	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	225435	225485	102	+	.	.
scaffold43630	subtractBed	intrn	241897	241936	.	+	.	Parent=CGI_10011528;
	scaffold43630	TRF	Tandem_Repeat	241897	241936	80	+	.	.
scaffold43630	subtractBed	intrn	243880	244899	.	+	.	Parent=CGI_10011528;
	scaffold43630	WUBlastX	DNA_TcMar-Tc1	243880	244899	370	-	.	.
scaffold43630	subtractBed	intrn	271863	271958	.	-	.	Parent=CGI_10011530;
	scaffold43630	TRF	Tandem_Repeat	271863	271958	119	+	.	.
scaffold43634	subtractBed	intrn	60571	60612	.	+	.	Parent=CGI_10011531;
	scaffold43634	TRF	Tandem_Repeat	60571	60612	59	+	.	.
scaffold43634	subtractBed	intrn	63349	63501	.	+	.	Parent=CGI_10011531;
	scaffold43634	WUBlastX	DNA_hAT-Ac	63349	63501	87	-	.	.
scaffold43634	subtractBed	intrn	69227	69548	.	+	.	Parent=CGI_10011531;
	scaffold43634	TRF	Tandem_Repeat	69227	69548	366	+	.	.
scaffold43634	subtractBed	intrn	70082	70406	.	+	.	Parent=CGI_10011531;
	scaffold43634	TRF	Tandem_Repeat	70082	70406	528	+	.	.
scaffold43634	subtractBed	intrn	71539	71787	.	+	.	Parent=CGI_10011531;
	scaffold43634	WUBlastX	DNA_Maverick	71539	71787	97	+	.	.
scaffold43634	subtractBed	intrn	71832	71984	.	+	.	Parent=CGI_10011531;
	scaffold43634	WUBlastX	DNA_Maverick	71832	71984	69	+	.	.
scaffold43634	subtractBed	intrn	71377	71787	.	+	.	Parent=CGI_10011531;
	scaffold43634	WUBlastX	DNA_Maverick	71377	71787	81	+	.	.
scaffold43648	subtractBed	intrn	54456	54985	.	-	.	Parent=CGI_10011582;
	scaffold43648	TRF	Tandem_Repeat	54456	54985	559	+	.	.
scaffold43648	subtractBed	intrn	59615	59667	.	-	.	Parent=CGI_10011582;
	scaffold43648	TRF	Tandem_Repeat	59615	59667	83	+	.	.
scaffold43648	subtractBed	intrn	98138	98172	.	+	.	Parent=CGI_10011584;
	scaffold43648	TRF	Tandem_Repeat	98138	98172	70	+	.	.
scaffold43648	subtractBed	intrn	97981	98132	.	+	.	Parent=CGI_10011584;
	scaffold43648	WUBlastX	DNA_Crypton	97686	98132	49	+	.	.
scaffold43648	subtractBed	intrn	157492	158698	.	+	.	Parent=CGI_10011587;
	scaffold43648	TRF	Tandem_Repeat	157492	158698	1510	+	.	.
scaffold43648	subtractBed	intrn	169319	169393	.	-	.	Parent=CGI_10011589;
	scaffold43648	TRF	Tandem_Repeat	169319	169393	72	+	.	.
scaffold43648	subtractBed	intrn	169308	169406	.	-	.	Parent=CGI_10011589;
	scaffold43648	TRF	Tandem_Repeat	169308	169406	64	+	.	.
scaffold43648	subtractBed	intrn	174226	174282	.	-	.	Parent=CGI_10011590;
	scaffold43648	TRF	Tandem_Repeat	174226	174282	87	+	.	.
scaffold43648	subtractBed	intrn	187326	187376	.	-	.	Parent=CGI_10011591;
	scaffold43648	TRF	Tandem_Repeat	187326	187376	84	+	.	.
scaffold43648	subtractBed	intrn	208633	208678	.	+	.	Parent=CGI_10011592;
	scaffold43648	TRF	Tandem_Repeat	208633	208678	51	+	.	.
scaffold43648	subtractBed	intrn	235871	236047	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	235871	236047	77	+	.	.
scaffold43648	subtractBed	intrn	236730	236921	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	236730	236921	70	-	.	.
scaffold43648	subtractBed	intrn	232888	233013	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	232888	233013	73	+	.	.
scaffold43648	subtractBed	intrn	232110	232649	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	232110	232649	122	+	.	.
scaffold43648	subtractBed	intrn	232227	232643	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	232227	232643	152	+	.	.
scaffold43648	subtractBed	intrn	232783	233010	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	232783	233010	43	+	.	.
scaffold43648	subtractBed	intrn	235511	235732	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	235511	235732	56	+	.	.
scaffold43648	subtractBed	intrn	236147	236326	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	236147	236326	84	+	.	.
scaffold43648	subtractBed	intrn	236620	236706	.	-	.	Parent=CGI_10011593;
	scaffold43648	WUBlastX	DNA_Kolobok	236620	236706	20	+	.	.
scaffold43660	subtractBed	intrn	37089	37388	.	-	.	Parent=CGI_10011660;
	scaffold43660	TRF	Tandem_Repeat	37089	37388	194	+	.	.
scaffold43660	subtractBed	intrn	37143	37388	.	-	.	Parent=CGI_10011660;
	scaffold43660	TRF	Tandem_Repeat	37143	37388	206	+	.	.
scaffold43660	subtractBed	intrn	37089	37388	.	-	.	Parent=CGI_10011660;
	scaffold43660	TRF	Tandem_Repeat	37089	37388	503	+	.	.
scaffold43660	subtractBed	intrn	47105	47539	.	-	.	Parent=CGI_10011660;
	scaffold43660	WUBlastX	LINE_Penelope	47105	47539	58	-	.	.
scaffold43660	subtractBed	intrn	47015	47491	.	-	.	Parent=CGI_10011660;
	scaffold43660	WUBlastX	LINE_Penelope	47015	47491	56	-	.	.
scaffold43660	subtractBed	intrn	53340	53439	.	-	.	Parent=CGI_10011660;
	scaffold43660	TRF	Tandem_Repeat	53340	53439	94	+	.	.
scaffold43660	subtractBed	intrn	54067	54433	.	-	.	Parent=CGI_10011660;
	scaffold43660	TRF	Tandem_Repeat	54067	54433	321	+	.	.
scaffold43660	subtractBed	intrn	84193	84217	.	-	.	Parent=CGI_10011661;
	scaffold43660	TRF	Tandem_Repeat	84193	84217	50	+	.	.
scaffold43660	subtractBed	intrn	84616	84666	.	-	.	Parent=CGI_10011661;
	scaffold43660	TRF	Tandem_Repeat	84616	84666	68	+	.	.
scaffold43660	subtractBed	intrn	85320	85366	.	-	.	Parent=CGI_10011661;
	scaffold43660	TRF	Tandem_Repeat	85320	85366	94	+	.	.
scaffold43660	subtractBed	intrn	91755	91780	.	-	.	Parent=CGI_10011661;
	scaffold43660	TRF	Tandem_Repeat	91755	91780	52	+	.	.
scaffold43660	subtractBed	intrn	82247	82441	.	-	.	Parent=CGI_10011661;
	scaffold43660	WUBlastX	DNA_Kolobok-IS4	82247	82441	67	+	.	.
scaffold43660	subtractBed	intrn	82470	82760	.	-	.	Parent=CGI_10011661;
	scaffold43660	WUBlastX	DNA_IS4EU	82470	82760	143	+	.	.
scaffold43660	subtractBed	intrn	93326	93441	.	-	.	Parent=CGI_10011661;
	scaffold43660	WUBlastX	DNA_Harbinger	93326	93706	30	+	.	.
scaffold43660	subtractBed	intrn	93453	93686	.	-	.	Parent=CGI_10011661;
	scaffold43660	WUBlastX	DNA_Harbinger	93326	93706	30	+	.	.
scaffold43660	subtractBed	intrn	93453	93686	.	+	.	Parent=CGI_10011662;
	scaffold43660	WUBlastX	DNA_Harbinger	93326	93706	30	+	.	.
scaffold43660	subtractBed	intrn	127145	127231	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127145	127231	22	-	.	.
scaffold43660	subtractBed	intrn	127434	127820	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127434	127820	55	-	.	.
scaffold43660	subtractBed	intrn	127639	127881	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127639	127881	20	-	.	.
scaffold43660	subtractBed	intrn	128223	128357	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	128223	128357	34	-	.	.
scaffold43660	subtractBed	intrn	128223	128390	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	128223	128390	29	-	.	.
scaffold43660	subtractBed	intrn	127380	127655	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127380	127655	51	-	.	.
scaffold43660	subtractBed	intrn	127955	128191	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127955	128191	33	-	.	.
scaffold43660	subtractBed	intrn	126824	127081	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	126824	127081	34	-	.	.
scaffold43660	subtractBed	intrn	127440	127637	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	127440	127637	64	-	.	.
scaffold43660	subtractBed	intrn	128021	128191	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_Penelope	128021	128191	38	-	.	.
scaffold43660	subtractBed	intrn	132517	132657	.	+	.	Parent=CGI_10011663;
	scaffold43660	TRF	Tandem_Repeat	132517	132657	196	+	.	.
scaffold43660	subtractBed	intrn	134787	135029	.	+	.	Parent=CGI_10011663;
	scaffold43660	WUBlastX	LINE_L2	134787	135029	87	+	.	.
scaffold43660	subtractBed	intrn	164156	164201	.	-	.	Parent=CGI_10011666;
	scaffold43660	TRF	Tandem_Repeat	164156	164201	67	+	.	.
scaffold43660	subtractBed	intrn	164153	164206	.	-	.	Parent=CGI_10011666;
	scaffold43660	TRF	Tandem_Repeat	164153	164206	67	+	.	.
scaffold43660	subtractBed	intrn	170164	170556	.	-	.	Parent=CGI_10011666;
	scaffold43660	WUBlastX	LINE_L1-Tx1	170164	170556	31	-	.	.
scaffold43660	subtractBed	intrn	182374	182454	.	-	.	Parent=CGI_10011666;
	scaffold43660	WUBlastX	DNA_hAT-Blackja	182374	182454	37	-	.	.
scaffold43660	subtractBed	intrn	184141	184182	.	-	.	Parent=CGI_10011666;
	scaffold43660	TRF	Tandem_Repeat	184141	184182	84	+	.	.
scaffold43660	subtractBed	intrn	201391	201415	.	-	.	Parent=CGI_10011668;
	scaffold43660	TRF	Tandem_Repeat	201391	201415	50	+	.	.
scaffold43660	subtractBed	intrn	227276	227392	.	-	.	Parent=CGI_10011669;
	scaffold43660	WUBlastX	LINE_Penelope	227276	227392	46	+	.	.
scaffold43660	subtractBed	intrn	229491	229582	.	-	.	Parent=CGI_10011669;
	scaffold43660	TRF	Tandem_Repeat	229491	229582	123	+	.	.
scaffold43660	subtractBed	intrn	229662	229819	.	-	.	Parent=CGI_10011669;
	scaffold43660	TRF	Tandem_Repeat	229662	229819	160	+	.	.
scaffold43660	subtractBed	intrn	229871	229997	.	-	.	Parent=CGI_10011669;
	scaffold43660	TRF	Tandem_Repeat	229871	229997	146	+	.	.
scaffold43660	subtractBed	intrn	230091	230185	.	-	.	Parent=CGI_10011669;
	scaffold43660	TRF	Tandem_Repeat	230091	230185	104	+	.	.
scaffold43660	subtractBed	intrn	242318	242377	.	-	.	Parent=CGI_10011670;
	scaffold43660	TRF	Tandem_Repeat	242318	242377	106	+	.	.
scaffold43660	subtractBed	intrn	244225	244832	.	-	.	Parent=CGI_10011671;
	scaffold43660	TRF	Tandem_Repeat	244225	244832	1157	+	.	.
scaffold43660	subtractBed	intrn	245924	246067	.	-	.	Parent=CGI_10011671;
	scaffold43660	WUBlastX	LTR_Ngaro	245924	246067	109	+	.	.
scaffold43660	subtractBed	intrn	245036	245893	.	-	.	Parent=CGI_10011671;
	scaffold43660	WUBlastX	LTR_Ngaro	245036	245893	175	+	.	.
scaffold43660	subtractBed	intrn	254056	254104	.	-	.	Parent=CGI_10011671;
	scaffold43660	TRF	Tandem_Repeat	254056	254104	98	+	.	.
scaffold43660	subtractBed	intrn	264161	264204	.	-	.	Parent=CGI_10011673;
	scaffold43660	TRF	Tandem_Repeat	264161	264204	88	+	.	.
scaffold43660	subtractBed	intrn	265894	266855	.	-	.	Parent=CGI_10011673;
	scaffold43660	TRF	Tandem_Repeat	265894	266855	1053	+	.	.
scaffold43660	subtractBed	intrn	270661	271050	.	-	.	Parent=CGI_10011673;
	scaffold43660	WUBlastX	DNA_TcMar-Fot1	270661	271050	91	+	.	.
scaffold43660	subtractBed	intrn	270568	270978	.	-	.	Parent=CGI_10011673;
	scaffold43660	WUBlastX	DNA_TcMar-Fot1	270568	270978	97	+	.	.
scaffold43660	subtractBed	intrn	271367	271429	.	-	.	Parent=CGI_10011673;
	scaffold43660	WUBlastX	DNA_TcMar-Fot1	271367	271429	23	+	.	.
scaffold43660	subtractBed	intrn	286255	286329	.	+	.	Parent=CGI_10011674;
	scaffold43660	TRF	Tandem_Repeat	286255	286329	150	+	.	.
scaffold43662	subtractBed	intrn	283635	283680	.	+	.	Parent=CGI_10011612;
	scaffold43662	TRF	Tandem_Repeat	283635	283680	92	+	.	.
scaffold43662	subtractBed	intrn	283680	283723	.	+	.	Parent=CGI_10011612;
	scaffold43662	TRF	Tandem_Repeat	283680	283723	88	+	.	.
scaffold43664	subtractBed	intrn	68383	68450	.	-	.	Parent=CGI_10011707;
	scaffold43664	TRF	Tandem_Repeat	68383	68450	75	+	.	.
scaffold43664	subtractBed	intrn	68385	68450	.	-	.	Parent=CGI_10011707;
	scaffold43664	TRF	Tandem_Repeat	68385	68450	87	+	.	.
scaffold43664	subtractBed	intrn	115392	115573	.	+	.	Parent=CGI_10011710;
	scaffold43664	TRF	Tandem_Repeat	115392	115573	247	+	.	.
scaffold43664	subtractBed	intrn	116667	116705	.	+	.	Parent=CGI_10011710;
	scaffold43664	TRF	Tandem_Repeat	116667	116705	78	+	.	.
scaffold43664	subtractBed	intrn	117083	117129	.	+	.	Parent=CGI_10011710;
	scaffold43664	TRF	Tandem_Repeat	117083	117129	60	+	.	.
scaffold43664	subtractBed	intrn	120202	120249	.	+	.	Parent=CGI_10011710;
	scaffold43664	TRF	Tandem_Repeat	120202	120249	96	+	.	.
scaffold43664	subtractBed	intrn	130580	130664	.	+	.	Parent=CGI_10011711;
	scaffold43664	TRF	Tandem_Repeat	130580	130664	170	+	.	.
scaffold43664	subtractBed	intrn	149741	149952	.	-	.	Parent=CGI_10011712;
	scaffold43664	TRF	Tandem_Repeat	149741	149952	131	+	.	.
scaffold43664	subtractBed	intrn	149825	150030	.	-	.	Parent=CGI_10011712;
	scaffold43664	TRF	Tandem_Repeat	149825	150030	138	+	.	.
scaffold43664	subtractBed	intrn	151480	151506	.	-	.	Parent=CGI_10011712;
	scaffold43664	TRF	Tandem_Repeat	151480	151506	54	+	.	.
scaffold43664	subtractBed	intrn	165889	166312	.	+	.	Parent=CGI_10011713;
	scaffold43664	TRF	Tandem_Repeat	165889	166312	598	+	.	.
scaffold43664	subtractBed	intrn	172619	172945	.	+	.	Parent=CGI_10011713;
	scaffold43664	TRF	Tandem_Repeat	172619	172945	385	+	.	.
scaffold43664	subtractBed	intrn	181343	181553	.	+	.	Parent=CGI_10011713;
	scaffold43664	TRF	Tandem_Repeat	181309	181553	358	+	.	.
scaffold43664	subtractBed	intrn	213981	214649	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_RTE-X	213981	214649	136	+	.	.
scaffold43664	subtractBed	intrn	213794	213946	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_RTE-X	213794	213946	66	+	.	.
scaffold43664	subtractBed	intrn	213728	213916	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_L1-Tx1	213728	213916	36	+	.	.
scaffold43664	subtractBed	intrn	214197	214661	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_RTE-X	214197	214661	177	+	.	.
scaffold43664	subtractBed	intrn	214179	214898	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_RTE-X	214179	214898	97	+	.	.
scaffold43664	subtractBed	intrn	213931	214167	.	-	.	Parent=CGI_10011717;
	scaffold43664	WUBlastX	LINE_RTE-X	213931	214167	71	+	.	.
scaffold43664	subtractBed	intrn	255746	255897	.	+	.	Parent=CGI_10011721;
	scaffold43664	TRF	Tandem_Repeat	255746	255897	106	+	.	.
scaffold43664	subtractBed	intrn	255741	255897	.	+	.	Parent=CGI_10011721;
	scaffold43664	TRF	Tandem_Repeat	255741	255897	269	+	.	.
scaffold43664	subtractBed	intrn	272014	272318	.	-	.	Parent=CGI_10011723;
	scaffold43664	TRF	Tandem_Repeat	272014	272344	334	+	.	.
scaffold43664	subtractBed	intrn	272056	272318	.	-	.	Parent=CGI_10011723;
	scaffold43664	TRF	Tandem_Repeat	272056	272344	260	+	.	.
scaffold43664	subtractBed	intrn	284471	284511	.	-	.	Parent=CGI_10011723;
	scaffold43664	TRF	Tandem_Repeat	284471	284511	82	+	.	.
scaffold43664	subtractBed	intrn	290008	290081	.	+	.	Parent=CGI_10011724;
	scaffold43664	TRF	Tandem_Repeat	290008	290081	103	+	.	.
scaffold43676	subtractBed	intrn	63327	63359	.	-	.	Parent=CGI_10011729;
	scaffold43676	TRF	Tandem_Repeat	63327	63359	66	+	.	.
scaffold43676	subtractBed	intrn	73259	73363	.	-	.	Parent=CGI_10011729;
	scaffold43676	WUBlastX	LINE_RTE-X	73259	73363	29	+	.	.
scaffold43676	subtractBed	intrn	73375	73485	.	-	.	Parent=CGI_10011729;
	scaffold43676	WUBlastX	LINE_RTE-X	73375	73485	46	+	.	.
scaffold43676	subtractBed	intrn	105295	105360	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	105295	105360	123	+	.	.
scaffold43676	subtractBed	intrn	106106	106785	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	106106	106785	606	+	.	.
scaffold43676	subtractBed	intrn	106106	106785	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	106106	106785	550	+	.	.
scaffold43676	subtractBed	intrn	106106	106785	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	106106	106785	638	+	.	.
scaffold43676	subtractBed	intrn	112651	112703	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	112651	112703	106	+	.	.
scaffold43676	subtractBed	intrn	127709	127756	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	127709	127756	96	+	.	.
scaffold43676	subtractBed	intrn	139013	139075	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	139013	139075	63	+	.	.
scaffold43676	subtractBed	intrn	141607	142655	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	141593	142655	1507	+	.	.
scaffold43676	subtractBed	intrn	146683	146726	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	146683	146726	70	+	.	.
scaffold43676	subtractBed	intrn	149480	150622	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	149480	150622	1594	+	.	.
scaffold43676	subtractBed	intrn	146753	148144	.	+	.	Parent=CGI_10011731;
	scaffold43676	TRF	Tandem_Repeat	146753	148144	1996	+	.	.
scaffold43676	subtractBed	intrn	214646	214757	.	+	.	Parent=CGI_10011734;
	scaffold43676	WUBlastX	LINE_L2	214646	214963	68	+	.	.
scaffold43676	subtractBed	intrn	285545	285664	.	-	.	Parent=CGI_10011740;
	scaffold43676	TRF	Tandem_Repeat	285545	285664	213	+	.	.
scaffold43680	subtractBed	intrn	14224	14312	.	+	.	Parent=CGI_10011741;
	scaffold43680	TRF	Tandem_Repeat	14224	14312	115	+	.	.
scaffold43680	subtractBed	intrn	35308	35522	.	-	.	Parent=CGI_10011742;
	scaffold43680	TRF	Tandem_Repeat	35308	35522	403	+	.	.
scaffold43680	subtractBed	intrn	56968	57674	.	+	.	Parent=CGI_10011743;
	scaffold43680	TRF	Tandem_Repeat	56968	57674	1054	+	.	.
scaffold43680	subtractBed	intrn	194317	194596	.	-	.	Parent=CGI_10011748;
	scaffold43680	TRF	Tandem_Repeat	194317	194596	452	+	.	.
scaffold43680	subtractBed	intrn	239381	239682	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	239381	239682	203	+	.	.
scaffold43680	subtractBed	intrn	239381	239730	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	239381	239730	226	+	.	.
scaffold43680	subtractBed	intrn	239192	239730	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	239192	239730	537	+	.	.
scaffold43680	subtractBed	intrn	239339	239676	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	239339	239676	233	+	.	.
scaffold43680	subtractBed	intrn	240713	240765	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	240713	240765	99	+	.	.
scaffold43680	subtractBed	intrn	249225	249250	.	-	.	Parent=CGI_10011750;
	scaffold43680	TRF	Tandem_Repeat	249225	249250	52	+	.	.
scaffold43680	subtractBed	intrn	264694	264729	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	264694	264729	58	+	.	.
scaffold43680	subtractBed	intrn	268269	268331	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	268269	268331	126	+	.	.
scaffold43680	subtractBed	intrn	268434	268466	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	268434	268466	57	+	.	.
scaffold43680	subtractBed	intrn	276110	276163	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	276110	276163	63	+	.	.
scaffold43680	subtractBed	intrn	276116	276163	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	276116	276163	69	+	.	.
scaffold43680	subtractBed	intrn	280531	281477	.	+	.	Parent=CGI_10011752;
	scaffold43680	TRF	Tandem_Repeat	280531	281477	1314	+	.	.
scaffold43686	subtractBed	intrn	15381	15428	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_L1	15381	15428	21	-	.	.
scaffold43686	subtractBed	intrn	17581	17952	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1	17581	17952	56	-	.	.
scaffold43686	subtractBed	intrn	16854	17657	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1	16854	17657	372	-	.	.
scaffold43686	subtractBed	intrn	17581	17829	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1	17581	17829	121	-	.	.
scaffold43686	subtractBed	intrn	16492	16926	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1	16492	16926	437	-	.	.
scaffold43686	subtractBed	intrn	17593	17871	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1-L2	17593	17871	60	-	.	.
scaffold43686	subtractBed	intrn	15536	16489	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_CR1	15536	16489	742	-	.	.
scaffold43686	subtractBed	intrn	24193	24480	.	+	.	Parent=CGI_10011753;
	scaffold43686	WUBlastX	LINE_L1	24193	24480	119	-	.	.
scaffold43686	subtractBed	intrn	27305	27348	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	27305	27348	70	+	.	.
scaffold43686	subtractBed	intrn	27379	28172	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	27379	28172	1189	+	.	.
scaffold43686	subtractBed	intrn	29889	30304	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	29889	30304	354	+	.	.
scaffold43686	subtractBed	intrn	29868	29989	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	29868	29989	64	+	.	.
scaffold43686	subtractBed	intrn	29957	30304	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	29957	30304	444	+	.	.
scaffold43686	subtractBed	intrn	29958	30304	.	+	.	Parent=CGI_10011753;
	scaffold43686	TRF	Tandem_Repeat	29958	30304	543	+	.	.
scaffold43686	subtractBed	intrn	60272	60304	.	-	.	Parent=CGI_10011755;
	scaffold43686	TRF	Tandem_Repeat	60272	60304	50	+	.	.
scaffold43686	subtractBed	intrn	60304	60362	.	-	.	Parent=CGI_10011755;
	scaffold43686	TRF	Tandem_Repeat	60304	60362	118	+	.	.
scaffold43686	subtractBed	intrn	63755	63796	.	-	.	Parent=CGI_10011755;
	scaffold43686	TRF	Tandem_Repeat	63755	63796	66	+	.	.
scaffold43686	subtractBed	intrn	174847	175296	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LINE_L2	174847	175296	21	-	.	.
scaffold43686	subtractBed	intrn	175018	175206	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LINE_L2	175018	175206	70	-	.	.
scaffold43686	subtractBed	intrn	187073	187330	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	187073	187330	117	-	.	.
scaffold43686	subtractBed	intrn	187639	188532	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	187639	188532	22	-	.	.
scaffold43686	subtractBed	intrn	188392	188532	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	188392	188532	54	-	.	.
scaffold43686	subtractBed	intrn	188362	188532	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	188362	188532	31	-	.	.
scaffold43686	subtractBed	intrn	187639	188076	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	187639	188076	108	-	.	.
scaffold43686	subtractBed	intrn	187636	187923	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	187636	187923	118	-	.	.
scaffold43686	subtractBed	intrn	183554	183778	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	DNA_Zator	183554	183778	39	-	.	.
scaffold43686	subtractBed	intrn	183928	184116	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	DNA_Zator	183928	184116	90	-	.	.
scaffold43686	subtractBed	intrn	184098	185006	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	DNA_Zator	184098	185006	290	-	.	.
scaffold43686	subtractBed	intrn	185236	185982	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	DNA_Zator	185236	185982	126	-	.	.
scaffold43686	subtractBed	intrn	187115	187630	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	187115	187630	206	-	.	.
scaffold43686	subtractBed	intrn	185000	185242	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	DNA_Zator	185000	185242	83	-	.	.
scaffold43686	subtractBed	intrn	188594	188674	.	-	.	Parent=CGI_10011758;
	scaffold43686	WUBlastX	LTR_Gypsy	188594	188674	21	-	.	.
scaffold43686	subtractBed	intrn	236505	236573	.	-	.	Parent=CGI_10011759;
	scaffold43686	TRF	Tandem_Repeat	236505	236573	102	+	.	.
scaffold43686	subtractBed	intrn	258901	258946	.	-	.	Parent=CGI_10011760;
	scaffold43686	TRF	Tandem_Repeat	258901	258946	92	+	.	.
scaffold43686	subtractBed	intrn	259050	259094	.	-	.	Parent=CGI_10011760;
	scaffold43686	TRF	Tandem_Repeat	259050	259094	90	+	.	.
scaffold43692	subtractBed	intrn	17051	17092	.	-	.	Parent=CGI_10011808;
	scaffold43692	TRF	Tandem_Repeat	17051	17092	84	+	.	.
scaffold43692	subtractBed	intrn	30152	30194	.	-	.	Parent=CGI_10011809;
	scaffold43692	TRF	Tandem_Repeat	30152	30194	86	+	.	.
scaffold43692	subtractBed	intrn	30890	31031	.	-	.	Parent=CGI_10011809;
	scaffold43692	TRF	Tandem_Repeat	30890	31031	88	+	.	.
scaffold43692	subtractBed	intrn	47185	47540	.	-	.	Parent=CGI_10011810;
	scaffold43692	TRF	Tandem_Repeat	47185	47540	694	+	.	.
scaffold43692	subtractBed	intrn	209077	209120	.	+	.	Parent=CGI_10011818;
	scaffold43692	TRF	Tandem_Repeat	209077	209120	63	+	.	.
scaffold43692	subtractBed	intrn	211444	211482	.	+	.	Parent=CGI_10011818;
	scaffold43692	TRF	Tandem_Repeat	211444	211482	78	+	.	.
scaffold43692	subtractBed	intrn	211600	211659	.	+	.	Parent=CGI_10011818;
	scaffold43692	TRF	Tandem_Repeat	211600	211659	111	+	.	.
scaffold43692	subtractBed	intrn	267535	267578	.	+	.	Parent=CGI_10011823;
	scaffold43692	TRF	Tandem_Repeat	267535	267578	88	+	.	.
scaffold43692	subtractBed	intrn	267615	267655	.	+	.	Parent=CGI_10011823;
	scaffold43692	TRF	Tandem_Repeat	267615	267655	82	+	.	.
scaffold43692	subtractBed	intrn	285652	285691	.	-	.	Parent=CGI_10011825;
	scaffold43692	TRF	Tandem_Repeat	285652	285691	80	+	.	.
scaffold43696	subtractBed	intrn	3099	3911	.	+	.	Parent=CGI_10011797;
	scaffold43696	WUBlastX	LTR_Gypsy	3099	3911	134	+	.	.
scaffold43696	subtractBed	intrn	2874	3752	.	+	.	Parent=CGI_10011797;
	scaffold43696	WUBlastX	LTR_DIRS	2874	3752	629	+	.	.
scaffold43696	subtractBed	intrn	42020	42087	.	+	.	Parent=CGI_10011799;
	scaffold43696	TRF	Tandem_Repeat	42020	42087	118	+	.	.
scaffold43696	subtractBed	intrn	58226	58779	.	-	.	Parent=CGI_10011800;
	scaffold43696	TRF	Tandem_Repeat	58226	58779	929	+	.	.
scaffold43696	subtractBed	intrn	67760	68261	.	-	.	Parent=CGI_10011801;
	scaffold43696	TRF	Tandem_Repeat	67760	68261	731	+	.	.
scaffold43696	subtractBed	intrn	73754	73784	.	-	.	Parent=CGI_10011801;
	scaffold43696	TRF	Tandem_Repeat	73754	73784	53	+	.	.
scaffold43696	subtractBed	intrn	104929	104960	.	-	.	Parent=CGI_10011802;
	scaffold43696	TRF	Tandem_Repeat	104929	104960	64	+	.	.
scaffold43696	subtractBed	intrn	106536	106566	.	-	.	Parent=CGI_10011802;
	scaffold43696	TRF	Tandem_Repeat	106536	106566	62	+	.	.
scaffold43696	subtractBed	intrn	133008	133052	.	+	.	Parent=CGI_10011803;
	scaffold43696	TRF	Tandem_Repeat	133008	133052	90	+	.	.
scaffold43696	subtractBed	intrn	189624	189661	.	+	.	Parent=CGI_10011804;
	scaffold43696	TRF	Tandem_Repeat	189624	189661	76	+	.	.
scaffold43696	subtractBed	intrn	202671	202766	.	+	.	Parent=CGI_10011805;
	scaffold43696	WUBlastX	LTR_Gypsy	202671	202766	44	+	.	.
scaffold43696	subtractBed	intrn	202859	203065	.	+	.	Parent=CGI_10011805;
	scaffold43696	WUBlastX	LTR_Gypsy	202859	203065	63	+	.	.
scaffold43696	subtractBed	intrn	202604	203065	.	+	.	Parent=CGI_10011805;
	scaffold43696	WUBlastX	LTR_Gypsy	202604	203065	38	+	.	.
scaffold43696	subtractBed	intrn	206057	206084	.	+	.	Parent=CGI_10011805;
	scaffold43696	TRF	Tandem_Repeat	206057	206084	56	+	.	.
scaffold43702	subtractBed	intrn	12019	12066	.	+	.	Parent=CGI_10011897;
	scaffold43702	WUBlastX	DNA_hAT	10612	12066	475	-	.	.
scaffold43702	subtractBed	intrn	35942	36098	.	+	.	Parent=CGI_10011899;
	scaffold43702	TRF	Tandem_Repeat	35942	36098	221	+	.	.
scaffold43702	subtractBed	intrn	61755	61793	.	+	.	Parent=CGI_10011901;
	scaffold43702	TRF	Tandem_Repeat	61755	61793	78	+	.	.
scaffold43702	subtractBed	intrn	62504	62550	.	+	.	Parent=CGI_10011901;
	scaffold43702	TRF	Tandem_Repeat	62504	62550	94	+	.	.
scaffold43702	subtractBed	intrn	78279	78328	.	-	.	Parent=CGI_10011903;
	scaffold43702	TRF	Tandem_Repeat	78279	78328	57	+	.	.
scaffold43702	subtractBed	intrn	75655	76242	.	-	.	Parent=CGI_10011903;
	scaffold43702	WUBlastX	LINE_RTE-BovB	75655	76242	211	+	.	.
scaffold43702	subtractBed	intrn	80217	80966	.	-	.	Parent=CGI_10011903;
	scaffold43702	WUBlastX	LINE_RTE-X	80217	80966	168	-	.	.
scaffold43702	subtractBed	intrn	75811	76236	.	-	.	Parent=CGI_10011903;
	scaffold43702	WUBlastX	LINE_RTE-BovB	75811	76236	355	+	.	.
scaffold43702	subtractBed	intrn	75611	75799	.	-	.	Parent=CGI_10011903;
	scaffold43702	WUBlastX	LINE_RTE-BovB	75611	75799	138	+	.	.
scaffold43702	subtractBed	intrn	90369	90408	.	-	.	Parent=CGI_10011903;
	scaffold43702	TRF	Tandem_Repeat	90369	90408	71	+	.	.
scaffold43702	subtractBed	intrn	121532	121576	.	-	.	Parent=CGI_10011905;
	scaffold43702	TRF	Tandem_Repeat	121532	121576	83	+	.	.
scaffold43702	subtractBed	intrn	128408	128718	.	+	.	Parent=CGI_10011906;
	scaffold43702	TRF	Tandem_Repeat	128408	128718	595	+	.	.
scaffold43702	subtractBed	intrn	184569	184637	.	-	.	Parent=CGI_10011911;
	scaffold43702	TRF	Tandem_Repeat	184569	184637	131	+	.	.
scaffold43702	subtractBed	intrn	191939	191975	.	-	.	Parent=CGI_10011911;
	scaffold43702	TRF	Tandem_Repeat	191939	191975	74	+	.	.
scaffold43702	subtractBed	intrn	215347	215895	.	-	.	Parent=CGI_10011915;
	scaffold43702	WUBlastX	LINE_CR1	215269	215895	63	+	.	.
scaffold43702	subtractBed	intrn	215374	217032	.	-	.	Parent=CGI_10011915;
	scaffold43702	WUBlastX	LINE_RTE-X	215374	217032	242	+	.	.
scaffold43708	subtractBed	intrn	3177	3210	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	3177	3210	59	+	.	.
scaffold43708	subtractBed	intrn	3549	3853	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	3549	3853	477	+	.	.
scaffold43708	subtractBed	intrn	3955	4097	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	3955	4097	123	+	.	.
scaffold43708	subtractBed	intrn	15038	15089	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	15038	15089	50	+	.	.
scaffold43708	subtractBed	intrn	17379	17646	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	17379	17646	513	+	.	.
scaffold43708	subtractBed	intrn	18110	18434	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	18110	18434	374	+	.	.
scaffold43708	subtractBed	intrn	18119	18434	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	18119	18434	433	+	.	.
scaffold43708	subtractBed	intrn	19321	19391	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	19321	19391	79	+	.	.
scaffold43708	subtractBed	intrn	21244	21889	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	21244	21889	977	+	.	.
scaffold43708	subtractBed	intrn	21637	21732	.	-	.	Parent=CGI_10011964;
	scaffold43708	TRF	Tandem_Repeat	21637	21732	51	+	.	.
scaffold43708	subtractBed	intrn	30010	30107	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	30010	30107	70	+	.	.
scaffold43708	subtractBed	intrn	30061	30107	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	30061	30107	67	+	.	.
scaffold43708	subtractBed	intrn	32389	32455	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	32389	32455	84	+	.	.
scaffold43708	subtractBed	intrn	36555	36611	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	36555	36611	96	+	.	.
scaffold43708	subtractBed	intrn	37279	37317	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	37279	37317	78	+	.	.
scaffold43708	subtractBed	intrn	37715	37753	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	37715	37753	78	+	.	.
scaffold43708	subtractBed	intrn	39327	39372	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	39327	39372	83	+	.	.
scaffold43708	subtractBed	intrn	41782	41823	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	41782	41823	84	+	.	.
scaffold43708	subtractBed	intrn	41868	41912	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	41868	41912	90	+	.	.
scaffold43708	subtractBed	intrn	41951	41982	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	41951	41982	64	+	.	.
scaffold43708	subtractBed	intrn	43477	43509	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	43477	43509	59	+	.	.
scaffold43708	subtractBed	intrn	43631	43701	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	43631	43701	142	+	.	.
scaffold43708	subtractBed	intrn	46793	46908	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	46793	46908	214	+	.	.
scaffold43708	subtractBed	intrn	47310	47343	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	47310	47343	68	+	.	.
scaffold43708	subtractBed	intrn	47358	47393	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	47358	47393	63	+	.	.
scaffold43708	subtractBed	intrn	48422	48468	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	48422	48468	94	+	.	.
scaffold43708	subtractBed	intrn	48866	48914	.	-	.	Parent=CGI_10011965;
	scaffold43708	TRF	Tandem_Repeat	48866	48914	98	+	.	.
scaffold43708	subtractBed	intrn	71780	71973	.	+	.	Parent=CGI_10011967;
	scaffold43708	TRF	Tandem_Repeat	71780	71973	281	+	.	.
scaffold43708	subtractBed	intrn	72126	72237	.	+	.	Parent=CGI_10011967;
	scaffold43708	TRF	Tandem_Repeat	72126	72237	170	+	.	.
scaffold43708	subtractBed	intrn	75801	76199	.	+	.	Parent=CGI_10011967;
	scaffold43708	WUBlastX	DNA_Sola	75801	76199	103	+	.	.
scaffold43708	subtractBed	intrn	80824	81011	.	+	.	Parent=CGI_10011967;
	scaffold43708	TRF	Tandem_Repeat	80824	81011	324	+	.	.
scaffold43708	subtractBed	intrn	81460	82308	.	+	.	Parent=CGI_10011967;
	scaffold43708	WUBlastX	DNA_Sola	81460	82308	318	+	.	.
scaffold43708	subtractBed	intrn	131971	132642	.	+	.	Parent=CGI_10011970;
	scaffold43708	WUBlastX	LINE_CR1	131971	132642	170	-	.	.
scaffold43708	subtractBed	intrn	130729	132540	.	+	.	Parent=CGI_10011970;
	scaffold43708	WUBlastX	LINE_RTE-X	130729	132540	932	-	.	.
scaffold43708	subtractBed	intrn	133162	133186	.	+	.	Parent=CGI_10011970;
	scaffold43708	TRF	Tandem_Repeat	133162	133186	50	+	.	.
scaffold43708	subtractBed	intrn	133186	133248	.	+	.	Parent=CGI_10011970;
	scaffold43708	TRF	Tandem_Repeat	133186	133248	112	+	.	.
scaffold43708	subtractBed	intrn	132786	132805	.	+	.	Parent=CGI_10011970;
	scaffold43708	WUBlastX	LINE_CR1	132737	132805	20	-	.	.
scaffold43708	subtractBed	intrn	160105	160159	.	+	.	Parent=CGI_10011970;
	scaffold43708	TRF	Tandem_Repeat	160105	160159	110	+	.	.
scaffold43708	subtractBed	intrn	160314	160367	.	+	.	Parent=CGI_10011970;
	scaffold43708	TRF	Tandem_Repeat	160314	160367	108	+	.	.
scaffold43708	subtractBed	intrn	192006	192043	.	+	.	Parent=CGI_10011973;
	scaffold43708	TRF	Tandem_Repeat	192006	192043	58	+	.	.
scaffold43708	subtractBed	intrn	233379	233420	.	+	.	Parent=CGI_10011974;
	scaffold43708	TRF	Tandem_Repeat	233379	233420	84	+	.	.
scaffold43708	subtractBed	intrn	237762	238427	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_L2	237762	238427	293	-	.	.
scaffold43708	subtractBed	intrn	237017	237760	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_CR1-L2	237017	237760	293	-	.	.
scaffold43708	subtractBed	intrn	236971	237036	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_CR1-L2	236971	237036	23	-	.	.
scaffold43708	subtractBed	intrn	238080	238511	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_L2	238080	238511	201	-	.	.
scaffold43708	subtractBed	intrn	238086	238598	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_CR1	238086	238598	143	-	.	.
scaffold43708	subtractBed	intrn	239241	239300	.	+	.	Parent=CGI_10011974;
	scaffold43708	WUBlastX	LINE_L2	239241	239300	21	-	.	.
scaffold43708	subtractBed	intrn	240106	240150	.	+	.	Parent=CGI_10011974;
	scaffold43708	TRF	Tandem_Repeat	240106	240150	90	+	.	.
scaffold43708	subtractBed	intrn	271914	271960	.	+	.	Parent=CGI_10011976;
	scaffold43708	TRF	Tandem_Repeat	271914	271960	94	+	.	.
scaffold43726	subtractBed	intrn	151586	151635	.	-	.	Parent=CGI_10012023;
	scaffold43726	TRF	Tandem_Repeat	151586	151635	100	+	.	.
scaffold43726	subtractBed	intrn	155990	156022	.	-	.	Parent=CGI_10012023;
	scaffold43726	TRF	Tandem_Repeat	155990	156022	66	+	.	.
scaffold43726	subtractBed	intrn	161640	161832	.	-	.	Parent=CGI_10012023;
	scaffold43726	TRF	Tandem_Repeat	161640	161832	260	+	.	.
scaffold43726	subtractBed	intrn	160567	160752	.	-	.	Parent=CGI_10012023;
	scaffold43726	WUBlastX	LINE_RTE-X	160567	160752	93	-	.	.
scaffold43726	subtractBed	intrn	160480	160785	.	-	.	Parent=CGI_10012023;
	scaffold43726	WUBlastX	LINE_RTE-X	160480	160785	90	-	.	.
scaffold43726	subtractBed	intrn	157303	157434	.	-	.	Parent=CGI_10012023;
	scaffold43726	WUBlastX	LINE_RTE-X	157303	157434	70	+	.	.
scaffold43726	subtractBed	intrn	192881	193026	.	-	.	Parent=CGI_10012025;
	scaffold43726	TRF	Tandem_Repeat	192881	193026	109	+	.	.
scaffold43726	subtractBed	intrn	191235	192074	.	-	.	Parent=CGI_10012025;
	scaffold43726	WUBlastX	LINE_RTE-BovB	191235	192074	196	+	.	.
scaffold43726	subtractBed	intrn	193127	193339	.	-	.	Parent=CGI_10012025;
	scaffold43726	WUBlastX	LINE_RTE-X	193127	193339	38	+	.	.
scaffold43726	subtractBed	intrn	191418	192074	.	-	.	Parent=CGI_10012025;
	scaffold43726	WUBlastX	LINE_RTE-X	191418	192074	429	+	.	.
scaffold43726	subtractBed	intrn	193091	193216	.	-	.	Parent=CGI_10012025;
	scaffold43726	WUBlastX	LINE_RTE-X	193091	193216	46	+	.	.
scaffold43726	subtractBed	intrn	211625	211867	.	-	.	Parent=CGI_10012026;
	scaffold43726	WUBlastX	LINE_RTE-X	211625	211867	85	-	.	.
scaffold43726	subtractBed	intrn	216766	217934	.	-	.	Parent=CGI_10012026;
	scaffold43726	TRF	Tandem_Repeat	216766	217934	1136	+	.	.
scaffold43726	subtractBed	intrn	222955	223572	.	+	.	Parent=CGI_10012027;
	scaffold43726	WUBlastX	LINE_L2	222955	223572	211	-	.	.
scaffold43726	subtractBed	intrn	222679	223482	.	+	.	Parent=CGI_10012027;
	scaffold43726	WUBlastX	LINE_CR1-L2	222679	223482	95	-	.	.
scaffold43726	subtractBed	intrn	245910	245946	.	+	.	Parent=CGI_10012027;
	scaffold43726	TRF	Tandem_Repeat	245910	245946	74	+	.	.
scaffold43726	subtractBed	intrn	248724	248749	.	+	.	Parent=CGI_10012027;
	scaffold43726	TRF	Tandem_Repeat	248724	248749	52	+	.	.
scaffold43726	subtractBed	intrn	268426	268956	.	+	.	Parent=CGI_10012028;
	scaffold43726	WUBlastX	LINE_RTE-X	268426	268956	22	+	.	.
scaffold43726	subtractBed	intrn	268441	268614	.	+	.	Parent=CGI_10012028;
	scaffold43726	WUBlastX	LINE_RTE-X	268441	268614	83	+	.	.
scaffold43726	subtractBed	intrn	299638	299686	.	-	.	Parent=CGI_10012029;
	scaffold43726	TRF	Tandem_Repeat	299638	299686	71	+	.	.
scaffold43742	subtractBed	intrn	9410	9486	.	+	.	Parent=CGI_10012103;
	scaffold43742	TRF	Tandem_Repeat	9410	9486	98	+	.	.
scaffold43742	subtractBed	intrn	9412	9486	.	+	.	Parent=CGI_10012103;
	scaffold43742	TRF	Tandem_Repeat	9412	9486	113	+	.	.
scaffold43742	subtractBed	intrn	14181	14248	.	+	.	Parent=CGI_10012103;
	scaffold43742	TRF	Tandem_Repeat	14181	14248	57	+	.	.
scaffold43742	subtractBed	intrn	14282	14365	.	+	.	Parent=CGI_10012103;
	scaffold43742	TRF	Tandem_Repeat	14282	14365	80	+	.	.
scaffold43742	subtractBed	intrn	70795	71242	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	70795	71242	824	+	.	.
scaffold43742	subtractBed	intrn	107971	108718	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	107971	108718	842	+	.	.
scaffold43742	subtractBed	intrn	121037	121081	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	121037	121081	51	+	.	.
scaffold43742	subtractBed	intrn	130662	130930	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	130662	130930	198	+	.	.
scaffold43742	subtractBed	intrn	130682	130919	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	130682	130919	206	+	.	.
scaffold43742	subtractBed	intrn	130652	130901	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	130652	130901	339	+	.	.
scaffold43742	subtractBed	intrn	130652	130930	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	130652	130930	319	+	.	.
scaffold43742	subtractBed	intrn	130652	130895	.	-	.	Parent=CGI_10012107;
	scaffold43742	TRF	Tandem_Repeat	130652	130895	173	+	.	.
scaffold43742	subtractBed	intrn	137987	138044	.	-	.	Parent=CGI_10012109;
	scaffold43742	TRF	Tandem_Repeat	137987	138044	107	+	.	.
scaffold43742	subtractBed	intrn	147850	147906	.	-	.	Parent=CGI_10012110;
	scaffold43742	TRF	Tandem_Repeat	147850	147906	114	+	.	.
scaffold43742	subtractBed	intrn	151518	151574	.	-	.	Parent=CGI_10012110;
	scaffold43742	TRF	Tandem_Repeat	151518	151574	114	+	.	.
scaffold43742	subtractBed	intrn	208591	209005	.	+	.	Parent=CGI_10012113;
	scaffold43742	TRF	Tandem_Repeat	208591	209005	668	+	.	.
scaffold43742	subtractBed	intrn	208899	208996	.	+	.	Parent=CGI_10012113;
	scaffold43742	TRF	Tandem_Repeat	208899	208996	55	+	.	.
scaffold43742	subtractBed	intrn	209539	209567	.	+	.	Parent=CGI_10012113;
	scaffold43742	TRF	Tandem_Repeat	209539	209567	51	+	.	.
scaffold43742	subtractBed	intrn	211624	211666	.	+	.	Parent=CGI_10012113;
	scaffold43742	TRF	Tandem_Repeat	211624	211666	86	+	.	.
scaffold43742	subtractBed	intrn	261237	261277	.	+	.	Parent=CGI_10012118;
	scaffold43742	TRF	Tandem_Repeat	261237	261277	64	+	.	.
scaffold43742	subtractBed	intrn	267091	267456	.	+	.	Parent=CGI_10012118;
	scaffold43742	TRF	Tandem_Repeat	267091	267456	437	+	.	.
scaffold43742	subtractBed	intrn	267091	267456	.	+	.	Parent=CGI_10012118;
	scaffold43742	TRF	Tandem_Repeat	267091	267456	484	+	.	.
scaffold43742	subtractBed	intrn	268262	268617	.	+	.	Parent=CGI_10012118;
	scaffold43742	TRF	Tandem_Repeat	268262	268617	263	+	.	.
scaffold43764	subtractBed	intrn	56244	56752	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	56244	56752	532	+	.	.
scaffold43764	subtractBed	intrn	56244	56752	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	56244	56752	501	+	.	.
scaffold43764	subtractBed	intrn	58390	58577	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	58390	58577	178	+	.	.
scaffold43764	subtractBed	intrn	58251	58579	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	58251	58579	326	+	.	.
scaffold43764	subtractBed	intrn	58944	59430	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	58944	59430	582	+	.	.
scaffold43764	subtractBed	intrn	58840	59438	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	58840	59438	558	+	.	.
scaffold43764	subtractBed	intrn	61011	61251	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	61011	61251	312	+	.	.
scaffold43764	subtractBed	intrn	61438	62070	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	61438	62070	842	+	.	.
scaffold43764	subtractBed	intrn	64022	64356	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	64022	64356	330	+	.	.
scaffold43764	subtractBed	intrn	64022	64330	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	64022	64330	513	+	.	.
scaffold43764	subtractBed	intrn	73960	74042	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	73960	74042	148	+	.	.
scaffold43764	subtractBed	intrn	74397	75187	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	74397	75187	907	+	.	.
scaffold43764	subtractBed	intrn	82405	82832	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	82405	82832	743	+	.	.
scaffold43764	subtractBed	intrn	83621	83868	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	83621	83868	432	+	.	.
scaffold43764	subtractBed	intrn	101333	101645	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	101333	101645	478	+	.	.
scaffold43764	subtractBed	intrn	101269	101684	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	101269	101684	411	+	.	.
scaffold43764	subtractBed	intrn	102933	102983	.	+	.	Parent=CGI_10012176;
	scaffold43764	TRF	Tandem_Repeat	102933	102983	93	+	.	.
scaffold43764	subtractBed	intrn	117629	117666	.	-	.	Parent=CGI_10012178;
	scaffold43764	TRF	Tandem_Repeat	117629	117666	76	+	.	.
scaffold43764	subtractBed	intrn	141178	141437	.	-	.	Parent=CGI_10012179;
	scaffold43764	TRF	Tandem_Repeat	141178	141437	504	+	.	.
scaffold43764	subtractBed	intrn	142567	142593	.	-	.	Parent=CGI_10012179;
	scaffold43764	TRF	Tandem_Repeat	142567	142593	54	+	.	.
scaffold43764	subtractBed	intrn	142637	142661	.	-	.	Parent=CGI_10012179;
	scaffold43764	TRF	Tandem_Repeat	142637	142661	50	+	.	.
scaffold43764	subtractBed	intrn	154277	154306	.	-	.	Parent=CGI_10012180;
	scaffold43764	TRF	Tandem_Repeat	154277	154306	60	+	.	.
scaffold43764	subtractBed	intrn	172661	172691	.	-	.	Parent=CGI_10012181;
	scaffold43764	TRF	Tandem_Repeat	172661	172691	62	+	.	.
scaffold43764	subtractBed	intrn	182269	182338	.	-	.	Parent=CGI_10012181;
	scaffold43764	TRF	Tandem_Repeat	182269	182338	52	+	.	.
scaffold43764	subtractBed	intrn	182266	182339	.	-	.	Parent=CGI_10012181;
	scaffold43764	TRF	Tandem_Repeat	182266	182339	86	+	.	.
scaffold43764	subtractBed	intrn	182267	182328	.	-	.	Parent=CGI_10012181;
	scaffold43764	TRF	Tandem_Repeat	182267	182328	92	+	.	.
scaffold43764	subtractBed	intrn	183965	184004	.	-	.	Parent=CGI_10012181;
	scaffold43764	TRF	Tandem_Repeat	183965	184004	71	+	.	.
scaffold43764	subtractBed	intrn	208221	208267	.	+	.	Parent=CGI_10012182;
	scaffold43764	TRF	Tandem_Repeat	208221	208267	94	+	.	.
scaffold43764	subtractBed	intrn	217818	217870	.	+	.	Parent=CGI_10012183;
	scaffold43764	TRF	Tandem_Repeat	217818	217870	106	+	.	.
scaffold43764	subtractBed	intrn	217924	217959	.	+	.	Parent=CGI_10012183;
	scaffold43764	TRF	Tandem_Repeat	217924	217959	63	+	.	.
scaffold43764	subtractBed	intrn	238006	238052	.	+	.	Parent=CGI_10012183;
	scaffold43764	TRF	Tandem_Repeat	238006	238052	94	+	.	.
scaffold43772	subtractBed	intrn	120123	120165	.	-	.	Parent=CGI_10012273;
	scaffold43772	TRF	Tandem_Repeat	120123	120165	86	+	.	.
scaffold43772	subtractBed	intrn	125989	126046	.	-	.	Parent=CGI_10012274;
	scaffold43772	TRF	Tandem_Repeat	125989	126046	116	+	.	.
scaffold43772	subtractBed	intrn	185370	185395	.	+	.	Parent=CGI_10012276;
	scaffold43772	TRF	Tandem_Repeat	185370	185395	52	+	.	.
scaffold43772	subtractBed	intrn	208016	208070	.	+	.	Parent=CGI_10012276;
	scaffold43772	TRF	Tandem_Repeat	208016	208070	60	+	.	.
scaffold43772	subtractBed	intrn	231657	231713	.	-	.	Parent=CGI_10012278;
	scaffold43772	TRF	Tandem_Repeat	231657	231713	114	+	.	.
scaffold43772	subtractBed	intrn	233057	233101	.	-	.	Parent=CGI_10012278;
	scaffold43772	TRF	Tandem_Repeat	233057	233101	90	+	.	.
scaffold43782	subtractBed	intrn	63556	63582	.	+	.	Parent=CGI_10012361;
	scaffold43782	TRF	Tandem_Repeat	63556	63582	54	+	.	.
scaffold43782	subtractBed	intrn	88459	88492	.	+	.	Parent=CGI_10012363;
	scaffold43782	TRF	Tandem_Repeat	88459	88492	68	+	.	.
scaffold43782	subtractBed	intrn	88844	88885	.	+	.	Parent=CGI_10012363;
	scaffold43782	TRF	Tandem_Repeat	88844	88885	84	+	.	.
scaffold43782	subtractBed	intrn	92955	93033	.	+	.	Parent=CGI_10012364;
	scaffold43782	TRF	Tandem_Repeat	92955	93033	135	+	.	.
scaffold43782	subtractBed	intrn	97254	97299	.	-	.	Parent=CGI_10012365;
	scaffold43782	TRF	Tandem_Repeat	97254	97299	92	+	.	.
scaffold43782	subtractBed	intrn	100587	100617	.	-	.	Parent=CGI_10012365;
	scaffold43782	TRF	Tandem_Repeat	100587	100617	62	+	.	.
scaffold43782	subtractBed	intrn	114641	114676	.	+	.	Parent=CGI_10012366;
	scaffold43782	TRF	Tandem_Repeat	114641	114676	72	+	.	.
scaffold43782	subtractBed	intrn	112588	112815	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_R2	112588	112815	36	-	.	.
scaffold43782	subtractBed	intrn	112198	112746	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	112198	112746	193	-	.	.
scaffold43782	subtractBed	intrn	112327	112743	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	112327	112743	203	-	.	.
scaffold43782	subtractBed	intrn	113190	113471	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	113190	113471	182	-	.	.
scaffold43782	subtractBed	intrn	114028	114084	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_CR1-L2	114028	114084	21	-	.	.
scaffold43782	subtractBed	intrn	113130	113546	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	113130	113546	159	-	.	.
scaffold43782	subtractBed	intrn	113190	113612	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_L2	113190	113612	44	-	.	.
scaffold43782	subtractBed	intrn	112784	113173	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	112784	113173	218	-	.	.
scaffold43782	subtractBed	intrn	111476	112273	.	+	.	Parent=CGI_10012366;
	scaffold43782	WUBlastX	LINE_RTE-X	111476	112273	106	-	.	.
scaffold43782	subtractBed	intrn	119665	119712	.	+	.	Parent=CGI_10012366;
	scaffold43782	TRF	Tandem_Repeat	119665	119712	87	+	.	.
scaffold43782	subtractBed	intrn	144103	144312	.	+	.	Parent=CGI_10012367;
	scaffold43782	WUBlastX	LTR_DIRS	144103	144312	53	+	.	.
scaffold43782	subtractBed	intrn	245013	245045	.	-	.	Parent=CGI_10012370;
	scaffold43782	TRF	Tandem_Repeat	245013	245045	57	+	.	.
scaffold43782	subtractBed	intrn	245013	245045	.	+	.	Parent=CGI_10012371;
	scaffold43782	TRF	Tandem_Repeat	245013	245045	57	+	.	.
scaffold43782	subtractBed	intrn	252061	252112	.	+	.	Parent=CGI_10012371;
	scaffold43782	TRF	Tandem_Repeat	252061	252112	52	+	.	.
scaffold43782	subtractBed	intrn	251523	251840	.	+	.	Parent=CGI_10012371;
	scaffold43782	WUBlastX	LINE_RTE-X	251523	251840	39	+	.	.
scaffold43782	subtractBed	intrn	265354	265474	.	-	.	Parent=CGI_10012373;
	scaffold43782	TRF	Tandem_Repeat	265354	265474	188	+	.	.
scaffold43782	subtractBed	intrn	266544	266581	.	-	.	Parent=CGI_10012373;
	scaffold43782	TRF	Tandem_Repeat	266544	266581	76	+	.	.
scaffold43782	subtractBed	intrn	268060	268188	.	-	.	Parent=CGI_10012373;
	scaffold43782	TRF	Tandem_Repeat	268060	268188	103	+	.	.
scaffold43782	subtractBed	intrn	268050	268172	.	-	.	Parent=CGI_10012373;
	scaffold43782	TRF	Tandem_Repeat	268050	268172	185	+	.	.
scaffold43786	subtractBed	intrn	2531	2561	.	+	.	Parent=CGI_10012344;
	scaffold43786	TRF	Tandem_Repeat	2531	2561	55	+	.	.
scaffold43786	subtractBed	intrn	4154	4188	.	+	.	Parent=CGI_10012344;
	scaffold43786	TRF	Tandem_Repeat	4154	4188	52	+	.	.
scaffold43786	subtractBed	intrn	16550	16723	.	+	.	Parent=CGI_10012345;
	scaffold43786	TRF	Tandem_Repeat	16550	16723	138	+	.	.
scaffold43786	subtractBed	intrn	21269	21304	.	+	.	Parent=CGI_10012345;
	scaffold43786	TRF	Tandem_Repeat	21269	21304	54	+	.	.
scaffold43786	subtractBed	intrn	27346	27379	.	+	.	Parent=CGI_10012345;
	scaffold43786	TRF	Tandem_Repeat	27346	27379	68	+	.	.
scaffold43786	subtractBed	intrn	29438	29601	.	+	.	Parent=CGI_10012345;
	scaffold43786	TRF	Tandem_Repeat	29438	29601	195	+	.	.
scaffold43786	subtractBed	intrn	45373	45427	.	+	.	Parent=CGI_10012347;
	scaffold43786	TRF	Tandem_Repeat	45373	45427	110	+	.	.
scaffold43786	subtractBed	intrn	60100	60136	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	60100	60136	74	+	.	.
scaffold43786	subtractBed	intrn	102345	102523	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102345	102523	207	+	.	.
scaffold43786	subtractBed	intrn	102345	102558	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102345	102558	206	+	.	.
scaffold43786	subtractBed	intrn	102536	103264	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102536	103264	342	+	.	.
scaffold43786	subtractBed	intrn	102650	102826	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102650	102826	223	+	.	.
scaffold43786	subtractBed	intrn	102637	104259	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102637	104259	1941	+	.	.
scaffold43786	subtractBed	intrn	102837	103078	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	102837	103078	147	+	.	.
scaffold43786	subtractBed	intrn	103093	104284	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	103093	104284	889	+	.	.
scaffold43786	subtractBed	intrn	119944	119989	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	119944	119989	58	+	.	.
scaffold43786	subtractBed	intrn	119941	119990	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	119941	119990	66	+	.	.
scaffold43786	subtractBed	intrn	125038	125357	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	125038	125357	170	+	.	.
scaffold43786	subtractBed	intrn	125034	125231	.	-	.	Parent=CGI_10012348;
	scaffold43786	TRF	Tandem_Repeat	125034	125231	204	+	.	.
scaffold43786	subtractBed	intrn	185096	185125	.	+	.	Parent=CGI_10012352;
	scaffold43786	TRF	Tandem_Repeat	185096	185125	60	+	.	.
scaffold43786	subtractBed	intrn	212300	212342	.	+	.	Parent=CGI_10012353;
	scaffold43786	TRF	Tandem_Repeat	212300	212342	86	+	.	.
scaffold43786	subtractBed	intrn	228549	229832	.	-	.	Parent=CGI_10012355;
	scaffold43786	TRF	Tandem_Repeat	228549	229832	1641	+	.	.
scaffold43786	subtractBed	intrn	234650	234908	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	234650	234908	80	+	.	.
scaffold43786	subtractBed	intrn	235498	235827	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	235498	235827	391	+	.	.
scaffold43786	subtractBed	intrn	235498	235837	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	235498	235837	395	+	.	.
scaffold43786	subtractBed	intrn	241024	241059	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	241024	241059	72	+	.	.
scaffold43786	subtractBed	intrn	245944	245979	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	245944	245979	72	+	.	.
scaffold43786	subtractBed	intrn	249246	249443	.	-	.	Parent=CGI_10012356;
	scaffold43786	WUBlastX	LINE_L1-Tx1	249246	249443	123	-	.	.
scaffold43786	subtractBed	intrn	248047	249228	.	-	.	Parent=CGI_10012356;
	scaffold43786	WUBlastX	LINE_L1-Tx1	248047	249228	438	-	.	.
scaffold43786	subtractBed	intrn	249388	250305	.	-	.	Parent=CGI_10012356;
	scaffold43786	WUBlastX	LINE_L1-Tx1	249388	250305	554	-	.	.
scaffold43786	subtractBed	intrn	249436	250491	.	-	.	Parent=CGI_10012356;
	scaffold43786	WUBlastX	LINE_L1-Tx1	249436	250491	368	-	.	.
scaffold43786	subtractBed	intrn	252853	252904	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	252853	252904	90	+	.	.
scaffold43786	subtractBed	intrn	253007	253078	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	253007	253078	87	+	.	.
scaffold43786	subtractBed	intrn	253161	253214	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	253161	253214	87	+	.	.
scaffold43786	subtractBed	intrn	253163	253215	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	253163	253215	106	+	.	.
scaffold43786	subtractBed	intrn	260119	260156	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	260119	260156	76	+	.	.
scaffold43786	subtractBed	intrn	262141	262201	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	262141	262201	70	+	.	.
scaffold43786	subtractBed	intrn	274833	274878	.	-	.	Parent=CGI_10012356;
	scaffold43786	TRF	Tandem_Repeat	274833	274878	92	+	.	.
scaffold43786	subtractBed	intrn	279356	279446	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	279356	279446	182	+	.	.
scaffold43786	subtractBed	intrn	279948	279990	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	279948	279990	86	+	.	.
scaffold43786	subtractBed	intrn	278512	278587	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	278512	278587	92	+	.	.
scaffold43786	subtractBed	intrn	278512	278576	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	278512	278576	121	+	.	.
scaffold43786	subtractBed	intrn	283642	283675	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	283642	283675	59	+	.	.
scaffold43786	subtractBed	intrn	283881	283924	.	+	.	Parent=CGI_10012357;
	scaffold43786	TRF	Tandem_Repeat	283881	283924	54	+	.	.
scaffold43786	subtractBed	intrn	286370	286457	.	+	.	Parent=CGI_10012358;
	scaffold43786	TRF	Tandem_Repeat	286370	286457	176	+	.	.
scaffold43794	subtractBed	intrn	37971	38043	.	+	.	Parent=CGI_10012413;
	scaffold43794	TRF	Tandem_Repeat	37971	38043	146	+	.	.
scaffold43794	subtractBed	intrn	39741	39785	.	+	.	Parent=CGI_10012413;
	scaffold43794	TRF	Tandem_Repeat	39741	39785	90	+	.	.
scaffold43794	subtractBed	intrn	84076	84344	.	-	.	Parent=CGI_10012417;
	scaffold43794	TRF	Tandem_Repeat	84076	84344	375	+	.	.
scaffold43794	subtractBed	intrn	93921	94308	.	-	.	Parent=CGI_10012417;
	scaffold43794	TRF	Tandem_Repeat	93921	94308	650	+	.	.
scaffold43794	subtractBed	intrn	95938	96026	.	-	.	Parent=CGI_10012417;
	scaffold43794	TRF	Tandem_Repeat	95938	96026	54	+	.	.
scaffold43794	subtractBed	intrn	97162	97674	.	-	.	Parent=CGI_10012417;
	scaffold43794	WUBlastX	LINE_RTE-X	97162	97674	70	-	.	.
scaffold43794	subtractBed	intrn	97297	97785	.	-	.	Parent=CGI_10012417;
	scaffold43794	WUBlastX	LINE_RTE-X	97297	97785	86	-	.	.
scaffold43794	subtractBed	intrn	265901	265934	.	+	.	Parent=CGI_10012420;
	scaffold43794	TRF	Tandem_Repeat	265901	265934	52	+	.	.
scaffold43798	subtractBed	intrn	1019	1294	.	-	.	Parent=CGI_10012536;
	scaffold43798	WUBlastX	LINE_L1	1019	1294	20	-	.	.
scaffold43798	subtractBed	intrn	12150	12193	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	12150	12193	88	+	.	.
scaffold43798	subtractBed	intrn	16620	16726	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	16620	16726	92	+	.	.
scaffold43798	subtractBed	intrn	16586	17344	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	16586	17344	282	+	.	.
scaffold43798	subtractBed	intrn	20636	20692	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	20636	20692	75	+	.	.
scaffold43798	subtractBed	intrn	30826	30876	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	30826	30876	102	+	.	.
scaffold43798	subtractBed	intrn	35972	36038	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	35972	36038	89	+	.	.
scaffold43798	subtractBed	intrn	36554	36586	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	36554	36586	57	+	.	.
scaffold43798	subtractBed	intrn	39365	39431	.	-	.	Parent=CGI_10012536;
	scaffold43798	TRF	Tandem_Repeat	39365	39431	89	+	.	.
scaffold43798	subtractBed	intrn	187135	187284	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	187135	187284	88	+	.	.
scaffold43798	subtractBed	intrn	194266	194468	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	194266	194468	388	+	.	.
scaffold43798	subtractBed	intrn	194697	194756	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	194697	194756	102	+	.	.
scaffold43798	subtractBed	intrn	199190	199591	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	199190	199591	717	+	.	.
scaffold43798	subtractBed	intrn	199191	199591	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	199191	199591	743	+	.	.
scaffold43798	subtractBed	intrn	199190	199591	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	199190	199591	717	+	.	.
scaffold43798	subtractBed	intrn	203672	203711	.	-	.	Parent=CGI_10012539;
	scaffold43798	TRF	Tandem_Repeat	203672	203711	71	+	.	.
scaffold43798	subtractBed	intrn	212945	212975	.	+	.	Parent=CGI_10012540;
	scaffold43798	TRF	Tandem_Repeat	212945	212975	62	+	.	.
scaffold43798	subtractBed	intrn	214070	214415	.	+	.	Parent=CGI_10012540;
	scaffold43798	TRF	Tandem_Repeat	214070	214415	575	+	.	.
scaffold43798	subtractBed	intrn	218672	218734	.	-	.	Parent=CGI_10012541;
	scaffold43798	TRF	Tandem_Repeat	218672	218734	126	+	.	.
scaffold43798	subtractBed	intrn	223054	223182	.	-	.	Parent=CGI_10012541;
	scaffold43798	TRF	Tandem_Repeat	223054	223182	88	+	.	.
scaffold43798	subtractBed	intrn	223891	223928	.	-	.	Parent=CGI_10012541;
	scaffold43798	TRF	Tandem_Repeat	223891	223928	76	+	.	.
scaffold43798	subtractBed	intrn	224315	224360	.	-	.	Parent=CGI_10012541;
	scaffold43798	TRF	Tandem_Repeat	224315	224360	92	+	.	.
scaffold43798	subtractBed	intrn	256732	256768	.	+	.	Parent=CGI_10012542;
	scaffold43798	TRF	Tandem_Repeat	256732	256768	74	+	.	.
scaffold43798	subtractBed	intrn	257076	257130	.	+	.	Parent=CGI_10012542;
	scaffold43798	TRF	Tandem_Repeat	257076	257130	110	+	.	.
scaffold43798	subtractBed	intrn	275823	275868	.	-	.	Parent=CGI_10012543;
	scaffold43798	TRF	Tandem_Repeat	275823	275868	83	+	.	.
scaffold43798	subtractBed	intrn	279100	279181	.	-	.	Parent=CGI_10012543;
	scaffold43798	TRF	Tandem_Repeat	279100	279181	157	+	.	.
scaffold43798	subtractBed	intrn	288666	288805	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	288666	288805	226	+	.	.
scaffold43798	subtractBed	intrn	289837	289885	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	289837	289885	98	+	.	.
scaffold43798	subtractBed	intrn	294806	294876	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	294806	294876	124	+	.	.
scaffold43798	subtractBed	intrn	295942	295970	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	295942	295970	58	+	.	.
scaffold43798	subtractBed	intrn	300618	300676	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	300618	300676	118	+	.	.
scaffold43798	subtractBed	intrn	305702	306172	.	+	.	Parent=CGI_10012544;
	scaffold43798	TRF	Tandem_Repeat	305691	306172	489	+	.	.
scaffold43798	subtractBed	intrn	312595	312631	.	-	.	Parent=CGI_10012545;
	scaffold43798	TRF	Tandem_Repeat	312595	312631	74	+	.	.
scaffold43798	subtractBed	intrn	315865	315907	.	-	.	Parent=CGI_10012545;
	scaffold43798	TRF	Tandem_Repeat	315865	315907	86	+	.	.
scaffold43798	subtractBed	intrn	318934	319041	.	-	.	Parent=CGI_10012545;
	scaffold43798	TRF	Tandem_Repeat	318934	319041	139	+	.	.
scaffold43804	subtractBed	intrn	26414	26716	.	+	.	Parent=CGI_10012548;
	scaffold43804	WUBlastX	LINE_L1-Tx1	26414	26716	106	-	.	.
scaffold43804	subtractBed	intrn	107024	107092	.	+	.	Parent=CGI_10012550;
	scaffold43804	TRF	Tandem_Repeat	107024	107092	138	+	.	.
scaffold43804	subtractBed	intrn	117941	117972	.	+	.	Parent=CGI_10012551;
	scaffold43804	TRF	Tandem_Repeat	117941	117972	57	+	.	.
scaffold43804	subtractBed	intrn	137449	137736	.	-	.	Parent=CGI_10012553;
	scaffold43804	TRF	Tandem_Repeat	137449	137736	183	+	.	.
scaffold43804	subtractBed	intrn	137831	137927	.	-	.	Parent=CGI_10012553;
	scaffold43804	TRF	Tandem_Repeat	137831	137927	88	+	.	.
scaffold43804	subtractBed	intrn	140983	141046	.	-	.	Parent=CGI_10012553;
	scaffold43804	TRF	Tandem_Repeat	140983	141046	112	+	.	.
scaffold43804	subtractBed	intrn	192304	192679	.	+	.	Parent=CGI_10012557;
	scaffold43804	TRF	Tandem_Repeat	192304	192679	474	+	.	.
scaffold43804	subtractBed	intrn	193164	193955	.	+	.	Parent=CGI_10012557;
	scaffold43804	TRF	Tandem_Repeat	193164	193955	1142	+	.	.
scaffold43804	subtractBed	intrn	208107	208145	.	-	.	Parent=CGI_10012559;
	scaffold43804	WUBlastX	LINE_L2	208107	208580	91	+	.	.
scaffold43804	subtractBed	intrn	208223	208580	.	-	.	Parent=CGI_10012559;
	scaffold43804	WUBlastX	LINE_L2	208107	208580	91	+	.	.
scaffold43804	subtractBed	intrn	214528	214552	.	-	.	Parent=CGI_10012559;
	scaffold43804	TRF	Tandem_Repeat	214528	214552	50	+	.	.
scaffold43804	subtractBed	intrn	213118	214191	.	-	.	Parent=CGI_10012559;
	scaffold43804	WUBlastX	LINE_RTE-X	213118	214191	298	+	.	.
scaffold43804	subtractBed	intrn	241516	241571	.	-	.	Parent=CGI_10012562;
	scaffold43804	TRF	Tandem_Repeat	241516	241571	112	+	.	.
scaffold43804	subtractBed	intrn	244871	244925	.	-	.	Parent=CGI_10012562;
	scaffold43804	TRF	Tandem_Repeat	244871	244925	101	+	.	.
scaffold43818	subtractBed	intrn	49903	50115	.	-	.	Parent=CGI_10012756;
	scaffold43818	TRF	Tandem_Repeat	49903	50115	354	+	.	.
scaffold43818	subtractBed	intrn	50087	50820	.	-	.	Parent=CGI_10012756;
	scaffold43818	TRF	Tandem_Repeat	50087	50820	1155	+	.	.
scaffold43818	subtractBed	intrn	90231	90632	.	-	.	Parent=CGI_10012759;
	scaffold43818	TRF	Tandem_Repeat	90227	90632	695	+	.	.
scaffold43818	subtractBed	intrn	90599	90981	.	-	.	Parent=CGI_10012759;
	scaffold43818	TRF	Tandem_Repeat	90599	90981	273	+	.	.
scaffold43818	subtractBed	intrn	96121	96174	.	-	.	Parent=CGI_10012759;
	scaffold43818	TRF	Tandem_Repeat	96121	96174	108	+	.	.
scaffold43818	subtractBed	intrn	100008	100069	.	-	.	Parent=CGI_10012759;
	scaffold43818	TRF	Tandem_Repeat	100008	100069	124	+	.	.
scaffold43818	subtractBed	intrn	181555	181774	.	-	.	Parent=CGI_10012765;
	scaffold43818	TRF	Tandem_Repeat	181555	181774	323	+	.	.
scaffold43818	subtractBed	intrn	186568	187462	.	-	.	Parent=CGI_10012765;
	scaffold43818	TRF	Tandem_Repeat	186568	187462	1070	+	.	.
scaffold43818	subtractBed	intrn	192045	192114	.	+	.	Parent=CGI_10012766;
	scaffold43818	TRF	Tandem_Repeat	192045	192114	56	+	.	.
scaffold43818	subtractBed	intrn	192181	192235	.	+	.	Parent=CGI_10012766;
	scaffold43818	TRF	Tandem_Repeat	192181	192235	110	+	.	.
scaffold43818	subtractBed	intrn	192598	192647	.	+	.	Parent=CGI_10012766;
	scaffold43818	TRF	Tandem_Repeat	192598	192647	100	+	.	.
scaffold43818	subtractBed	intrn	192647	192686	.	+	.	Parent=CGI_10012766;
	scaffold43818	TRF	Tandem_Repeat	192647	192686	80	+	.	.
scaffold43818	subtractBed	intrn	202322	202402	.	+	.	Parent=CGI_10012766;
	scaffold43818	WUBlastX	DNA_TcMar-Marin	202322	202402	30	+	.	.
scaffold43818	subtractBed	intrn	202157	202408	.	+	.	Parent=CGI_10012766;
	scaffold43818	WUBlastX	DNA_TcMar-Marin	202157	202408	22	+	.	.
scaffold43818	subtractBed	intrn	216312	216375	.	-	.	Parent=CGI_10012767;
	scaffold43818	TRF	Tandem_Repeat	216312	216375	83	+	.	.
scaffold43818	subtractBed	intrn	266093	266142	.	+	.	Parent=CGI_10012774;
	scaffold43818	TRF	Tandem_Repeat	266093	266142	66	+	.	.
scaffold43818	subtractBed	intrn	266648	266701	.	+	.	Parent=CGI_10012774;
	scaffold43818	TRF	Tandem_Repeat	266648	266701	67	+	.	.
scaffold43818	subtractBed	intrn	266648	266701	.	+	.	Parent=CGI_10012774;
	scaffold43818	TRF	Tandem_Repeat	266648	266701	58	+	.	.
scaffold43818	subtractBed	intrn	266651	266696	.	+	.	Parent=CGI_10012774;
	scaffold43818	TRF	Tandem_Repeat	266651	266696	58	+	.	.
scaffold43818	subtractBed	intrn	276392	276826	.	+	.	Parent=CGI_10012774;
	scaffold43818	WUBlastX	DNA_TcMar-Marin	276392	276826	169	+	.	.
scaffold43818	subtractBed	intrn	276248	276805	.	+	.	Parent=CGI_10012774;
	scaffold43818	WUBlastX	DNA_TcMar-Marin	276248	276805	125	+	.	.
scaffold43818	subtractBed	intrn	276392	276973	.	+	.	Parent=CGI_10012774;
	scaffold43818	WUBlastX	DNA_TcMar-Marin	276392	276973	139	+	.	.
scaffold43818	subtractBed	intrn	266093	266142	.	-	.	Parent=CGI_10012775;
	scaffold43818	TRF	Tandem_Repeat	266093	266142	66	+	.	.
scaffold43818	subtractBed	intrn	266648	266701	.	-	.	Parent=CGI_10012775;
	scaffold43818	TRF	Tandem_Repeat	266648	266701	67	+	.	.
scaffold43818	subtractBed	intrn	266648	266701	.	-	.	Parent=CGI_10012775;
	scaffold43818	TRF	Tandem_Repeat	266648	266701	58	+	.	.
scaffold43818	subtractBed	intrn	266651	266696	.	-	.	Parent=CGI_10012775;
	scaffold43818	TRF	Tandem_Repeat	266651	266696	58	+	.	.
scaffold43818	subtractBed	intrn	321431	321904	.	+	.	Parent=CGI_10012777;
	scaffold43818	WUBlastX	LTR_Gypsy-Cigr	321431	321904	152	+	.	.
scaffold43818	subtractBed	intrn	321314	321757	.	+	.	Parent=CGI_10012777;
	scaffold43818	WUBlastX	LTR_Gypsy	321314	321757	74	+	.	.
scaffold43818	subtractBed	intrn	321605	322156	.	+	.	Parent=CGI_10012777;
	scaffold43818	WUBlastX	LTR_Gypsy	321605	322156	52	+	.	.
scaffold43818	subtractBed	intrn	321446	322069	.	+	.	Parent=CGI_10012777;
	scaffold43818	WUBlastX	LTR_Gypsy-Cigr	321446	322069	109	+	.	.
scaffold43818	subtractBed	intrn	329204	329668	.	+	.	Parent=CGI_10012778;
	scaffold43818	WUBlastX	LINE_RTE-X	329204	329668	187	+	.	.
scaffold43818	subtractBed	intrn	329099	329668	.	+	.	Parent=CGI_10012778;
	scaffold43818	WUBlastX	LINE_RTE-X	329099	329668	149	+	.	.
scaffold43818	subtractBed	intrn	329680	330288	.	+	.	Parent=CGI_10012778;
	scaffold43818	WUBlastX	LINE_RTE-X	329680	330288	221	+	.	.
scaffold43818	subtractBed	intrn	329055	329189	.	+	.	Parent=CGI_10012778;
	scaffold43818	WUBlastX	LINE_RTE-X	329055	329189	39	+	.	.
scaffold43818	subtractBed	intrn	330335	330691	.	+	.	Parent=CGI_10012778;
	scaffold43818	WUBlastX	LINE_RTE-X	330335	330691	50	+	.	.
scaffold43836	subtractBed	intrn	91396	91454	.	+	.	Parent=CGI_10013053;
	scaffold43836	TRF	Tandem_Repeat	91396	91454	118	+	.	.
scaffold43836	subtractBed	intrn	204958	205016	.	+	.	Parent=CGI_10013059;
	scaffold43836	TRF	Tandem_Repeat	204958	205016	118	+	.	.
scaffold43836	subtractBed	intrn	237003	237581	.	+	.	Parent=CGI_10013061;
	scaffold43836	TRF	Tandem_Repeat	237003	237581	448	+	.	.
scaffold43836	subtractBed	intrn	237265	237527	.	+	.	Parent=CGI_10013061;
	scaffold43836	TRF	Tandem_Repeat	237265	237527	187	+	.	.
scaffold43836	subtractBed	intrn	237442	237597	.	+	.	Parent=CGI_10013061;
	scaffold43836	TRF	Tandem_Repeat	237442	237597	125	+	.	.
scaffold43836	subtractBed	intrn	242211	242263	.	+	.	Parent=CGI_10013061;
	scaffold43836	TRF	Tandem_Repeat	242211	242263	106	+	.	.
scaffold43836	subtractBed	intrn	244388	245335	.	+	.	Parent=CGI_10013061;
	scaffold43836	WUBlastX	LINE_CR1	244388	245335	88	-	.	.
scaffold43836	subtractBed	intrn	243749	245176	.	+	.	Parent=CGI_10013061;
	scaffold43836	WUBlastX	LINE_RTE-X	243749	245176	499	-	.	.
scaffold43836	subtractBed	intrn	244388	245335	.	-	.	Parent=CGI_10013062;
	scaffold43836	WUBlastX	LINE_CR1	244388	245335	88	-	.	.
scaffold43836	subtractBed	intrn	243749	245176	.	-	.	Parent=CGI_10013062;
	scaffold43836	WUBlastX	LINE_RTE-X	243749	245176	499	-	.	.
scaffold43836	subtractBed	intrn	248848	249804	.	-	.	Parent=CGI_10013062;
	scaffold43836	WUBlastX	LINE_RTE-X	248848	249804	157	+	.	.
scaffold43836	subtractBed	intrn	248439	248681	.	-	.	Parent=CGI_10013062;
	scaffold43836	WUBlastX	LINE_RTE-X	248439	248681	120	+	.	.
scaffold43836	subtractBed	intrn	248636	248827	.	-	.	Parent=CGI_10013062;
	scaffold43836	WUBlastX	LINE_RTE-X	248636	248827	128	+	.	.
scaffold43836	subtractBed	intrn	259543	259609	.	-	.	Parent=CGI_10013064;
	scaffold43836	TRF	Tandem_Repeat	259543	259609	53	+	.	.
scaffold43836	subtractBed	intrn	261464	261498	.	-	.	Parent=CGI_10013064;
	scaffold43836	TRF	Tandem_Repeat	261464	261498	70	+	.	.
scaffold43842	subtractBed	intrn	2802	2854	.	-	.	Parent=CGI_10013092;
	scaffold43842	TRF	Tandem_Repeat	2802	2854	79	+	.	.
scaffold43842	subtractBed	intrn	12260	12316	.	+	.	Parent=CGI_10013093;
	scaffold43842	TRF	Tandem_Repeat	12260	12316	105	+	.	.
scaffold43842	subtractBed	intrn	24047	24087	.	-	.	Parent=CGI_10013094;
	scaffold43842	TRF	Tandem_Repeat	24047	24087	82	+	.	.
scaffold43842	subtractBed	intrn	24085	24125	.	-	.	Parent=CGI_10013094;
	scaffold43842	TRF	Tandem_Repeat	24085	24125	82	+	.	.
scaffold43842	subtractBed	intrn	28426	28851	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	28426	28851	525	+	.	.
scaffold43842	subtractBed	intrn	28506	28609	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	28506	28609	64	+	.	.
scaffold43842	subtractBed	intrn	28426	28819	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	28426	28819	519	+	.	.
scaffold43842	subtractBed	intrn	29227	29892	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	29227	29892	1118	+	.	.
scaffold43842	subtractBed	intrn	30930	31161	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	30930	31161	392	+	.	.
scaffold43842	subtractBed	intrn	36782	37851	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	36782	37851	1122	+	.	.
scaffold43842	subtractBed	intrn	38928	40433	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	38928	40433	2128	+	.	.
scaffold43842	subtractBed	intrn	39877	39961	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	39877	39961	52	+	.	.
scaffold43842	subtractBed	intrn	40101	40150	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	40101	40150	50	+	.	.
scaffold43842	subtractBed	intrn	42237	42519	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	42237	42519	471	+	.	.
scaffold43842	subtractBed	intrn	45479	45845	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	45479	45845	635	+	.	.
scaffold43842	subtractBed	intrn	47953	48452	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	47953	48452	501	+	.	.
scaffold43842	subtractBed	intrn	48152	48415	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	48152	48415	187	+	.	.
scaffold43842	subtractBed	intrn	48101	48556	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	48101	48556	382	+	.	.
scaffold43842	subtractBed	intrn	49949	50870	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	49924	50870	838	+	.	.
scaffold43842	subtractBed	intrn	51373	51808	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	51373	51808	710	+	.	.
scaffold43842	subtractBed	intrn	52673	52728	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	52673	52728	112	+	.	.
scaffold43842	subtractBed	intrn	53553	53933	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	53553	53933	439	+	.	.
scaffold43842	subtractBed	intrn	53530	53933	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	53530	53933	357	+	.	.
scaffold43842	subtractBed	intrn	56831	57324	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	56831	57324	362	+	.	.
scaffold43842	subtractBed	intrn	56845	57324	.	+	.	Parent=CGI_10013096;
	scaffold43842	TRF	Tandem_Repeat	56845	57324	498	+	.	.
scaffold43842	subtractBed	intrn	65738	65775	.	+	.	Parent=CGI_10013097;
	scaffold43842	TRF	Tandem_Repeat	65738	65775	76	+	.	.
scaffold43842	subtractBed	intrn	66033	66060	.	+	.	Parent=CGI_10013097;
	scaffold43842	TRF	Tandem_Repeat	66033	66060	56	+	.	.
scaffold43842	subtractBed	intrn	68053	68110	.	+	.	Parent=CGI_10013097;
	scaffold43842	TRF	Tandem_Repeat	68053	68110	116	+	.	.
scaffold43842	subtractBed	intrn	66542	66853	.	+	.	Parent=CGI_10013097;
	scaffold43842	WUBlastX	LINE_RTE-BovB	66542	66853	186	-	.	.
scaffold43842	subtractBed	intrn	76893	77091	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	76893	77091	344	+	.	.
scaffold43842	subtractBed	intrn	77320	77364	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	77320	77364	90	+	.	.
scaffold43842	subtractBed	intrn	90226	90386	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	90226	90386	173	+	.	.
scaffold43842	subtractBed	intrn	90226	90386	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	90226	90386	202	+	.	.
scaffold43842	subtractBed	intrn	95699	95761	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	95699	95761	126	+	.	.
scaffold43842	subtractBed	intrn	96581	97356	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	96581	97356	801	+	.	.
scaffold43842	subtractBed	intrn	96582	97353	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	96582	97353	586	+	.	.
scaffold43842	subtractBed	intrn	96581	97356	.	+	.	Parent=CGI_10013098;
	scaffold43842	TRF	Tandem_Repeat	96581	97356	778	+	.	.
scaffold43842	subtractBed	intrn	101226	102054	.	-	.	Parent=CGI_10013099;
	scaffold43842	TRF	Tandem_Repeat	101226	102054	850	+	.	.
scaffold43842	subtractBed	intrn	101247	102156	.	-	.	Parent=CGI_10013099;
	scaffold43842	TRF	Tandem_Repeat	101247	102156	373	+	.	.
scaffold43842	subtractBed	intrn	102230	102323	.	-	.	Parent=CGI_10013099;
	scaffold43842	TRF	Tandem_Repeat	102230	102323	64	+	.	.
scaffold43842	subtractBed	intrn	103783	103894	.	-	.	Parent=CGI_10013099;
	scaffold43842	TRF	Tandem_Repeat	103783	103894	152	+	.	.
scaffold43842	subtractBed	intrn	105976	106438	.	-	.	Parent=CGI_10013099;
	scaffold43842	TRF	Tandem_Repeat	105976	106438	793	+	.	.
scaffold43842	subtractBed	intrn	115923	115956	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	115923	115956	68	+	.	.
scaffold43842	subtractBed	intrn	115956	115995	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	115956	115995	80	+	.	.
scaffold43842	subtractBed	intrn	116610	116650	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	116610	116650	82	+	.	.
scaffold43842	subtractBed	intrn	117265	117316	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	117265	117316	104	+	.	.
scaffold43842	subtractBed	intrn	119695	119778	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	119695	119778	159	+	.	.
scaffold43842	subtractBed	intrn	121175	122145	.	+	.	Parent=CGI_10013100;
	scaffold43842	TRF	Tandem_Repeat	121175	122145	1621	+	.	.
scaffold43842	subtractBed	intrn	131115	131182	.	-	.	Parent=CGI_10013102;
	scaffold43842	TRF	Tandem_Repeat	130401	131182	1044	+	.	.
scaffold43842	subtractBed	intrn	133632	133671	.	-	.	Parent=CGI_10013102;
	scaffold43842	TRF	Tandem_Repeat	133632	133671	80	+	.	.
scaffold43842	subtractBed	intrn	138896	139658	.	-	.	Parent=CGI_10013102;
	scaffold43842	TRF	Tandem_Repeat	138896	139658	1040	+	.	.
scaffold43842	subtractBed	intrn	171996	172125	.	-	.	Parent=CGI_10013103;
	scaffold43842	TRF	Tandem_Repeat	171996	172125	137	+	.	.
scaffold43842	subtractBed	intrn	192147	192671	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_L2	192147	192671	91	-	.	.
scaffold43842	subtractBed	intrn	191790	192554	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_L2	191790	192554	273	-	.	.
scaffold43842	subtractBed	intrn	195593	195811	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_RTE-X	195593	195811	31	+	.	.
scaffold43842	subtractBed	intrn	195593	195772	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_RTE-X	195593	195772	47	+	.	.
scaffold43842	subtractBed	intrn	193262	193540	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_RTE-X	193262	193540	99	+	.	.
scaffold43842	subtractBed	intrn	193494	194351	.	+	.	Parent=CGI_10013104;
	scaffold43842	WUBlastX	LINE_RTE-X	193494	194351	359	+	.	.
scaffold43842	subtractBed	intrn	212604	212661	.	-	.	Parent=CGI_10013105;
	scaffold43842	TRF	Tandem_Repeat	212604	212661	57	+	.	.
scaffold43842	subtractBed	intrn	212625	212700	.	-	.	Parent=CGI_10013105;
	scaffold43842	TRF	Tandem_Repeat	212625	212700	63	+	.	.
scaffold43842	subtractBed	intrn	212605	212711	.	-	.	Parent=CGI_10013105;
	scaffold43842	TRF	Tandem_Repeat	212605	212711	60	+	.	.
scaffold43842	subtractBed	intrn	218788	219501	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_RTE-X	218788	219501	151	-	.	.
scaffold43842	subtractBed	intrn	219879	220829	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_RTE-X	219879	220829	643	-	.	.
scaffold43842	subtractBed	intrn	221138	221485	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_RTE-X	221138	221485	100	-	.	.
scaffold43842	subtractBed	intrn	221538	222101	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_RTE-X	221538	222101	182	-	.	.
scaffold43842	subtractBed	intrn	219427	219549	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_CR1	219427	219549	30	-	.	.
scaffold43842	subtractBed	intrn	219969	221180	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_RTE-X	219969	221180	210	-	.	.
scaffold43842	subtractBed	intrn	219624	220832	.	-	.	Parent=CGI_10013105;
	scaffold43842	WUBlastX	LINE_L2	219624	220832	104	-	.	.
scaffold43842	subtractBed	intrn	223132	223215	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	LINE_RTE-BovB	223132	223215	29	-	.	.
scaffold43842	subtractBed	intrn	234111	234145	.	-	.	Parent=CGI_10013106;
	scaffold43842	TRF	Tandem_Repeat	234111	234145	70	+	.	.
scaffold43842	subtractBed	intrn	241007	241046	.	-	.	Parent=CGI_10013106;
	scaffold43842	TRF	Tandem_Repeat	241007	241046	80	+	.	.
scaffold43842	subtractBed	intrn	248475	248834	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	248475	248834	50	+	.	.
scaffold43842	subtractBed	intrn	249359	249526	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	249359	249526	35	+	.	.
scaffold43842	subtractBed	intrn	249984	250190	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	249984	250190	104	+	.	.
scaffold43842	subtractBed	intrn	249984	250238	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	249984	250238	69	+	.	.
scaffold43842	subtractBed	intrn	249662	249715	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	249662	249715	29	+	.	.
scaffold43842	subtractBed	intrn	249721	249906	.	-	.	Parent=CGI_10013106;
	scaffold43842	WUBlastX	DNA_IS4EU	249721	249906	54	+	.	.
scaffold43842	subtractBed	intrn	241007	241046	.	+	.	Parent=CGI_10013107;
	scaffold43842	TRF	Tandem_Repeat	241007	241046	80	+	.	.
scaffold43842	subtractBed	intrn	248475	248834	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	248475	248834	50	+	.	.
scaffold43842	subtractBed	intrn	249359	249526	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	249359	249526	35	+	.	.
scaffold43842	subtractBed	intrn	249984	250190	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	249984	250190	104	+	.	.
scaffold43842	subtractBed	intrn	249984	250238	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	249984	250238	69	+	.	.
scaffold43842	subtractBed	intrn	249662	249715	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	249662	249715	29	+	.	.
scaffold43842	subtractBed	intrn	249721	249906	.	+	.	Parent=CGI_10013107;
	scaffold43842	WUBlastX	DNA_IS4EU	249721	249906	54	+	.	.
scaffold43842	subtractBed	intrn	257555	257678	.	+	.	Parent=CGI_10013107;
	scaffold43842	TRF	Tandem_Repeat	257555	257678	212	+	.	.
scaffold43842	subtractBed	intrn	259782	259889	.	+	.	Parent=CGI_10013107;
	scaffold43842	TRF	Tandem_Repeat	259782	259889	180	+	.	.
scaffold43842	subtractBed	intrn	260574	260805	.	+	.	Parent=CGI_10013107;
	scaffold43842	TRF	Tandem_Repeat	260574	260811	231	+	.	.
scaffold43842	subtractBed	intrn	260574	260805	.	-	.	Parent=CGI_10013108;
	scaffold43842	TRF	Tandem_Repeat	260574	260811	231	+	.	.
scaffold43842	subtractBed	intrn	265500	265737	.	-	.	Parent=CGI_10013108;
	scaffold43842	TRF	Tandem_Repeat	265500	265737	230	+	.	.
scaffold43842	subtractBed	intrn	269625	269672	.	-	.	Parent=CGI_10013108;
	scaffold43842	TRF	Tandem_Repeat	269625	269672	87	+	.	.
scaffold43842	subtractBed	intrn	283143	283201	.	-	.	Parent=CGI_10013110;
	scaffold43842	TRF	Tandem_Repeat	283143	283201	109	+	.	.
scaffold43842	subtractBed	intrn	285763	285904	.	-	.	Parent=CGI_10013110;
	scaffold43842	TRF	Tandem_Repeat	285763	285904	214	+	.	.
scaffold43842	subtractBed	intrn	283143	283201	.	+	.	Parent=CGI_10013111;
	scaffold43842	TRF	Tandem_Repeat	283143	283201	109	+	.	.
scaffold43842	subtractBed	intrn	285763	285904	.	+	.	Parent=CGI_10013111;
	scaffold43842	TRF	Tandem_Repeat	285763	285904	214	+	.	.
scaffold43844	subtractBed	intrn	31389	31486	.	+	.	Parent=CGI_10013142;
	scaffold43844	TRF	Tandem_Repeat	31389	31486	169	+	.	.
scaffold43844	subtractBed	intrn	141075	141106	.	+	.	Parent=CGI_10013147;
	scaffold43844	WUBlastX	RC_Helitron	141075	141296	31	+	.	.
scaffold43844	subtractBed	intrn	142653	142704	.	+	.	Parent=CGI_10013147;
	scaffold43844	TRF	Tandem_Repeat	142653	142704	54	+	.	.
scaffold43844	subtractBed	intrn	148168	148266	.	+	.	Parent=CGI_10013147;
	scaffold43844	TRF	Tandem_Repeat	148168	148266	67	+	.	.
scaffold43844	subtractBed	intrn	148167	148266	.	+	.	Parent=CGI_10013147;
	scaffold43844	TRF	Tandem_Repeat	148167	148266	78	+	.	.
scaffold43844	subtractBed	intrn	175501	175641	.	+	.	Parent=CGI_10013150;
	scaffold43844	TRF	Tandem_Repeat	175501	175641	90	+	.	.
scaffold43844	subtractBed	intrn	175543	175642	.	+	.	Parent=CGI_10013150;
	scaffold43844	TRF	Tandem_Repeat	175543	175642	182	+	.	.
scaffold43844	subtractBed	intrn	180186	180246	.	+	.	Parent=CGI_10013150;
	scaffold43844	TRF	Tandem_Repeat	180186	180246	122	+	.	.
scaffold43844	subtractBed	intrn	185088	185325	.	+	.	Parent=CGI_10013151;
	scaffold43844	TRF	Tandem_Repeat	185088	185325	228	+	.	.
scaffold43844	subtractBed	intrn	185089	185379	.	+	.	Parent=CGI_10013151;
	scaffold43844	TRF	Tandem_Repeat	185089	185379	241	+	.	.
scaffold43844	subtractBed	intrn	185214	185379	.	+	.	Parent=CGI_10013151;
	scaffold43844	TRF	Tandem_Repeat	185214	185379	142	+	.	.
scaffold43844	subtractBed	intrn	185935	186198	.	+	.	Parent=CGI_10013151;
	scaffold43844	WUBlastX	DNA_TcMar-Marin	185935	186198	116	+	.	.
scaffold43844	subtractBed	intrn	187252	187656	.	+	.	Parent=CGI_10013151;
	scaffold43844	WUBlastX	DNA_TcMar-Marin	187252	187656	230	+	.	.
scaffold43844	subtractBed	intrn	186729	187061	.	+	.	Parent=CGI_10013151;
	scaffold43844	WUBlastX	DNA_TcMar-Marin	186729	187061	243	+	.	.
scaffold43844	subtractBed	intrn	186675	187070	.	+	.	Parent=CGI_10013151;
	scaffold43844	WUBlastX	DNA_TcMar-Marin	186675	187070	189	+	.	.
scaffold43844	subtractBed	intrn	185935	186333	.	+	.	Parent=CGI_10013151;
	scaffold43844	WUBlastX	DNA_TcMar-Marin	185935	186333	96	+	.	.
scaffold43844	subtractBed	intrn	200028	200073	.	+	.	Parent=CGI_10013152;
	scaffold43844	TRF	Tandem_Repeat	200028	200073	92	+	.	.
scaffold43844	subtractBed	intrn	237323	237374	.	+	.	Parent=CGI_10013154;
	scaffold43844	TRF	Tandem_Repeat	237323	237374	50	+	.	.
scaffold43844	subtractBed	intrn	249262	249305	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	249262	249305	54	+	.	.
scaffold43844	subtractBed	intrn	257867	257969	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	257867	257969	71	+	.	.
scaffold43844	subtractBed	intrn	257839	258352	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	257839	258352	769	+	.	.
scaffold43844	subtractBed	intrn	268711	269335	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	268711	269335	957	+	.	.
scaffold43844	subtractBed	intrn	268711	269335	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	268711	269335	957	+	.	.
scaffold43844	subtractBed	intrn	271279	271353	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	271279	271353	100	+	.	.
scaffold43844	subtractBed	intrn	272122	272180	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	272122	272180	118	+	.	.
scaffold43844	subtractBed	intrn	273358	273394	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	273358	273394	74	+	.	.
scaffold43844	subtractBed	intrn	278483	278565	.	-	.	Parent=CGI_10013155;
	scaffold43844	TRF	Tandem_Repeat	278483	278565	166	+	.	.
scaffold43868	subtractBed	intrn	14621	14803	.	-	.	Parent=CGI_10013648;
	scaffold43868	WUBlastX	DNA_hAT	14621	15031	109	+	.	.
scaffold43868	subtractBed	intrn	15017	15031	.	-	.	Parent=CGI_10013648;
	scaffold43868	WUBlastX	DNA_hAT	14621	15031	109	+	.	.
scaffold43868	subtractBed	intrn	15414	15416	.	-	.	Parent=CGI_10013648;
	scaffold43868	WUBlastX	DNA_hAT	15414	15590	100	+	.	.
scaffold43868	subtractBed	intrn	16847	16854	.	-	.	Parent=CGI_10013648;
	scaffold43868	WUBlastX	DNA_hAT	16847	17023	150	+	.	.
scaffold43868	subtractBed	intrn	16728	16734	.	-	.	Parent=CGI_10013648;
	scaffold43868	WUBlastX	DNA_hAT	16516	16734	93	+	.	.
scaffold43868	subtractBed	intrn	14621	14803	.	+	.	Parent=CGI_10013649;
	scaffold43868	WUBlastX	DNA_hAT	14621	15031	109	+	.	.
scaffold43868	subtractBed	intrn	15017	15031	.	+	.	Parent=CGI_10013649;
	scaffold43868	WUBlastX	DNA_hAT	14621	15031	109	+	.	.
scaffold43868	subtractBed	intrn	15414	15416	.	+	.	Parent=CGI_10013649;
	scaffold43868	WUBlastX	DNA_hAT	15414	15590	100	+	.	.
scaffold43868	subtractBed	intrn	16847	16854	.	+	.	Parent=CGI_10013649;
	scaffold43868	WUBlastX	DNA_hAT	16847	17023	150	+	.	.
scaffold43868	subtractBed	intrn	16728	16734	.	+	.	Parent=CGI_10013649;
	scaffold43868	WUBlastX	DNA_hAT	16516	16734	93	+	.	.
scaffold43868	subtractBed	intrn	24038	24074	.	-	.	Parent=CGI_10013650;
	scaffold43868	TRF	Tandem_Repeat	24038	24074	74	+	.	.
scaffold43868	subtractBed	intrn	105664	105701	.	+	.	Parent=CGI_10013653;
	scaffold43868	TRF	Tandem_Repeat	105664	105701	67	+	.	.
scaffold43868	subtractBed	intrn	106575	106608	.	+	.	Parent=CGI_10013653;
	scaffold43868	TRF	Tandem_Repeat	106575	106608	68	+	.	.
scaffold43868	subtractBed	intrn	146630	146682	.	-	.	Parent=CGI_10013655;
	scaffold43868	TRF	Tandem_Repeat	146630	146682	52	+	.	.
scaffold43868	subtractBed	intrn	235125	235189	.	+	.	Parent=CGI_10013661;
	scaffold43868	TRF	Tandem_Repeat	235125	235189	121	+	.	.
scaffold43868	subtractBed	intrn	256515	256562	.	+	.	Parent=CGI_10013662;
	scaffold43868	TRF	Tandem_Repeat	256515	256562	96	+	.	.
scaffold43868	subtractBed	intrn	257991	258051	.	+	.	Parent=CGI_10013662;
	scaffold43868	TRF	Tandem_Repeat	257991	258051	113	+	.	.
scaffold43868	subtractBed	intrn	259419	259456	.	+	.	Parent=CGI_10013662;
	scaffold43868	TRF	Tandem_Repeat	259419	259456	51	+	.	.
scaffold43868	subtractBed	intrn	270954	270981	.	-	.	Parent=CGI_10013665;
	scaffold43868	TRF	Tandem_Repeat	270954	270981	56	+	.	.
scaffold43868	subtractBed	intrn	319441	319466	.	+	.	Parent=CGI_10013668;
	scaffold43868	TRF	Tandem_Repeat	319441	319466	52	+	.	.
scaffold43878	subtractBed	intrn	25651	25877	.	-	.	Parent=CGI_10013710;
	scaffold43878	TRF	Tandem_Repeat	25651	25877	96	+	.	.
scaffold43878	subtractBed	intrn	25962	26069	.	-	.	Parent=CGI_10013710;
	scaffold43878	TRF	Tandem_Repeat	25962	26069	55	+	.	.
scaffold43878	subtractBed	intrn	34233	34763	.	-	.	Parent=CGI_10013710;
	scaffold43878	WUBlastX	LINE_L1-Tx1	34233	34763	137	-	.	.
scaffold43878	subtractBed	intrn	33757	33948	.	-	.	Parent=CGI_10013710;
	scaffold43878	WUBlastX	LINE_L1-Tx1	33757	33948	24	-	.	.
scaffold43878	subtractBed	intrn	41142	41246	.	-	.	Parent=CGI_10013710;
	scaffold43878	TRF	Tandem_Repeat	41142	41246	174	+	.	.
scaffold43878	subtractBed	intrn	63504	63506	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	63192	63506	111	+	.	.
scaffold43878	subtractBed	intrn	63504	63518	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	63243	63518	150	+	.	.
scaffold43878	subtractBed	intrn	64474	64704	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	64474	64704	39	+	.	.
scaffold43878	subtractBed	intrn	63994	64176	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	63994	64176	60	+	.	.
scaffold43878	subtractBed	intrn	63792	63904	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	63635	63904	60	+	.	.
scaffold43878	subtractBed	intrn	64264	64476	.	+	.	Parent=CGI_10013712;
	scaffold43878	WUBlastX	DNA_Kolobok	64264	64476	27	+	.	.
scaffold43878	subtractBed	intrn	84100	84165	.	-	.	Parent=CGI_10013714;
	scaffold43878	TRF	Tandem_Repeat	84100	84165	87	+	.	.
scaffold43878	subtractBed	intrn	160073	160090	.	+	.	Parent=CGI_10013720;
	scaffold43878	WUBlastX	RC_Helitron	159839	160090	51	+	.	.
scaffold43878	subtractBed	intrn	237916	238007	.	-	.	Parent=CGI_10013724;
	scaffold43878	TRF	Tandem_Repeat	237916	238007	107	+	.	.
scaffold43878	subtractBed	intrn	238087	238222	.	-	.	Parent=CGI_10013724;
	scaffold43878	TRF	Tandem_Repeat	238087	238222	112	+	.	.
scaffold43878	subtractBed	intrn	238294	238400	.	-	.	Parent=CGI_10013724;
	scaffold43878	TRF	Tandem_Repeat	238294	238400	117	+	.	.
scaffold43878	subtractBed	intrn	238492	238585	.	-	.	Parent=CGI_10013724;
	scaffold43878	TRF	Tandem_Repeat	238492	238585	59	+	.	.
scaffold43878	subtractBed	intrn	281073	281120	.	-	.	Parent=CGI_10013726;
	scaffold43878	TRF	Tandem_Repeat	281073	281120	96	+	.	.
scaffold43878	subtractBed	intrn	335041	335377	.	+	.	Parent=CGI_10013732;
	scaffold43878	TRF	Tandem_Repeat	335041	335377	570	+	.	.
scaffold43878	subtractBed	intrn	335041	335377	.	+	.	Parent=CGI_10013732;
	scaffold43878	TRF	Tandem_Repeat	335041	335377	570	+	.	.
scaffold43878	subtractBed	intrn	336113	336147	.	+	.	Parent=CGI_10013732;
	scaffold43878	TRF	Tandem_Repeat	336113	336147	70	+	.	.
scaffold43878	subtractBed	intrn	351489	351533	.	+	.	Parent=CGI_10013732;
	scaffold43878	TRF	Tandem_Repeat	351489	351533	72	+	.	.
scaffold43878	subtractBed	intrn	351489	351536	.	+	.	Parent=CGI_10013732;
	scaffold43878	TRF	Tandem_Repeat	351489	351536	51	+	.	.
scaffold43894	subtractBed	intrn	9919	9950	.	+	.	Parent=CGI_10013874;
	scaffold43894	TRF	Tandem_Repeat	9919	9950	64	+	.	.
scaffold43894	subtractBed	intrn	12986	13023	.	+	.	Parent=CGI_10013874;
	scaffold43894	TRF	Tandem_Repeat	12986	13023	58	+	.	.
scaffold43894	subtractBed	intrn	13936	13982	.	+	.	Parent=CGI_10013874;
	scaffold43894	TRF	Tandem_Repeat	13936	13982	94	+	.	.
scaffold43894	subtractBed	intrn	35684	35860	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	35684	35860	214	+	.	.
scaffold43894	subtractBed	intrn	36148	36515	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	36148	36515	387	+	.	.
scaffold43894	subtractBed	intrn	36146	36515	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	36146	36515	487	+	.	.
scaffold43894	subtractBed	intrn	36146	36506	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	36146	36506	453	+	.	.
scaffold43894	subtractBed	intrn	37169	37488	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	37169	37488	334	+	.	.
scaffold43894	subtractBed	intrn	37163	37486	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	37163	37486	411	+	.	.
scaffold43894	subtractBed	intrn	37163	37486	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	37163	37486	378	+	.	.
scaffold43894	subtractBed	intrn	39944	39983	.	+	.	Parent=CGI_10013877;
	scaffold43894	TRF	Tandem_Repeat	39944	39983	80	+	.	.
scaffold43894	subtractBed	intrn	96329	96375	.	+	.	Parent=CGI_10013881;
	scaffold43894	TRF	Tandem_Repeat	96329	96375	94	+	.	.
scaffold43894	subtractBed	intrn	152184	152214	.	+	.	Parent=CGI_10013883;
	scaffold43894	TRF	Tandem_Repeat	152184	152214	62	+	.	.
scaffold43894	subtractBed	intrn	214178	214227	.	+	.	Parent=CGI_10013886;
	scaffold43894	TRF	Tandem_Repeat	214178	214227	100	+	.	.
scaffold43894	subtractBed	intrn	223536	223565	.	-	.	Parent=CGI_10013888;
	scaffold43894	TRF	Tandem_Repeat	223536	223565	60	+	.	.
scaffold43894	subtractBed	intrn	267325	267412	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	267325	267412	113	+	.	.
scaffold43894	subtractBed	intrn	267324	267412	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	267324	267412	133	+	.	.
scaffold43894	subtractBed	intrn	269170	269283	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	269170	269283	201	+	.	.
scaffold43894	subtractBed	intrn	271470	271506	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	271470	271506	74	+	.	.
scaffold43894	subtractBed	intrn	271705	271745	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	271705	271745	64	+	.	.
scaffold43894	subtractBed	intrn	271743	271780	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	271743	271780	76	+	.	.
scaffold43894	subtractBed	intrn	272271	272330	.	-	.	Parent=CGI_10013892;
	scaffold43894	TRF	Tandem_Repeat	272271	272330	75	+	.	.
scaffold43894	subtractBed	intrn	268229	268855	.	-	.	Parent=CGI_10013892;
	scaffold43894	WUBlastX	LINE_RTE-X	268229	268855	115	+	.	.
scaffold43920	subtractBed	intrn	53671	53714	.	+	.	Parent=CGI_10013987;
	scaffold43920	TRF	Tandem_Repeat	53671	53714	88	+	.	.
scaffold43920	subtractBed	intrn	57397	60831	.	+	.	Parent=CGI_10013987;
	scaffold43920	WUBlastX	LINE_L1-Tx1	57397	60831	1130	+	.	.
scaffold43920	subtractBed	intrn	55916	56587	.	+	.	Parent=CGI_10013987;
	scaffold43920	WUBlastX	LINE_CR1	55916	56587	196	+	.	.
scaffold43920	subtractBed	intrn	103014	103696	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	103014	103696	981	+	.	.
scaffold43920	subtractBed	intrn	103870	103896	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	103870	103896	54	+	.	.
scaffold43920	subtractBed	intrn	105234	105541	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	105234	105541	415	+	.	.
scaffold43920	subtractBed	intrn	115064	115188	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	115064	115188	85	+	.	.
scaffold43920	subtractBed	intrn	114629	115236	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	114629	115236	733	+	.	.
scaffold43920	subtractBed	intrn	114629	115226	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	114629	115226	781	+	.	.
scaffold43920	subtractBed	intrn	116069	116354	.	-	.	Parent=CGI_10013991;
	scaffold43920	TRF	Tandem_Repeat	116069	116354	146	+	.	.
scaffold43920	subtractBed	intrn	175545	176639	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	175545	176639	1124	+	.	.
scaffold43920	subtractBed	intrn	185242	185287	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	185242	185287	92	+	.	.
scaffold43920	subtractBed	intrn	186286	186329	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	186286	186329	63	+	.	.
scaffold43920	subtractBed	intrn	183485	183775	.	+	.	Parent=CGI_10013994;
	scaffold43920	WUBlastX	LINE_L1-Tx1	183485	183775	140	-	.	.
scaffold43920	subtractBed	intrn	183772	184209	.	+	.	Parent=CGI_10013994;
	scaffold43920	WUBlastX	LINE_L1-Tx1	183772	184209	173	-	.	.
scaffold43920	subtractBed	intrn	197016	197122	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	197016	197122	115	+	.	.
scaffold43920	subtractBed	intrn	197448	197721	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	197448	197721	107	+	.	.
scaffold43920	subtractBed	intrn	197450	197591	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	197450	197591	85	+	.	.
scaffold43920	subtractBed	intrn	197618	197725	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	197618	197725	126	+	.	.
scaffold43920	subtractBed	intrn	199432	199536	.	+	.	Parent=CGI_10013994;
	scaffold43920	TRF	Tandem_Repeat	199432	199536	70	+	.	.
scaffold43920	subtractBed	intrn	261043	261372	.	+	.	Parent=CGI_10013995;
	scaffold43920	WUBlastX	DNA_TcMar-Tc1	261043	261372	34	+	.	.
scaffold43920	subtractBed	intrn	261046	261288	.	+	.	Parent=CGI_10013995;
	scaffold43920	WUBlastX	DNA_TcMar-Tc1	261046	261288	36	+	.	.
scaffold43920	subtractBed	intrn	260886	261035	.	+	.	Parent=CGI_10013995;
	scaffold43920	WUBlastX	DNA_TcMar-Tc1	260886	261035	56	+	.	.
scaffold43920	subtractBed	intrn	287307	288014	.	+	.	Parent=CGI_10013997;
	scaffold43920	TRF	Tandem_Repeat	287307	288014	1220	+	.	.
scaffold43920	subtractBed	intrn	288023	288066	.	+	.	Parent=CGI_10013997;
	scaffold43920	TRF	Tandem_Repeat	288023	288066	61	+	.	.
scaffold43920	subtractBed	intrn	288020	288053	.	+	.	Parent=CGI_10013997;
	scaffold43920	TRF	Tandem_Repeat	288020	288053	59	+	.	.
scaffold43920	subtractBed	intrn	302995	303039	.	+	.	Parent=CGI_10013998;
	scaffold43920	TRF	Tandem_Repeat	302995	303039	90	+	.	.
scaffold43920	subtractBed	intrn	307722	308022	.	+	.	Parent=CGI_10013998;
	scaffold43920	WUBlastX	DNA_MuDR	307722	308309	44	+	.	.
scaffold43920	subtractBed	intrn	307962	308022	.	+	.	Parent=CGI_10013998;
	scaffold43920	WUBlastX	DNA_MuDR	307962	308426	66	+	.	.
scaffold43920	subtractBed	intrn	319512	319862	.	+	.	Parent=CGI_10013999;
	scaffold43920	WUBlastX	DNA_Harbinger	319512	319862	73	+	.	.
scaffold43920	subtractBed	intrn	329080	329304	.	-	.	Parent=CGI_10014000;
	scaffold43920	WUBlastX	LINE_L1-Tx1	329080	329304	50	-	.	.
scaffold43920	subtractBed	intrn	329323	329676	.	-	.	Parent=CGI_10014000;
	scaffold43920	WUBlastX	LINE_L1-Tx1	329323	329676	145	-	.	.
scaffold43920	subtractBed	intrn	329600	330397	.	-	.	Parent=CGI_10014000;
	scaffold43920	WUBlastX	LINE_L1-Tx1	329600	330397	463	-	.	.
scaffold43920	subtractBed	intrn	329678	330535	.	-	.	Parent=CGI_10014000;
	scaffold43920	WUBlastX	LINE_L1	329678	330535	207	-	.	.
scaffold43920	subtractBed	intrn	346880	347167	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	DNA_Kolobok	346880	347167	50	-	.	.
scaffold43920	subtractBed	intrn	346880	347080	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	DNA_Kolobok	346880	347080	65	-	.	.
scaffold43920	subtractBed	intrn	346883	347041	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	DNA_Kolobok	346883	347041	79	-	.	.
scaffold43920	subtractBed	intrn	347351	347539	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	DNA_Kolobok	347351	347539	50	-	.	.
scaffold43920	subtractBed	intrn	354017	354172	.	-	.	Parent=CGI_10014001;
	scaffold43920	TRF	Tandem_Repeat	354017	354172	140	+	.	.
scaffold43920	subtractBed	intrn	357992	358171	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	LINE_RTE-X	357992	358171	84	-	.	.
scaffold43920	subtractBed	intrn	357959	358171	.	-	.	Parent=CGI_10014001;
	scaffold43920	WUBlastX	LINE_RTE-X	357959	358171	70	-	.	.
scaffold43920	subtractBed	intrn	362303	362347	.	-	.	Parent=CGI_10014001;
	scaffold43920	TRF	Tandem_Repeat	362303	362347	54	+	.	.
scaffold43920	subtractBed	intrn	365537	365590	.	-	.	Parent=CGI_10014001;
	scaffold43920	TRF	Tandem_Repeat	365537	365590	108	+	.	.
scaffold43920	subtractBed	intrn	367177	367207	.	-	.	Parent=CGI_10014001;
	scaffold43920	TRF	Tandem_Repeat	367177	367207	62	+	.	.
scaffold43932	subtractBed	intrn	50928	51365	.	+	.	Parent=CGI_10014108;
	scaffold43932	TRF	Tandem_Repeat	50928	51365	398	+	.	.
scaffold43932	subtractBed	intrn	52615	52775	.	+	.	Parent=CGI_10014108;
	scaffold43932	TRF	Tandem_Repeat	52615	52775	250	+	.	.
scaffold43932	subtractBed	intrn	67022	67065	.	+	.	Parent=CGI_10014109;
	scaffold43932	TRF	Tandem_Repeat	67022	67065	72	+	.	.
scaffold43932	subtractBed	intrn	67111	67893	.	+	.	Parent=CGI_10014109;
	scaffold43932	TRF	Tandem_Repeat	67111	67893	902	+	.	.
scaffold43932	subtractBed	intrn	68852	68998	.	+	.	Parent=CGI_10014109;
	scaffold43932	TRF	Tandem_Repeat	68852	68998	73	+	.	.
scaffold43932	subtractBed	intrn	68914	69043	.	+	.	Parent=CGI_10014109;
	scaffold43932	TRF	Tandem_Repeat	68914	69043	93	+	.	.
scaffold43932	subtractBed	intrn	78105	78320	.	+	.	Parent=CGI_10014110;
	scaffold43932	WUBlastX	LINE_L2	78105	78320	22	+	.	.
scaffold43932	subtractBed	intrn	78335	78634	.	+	.	Parent=CGI_10014110;
	scaffold43932	WUBlastX	LINE_L2	78335	78634	68	+	.	.
scaffold43932	subtractBed	intrn	140910	141437	.	-	.	Parent=CGI_10014117;
	scaffold43932	TRF	Tandem_Repeat	140910	141437	648	+	.	.
scaffold43932	subtractBed	intrn	143744	143768	.	-	.	Parent=CGI_10014117;
	scaffold43932	TRF	Tandem_Repeat	143744	143768	50	+	.	.
scaffold43932	subtractBed	intrn	149450	149615	.	+	.	Parent=CGI_10014118;
	scaffold43932	TRF	Tandem_Repeat	149450	149615	149	+	.	.
scaffold43932	subtractBed	intrn	149429	149636	.	+	.	Parent=CGI_10014118;
	scaffold43932	TRF	Tandem_Repeat	149429	149636	362	+	.	.
scaffold43932	subtractBed	intrn	150273	150529	.	+	.	Parent=CGI_10014118;
	scaffold43932	TRF	Tandem_Repeat	150273	150529	264	+	.	.
scaffold43932	subtractBed	intrn	150273	150465	.	+	.	Parent=CGI_10014118;
	scaffold43932	TRF	Tandem_Repeat	150273	150465	165	+	.	.
scaffold43932	subtractBed	intrn	187304	188233	.	+	.	Parent=CGI_10014122;
	scaffold43932	WUBlastX	DNA_Crypton	187304	188233	225	+	.	.
scaffold43932	subtractBed	intrn	191409	192149	.	+	.	Parent=CGI_10014122;
	scaffold43932	WUBlastX	DNA_TcMar-Tc2	191409	192149	132	+	.	.
scaffold43932	subtractBed	intrn	192630	192917	.	+	.	Parent=CGI_10014122;
	scaffold43932	WUBlastX	DNA_TcMar-Tc2	192630	192917	40	+	.	.
scaffold43932	subtractBed	intrn	234126	234305	.	-	.	Parent=CGI_10014124;
	scaffold43932	TRF	Tandem_Repeat	234126	234315	199	+	.	.
scaffold43932	subtractBed	intrn	256387	256426	.	-	.	Parent=CGI_10014124;
	scaffold43932	TRF	Tandem_Repeat	256387	256426	80	+	.	.
scaffold43932	subtractBed	intrn	267150	267583	.	-	.	Parent=CGI_10014124;
	scaffold43932	TRF	Tandem_Repeat	267150	267583	382	+	.	.
scaffold43932	subtractBed	intrn	269138	269174	.	-	.	Parent=CGI_10014124;
	scaffold43932	TRF	Tandem_Repeat	269138	269174	74	+	.	.
scaffold43932	subtractBed	intrn	337356	337404	.	+	.	Parent=CGI_10014129;
	scaffold43932	TRF	Tandem_Repeat	337356	337404	62	+	.	.
scaffold43932	subtractBed	intrn	361520	361559	.	-	.	Parent=CGI_10014131;
	scaffold43932	TRF	Tandem_Repeat	361520	361559	80	+	.	.
scaffold43932	subtractBed	intrn	366445	367881	.	-	.	Parent=CGI_10014131;
	scaffold43932	WUBlastX	DNA_En-Spm	366445	367881	855	-	.	.
scaffold43932	subtractBed	intrn	366187	368007	.	-	.	Parent=CGI_10014131;
	scaffold43932	WUBlastX	DNA_En-Spm	366187	368007	808	-	.	.
scaffold43932	subtractBed	intrn	373050	373181	.	-	.	Parent=CGI_10014131;
	scaffold43932	TRF	Tandem_Repeat	373050	373181	74	+	.	.
scaffold43940	subtractBed	intrn	8825	8889	.	-	.	Parent=CGI_10014147;
	scaffold43940	TRF	Tandem_Repeat	8825	8889	112	+	.	.
scaffold43940	subtractBed	intrn	24346	24703	.	+	.	Parent=CGI_10014148;
	scaffold43940	TRF	Tandem_Repeat	24346	24703	420	+	.	.
scaffold43940	subtractBed	intrn	24346	24703	.	+	.	Parent=CGI_10014148;
	scaffold43940	TRF	Tandem_Repeat	24346	24703	467	+	.	.
scaffold43940	subtractBed	intrn	71564	72142	.	+	.	Parent=CGI_10014150;
	scaffold43940	TRF	Tandem_Repeat	71564	72142	600	+	.	.
scaffold43940	subtractBed	intrn	73387	74730	.	+	.	Parent=CGI_10014150;
	scaffold43940	TRF	Tandem_Repeat	73387	74730	2460	+	.	.
scaffold43940	subtractBed	intrn	75452	75843	.	+	.	Parent=CGI_10014150;
	scaffold43940	TRF	Tandem_Repeat	75452	75843	649	+	.	.
scaffold43940	subtractBed	intrn	75452	76443	.	+	.	Parent=CGI_10014150;
	scaffold43940	TRF	Tandem_Repeat	75452	76443	804	+	.	.
scaffold43940	subtractBed	intrn	75938	76443	.	+	.	Parent=CGI_10014150;
	scaffold43940	TRF	Tandem_Repeat	75938	76443	739	+	.	.
scaffold43940	subtractBed	intrn	79103	79426	.	+	.	Parent=CGI_10014150;
	scaffold43940	WUBlastX	RC_Helitron	79103	79426	34	-	.	.
scaffold43940	subtractBed	intrn	104254	104388	.	+	.	Parent=CGI_10014152;
	scaffold43940	TRF	Tandem_Repeat	104254	104388	225	+	.	.
scaffold43940	subtractBed	intrn	106775	107281	.	+	.	Parent=CGI_10014152;
	scaffold43940	TRF	Tandem_Repeat	106775	107281	538	+	.	.
scaffold43940	subtractBed	intrn	106798	107262	.	+	.	Parent=CGI_10014152;
	scaffold43940	TRF	Tandem_Repeat	106798	107262	623	+	.	.
scaffold43940	subtractBed	intrn	108658	108907	.	+	.	Parent=CGI_10014152;
	scaffold43940	TRF	Tandem_Repeat	108652	108907	415	+	.	.
scaffold43940	subtractBed	intrn	132573	132633	.	-	.	Parent=CGI_10014153;
	scaffold43940	TRF	Tandem_Repeat	132573	132633	95	+	.	.
scaffold43940	subtractBed	intrn	207093	207274	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	207093	207274	283	+	.	.
scaffold43940	subtractBed	intrn	209962	210118	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	209962	210118	133	+	.	.
scaffold43940	subtractBed	intrn	219604	220050	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	219604	220050	779	+	.	.
scaffold43940	subtractBed	intrn	220639	221054	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	220639	221054	388	+	.	.
scaffold43940	subtractBed	intrn	226327	226991	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	226327	226991	927	+	.	.
scaffold43940	subtractBed	intrn	228390	228588	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	228390	228588	150	+	.	.
scaffold43940	subtractBed	intrn	230204	231342	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	230204	231342	1751	+	.	.
scaffold43940	subtractBed	intrn	232812	233045	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	232812	233045	445	+	.	.
scaffold43940	subtractBed	intrn	242062	242478	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	242062	242478	613	+	.	.
scaffold43940	subtractBed	intrn	242561	243106	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	242561	243106	806	+	.	.
scaffold43940	subtractBed	intrn	245734	245826	.	-	.	Parent=CGI_10014158;
	scaffold43940	TRF	Tandem_Repeat	245734	245826	132	+	.	.
scaffold43940	subtractBed	intrn	272853	272884	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	272853	272884	64	+	.	.
scaffold43940	subtractBed	intrn	274123	274168	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	274123	274168	92	+	.	.
scaffold43940	subtractBed	intrn	274656	274731	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	274656	274731	152	+	.	.
scaffold43940	subtractBed	intrn	279813	279849	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	279813	279849	65	+	.	.
scaffold43940	subtractBed	intrn	280700	280744	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	280700	280744	90	+	.	.
scaffold43940	subtractBed	intrn	282241	282275	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	282241	282275	70	+	.	.
scaffold43940	subtractBed	intrn	285361	285806	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	285361	285806	840	+	.	.
scaffold43940	subtractBed	intrn	286183	286623	.	-	.	Parent=CGI_10014159;
	scaffold43940	TRF	Tandem_Repeat	286183	286623	502	+	.	.
scaffold43940	subtractBed	intrn	285361	285806	.	+	.	Parent=CGI_10014160;
	scaffold43940	TRF	Tandem_Repeat	285361	285806	840	+	.	.
scaffold43940	subtractBed	intrn	286183	286623	.	+	.	Parent=CGI_10014160;
	scaffold43940	TRF	Tandem_Repeat	286183	286623	502	+	.	.
scaffold43940	subtractBed	intrn	299886	299960	.	+	.	Parent=CGI_10014161;
	scaffold43940	WUBlastX	LINE_L1-Tx1	299886	299960	33	-	.	.
scaffold43940	subtractBed	intrn	300004	300186	.	+	.	Parent=CGI_10014161;
	scaffold43940	WUBlastX	LINE_L1-Tx1	300004	300186	47	-	.	.
scaffold43940	subtractBed	intrn	305998	306120	.	+	.	Parent=CGI_10014161;
	scaffold43940	TRF	Tandem_Repeat	305998	306120	119	+	.	.
scaffold43940	subtractBed	intrn	324047	324172	.	-	.	Parent=CGI_10014162;
	scaffold43940	TRF	Tandem_Repeat	324047	324172	234	+	.	.
scaffold43940	subtractBed	intrn	327481	327664	.	-	.	Parent=CGI_10014162;
	scaffold43940	TRF	Tandem_Repeat	327481	327664	359	+	.	.
scaffold43940	subtractBed	intrn	328159	328330	.	-	.	Parent=CGI_10014162;
	scaffold43940	TRF	Tandem_Repeat	328159	328330	274	+	.	.
scaffold43940	subtractBed	intrn	328336	328510	.	-	.	Parent=CGI_10014162;
	scaffold43940	TRF	Tandem_Repeat	328336	328510	149	+	.	.
scaffold43940	subtractBed	intrn	334984	335250	.	-	.	Parent=CGI_10014162;
	scaffold43940	WUBlastX	LINE_RTE-X	334984	335250	49	-	.	.
scaffold43940	subtractBed	intrn	334827	334925	.	-	.	Parent=CGI_10014162;
	scaffold43940	WUBlastX	LINE_RTE-X	334827	334925	43	-	.	.
scaffold43940	subtractBed	intrn	344259	344321	.	-	.	Parent=CGI_10014162;
	scaffold43940	TRF	Tandem_Repeat	344259	344321	126	+	.	.
scaffold43954	subtractBed	intrn	16860	16909	.	-	.	Parent=CGI_10014569;
	scaffold43954	TRF	Tandem_Repeat	16860	16909	73	+	.	.
scaffold43954	subtractBed	intrn	16860	16923	.	-	.	Parent=CGI_10014569;
	scaffold43954	TRF	Tandem_Repeat	16860	16923	67	+	.	.
scaffold43954	subtractBed	intrn	24159	24253	.	-	.	Parent=CGI_10014569;
	scaffold43954	TRF	Tandem_Repeat	24159	24253	95	+	.	.
scaffold43954	subtractBed	intrn	58915	59296	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	58915	59296	683	+	.	.
scaffold43954	subtractBed	intrn	63050	63217	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	63050	63217	212	+	.	.
scaffold43954	subtractBed	intrn	70884	71013	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	70884	71013	84	+	.	.
scaffold43954	subtractBed	intrn	70929	71075	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	70929	71075	64	+	.	.
scaffold43954	subtractBed	intrn	72027	72896	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	72027	72896	1232	+	.	.
scaffold43954	subtractBed	intrn	73034	73071	.	-	.	Parent=CGI_10014571;
	scaffold43954	TRF	Tandem_Repeat	73034	73071	60	+	.	.
scaffold43954	subtractBed	intrn	101642	101810	.	-	.	Parent=CGI_10014574;
	scaffold43954	TRF	Tandem_Repeat	101642	101810	311	+	.	.
scaffold43954	subtractBed	intrn	146684	146941	.	-	.	Parent=CGI_10014576;
	scaffold43954	WUBlastX	LINE_CR1	146684	146941	36	+	.	.
scaffold43954	subtractBed	intrn	146536	146661	.	-	.	Parent=CGI_10014576;
	scaffold43954	WUBlastX	LINE_CR1	146536	146661	39	+	.	.
scaffold43954	subtractBed	intrn	146684	146836	.	-	.	Parent=CGI_10014576;
	scaffold43954	WUBlastX	LINE_CR1	146684	146836	40	+	.	.
scaffold43954	subtractBed	intrn	146642	146842	.	-	.	Parent=CGI_10014576;
	scaffold43954	WUBlastX	LINE_CR1	146642	146842	40	+	.	.
scaffold43954	subtractBed	intrn	149535	149647	.	-	.	Parent=CGI_10014576;
	scaffold43954	TRF	Tandem_Repeat	149535	149647	72	+	.	.
scaffold43954	subtractBed	intrn	149552	149654	.	-	.	Parent=CGI_10014576;
	scaffold43954	TRF	Tandem_Repeat	149552	149654	99	+	.	.
scaffold43954	subtractBed	intrn	192801	192840	.	+	.	Parent=CGI_10014580;
	scaffold43954	TRF	Tandem_Repeat	192801	192840	80	+	.	.
scaffold43954	subtractBed	intrn	190259	190888	.	+	.	Parent=CGI_10014580;
	scaffold43954	WUBlastX	DNA_TcMar-Tc1	190259	190888	47	-	.	.
scaffold43954	subtractBed	intrn	190268	190501	.	+	.	Parent=CGI_10014580;
	scaffold43954	WUBlastX	DNA_TcMar-Tc1	190268	190501	75	-	.	.
scaffold43954	subtractBed	intrn	277771	277820	.	+	.	Parent=CGI_10014581;
	scaffold43954	TRF	Tandem_Repeat	277771	277820	66	+	.	.
scaffold43954	subtractBed	intrn	335024	335032	.	+	.	Parent=CGI_10014586;
	scaffold43954	WUBlastX	DNA_MuDR	334763	335032	82	+	.	.
scaffold43954	subtractBed	intrn	335024	335029	.	+	.	Parent=CGI_10014586;
	scaffold43954	WUBlastX	DNA_MuDR	334616	335029	41	+	.	.
scaffold43954	subtractBed	intrn	335024	335170	.	+	.	Parent=CGI_10014586;
	scaffold43954	WUBlastX	DNA_MuDR	334817	335170	49	+	.	.
scaffold43954	subtractBed	intrn	337609	337639	.	+	.	Parent=CGI_10014587;
	scaffold43954	TRF	Tandem_Repeat	337609	337639	62	+	.	.
scaffold43954	subtractBed	intrn	366063	366095	.	-	.	Parent=CGI_10014588;
	scaffold43954	TRF	Tandem_Repeat	366063	366095	57	+	.	.
scaffold43954	subtractBed	intrn	366040	366093	.	-	.	Parent=CGI_10014588;
	scaffold43954	TRF	Tandem_Repeat	366040	366093	54	+	.	.
scaffold43954	subtractBed	intrn	368969	368997	.	-	.	Parent=CGI_10014588;
	scaffold43954	TRF	Tandem_Repeat	368969	368997	58	+	.	.
scaffold43956	subtractBed	intrn	31202	31285	.	-	.	Parent=CGI_10014619;
	scaffold43956	TRF	Tandem_Repeat	31202	31285	150	+	.	.
scaffold43956	subtractBed	intrn	175677	176514	.	-	.	Parent=CGI_10014623;
	scaffold43956	TRF	Tandem_Repeat	175677	176514	1182	+	.	.
scaffold43956	subtractBed	intrn	176525	176575	.	-	.	Parent=CGI_10014623;
	scaffold43956	TRF	Tandem_Repeat	176525	176575	84	+	.	.
scaffold43956	subtractBed	intrn	180725	180877	.	-	.	Parent=CGI_10014624;
	scaffold43956	TRF	Tandem_Repeat	180725	180891	199	+	.	.
scaffold43956	subtractBed	intrn	185795	186277	.	-	.	Parent=CGI_10014624;
	scaffold43956	TRF	Tandem_Repeat	185795	186277	518	+	.	.
scaffold43956	subtractBed	intrn	187551	189492	.	-	.	Parent=CGI_10014624;
	scaffold43956	TRF	Tandem_Repeat	187551	189492	2154	+	.	.
scaffold43956	subtractBed	intrn	190240	190588	.	-	.	Parent=CGI_10014624;
	scaffold43956	TRF	Tandem_Repeat	190240	190588	270	+	.	.
scaffold43956	subtractBed	intrn	199491	199542	.	+	.	Parent=CGI_10014625;
	scaffold43956	TRF	Tandem_Repeat	199491	199542	97	+	.	.
scaffold43956	subtractBed	intrn	209964	210160	.	-	.	Parent=CGI_10014626;
	scaffold43956	TRF	Tandem_Repeat	209964	210160	187	+	.	.
scaffold43956	subtractBed	intrn	227342	227372	.	-	.	Parent=CGI_10014626;
	scaffold43956	TRF	Tandem_Repeat	227342	227372	55	+	.	.
scaffold43956	subtractBed	intrn	244379	244403	.	-	.	Parent=CGI_10014626;
	scaffold43956	TRF	Tandem_Repeat	244379	244403	50	+	.	.
scaffold43956	subtractBed	intrn	278598	278668	.	+	.	Parent=CGI_10014630;
	scaffold43956	TRF	Tandem_Repeat	278598	278668	142	+	.	.
scaffold43956	subtractBed	intrn	279052	279801	.	+	.	Parent=CGI_10014630;
	scaffold43956	TRF	Tandem_Repeat	279027	279801	183	+	.	.
scaffold43956	subtractBed	intrn	279234	279817	.	+	.	Parent=CGI_10014630;
	scaffold43956	TRF	Tandem_Repeat	279234	279817	740	+	.	.
scaffold43956	subtractBed	intrn	279157	279829	.	+	.	Parent=CGI_10014630;
	scaffold43956	TRF	Tandem_Repeat	279157	279829	713	+	.	.
scaffold43956	subtractBed	intrn	281947	282117	.	+	.	Parent=CGI_10014630;
	scaffold43956	TRF	Tandem_Repeat	281947	282117	261	+	.	.
scaffold43956	subtractBed	intrn	293341	293380	.	-	.	Parent=CGI_10014631;
	scaffold43956	TRF	Tandem_Repeat	293341	293380	80	+	.	.
scaffold43956	subtractBed	intrn	295725	296312	.	-	.	Parent=CGI_10014631;
	scaffold43956	TRF	Tandem_Repeat	295725	296312	164	+	.	.
scaffold43956	subtractBed	intrn	306012	306043	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	306012	306043	57	+	.	.
scaffold43956	subtractBed	intrn	306212	306258	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	306212	306258	58	+	.	.
scaffold43956	subtractBed	intrn	311422	311615	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	311422	311615	298	+	.	.
scaffold43956	subtractBed	intrn	311247	311400	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	311215	311400	331	+	.	.
scaffold43956	subtractBed	intrn	322218	322592	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	322218	322592	651	+	.	.
scaffold43956	subtractBed	intrn	326095	326297	.	+	.	Parent=CGI_10014632;
	scaffold43956	TRF	Tandem_Repeat	326095	326297	399	+	.	.
scaffold43956	subtractBed	intrn	345167	346815	.	-	.	Parent=CGI_10014634;
	scaffold43956	TRF	Tandem_Repeat	345167	346815	2423	+	.	.
scaffold43956	subtractBed	intrn	355985	356030	.	-	.	Parent=CGI_10014634;
	scaffold43956	TRF	Tandem_Repeat	355985	356030	92	+	.	.
scaffold43956	subtractBed	intrn	356534	356873	.	-	.	Parent=CGI_10014634;
	scaffold43956	TRF	Tandem_Repeat	356534	356873	626	+	.	.
scaffold43956	subtractBed	intrn	359922	360148	.	-	.	Parent=CGI_10014634;
	scaffold43956	TRF	Tandem_Repeat	359922	360148	93	+	.	.
scaffold43956	subtractBed	intrn	360528	360626	.	-	.	Parent=CGI_10014634;
	scaffold43956	TRF	Tandem_Repeat	360528	360626	180	+	.	.
scaffold43964	subtractBed	intrn	20782	20828	.	+	.	Parent=CGI_10014635;
	scaffold43964	TRF	Tandem_Repeat	20782	20828	94	+	.	.
scaffold43964	subtractBed	intrn	84196	84227	.	+	.	Parent=CGI_10014639;
	scaffold43964	TRF	Tandem_Repeat	84196	84227	55	+	.	.
scaffold43964	subtractBed	intrn	130672	130673	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130672	130923	115	+	.	.
scaffold43964	subtractBed	intrn	129460	129478	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	128276	129478	537	+	.	.
scaffold43964	subtractBed	intrn	130672	130673	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130672	130881	143	+	.	.
scaffold43964	subtractBed	intrn	130880	130923	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130672	130923	115	+	.	.
scaffold43964	subtractBed	intrn	130880	130881	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130672	130881	143	+	.	.
scaffold43964	subtractBed	intrn	130986	130986	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130986	131165	90	+	.	.
scaffold43964	subtractBed	intrn	130950	130986	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130950	131165	89	+	.	.
scaffold43964	subtractBed	intrn	131300	131300	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	131300	131416	62	+	.	.
scaffold43964	subtractBed	intrn	131164	131165	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130986	131165	90	+	.	.
scaffold43964	subtractBed	intrn	131164	131165	.	+	.	Parent=CGI_10014642;
	scaffold43964	WUBlastX	DNA_hAT	130950	131165	89	+	.	.
scaffold43964	subtractBed	intrn	137051	137290	.	-	.	Parent=CGI_10014643;
	scaffold43964	TRF	Tandem_Repeat	137051	137290	107	+	.	.
scaffold43964	subtractBed	intrn	137094	137459	.	-	.	Parent=CGI_10014643;
	scaffold43964	TRF	Tandem_Repeat	137094	137459	474	+	.	.
scaffold43964	subtractBed	intrn	134806	135075	.	-	.	Parent=CGI_10014643;
	scaffold43964	WUBlastX	LINE_RTE-X	134806	135075	37	-	.	.
scaffold43964	subtractBed	intrn	134734	134958	.	-	.	Parent=CGI_10014643;
	scaffold43964	WUBlastX	LINE_RTE-X	134734	134958	63	-	.	.
scaffold43964	subtractBed	intrn	134806	134952	.	-	.	Parent=CGI_10014643;
	scaffold43964	WUBlastX	LINE_RTE-X	134806	134952	74	-	.	.
scaffold43964	subtractBed	intrn	142436	142466	.	-	.	Parent=CGI_10014643;
	scaffold43964	TRF	Tandem_Repeat	142436	142466	62	+	.	.
scaffold43964	subtractBed	intrn	157636	157711	.	-	.	Parent=CGI_10014644;
	scaffold43964	TRF	Tandem_Repeat	157636	157716	153	+	.	.
scaffold43964	subtractBed	intrn	169949	169983	.	-	.	Parent=CGI_10014644;
	scaffold43964	TRF	Tandem_Repeat	169949	169983	70	+	.	.
scaffold43964	subtractBed	intrn	188872	188923	.	+	.	Parent=CGI_10014645;
	scaffold43964	TRF	Tandem_Repeat	188872	188923	104	+	.	.
scaffold43964	subtractBed	intrn	198954	199008	.	-	.	Parent=CGI_10014647;
	scaffold43964	TRF	Tandem_Repeat	198954	199008	110	+	.	.
scaffold43964	subtractBed	intrn	208377	208427	.	+	.	Parent=CGI_10014648;
	scaffold43964	TRF	Tandem_Repeat	208377	208427	84	+	.	.
scaffold43964	subtractBed	intrn	208438	209224	.	+	.	Parent=CGI_10014648;
	scaffold43964	TRF	Tandem_Repeat	208438	209224	1082	+	.	.
scaffold43964	subtractBed	intrn	229521	229621	.	+	.	Parent=CGI_10014650;
	scaffold43964	TRF	Tandem_Repeat	229521	229621	168	+	.	.
scaffold43964	subtractBed	intrn	255559	255727	.	+	.	Parent=CGI_10014652;
	scaffold43964	TRF	Tandem_Repeat	255559	255727	191	+	.	.
scaffold43964	subtractBed	intrn	279777	280271	.	+	.	Parent=CGI_10014654;
	scaffold43964	TRF	Tandem_Repeat	279777	280271	812	+	.	.
scaffold43964	subtractBed	intrn	280441	280776	.	+	.	Parent=CGI_10014654;
	scaffold43964	TRF	Tandem_Repeat	280441	280776	609	+	.	.
scaffold43964	subtractBed	intrn	282947	283701	.	+	.	Parent=CGI_10014654;
	scaffold43964	TRF	Tandem_Repeat	282947	283701	932	+	.	.
scaffold43964	subtractBed	intrn	292228	292494	.	-	.	Parent=CGI_10014655;
	scaffold43964	WUBlastX	LINE_L2	292228	292494	85	+	.	.
scaffold43964	subtractBed	intrn	292484	292924	.	-	.	Parent=CGI_10014655;
	scaffold43964	WUBlastX	LINE_L2	292484	292924	120	+	.	.
scaffold43964	subtractBed	intrn	316720	316748	.	-	.	Parent=CGI_10014656;
	scaffold43964	TRF	Tandem_Repeat	316720	316748	58	+	.	.
scaffold43964	subtractBed	intrn	329168	329503	.	+	.	Parent=CGI_10014658;
	scaffold43964	WUBlastX	LINE_Penelope	329168	329503	71	+	.	.
scaffold43964	subtractBed	intrn	329422	330063	.	+	.	Parent=CGI_10014658;
	scaffold43964	WUBlastX	LINE_Penelope	329422	330063	162	+	.	.
scaffold43964	subtractBed	intrn	339249	339584	.	+	.	Parent=CGI_10014661;
	scaffold43964	WUBlastX	LINE_Penelope	339249	339584	75	+	.	.
scaffold43964	subtractBed	intrn	339503	340153	.	+	.	Parent=CGI_10014661;
	scaffold43964	WUBlastX	LINE_Penelope	339503	340153	209	+	.	.
scaffold43964	subtractBed	intrn	362285	362312	.	-	.	Parent=CGI_10014662;
	scaffold43964	TRF	Tandem_Repeat	362285	362312	56	+	.	.
scaffold43964	subtractBed	intrn	391271	391312	.	-	.	Parent=CGI_10014664;
	scaffold43964	TRF	Tandem_Repeat	391271	391312	54	+	.	.
scaffold43964	subtractBed	intrn	394298	394347	.	-	.	Parent=CGI_10014664;
	scaffold43964	TRF	Tandem_Repeat	394298	394347	100	+	.	.
scaffold43964	subtractBed	intrn	399445	399514	.	-	.	Parent=CGI_10014664;
	scaffold43964	TRF	Tandem_Repeat	399445	399514	112	+	.	.
scaffold43986	subtractBed	intrn	1726	1771	.	+	.	Parent=CGI_10015011;
	scaffold43986	TRF	Tandem_Repeat	1726	1771	83	+	.	.
scaffold43986	subtractBed	intrn	6936	6977	.	-	.	Parent=CGI_10015012;
	scaffold43986	TRF	Tandem_Repeat	6936	6977	84	+	.	.
scaffold43986	subtractBed	intrn	19110	19168	.	-	.	Parent=CGI_10015012;
	scaffold43986	TRF	Tandem_Repeat	19110	19168	118	+	.	.
scaffold43986	subtractBed	intrn	89863	89896	.	-	.	Parent=CGI_10015020;
	scaffold43986	TRF	Tandem_Repeat	89863	89896	68	+	.	.
scaffold43986	subtractBed	intrn	91903	92027	.	-	.	Parent=CGI_10015020;
	scaffold43986	TRF	Tandem_Repeat	91903	92027	225	+	.	.
scaffold43986	subtractBed	intrn	104907	104957	.	-	.	Parent=CGI_10015022;
	scaffold43986	TRF	Tandem_Repeat	104907	104957	102	+	.	.
scaffold43986	subtractBed	intrn	163213	163270	.	+	.	Parent=CGI_10015026;
	scaffold43986	TRF	Tandem_Repeat	163213	163270	73	+	.	.
scaffold43986	subtractBed	intrn	163214	163267	.	+	.	Parent=CGI_10015026;
	scaffold43986	TRF	Tandem_Repeat	163214	163267	56	+	.	.
scaffold43986	subtractBed	intrn	164789	164826	.	+	.	Parent=CGI_10015026;
	scaffold43986	TRF	Tandem_Repeat	164789	164826	76	+	.	.
scaffold43986	subtractBed	intrn	165528	165562	.	+	.	Parent=CGI_10015026;
	scaffold43986	TRF	Tandem_Repeat	165528	165562	70	+	.	.
scaffold43986	subtractBed	intrn	166415	166439	.	+	.	Parent=CGI_10015026;
	scaffold43986	TRF	Tandem_Repeat	166415	166439	50	+	.	.
scaffold43986	subtractBed	intrn	243671	244584	.	+	.	Parent=CGI_10015030;
	scaffold43986	TRF	Tandem_Repeat	243671	244584	989	+	.	.
scaffold43986	subtractBed	intrn	253990	254150	.	+	.	Parent=CGI_10015031;
	scaffold43986	TRF	Tandem_Repeat	253990	254150	277	+	.	.
scaffold43986	subtractBed	intrn	283629	283659	.	-	.	Parent=CGI_10015032;
	scaffold43986	TRF	Tandem_Repeat	283629	283659	62	+	.	.
scaffold43986	subtractBed	intrn	287882	287923	.	-	.	Parent=CGI_10015032;
	scaffold43986	TRF	Tandem_Repeat	287882	287923	66	+	.	.
scaffold43986	subtractBed	intrn	290280	290310	.	-	.	Parent=CGI_10015032;
	scaffold43986	TRF	Tandem_Repeat	290280	290310	53	+	.	.
scaffold43986	subtractBed	intrn	327149	327193	.	+	.	Parent=CGI_10015033;
	scaffold43986	TRF	Tandem_Repeat	327149	327193	90	+	.	.
scaffold43986	subtractBed	intrn	329643	329688	.	+	.	Parent=CGI_10015033;
	scaffold43986	TRF	Tandem_Repeat	329643	329688	92	+	.	.
scaffold43986	subtractBed	intrn	334372	334528	.	+	.	Parent=CGI_10015033;
	scaffold43986	TRF	Tandem_Repeat	334372	334528	194	+	.	.
scaffold43986	subtractBed	intrn	387189	389708	.	-	.	Parent=CGI_10015036;
	scaffold43986	WUBlastX	LTR_Pao	387189	389708	1753	-	.	.
scaffold43986	subtractBed	intrn	389716	391899	.	-	.	Parent=CGI_10015036;
	scaffold43986	WUBlastX	LTR_Pao	389716	391899	1449	-	.	.
scaffold43986	subtractBed	intrn	391892	392536	.	-	.	Parent=CGI_10015036;
	scaffold43986	WUBlastX	LTR_Pao	391892	392536	388	-	.	.
scaffold43986	subtractBed	intrn	391883	392725	.	-	.	Parent=CGI_10015036;
	scaffold43986	WUBlastX	LTR_Pao	391883	392725	61	-	.	.
scaffold43988	subtractBed	intrn	60852	61379	.	-	.	Parent=CGI_10014965;
	scaffold43988	WUBlastX	LINE_RTE-X	60852	61379	142	-	.	.
scaffold43988	subtractBed	intrn	60987	61370	.	-	.	Parent=CGI_10014965;
	scaffold43988	WUBlastX	LINE_RTE-X	60987	61370	167	-	.	.
scaffold43988	subtractBed	intrn	74232	74268	.	-	.	Parent=CGI_10014967;
	scaffold43988	TRF	Tandem_Repeat	74232	74268	74	+	.	.
scaffold43988	subtractBed	intrn	81146	81196	.	+	.	Parent=CGI_10014968;
	scaffold43988	TRF	Tandem_Repeat	81146	81196	102	+	.	.
scaffold43988	subtractBed	intrn	328995	330514	.	-	.	Parent=CGI_10014976;
	scaffold43988	TRF	Tandem_Repeat	328995	330514	1924	+	.	.
scaffold43988	subtractBed	intrn	349213	349483	.	-	.	Parent=CGI_10014977;
	scaffold43988	TRF	Tandem_Repeat	349213	349483	398	+	.	.
scaffold43988	subtractBed	intrn	357697	357761	.	-	.	Parent=CGI_10014979;
	scaffold43988	TRF	Tandem_Repeat	357697	357761	130	+	.	.
scaffold43988	subtractBed	intrn	359179	359218	.	-	.	Parent=CGI_10014979;
	scaffold43988	TRF	Tandem_Repeat	359179	359218	62	+	.	.
scaffold43988	subtractBed	intrn	411060	411123	.	+	.	Parent=CGI_10014984;
	scaffold43988	TRF	Tandem_Repeat	411060	411123	128	+	.	.
scaffold44	subtractBed	intrn	25462	25513	.	+	.	Parent=CGI_10016815;
	scaffold44	TRF	Tandem_Repeat	25462	25513	104	+	.	.
scaffold44	subtractBed	intrn	31512	31569	.	+	.	Parent=CGI_10016815;
	scaffold44	TRF	Tandem_Repeat	31512	31569	82	+	.	.
scaffold44	subtractBed	intrn	90192	90296	.	+	.	Parent=CGI_10016819;
	scaffold44	WUBlastX	DNA_Zator	90192	90296	24	+	.	.
scaffold44	subtractBed	intrn	102537	102703	.	-	.	Parent=CGI_10016820;
	scaffold44	TRF	Tandem_Repeat	102537	102703	244	+	.	.
scaffold44	subtractBed	intrn	107638	107676	.	-	.	Parent=CGI_10016820;
	scaffold44	TRF	Tandem_Repeat	107638	107676	78	+	.	.
scaffold44	subtractBed	intrn	240715	240785	.	-	.	Parent=CGI_10016826;
	scaffold44	TRF	Tandem_Repeat	240715	240785	126	+	.	.
scaffold44	subtractBed	intrn	240839	240894	.	-	.	Parent=CGI_10016826;
	scaffold44	TRF	Tandem_Repeat	240839	240894	112	+	.	.
scaffold44	subtractBed	intrn	244667	244684	.	+	.	Parent=CGI_10016827;
	scaffold44	WUBlastX	DNA_Kolobok-IS4	244181	244684	86	+	.	.
scaffold44	subtractBed	intrn	263382	264515	.	-	.	Parent=CGI_10016829;
	scaffold44	TRF	Tandem_Repeat	263382	264515	1621	+	.	.
scaffold44	subtractBed	intrn	275679	275737	.	-	.	Parent=CGI_10016830;
	scaffold44	TRF	Tandem_Repeat	275679	275737	118	+	.	.
scaffold44	subtractBed	intrn	312619	312670	.	-	.	Parent=CGI_10016834;
	scaffold44	TRF	Tandem_Repeat	312619	312670	104	+	.	.
scaffold44	subtractBed	intrn	313201	313250	.	-	.	Parent=CGI_10016834;
	scaffold44	TRF	Tandem_Repeat	313201	313250	100	+	.	.
scaffold44	subtractBed	intrn	313623	313670	.	-	.	Parent=CGI_10016834;
	scaffold44	TRF	Tandem_Repeat	313623	313670	69	+	.	.
scaffold44	subtractBed	intrn	313622	313676	.	-	.	Parent=CGI_10016834;
	scaffold44	TRF	Tandem_Repeat	313622	313676	65	+	.	.
scaffold44	subtractBed	intrn	349982	350734	.	-	.	Parent=CGI_10016836;
	scaffold44	WUBlastX	DNA_IS4EU	349982	350734	85	-	.	.
scaffold44	subtractBed	intrn	349361	350560	.	-	.	Parent=CGI_10016836;
	scaffold44	WUBlastX	DNA_IS4EU	349361	350560	109	-	.	.
scaffold44	subtractBed	intrn	349346	350083	.	-	.	Parent=CGI_10016836;
	scaffold44	WUBlastX	DNA_IS4EU	349346	350083	139	-	.	.
scaffold44	subtractBed	intrn	349361	349987	.	-	.	Parent=CGI_10016836;
	scaffold44	WUBlastX	DNA_IS4EU	349361	349987	226	-	.	.
scaffold44	subtractBed	intrn	370688	370700	.	-	.	Parent=CGI_10016838;
	scaffold44	WUBlastX	LINE_CR1	369918	370700	26	-	.	.
scaffold44	subtractBed	intrn	372515	374381	.	-	.	Parent=CGI_10016838;
	scaffold44	TRF	Tandem_Repeat	372515	374381	2408	+	.	.
scaffold44	subtractBed	intrn	391691	391729	.	-	.	Parent=CGI_10016839;
	scaffold44	TRF	Tandem_Repeat	391691	391729	60	+	.	.
scaffold44	subtractBed	intrn	389221	389349	.	-	.	Parent=CGI_10016839;
	scaffold44	WUBlastX	LINE_RTE-X	389221	389349	31	+	.	.
scaffold44	subtractBed	intrn	388386	388610	.	-	.	Parent=CGI_10016839;
	scaffold44	WUBlastX	LINE_RTE-X	388386	388610	52	+	.	.
scaffold44	subtractBed	intrn	388386	388574	.	-	.	Parent=CGI_10016839;
	scaffold44	WUBlastX	LINE_RTE-X	388386	388574	68	+	.	.
scaffold44	subtractBed	intrn	393174	393209	.	-	.	Parent=CGI_10016839;
	scaffold44	TRF	Tandem_Repeat	393174	393209	72	+	.	.
scaffold44	subtractBed	intrn	430245	430438	.	+	.	Parent=CGI_10016840;
	scaffold44	TRF	Tandem_Repeat	430245	430438	230	+	.	.
scaffold44	subtractBed	intrn	431870	432057	.	+	.	Parent=CGI_10016840;
	scaffold44	TRF	Tandem_Repeat	431870	432057	153	+	.	.
scaffold44	subtractBed	intrn	454269	454522	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	454269	454522	481	+	.	.
scaffold44	subtractBed	intrn	459615	459680	.	+	.	Parent=CGI_10016842;
	scaffold44	WUBlastX	DNA_Maverick	459615	459920	67	-	.	.
scaffold44	subtractBed	intrn	464010	464069	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	464010	464069	52	+	.	.
scaffold44	subtractBed	intrn	464010	464069	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	464010	464069	65	+	.	.
scaffold44	subtractBed	intrn	465388	465564	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	465388	465564	282	+	.	.
scaffold44	subtractBed	intrn	465388	465564	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	465388	465564	282	+	.	.
scaffold44	subtractBed	intrn	459721	459920	.	+	.	Parent=CGI_10016842;
	scaffold44	WUBlastX	DNA_Maverick	459615	459920	67	-	.	.
scaffold44	subtractBed	intrn	470811	470873	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	470811	470873	126	+	.	.
scaffold44	subtractBed	intrn	477458	477501	.	+	.	Parent=CGI_10016842;
	scaffold44	TRF	Tandem_Repeat	477458	477501	88	+	.	.
scaffold440	subtractBed	intrn	167105	167159	.	+	.	Parent=CGI_10014136;
	scaffold440	TRF	Tandem_Repeat	167105	167159	103	+	.	.
scaffold440	subtractBed	intrn	170025	170431	.	+	.	Parent=CGI_10014136;
	scaffold440	TRF	Tandem_Repeat	170025	170431	391	+	.	.
scaffold440	subtractBed	intrn	170043	170423	.	+	.	Parent=CGI_10014136;
	scaffold440	TRF	Tandem_Repeat	170043	170423	501	+	.	.
scaffold440	subtractBed	intrn	286174	286659	.	+	.	Parent=CGI_10014144;
	scaffold440	WUBlastX	LTR_Gypsy	286174	286659	76	+	.	.
scaffold440	subtractBed	intrn	285956	286162	.	+	.	Parent=CGI_10014144;
	scaffold440	WUBlastX	LTR_Gypsy	285956	286162	145	+	.	.
scaffold440	subtractBed	intrn	286171	286473	.	+	.	Parent=CGI_10014144;
	scaffold440	WUBlastX	LTR_Gypsy	286171	286473	114	+	.	.
scaffold440	subtractBed	intrn	290443	290479	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	290443	290479	74	+	.	.
scaffold440	subtractBed	intrn	296948	296999	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	296948	296999	86	+	.	.
scaffold440	subtractBed	intrn	301671	302423	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	301671	302423	1051	+	.	.
scaffold440	subtractBed	intrn	301671	302420	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	301671	302420	1028	+	.	.
scaffold440	subtractBed	intrn	304988	305013	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	304988	305013	52	+	.	.
scaffold440	subtractBed	intrn	305151	305893	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	305151	305893	849	+	.	.
scaffold440	subtractBed	intrn	305059	305868	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	305059	305868	836	+	.	.
scaffold440	subtractBed	intrn	306985	307060	.	+	.	Parent=CGI_10014144;
	scaffold440	TRF	Tandem_Repeat	306985	307060	52	+	.	.
scaffold44006	subtractBed	intrn	15783	16080	.	-	.	Parent=CGI_10015569;
	scaffold44006	TRF	Tandem_Repeat	15783	16080	497	+	.	.
scaffold44006	subtractBed	intrn	17209	17301	.	-	.	Parent=CGI_10015569;
	scaffold44006	WUBlastX	LINE_CR1	17209	17301	80	+	.	.
scaffold44006	subtractBed	intrn	19879	19920	.	-	.	Parent=CGI_10015569;
	scaffold44006	TRF	Tandem_Repeat	19879	19920	84	+	.	.
scaffold44006	subtractBed	intrn	52767	52806	.	+	.	Parent=CGI_10015571;
	scaffold44006	TRF	Tandem_Repeat	52767	52806	80	+	.	.
scaffold44006	subtractBed	intrn	59738	59787	.	+	.	Parent=CGI_10015571;
	scaffold44006	TRF	Tandem_Repeat	59738	59787	100	+	.	.
scaffold44006	subtractBed	intrn	89267	89324	.	-	.	Parent=CGI_10015573;
	scaffold44006	TRF	Tandem_Repeat	89267	89324	107	+	.	.
scaffold44006	subtractBed	intrn	106225	106276	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	106225	106276	50	+	.	.
scaffold44006	subtractBed	intrn	106284	107080	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	106284	107080	1106	+	.	.
scaffold44006	subtractBed	intrn	108680	110763	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	108680	110763	1670	+	.	.
scaffold44006	subtractBed	intrn	108680	110763	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	108680	110763	2183	+	.	.
scaffold44006	subtractBed	intrn	108680	110763	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	108680	110763	2183	+	.	.
scaffold44006	subtractBed	intrn	117539	117586	.	+	.	Parent=CGI_10015574;
	scaffold44006	WUBlastX	DNA_En-Spm	117539	117586	20	+	.	.
scaffold44006	subtractBed	intrn	118684	118875	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	118684	118875	368	+	.	.
scaffold44006	subtractBed	intrn	118681	119174	.	+	.	Parent=CGI_10015574;
	scaffold44006	TRF	Tandem_Repeat	118681	119174	158	+	.	.
scaffold44006	subtractBed	intrn	166070	166116	.	-	.	Parent=CGI_10015578;
	scaffold44006	TRF	Tandem_Repeat	166070	166116	94	+	.	.
scaffold44006	subtractBed	intrn	169839	169903	.	-	.	Parent=CGI_10015578;
	scaffold44006	TRF	Tandem_Repeat	169839	169903	94	+	.	.
scaffold44006	subtractBed	intrn	221195	221287	.	-	.	Parent=CGI_10015579;
	scaffold44006	TRF	Tandem_Repeat	221195	221287	105	+	.	.
scaffold44006	subtractBed	intrn	255561	255959	.	-	.	Parent=CGI_10015581;
	scaffold44006	WUBlastX	DNA_TcMar-Tc1	255561	255959	68	+	.	.
scaffold44006	subtractBed	intrn	255639	255953	.	-	.	Parent=CGI_10015581;
	scaffold44006	WUBlastX	DNA_TcMar-Tc1	255639	255953	70	+	.	.
scaffold44006	subtractBed	intrn	311591	311917	.	+	.	Parent=CGI_10015583;
	scaffold44006	TRF	Tandem_Repeat	311591	311917	385	+	.	.
scaffold44006	subtractBed	intrn	311591	311917	.	+	.	Parent=CGI_10015583;
	scaffold44006	TRF	Tandem_Repeat	311591	311917	424	+	.	.
scaffold44006	subtractBed	intrn	311260	311594	.	+	.	Parent=CGI_10015583;
	scaffold44006	TRF	Tandem_Repeat	311260	311594	313	+	.	.
scaffold44006	subtractBed	intrn	311260	311594	.	+	.	Parent=CGI_10015583;
	scaffold44006	TRF	Tandem_Repeat	311260	311594	318	+	.	.
scaffold44006	subtractBed	intrn	374188	374240	.	-	.	Parent=CGI_10015586;
	scaffold44006	TRF	Tandem_Repeat	374188	374240	106	+	.	.
scaffold44006	subtractBed	intrn	374734	374789	.	-	.	Parent=CGI_10015586;
	scaffold44006	TRF	Tandem_Repeat	374734	374789	85	+	.	.
scaffold44006	subtractBed	intrn	374823	375614	.	-	.	Parent=CGI_10015586;
	scaffold44006	TRF	Tandem_Repeat	374823	375614	1196	+	.	.
scaffold44006	subtractBed	intrn	417471	417727	.	+	.	Parent=CGI_10015592;
	scaffold44006	TRF	Tandem_Repeat	417471	417727	317	+	.	.
scaffold44006	subtractBed	intrn	430338	430568	.	-	.	Parent=CGI_10015593;
	scaffold44006	WUBlastX	LINE_CR1-L2	430338	430568	96	+	.	.
scaffold44006	subtractBed	intrn	430338	430745	.	-	.	Parent=CGI_10015593;
	scaffold44006	WUBlastX	LINE_CR1-L2	430338	430745	42	+	.	.
scaffold44008	subtractBed	intrn	39485	40281	.	-	.	Parent=CGI_10015282;
	scaffold44008	TRF	Tandem_Repeat	39485	40281	1425	+	.	.
scaffold44008	subtractBed	intrn	43220	43273	.	-	.	Parent=CGI_10015282;
	scaffold44008	TRF	Tandem_Repeat	43220	43273	54	+	.	.
scaffold44008	subtractBed	intrn	44692	44765	.	-	.	Parent=CGI_10015282;
	scaffold44008	TRF	Tandem_Repeat	44692	44765	53	+	.	.
scaffold44008	subtractBed	intrn	37444	38204	.	-	.	Parent=CGI_10015282;
	scaffold44008	WUBlastX	DNA_Harbinger	37443	38204	528	-	.	.
scaffold44008	subtractBed	intrn	121801	121853	.	-	.	Parent=CGI_10015285;
	scaffold44008	TRF	Tandem_Repeat	121801	121853	106	+	.	.
scaffold44008	subtractBed	intrn	136843	136896	.	-	.	Parent=CGI_10015287;
	scaffold44008	TRF	Tandem_Repeat	136843	136896	101	+	.	.
scaffold44008	subtractBed	intrn	177280	177398	.	-	.	Parent=CGI_10015290;
	scaffold44008	TRF	Tandem_Repeat	177280	177398	141	+	.	.
scaffold44008	subtractBed	intrn	179642	179911	.	-	.	Parent=CGI_10015290;
	scaffold44008	WUBlastX	LINE_CR1-L2	179642	179911	100	-	.	.
scaffold44008	subtractBed	intrn	179007	179570	.	-	.	Parent=CGI_10015290;
	scaffold44008	WUBlastX	LINE_L2	179007	179570	68	-	.	.
scaffold44008	subtractBed	intrn	179597	179869	.	-	.	Parent=CGI_10015290;
	scaffold44008	WUBlastX	LINE_L2	179597	179869	112	-	.	.
scaffold44008	subtractBed	intrn	180765	180956	.	-	.	Parent=CGI_10015290;
	scaffold44008	WUBlastX	LINE_L2	180765	180956	27	-	.	.
scaffold44008	subtractBed	intrn	183429	183502	.	+	.	Parent=CGI_10015291;
	scaffold44008	TRF	Tandem_Repeat	183429	183502	148	+	.	.
scaffold44008	subtractBed	intrn	221902	221977	.	-	.	Parent=CGI_10015294;
	scaffold44008	TRF	Tandem_Repeat	221902	221977	143	+	.	.
scaffold44008	subtractBed	intrn	221902	221977	.	+	.	Parent=CGI_10015295;
	scaffold44008	TRF	Tandem_Repeat	221902	221977	143	+	.	.
scaffold44008	subtractBed	intrn	225424	225461	.	+	.	Parent=CGI_10015295;
	scaffold44008	TRF	Tandem_Repeat	225424	225461	76	+	.	.
scaffold44008	subtractBed	intrn	225424	225461	.	-	.	Parent=CGI_10015296;
	scaffold44008	TRF	Tandem_Repeat	225424	225461	76	+	.	.
scaffold44008	subtractBed	intrn	347685	347721	.	-	.	Parent=CGI_10015299;
	scaffold44008	TRF	Tandem_Repeat	347685	347721	74	+	.	.
scaffold44008	subtractBed	intrn	353896	354204	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT-Tip100	353896	354204	47	+	.	.
scaffold44008	subtractBed	intrn	353896	354108	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT-Tip100	353896	354108	97	+	.	.
scaffold44008	subtractBed	intrn	354618	354848	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT-Tip100	354618	354848	59	+	.	.
scaffold44008	subtractBed	intrn	353929	354411	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT	353929	354411	41	+	.	.
scaffold44008	subtractBed	intrn	354420	354809	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT-Tip100	354420	354809	128	+	.	.
scaffold44008	subtractBed	intrn	353896	354282	.	+	.	Parent=CGI_10015300;
	scaffold44008	WUBlastX	DNA_hAT-Tip100	353896	354282	46	+	.	.
scaffold44008	subtractBed	intrn	399193	399218	.	+	.	Parent=CGI_10015301;
	scaffold44008	TRF	Tandem_Repeat	399193	399218	52	+	.	.
scaffold44054	subtractBed	intrn	37483	37830	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	37483	37830	662	+	.	.
scaffold44054	subtractBed	intrn	41746	42294	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	41746	42294	782	+	.	.
scaffold44054	subtractBed	intrn	42411	42607	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	42411	42607	187	+	.	.
scaffold44054	subtractBed	intrn	43017	43162	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	43017	43162	150	+	.	.
scaffold44054	subtractBed	intrn	43472	43881	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	43472	43881	703	+	.	.
scaffold44054	subtractBed	intrn	43386	43881	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	43386	43881	796	+	.	.
scaffold44054	subtractBed	intrn	45237	45292	.	-	.	Parent=CGI_10016153;
	scaffold44054	TRF	Tandem_Repeat	45237	45292	58	+	.	.
scaffold44054	subtractBed	intrn	75428	75456	.	-	.	Parent=CGI_10016157;
	scaffold44054	TRF	Tandem_Repeat	75428	75456	58	+	.	.
scaffold44054	subtractBed	intrn	73564	73603	.	-	.	Parent=CGI_10016157;
	scaffold44054	WUBlastX	DNA_Kolobok-Hyd	73388	73603	31	-	.	.
scaffold44054	subtractBed	intrn	123713	123928	.	-	.	Parent=CGI_10016158;
	scaffold44054	TRF	Tandem_Repeat	123713	123928	163	+	.	.
scaffold44054	subtractBed	intrn	163955	165339	.	+	.	Parent=CGI_10016160;
	scaffold44054	TRF	Tandem_Repeat	163955	165339	1367	+	.	.
scaffold44054	subtractBed	intrn	166354	166579	.	+	.	Parent=CGI_10016160;
	scaffold44054	TRF	Tandem_Repeat	166354	166579	344	+	.	.
scaffold44054	subtractBed	intrn	189302	189844	.	+	.	Parent=CGI_10016161;
	scaffold44054	TRF	Tandem_Repeat	189302	189844	872	+	.	.
scaffold44054	subtractBed	intrn	192735	192764	.	+	.	Parent=CGI_10016162;
	scaffold44054	TRF	Tandem_Repeat	192735	192764	51	+	.	.
scaffold44054	subtractBed	intrn	193653	195581	.	+	.	Parent=CGI_10016162;
	scaffold44054	TRF	Tandem_Repeat	193653	195581	2498	+	.	.
scaffold44054	subtractBed	intrn	203805	204301	.	+	.	Parent=CGI_10016162;
	scaffold44054	TRF	Tandem_Repeat	203805	204301	868	+	.	.
scaffold44054	subtractBed	intrn	220321	220396	.	-	.	Parent=CGI_10016164;
	scaffold44054	WUBlastX	DNA_hAT	220321	220566	63	-	.	.
scaffold44054	subtractBed	intrn	260376	260451	.	+	.	Parent=CGI_10016168;
	scaffold44054	TRF	Tandem_Repeat	260376	260451	57	+	.	.
scaffold44054	subtractBed	intrn	295328	295463	.	-	.	Parent=CGI_10016170;
	scaffold44054	TRF	Tandem_Repeat	295328	295486	184	+	.	.
scaffold44054	subtractBed	intrn	300510	300557	.	-	.	Parent=CGI_10016170;
	scaffold44054	TRF	Tandem_Repeat	300510	300557	51	+	.	.
scaffold44054	subtractBed	intrn	300513	300557	.	-	.	Parent=CGI_10016170;
	scaffold44054	TRF	Tandem_Repeat	300513	300557	72	+	.	.
scaffold44054	subtractBed	intrn	303083	303138	.	-	.	Parent=CGI_10016170;
	scaffold44054	TRF	Tandem_Repeat	303083	303138	105	+	.	.
scaffold44054	subtractBed	intrn	307502	307654	.	+	.	Parent=CGI_10016171;
	scaffold44054	WUBlastX	LINE_RTE-X	307502	307654	75	-	.	.
scaffold44054	subtractBed	intrn	307454	307654	.	+	.	Parent=CGI_10016171;
	scaffold44054	WUBlastX	LINE_RTE-X	307454	307654	67	-	.	.
scaffold44054	subtractBed	intrn	307400	307654	.	+	.	Parent=CGI_10016171;
	scaffold44054	WUBlastX	LINE_RTE-X	307400	307654	49	-	.	.
scaffold44054	subtractBed	intrn	307502	307684	.	+	.	Parent=CGI_10016171;
	scaffold44054	WUBlastX	LINE_RTE-X	307502	307684	56	-	.	.
scaffold44054	subtractBed	intrn	309507	310780	.	+	.	Parent=CGI_10016171;
	scaffold44054	TRF	Tandem_Repeat	309507	310780	1517	+	.	.
scaffold44054	subtractBed	intrn	312158	312794	.	+	.	Parent=CGI_10016171;
	scaffold44054	TRF	Tandem_Repeat	312158	312794	585	+	.	.
scaffold44054	subtractBed	intrn	324864	324973	.	-	.	Parent=CGI_10016172;
	scaffold44054	TRF	Tandem_Repeat	324864	324973	211	+	.	.
scaffold44054	subtractBed	intrn	328288	328487	.	-	.	Parent=CGI_10016172;
	scaffold44054	TRF	Tandem_Repeat	328288	328523	346	+	.	.
scaffold44054	subtractBed	intrn	328904	329081	.	-	.	Parent=CGI_10016172;
	scaffold44054	TRF	Tandem_Repeat	328904	329081	133	+	.	.
scaffold44054	subtractBed	intrn	331598	332729	.	-	.	Parent=CGI_10016172;
	scaffold44054	TRF	Tandem_Repeat	331598	332729	1012	+	.	.
scaffold44054	subtractBed	intrn	338348	338578	.	+	.	Parent=CGI_10016173;
	scaffold44054	TRF	Tandem_Repeat	338348	338578	304	+	.	.
scaffold44054	subtractBed	intrn	372137	372181	.	-	.	Parent=CGI_10016175;
	scaffold44054	TRF	Tandem_Repeat	372137	372181	90	+	.	.
scaffold44054	subtractBed	intrn	400810	400887	.	+	.	Parent=CGI_10016178;
	scaffold44054	TRF	Tandem_Repeat	400810	400887	156	+	.	.
scaffold44054	subtractBed	intrn	401092	401487	.	+	.	Parent=CGI_10016178;
	scaffold44054	TRF	Tandem_Repeat	401092	401487	594	+	.	.
scaffold44054	subtractBed	intrn	436541	436584	.	-	.	Parent=CGI_10016180;
	scaffold44054	TRF	Tandem_Repeat	436541	436584	88	+	.	.
scaffold44054	subtractBed	intrn	440828	440884	.	-	.	Parent=CGI_10016180;
	scaffold44054	TRF	Tandem_Repeat	440828	440884	114	+	.	.
scaffold44064	subtractBed	intrn	19821	19848	.	-	.	Parent=CGI_10016747;
	scaffold44064	TRF	Tandem_Repeat	19821	19848	56	+	.	.
scaffold44064	subtractBed	intrn	44235	44268	.	-	.	Parent=CGI_10016748;
	scaffold44064	TRF	Tandem_Repeat	44235	44268	68	+	.	.
scaffold44064	subtractBed	intrn	59379	59435	.	+	.	Parent=CGI_10016750;
	scaffold44064	TRF	Tandem_Repeat	59379	59435	71	+	.	.
scaffold44064	subtractBed	intrn	59379	59435	.	+	.	Parent=CGI_10016750;
	scaffold44064	TRF	Tandem_Repeat	59379	59435	89	+	.	.
scaffold44064	subtractBed	intrn	82248	82911	.	-	.	Parent=CGI_10016753;
	scaffold44064	TRF	Tandem_Repeat	82248	82911	1019	+	.	.
scaffold44064	subtractBed	intrn	146815	146871	.	-	.	Parent=CGI_10016758;
	scaffold44064	TRF	Tandem_Repeat	146815	146871	114	+	.	.
scaffold44064	subtractBed	intrn	150909	150943	.	-	.	Parent=CGI_10016758;
	scaffold44064	TRF	Tandem_Repeat	150909	150943	70	+	.	.
scaffold44064	subtractBed	intrn	183333	183383	.	+	.	Parent=CGI_10016760;
	scaffold44064	TRF	Tandem_Repeat	183333	183383	93	+	.	.
scaffold44064	subtractBed	intrn	214863	215270	.	-	.	Parent=CGI_10016763;
	scaffold44064	WUBlastX	LINE_CR1	214863	215270	73	+	.	.
scaffold44064	subtractBed	intrn	215306	215721	.	-	.	Parent=CGI_10016763;
	scaffold44064	WUBlastX	LINE_CR1	215306	215734	47	+	.	.
scaffold44064	subtractBed	intrn	215321	215455	.	-	.	Parent=CGI_10016763;
	scaffold44064	WUBlastX	LINE_CR1	215321	215455	51	+	.	.
scaffold44064	subtractBed	intrn	214815	215351	.	-	.	Parent=CGI_10016763;
	scaffold44064	WUBlastX	LINE_CR1	214815	215351	21	+	.	.
scaffold44064	subtractBed	intrn	217494	217591	.	+	.	Parent=CGI_10016764;
	scaffold44064	TRF	Tandem_Repeat	217494	217591	72	+	.	.
scaffold44064	subtractBed	intrn	242809	242842	.	-	.	Parent=CGI_10016765;
	scaffold44064	TRF	Tandem_Repeat	242809	242842	68	+	.	.
scaffold44064	subtractBed	intrn	266501	266547	.	+	.	Parent=CGI_10016766;
	scaffold44064	TRF	Tandem_Repeat	266501	266547	94	+	.	.
scaffold44064	subtractBed	intrn	270596	270705	.	+	.	Parent=CGI_10016766;
	scaffold44064	TRF	Tandem_Repeat	270596	270705	123	+	.	.
scaffold44064	subtractBed	intrn	277513	277554	.	+	.	Parent=CGI_10016767;
	scaffold44064	TRF	Tandem_Repeat	277513	277554	84	+	.	.
scaffold44064	subtractBed	intrn	279273	279471	.	+	.	Parent=CGI_10016767;
	scaffold44064	TRF	Tandem_Repeat	279273	279471	213	+	.	.
scaffold44064	subtractBed	intrn	349352	349394	.	-	.	Parent=CGI_10016775;
	scaffold44064	TRF	Tandem_Repeat	349352	349394	86	+	.	.
scaffold44064	subtractBed	intrn	349571	349620	.	-	.	Parent=CGI_10016775;
	scaffold44064	TRF	Tandem_Repeat	349571	349620	77	+	.	.
scaffold44064	subtractBed	intrn	387423	387454	.	-	.	Parent=CGI_10016776;
	scaffold44064	TRF	Tandem_Repeat	387423	387454	64	+	.	.
scaffold44064	subtractBed	intrn	388688	389955	.	-	.	Parent=CGI_10016776;
	scaffold44064	TRF	Tandem_Repeat	388688	389955	1654	+	.	.
scaffold44064	subtractBed	intrn	412034	413181	.	-	.	Parent=CGI_10016779;
	scaffold44064	TRF	Tandem_Repeat	412034	413181	1400	+	.	.
scaffold44064	subtractBed	intrn	414284	414340	.	-	.	Parent=CGI_10016779;
	scaffold44064	TRF	Tandem_Repeat	414284	414340	114	+	.	.
scaffold44064	subtractBed	intrn	429253	429446	.	-	.	Parent=CGI_10016781;
	scaffold44064	TRF	Tandem_Repeat	429253	429446	109	+	.	.
scaffold44064	subtractBed	intrn	442662	442697	.	-	.	Parent=CGI_10016783;
	scaffold44064	TRF	Tandem_Repeat	442662	442697	65	+	.	.
scaffold44064	subtractBed	intrn	455601	455636	.	-	.	Parent=CGI_10016785;
	scaffold44064	TRF	Tandem_Repeat	455601	455636	63	+	.	.
scaffold44064	subtractBed	intrn	459098	459256	.	-	.	Parent=CGI_10016785;
	scaffold44064	TRF	Tandem_Repeat	459098	459256	112	+	.	.
scaffold44064	subtractBed	intrn	459098	459256	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	459098	459256	112	+	.	.
scaffold44064	subtractBed	intrn	461217	461269	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	461217	461269	97	+	.	.
scaffold44064	subtractBed	intrn	462403	462447	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	462403	462447	83	+	.	.
scaffold44064	subtractBed	intrn	472303	472351	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	472303	472351	53	+	.	.
scaffold44064	subtractBed	intrn	472393	472525	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	472393	472525	86	+	.	.
scaffold44064	subtractBed	intrn	472471	472551	.	+	.	Parent=CGI_10016786;
	scaffold44064	TRF	Tandem_Repeat	472471	472551	63	+	.	.
scaffold44064	subtractBed	intrn	461217	461269	.	-	.	Parent=CGI_10016787;
	scaffold44064	TRF	Tandem_Repeat	461217	461269	97	+	.	.
scaffold44064	subtractBed	intrn	462403	462447	.	-	.	Parent=CGI_10016787;
	scaffold44064	TRF	Tandem_Repeat	462403	462447	83	+	.	.
scaffold44064	subtractBed	intrn	472303	472351	.	-	.	Parent=CGI_10016787;
	scaffold44064	TRF	Tandem_Repeat	472303	472351	53	+	.	.
scaffold44064	subtractBed	intrn	472393	472525	.	-	.	Parent=CGI_10016787;
	scaffold44064	TRF	Tandem_Repeat	472393	472525	86	+	.	.
scaffold44064	subtractBed	intrn	472471	472551	.	-	.	Parent=CGI_10016787;
	scaffold44064	TRF	Tandem_Repeat	472471	472551	63	+	.	.
scaffold44098	subtractBed	intrn	30171	31154	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	30171	31154	1227	+	.	.
scaffold44098	subtractBed	intrn	30908	31054	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	30908	31054	59	+	.	.
scaffold44098	subtractBed	intrn	31543	32146	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	31543	32146	806	+	.	.
scaffold44098	subtractBed	intrn	32081	32188	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	32081	32188	105	+	.	.
scaffold44098	subtractBed	intrn	33453	33638	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	33453	33638	103	+	.	.
scaffold44098	subtractBed	intrn	33461	33620	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	33461	33620	119	+	.	.
scaffold44098	subtractBed	intrn	33461	33973	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	33461	33973	187	+	.	.
scaffold44098	subtractBed	intrn	33739	33973	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	33739	33973	301	+	.	.
scaffold44098	subtractBed	intrn	37146	37202	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	37146	37202	60	+	.	.
scaffold44098	subtractBed	intrn	37173	37235	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	37173	37235	63	+	.	.
scaffold44098	subtractBed	intrn	37130	37236	.	-	.	Parent=CGI_10017695;
	scaffold44098	TRF	Tandem_Repeat	37130	37236	79	+	.	.
scaffold44098	subtractBed	intrn	119806	119952	.	-	.	Parent=CGI_10017702;
	scaffold44098	WUBlastX	LINE_RTE-X	119806	119952	61	-	.	.
scaffold44098	subtractBed	intrn	119701	119952	.	-	.	Parent=CGI_10017702;
	scaffold44098	WUBlastX	LINE_RTE-X	119701	119952	28	-	.	.
scaffold44098	subtractBed	intrn	135829	135957	.	-	.	Parent=CGI_10017702;
	scaffold44098	TRF	Tandem_Repeat	135829	135957	125	+	.	.
scaffold44098	subtractBed	intrn	165169	165169	.	+	.	Parent=CGI_10017705;
	scaffold44098	WUBlastX	DNA_hAT	164861	165169	114	+	.	.
scaffold44098	subtractBed	intrn	165424	165428	.	+	.	Parent=CGI_10017705;
	scaffold44098	WUBlastX	DNA_hAT	165424	165624	65	+	.	.
scaffold44098	subtractBed	intrn	166700	166700	.	+	.	Parent=CGI_10017705;
	scaffold44098	WUBlastX	DNA_hAT	166700	167104	194	+	.	.
scaffold44098	subtractBed	intrn	194094	194237	.	+	.	Parent=CGI_10017708;
	scaffold44098	WUBlastX	LINE_CR1	194094	194237	32	+	.	.
scaffold44098	subtractBed	intrn	194269	195423	.	+	.	Parent=CGI_10017708;
	scaffold44098	WUBlastX	LINE_L2	194269	195423	87	+	.	.
scaffold44098	subtractBed	intrn	194641	195459	.	+	.	Parent=CGI_10017708;
	scaffold44098	WUBlastX	LINE_CR1	194641	195459	476	+	.	.
scaffold44098	subtractBed	intrn	194551	195573	.	+	.	Parent=CGI_10017708;
	scaffold44098	WUBlastX	LINE_CR1	194551	195573	431	+	.	.
scaffold44098	subtractBed	intrn	195545	196384	.	+	.	Parent=CGI_10017708;
	scaffold44098	WUBlastX	LINE_CR1	195545	196384	237	+	.	.
scaffold44098	subtractBed	intrn	202282	202328	.	+	.	Parent=CGI_10017708;
	scaffold44098	TRF	Tandem_Repeat	202282	202328	67	+	.	.
scaffold44098	subtractBed	intrn	202270	202340	.	+	.	Parent=CGI_10017708;
	scaffold44098	TRF	Tandem_Repeat	202270	202340	63	+	.	.
scaffold44098	subtractBed	intrn	202269	202332	.	+	.	Parent=CGI_10017708;
	scaffold44098	TRF	Tandem_Repeat	202269	202332	58	+	.	.
scaffold44098	subtractBed	intrn	238221	238356	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	238203	238356	308	+	.	.
scaffold44098	subtractBed	intrn	238333	238787	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	238333	238787	408	+	.	.
scaffold44098	subtractBed	intrn	238619	238958	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	238619	238958	484	+	.	.
scaffold44098	subtractBed	intrn	238442	238987	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	238442	238987	447	+	.	.
scaffold44098	subtractBed	intrn	238822	238987	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	238822	238987	314	+	.	.
scaffold44098	subtractBed	intrn	240606	240865	.	+	.	Parent=CGI_10017709;
	scaffold44098	TRF	Tandem_Repeat	240606	240865	337	+	.	.
scaffold44098	subtractBed	intrn	262634	262792	.	+	.	Parent=CGI_10017711;
	scaffold44098	TRF	Tandem_Repeat	262634	262792	291	+	.	.
scaffold44098	subtractBed	intrn	262875	262912	.	+	.	Parent=CGI_10017711;
	scaffold44098	TRF	Tandem_Repeat	262875	262912	53	+	.	.
scaffold44098	subtractBed	intrn	263080	264726	.	+	.	Parent=CGI_10017711;
	scaffold44098	TRF	Tandem_Repeat	263080	264726	2144	+	.	.
scaffold44098	subtractBed	intrn	263080	264726	.	+	.	Parent=CGI_10017711;
	scaffold44098	TRF	Tandem_Repeat	263080	264726	2230	+	.	.
scaffold44098	subtractBed	intrn	313251	313382	.	-	.	Parent=CGI_10017713;
	scaffold44098	TRF	Tandem_Repeat	313251	313382	219	+	.	.
scaffold44098	subtractBed	intrn	321264	321389	.	-	.	Parent=CGI_10017714;
	scaffold44098	TRF	Tandem_Repeat	321264	321389	145	+	.	.
scaffold44098	subtractBed	intrn	337425	337451	.	+	.	Parent=CGI_10017715;
	scaffold44098	TRF	Tandem_Repeat	337425	337451	54	+	.	.
scaffold44098	subtractBed	intrn	437105	437158	.	+	.	Parent=CGI_10017721;
	scaffold44098	TRF	Tandem_Repeat	437105	437158	108	+	.	.
scaffold44098	subtractBed	intrn	438865	438909	.	+	.	Parent=CGI_10017721;
	scaffold44098	TRF	Tandem_Repeat	438865	438909	90	+	.	.
scaffold44098	subtractBed	intrn	439404	439438	.	+	.	Parent=CGI_10017721;
	scaffold44098	TRF	Tandem_Repeat	439404	439438	70	+	.	.
scaffold44098	subtractBed	intrn	439765	439817	.	+	.	Parent=CGI_10017721;
	scaffold44098	TRF	Tandem_Repeat	439765	439817	88	+	.	.
scaffold44098	subtractBed	intrn	441433	441677	.	+	.	Parent=CGI_10017721;
	scaffold44098	TRF	Tandem_Repeat	441433	441681	336	+	.	.
scaffold44098	subtractBed	intrn	456785	458670	.	-	.	Parent=CGI_10017723;
	scaffold44098	TRF	Tandem_Repeat	456785	458670	939	+	.	.
scaffold44098	subtractBed	intrn	456831	458670	.	-	.	Parent=CGI_10017723;
	scaffold44098	TRF	Tandem_Repeat	456831	458670	2137	+	.	.
scaffold44098	subtractBed	intrn	473360	473414	.	+	.	Parent=CGI_10017725;
	scaffold44098	TRF	Tandem_Repeat	473360	473414	110	+	.	.
scaffold44098	subtractBed	intrn	480675	480722	.	+	.	Parent=CGI_10017725;
	scaffold44098	TRF	Tandem_Repeat	480675	480722	96	+	.	.
scaffold44098	subtractBed	intrn	484068	484331	.	+	.	Parent=CGI_10017725;
	scaffold44098	TRF	Tandem_Repeat	484068	484331	315	+	.	.
scaffold44098	subtractBed	intrn	485802	486171	.	+	.	Parent=CGI_10017725;
	scaffold44098	TRF	Tandem_Repeat	485802	486171	389	+	.	.
scaffold44098	subtractBed	intrn	485802	486171	.	+	.	Parent=CGI_10017725;
	scaffold44098	TRF	Tandem_Repeat	485802	486171	443	+	.	.
scaffold442	subtractBed	intrn	9107	9150	.	-	.	Parent=CGI_10005512;
	scaffold442	TRF	Tandem_Repeat	9107	9150	88	+	.	.
scaffold443	subtractBed	intrn	159961	159985	.	-	.	Parent=CGI_10022763;
	scaffold443	TRF	Tandem_Repeat	159961	159985	50	+	.	.
scaffold443	subtractBed	intrn	228438	228882	.	-	.	Parent=CGI_10022766;
	scaffold443	TRF	Tandem_Repeat	228421	228882	735	+	.	.
scaffold443	subtractBed	intrn	229498	229566	.	-	.	Parent=CGI_10022766;
	scaffold443	TRF	Tandem_Repeat	229498	229566	108	+	.	.
scaffold443	subtractBed	intrn	260971	261025	.	+	.	Parent=CGI_10022768;
	scaffold443	TRF	Tandem_Repeat	260971	261025	85	+	.	.
scaffold443	subtractBed	intrn	312223	312309	.	+	.	Parent=CGI_10022771;
	scaffold443	TRF	Tandem_Repeat	312223	312309	120	+	.	.
scaffold443	subtractBed	intrn	315714	315761	.	+	.	Parent=CGI_10022771;
	scaffold443	TRF	Tandem_Repeat	315714	315761	96	+	.	.
scaffold443	subtractBed	intrn	330618	330651	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	330618	330651	50	+	.	.
scaffold443	subtractBed	intrn	331243	332302	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	331243	332302	2093	+	.	.
scaffold443	subtractBed	intrn	332859	334181	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	332859	334181	1760	+	.	.
scaffold443	subtractBed	intrn	334427	335596	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	334427	335596	1701	+	.	.
scaffold443	subtractBed	intrn	336332	336728	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	336332	336728	396	+	.	.
scaffold443	subtractBed	intrn	337093	337127	.	+	.	Parent=CGI_10022773;
	scaffold443	TRF	Tandem_Repeat	337093	337127	70	+	.	.
scaffold443	subtractBed	intrn	354099	354239	.	-	.	Parent=CGI_10022774;
	scaffold443	TRF	Tandem_Repeat	354099	354239	221	+	.	.
scaffold443	subtractBed	intrn	354102	354323	.	-	.	Parent=CGI_10022774;
	scaffold443	TRF	Tandem_Repeat	354102	354323	258	+	.	.
scaffold443	subtractBed	intrn	354253	354383	.	-	.	Parent=CGI_10022774;
	scaffold443	TRF	Tandem_Repeat	354253	354383	154	+	.	.
scaffold443	subtractBed	intrn	404803	404834	.	-	.	Parent=CGI_10022775;
	scaffold443	TRF	Tandem_Repeat	404803	404834	55	+	.	.
scaffold443	subtractBed	intrn	408733	409029	.	-	.	Parent=CGI_10022775;
	scaffold443	WUBlastX	LINE_RTE-X	408733	409029	48	-	.	.
scaffold443	subtractBed	intrn	408718	408921	.	-	.	Parent=CGI_10022775;
	scaffold443	WUBlastX	LINE_RTE-X	408718	408921	65	-	.	.
scaffold443	subtractBed	intrn	408757	408933	.	-	.	Parent=CGI_10022775;
	scaffold443	WUBlastX	LINE_RTE-X	408757	408933	72	-	.	.
scaffold443	subtractBed	intrn	418239	418278	.	-	.	Parent=CGI_10022775;
	scaffold443	TRF	Tandem_Repeat	418239	418278	80	+	.	.
scaffold443	subtractBed	intrn	571531	572063	.	-	.	Parent=CGI_10022779;
	scaffold443	TRF	Tandem_Repeat	571514	572063	577	+	.	.
scaffold443	subtractBed	intrn	571531	572063	.	-	.	Parent=CGI_10022779;
	scaffold443	TRF	Tandem_Repeat	571514	572063	554	+	.	.
scaffold443	subtractBed	intrn	599684	600181	.	-	.	Parent=CGI_10022780;
	scaffold443	WUBlastX	DNA_Crypton	599684	600181	24	+	.	.
scaffold443	subtractBed	intrn	674692	674744	.	-	.	Parent=CGI_10022783;
	scaffold443	TRF	Tandem_Repeat	674692	674744	88	+	.	.
scaffold443	subtractBed	intrn	689074	689110	.	+	.	Parent=CGI_10022785;
	scaffold443	TRF	Tandem_Repeat	689074	689110	56	+	.	.
scaffold443	subtractBed	intrn	696301	696853	.	+	.	Parent=CGI_10022785;
	scaffold443	TRF	Tandem_Repeat	696301	696853	314	+	.	.
scaffold443	subtractBed	intrn	696397	696865	.	+	.	Parent=CGI_10022785;
	scaffold443	TRF	Tandem_Repeat	696397	696865	609	+	.	.
scaffold443	subtractBed	intrn	710504	710524	.	-	.	Parent=CGI_10022786;
	scaffold443	WUBlastX	LTR_Gypsy	710054	710524	50	-	.	.
scaffold443	subtractBed	intrn	711377	711435	.	-	.	Parent=CGI_10022786;
	scaffold443	TRF	Tandem_Repeat	711377	711435	118	+	.	.
scaffold443	subtractBed	intrn	719826	720468	.	-	.	Parent=CGI_10022787;
	scaffold443	TRF	Tandem_Repeat	719826	720468	543	+	.	.
scaffold443	subtractBed	intrn	719826	720468	.	-	.	Parent=CGI_10022787;
	scaffold443	TRF	Tandem_Repeat	719826	720468	613	+	.	.
scaffold443	subtractBed	intrn	719826	720468	.	-	.	Parent=CGI_10022787;
	scaffold443	TRF	Tandem_Repeat	719826	720468	387	+	.	.
scaffold443	subtractBed	intrn	742629	742673	.	+	.	Parent=CGI_10022788;
	scaffold443	TRF	Tandem_Repeat	742629	742673	90	+	.	.
scaffold443	subtractBed	intrn	761701	761794	.	+	.	Parent=CGI_10022789;
	scaffold443	TRF	Tandem_Repeat	761701	761794	179	+	.	.
scaffold444	subtractBed	intrn	492427	492482	.	-	.	Parent=CGI_10017440;
	scaffold444	TRF	Tandem_Repeat	492427	492482	112	+	.	.
scaffold444	subtractBed	intrn	495581	495620	.	-	.	Parent=CGI_10017440;
	scaffold444	TRF	Tandem_Repeat	495581	495620	80	+	.	.
scaffold444	subtractBed	intrn	496491	496526	.	-	.	Parent=CGI_10017440;
	scaffold444	TRF	Tandem_Repeat	496491	496526	72	+	.	.
scaffold445	subtractBed	intrn	5677	6637	.	-	.	Parent=CGI_10019421;
	scaffold445	TRF	Tandem_Repeat	5677	6637	1412	+	.	.
scaffold445	subtractBed	intrn	6668	6703	.	-	.	Parent=CGI_10019421;
	scaffold445	TRF	Tandem_Repeat	6668	6703	63	+	.	.
scaffold445	subtractBed	intrn	13834	14083	.	-	.	Parent=CGI_10019422;
	scaffold445	TRF	Tandem_Repeat	13834	14083	92	+	.	.
scaffold445	subtractBed	intrn	14986	15752	.	-	.	Parent=CGI_10019422;
	scaffold445	TRF	Tandem_Repeat	14986	15752	912	+	.	.
scaffold445	subtractBed	intrn	19271	19381	.	-	.	Parent=CGI_10019422;
	scaffold445	TRF	Tandem_Repeat	19271	19381	120	+	.	.
scaffold445	subtractBed	intrn	19391	19601	.	-	.	Parent=CGI_10019422;
	scaffold445	TRF	Tandem_Repeat	19391	19601	323	+	.	.
scaffold445	subtractBed	intrn	47211	47237	.	-	.	Parent=CGI_10019427;
	scaffold445	TRF	Tandem_Repeat	47211	47237	54	+	.	.
scaffold445	subtractBed	intrn	49089	49144	.	-	.	Parent=CGI_10019427;
	scaffold445	TRF	Tandem_Repeat	49089	49144	53	+	.	.
scaffold445	subtractBed	intrn	150374	150425	.	-	.	Parent=CGI_10019429;
	scaffold445	TRF	Tandem_Repeat	150374	150425	104	+	.	.
scaffold445	subtractBed	intrn	162146	162690	.	-	.	Parent=CGI_10019430;
	scaffold445	TRF	Tandem_Repeat	162146	162690	624	+	.	.
scaffold445	subtractBed	intrn	162174	162690	.	-	.	Parent=CGI_10019430;
	scaffold445	TRF	Tandem_Repeat	162174	162690	705	+	.	.
scaffold445	subtractBed	intrn	162174	162690	.	-	.	Parent=CGI_10019430;
	scaffold445	TRF	Tandem_Repeat	162174	162690	748	+	.	.
scaffold445	subtractBed	intrn	162146	162690	.	+	.	Parent=CGI_10019431;
	scaffold445	TRF	Tandem_Repeat	162146	162690	624	+	.	.
scaffold445	subtractBed	intrn	162174	162690	.	+	.	Parent=CGI_10019431;
	scaffold445	TRF	Tandem_Repeat	162174	162690	705	+	.	.
scaffold445	subtractBed	intrn	162174	162690	.	+	.	Parent=CGI_10019431;
	scaffold445	TRF	Tandem_Repeat	162174	162690	748	+	.	.
scaffold445	subtractBed	intrn	173372	173611	.	+	.	Parent=CGI_10019431;
	scaffold445	WUBlastX	LINE_RTE-X	173372	173611	57	-	.	.
scaffold445	subtractBed	intrn	173303	173629	.	+	.	Parent=CGI_10019431;
	scaffold445	WUBlastX	LINE_RTE-X	173303	173629	30	-	.	.
scaffold445	subtractBed	intrn	174015	174257	.	+	.	Parent=CGI_10019431;
	scaffold445	WUBlastX	DNA_Kolobok	174015	174257	60	+	.	.
scaffold445	subtractBed	intrn	174926	174936	.	+	.	Parent=CGI_10019431;
	scaffold445	WUBlastX	DNA_Kolobok	174926	175063	21	+	.	.
scaffold445	subtractBed	intrn	173438	173665	.	+	.	Parent=CGI_10019431;
	scaffold445	WUBlastX	LINE_RTE-X	173438	173665	37	-	.	.
scaffold445	subtractBed	intrn	173372	173611	.	-	.	Parent=CGI_10019432;
	scaffold445	WUBlastX	LINE_RTE-X	173372	173611	57	-	.	.
scaffold445	subtractBed	intrn	173303	173629	.	-	.	Parent=CGI_10019432;
	scaffold445	WUBlastX	LINE_RTE-X	173303	173629	30	-	.	.
scaffold445	subtractBed	intrn	174015	174257	.	-	.	Parent=CGI_10019432;
	scaffold445	WUBlastX	DNA_Kolobok	174015	174257	60	+	.	.
scaffold445	subtractBed	intrn	174926	174936	.	-	.	Parent=CGI_10019432;
	scaffold445	WUBlastX	DNA_Kolobok	174926	175063	21	+	.	.
scaffold445	subtractBed	intrn	173438	173665	.	-	.	Parent=CGI_10019432;
	scaffold445	WUBlastX	LINE_RTE-X	173438	173665	37	-	.	.
scaffold445	subtractBed	intrn	198720	198903	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	198720	198903	228	+	.	.
scaffold445	subtractBed	intrn	198944	198984	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	198944	198984	82	+	.	.
scaffold445	subtractBed	intrn	200522	200836	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	200500	200836	579	+	.	.
scaffold445	subtractBed	intrn	204408	204655	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	204408	204655	241	+	.	.
scaffold445	subtractBed	intrn	205779	205809	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	205779	205809	62	+	.	.
scaffold445	subtractBed	intrn	205877	205918	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	205877	205918	77	+	.	.
scaffold445	subtractBed	intrn	208030	208069	.	-	.	Parent=CGI_10019435;
	scaffold445	TRF	Tandem_Repeat	208030	208069	80	+	.	.
scaffold445	subtractBed	intrn	249419	249463	.	+	.	Parent=CGI_10019439;
	scaffold445	TRF	Tandem_Repeat	249419	249463	90	+	.	.
scaffold445	subtractBed	intrn	313910	314011	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	313910	314011	159	+	.	.
scaffold445	subtractBed	intrn	315207	315260	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	315207	315260	108	+	.	.
scaffold445	subtractBed	intrn	318626	318670	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	318626	318670	81	+	.	.
scaffold445	subtractBed	intrn	324237	324596	.	-	.	Parent=CGI_10019444;
	scaffold445	WUBlastX	LINE_R2-Hero	324237	324596	64	+	.	.
scaffold445	subtractBed	intrn	324240	324512	.	-	.	Parent=CGI_10019444;
	scaffold445	WUBlastX	LINE_R2-Hero	324240	324512	67	+	.	.
scaffold445	subtractBed	intrn	321126	321326	.	-	.	Parent=CGI_10019444;
	scaffold445	WUBlastX	LTR_Gypsy	321126	321326	61	-	.	.
scaffold445	subtractBed	intrn	321093	321467	.	-	.	Parent=CGI_10019444;
	scaffold445	WUBlastX	LTR_Gypsy-Cigr	321093	321467	39	-	.	.
scaffold445	subtractBed	intrn	329506	329550	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	329506	329550	76	+	.	.
scaffold445	subtractBed	intrn	329505	329548	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	329505	329548	70	+	.	.
scaffold445	subtractBed	intrn	336080	336120	.	-	.	Parent=CGI_10019444;
	scaffold445	TRF	Tandem_Repeat	336080	336120	82	+	.	.
scaffold445	subtractBed	intrn	345827	345888	.	+	.	Parent=CGI_10019446;
	scaffold445	TRF	Tandem_Repeat	345827	345888	117	+	.	.
scaffold445	subtractBed	intrn	364373	364941	.	-	.	Parent=CGI_10019447;
	scaffold445	TRF	Tandem_Repeat	364373	364941	221	+	.	.
scaffold445	subtractBed	intrn	364656	364943	.	-	.	Parent=CGI_10019447;
	scaffold445	TRF	Tandem_Repeat	364656	364943	227	+	.	.
scaffold445	subtractBed	intrn	375393	375437	.	+	.	Parent=CGI_10019448;
	scaffold445	TRF	Tandem_Repeat	375393	375437	90	+	.	.
scaffold445	subtractBed	intrn	425556	425613	.	-	.	Parent=CGI_10019449;
	scaffold445	TRF	Tandem_Repeat	425556	425613	116	+	.	.
scaffold445	subtractBed	intrn	448976	449018	.	-	.	Parent=CGI_10019450;
	scaffold445	TRF	Tandem_Repeat	448976	449018	86	+	.	.
scaffold445	subtractBed	intrn	525974	526034	.	-	.	Parent=CGI_10019451;
	scaffold445	TRF	Tandem_Repeat	525974	526034	106	+	.	.
scaffold445	subtractBed	intrn	583889	583950	.	+	.	Parent=CGI_10019458;
	scaffold445	TRF	Tandem_Repeat	583889	583950	115	+	.	.
scaffold446	subtractBed	intrn	67771	67813	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	67771	67813	86	+	.	.
scaffold446	subtractBed	intrn	79159	79372	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	79159	79372	392	+	.	.
scaffold446	subtractBed	intrn	83821	83853	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	83821	83853	57	+	.	.
scaffold446	subtractBed	intrn	85797	85837	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	85797	85837	73	+	.	.
scaffold446	subtractBed	intrn	104819	104857	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	104819	104857	60	+	.	.
scaffold446	subtractBed	intrn	122858	122912	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	122858	122912	65	+	.	.
scaffold446	subtractBed	intrn	122858	122903	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	122858	122903	65	+	.	.
scaffold446	subtractBed	intrn	126389	127708	.	+	.	Parent=CGI_10007979;
	scaffold446	TRF	Tandem_Repeat	126389	127708	1261	+	.	.
scaffold447	subtractBed	intrn	20533	21710	.	+	.	Parent=CGI_10014216;
	scaffold447	TRF	Tandem_Repeat	20533	21710	1646	+	.	.
scaffold447	subtractBed	intrn	29590	29898	.	+	.	Parent=CGI_10014216;
	scaffold447	WUBlastX	LINE_L1	29590	29898	45	+	.	.
scaffold447	subtractBed	intrn	29440	29808	.	+	.	Parent=CGI_10014216;
	scaffold447	WUBlastX	LINE_L1-Tx1	29440	29808	45	+	.	.
scaffold447	subtractBed	intrn	29362	29811	.	+	.	Parent=CGI_10014216;
	scaffold447	WUBlastX	LINE_L1-Tx1	29362	29811	27	+	.	.
scaffold447	subtractBed	intrn	31638	31925	.	+	.	Parent=CGI_10014216;
	scaffold447	TRF	Tandem_Repeat	31638	31925	264	+	.	.
scaffold447	subtractBed	intrn	33359	33394	.	+	.	Parent=CGI_10014216;
	scaffold447	TRF	Tandem_Repeat	33359	33394	63	+	.	.
scaffold447	subtractBed	intrn	54919	54967	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	54919	54967	98	+	.	.
scaffold447	subtractBed	intrn	60815	61314	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	60815	61314	348	+	.	.
scaffold447	subtractBed	intrn	60815	60942	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	60815	60942	85	+	.	.
scaffold447	subtractBed	intrn	61025	61189	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	61025	61189	84	+	.	.
scaffold447	subtractBed	intrn	61016	61154	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	61016	61154	107	+	.	.
scaffold447	subtractBed	intrn	61223	61307	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	61223	61307	65	+	.	.
scaffold447	subtractBed	intrn	61234	61307	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	61234	61307	67	+	.	.
scaffold447	subtractBed	intrn	63126	63770	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63126	63770	369	+	.	.
scaffold447	subtractBed	intrn	63126	63760	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63126	63760	453	+	.	.
scaffold447	subtractBed	intrn	63126	63343	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63126	63343	150	+	.	.
scaffold447	subtractBed	intrn	63426	63757	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63426	63757	90	+	.	.
scaffold447	subtractBed	intrn	63423	63544	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63423	63544	127	+	.	.
scaffold447	subtractBed	intrn	63629	63760	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63629	63760	68	+	.	.
scaffold447	subtractBed	intrn	63942	63999	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	63942	63999	53	+	.	.
scaffold447	subtractBed	intrn	64356	64829	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	64356	64829	94	+	.	.
scaffold447	subtractBed	intrn	64638	64744	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	64638	64744	65	+	.	.
scaffold447	subtractBed	intrn	64677	64742	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	64677	64742	51	+	.	.
scaffold447	subtractBed	intrn	64661	64811	.	-	.	Parent=CGI_10014218;
	scaffold447	TRF	Tandem_Repeat	64661	64811	152	+	.	.
scaffold447	subtractBed	intrn	144851	145213	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	144851	145213	575	+	.	.
scaffold447	subtractBed	intrn	145179	145347	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	145179	145347	118	+	.	.
scaffold447	subtractBed	intrn	145939	146122	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	145939	146122	111	+	.	.
scaffold447	subtractBed	intrn	145939	146093	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	145939	146093	125	+	.	.
scaffold447	subtractBed	intrn	145956	146162	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	145956	146162	175	+	.	.
scaffold447	subtractBed	intrn	154535	154586	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	154535	154586	77	+	.	.
scaffold447	subtractBed	intrn	163007	163330	.	-	.	Parent=CGI_10014219;
	scaffold447	TRF	Tandem_Repeat	163007	163330	252	+	.	.
scaffold447	subtractBed	intrn	172386	172732	.	+	.	Parent=CGI_10014220;
	scaffold447	TRF	Tandem_Repeat	172374	172732	560	+	.	.
scaffold447	subtractBed	intrn	184039	184306	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	184039	184306	244	+	.	.
scaffold447	subtractBed	intrn	184127	184314	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	184127	184314	331	+	.	.
scaffold447	subtractBed	intrn	185924	186004	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	185924	186004	103	+	.	.
scaffold447	subtractBed	intrn	186256	186299	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	186256	186299	61	+	.	.
scaffold447	subtractBed	intrn	187185	187284	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	187185	187284	107	+	.	.
scaffold447	subtractBed	intrn	187186	187284	.	-	.	Parent=CGI_10014222;
	scaffold447	TRF	Tandem_Repeat	187186	187284	128	+	.	.
scaffold447	subtractBed	intrn	221864	222679	.	+	.	Parent=CGI_10014225;
	scaffold447	WUBlastX	DNA_Harbinger	221864	222679	317	-	.	.
scaffold447	subtractBed	intrn	238786	239032	.	+	.	Parent=CGI_10014227;
	scaffold447	TRF	Tandem_Repeat	238786	239032	255	+	.	.
scaffold447	subtractBed	intrn	305282	305332	.	-	.	Parent=CGI_10014231;
	scaffold447	TRF	Tandem_Repeat	305282	305332	66	+	.	.
scaffold447	subtractBed	intrn	305283	305321	.	-	.	Parent=CGI_10014231;
	scaffold447	TRF	Tandem_Repeat	305283	305321	51	+	.	.
scaffold447	subtractBed	intrn	337298	337948	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_CR1	337298	337948	34	-	.	.
scaffold447	subtractBed	intrn	335448	335516	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	335448	335516	40	-	.	.
scaffold447	subtractBed	intrn	335522	335719	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	335522	335719	100	-	.	.
scaffold447	subtractBed	intrn	335710	335952	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	335710	335952	247	-	.	.
scaffold447	subtractBed	intrn	335952	336188	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	335952	336188	281	-	.	.
scaffold447	subtractBed	intrn	336200	337837	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	336200	337837	1477	-	.	.
scaffold447	subtractBed	intrn	335477	335734	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	335477	335734	65	-	.	.
scaffold447	subtractBed	intrn	335418	335522	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_Rex-Babar	335418	335522	27	-	.	.
scaffold447	subtractBed	intrn	336177	336248	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-BovB	336177	336248	22	-	.	.
scaffold447	subtractBed	intrn	334408	334446	.	+	.	Parent=CGI_10014233;
	scaffold447	WUBlastX	LINE_RTE-X	334408	334446	22	-	.	.
scaffold447	subtractBed	intrn	370011	370308	.	+	.	Parent=CGI_10014236;
	scaffold447	TRF	Tandem_Repeat	370011	370308	264	+	.	.
scaffold447	subtractBed	intrn	371884	371979	.	+	.	Parent=CGI_10014236;
	scaffold447	TRF	Tandem_Repeat	371884	371979	84	+	.	.
scaffold447	subtractBed	intrn	390373	390483	.	+	.	Parent=CGI_10014236;
	scaffold447	WUBlastX	LINE_RTE-X	390373	390483	51	+	.	.
scaffold448	subtractBed	intrn	27391	27705	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS?	27391	27705	135	-	.	.
scaffold448	subtractBed	intrn	29473	29712	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS	29473	29712	64	-	.	.
scaffold448	subtractBed	intrn	28731	29282	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS	28731	29282	131	-	.	.
scaffold448	subtractBed	intrn	29356	29727	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS	29356	29727	59	-	.	.
scaffold448	subtractBed	intrn	29861	29962	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS	29861	29962	22	-	.	.
scaffold448	subtractBed	intrn	27625	28212	.	+	.	Parent=CGI_10024928;
	scaffold448	WUBlastX	LTR_DIRS	27625	28212	22	-	.	.
scaffold448	subtractBed	intrn	62175	63006	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	62175	63006	1175	+	.	.
scaffold448	subtractBed	intrn	62081	63009	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	62081	63009	1043	+	.	.
scaffold448	subtractBed	intrn	64085	64142	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	64085	64142	116	+	.	.
scaffold448	subtractBed	intrn	66214	66546	.	+	.	Parent=CGI_10024929;
	scaffold448	WUBlastX	LINE_L2	66214	66546	59	+	.	.
scaffold448	subtractBed	intrn	66921	67007	.	+	.	Parent=CGI_10024929;
	scaffold448	WUBlastX	LINE_CR1	66921	67007	20	+	.	.
scaffold448	subtractBed	intrn	66612	66758	.	+	.	Parent=CGI_10024929;
	scaffold448	WUBlastX	LINE_CR1-L2	66612	66758	45	+	.	.
scaffold448	subtractBed	intrn	66749	66925	.	+	.	Parent=CGI_10024929;
	scaffold448	WUBlastX	LINE_CR1-L2	66749	66925	21	+	.	.
scaffold448	subtractBed	intrn	70611	70654	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	70611	70654	61	+	.	.
scaffold448	subtractBed	intrn	83978	84030	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	83978	84030	65	+	.	.
scaffold448	subtractBed	intrn	84582	84621	.	+	.	Parent=CGI_10024929;
	scaffold448	TRF	Tandem_Repeat	84582	84621	71	+	.	.
scaffold448	subtractBed	intrn	92449	92474	.	-	.	Parent=CGI_10024930;
	scaffold448	TRF	Tandem_Repeat	92449	92474	52	+	.	.
scaffold448	subtractBed	intrn	141943	141996	.	+	.	Parent=CGI_10024933;
	scaffold448	TRF	Tandem_Repeat	141943	141996	108	+	.	.
scaffold448	subtractBed	intrn	157145	157193	.	+	.	Parent=CGI_10024934;
	scaffold448	TRF	Tandem_Repeat	157145	157193	98	+	.	.
scaffold448	subtractBed	intrn	157872	157979	.	+	.	Parent=CGI_10024934;
	scaffold448	WUBlastX	DNA_Harbinger	157872	157979	43	-	.	.
scaffold448	subtractBed	intrn	157984	158913	.	+	.	Parent=CGI_10024934;
	scaffold448	WUBlastX	DNA_Harbinger	157984	158913	708	-	.	.
scaffold448	subtractBed	intrn	213766	213768	.	+	.	Parent=CGI_10024936;
	scaffold448	WUBlastX	DNA_Kolobok-Hyd	213247	213768	25	+	.	.
scaffold448	subtractBed	intrn	213766	213768	.	+	.	Parent=CGI_10024936;
	scaffold448	WUBlastX	DNA_Kolobok-Hyd	213343	213768	43	+	.	.
scaffold448	subtractBed	intrn	402127	402183	.	-	.	Parent=CGI_10024943;
	scaffold448	TRF	Tandem_Repeat	402127	402183	114	+	.	.
scaffold448	subtractBed	intrn	404208	404261	.	-	.	Parent=CGI_10024943;
	scaffold448	TRF	Tandem_Repeat	404208	404261	108	+	.	.
scaffold448	subtractBed	intrn	409461	409494	.	-	.	Parent=CGI_10024943;
	scaffold448	TRF	Tandem_Repeat	409461	409494	68	+	.	.
scaffold448	subtractBed	intrn	420091	420125	.	+	.	Parent=CGI_10024944;
	scaffold448	TRF	Tandem_Repeat	420091	420125	70	+	.	.
scaffold448	subtractBed	intrn	422986	423122	.	+	.	Parent=CGI_10024944;
	scaffold448	TRF	Tandem_Repeat	422986	423122	177	+	.	.
scaffold448	subtractBed	intrn	427230	427265	.	+	.	Parent=CGI_10024944;
	scaffold448	TRF	Tandem_Repeat	427230	427265	72	+	.	.
scaffold448	subtractBed	intrn	439509	439561	.	+	.	Parent=CGI_10024948;
	scaffold448	TRF	Tandem_Repeat	439509	439561	65	+	.	.
scaffold448	subtractBed	intrn	439748	440005	.	+	.	Parent=CGI_10024948;
	scaffold448	TRF	Tandem_Repeat	439748	440005	141	+	.	.
scaffold448	subtractBed	intrn	439681	440194	.	+	.	Parent=CGI_10024948;
	scaffold448	TRF	Tandem_Repeat	439681	440194	913	+	.	.
scaffold448	subtractBed	intrn	498130	498193	.	-	.	Parent=CGI_10024950;
	scaffold448	TRF	Tandem_Repeat	498130	498193	103	+	.	.
scaffold448	subtractBed	intrn	518300	518438	.	+	.	Parent=CGI_10024951;
	scaffold448	TRF	Tandem_Repeat	518300	518438	214	+	.	.
scaffold448	subtractBed	intrn	654807	654843	.	+	.	Parent=CGI_10024954;
	scaffold448	TRF	Tandem_Repeat	654807	654843	74	+	.	.
scaffold448	subtractBed	intrn	663561	663617	.	+	.	Parent=CGI_10024956;
	scaffold448	TRF	Tandem_Repeat	663561	663617	114	+	.	.
scaffold448	subtractBed	intrn	733741	733877	.	+	.	Parent=CGI_10024961;
	scaffold448	TRF	Tandem_Repeat	733741	733877	184	+	.	.
scaffold448	subtractBed	intrn	738051	738095	.	+	.	Parent=CGI_10024961;
	scaffold448	TRF	Tandem_Repeat	738051	738095	65	+	.	.
scaffold448	subtractBed	intrn	746520	746561	.	+	.	Parent=CGI_10024961;
	scaffold448	TRF	Tandem_Repeat	746520	746561	68	+	.	.
scaffold448	subtractBed	intrn	746521	746558	.	+	.	Parent=CGI_10024961;
	scaffold448	TRF	Tandem_Repeat	746521	746558	51	+	.	.
scaffold448	subtractBed	intrn	753598	753628	.	+	.	Parent=CGI_10024962;
	scaffold448	TRF	Tandem_Repeat	753598	753628	62	+	.	.
scaffold448	subtractBed	intrn	761673	761719	.	+	.	Parent=CGI_10024962;
	scaffold448	TRF	Tandem_Repeat	761673	761719	57	+	.	.
scaffold448	subtractBed	intrn	777506	778807	.	+	.	Parent=CGI_10024962;
	scaffold448	TRF	Tandem_Repeat	777506	778807	1559	+	.	.
scaffold448	subtractBed	intrn	778845	779922	.	+	.	Parent=CGI_10024962;
	scaffold448	TRF	Tandem_Repeat	778845	779922	1238	+	.	.
scaffold448	subtractBed	intrn	826180	826386	.	-	.	Parent=CGI_10024963;
	scaffold448	TRF	Tandem_Repeat	826180	826386	224	+	.	.
scaffold448	subtractBed	intrn	826180	826385	.	-	.	Parent=CGI_10024963;
	scaffold448	TRF	Tandem_Repeat	826180	826385	306	+	.	.
scaffold448	subtractBed	intrn	827255	827523	.	-	.	Parent=CGI_10024963;
	scaffold448	TRF	Tandem_Repeat	827255	827523	341	+	.	.
scaffold448	subtractBed	intrn	841164	841205	.	+	.	Parent=CGI_10024964;
	scaffold448	TRF	Tandem_Repeat	841164	841205	84	+	.	.
scaffold448	subtractBed	intrn	870126	870159	.	-	.	Parent=CGI_10024966;
	scaffold448	TRF	Tandem_Repeat	870126	870159	61	+	.	.
scaffold448	subtractBed	intrn	871782	871809	.	-	.	Parent=CGI_10024966;
	scaffold448	TRF	Tandem_Repeat	871782	871809	56	+	.	.
scaffold448	subtractBed	intrn	883699	884043	.	-	.	Parent=CGI_10024967;
	scaffold448	TRF	Tandem_Repeat	883699	884043	344	+	.	.
scaffold448	subtractBed	intrn	883699	884043	.	-	.	Parent=CGI_10024967;
	scaffold448	TRF	Tandem_Repeat	883699	884043	310	+	.	.
scaffold448	subtractBed	intrn	921705	921774	.	-	.	Parent=CGI_10024970;
	scaffold448	TRF	Tandem_Repeat	921705	921774	140	+	.	.
scaffold448	subtractBed	intrn	941743	941860	.	-	.	Parent=CGI_10024970;
	scaffold448	TRF	Tandem_Repeat	941743	941860	92	+	.	.
scaffold448	subtractBed	intrn	941785	941872	.	-	.	Parent=CGI_10024970;
	scaffold448	TRF	Tandem_Repeat	941785	941872	176	+	.	.
scaffold448	subtractBed	intrn	921705	921774	.	+	.	Parent=CGI_10024971;
	scaffold448	TRF	Tandem_Repeat	921705	921774	140	+	.	.
scaffold448	subtractBed	intrn	964607	964688	.	+	.	Parent=CGI_10024972;
	scaffold448	TRF	Tandem_Repeat	964607	964688	157	+	.	.
scaffold448	subtractBed	intrn	983617	983658	.	+	.	Parent=CGI_10024974;
	scaffold448	TRF	Tandem_Repeat	983617	983658	59	+	.	.
scaffold449	subtractBed	intrn	60458	60513	.	+	.	Parent=CGI_10010961;
	scaffold449	TRF	Tandem_Repeat	60458	60513	112	+	.	.
scaffold449	subtractBed	intrn	185093	185533	.	-	.	Parent=CGI_10010963;
	scaffold449	WUBlastX	LINE_CR1-L2	183725	185533	810	-	.	.
scaffold449	subtractBed	intrn	185579	186016	.	-	.	Parent=CGI_10010963;
	scaffold449	WUBlastX	LINE_CR1-L2	185579	186016	119	-	.	.
scaffold449	subtractBed	intrn	185093	185857	.	-	.	Parent=CGI_10010963;
	scaffold449	WUBlastX	LINE_L2	183776	185857	500	-	.	.
scaffold449	subtractBed	intrn	193138	193201	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193138	193201	51	+	.	.
scaffold449	subtractBed	intrn	193271	193394	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193271	193394	59	+	.	.
scaffold449	subtractBed	intrn	193384	193465	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193384	193465	51	+	.	.
scaffold449	subtractBed	intrn	193540	193633	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193540	193633	52	+	.	.
scaffold449	subtractBed	intrn	193586	193679	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193586	193679	72	+	.	.
scaffold449	subtractBed	intrn	193845	193925	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	193845	193925	51	+	.	.
scaffold449	subtractBed	intrn	194517	195056	.	-	.	Parent=CGI_10010963;
	scaffold449	TRF	Tandem_Repeat	194517	195056	873	+	.	.
scaffold449	subtractBed	intrn	237390	238052	.	-	.	Parent=CGI_10010965;
	scaffold449	TRF	Tandem_Repeat	237390	238052	1019	+	.	.
scaffold449	subtractBed	intrn	249902	250989	.	-	.	Parent=CGI_10010967;
	scaffold449	TRF	Tandem_Repeat	249902	250989	1556	+	.	.
scaffold449	subtractBed	intrn	258553	258770	.	-	.	Parent=CGI_10010967;
	scaffold449	TRF	Tandem_Repeat	258553	258770	267	+	.	.
scaffold449	subtractBed	intrn	262579	262623	.	-	.	Parent=CGI_10010967;
	scaffold449	TRF	Tandem_Repeat	262579	262623	90	+	.	.
scaffold450	subtractBed	intrn	67987	68083	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	67987	68083	90	+	.	.
scaffold450	subtractBed	intrn	68437	68563	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	68437	68563	218	+	.	.
scaffold450	subtractBed	intrn	73187	73222	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	73187	73222	72	+	.	.
scaffold450	subtractBed	intrn	74250	74276	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	74250	74276	54	+	.	.
scaffold450	subtractBed	intrn	76450	76487	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	76450	76487	58	+	.	.
scaffold450	subtractBed	intrn	78011	78046	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	78011	78046	63	+	.	.
scaffold450	subtractBed	intrn	78045	78091	.	-	.	Parent=CGI_10010319;
	scaffold450	TRF	Tandem_Repeat	78045	78091	94	+	.	.
scaffold450	subtractBed	intrn	79786	80043	.	-	.	Parent=CGI_10010319;
	scaffold450	WUBlastX	LTR_Gypsy	79786	80043	141	-	.	.
scaffold450	subtractBed	intrn	79714	79764	.	-	.	Parent=CGI_10010319;
	scaffold450	WUBlastX	LTR_Gypsy	79714	79764	21	-	.	.
scaffold450	subtractBed	intrn	79735	80106	.	-	.	Parent=CGI_10010319;
	scaffold450	WUBlastX	LTR_Gypsy	79735	80106	109	-	.	.
scaffold450	subtractBed	intrn	83186	83233	.	-	.	Parent=CGI_10010320;
	scaffold450	TRF	Tandem_Repeat	83186	83233	87	+	.	.
scaffold450	subtractBed	intrn	89096	89168	.	-	.	Parent=CGI_10010320;
	scaffold450	TRF	Tandem_Repeat	89096	89168	58	+	.	.
scaffold450	subtractBed	intrn	89118	89196	.	-	.	Parent=CGI_10010320;
	scaffold450	TRF	Tandem_Repeat	89118	89196	68	+	.	.
scaffold450	subtractBed	intrn	89117	89200	.	-	.	Parent=CGI_10010320;
	scaffold450	TRF	Tandem_Repeat	89117	89200	70	+	.	.
scaffold450	subtractBed	intrn	89126	89202	.	-	.	Parent=CGI_10010320;
	scaffold450	TRF	Tandem_Repeat	89126	89202	59	+	.	.
scaffold450	subtractBed	intrn	111724	111993	.	-	.	Parent=CGI_10010321;
	scaffold450	WUBlastX	LTR_DIRS	111724	111993	154	+	.	.
scaffold450	subtractBed	intrn	158531	158609	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	158531	158609	95	+	.	.
scaffold450	subtractBed	intrn	159052	159151	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	159052	159151	119	+	.	.
scaffold450	subtractBed	intrn	159286	159321	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	159286	159321	72	+	.	.
scaffold450	subtractBed	intrn	159965	159996	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	159965	159996	64	+	.	.
scaffold450	subtractBed	intrn	160820	160879	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	160820	160879	120	+	.	.
scaffold450	subtractBed	intrn	160821	161040	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	160821	161040	77	+	.	.
scaffold450	subtractBed	intrn	160825	161032	.	-	.	Parent=CGI_10010322;
	scaffold450	TRF	Tandem_Repeat	160825	161032	67	+	.	.
scaffold450	subtractBed	intrn	224408	224455	.	-	.	Parent=CGI_10010326;
	scaffold450	TRF	Tandem_Repeat	224408	224455	96	+	.	.
scaffold450	subtractBed	intrn	228748	228792	.	-	.	Parent=CGI_10010326;
	scaffold450	TRF	Tandem_Repeat	228748	228792	72	+	.	.
scaffold451	subtractBed	intrn	64255	64506	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Copia	64255	64506	36	+	.	.
scaffold451	subtractBed	intrn	63260	63817	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy-Cigr	63260	63817	49	+	.	.
scaffold451	subtractBed	intrn	63215	63703	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy-Cigr	63215	63703	68	+	.	.
scaffold451	subtractBed	intrn	63980	64261	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	63980	64261	56	+	.	.
scaffold451	subtractBed	intrn	63962	64027	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	63962	64027	20	+	.	.
scaffold451	subtractBed	intrn	66854	67153	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66854	67153	120	+	.	.
scaffold451	subtractBed	intrn	66730	66807	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66730	66807	36	+	.	.
scaffold451	subtractBed	intrn	66788	67033	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66788	67033	43	+	.	.
scaffold451	subtractBed	intrn	66845	67234	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66845	67234	89	+	.	.
scaffold451	subtractBed	intrn	66694	66807	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66694	66807	31	+	.	.
scaffold451	subtractBed	intrn	67470	67535	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	67470	67535	20	+	.	.
scaffold451	subtractBed	intrn	66854	67369	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	66854	67369	85	+	.	.
scaffold451	subtractBed	intrn	64759	66339	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	64759	66339	1022	+	.	.
scaffold451	subtractBed	intrn	64351	66273	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LTR_Gypsy	64351	66273	1003	+	.	.
scaffold451	subtractBed	intrn	87696	88256	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LINE_L1	87696	88256	54	+	.	.
scaffold451	subtractBed	intrn	88494	88589	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LINE_L1-Tx1	88494	88589	26	+	.	.
scaffold451	subtractBed	intrn	87696	88574	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LINE_L1-Tx1	87696	88574	24	+	.	.
scaffold451	subtractBed	intrn	87681	87845	.	+	.	Parent=CGI_10004427;
	scaffold451	WUBlastX	LINE_L1	87681	87845	62	+	.	.
scaffold452	subtractBed	intrn	66051	66347	.	+	.	Parent=CGI_10007651;
	scaffold452	TRF	Tandem_Repeat	66051	66347	475	+	.	.
scaffold452	subtractBed	intrn	79855	80103	.	+	.	Parent=CGI_10007652;
	scaffold452	TRF	Tandem_Repeat	79855	80103	169	+	.	.
scaffold452	subtractBed	intrn	79881	80103	.	+	.	Parent=CGI_10007652;
	scaffold452	TRF	Tandem_Repeat	79881	80103	200	+	.	.
scaffold452	subtractBed	intrn	80438	80967	.	+	.	Parent=CGI_10007652;
	scaffold452	TRF	Tandem_Repeat	80438	80967	410	+	.	.
scaffold452	subtractBed	intrn	80442	80967	.	+	.	Parent=CGI_10007652;
	scaffold452	TRF	Tandem_Repeat	80442	80967	384	+	.	.
scaffold452	subtractBed	intrn	80407	80967	.	+	.	Parent=CGI_10007652;
	scaffold452	TRF	Tandem_Repeat	80407	80967	529	+	.	.
scaffold452	subtractBed	intrn	92519	93992	.	-	.	Parent=CGI_10007654;
	scaffold452	TRF	Tandem_Repeat	92519	93992	2462	+	.	.
scaffold452	subtractBed	intrn	95661	95854	.	-	.	Parent=CGI_10007655;
	scaffold452	TRF	Tandem_Repeat	95661	95854	324	+	.	.
scaffold452	subtractBed	intrn	96106	96365	.	-	.	Parent=CGI_10007655;
	scaffold452	TRF	Tandem_Repeat	96106	96365	475	+	.	.
scaffold452	subtractBed	intrn	97109	98231	.	-	.	Parent=CGI_10007655;
	scaffold452	TRF	Tandem_Repeat	97109	98231	2039	+	.	.
scaffold452	subtractBed	intrn	102854	102886	.	-	.	Parent=CGI_10007655;
	scaffold452	TRF	Tandem_Repeat	102854	102886	57	+	.	.
scaffold452	subtractBed	intrn	130313	130352	.	-	.	Parent=CGI_10007657;
	scaffold452	TRF	Tandem_Repeat	130313	130352	71	+	.	.
scaffold452	subtractBed	intrn	130420	130940	.	-	.	Parent=CGI_10007657;
	scaffold452	TRF	Tandem_Repeat	130420	130964	614	+	.	.
scaffold452	subtractBed	intrn	131051	131153	.	-	.	Parent=CGI_10007657;
	scaffold452	TRF	Tandem_Repeat	131051	131153	206	+	.	.
scaffold452	subtractBed	intrn	171150	171247	.	-	.	Parent=CGI_10007659;
	scaffold452	TRF	Tandem_Repeat	171150	171247	54	+	.	.
scaffold452	subtractBed	intrn	172787	172844	.	-	.	Parent=CGI_10007659;
	scaffold452	TRF	Tandem_Repeat	172787	172844	72	+	.	.
scaffold452	subtractBed	intrn	172788	172844	.	-	.	Parent=CGI_10007659;
	scaffold452	TRF	Tandem_Repeat	172788	172844	82	+	.	.
scaffold453	subtractBed	intrn	17922	17983	.	+	.	Parent=CGI_10015038;
	scaffold453	TRF	Tandem_Repeat	17922	17983	60	+	.	.
scaffold453	subtractBed	intrn	17923	17993	.	+	.	Parent=CGI_10015038;
	scaffold453	TRF	Tandem_Repeat	17923	17993	73	+	.	.
scaffold453	subtractBed	intrn	17923	17987	.	+	.	Parent=CGI_10015038;
	scaffold453	TRF	Tandem_Repeat	17923	17987	80	+	.	.
scaffold453	subtractBed	intrn	142785	142883	.	+	.	Parent=CGI_10015041;
	scaffold453	WUBlastX	LTR_Gypsy	142785	142883	34	+	.	.
scaffold453	subtractBed	intrn	142800	142886	.	+	.	Parent=CGI_10015041;
	scaffold453	WUBlastX	LTR_Gypsy	142800	142886	41	+	.	.
scaffold453	subtractBed	intrn	142758	142886	.	+	.	Parent=CGI_10015041;
	scaffold453	WUBlastX	LTR_Gypsy	142758	142886	25	+	.	.
scaffold453	subtractBed	intrn	142426	142716	.	+	.	Parent=CGI_10015041;
	scaffold453	WUBlastX	LTR_Gypsy	142426	142716	94	+	.	.
scaffold453	subtractBed	intrn	145520	145572	.	+	.	Parent=CGI_10015041;
	scaffold453	TRF	Tandem_Repeat	145520	145572	106	+	.	.
scaffold453	subtractBed	intrn	151158	151189	.	+	.	Parent=CGI_10015041;
	scaffold453	TRF	Tandem_Repeat	151158	151189	64	+	.	.
scaffold453	subtractBed	intrn	152616	152680	.	+	.	Parent=CGI_10015041;
	scaffold453	TRF	Tandem_Repeat	152616	152680	103	+	.	.
scaffold453	subtractBed	intrn	155645	155689	.	+	.	Parent=CGI_10015041;
	scaffold453	TRF	Tandem_Repeat	155645	155689	90	+	.	.
scaffold453	subtractBed	intrn	301458	301637	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	301458	301637	35	+	.	.
scaffold453	subtractBed	intrn	302372	302482	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	302372	302482	59	+	.	.
scaffold453	subtractBed	intrn	302351	302491	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	302351	302491	44	+	.	.
scaffold453	subtractBed	intrn	302801	303007	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	302801	303007	30	-	.	.
scaffold453	subtractBed	intrn	302798	302929	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	302798	302929	79	-	.	.
scaffold453	subtractBed	intrn	303045	303176	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Kolobok	303045	303176	78	-	.	.
scaffold453	subtractBed	intrn	304792	304971	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	304792	304971	39	+	.	.
scaffold453	subtractBed	intrn	306518	306619	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	306518	306619	21	+	.	.
scaffold453	subtractBed	intrn	306704	306784	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	306704	306784	21	+	.	.
scaffold453	subtractBed	intrn	305139	306395	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	305139	306395	1134	+	.	.
scaffold453	subtractBed	intrn	305022	305639	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	305022	305639	87	+	.	.
scaffold453	subtractBed	intrn	305886	306542	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	305886	306542	171	+	.	.
scaffold453	subtractBed	intrn	304146	304346	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	304146	304346	190	+	.	.
scaffold453	subtractBed	intrn	304342	304941	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LTR_Gypsy	304342	304941	286	+	.	.
scaffold453	subtractBed	intrn	310814	310972	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Harbinger	310814	310972	94	-	.	.
scaffold453	subtractBed	intrn	310250	310681	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Harbinger	310250	310681	180	-	.	.
scaffold453	subtractBed	intrn	310838	310996	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	DNA_Harbinger	310838	310996	49	-	.	.
scaffold453	subtractBed	intrn	311298	311347	.	+	.	Parent=CGI_10015048;
	scaffold453	TRF	Tandem_Repeat	311298	311347	100	+	.	.
scaffold453	subtractBed	intrn	314406	314495	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_CR1-L2	314406	314495	25	-	.	.
scaffold453	subtractBed	intrn	315121	315180	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_CR1-L2	315121	315180	51	-	.	.
scaffold453	subtractBed	intrn	315130	315255	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_CR1-L2	315130	315255	45	-	.	.
scaffold453	subtractBed	intrn	314738	315115	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_CR1-L2	314738	315115	70	-	.	.
scaffold453	subtractBed	intrn	314406	314564	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_L2	314406	314564	24	-	.	.
scaffold453	subtractBed	intrn	314666	315157	.	+	.	Parent=CGI_10015048;
	scaffold453	WUBlastX	LINE_L2	314666	315157	55	-	.	.
scaffold453	subtractBed	intrn	358128	358226	.	+	.	Parent=CGI_10015050;
	scaffold453	WUBlastX	DNA_PiggyBac	358128	358226	35	+	.	.
scaffold453	subtractBed	intrn	357528	357620	.	+	.	Parent=CGI_10015050;
	scaffold453	WUBlastX	DNA_PiggyBac	357528	357620	37	+	.	.
scaffold453	subtractBed	intrn	358086	358226	.	+	.	Parent=CGI_10015050;
	scaffold453	WUBlastX	DNA_PiggyBac	358086	358226	31	+	.	.
scaffold453	subtractBed	intrn	417604	417997	.	-	.	Parent=CGI_10015051;
	scaffold453	TRF	Tandem_Repeat	417577	417997	788	+	.	.
scaffold454	subtractBed	intrn	101425	101597	.	-	.	Parent=CGI_10011629;
	scaffold454	TRF	Tandem_Repeat	101425	101597	123	+	.	.
scaffold454	subtractBed	intrn	101401	101607	.	-	.	Parent=CGI_10011629;
	scaffold454	TRF	Tandem_Repeat	101401	101607	110	+	.	.
scaffold454	subtractBed	intrn	101619	101793	.	-	.	Parent=CGI_10011629;
	scaffold454	TRF	Tandem_Repeat	101619	101793	79	+	.	.
scaffold454	subtractBed	intrn	98723	99685	.	-	.	Parent=CGI_10011629;
	scaffold454	WUBlastX	LINE_L2	98723	99685	515	-	.	.
scaffold454	subtractBed	intrn	99589	100530	.	-	.	Parent=CGI_10011629;
	scaffold454	WUBlastX	LINE_L2	99589	100530	301	-	.	.
scaffold454	subtractBed	intrn	99589	100722	.	-	.	Parent=CGI_10011629;
	scaffold454	WUBlastX	LINE_CR1-L2	99589	100722	162	-	.	.
scaffold454	subtractBed	intrn	98073	98726	.	-	.	Parent=CGI_10011629;
	scaffold454	WUBlastX	LINE_L2	98073	98726	501	-	.	.
scaffold454	subtractBed	intrn	97785	98726	.	-	.	Parent=CGI_10011629;
	scaffold454	WUBlastX	LINE_L2	97785	98726	230	-	.	.
scaffold454	subtractBed	intrn	112193	112245	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	112193	112245	106	+	.	.
scaffold454	subtractBed	intrn	126760	126797	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	126760	126797	60	+	.	.
scaffold454	subtractBed	intrn	127843	128202	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	127843	128202	486	+	.	.
scaffold454	subtractBed	intrn	127843	128202	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	127843	128202	486	+	.	.
scaffold454	subtractBed	intrn	144919	145036	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	144919	145036	96	+	.	.
scaffold454	subtractBed	intrn	150238	150262	.	-	.	Parent=CGI_10011630;
	scaffold454	TRF	Tandem_Repeat	150238	150262	50	+	.	.
scaffold454	subtractBed	intrn	180733	180787	.	-	.	Parent=CGI_10011632;
	scaffold454	TRF	Tandem_Repeat	180733	180787	57	+	.	.
scaffold454	subtractBed	intrn	180731	180787	.	-	.	Parent=CGI_10011632;
	scaffold454	TRF	Tandem_Repeat	180731	180787	82	+	.	.
scaffold454	subtractBed	intrn	212420	212466	.	+	.	Parent=CGI_10011633;
	scaffold454	TRF	Tandem_Repeat	212420	212466	94	+	.	.
scaffold454	subtractBed	intrn	254943	255650	.	-	.	Parent=CGI_10011637;
	scaffold454	TRF	Tandem_Repeat	254943	255650	1030	+	.	.
scaffold456	subtractBed	intrn	68419	68461	.	-	.	Parent=CGI_10006860;
	scaffold456	TRF	Tandem_Repeat	68419	68461	86	+	.	.
scaffold456	subtractBed	intrn	68541	68576	.	-	.	Parent=CGI_10006860;
	scaffold456	TRF	Tandem_Repeat	68541	68576	72	+	.	.
scaffold456	subtractBed	intrn	120079	120355	.	+	.	Parent=CGI_10006863;
	scaffold456	TRF	Tandem_Repeat	120079	120355	266	+	.	.
scaffold456	subtractBed	intrn	120087	120337	.	+	.	Parent=CGI_10006863;
	scaffold456	TRF	Tandem_Repeat	120087	120337	333	+	.	.
scaffold456	subtractBed	intrn	120079	120392	.	+	.	Parent=CGI_10006863;
	scaffold456	TRF	Tandem_Repeat	120079	120392	301	+	.	.
scaffold456	subtractBed	intrn	121932	122026	.	+	.	Parent=CGI_10006863;
	scaffold456	TRF	Tandem_Repeat	121932	122026	59	+	.	.
scaffold456	subtractBed	intrn	127715	127740	.	+	.	Parent=CGI_10006863;
	scaffold456	TRF	Tandem_Repeat	127715	127740	52	+	.	.
scaffold456	subtractBed	intrn	141504	141767	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141504	141767	105	+	.	.
scaffold456	subtractBed	intrn	140570	140617	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	140570	140617	24	+	.	.
scaffold456	subtractBed	intrn	141968	142741	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141968	142741	220	+	.	.
scaffold456	subtractBed	intrn	141585	141992	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141585	141992	152	+	.	.
scaffold456	subtractBed	intrn	141567	141818	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141567	141818	207	+	.	.
scaffold456	subtractBed	intrn	141573	141899	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141573	141899	174	+	.	.
scaffold456	subtractBed	intrn	138959	139087	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Ngaro	138959	139087	38	+	.	.
scaffold456	subtractBed	intrn	141402	141776	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	141402	141776	73	+	.	.
scaffold456	subtractBed	intrn	137942	138583	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Ngaro	137942	138583	187	+	.	.
scaffold456	subtractBed	intrn	142031	142684	.	+	.	Parent=CGI_10006863;
	scaffold456	WUBlastX	LTR_Gypsy	142031	142684	605	+	.	.
scaffold457	subtractBed	intrn	41837	41878	.	+	.	Parent=CGI_10014527;
	scaffold457	TRF	Tandem_Repeat	41837	41878	84	+	.	.
scaffold457	subtractBed	intrn	50391	50430	.	+	.	Parent=CGI_10014527;
	scaffold457	TRF	Tandem_Repeat	50391	50430	80	+	.	.
scaffold457	subtractBed	intrn	51790	51833	.	+	.	Parent=CGI_10014527;
	scaffold457	TRF	Tandem_Repeat	51790	51833	79	+	.	.
scaffold457	subtractBed	intrn	81562	81599	.	+	.	Parent=CGI_10014528;
	scaffold457	TRF	Tandem_Repeat	81562	81599	51	+	.	.
scaffold457	subtractBed	intrn	81557	81602	.	+	.	Parent=CGI_10014528;
	scaffold457	TRF	Tandem_Repeat	81557	81602	51	+	.	.
scaffold457	subtractBed	intrn	86951	87006	.	+	.	Parent=CGI_10014528;
	scaffold457	TRF	Tandem_Repeat	86951	87006	112	+	.	.
scaffold457	subtractBed	intrn	115092	115493	.	-	.	Parent=CGI_10014529;
	scaffold457	TRF	Tandem_Repeat	115092	115493	142	+	.	.
scaffold457	subtractBed	intrn	114832	115519	.	-	.	Parent=CGI_10014529;
	scaffold457	TRF	Tandem_Repeat	114832	115519	532	+	.	.
scaffold457	subtractBed	intrn	115087	115527	.	-	.	Parent=CGI_10014529;
	scaffold457	TRF	Tandem_Repeat	115087	115527	86	+	.	.
scaffold457	subtractBed	intrn	116502	116526	.	-	.	Parent=CGI_10014529;
	scaffold457	TRF	Tandem_Repeat	116502	116526	50	+	.	.
scaffold457	subtractBed	intrn	178375	178765	.	-	.	Parent=CGI_10014532;
	scaffold457	TRF	Tandem_Repeat	178375	178776	441	+	.	.
scaffold457	subtractBed	intrn	180415	180452	.	-	.	Parent=CGI_10014532;
	scaffold457	TRF	Tandem_Repeat	180415	180452	67	+	.	.
scaffold457	subtractBed	intrn	180415	180453	.	-	.	Parent=CGI_10014532;
	scaffold457	TRF	Tandem_Repeat	180415	180453	51	+	.	.
scaffold457	subtractBed	intrn	214750	214986	.	-	.	Parent=CGI_10014534;
	scaffold457	WUBlastX	DNA_TcMar-Marin	214750	214986	65	-	.	.
scaffold457	subtractBed	intrn	214510	214668	.	-	.	Parent=CGI_10014534;
	scaffold457	WUBlastX	DNA_TcMar-Marin	214510	214668	29	-	.	.
scaffold457	subtractBed	intrn	218687	218740	.	-	.	Parent=CGI_10014534;
	scaffold457	TRF	Tandem_Repeat	218687	218740	108	+	.	.
scaffold457	subtractBed	intrn	216851	217981	.	-	.	Parent=CGI_10014534;
	scaffold457	WUBlastX	LINE_L1-Tx1	216851	217981	194	+	.	.
scaffold457	subtractBed	intrn	216666	216851	.	-	.	Parent=CGI_10014534;
	scaffold457	WUBlastX	LINE_L1-Tx1	216666	216851	52	+	.	.
scaffold457	subtractBed	intrn	239160	239356	.	-	.	Parent=CGI_10014536;
	scaffold457	TRF	Tandem_Repeat	239160	239356	249	+	.	.
scaffold457	subtractBed	intrn	239159	239355	.	-	.	Parent=CGI_10014536;
	scaffold457	TRF	Tandem_Repeat	239159	239355	245	+	.	.
scaffold457	subtractBed	intrn	269930	269988	.	+	.	Parent=CGI_10014537;
	scaffold457	TRF	Tandem_Repeat	269930	269988	50	+	.	.
scaffold457	subtractBed	intrn	273554	273627	.	+	.	Parent=CGI_10014537;
	scaffold457	TRF	Tandem_Repeat	273554	273627	130	+	.	.
scaffold457	subtractBed	intrn	289842	290403	.	-	.	Parent=CGI_10014539;
	scaffold457	TRF	Tandem_Repeat	289842	290403	979	+	.	.
scaffold457	subtractBed	intrn	297177	297206	.	-	.	Parent=CGI_10014539;
	scaffold457	TRF	Tandem_Repeat	297177	297206	60	+	.	.
scaffold457	subtractBed	intrn	297773	297812	.	-	.	Parent=CGI_10014539;
	scaffold457	TRF	Tandem_Repeat	297773	297812	80	+	.	.
scaffold457	subtractBed	intrn	331080	331472	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	331080	331472	678	+	.	.
scaffold457	subtractBed	intrn	336123	336217	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	336123	336217	79	+	.	.
scaffold457	subtractBed	intrn	344833	345286	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	344833	345286	456	+	.	.
scaffold457	subtractBed	intrn	344833	345306	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	344833	345306	456	+	.	.
scaffold457	subtractBed	intrn	345514	345668	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	345514	345668	134	+	.	.
scaffold457	subtractBed	intrn	353073	353126	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	353073	353126	108	+	.	.
scaffold457	subtractBed	intrn	354494	354868	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	354494	354868	678	+	.	.
scaffold457	subtractBed	intrn	357779	357923	.	-	.	Parent=CGI_10014541;
	scaffold457	TRF	Tandem_Repeat	357779	357923	175	+	.	.
scaffold457	subtractBed	intrn	367192	367245	.	-	.	Parent=CGI_10014542;
	scaffold457	TRF	Tandem_Repeat	367192	367245	90	+	.	.
scaffold457	subtractBed	intrn	366505	366903	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE-BovB	366505	366903	144	+	.	.
scaffold457	subtractBed	intrn	366893	367021	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE-BovB	366893	367021	82	+	.	.
scaffold457	subtractBed	intrn	365430	366185	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE-BovB	365430	366185	404	+	.	.
scaffold457	subtractBed	intrn	366622	366912	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE-BovB	366622	366912	232	+	.	.
scaffold457	subtractBed	intrn	365314	366107	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE	365217	366107	48	+	.	.
scaffold457	subtractBed	intrn	365718	366536	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_RTE-BovB	365718	366536	133	+	.	.
scaffold457	subtractBed	intrn	366914	367111	.	-	.	Parent=CGI_10014542;
	scaffold457	WUBlastX	LINE_I	366914	367111	26	+	.	.
scaffold458	subtractBed	intrn	2571	2792	.	+	.	Parent=CGI_10013583;
	scaffold458	TRF	Tandem_Repeat	2571	2792	154	+	.	.
scaffold458	subtractBed	intrn	2572	2792	.	+	.	Parent=CGI_10013583;
	scaffold458	TRF	Tandem_Repeat	2572	2792	399	+	.	.
scaffold458	subtractBed	intrn	7454	7500	.	+	.	Parent=CGI_10013583;
	scaffold458	TRF	Tandem_Repeat	7454	7500	69	+	.	.
scaffold458	subtractBed	intrn	109061	109086	.	+	.	Parent=CGI_10013589;
	scaffold458	TRF	Tandem_Repeat	109061	109086	52	+	.	.
scaffold458	subtractBed	intrn	109116	109174	.	+	.	Parent=CGI_10013589;
	scaffold458	TRF	Tandem_Repeat	109116	109174	118	+	.	.
scaffold458	subtractBed	intrn	172323	172369	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	171860	172369	155	+	.	.
scaffold458	subtractBed	intrn	172638	172910	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	172638	172910	63	+	.	.
scaffold458	subtractBed	intrn	172323	172504	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	171737	172504	107	+	.	.
scaffold458	subtractBed	intrn	172728	172922	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	172728	172922	83	+	.	.
scaffold458	subtractBed	intrn	172907	174247	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	172907	174247	851	+	.	.
scaffold458	subtractBed	intrn	172323	172342	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	171914	172342	191	+	.	.
scaffold458	subtractBed	intrn	174196	175155	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	174196	175155	431	+	.	.
scaffold458	subtractBed	intrn	176393	176665	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	176393	176665	63	+	.	.
scaffold458	subtractBed	intrn	176483	176677	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	176483	176677	83	+	.	.
scaffold458	subtractBed	intrn	176662	178002	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	176662	178002	851	+	.	.
scaffold458	subtractBed	intrn	175954	176097	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	175954	176097	92	+	.	.
scaffold458	subtractBed	intrn	175999	176259	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	175999	176259	35	+	.	.
scaffold458	subtractBed	intrn	177951	178910	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	177951	178910	431	+	.	.
scaffold458	subtractBed	intrn	175957	176124	.	+	.	Parent=CGI_10013591;
	scaffold458	WUBlastX	LTR_Ngaro	175957	176124	57	+	.	.
scaffold458	subtractBed	intrn	203897	203923	.	-	.	Parent=CGI_10013592;
	scaffold458	TRF	Tandem_Repeat	203897	203923	54	+	.	.
scaffold458	subtractBed	intrn	209714	209740	.	-	.	Parent=CGI_10013592;
	scaffold458	TRF	Tandem_Repeat	209714	209740	54	+	.	.
scaffold458	subtractBed	intrn	248723	248829	.	-	.	Parent=CGI_10013594;
	scaffold458	TRF	Tandem_Repeat	248723	248829	189	+	.	.
scaffold458	subtractBed	intrn	248723	248829	.	+	.	Parent=CGI_10013595;
	scaffold458	TRF	Tandem_Repeat	248723	248829	189	+	.	.
scaffold458	subtractBed	intrn	271153	271197	.	-	.	Parent=CGI_10013596;
	scaffold458	TRF	Tandem_Repeat	271153	271197	90	+	.	.
scaffold459	subtractBed	intrn	15271	15315	.	-	.	Parent=CGI_10018163;
	scaffold459	TRF	Tandem_Repeat	15271	15315	90	+	.	.
scaffold459	subtractBed	intrn	22894	23619	.	+	.	Parent=CGI_10018164;
	scaffold459	WUBlastX	LINE_RTE-X	22894	23619	209	+	.	.
scaffold459	subtractBed	intrn	33721	33746	.	+	.	Parent=CGI_10018164;
	scaffold459	TRF	Tandem_Repeat	33721	33746	52	+	.	.
scaffold459	subtractBed	intrn	22894	23619	.	-	.	Parent=CGI_10018165;
	scaffold459	WUBlastX	LINE_RTE-X	22894	23619	209	+	.	.
scaffold459	subtractBed	intrn	45250	45289	.	-	.	Parent=CGI_10018166;
	scaffold459	TRF	Tandem_Repeat	45250	45289	62	+	.	.
scaffold459	subtractBed	intrn	50311	50402	.	+	.	Parent=CGI_10018167;
	scaffold459	TRF	Tandem_Repeat	50311	50402	103	+	.	.
scaffold459	subtractBed	intrn	51159	51431	.	+	.	Parent=CGI_10018167;
	scaffold459	WUBlastX	DNA_Merlin	51159	51431	128	-	.	.
scaffold459	subtractBed	intrn	52351	52653	.	+	.	Parent=CGI_10018167;
	scaffold459	WUBlastX	DNA_Merlin	52351	52653	189	-	.	.
scaffold459	subtractBed	intrn	52354	52896	.	+	.	Parent=CGI_10018167;
	scaffold459	WUBlastX	DNA_Merlin	52354	52896	117	-	.	.
scaffold459	subtractBed	intrn	51150	51503	.	+	.	Parent=CGI_10018167;
	scaffold459	WUBlastX	DNA_Merlin	51150	51503	98	-	.	.
scaffold459	subtractBed	intrn	68296	68324	.	+	.	Parent=CGI_10018167;
	scaffold459	TRF	Tandem_Repeat	68296	68324	58	+	.	.
scaffold459	subtractBed	intrn	82188	82471	.	+	.	Parent=CGI_10018167;
	scaffold459	TRF	Tandem_Repeat	82188	82471	509	+	.	.
scaffold459	subtractBed	intrn	92274	92876	.	+	.	Parent=CGI_10018169;
	scaffold459	WUBlastX	LINE_RTE-X	92274	92876	164	+	.	.
scaffold459	subtractBed	intrn	92836	93024	.	+	.	Parent=CGI_10018169;
	scaffold459	WUBlastX	LINE_RTE-X	92836	93024	27	+	.	.
scaffold459	subtractBed	intrn	92878	92985	.	+	.	Parent=CGI_10018169;
	scaffold459	WUBlastX	LINE_RTE-X	92878	92985	38	+	.	.
scaffold459	subtractBed	intrn	92244	92348	.	+	.	Parent=CGI_10018169;
	scaffold459	WUBlastX	LINE_RTE-X	92244	92348	24	+	.	.
scaffold459	subtractBed	intrn	95933	96052	.	+	.	Parent=CGI_10018169;
	scaffold459	TRF	Tandem_Repeat	95933	96052	96	+	.	.
scaffold459	subtractBed	intrn	98986	99099	.	+	.	Parent=CGI_10018169;
	scaffold459	TRF	Tandem_Repeat	98986	99099	86	+	.	.
scaffold459	subtractBed	intrn	131821	132531	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	131821	132531	29	-	.	.
scaffold459	subtractBed	intrn	131821	132150	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	131821	132150	52	-	.	.
scaffold459	subtractBed	intrn	131821	132090	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	131821	132090	74	-	.	.
scaffold459	subtractBed	intrn	132424	132555	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	132424	132555	29	-	.	.
scaffold459	subtractBed	intrn	132198	132302	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	132198	132302	35	-	.	.
scaffold459	subtractBed	intrn	132427	132531	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	132427	132531	36	-	.	.
scaffold459	subtractBed	intrn	137523	137852	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	137523	137852	60	-	.	.
scaffold459	subtractBed	intrn	137484	137654	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	137484	137654	33	-	.	.
scaffold459	subtractBed	intrn	137912	138256	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	137912	138256	40	-	.	.
scaffold459	subtractBed	intrn	137384	137455	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	137384	137455	31	-	.	.
scaffold459	subtractBed	intrn	137523	137792	.	-	.	Parent=CGI_10018170;
	scaffold459	WUBlastX	DNA_TcMar-Marin	137523	137792	84	-	.	.
scaffold459	subtractBed	intrn	147668	147721	.	-	.	Parent=CGI_10018171;
	scaffold459	TRF	Tandem_Repeat	147668	147721	108	+	.	.
scaffold459	subtractBed	intrn	158582	158630	.	-	.	Parent=CGI_10018171;
	scaffold459	TRF	Tandem_Repeat	158582	158630	98	+	.	.
scaffold459	subtractBed	intrn	157606	157785	.	-	.	Parent=CGI_10018171;
	scaffold459	WUBlastX	DNA_TcMar-Marin	157606	157785	47	-	.	.
scaffold459	subtractBed	intrn	159507	159531	.	-	.	Parent=CGI_10018171;
	scaffold459	TRF	Tandem_Repeat	159507	159531	50	+	.	.
scaffold459	subtractBed	intrn	177857	178100	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	177857	178100	130	+	.	.
scaffold459	subtractBed	intrn	177901	178173	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	177901	178173	199	+	.	.
scaffold459	subtractBed	intrn	177905	178147	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	177905	178147	391	+	.	.
scaffold459	subtractBed	intrn	178332	178468	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	178332	178468	60	+	.	.
scaffold459	subtractBed	intrn	178333	178463	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	178333	178463	84	+	.	.
scaffold459	subtractBed	intrn	178376	178481	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	178376	178481	77	+	.	.
scaffold459	subtractBed	intrn	181299	181346	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	181299	181346	96	+	.	.
scaffold459	subtractBed	intrn	217527	217570	.	+	.	Parent=CGI_10018172;
	scaffold459	TRF	Tandem_Repeat	217527	217570	79	+	.	.
scaffold459	subtractBed	intrn	251152	251198	.	-	.	Parent=CGI_10018174;
	scaffold459	TRF	Tandem_Repeat	251152	251198	76	+	.	.
scaffold459	subtractBed	intrn	290693	290763	.	-	.	Parent=CGI_10018176;
	scaffold459	TRF	Tandem_Repeat	290693	290763	117	+	.	.
scaffold459	subtractBed	intrn	450353	450403	.	-	.	Parent=CGI_10018185;
	scaffold459	TRF	Tandem_Repeat	450353	450403	52	+	.	.
scaffold459	subtractBed	intrn	455153	455190	.	-	.	Parent=CGI_10018185;
	scaffold459	TRF	Tandem_Repeat	455153	455190	60	+	.	.
scaffold459	subtractBed	intrn	459752	460141	.	-	.	Parent=CGI_10018185;
	scaffold459	WUBlastX	LINE_Penelope	459752	460141	53	-	.	.
scaffold459	subtractBed	intrn	462709	463251	.	-	.	Parent=CGI_10018185;
	scaffold459	WUBlastX	DNA_TcMar-Marin	462709	463251	96	+	.	.
scaffold459	subtractBed	intrn	494755	494814	.	-	.	Parent=CGI_10018187;
	scaffold459	TRF	Tandem_Repeat	494755	494814	120	+	.	.
scaffold459	subtractBed	intrn	510258	510308	.	-	.	Parent=CGI_10018187;
	scaffold459	TRF	Tandem_Repeat	510258	510308	102	+	.	.
scaffold459	subtractBed	intrn	510819	510885	.	-	.	Parent=CGI_10018187;
	scaffold459	TRF	Tandem_Repeat	510819	510885	71	+	.	.
scaffold459	subtractBed	intrn	510819	510885	.	-	.	Parent=CGI_10018187;
	scaffold459	TRF	Tandem_Repeat	510819	510885	80	+	.	.
scaffold461	subtractBed	intrn	42075	42131	.	-	.	Parent=CGI_10020100;
	scaffold461	TRF	Tandem_Repeat	42075	42131	51	+	.	.
scaffold461	subtractBed	intrn	42233	42277	.	-	.	Parent=CGI_10020100;
	scaffold461	TRF	Tandem_Repeat	42233	42277	63	+	.	.
scaffold461	subtractBed	intrn	183122	183242	.	+	.	Parent=CGI_10020106;
	scaffold461	TRF	Tandem_Repeat	183122	183242	110	+	.	.
scaffold461	subtractBed	intrn	184274	184407	.	+	.	Parent=CGI_10020106;
	scaffold461	TRF	Tandem_Repeat	184274	184407	128	+	.	.
scaffold461	subtractBed	intrn	189189	189240	.	+	.	Parent=CGI_10020106;
	scaffold461	TRF	Tandem_Repeat	189189	189240	104	+	.	.
scaffold461	subtractBed	intrn	266219	267142	.	-	.	Parent=CGI_10020107;
	scaffold461	WUBlastX	DNA_TcMar-Tc1	266219	267142	387	-	.	.
scaffold461	subtractBed	intrn	288339	289103	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	DNA_IS4EU	288339	289103	101	-	.	.
scaffold461	subtractBed	intrn	293085	293603	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	293085	293603	65	-	.	.
scaffold461	subtractBed	intrn	293771	293842	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	293771	293842	20	-	.	.
scaffold461	subtractBed	intrn	292980	293318	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	292980	293318	119	-	.	.
scaffold461	subtractBed	intrn	292954	293055	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	292954	293055	27	-	.	.
scaffold461	subtractBed	intrn	293064	293426	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	293064	293426	109	-	.	.
scaffold461	subtractBed	intrn	293061	293318	.	-	.	Parent=CGI_10020108;
	scaffold461	WUBlastX	LINE_L2	293061	293318	156	-	.	.
scaffold461	subtractBed	intrn	307242	307281	.	-	.	Parent=CGI_10020109;
	scaffold461	TRF	Tandem_Repeat	307242	307281	73	+	.	.
scaffold461	subtractBed	intrn	308229	308372	.	-	.	Parent=CGI_10020109;
	scaffold461	WUBlastX	DNA_Harbinger	308229	308372	72	-	.	.
scaffold461	subtractBed	intrn	309046	309222	.	-	.	Parent=CGI_10020109;
	scaffold461	WUBlastX	DNA_Harbinger	309046	309222	27	-	.	.
scaffold461	subtractBed	intrn	308211	308345	.	-	.	Parent=CGI_10020109;
	scaffold461	WUBlastX	DNA_Harbinger	308211	308345	72	-	.	.
scaffold461	subtractBed	intrn	309022	309186	.	-	.	Parent=CGI_10020109;
	scaffold461	WUBlastX	DNA_Harbinger	309022	309186	57	-	.	.
scaffold461	subtractBed	intrn	324296	325357	.	-	.	Parent=CGI_10020110;
	scaffold461	WUBlastX	LINE_Penelope	324296	325357	195	+	.	.
scaffold461	subtractBed	intrn	495514	495538	.	+	.	Parent=CGI_10020115;
	scaffold461	TRF	Tandem_Repeat	495514	495538	50	+	.	.
scaffold461	subtractBed	intrn	503516	503672	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	DNA_IS4EU	503394	503672	28	+	.	.
scaffold461	subtractBed	intrn	503741	503860	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	DNA_IS4EU	503741	503860	44	+	.	.
scaffold461	subtractBed	intrn	506029	506211	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LINE_RTE-X	506029	506211	58	+	.	.
scaffold461	subtractBed	intrn	505588	505731	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LINE_RTE-X	505588	505731	58	+	.	.
scaffold461	subtractBed	intrn	506053	506301	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LINE_RTE-X	506053	506301	28	+	.	.
scaffold461	subtractBed	intrn	505612	505803	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LINE_RTE-X	505612	505803	63	+	.	.
scaffold461	subtractBed	intrn	508443	508961	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LTR_Gypsy-Cigr	508443	508961	158	+	.	.
scaffold461	subtractBed	intrn	507230	508087	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LTR_Gypsy	507230	508087	43	+	.	.
scaffold461	subtractBed	intrn	507452	508414	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LTR_Gypsy	507452	508414	171	+	.	.
scaffold461	subtractBed	intrn	507530	508102	.	+	.	Parent=CGI_10020117;
	scaffold461	WUBlastX	LTR_Gypsy-Cigr	507530	508102	199	+	.	.
scaffold461	subtractBed	intrn	512997	513047	.	+	.	Parent=CGI_10020118;
	scaffold461	TRF	Tandem_Repeat	512997	513047	93	+	.	.
scaffold461	subtractBed	intrn	513451	513609	.	+	.	Parent=CGI_10020118;
	scaffold461	TRF	Tandem_Repeat	513451	513609	300	+	.	.
scaffold461	subtractBed	intrn	513727	513807	.	+	.	Parent=CGI_10020118;
	scaffold461	TRF	Tandem_Repeat	513727	513807	135	+	.	.
scaffold461	subtractBed	intrn	515285	515593	.	+	.	Parent=CGI_10020118;
	scaffold461	WUBlastX	LTR_Pao	515285	515593	135	+	.	.
scaffold461	subtractBed	intrn	515704	516180	.	+	.	Parent=CGI_10020118;
	scaffold461	WUBlastX	LTR_Ngaro	515704	516180	104	+	.	.
scaffold461	subtractBed	intrn	515153	515593	.	+	.	Parent=CGI_10020118;
	scaffold461	WUBlastX	LTR_Pao	515153	515593	116	+	.	.
scaffold461	subtractBed	intrn	515204	515695	.	+	.	Parent=CGI_10020118;
	scaffold461	WUBlastX	LTR_Pao	515204	515695	112	+	.	.
scaffold461	subtractBed	intrn	564604	564659	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	564604	564659	58	+	.	.
scaffold461	subtractBed	intrn	564602	564654	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	564602	564654	52	+	.	.
scaffold461	subtractBed	intrn	571427	571484	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	571427	571484	109	+	.	.
scaffold461	subtractBed	intrn	576190	576246	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	576190	576246	53	+	.	.
scaffold461	subtractBed	intrn	576198	576263	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	576198	576263	71	+	.	.
scaffold461	subtractBed	intrn	578586	578649	.	+	.	Parent=CGI_10020120;
	scaffold461	TRF	Tandem_Repeat	578586	578649	128	+	.	.
scaffold462	subtractBed	intrn	6244	6323	.	+	.	Parent=CGI_10000714;
	scaffold462	TRF	Tandem_Repeat	6244	6323	160	+	.	.
scaffold462	subtractBed	intrn	4411	5175	.	+	.	Parent=CGI_10000714;
	scaffold462	WUBlastX	LINE_Penelope	4411	5175	109	+	.	.
scaffold463	subtractBed	intrn	40468	40499	.	-	.	Parent=CGI_10004288;
	scaffold463	TRF	Tandem_Repeat	40468	40499	64	+	.	.
scaffold463	subtractBed	intrn	41985	42025	.	-	.	Parent=CGI_10004288;
	scaffold463	TRF	Tandem_Repeat	41985	42025	82	+	.	.
scaffold463	subtractBed	intrn	43760	43788	.	-	.	Parent=CGI_10004288;
	scaffold463	TRF	Tandem_Repeat	43760	43788	58	+	.	.
scaffold463	subtractBed	intrn	43225	43698	.	-	.	Parent=CGI_10004288;
	scaffold463	WUBlastX	LINE_L2	43225	43698	422	-	.	.
scaffold463	subtractBed	intrn	53021	53059	.	+	.	Parent=CGI_10004289;
	scaffold463	TRF	Tandem_Repeat	53021	53059	78	+	.	.
scaffold463	subtractBed	intrn	53114	53145	.	+	.	Parent=CGI_10004289;
	scaffold463	TRF	Tandem_Repeat	53114	53145	64	+	.	.
scaffold463	subtractBed	intrn	78768	78794	.	-	.	Parent=CGI_10004291;
	scaffold463	TRF	Tandem_Repeat	78768	78794	54	+	.	.
scaffold463	subtractBed	intrn	79554	80295	.	-	.	Parent=CGI_10004291;
	scaffold463	TRF	Tandem_Repeat	79554	80295	735	+	.	.
scaffold465	subtractBed	intrn	10553	10614	.	-	.	Parent=CGI_10003823;
	scaffold465	TRF	Tandem_Repeat	10553	10614	106	+	.	.
scaffold465	subtractBed	intrn	11539	11575	.	-	.	Parent=CGI_10003823;
	scaffold465	TRF	Tandem_Repeat	11539	11575	74	+	.	.
scaffold465	subtractBed	intrn	19080	19116	.	-	.	Parent=CGI_10003823;
	scaffold465	TRF	Tandem_Repeat	19080	19116	74	+	.	.
scaffold465	subtractBed	intrn	20537	20576	.	-	.	Parent=CGI_10003823;
	scaffold465	TRF	Tandem_Repeat	20537	20576	80	+	.	.
scaffold465	subtractBed	intrn	22830	23055	.	-	.	Parent=CGI_10003823;
	scaffold465	TRF	Tandem_Repeat	22830	23055	407	+	.	.
scaffold465	subtractBed	intrn	71605	71636	.	-	.	Parent=CGI_10003826;
	scaffold465	TRF	Tandem_Repeat	71605	71636	64	+	.	.
scaffold469	subtractBed	intrn	69927	69980	.	-	.	Parent=CGI_10024665;
	scaffold469	TRF	Tandem_Repeat	69927	69980	101	+	.	.
scaffold469	subtractBed	intrn	99651	99970	.	-	.	Parent=CGI_10024667;
	scaffold469	TRF	Tandem_Repeat	99651	99970	225	+	.	.
scaffold469	subtractBed	intrn	99645	99970	.	-	.	Parent=CGI_10024667;
	scaffold469	TRF	Tandem_Repeat	99645	99970	331	+	.	.
scaffold469	subtractBed	intrn	99651	99960	.	-	.	Parent=CGI_10024667;
	scaffold469	TRF	Tandem_Repeat	99651	99960	294	+	.	.
scaffold469	subtractBed	intrn	104928	105785	.	-	.	Parent=CGI_10024668;
	scaffold469	TRF	Tandem_Repeat	104928	105785	1177	+	.	.
scaffold469	subtractBed	intrn	105792	105827	.	-	.	Parent=CGI_10024668;
	scaffold469	TRF	Tandem_Repeat	105792	105827	54	+	.	.
scaffold469	subtractBed	intrn	105796	105826	.	-	.	Parent=CGI_10024668;
	scaffold469	TRF	Tandem_Repeat	105796	105826	53	+	.	.
scaffold469	subtractBed	intrn	151307	152074	.	-	.	Parent=CGI_10024669;
	scaffold469	WUBlastX	LTR_Pao	151307	152074	694	-	.	.
scaffold469	subtractBed	intrn	152073	153203	.	-	.	Parent=CGI_10024669;
	scaffold469	WUBlastX	LTR_Pao	152073	153203	813	-	.	.
scaffold469	subtractBed	intrn	409473	409645	.	-	.	Parent=CGI_10024677;
	scaffold469	TRF	Tandem_Repeat	409473	409645	161	+	.	.
scaffold469	subtractBed	intrn	415907	415942	.	+	.	Parent=CGI_10024679;
	scaffold469	TRF	Tandem_Repeat	415907	415942	72	+	.	.
scaffold469	subtractBed	intrn	602182	602297	.	+	.	Parent=CGI_10024688;
	scaffold469	WUBlastX	DNA_P	602085	602297	28	+	.	.
scaffold469	subtractBed	intrn	613325	613363	.	+	.	Parent=CGI_10024688;
	scaffold469	TRF	Tandem_Repeat	613325	613363	78	+	.	.
scaffold469	subtractBed	intrn	602182	602297	.	-	.	Parent=CGI_10024689;
	scaffold469	WUBlastX	DNA_P	602085	602297	28	+	.	.
scaffold469	subtractBed	intrn	621095	621472	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	621095	621472	317	-	.	.
scaffold469	subtractBed	intrn	621566	622261	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	621566	622261	193	-	.	.
scaffold469	subtractBed	intrn	621467	621871	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	621467	621871	134	-	.	.
scaffold469	subtractBed	intrn	621539	622150	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	621539	622150	345	-	.	.
scaffold469	subtractBed	intrn	620632	621081	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	620632	621081	85	-	.	.
scaffold469	subtractBed	intrn	622239	622523	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	622239	622523	148	-	.	.
scaffold469	subtractBed	intrn	624167	624739	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	624167	624739	456	+	.	.
scaffold469	subtractBed	intrn	622979	623332	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	622979	623332	144	+	.	.
scaffold469	subtractBed	intrn	623338	623568	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	623338	623568	126	+	.	.
scaffold469	subtractBed	intrn	623577	624167	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	623577	624167	124	+	.	.
scaffold469	subtractBed	intrn	623550	624077	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	623550	624077	372	+	.	.
scaffold469	subtractBed	intrn	623045	623326	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	623045	623326	154	+	.	.
scaffold469	subtractBed	intrn	624712	625515	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	624712	625515	609	+	.	.
scaffold469	subtractBed	intrn	622545	622973	.	+	.	Parent=CGI_10024690;
	scaffold469	WUBlastX	LTR_Pao	622545	622973	352	+	.	.
scaffold469	subtractBed	intrn	631744	631791	.	+	.	Parent=CGI_10024690;
	scaffold469	TRF	Tandem_Repeat	631744	631791	96	+	.	.
scaffold469	subtractBed	intrn	634624	634670	.	+	.	Parent=CGI_10024690;
	scaffold469	TRF	Tandem_Repeat	634624	634670	53	+	.	.
scaffold469	subtractBed	intrn	663886	663911	.	+	.	Parent=CGI_10024691;
	scaffold469	TRF	Tandem_Repeat	663886	663911	52	+	.	.
scaffold469	subtractBed	intrn	670219	670244	.	+	.	Parent=CGI_10024691;
	scaffold469	TRF	Tandem_Repeat	670219	670244	52	+	.	.
scaffold469	subtractBed	intrn	684570	684635	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	684570	684635	98	+	.	.
scaffold469	subtractBed	intrn	685515	685593	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	685515	685593	56	+	.	.
scaffold469	subtractBed	intrn	685620	685680	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	685620	685680	59	+	.	.
scaffold469	subtractBed	intrn	686987	688026	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	686987	688026	1552	+	.	.
scaffold469	subtractBed	intrn	692239	693073	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	692239	693073	1546	+	.	.
scaffold469	subtractBed	intrn	693078	693123	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	693078	693123	74	+	.	.
scaffold469	subtractBed	intrn	693078	693136	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	693078	693136	64	+	.	.
scaffold469	subtractBed	intrn	695818	696643	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	695818	696643	1157	+	.	.
scaffold469	subtractBed	intrn	695312	695599	.	-	.	Parent=CGI_10024692;
	scaffold469	WUBlastX	LINE_L1-Tx1	695312	695599	44	+	.	.
scaffold469	subtractBed	intrn	695282	695497	.	-	.	Parent=CGI_10024692;
	scaffold469	WUBlastX	LINE_L1-Tx1	695282	695497	59	+	.	.
scaffold469	subtractBed	intrn	700006	700057	.	-	.	Parent=CGI_10024692;
	scaffold469	TRF	Tandem_Repeat	700006	700057	104	+	.	.
scaffold469	subtractBed	intrn	825812	825843	.	-	.	Parent=CGI_10024698;
	scaffold469	TRF	Tandem_Repeat	825812	825843	64	+	.	.
scaffold469	subtractBed	intrn	827262	827612	.	-	.	Parent=CGI_10024698;
	scaffold469	WUBlastX	LINE_L2	827262	827612	30	-	.	.
scaffold469	subtractBed	intrn	827361	827750	.	-	.	Parent=CGI_10024698;
	scaffold469	WUBlastX	LINE_CR1-L2	827361	827750	35	-	.	.
scaffold469	subtractBed	intrn	831903	831939	.	-	.	Parent=CGI_10024698;
	scaffold469	TRF	Tandem_Repeat	831903	831939	58	+	.	.
scaffold469	subtractBed	intrn	841847	841880	.	-	.	Parent=CGI_10024698;
	scaffold469	TRF	Tandem_Repeat	841847	841880	68	+	.	.
scaffold469	subtractBed	intrn	843233	843308	.	-	.	Parent=CGI_10024698;
	scaffold469	TRF	Tandem_Repeat	843233	843308	80	+	.	.
scaffold469	subtractBed	intrn	927871	928071	.	+	.	Parent=CGI_10024703;
	scaffold469	WUBlastX	LINE_CR1-L2	927871	928071	23	+	.	.
scaffold469	subtractBed	intrn	928046	928261	.	+	.	Parent=CGI_10024703;
	scaffold469	WUBlastX	LINE_CR1-L2	928046	928261	44	+	.	.
scaffold469	subtractBed	intrn	936864	937904	.	+	.	Parent=CGI_10024703;
	scaffold469	WUBlastX	LINE_RTE-X	936864	937904	452	-	.	.
scaffold469	subtractBed	intrn	937614	937961	.	+	.	Parent=CGI_10024703;
	scaffold469	WUBlastX	LINE_RTE-X	937614	937961	81	-	.	.
scaffold469	subtractBed	intrn	940775	941043	.	+	.	Parent=CGI_10024703;
	scaffold469	TRF	Tandem_Repeat	940775	941043	283	+	.	.
scaffold47	subtractBed	intrn	21932	22925	.	-	.	Parent=CGI_10002504;
	scaffold47	TRF	Tandem_Repeat	21932	22925	1460	+	.	.
scaffold47	subtractBed	intrn	24964	25263	.	-	.	Parent=CGI_10002504;
	scaffold47	WUBlastX	DNA_TcMar-Tc2	24964	25263	76	-	.	.
scaffold47	subtractBed	intrn	25905	26228	.	-	.	Parent=CGI_10002504;
	scaffold47	WUBlastX	DNA_TcMar-Fot1	25905	26228	92	-	.	.
scaffold47	subtractBed	intrn	25956	26684	.	-	.	Parent=CGI_10002504;
	scaffold47	WUBlastX	DNA_TcMar-Tc2	25956	26684	158	-	.	.
scaffold471	subtractBed	intrn	35855	36681	.	-	.	Parent=CGI_10026997;
	scaffold471	TRF	Tandem_Repeat	35855	36681	801	+	.	.
scaffold471	subtractBed	intrn	46922	47121	.	-	.	Parent=CGI_10026998;
	scaffold471	TRF	Tandem_Repeat	46922	47121	171	+	.	.
scaffold471	subtractBed	intrn	46922	47121	.	-	.	Parent=CGI_10026998;
	scaffold471	TRF	Tandem_Repeat	46922	47121	173	+	.	.
scaffold471	subtractBed	intrn	54382	54436	.	-	.	Parent=CGI_10026998;
	scaffold471	TRF	Tandem_Repeat	54382	54436	110	+	.	.
scaffold471	subtractBed	intrn	54382	54436	.	+	.	Parent=CGI_10026999;
	scaffold471	TRF	Tandem_Repeat	54382	54436	110	+	.	.
scaffold471	subtractBed	intrn	58425	58465	.	+	.	Parent=CGI_10026999;
	scaffold471	TRF	Tandem_Repeat	58425	58465	82	+	.	.
scaffold471	subtractBed	intrn	67862	67862	.	+	.	Parent=CGI_10026999;
	scaffold471	WUBlastX	LTR_ERV1	67862	68068	26	+	.	.
scaffold471	subtractBed	intrn	88924	89076	.	+	.	Parent=CGI_10027000;
	scaffold471	WUBlastX	LINE_RTE-BovB	88924	89076	56	-	.	.
scaffold471	subtractBed	intrn	91185	91681	.	+	.	Parent=CGI_10027000;
	scaffold471	TRF	Tandem_Repeat	91185	91681	852	+	.	.
scaffold471	subtractBed	intrn	153842	154014	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	153842	154014	103	+	.	.
scaffold471	subtractBed	intrn	158163	158208	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	158163	158208	92	+	.	.
scaffold471	subtractBed	intrn	158328	158354	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	158328	158354	54	+	.	.
scaffold471	subtractBed	intrn	158422	158460	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	158422	158460	78	+	.	.
scaffold471	subtractBed	intrn	160238	160264	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	160238	160264	54	+	.	.
scaffold471	subtractBed	intrn	161579	161672	.	-	.	Parent=CGI_10027006;
	scaffold471	TRF	Tandem_Repeat	161579	161672	147	+	.	.
scaffold471	subtractBed	intrn	193689	193719	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	193689	193719	62	+	.	.
scaffold471	subtractBed	intrn	194779	194848	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	194779	194848	140	+	.	.
scaffold471	subtractBed	intrn	197136	197242	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	197136	197242	108	+	.	.
scaffold471	subtractBed	intrn	200677	200722	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	200677	200722	85	+	.	.
scaffold471	subtractBed	intrn	199505	199708	.	+	.	Parent=CGI_10027007;
	scaffold471	WUBlastX	LINE_CR1-L2	199505	199708	50	+	.	.
scaffold471	subtractBed	intrn	199672	199830	.	+	.	Parent=CGI_10027007;
	scaffold471	WUBlastX	LINE_CR1-L2	199672	199830	26	+	.	.
scaffold471	subtractBed	intrn	205685	205825	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	205685	205825	160	+	.	.
scaffold471	subtractBed	intrn	205685	205825	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	205685	205825	160	+	.	.
scaffold471	subtractBed	intrn	205685	205825	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	205685	205825	160	+	.	.
scaffold471	subtractBed	intrn	208346	208398	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	208346	208398	106	+	.	.
scaffold471	subtractBed	intrn	210016	210645	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	210016	210645	946	+	.	.
scaffold471	subtractBed	intrn	214278	214334	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	214278	214334	114	+	.	.
scaffold471	subtractBed	intrn	226582	226626	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	226582	226626	90	+	.	.
scaffold471	subtractBed	intrn	226800	226870	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	226800	226870	142	+	.	.
scaffold471	subtractBed	intrn	228818	228863	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	228818	228863	65	+	.	.
scaffold471	subtractBed	intrn	230956	230989	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	230956	230989	68	+	.	.
scaffold471	subtractBed	intrn	234039	234347	.	+	.	Parent=CGI_10027007;
	scaffold471	TRF	Tandem_Repeat	234039	234347	545	+	.	.
scaffold471	subtractBed	intrn	423636	424148	.	+	.	Parent=CGI_10027011;
	scaffold471	TRF	Tandem_Repeat	423636	424148	305	+	.	.
scaffold471	subtractBed	intrn	423982	424130	.	+	.	Parent=CGI_10027011;
	scaffold471	TRF	Tandem_Repeat	423982	424130	127	+	.	.
scaffold471	subtractBed	intrn	423636	424148	.	-	.	Parent=CGI_10027012;
	scaffold471	TRF	Tandem_Repeat	423636	424148	305	+	.	.
scaffold471	subtractBed	intrn	423982	424130	.	-	.	Parent=CGI_10027012;
	scaffold471	TRF	Tandem_Repeat	423982	424130	127	+	.	.
scaffold471	subtractBed	intrn	427099	428104	.	-	.	Parent=CGI_10027012;
	scaffold471	TRF	Tandem_Repeat	427099	428104	1104	+	.	.
scaffold471	subtractBed	intrn	442915	443651	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	442915	443651	909	+	.	.
scaffold471	subtractBed	intrn	443242	443651	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	443242	443651	398	+	.	.
scaffold471	subtractBed	intrn	476660	476697	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	476660	476697	60	+	.	.
scaffold471	subtractBed	intrn	476835	477714	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	476835	477714	1253	+	.	.
scaffold471	subtractBed	intrn	478658	478804	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	478658	478804	73	+	.	.
scaffold471	subtractBed	intrn	478720	478868	.	-	.	Parent=CGI_10027013;
	scaffold471	TRF	Tandem_Repeat	478720	478868	90	+	.	.
scaffold471	subtractBed	intrn	476660	476697	.	+	.	Parent=CGI_10027015;
	scaffold471	TRF	Tandem_Repeat	476660	476697	60	+	.	.
scaffold471	subtractBed	intrn	476835	477714	.	+	.	Parent=CGI_10027015;
	scaffold471	TRF	Tandem_Repeat	476835	477714	1253	+	.	.
scaffold471	subtractBed	intrn	478658	478804	.	+	.	Parent=CGI_10027015;
	scaffold471	TRF	Tandem_Repeat	478658	478804	73	+	.	.
scaffold471	subtractBed	intrn	478720	478868	.	+	.	Parent=CGI_10027015;
	scaffold471	TRF	Tandem_Repeat	478720	478868	90	+	.	.
scaffold471	subtractBed	intrn	494330	494379	.	-	.	Parent=CGI_10027017;
	scaffold471	TRF	Tandem_Repeat	494330	494379	91	+	.	.
scaffold471	subtractBed	intrn	499644	499783	.	+	.	Parent=CGI_10027018;
	scaffold471	TRF	Tandem_Repeat	499644	499783	77	+	.	.
scaffold471	subtractBed	intrn	840011	840104	.	-	.	Parent=CGI_10027021;
	scaffold471	TRF	Tandem_Repeat	840011	840104	72	+	.	.
scaffold471	subtractBed	intrn	840016	840106	.	-	.	Parent=CGI_10027021;
	scaffold471	TRF	Tandem_Repeat	840016	840106	55	+	.	.
scaffold471	subtractBed	intrn	853037	853066	.	+	.	Parent=CGI_10027022;
	scaffold471	TRF	Tandem_Repeat	853037	853066	51	+	.	.
scaffold471	subtractBed	intrn	910964	911415	.	-	.	Parent=CGI_10027028;
	scaffold471	WUBlastX	LINE_L2	910964	911542	22	-	.	.
scaffold471	subtractBed	intrn	914301	914365	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	914301	914365	55	+	.	.
scaffold471	subtractBed	intrn	914303	914365	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	914303	914365	64	+	.	.
scaffold471	subtractBed	intrn	917326	917358	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	917326	917358	66	+	.	.
scaffold471	subtractBed	intrn	926919	926948	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	926919	926948	51	+	.	.
scaffold471	subtractBed	intrn	942406	942596	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	942406	942596	213	+	.	.
scaffold471	subtractBed	intrn	944509	945496	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	944509	945496	1057	+	.	.
scaffold471	subtractBed	intrn	944492	945496	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	944492	945496	1298	+	.	.
scaffold471	subtractBed	intrn	944492	945492	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	944492	945492	1360	+	.	.
scaffold471	subtractBed	intrn	944509	945492	.	-	.	Parent=CGI_10027028;
	scaffold471	TRF	Tandem_Repeat	944509	945492	1276	+	.	.
scaffold471	subtractBed	intrn	972197	972240	.	-	.	Parent=CGI_10027031;
	scaffold471	TRF	Tandem_Repeat	972197	972240	88	+	.	.
scaffold471	subtractBed	intrn	973746	973805	.	-	.	Parent=CGI_10027031;
	scaffold471	TRF	Tandem_Repeat	973746	973805	86	+	.	.
scaffold471	subtractBed	intrn	975553	975614	.	-	.	Parent=CGI_10027031;
	scaffold471	TRF	Tandem_Repeat	975553	975614	124	+	.	.
scaffold471	subtractBed	intrn	972197	972240	.	+	.	Parent=CGI_10027032;
	scaffold471	TRF	Tandem_Repeat	972197	972240	88	+	.	.
scaffold471	subtractBed	intrn	973746	973805	.	+	.	Parent=CGI_10027032;
	scaffold471	TRF	Tandem_Repeat	973746	973805	86	+	.	.
scaffold471	subtractBed	intrn	975553	975614	.	+	.	Parent=CGI_10027032;
	scaffold471	TRF	Tandem_Repeat	975553	975614	124	+	.	.
scaffold471	subtractBed	intrn	981311	981344	.	+	.	Parent=CGI_10027032;
	scaffold471	TRF	Tandem_Repeat	981311	981344	68	+	.	.
scaffold471	subtractBed	intrn	982977	983001	.	+	.	Parent=CGI_10027032;
	scaffold471	TRF	Tandem_Repeat	982977	983001	50	+	.	.
scaffold471	subtractBed	intrn	1122261	1122297	.	+	.	Parent=CGI_10027035;
	scaffold471	TRF	Tandem_Repeat	1122261	1122297	74	+	.	.
scaffold471	subtractBed	intrn	1172762	1173108	.	-	.	Parent=CGI_10027036;
	scaffold471	TRF	Tandem_Repeat	1172762	1173108	490	+	.	.
scaffold471	subtractBed	intrn	1229012	1229992	.	-	.	Parent=CGI_10027038;
	scaffold471	WUBlastX	DNA_MuDR	1229012	1229992	43	-	.	.
scaffold471	subtractBed	intrn	1229012	1230214	.	-	.	Parent=CGI_10027038;
	scaffold471	WUBlastX	DNA_MuDR	1229012	1230214	29	-	.	.
scaffold471	subtractBed	intrn	1229420	1229791	.	-	.	Parent=CGI_10027038;
	scaffold471	WUBlastX	DNA_MuDR	1229420	1229791	73	-	.	.
scaffold471	subtractBed	intrn	1229420	1229671	.	-	.	Parent=CGI_10027038;
	scaffold471	WUBlastX	DNA_MuDR	1229420	1229671	83	-	.	.
scaffold471	subtractBed	intrn	1234712	1234764	.	-	.	Parent=CGI_10027038;
	scaffold471	TRF	Tandem_Repeat	1234712	1234764	97	+	.	.
scaffold471	subtractBed	intrn	1247361	1247512	.	-	.	Parent=CGI_10027039;
	scaffold471	TRF	Tandem_Repeat	1247361	1247512	121	+	.	.
scaffold471	subtractBed	intrn	1247821	1247888	.	-	.	Parent=CGI_10027039;
	scaffold471	TRF	Tandem_Repeat	1247821	1247888	109	+	.	.
scaffold471	subtractBed	intrn	1262753	1262788	.	-	.	Parent=CGI_10027039;
	scaffold471	TRF	Tandem_Repeat	1262753	1262788	63	+	.	.
scaffold471	subtractBed	intrn	1262729	1262787	.	-	.	Parent=CGI_10027039;
	scaffold471	TRF	Tandem_Repeat	1262729	1262787	73	+	.	.
scaffold472	subtractBed	intrn	91507	91799	.	-	.	Parent=CGI_10018499;
	scaffold472	TRF	Tandem_Repeat	91507	91799	188	+	.	.
scaffold472	subtractBed	intrn	91509	91776	.	-	.	Parent=CGI_10018499;
	scaffold472	TRF	Tandem_Repeat	91509	91776	256	+	.	.
scaffold472	subtractBed	intrn	96836	96863	.	-	.	Parent=CGI_10018499;
	scaffold472	TRF	Tandem_Repeat	96836	96863	56	+	.	.
scaffold472	subtractBed	intrn	103421	103482	.	-	.	Parent=CGI_10018500;
	scaffold472	TRF	Tandem_Repeat	103421	103482	124	+	.	.
scaffold472	subtractBed	intrn	143748	143793	.	-	.	Parent=CGI_10018507;
	scaffold472	TRF	Tandem_Repeat	143748	143793	92	+	.	.
scaffold472	subtractBed	intrn	145568	145607	.	-	.	Parent=CGI_10018507;
	scaffold472	TRF	Tandem_Repeat	145568	145607	80	+	.	.
scaffold472	subtractBed	intrn	171530	171563	.	+	.	Parent=CGI_10018508;
	scaffold472	TRF	Tandem_Repeat	171530	171563	59	+	.	.
scaffold472	subtractBed	intrn	177326	177390	.	+	.	Parent=CGI_10018508;
	scaffold472	TRF	Tandem_Repeat	177326	177390	130	+	.	.
scaffold472	subtractBed	intrn	190796	190842	.	+	.	Parent=CGI_10018508;
	scaffold472	TRF	Tandem_Repeat	190796	190842	85	+	.	.
scaffold472	subtractBed	intrn	212039	212391	.	+	.	Parent=CGI_10018510;
	scaffold472	TRF	Tandem_Repeat	212006	212391	523	+	.	.
scaffold472	subtractBed	intrn	230505	230543	.	+	.	Parent=CGI_10018511;
	scaffold472	TRF	Tandem_Repeat	230505	230543	69	+	.	.
scaffold472	subtractBed	intrn	235356	235432	.	+	.	Parent=CGI_10018511;
	scaffold472	TRF	Tandem_Repeat	235356	235432	154	+	.	.
scaffold472	subtractBed	intrn	336997	337057	.	+	.	Parent=CGI_10018516;
	scaffold472	TRF	Tandem_Repeat	336997	337057	122	+	.	.
scaffold472	subtractBed	intrn	380009	380510	.	+	.	Parent=CGI_10018518;
	scaffold472	TRF	Tandem_Repeat	380009	380510	461	+	.	.
scaffold472	subtractBed	intrn	380102	380523	.	+	.	Parent=CGI_10018518;
	scaffold472	TRF	Tandem_Repeat	380102	380523	553	+	.	.
scaffold472	subtractBed	intrn	380102	380510	.	+	.	Parent=CGI_10018518;
	scaffold472	TRF	Tandem_Repeat	380102	380510	517	+	.	.
scaffold472	subtractBed	intrn	382211	382326	.	+	.	Parent=CGI_10018518;
	scaffold472	TRF	Tandem_Repeat	382211	382326	196	+	.	.
scaffold472	subtractBed	intrn	390886	391272	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	390886	391272	238	+	.	.
scaffold472	subtractBed	intrn	390954	391163	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	390954	391163	114	+	.	.
scaffold472	subtractBed	intrn	390952	391272	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	390952	391272	363	+	.	.
scaffold472	subtractBed	intrn	395504	395958	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	395504	395958	529	+	.	.
scaffold472	subtractBed	intrn	395529	395958	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	395529	395958	430	+	.	.
scaffold472	subtractBed	intrn	404550	404604	.	-	.	Parent=CGI_10018519;
	scaffold472	TRF	Tandem_Repeat	404550	404604	65	+	.	.
scaffold472	subtractBed	intrn	510171	510214	.	+	.	Parent=CGI_10018523;
	scaffold472	TRF	Tandem_Repeat	510171	510214	88	+	.	.
scaffold473	subtractBed	intrn	5384	5535	.	+	.	Parent=CGI_10010578;
	scaffold473	TRF	Tandem_Repeat	5384	5535	154	+	.	.
scaffold473	subtractBed	intrn	7817	7875	.	+	.	Parent=CGI_10010578;
	scaffold473	TRF	Tandem_Repeat	7817	7875	82	+	.	.
scaffold473	subtractBed	intrn	81599	81829	.	-	.	Parent=CGI_10010580;
	scaffold473	TRF	Tandem_Repeat	81599	81829	419	+	.	.
scaffold473	subtractBed	intrn	101700	101749	.	-	.	Parent=CGI_10010581;
	scaffold473	TRF	Tandem_Repeat	101700	101749	100	+	.	.
scaffold473	subtractBed	intrn	116024	116069	.	+	.	Parent=CGI_10010582;
	scaffold473	TRF	Tandem_Repeat	116024	116069	83	+	.	.
scaffold473	subtractBed	intrn	213263	213289	.	+	.	Parent=CGI_10010589;
	scaffold473	TRF	Tandem_Repeat	213263	213289	54	+	.	.
scaffold474	subtractBed	intrn	41849	42388	.	+	.	Parent=CGI_10007591;
	scaffold474	WUBlastX	LTR_Pao	41849	42388	249	-	.	.
scaffold474	subtractBed	intrn	41714	42400	.	+	.	Parent=CGI_10007591;
	scaffold474	WUBlastX	LTR_Pao	41714	42400	237	-	.	.
scaffold474	subtractBed	intrn	111648	111840	.	+	.	Parent=CGI_10007593;
	scaffold474	TRF	Tandem_Repeat	111648	111840	167	+	.	.
scaffold474	subtractBed	intrn	111987	112261	.	+	.	Parent=CGI_10007593;
	scaffold474	TRF	Tandem_Repeat	111987	112261	185	+	.	.
scaffold474	subtractBed	intrn	111956	112290	.	+	.	Parent=CGI_10007593;
	scaffold474	TRF	Tandem_Repeat	111956	112290	235	+	.	.
scaffold474	subtractBed	intrn	119389	120131	.	+	.	Parent=CGI_10007593;
	scaffold474	TRF	Tandem_Repeat	119373	120131	1222	+	.	.
scaffold474	subtractBed	intrn	177252	177930	.	-	.	Parent=CGI_10007598;
	scaffold474	TRF	Tandem_Repeat	177252	177930	729	+	.	.
scaffold474	subtractBed	intrn	175833	176375	.	-	.	Parent=CGI_10007598;
	scaffold474	WUBlastX	LINE_RTE-BovB	175833	176375	81	+	.	.
scaffold474	subtractBed	intrn	176800	176931	.	-	.	Parent=CGI_10007598;
	scaffold474	WUBlastX	LINE_RTE-BovB	176800	176931	56	+	.	.
scaffold474	subtractBed	intrn	176392	176556	.	-	.	Parent=CGI_10007598;
	scaffold474	WUBlastX	LINE_RTE-BovB	176392	176556	95	+	.	.
scaffold474	subtractBed	intrn	176621	176896	.	-	.	Parent=CGI_10007598;
	scaffold474	WUBlastX	LINE_RTE-BovB	176621	176896	20	+	.	.
scaffold477	subtractBed	intrn	18711	19046	.	+	.	Parent=CGI_10012307;
	scaffold477	TRF	Tandem_Repeat	18711	19060	470	+	.	.
scaffold477	subtractBed	intrn	33375	33410	.	+	.	Parent=CGI_10012308;
	scaffold477	TRF	Tandem_Repeat	33375	33410	54	+	.	.
scaffold477	subtractBed	intrn	33414	33466	.	+	.	Parent=CGI_10012308;
	scaffold477	TRF	Tandem_Repeat	33414	33466	81	+	.	.
scaffold477	subtractBed	intrn	50767	50979	.	+	.	Parent=CGI_10012309;
	scaffold477	WUBlastX	LINE_RTE-X	50767	50979	103	-	.	.
scaffold477	subtractBed	intrn	50770	51054	.	+	.	Parent=CGI_10012309;
	scaffold477	WUBlastX	LINE_RTE-X	50770	51054	71	-	.	.
scaffold477	subtractBed	intrn	57792	57946	.	+	.	Parent=CGI_10012309;
	scaffold477	TRF	Tandem_Repeat	57792	57946	111	+	.	.
scaffold477	subtractBed	intrn	57771	57946	.	+	.	Parent=CGI_10012309;
	scaffold477	TRF	Tandem_Repeat	57771	57946	230	+	.	.
scaffold477	subtractBed	intrn	94475	94611	.	-	.	Parent=CGI_10012310;
	scaffold477	TRF	Tandem_Repeat	94475	94611	173	+	.	.
scaffold477	subtractBed	intrn	100390	100436	.	+	.	Parent=CGI_10012311;
	scaffold477	TRF	Tandem_Repeat	100390	100436	94	+	.	.
scaffold477	subtractBed	intrn	172207	172500	.	-	.	Parent=CGI_10012313;
	scaffold477	TRF	Tandem_Repeat	172207	172500	378	+	.	.
scaffold477	subtractBed	intrn	172207	172497	.	-	.	Parent=CGI_10012313;
	scaffold477	TRF	Tandem_Repeat	172207	172497	311	+	.	.
scaffold477	subtractBed	intrn	172207	172500	.	-	.	Parent=CGI_10012313;
	scaffold477	TRF	Tandem_Repeat	172207	172500	320	+	.	.
scaffold477	subtractBed	intrn	198029	198242	.	-	.	Parent=CGI_10012317;
	scaffold477	TRF	Tandem_Repeat	198029	198242	338	+	.	.
scaffold477	subtractBed	intrn	198029	198283	.	-	.	Parent=CGI_10012317;
	scaffold477	TRF	Tandem_Repeat	198029	198283	336	+	.	.
scaffold477	subtractBed	intrn	202658	202701	.	-	.	Parent=CGI_10012317;
	scaffold477	TRF	Tandem_Repeat	202658	202701	70	+	.	.
scaffold477	subtractBed	intrn	203384	203437	.	-	.	Parent=CGI_10012317;
	scaffold477	TRF	Tandem_Repeat	203384	203437	108	+	.	.
scaffold477	subtractBed	intrn	210488	210549	.	-	.	Parent=CGI_10012317;
	scaffold477	TRF	Tandem_Repeat	210488	210549	67	+	.	.
scaffold477	subtractBed	intrn	231922	232045	.	-	.	Parent=CGI_10012319;
	scaffold477	TRF	Tandem_Repeat	231922	232045	89	+	.	.
scaffold477	subtractBed	intrn	234137	234175	.	-	.	Parent=CGI_10012319;
	scaffold477	TRF	Tandem_Repeat	234137	234175	78	+	.	.
scaffold477	subtractBed	intrn	234649	235221	.	-	.	Parent=CGI_10012319;
	scaffold477	TRF	Tandem_Repeat	234649	235221	966	+	.	.
scaffold477	subtractBed	intrn	240786	240855	.	-	.	Parent=CGI_10012319;
	scaffold477	TRF	Tandem_Repeat	240786	240855	108	+	.	.
scaffold479	subtractBed	intrn	17249	17278	.	-	.	Parent=CGI_10015678;
	scaffold479	TRF	Tandem_Repeat	17249	17278	60	+	.	.
scaffold479	subtractBed	intrn	21974	22014	.	-	.	Parent=CGI_10015678;
	scaffold479	TRF	Tandem_Repeat	21974	22014	82	+	.	.
scaffold479	subtractBed	intrn	36385	36645	.	-	.	Parent=CGI_10015678;
	scaffold479	TRF	Tandem_Repeat	36385	36645	274	+	.	.
scaffold479	subtractBed	intrn	36363	36593	.	-	.	Parent=CGI_10015678;
	scaffold479	TRF	Tandem_Repeat	36363	36593	178	+	.	.
scaffold479	subtractBed	intrn	38821	39212	.	-	.	Parent=CGI_10015678;
	scaffold479	TRF	Tandem_Repeat	38821	39212	335	+	.	.
scaffold479	subtractBed	intrn	83403	83693	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_DIRS	83403	83693	55	+	.	.
scaffold479	subtractBed	intrn	83740	84354	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	83740	84354	61	+	.	.
scaffold479	subtractBed	intrn	83385	83747	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_DIRS	83385	83747	30	+	.	.
scaffold479	subtractBed	intrn	89652	89699	.	+	.	Parent=CGI_10015682;
	scaffold479	TRF	Tandem_Repeat	89652	89699	96	+	.	.
scaffold479	subtractBed	intrn	85972	86403	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	85972	86403	126	+	.	.
scaffold479	subtractBed	intrn	87441	88322	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	87441	88322	213	+	.	.
scaffold479	subtractBed	intrn	86158	86448	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	86158	86448	176	+	.	.
scaffold479	subtractBed	intrn	86451	86630	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	86451	86630	66	+	.	.
scaffold479	subtractBed	intrn	86630	87454	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	86630	87454	278	+	.	.
scaffold479	subtractBed	intrn	87495	88199	.	+	.	Parent=CGI_10015682;
	scaffold479	WUBlastX	LTR_Ngaro	87495	88199	224	+	.	.
scaffold479	subtractBed	intrn	94074	94864	.	+	.	Parent=CGI_10015682;
	scaffold479	TRF	Tandem_Repeat	94074	94864	1197	+	.	.
scaffold479	subtractBed	intrn	96709	96857	.	+	.	Parent=CGI_10015682;
	scaffold479	TRF	Tandem_Repeat	96709	96857	95	+	.	.
scaffold479	subtractBed	intrn	94074	94864	.	-	.	Parent=CGI_10015683;
	scaffold479	TRF	Tandem_Repeat	94074	94864	1197	+	.	.
scaffold479	subtractBed	intrn	96709	96857	.	-	.	Parent=CGI_10015683;
	scaffold479	TRF	Tandem_Repeat	96709	96857	95	+	.	.
scaffold479	subtractBed	intrn	102223	102517	.	-	.	Parent=CGI_10015684;
	scaffold479	TRF	Tandem_Repeat	102223	102517	310	+	.	.
scaffold479	subtractBed	intrn	112853	112884	.	+	.	Parent=CGI_10015685;
	scaffold479	TRF	Tandem_Repeat	112853	112884	64	+	.	.
scaffold479	subtractBed	intrn	114101	114292	.	+	.	Parent=CGI_10015685;
	scaffold479	TRF	Tandem_Repeat	114101	114292	244	+	.	.
scaffold479	subtractBed	intrn	138690	138997	.	+	.	Parent=CGI_10015687;
	scaffold479	TRF	Tandem_Repeat	138690	138997	382	+	.	.
scaffold479	subtractBed	intrn	138730	138998	.	+	.	Parent=CGI_10015687;
	scaffold479	TRF	Tandem_Repeat	138730	138998	384	+	.	.
scaffold479	subtractBed	intrn	141674	141703	.	+	.	Parent=CGI_10015687;
	scaffold479	TRF	Tandem_Repeat	141674	141703	60	+	.	.
scaffold479	subtractBed	intrn	149815	149926	.	-	.	Parent=CGI_10015691;
	scaffold479	TRF	Tandem_Repeat	149815	149926	197	+	.	.
scaffold479	subtractBed	intrn	153921	153978	.	-	.	Parent=CGI_10015691;
	scaffold479	TRF	Tandem_Repeat	153921	153978	116	+	.	.
scaffold479	subtractBed	intrn	271511	271644	.	+	.	Parent=CGI_10015697;
	scaffold479	TRF	Tandem_Repeat	271511	271644	92	+	.	.
scaffold479	subtractBed	intrn	308598	308720	.	-	.	Parent=CGI_10015700;
	scaffold479	WUBlastX	LINE_RTE-X	308598	308720	49	+	.	.
scaffold479	subtractBed	intrn	308595	308759	.	-	.	Parent=CGI_10015700;
	scaffold479	WUBlastX	LINE_RTE-X	308595	308759	47	+	.	.
scaffold479	subtractBed	intrn	308230	308451	.	-	.	Parent=CGI_10015700;
	scaffold479	WUBlastX	LINE_RTE-X	308230	308451	23	+	.	.
scaffold479	subtractBed	intrn	424337	424792	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	424337	424792	119	+	.	.
scaffold479	subtractBed	intrn	421893	422201	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	421893	422201	115	+	.	.
scaffold479	subtractBed	intrn	421476	422201	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	421476	422201	97	+	.	.
scaffold479	subtractBed	intrn	424762	425037	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	424762	425037	94	+	.	.
scaffold479	subtractBed	intrn	423994	424134	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	423994	424134	49	+	.	.
scaffold479	subtractBed	intrn	422522	423994	.	+	.	Parent=CGI_10015702;
	scaffold479	WUBlastX	LTR_Ngaro	422522	423994	629	+	.	.
scaffold48	subtractBed	intrn	29956	30036	.	-	.	Parent=CGI_10023879;
	scaffold48	TRF	Tandem_Repeat	29956	30036	153	+	.	.
scaffold48	subtractBed	intrn	30710	30885	.	-	.	Parent=CGI_10023879;
	scaffold48	TRF	Tandem_Repeat	30710	30885	153	+	.	.
scaffold48	subtractBed	intrn	31562	31620	.	-	.	Parent=CGI_10023879;
	scaffold48	TRF	Tandem_Repeat	31562	31620	55	+	.	.
scaffold48	subtractBed	intrn	31573	31619	.	-	.	Parent=CGI_10023879;
	scaffold48	TRF	Tandem_Repeat	31573	31619	67	+	.	.
scaffold48	subtractBed	intrn	31569	31620	.	-	.	Parent=CGI_10023879;
	scaffold48	TRF	Tandem_Repeat	31569	31620	86	+	.	.
scaffold48	subtractBed	intrn	90264	90314	.	+	.	Parent=CGI_10023882;
	scaffold48	TRF	Tandem_Repeat	90264	90314	75	+	.	.
scaffold48	subtractBed	intrn	90264	90310	.	+	.	Parent=CGI_10023882;
	scaffold48	TRF	Tandem_Repeat	90264	90310	58	+	.	.
scaffold48	subtractBed	intrn	107780	107840	.	+	.	Parent=CGI_10023883;
	scaffold48	TRF	Tandem_Repeat	107780	107840	122	+	.	.
scaffold48	subtractBed	intrn	126154	126405	.	+	.	Parent=CGI_10023885;
	scaffold48	WUBlastX	DNA_TcMar-Marin	126154	126405	168	+	.	.
scaffold48	subtractBed	intrn	131436	132336	.	+	.	Parent=CGI_10023885;
	scaffold48	TRF	Tandem_Repeat	131436	132336	1529	+	.	.
scaffold48	subtractBed	intrn	139943	140296	.	+	.	Parent=CGI_10023885;
	scaffold48	WUBlastX	LINE_L1-Tx1	139943	140296	85	-	.	.
scaffold48	subtractBed	intrn	208038	209197	.	+	.	Parent=CGI_10023886;
	scaffold48	TRF	Tandem_Repeat	208038	209197	1241	+	.	.
scaffold48	subtractBed	intrn	269689	269848	.	-	.	Parent=CGI_10023891;
	scaffold48	WUBlastX	DNA_hAT-Tip100	269636	269848	67	-	.	.
scaffold48	subtractBed	intrn	275086	275248	.	-	.	Parent=CGI_10023891;
	scaffold48	TRF	Tandem_Repeat	275086	275265	263	+	.	.
scaffold48	subtractBed	intrn	278046	278115	.	-	.	Parent=CGI_10023891;
	scaffold48	TRF	Tandem_Repeat	278046	278115	74	+	.	.
scaffold48	subtractBed	intrn	278045	278115	.	-	.	Parent=CGI_10023891;
	scaffold48	TRF	Tandem_Repeat	278045	278115	72	+	.	.
scaffold48	subtractBed	intrn	297572	297626	.	+	.	Parent=CGI_10023893;
	scaffold48	TRF	Tandem_Repeat	297572	297626	110	+	.	.
scaffold48	subtractBed	intrn	304955	305085	.	+	.	Parent=CGI_10023893;
	scaffold48	TRF	Tandem_Repeat	304955	305085	182	+	.	.
scaffold48	subtractBed	intrn	308670	308732	.	+	.	Parent=CGI_10023893;
	scaffold48	TRF	Tandem_Repeat	308670	308732	90	+	.	.
scaffold48	subtractBed	intrn	309398	309460	.	+	.	Parent=CGI_10023893;
	scaffold48	TRF	Tandem_Repeat	309398	309460	126	+	.	.
scaffold48	subtractBed	intrn	383923	383977	.	+	.	Parent=CGI_10023895;
	scaffold48	TRF	Tandem_Repeat	383923	383977	94	+	.	.
scaffold48	subtractBed	intrn	383923	383977	.	-	.	Parent=CGI_10023897;
	scaffold48	TRF	Tandem_Repeat	383923	383977	94	+	.	.
scaffold48	subtractBed	intrn	408285	408660	.	-	.	Parent=CGI_10023897;
	scaffold48	TRF	Tandem_Repeat	408285	408660	282	+	.	.
scaffold48	subtractBed	intrn	408809	409300	.	-	.	Parent=CGI_10023897;
	scaffold48	TRF	Tandem_Repeat	408809	409300	358	+	.	.
scaffold48	subtractBed	intrn	411814	411855	.	-	.	Parent=CGI_10023897;
	scaffold48	TRF	Tandem_Repeat	411814	411855	84	+	.	.
scaffold48	subtractBed	intrn	423708	423757	.	-	.	Parent=CGI_10023898;
	scaffold48	TRF	Tandem_Repeat	423708	423757	100	+	.	.
scaffold48	subtractBed	intrn	428606	428662	.	-	.	Parent=CGI_10023898;
	scaffold48	TRF	Tandem_Repeat	428606	428662	114	+	.	.
scaffold48	subtractBed	intrn	433505	433897	.	-	.	Parent=CGI_10023898;
	scaffold48	TRF	Tandem_Repeat	433505	433897	588	+	.	.
scaffold48	subtractBed	intrn	457355	457379	.	+	.	Parent=CGI_10023899;
	scaffold48	TRF	Tandem_Repeat	457355	457379	50	+	.	.
scaffold48	subtractBed	intrn	530338	530628	.	+	.	Parent=CGI_10023906;
	scaffold48	WUBlastX	DNA_TcMar-Tc2	530338	530628	187	+	.	.
scaffold48	subtractBed	intrn	530580	531206	.	+	.	Parent=CGI_10023906;
	scaffold48	WUBlastX	DNA_TcMar-Tc2	530580	531206	312	+	.	.
scaffold48	subtractBed	intrn	530655	531173	.	+	.	Parent=CGI_10023906;
	scaffold48	WUBlastX	DNA_TcMar-Tc2	530655	531173	417	+	.	.
scaffold48	subtractBed	intrn	536877	536957	.	+	.	Parent=CGI_10023906;
	scaffold48	TRF	Tandem_Repeat	536877	536957	85	+	.	.
scaffold48	subtractBed	intrn	538954	539032	.	+	.	Parent=CGI_10023906;
	scaffold48	TRF	Tandem_Repeat	538954	539032	144	+	.	.
scaffold48	subtractBed	intrn	570003	570302	.	+	.	Parent=CGI_10023907;
	scaffold48	TRF	Tandem_Repeat	570003	570302	136	+	.	.
scaffold48	subtractBed	intrn	570003	570280	.	+	.	Parent=CGI_10023907;
	scaffold48	TRF	Tandem_Repeat	570003	570280	209	+	.	.
scaffold48	subtractBed	intrn	570031	570272	.	+	.	Parent=CGI_10023907;
	scaffold48	TRF	Tandem_Repeat	570031	570272	205	+	.	.
scaffold48	subtractBed	intrn	636894	636933	.	+	.	Parent=CGI_10023911;
	scaffold48	TRF	Tandem_Repeat	636894	636933	53	+	.	.
scaffold48	subtractBed	intrn	637507	637600	.	+	.	Parent=CGI_10023911;
	scaffold48	TRF	Tandem_Repeat	637507	637600	82	+	.	.
scaffold48	subtractBed	intrn	644333	645019	.	+	.	Parent=CGI_10023911;
	scaffold48	TRF	Tandem_Repeat	644333	645019	1087	+	.	.
scaffold48	subtractBed	intrn	646500	647163	.	+	.	Parent=CGI_10023911;
	scaffold48	TRF	Tandem_Repeat	646500	647163	830	+	.	.
scaffold48	subtractBed	intrn	665793	665878	.	+	.	Parent=CGI_10023913;
	scaffold48	TRF	Tandem_Repeat	665793	665878	127	+	.	.
scaffold48	subtractBed	intrn	672410	672531	.	-	.	Parent=CGI_10023914;
	scaffold48	TRF	Tandem_Repeat	672410	672531	167	+	.	.
scaffold48	subtractBed	intrn	680741	680777	.	-	.	Parent=CGI_10023915;
	scaffold48	TRF	Tandem_Repeat	680741	680777	74	+	.	.
scaffold48	subtractBed	intrn	778127	778404	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	778127	778404	276	+	.	.
scaffold48	subtractBed	intrn	778099	778408	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	778099	778408	183	+	.	.
scaffold48	subtractBed	intrn	778099	778408	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	778099	778408	171	+	.	.
scaffold48	subtractBed	intrn	778701	778788	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	778701	778788	115	+	.	.
scaffold48	subtractBed	intrn	778927	778968	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	778927	778968	50	+	.	.
scaffold48	subtractBed	intrn	788115	788588	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	788115	788588	687	+	.	.
scaffold48	subtractBed	intrn	788115	788588	.	+	.	Parent=CGI_10023918;
	scaffold48	TRF	Tandem_Repeat	788115	788588	774	+	.	.
scaffold48	subtractBed	intrn	817437	817493	.	+	.	Parent=CGI_10023920;
	scaffold48	TRF	Tandem_Repeat	817437	817493	114	+	.	.
scaffold48	subtractBed	intrn	857540	857600	.	-	.	Parent=CGI_10023922;
	scaffold48	TRF	Tandem_Repeat	857540	857600	122	+	.	.
scaffold48	subtractBed	intrn	871633	871835	.	-	.	Parent=CGI_10023922;
	scaffold48	TRF	Tandem_Repeat	871633	871835	370	+	.	.
scaffold48	subtractBed	intrn	871662	871814	.	-	.	Parent=CGI_10023922;
	scaffold48	TRF	Tandem_Repeat	871662	871814	69	+	.	.
scaffold481	subtractBed	intrn	5732	5980	.	+	.	Parent=CGI_10027190;
	scaffold481	TRF	Tandem_Repeat	5732	5980	198	+	.	.
scaffold481	subtractBed	intrn	65080	65140	.	+	.	Parent=CGI_10027193;
	scaffold481	TRF	Tandem_Repeat	65080	65140	122	+	.	.
scaffold481	subtractBed	intrn	165637	165710	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	165637	165710	76	+	.	.
scaffold481	subtractBed	intrn	165637	165697	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	165637	165697	83	+	.	.
scaffold481	subtractBed	intrn	165638	165707	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	165638	165707	67	+	.	.
scaffold481	subtractBed	intrn	170052	170112	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	170052	170112	77	+	.	.
scaffold481	subtractBed	intrn	170046	170112	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	170046	170112	127	+	.	.
scaffold481	subtractBed	intrn	170275	170985	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	170275	170985	1087	+	.	.
scaffold481	subtractBed	intrn	176887	176949	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	176887	176949	126	+	.	.
scaffold481	subtractBed	intrn	177016	177056	.	+	.	Parent=CGI_10027200;
	scaffold481	TRF	Tandem_Repeat	177016	177056	73	+	.	.
scaffold481	subtractBed	intrn	327470	327518	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	327470	327518	53	+	.	.
scaffold481	subtractBed	intrn	327470	327527	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	327470	327527	57	+	.	.
scaffold481	subtractBed	intrn	327998	328196	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	327998	328196	90	+	.	.
scaffold481	subtractBed	intrn	327979	328264	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	327979	328264	369	+	.	.
scaffold481	subtractBed	intrn	334446	334529	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	334446	334529	168	+	.	.
scaffold481	subtractBed	intrn	336242	336296	.	-	.	Parent=CGI_10027207;
	scaffold481	TRF	Tandem_Repeat	336242	336296	110	+	.	.
scaffold481	subtractBed	intrn	360463	360514	.	-	.	Parent=CGI_10027209;
	scaffold481	TRF	Tandem_Repeat	360463	360514	86	+	.	.
scaffold481	subtractBed	intrn	365055	365450	.	-	.	Parent=CGI_10027209;
	scaffold481	TRF	Tandem_Repeat	365055	365450	517	+	.	.
scaffold481	subtractBed	intrn	365416	365599	.	-	.	Parent=CGI_10027209;
	scaffold481	TRF	Tandem_Repeat	365416	365599	251	+	.	.
scaffold481	subtractBed	intrn	422182	423099	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	422182	423099	1292	+	.	.
scaffold481	subtractBed	intrn	424222	425345	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	424222	425345	1640	+	.	.
scaffold481	subtractBed	intrn	425369	425427	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	425369	425427	64	+	.	.
scaffold481	subtractBed	intrn	425369	425427	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	425369	425427	55	+	.	.
scaffold481	subtractBed	intrn	425369	425422	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	425369	425422	81	+	.	.
scaffold481	subtractBed	intrn	426306	426605	.	-	.	Parent=CGI_10027212;
	scaffold481	TRF	Tandem_Repeat	426306	426623	411	+	.	.
scaffold481	subtractBed	intrn	430775	430819	.	+	.	Parent=CGI_10027213;
	scaffold481	TRF	Tandem_Repeat	430775	430819	90	+	.	.
scaffold481	subtractBed	intrn	456545	456614	.	+	.	Parent=CGI_10027216;
	scaffold481	TRF	Tandem_Repeat	456545	456614	70	+	.	.
scaffold481	subtractBed	intrn	456544	456616	.	+	.	Parent=CGI_10027216;
	scaffold481	TRF	Tandem_Repeat	456544	456616	69	+	.	.
scaffold481	subtractBed	intrn	457585	457637	.	+	.	Parent=CGI_10027216;
	scaffold481	TRF	Tandem_Repeat	457585	457637	106	+	.	.
scaffold481	subtractBed	intrn	515003	515028	.	-	.	Parent=CGI_10027221;
	scaffold481	TRF	Tandem_Repeat	515003	515028	52	+	.	.
scaffold481	subtractBed	intrn	519679	519763	.	-	.	Parent=CGI_10027222;
	scaffold481	TRF	Tandem_Repeat	519679	519763	152	+	.	.
scaffold481	subtractBed	intrn	535610	537183	.	+	.	Parent=CGI_10027223;
	scaffold481	TRF	Tandem_Repeat	535610	537183	1978	+	.	.
scaffold481	subtractBed	intrn	549422	549453	.	-	.	Parent=CGI_10027224;
	scaffold481	TRF	Tandem_Repeat	549422	549453	64	+	.	.
scaffold481	subtractBed	intrn	577116	577918	.	-	.	Parent=CGI_10027225;
	scaffold481	TRF	Tandem_Repeat	577116	577918	844	+	.	.
scaffold481	subtractBed	intrn	577925	578280	.	-	.	Parent=CGI_10027225;
	scaffold481	TRF	Tandem_Repeat	577925	578280	440	+	.	.
scaffold481	subtractBed	intrn	583201	583247	.	-	.	Parent=CGI_10027226;
	scaffold481	TRF	Tandem_Repeat	583201	583247	76	+	.	.
scaffold481	subtractBed	intrn	584337	584647	.	-	.	Parent=CGI_10027226;
	scaffold481	TRF	Tandem_Repeat	584337	584647	424	+	.	.
scaffold481	subtractBed	intrn	589780	589812	.	-	.	Parent=CGI_10027226;
	scaffold481	TRF	Tandem_Repeat	589780	589812	66	+	.	.
scaffold481	subtractBed	intrn	623486	623572	.	+	.	Parent=CGI_10027228;
	scaffold481	TRF	Tandem_Repeat	623486	623572	174	+	.	.
scaffold481	subtractBed	intrn	624010	624081	.	+	.	Parent=CGI_10027228;
	scaffold481	TRF	Tandem_Repeat	624010	624081	135	+	.	.
scaffold481	subtractBed	intrn	670304	670570	.	+	.	Parent=CGI_10027232;
	scaffold481	TRF	Tandem_Repeat	670304	670570	489	+	.	.
scaffold481	subtractBed	intrn	674343	674388	.	+	.	Parent=CGI_10027232;
	scaffold481	TRF	Tandem_Repeat	674343	674388	92	+	.	.
scaffold481	subtractBed	intrn	677817	677863	.	+	.	Parent=CGI_10027232;
	scaffold481	TRF	Tandem_Repeat	677817	677863	94	+	.	.
scaffold481	subtractBed	intrn	681548	681582	.	+	.	Parent=CGI_10027232;
	scaffold481	TRF	Tandem_Repeat	681548	681582	70	+	.	.
scaffold481	subtractBed	intrn	685266	685430	.	+	.	Parent=CGI_10027232;
	scaffold481	WUBlastX	DNA_TcMar-m44	685266	685430	29	+	.	.
scaffold481	subtractBed	intrn	685678	686607	.	+	.	Parent=CGI_10027232;
	scaffold481	WUBlastX	DNA_TcMar-m44	685678	686607	583	+	.	.
scaffold481	subtractBed	intrn	698080	698104	.	+	.	Parent=CGI_10027233;
	scaffold481	TRF	Tandem_Repeat	698080	698104	50	+	.	.
scaffold481	subtractBed	intrn	725735	725772	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	725735	725772	60	+	.	.
scaffold481	subtractBed	intrn	725818	726603	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	725818	726603	910	+	.	.
scaffold481	subtractBed	intrn	727549	727695	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	727549	727695	73	+	.	.
scaffold481	subtractBed	intrn	727611	727740	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	727611	727740	93	+	.	.
scaffold481	subtractBed	intrn	735093	735342	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	735093	735342	227	+	.	.
scaffold481	subtractBed	intrn	750190	750248	.	+	.	Parent=CGI_10027235;
	scaffold481	TRF	Tandem_Repeat	750190	750248	111	+	.	.
scaffold481	subtractBed	intrn	757884	757929	.	+	.	Parent=CGI_10027237;
	scaffold481	TRF	Tandem_Repeat	757884	757929	92	+	.	.
scaffold481	subtractBed	intrn	771011	771057	.	+	.	Parent=CGI_10027240;
	scaffold481	TRF	Tandem_Repeat	771011	771057	94	+	.	.
scaffold481	subtractBed	intrn	779623	779647	.	+	.	Parent=CGI_10027242;
	scaffold481	TRF	Tandem_Repeat	779623	779647	50	+	.	.
scaffold481	subtractBed	intrn	799491	799521	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	799491	799521	62	+	.	.
scaffold481	subtractBed	intrn	801018	801103	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	801018	801103	165	+	.	.
scaffold481	subtractBed	intrn	805694	805814	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	805694	805814	163	+	.	.
scaffold481	subtractBed	intrn	806040	806080	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	806040	806080	82	+	.	.
scaffold481	subtractBed	intrn	808333	808374	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	808333	808374	68	+	.	.
scaffold481	subtractBed	intrn	808332	808400	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	808332	808400	65	+	.	.
scaffold481	subtractBed	intrn	808331	808399	.	+	.	Parent=CGI_10027244;
	scaffold481	TRF	Tandem_Repeat	808331	808399	63	+	.	.
scaffold481	subtractBed	intrn	820660	820706	.	-	.	Parent=CGI_10027246;
	scaffold481	TRF	Tandem_Repeat	820660	820706	85	+	.	.
scaffold481	subtractBed	intrn	835274	835310	.	+	.	Parent=CGI_10027247;
	scaffold481	TRF	Tandem_Repeat	835274	835310	65	+	.	.
scaffold481	subtractBed	intrn	864620	864812	.	-	.	Parent=CGI_10027248;
	scaffold481	TRF	Tandem_Repeat	864620	864812	89	+	.	.
scaffold481	subtractBed	intrn	866011	866071	.	-	.	Parent=CGI_10027248;
	scaffold481	TRF	Tandem_Repeat	866011	866071	122	+	.	.
scaffold481	subtractBed	intrn	872051	872101	.	-	.	Parent=CGI_10027248;
	scaffold481	TRF	Tandem_Repeat	872051	872101	84	+	.	.
scaffold481	subtractBed	intrn	872051	872101	.	-	.	Parent=CGI_10027248;
	scaffold481	TRF	Tandem_Repeat	872051	872101	66	+	.	.
scaffold481	subtractBed	intrn	905265	905298	.	+	.	Parent=CGI_10027253;
	scaffold481	TRF	Tandem_Repeat	905265	905298	68	+	.	.
scaffold481	subtractBed	intrn	913080	913150	.	+	.	Parent=CGI_10027253;
	scaffold481	TRF	Tandem_Repeat	913080	913150	69	+	.	.
scaffold481	subtractBed	intrn	926037	926062	.	-	.	Parent=CGI_10027254;
	scaffold481	TRF	Tandem_Repeat	926037	926062	52	+	.	.
scaffold481	subtractBed	intrn	997607	997632	.	-	.	Parent=CGI_10027256;
	scaffold481	TRF	Tandem_Repeat	997607	997632	52	+	.	.
scaffold481	subtractBed	intrn	1030377	1030438	.	-	.	Parent=CGI_10027257;
	scaffold481	TRF	Tandem_Repeat	1030377	1030438	115	+	.	.
scaffold481	subtractBed	intrn	1038164	1038278	.	-	.	Parent=CGI_10027258;
	scaffold481	WUBlastX	DNA_TcMar-ISRm1	1038033	1038278	33	-	.	.
scaffold481	subtractBed	intrn	1054669	1054749	.	-	.	Parent=CGI_10027259;
	scaffold481	TRF	Tandem_Repeat	1054669	1054749	135	+	.	.
scaffold481	subtractBed	intrn	1053896	1053982	.	-	.	Parent=CGI_10027259;
	scaffold481	WUBlastX	DNA_hAT-Tip100	1053896	1053982	21	+	.	.
scaffold481	subtractBed	intrn	1054023	1054388	.	-	.	Parent=CGI_10027259;
	scaffold481	WUBlastX	DNA_hAT-Tip100	1054023	1054388	85	+	.	.
scaffold481	subtractBed	intrn	1053921	1054268	.	-	.	Parent=CGI_10027259;
	scaffold481	WUBlastX	DNA_hAT-Tip100	1053921	1054268	45	+	.	.
scaffold481	subtractBed	intrn	1090102	1090154	.	+	.	Parent=CGI_10027263;
	scaffold481	TRF	Tandem_Repeat	1090102	1090154	106	+	.	.
scaffold481	subtractBed	intrn	1121644	1121684	.	-	.	Parent=CGI_10027264;
	scaffold481	TRF	Tandem_Repeat	1121644	1121684	82	+	.	.
scaffold481	subtractBed	intrn	1209765	1209902	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1209765	1209902	62	-	.	.
scaffold481	subtractBed	intrn	1198941	1199468	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1198941	1199468	103	+	.	.
scaffold481	subtractBed	intrn	1209726	1210037	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_CR1	1209726	1210037	34	-	.	.
scaffold481	subtractBed	intrn	1208958	1209881	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1208958	1209881	88	-	.	.
scaffold481	subtractBed	intrn	1209299	1209541	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1209299	1209541	98	-	.	.
scaffold481	subtractBed	intrn	1210676	1210969	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_Crypton	1210676	1210969	70	+	.	.
scaffold481	subtractBed	intrn	1211520	1211816	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_Crypton	1211520	1211816	74	+	.	.
scaffold481	subtractBed	intrn	1216164	1216901	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216164	1216901	173	-	.	.
scaffold481	subtractBed	intrn	1216428	1217159	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216428	1217159	174	-	.	.
scaffold481	subtractBed	intrn	1217188	1217259	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_RTE-X	1217188	1217259	20	-	.	.
scaffold481	subtractBed	intrn	1218051	1219280	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1218051	1219280	299	-	.	.
scaffold481	subtractBed	intrn	1216305	1216877	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216305	1216877	209	-	.	.
scaffold481	subtractBed	intrn	1216428	1216985	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216428	1216985	256	-	.	.
scaffold481	subtractBed	intrn	1216984	1217247	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216984	1217247	99	-	.	.
scaffold481	subtractBed	intrn	1217687	1218016	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Copia	1217687	1218016	25	-	.	.
scaffold481	subtractBed	intrn	1219310	1219873	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1219310	1219873	562	-	.	.
scaffold481	subtractBed	intrn	1213849	1214187	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_Sola	1213639	1214187	38	+	.	.
scaffold481	subtractBed	intrn	1216428	1216892	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1216428	1216892	291	-	.	.
scaffold481	subtractBed	intrn	1214346	1215020	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_Sola	1214346	1215020	111	+	.	.
scaffold481	subtractBed	intrn	1217774	1218256	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1217774	1218256	103	-	.	.
scaffold481	subtractBed	intrn	1218255	1219388	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1218255	1219388	840	-	.	.
scaffold481	subtractBed	intrn	1219310	1220215	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1219310	1220215	385	-	.	.
scaffold481	subtractBed	intrn	1222923	1222970	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_IS4EU	1222923	1223102	76	+	.	.
scaffold481	subtractBed	intrn	1222899	1222970	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_IS4EU	1222899	1223114	50	+	.	.
scaffold481	subtractBed	intrn	1222683	1222805	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_IS4EU	1222683	1222805	49	+	.	.
scaffold481	subtractBed	intrn	1223253	1224059	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	DNA_IS4EU	1223253	1224059	359	-	.	.
scaffold481	subtractBed	intrn	1225973	1226578	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1225973	1226578	134	-	.	.
scaffold481	subtractBed	intrn	1226105	1227499	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1226105	1227499	798	-	.	.
scaffold481	subtractBed	intrn	1227733	1227825	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1227733	1227825	62	-	.	.
scaffold481	subtractBed	intrn	1227495	1227722	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LTR_Gypsy	1227495	1227722	139	-	.	.
scaffold481	subtractBed	intrn	1229223	1229483	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1229223	1229483	37	-	.	.
scaffold481	subtractBed	intrn	1229090	1229233	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1229090	1229233	41	-	.	.
scaffold481	subtractBed	intrn	1229452	1229664	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1229452	1229664	94	-	.	.
scaffold481	subtractBed	intrn	1234419	1234721	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L1-Tx1	1234419	1234721	76	+	.	.
scaffold481	subtractBed	intrn	1229536	1229733	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1229536	1229733	75	-	.	.
scaffold481	subtractBed	intrn	1229515	1229688	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_L2	1229515	1229688	98	-	.	.
scaffold481	subtractBed	intrn	1234669	1234854	.	+	.	Parent=CGI_10027266;
	scaffold481	WUBlastX	LINE_CR1	1234669	1234854	74	+	.	.
scaffold482	subtractBed	intrn	42543	42626	.	+	.	Parent=CGI_10010992;
	scaffold482	WUBlastX	DNA_Kolobok-Hyd	42374	43417	36	+	.	.
scaffold482	subtractBed	intrn	42543	42559	.	+	.	Parent=CGI_10010992;
	scaffold482	WUBlastX	DNA_Kolobok-Hyd	42494	42559	45	+	.	.
scaffold482	subtractBed	intrn	42831	43277	.	+	.	Parent=CGI_10010992;
	scaffold482	WUBlastX	DNA_Kolobok-Hyd	42374	43417	36	+	.	.
scaffold482	subtractBed	intrn	42831	42871	.	+	.	Parent=CGI_10010992;
	scaffold482	WUBlastX	DNA_Kolobok-Hyd	42641	42871	40	+	.	.
scaffold482	subtractBed	intrn	57747	57788	.	+	.	Parent=CGI_10010994;
	scaffold482	TRF	Tandem_Repeat	57747	57788	84	+	.	.
scaffold482	subtractBed	intrn	58744	58769	.	+	.	Parent=CGI_10010994;
	scaffold482	TRF	Tandem_Repeat	58744	58769	52	+	.	.
scaffold482	subtractBed	intrn	94119	94154	.	-	.	Parent=CGI_10010995;
	scaffold482	TRF	Tandem_Repeat	94119	94154	54	+	.	.
scaffold482	subtractBed	intrn	94648	95066	.	-	.	Parent=CGI_10010995;
	scaffold482	TRF	Tandem_Repeat	94648	95066	422	+	.	.
scaffold482	subtractBed	intrn	99045	99083	.	-	.	Parent=CGI_10010995;
	scaffold482	TRF	Tandem_Repeat	99045	99083	78	+	.	.
scaffold482	subtractBed	intrn	110670	110706	.	+	.	Parent=CGI_10010996;
	scaffold482	TRF	Tandem_Repeat	110670	110706	74	+	.	.
scaffold482	subtractBed	intrn	113642	113671	.	+	.	Parent=CGI_10010996;
	scaffold482	TRF	Tandem_Repeat	113642	113671	51	+	.	.
scaffold482	subtractBed	intrn	112751	113431	.	+	.	Parent=CGI_10010996;
	scaffold482	WUBlastX	LINE_RTE-X	112751	113431	37	-	.	.
scaffold482	subtractBed	intrn	113198	113401	.	+	.	Parent=CGI_10010996;
	scaffold482	WUBlastX	LINE_RTE-X	113198	113401	51	-	.	.
scaffold482	subtractBed	intrn	113412	113603	.	+	.	Parent=CGI_10010996;
	scaffold482	WUBlastX	LINE_RTE-X	113412	113603	27	-	.	.
scaffold482	subtractBed	intrn	112657	112737	.	+	.	Parent=CGI_10010996;
	scaffold482	WUBlastX	LINE_RTE-X	112657	112737	29	-	.	.
scaffold483	subtractBed	intrn	10790	11158	.	+	.	Parent=CGI_10007746;
	scaffold483	WUBlastX	DNA_Harbinger	10790	11158	128	-	.	.
scaffold483	subtractBed	intrn	73997	74033	.	+	.	Parent=CGI_10007747;
	scaffold483	TRF	Tandem_Repeat	73997	74033	74	+	.	.
scaffold483	subtractBed	intrn	87212	87270	.	-	.	Parent=CGI_10007748;
	scaffold483	TRF	Tandem_Repeat	87212	87270	54	+	.	.
scaffold483	subtractBed	intrn	81866	82110	.	-	.	Parent=CGI_10007748;
	scaffold483	TRF	Tandem_Repeat	81866	82110	355	+	.	.
scaffold483	subtractBed	intrn	88764	88912	.	-	.	Parent=CGI_10007748;
	scaffold483	TRF	Tandem_Repeat	88764	88912	138	+	.	.
scaffold483	subtractBed	intrn	143037	143070	.	+	.	Parent=CGI_10007751;
	scaffold483	TRF	Tandem_Repeat	143037	143070	68	+	.	.
scaffold483	subtractBed	intrn	160705	160911	.	-	.	Parent=CGI_10007752;
	scaffold483	WUBlastX	LINE_RTE-X	160705	160911	24	-	.	.
scaffold483	subtractBed	intrn	160777	160947	.	-	.	Parent=CGI_10007752;
	scaffold483	WUBlastX	LINE_RTE-X	160777	160947	41	-	.	.
scaffold484	subtractBed	intrn	104377	104435	.	-	.	Parent=CGI_10005367;
	scaffold484	TRF	Tandem_Repeat	104377	104435	100	+	.	.
scaffold484	subtractBed	intrn	119390	119429	.	+	.	Parent=CGI_10005368;
	scaffold484	TRF	Tandem_Repeat	119390	119429	80	+	.	.
scaffold485	subtractBed	intrn	579	655	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	579	655	57	+	.	.
scaffold485	subtractBed	intrn	581	647	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	581	647	66	+	.	.
scaffold485	subtractBed	intrn	583	655	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	583	655	56	+	.	.
scaffold485	subtractBed	intrn	4435	4474	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	4435	4474	55	+	.	.
scaffold485	subtractBed	intrn	9720	9758	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	9720	9758	60	+	.	.
scaffold485	subtractBed	intrn	15806	15847	.	-	.	Parent=CGI_10024133;
	scaffold485	TRF	Tandem_Repeat	15806	15847	70	+	.	.
scaffold485	subtractBed	intrn	36955	36979	.	+	.	Parent=CGI_10024135;
	scaffold485	TRF	Tandem_Repeat	36955	36979	50	+	.	.
scaffold485	subtractBed	intrn	37807	37856	.	+	.	Parent=CGI_10024135;
	scaffold485	TRF	Tandem_Repeat	37807	37856	100	+	.	.
scaffold485	subtractBed	intrn	40269	40323	.	+	.	Parent=CGI_10024135;
	scaffold485	TRF	Tandem_Repeat	40269	40323	110	+	.	.
scaffold485	subtractBed	intrn	62582	63120	.	-	.	Parent=CGI_10024137;
	scaffold485	TRF	Tandem_Repeat	62582	63120	724	+	.	.
scaffold485	subtractBed	intrn	84678	84729	.	+	.	Parent=CGI_10024139;
	scaffold485	TRF	Tandem_Repeat	84678	84729	104	+	.	.
scaffold485	subtractBed	intrn	96029	96056	.	+	.	Parent=CGI_10024142;
	scaffold485	TRF	Tandem_Repeat	96029	96056	56	+	.	.
scaffold485	subtractBed	intrn	96879	96988	.	+	.	Parent=CGI_10024142;
	scaffold485	TRF	Tandem_Repeat	96879	96988	168	+	.	.
scaffold485	subtractBed	intrn	112240	112282	.	-	.	Parent=CGI_10024143;
	scaffold485	TRF	Tandem_Repeat	112240	112282	63	+	.	.
scaffold485	subtractBed	intrn	244199	244307	.	+	.	Parent=CGI_10024152;
	scaffold485	TRF	Tandem_Repeat	244199	244307	164	+	.	.
scaffold485	subtractBed	intrn	244199	244337	.	+	.	Parent=CGI_10024152;
	scaffold485	TRF	Tandem_Repeat	244199	244337	194	+	.	.
scaffold485	subtractBed	intrn	244198	244337	.	+	.	Parent=CGI_10024152;
	scaffold485	TRF	Tandem_Repeat	244198	244337	191	+	.	.
scaffold485	subtractBed	intrn	245170	245254	.	+	.	Parent=CGI_10024152;
	scaffold485	TRF	Tandem_Repeat	245170	245254	149	+	.	.
scaffold485	subtractBed	intrn	254276	254302	.	+	.	Parent=CGI_10024152;
	scaffold485	TRF	Tandem_Repeat	254276	254302	54	+	.	.
scaffold485	subtractBed	intrn	286640	286676	.	+	.	Parent=CGI_10024155;
	scaffold485	TRF	Tandem_Repeat	286640	286676	74	+	.	.
scaffold485	subtractBed	intrn	288869	288912	.	+	.	Parent=CGI_10024155;
	scaffold485	TRF	Tandem_Repeat	288869	288912	88	+	.	.
scaffold485	subtractBed	intrn	338294	339389	.	+	.	Parent=CGI_10024157;
	scaffold485	TRF	Tandem_Repeat	338294	339389	1626	+	.	.
scaffold485	subtractBed	intrn	358511	358668	.	-	.	Parent=CGI_10024158;
	scaffold485	TRF	Tandem_Repeat	358511	358668	84	+	.	.
scaffold485	subtractBed	intrn	384248	384283	.	+	.	Parent=CGI_10024162;
	scaffold485	TRF	Tandem_Repeat	384248	384283	72	+	.	.
scaffold485	subtractBed	intrn	472428	472458	.	-	.	Parent=CGI_10024167;
	scaffold485	TRF	Tandem_Repeat	472428	472458	62	+	.	.
scaffold485	subtractBed	intrn	485039	485959	.	+	.	Parent=CGI_10024169;
	scaffold485	TRF	Tandem_Repeat	485039	485959	1276	+	.	.
scaffold485	subtractBed	intrn	487175	487203	.	+	.	Parent=CGI_10024169;
	scaffold485	TRF	Tandem_Repeat	487175	487203	58	+	.	.
scaffold485	subtractBed	intrn	496340	496384	.	+	.	Parent=CGI_10024170;
	scaffold485	TRF	Tandem_Repeat	496340	496384	90	+	.	.
scaffold485	subtractBed	intrn	505435	505756	.	+	.	Parent=CGI_10024170;
	scaffold485	TRF	Tandem_Repeat	505381	505756	689	+	.	.
scaffold485	subtractBed	intrn	519173	519220	.	+	.	Parent=CGI_10024172;
	scaffold485	TRF	Tandem_Repeat	519173	519220	60	+	.	.
scaffold485	subtractBed	intrn	519441	519502	.	+	.	Parent=CGI_10024172;
	scaffold485	TRF	Tandem_Repeat	519441	519502	124	+	.	.
scaffold485	subtractBed	intrn	542895	543083	.	+	.	Parent=CGI_10024175;
	scaffold485	TRF	Tandem_Repeat	542895	543083	344	+	.	.
scaffold485	subtractBed	intrn	554979	555011	.	-	.	Parent=CGI_10024177;
	scaffold485	TRF	Tandem_Repeat	554979	555011	66	+	.	.
scaffold485	subtractBed	intrn	555383	555602	.	-	.	Parent=CGI_10024177;
	scaffold485	TRF	Tandem_Repeat	555383	555602	368	+	.	.
scaffold485	subtractBed	intrn	556367	556526	.	-	.	Parent=CGI_10024177;
	scaffold485	TRF	Tandem_Repeat	556367	556526	67	+	.	.
scaffold485	subtractBed	intrn	560447	560482	.	-	.	Parent=CGI_10024178;
	scaffold485	TRF	Tandem_Repeat	560447	560482	72	+	.	.
scaffold485	subtractBed	intrn	584158	584202	.	-	.	Parent=CGI_10024180;
	scaffold485	TRF	Tandem_Repeat	584158	584202	81	+	.	.
scaffold485	subtractBed	intrn	652542	652863	.	+	.	Parent=CGI_10024186;
	scaffold485	TRF	Tandem_Repeat	652542	652894	499	+	.	.
scaffold485	subtractBed	intrn	667925	667953	.	-	.	Parent=CGI_10024187;
	scaffold485	TRF	Tandem_Repeat	667925	667953	58	+	.	.
scaffold485	subtractBed	intrn	738980	739498	.	-	.	Parent=CGI_10024191;
	scaffold485	WUBlastX	LINE_RTE-BovB	738980	739498	227	+	.	.
scaffold485	subtractBed	intrn	738428	739498	.	-	.	Parent=CGI_10024191;
	scaffold485	WUBlastX	LINE_RTE-BovB	738428	739498	122	+	.	.
scaffold485	subtractBed	intrn	738404	738544	.	-	.	Parent=CGI_10024191;
	scaffold485	WUBlastX	LINE_RTE-BovB	738404	738544	50	+	.	.
scaffold485	subtractBed	intrn	742325	743835	.	-	.	Parent=CGI_10024191;
	scaffold485	TRF	Tandem_Repeat	742325	743835	1651	+	.	.
scaffold485	subtractBed	intrn	738980	739498	.	+	.	Parent=CGI_10024192;
	scaffold485	WUBlastX	LINE_RTE-BovB	738980	739498	227	+	.	.
scaffold485	subtractBed	intrn	738428	739498	.	+	.	Parent=CGI_10024192;
	scaffold485	WUBlastX	LINE_RTE-BovB	738428	739498	122	+	.	.
scaffold485	subtractBed	intrn	738404	738544	.	+	.	Parent=CGI_10024192;
	scaffold485	WUBlastX	LINE_RTE-BovB	738404	738544	50	+	.	.
scaffold485	subtractBed	intrn	742325	743835	.	+	.	Parent=CGI_10024192;
	scaffold485	TRF	Tandem_Repeat	742325	743835	1651	+	.	.
scaffold485	subtractBed	intrn	771238	771286	.	+	.	Parent=CGI_10024194;
	scaffold485	TRF	Tandem_Repeat	771238	771286	98	+	.	.
scaffold485	subtractBed	intrn	826770	826895	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	826770	826895	49	+	.	.
scaffold485	subtractBed	intrn	830084	830266	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	830084	830266	55	-	.	.
scaffold485	subtractBed	intrn	828906	829094	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	828906	829094	94	-	.	.
scaffold485	subtractBed	intrn	829055	829798	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	829055	829798	347	-	.	.
scaffold485	subtractBed	intrn	830177	830446	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	830177	830446	58	-	.	.
scaffold485	subtractBed	intrn	826803	826976	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	826803	826976	94	+	.	.
scaffold485	subtractBed	intrn	825441	825587	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	825441	825587	52	+	.	.
scaffold485	subtractBed	intrn	826121	826444	.	-	.	Parent=CGI_10024196;
	scaffold485	WUBlastX	DNA_IS4EU	826121	826444	118	+	.	.
scaffold487	subtractBed	intrn	132739	132793	.	+	.	Parent=CGI_10017041;
	scaffold487	TRF	Tandem_Repeat	132739	132793	110	+	.	.
scaffold487	subtractBed	intrn	137322	137880	.	+	.	Parent=CGI_10017041;
	scaffold487	TRF	Tandem_Repeat	137322	137880	822	+	.	.
scaffold487	subtractBed	intrn	138142	138560	.	+	.	Parent=CGI_10017041;
	scaffold487	TRF	Tandem_Repeat	138134	138560	629	+	.	.
scaffold487	subtractBed	intrn	180151	180189	.	+	.	Parent=CGI_10017043;
	scaffold487	TRF	Tandem_Repeat	180151	180189	51	+	.	.
scaffold487	subtractBed	intrn	225268	225293	.	-	.	Parent=CGI_10017045;
	scaffold487	TRF	Tandem_Repeat	225268	225293	52	+	.	.
scaffold487	subtractBed	intrn	284584	284877	.	+	.	Parent=CGI_10017050;
	scaffold487	TRF	Tandem_Repeat	284584	284877	442	+	.	.
scaffold487	subtractBed	intrn	371238	371273	.	+	.	Parent=CGI_10017051;
	scaffold487	TRF	Tandem_Repeat	371238	371273	56	+	.	.
scaffold487	subtractBed	intrn	439710	439757	.	+	.	Parent=CGI_10017053;
	scaffold487	TRF	Tandem_Repeat	439710	439757	69	+	.	.
scaffold487	subtractBed	intrn	439701	439757	.	+	.	Parent=CGI_10017053;
	scaffold487	TRF	Tandem_Repeat	439701	439757	78	+	.	.
scaffold487	subtractBed	intrn	432993	436949	.	+	.	Parent=CGI_10017053;
	scaffold487	WUBlastX	LTR_Gypsy	432993	436949	3602	-	.	.
scaffold487	subtractBed	intrn	439977	439995	.	+	.	Parent=CGI_10017053;
	scaffold487	WUBlastX	DNA_P	439977	440111	21	-	.	.
scaffold487	subtractBed	intrn	440099	440111	.	+	.	Parent=CGI_10017053;
	scaffold487	WUBlastX	DNA_P	439977	440111	21	-	.	.
scaffold487	subtractBed	intrn	440099	440111	.	-	.	Parent=CGI_10017054;
	scaffold487	WUBlastX	DNA_P	439977	440111	21	-	.	.
scaffold487	subtractBed	intrn	441902	442141	.	-	.	Parent=CGI_10017054;
	scaffold487	WUBlastX	DNA_Kolobok	441902	442141	95	+	.	.
scaffold487	subtractBed	intrn	441998	442141	.	-	.	Parent=CGI_10017054;
	scaffold487	WUBlastX	DNA_Kolobok	441998	442141	95	+	.	.
scaffold487	subtractBed	intrn	484013	484210	.	+	.	Parent=CGI_10017056;
	scaffold487	WUBlastX	LINE_RTE-X	484013	484210	41	-	.	.
scaffold488	subtractBed	intrn	45248	45541	.	-	.	Parent=CGI_10005407;
	scaffold488	WUBlastX	LINE_L2	45248	45541	160	-	.	.
scaffold488	subtractBed	intrn	45161	45541	.	-	.	Parent=CGI_10005407;
	scaffold488	WUBlastX	LINE_L2	45161	45541	89	-	.	.
scaffold488	subtractBed	intrn	45236	45625	.	-	.	Parent=CGI_10005407;
	scaffold488	WUBlastX	LINE_L2	45236	45625	118	-	.	.
scaffold488	subtractBed	intrn	94722	94779	.	+	.	Parent=CGI_10005410;
	scaffold488	TRF	Tandem_Repeat	94722	94779	116	+	.	.
scaffold488	subtractBed	intrn	107956	108007	.	+	.	Parent=CGI_10005412;
	scaffold488	TRF	Tandem_Repeat	107956	108007	54	+	.	.
scaffold488	subtractBed	intrn	107953	108014	.	+	.	Parent=CGI_10005412;
	scaffold488	TRF	Tandem_Repeat	107953	108014	53	+	.	.
scaffold489	subtractBed	intrn	38319	38354	.	+	.	Parent=CGI_10020226;
	scaffold489	TRF	Tandem_Repeat	38319	38354	72	+	.	.
scaffold489	subtractBed	intrn	96414	96500	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	96414	96500	86	+	.	.
scaffold489	subtractBed	intrn	96960	97032	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	96960	97032	146	+	.	.
scaffold489	subtractBed	intrn	97981	98029	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	97981	98029	98	+	.	.
scaffold489	subtractBed	intrn	98235	98279	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	98235	98279	90	+	.	.
scaffold489	subtractBed	intrn	99402	99572	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	99402	99572	105	+	.	.
scaffold489	subtractBed	intrn	99441	99531	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	99441	99531	82	+	.	.
scaffold489	subtractBed	intrn	99517	99577	.	-	.	Parent=CGI_10020228;
	scaffold489	TRF	Tandem_Repeat	99517	99577	50	+	.	.
scaffold489	subtractBed	intrn	107576	108610	.	-	.	Parent=CGI_10020228;
	scaffold489	WUBlastX	DNA_Crypton	107576	108610	594	-	.	.
scaffold489	subtractBed	intrn	112001	112126	.	-	.	Parent=CGI_10020228;
	scaffold489	WUBlastX	DNA_Harbinger	112001	112126	124	-	.	.
scaffold489	subtractBed	intrn	112688	113044	.	-	.	Parent=CGI_10020228;
	scaffold489	WUBlastX	DNA_Harbinger	112688	113044	129	-	.	.
scaffold489	subtractBed	intrn	112724	113137	.	-	.	Parent=CGI_10020228;
	scaffold489	WUBlastX	DNA_Harbinger	112724	113137	105	-	.	.
scaffold489	subtractBed	intrn	112760	113209	.	-	.	Parent=CGI_10020228;
	scaffold489	WUBlastX	DNA_Harbinger	112760	113209	22	-	.	.
scaffold489	subtractBed	intrn	132065	132106	.	+	.	Parent=CGI_10020229;
	scaffold489	TRF	Tandem_Repeat	132065	132106	84	+	.	.
scaffold489	subtractBed	intrn	144588	144635	.	+	.	Parent=CGI_10020230;
	scaffold489	TRF	Tandem_Repeat	144588	144635	64	+	.	.
scaffold489	subtractBed	intrn	144808	145499	.	+	.	Parent=CGI_10020230;
	scaffold489	TRF	Tandem_Repeat	144808	145499	965	+	.	.
scaffold489	subtractBed	intrn	149051	149090	.	+	.	Parent=CGI_10020230;
	scaffold489	TRF	Tandem_Repeat	149051	149090	80	+	.	.
scaffold489	subtractBed	intrn	172842	173819	.	-	.	Parent=CGI_10020231;
	scaffold489	TRF	Tandem_Repeat	172842	173819	966	+	.	.
scaffold489	subtractBed	intrn	214035	214073	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	214035	214073	78	+	.	.
scaffold489	subtractBed	intrn	215648	216117	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	215648	216117	206	+	.	.
scaffold489	subtractBed	intrn	215657	216126	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	215657	216126	481	+	.	.
scaffold489	subtractBed	intrn	215660	216126	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	215660	216126	469	+	.	.
scaffold489	subtractBed	intrn	215750	215799	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	215750	215799	55	+	.	.
scaffold489	subtractBed	intrn	215968	216042	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	215968	216042	60	+	.	.
scaffold489	subtractBed	intrn	216008	216075	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	216008	216075	52	+	.	.
scaffold489	subtractBed	intrn	222867	222916	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	222867	222916	100	+	.	.
scaffold489	subtractBed	intrn	222916	222959	.	-	.	Parent=CGI_10020233;
	scaffold489	TRF	Tandem_Repeat	222916	222959	88	+	.	.
scaffold489	subtractBed	intrn	364003	364233	.	+	.	Parent=CGI_10020244;
	scaffold489	TRF	Tandem_Repeat	364003	364233	141	+	.	.
scaffold489	subtractBed	intrn	364321	364351	.	+	.	Parent=CGI_10020244;
	scaffold489	TRF	Tandem_Repeat	364321	364351	62	+	.	.
scaffold489	subtractBed	intrn	380689	380881	.	-	.	Parent=CGI_10020247;
	scaffold489	TRF	Tandem_Repeat	380689	380881	109	+	.	.
scaffold489	subtractBed	intrn	384199	384246	.	-	.	Parent=CGI_10020247;
	scaffold489	TRF	Tandem_Repeat	384199	384246	96	+	.	.
scaffold489	subtractBed	intrn	397968	398019	.	+	.	Parent=CGI_10020248;
	scaffold489	TRF	Tandem_Repeat	397968	398019	68	+	.	.
scaffold489	subtractBed	intrn	403014	403106	.	+	.	Parent=CGI_10020248;
	scaffold489	TRF	Tandem_Repeat	403014	403106	80	+	.	.
scaffold489	subtractBed	intrn	403025	403780	.	+	.	Parent=CGI_10020248;
	scaffold489	TRF	Tandem_Repeat	403025	403780	746	+	.	.
scaffold489	subtractBed	intrn	471471	472279	.	+	.	Parent=CGI_10020251;
	scaffold489	TRF	Tandem_Repeat	471471	472279	1232	+	.	.
scaffold489	subtractBed	intrn	472302	473188	.	+	.	Parent=CGI_10020251;
	scaffold489	TRF	Tandem_Repeat	472302	473188	1133	+	.	.
scaffold489	subtractBed	intrn	474349	474420	.	+	.	Parent=CGI_10020251;
	scaffold489	TRF	Tandem_Repeat	474349	474420	58	+	.	.
scaffold489	subtractBed	intrn	554133	554171	.	-	.	Parent=CGI_10020253;
	scaffold489	TRF	Tandem_Repeat	554133	554171	69	+	.	.
scaffold489	subtractBed	intrn	559324	559356	.	-	.	Parent=CGI_10020253;
	scaffold489	TRF	Tandem_Repeat	559324	559356	66	+	.	.
scaffold489	subtractBed	intrn	567677	568027	.	-	.	Parent=CGI_10020253;
	scaffold489	TRF	Tandem_Repeat	567677	568027	152	+	.	.
scaffold489	subtractBed	intrn	567680	568123	.	-	.	Parent=CGI_10020253;
	scaffold489	TRF	Tandem_Repeat	567680	568123	197	+	.	.
scaffold49	subtractBed	intrn	90425	90487	.	+	.	Parent=CGI_10013273;
	scaffold49	TRF	Tandem_Repeat	90425	90487	126	+	.	.
scaffold49	subtractBed	intrn	142903	142951	.	+	.	Parent=CGI_10013281;
	scaffold49	TRF	Tandem_Repeat	142903	142951	98	+	.	.
scaffold49	subtractBed	intrn	144636	144695	.	+	.	Parent=CGI_10013281;
	scaffold49	TRF	Tandem_Repeat	144636	144695	102	+	.	.
scaffold49	subtractBed	intrn	246655	246912	.	-	.	Parent=CGI_10013285;
	scaffold49	WUBlastX	LINE_L1-Tx1	246655	246912	21	-	.	.
scaffold49	subtractBed	intrn	254181	255044	.	-	.	Parent=CGI_10013285;
	scaffold49	WUBlastX	DNA_IS	254181	255044	1443	+	.	.
scaffold49	subtractBed	intrn	259734	259759	.	-	.	Parent=CGI_10013285;
	scaffold49	TRF	Tandem_Repeat	259734	259759	52	+	.	.
scaffold49	subtractBed	intrn	262478	262512	.	-	.	Parent=CGI_10013285;
	scaffold49	TRF	Tandem_Repeat	262478	262512	52	+	.	.
scaffold49	subtractBed	intrn	272805	272872	.	-	.	Parent=CGI_10013286;
	scaffold49	TRF	Tandem_Repeat	272805	272872	57	+	.	.
scaffold49	subtractBed	intrn	286931	286978	.	-	.	Parent=CGI_10013286;
	scaffold49	TRF	Tandem_Repeat	286931	286978	87	+	.	.
scaffold49	subtractBed	intrn	289295	289344	.	-	.	Parent=CGI_10013286;
	scaffold49	TRF	Tandem_Repeat	289295	289344	100	+	.	.
scaffold49	subtractBed	intrn	294018	294161	.	-	.	Parent=CGI_10013286;
	scaffold49	WUBlastX	LINE_RTE-BovB	294018	294161	50	+	.	.
scaffold49	subtractBed	intrn	289295	289344	.	+	.	Parent=CGI_10013288;
	scaffold49	TRF	Tandem_Repeat	289295	289344	100	+	.	.
scaffold49	subtractBed	intrn	345510	346197	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	345510	346197	794	+	.	.
scaffold49	subtractBed	intrn	346713	346779	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	346713	346779	89	+	.	.
scaffold49	subtractBed	intrn	347279	347324	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	347279	347324	92	+	.	.
scaffold49	subtractBed	intrn	347348	347380	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	347348	347380	66	+	.	.
scaffold49	subtractBed	intrn	347568	347629	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	347568	347629	124	+	.	.
scaffold49	subtractBed	intrn	349930	350003	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	349930	350003	85	+	.	.
scaffold49	subtractBed	intrn	349930	350003	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	349930	350003	94	+	.	.
scaffold49	subtractBed	intrn	350115	350228	.	+	.	Parent=CGI_10013290;
	scaffold49	TRF	Tandem_Repeat	350115	350228	201	+	.	.
scaffold490	subtractBed	intrn	26236	26283	.	+	.	Parent=CGI_10009160;
	scaffold490	TRF	Tandem_Repeat	26236	26283	96	+	.	.
scaffold490	subtractBed	intrn	54245	54295	.	+	.	Parent=CGI_10009161;
	scaffold490	TRF	Tandem_Repeat	54245	54295	102	+	.	.
scaffold490	subtractBed	intrn	116502	117134	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	DNA_TcMar-Fot1	116502	117134	139	-	.	.
scaffold490	subtractBed	intrn	117032	117196	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	DNA_TcMar-Fot1	117032	117196	61	-	.	.
scaffold490	subtractBed	intrn	116523	116996	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	DNA_TcMar-Fot1	116523	116996	166	-	.	.
scaffold490	subtractBed	intrn	115957	116517	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	DNA_TcMar-Fot1	115957	116517	255	-	.	.
scaffold490	subtractBed	intrn	115708	116517	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	DNA_TcMar-Fot1	115708	116517	207	-	.	.
scaffold490	subtractBed	intrn	115371	115556	.	+	.	Parent=CGI_10009162;
	scaffold490	WUBlastX	LTR_Pao	115371	115556	33	-	.	.
scaffold491	subtractBed	intrn	20712	21191	.	-	.	Parent=CGI_10006648;
	scaffold491	WUBlastX	LTR_Ngaro	20712	21191	166	-	.	.
scaffold491	subtractBed	intrn	45833	46141	.	+	.	Parent=CGI_10006649;
	scaffold491	WUBlastX	LTR_Pao	45833	46468	22	+	.	.
scaffold491	subtractBed	intrn	71737	72488	.	-	.	Parent=CGI_10006653;
	scaffold491	TRF	Tandem_Repeat	71737	72488	1024	+	.	.
scaffold491	subtractBed	intrn	73397	73442	.	-	.	Parent=CGI_10006653;
	scaffold491	TRF	Tandem_Repeat	73397	73442	92	+	.	.
scaffold491	subtractBed	intrn	75744	75773	.	-	.	Parent=CGI_10006653;
	scaffold491	TRF	Tandem_Repeat	75744	75773	51	+	.	.
scaffold491	subtractBed	intrn	77832	78224	.	-	.	Parent=CGI_10006653;
	scaffold491	TRF	Tandem_Repeat	77832	78224	579	+	.	.
scaffold491	subtractBed	intrn	94557	94595	.	+	.	Parent=CGI_10006654;
	scaffold491	TRF	Tandem_Repeat	94557	94595	78	+	.	.
scaffold491	subtractBed	intrn	97194	98088	.	+	.	Parent=CGI_10006654;
	scaffold491	TRF	Tandem_Repeat	97194	98088	1188	+	.	.
scaffold492	subtractBed	intrn	179303	179609	.	-	.	Parent=CGI_10024811;
	scaffold492	TRF	Tandem_Repeat	179302	179609	490	+	.	.
scaffold492	subtractBed	intrn	179837	180724	.	-	.	Parent=CGI_10024811;
	scaffold492	WUBlastX	LINE_L1-Tx1	179837	180724	167	+	.	.
scaffold492	subtractBed	intrn	200615	200658	.	+	.	Parent=CGI_10024813;
	scaffold492	TRF	Tandem_Repeat	200615	200658	52	+	.	.
scaffold492	subtractBed	intrn	201627	202487	.	+	.	Parent=CGI_10024813;
	scaffold492	WUBlastX	DNA_TcMar-Tc1	201627	202487	261	-	.	.
scaffold492	subtractBed	intrn	268288	269298	.	+	.	Parent=CGI_10024818;
	scaffold492	WUBlastX	LINE_L2	268288	269298	264	-	.	.
scaffold492	subtractBed	intrn	268705	269418	.	+	.	Parent=CGI_10024818;
	scaffold492	WUBlastX	LINE_CR1	268705	269418	33	-	.	.
scaffold492	subtractBed	intrn	397081	397153	.	-	.	Parent=CGI_10024832;
	scaffold492	TRF	Tandem_Repeat	397081	397153	146	+	.	.
scaffold492	subtractBed	intrn	397428	397463	.	-	.	Parent=CGI_10024832;
	scaffold492	TRF	Tandem_Repeat	397428	397463	72	+	.	.
scaffold492	subtractBed	intrn	416254	416309	.	-	.	Parent=CGI_10024834;
	scaffold492	TRF	Tandem_Repeat	416254	416309	112	+	.	.
scaffold492	subtractBed	intrn	415783	415995	.	-	.	Parent=CGI_10024834;
	scaffold492	WUBlastX	LINE_L2	415783	415995	56	+	.	.
scaffold492	subtractBed	intrn	432655	432942	.	-	.	Parent=CGI_10024835;
	scaffold492	WUBlastX	LINE_RTE-X	432655	432942	68	+	.	.
scaffold492	subtractBed	intrn	432760	433065	.	-	.	Parent=CGI_10024835;
	scaffold492	WUBlastX	LINE_RTE-X	432760	433065	67	+	.	.
scaffold492	subtractBed	intrn	432745	432942	.	-	.	Parent=CGI_10024835;
	scaffold492	WUBlastX	LINE_RTE-X	432745	432942	77	+	.	.
scaffold492	subtractBed	intrn	442153	442215	.	+	.	Parent=CGI_10024836;
	scaffold492	WUBlastX	LINE_RTE-X	442153	442215	25	+	.	.
scaffold492	subtractBed	intrn	442211	442327	.	+	.	Parent=CGI_10024836;
	scaffold492	WUBlastX	LINE_RTE-X	442211	442327	27	+	.	.
scaffold492	subtractBed	intrn	470921	470981	.	-	.	Parent=CGI_10024838;
	scaffold492	TRF	Tandem_Repeat	470921	470981	95	+	.	.
scaffold492	subtractBed	intrn	471260	471286	.	-	.	Parent=CGI_10024838;
	scaffold492	TRF	Tandem_Repeat	471260	471286	54	+	.	.
scaffold492	subtractBed	intrn	525295	525380	.	+	.	Parent=CGI_10024842;
	scaffold492	TRF	Tandem_Repeat	525295	525380	59	+	.	.
scaffold492	subtractBed	intrn	539321	539386	.	+	.	Parent=CGI_10024844;
	scaffold492	TRF	Tandem_Repeat	539321	539386	132	+	.	.
scaffold492	subtractBed	intrn	612039	612084	.	-	.	Parent=CGI_10024848;
	scaffold492	TRF	Tandem_Repeat	612039	612084	92	+	.	.
scaffold492	subtractBed	intrn	612461	612510	.	-	.	Parent=CGI_10024848;
	scaffold492	TRF	Tandem_Repeat	612461	612510	100	+	.	.
scaffold492	subtractBed	intrn	655955	658098	.	-	.	Parent=CGI_10024852;
	scaffold492	TRF	Tandem_Repeat	655955	658098	3185	+	.	.
scaffold492	subtractBed	intrn	655954	658098	.	-	.	Parent=CGI_10024852;
	scaffold492	TRF	Tandem_Repeat	655954	658098	3166	+	.	.
scaffold492	subtractBed	intrn	683665	684061	.	+	.	Parent=CGI_10024854;
	scaffold492	TRF	Tandem_Repeat	683665	684061	749	+	.	.
scaffold492	subtractBed	intrn	783303	783332	.	+	.	Parent=CGI_10024863;
	scaffold492	TRF	Tandem_Repeat	783303	783332	60	+	.	.
scaffold492	subtractBed	intrn	811710	811757	.	+	.	Parent=CGI_10024866;
	scaffold492	TRF	Tandem_Repeat	811710	811757	96	+	.	.
scaffold492	subtractBed	intrn	819509	819552	.	+	.	Parent=CGI_10024867;
	scaffold492	TRF	Tandem_Repeat	819509	819552	88	+	.	.
scaffold492	subtractBed	intrn	842374	842408	.	+	.	Parent=CGI_10024869;
	scaffold492	TRF	Tandem_Repeat	842374	842408	70	+	.	.
scaffold492	subtractBed	intrn	861476	861650	.	+	.	Parent=CGI_10024870;
	scaffold492	TRF	Tandem_Repeat	861476	861650	136	+	.	.
scaffold492	subtractBed	intrn	868931	869014	.	+	.	Parent=CGI_10024870;
	scaffold492	TRF	Tandem_Repeat	868931	869014	59	+	.	.
scaffold492	subtractBed	intrn	874649	874948	.	+	.	Parent=CGI_10024870;
	scaffold492	WUBlastX	LINE_RTE-X	874649	874948	48	+	.	.
scaffold492	subtractBed	intrn	884502	884735	.	+	.	Parent=CGI_10024872;
	scaffold492	WUBlastX	LINE_L2	884502	884735	44	-	.	.
scaffold492	subtractBed	intrn	884622	884828	.	+	.	Parent=CGI_10024872;
	scaffold492	WUBlastX	LINE_L2	884622	884828	51	-	.	.
scaffold492	subtractBed	intrn	894926	895020	.	+	.	Parent=CGI_10024873;
	scaffold492	TRF	Tandem_Repeat	894926	895020	190	+	.	.
scaffold492	subtractBed	intrn	895655	895790	.	+	.	Parent=CGI_10024873;
	scaffold492	TRF	Tandem_Repeat	895655	895790	191	+	.	.
scaffold492	subtractBed	intrn	895837	895848	.	+	.	Parent=CGI_10024873;
	scaffold492	TRF	Tandem_Repeat	895837	895967	203	+	.	.
scaffold492	subtractBed	intrn	902009	902324	.	+	.	Parent=CGI_10024874;
	scaffold492	TRF	Tandem_Repeat	902009	902324	400	+	.	.
scaffold492	subtractBed	intrn	902009	902324	.	+	.	Parent=CGI_10024874;
	scaffold492	TRF	Tandem_Repeat	902009	902324	377	+	.	.
scaffold492	subtractBed	intrn	959672	959757	.	+	.	Parent=CGI_10024875;
	scaffold492	TRF	Tandem_Repeat	959672	959757	102	+	.	.
scaffold492	subtractBed	intrn	959680	959754	.	+	.	Parent=CGI_10024875;
	scaffold492	TRF	Tandem_Repeat	959680	959754	114	+	.	.
scaffold492	subtractBed	intrn	959672	959757	.	+	.	Parent=CGI_10024875;
	scaffold492	TRF	Tandem_Repeat	959672	959757	129	+	.	.
scaffold492	subtractBed	intrn	959927	961111	.	+	.	Parent=CGI_10024875;
	scaffold492	TRF	Tandem_Repeat	959927	961111	1654	+	.	.
scaffold492	subtractBed	intrn	973414	973491	.	-	.	Parent=CGI_10024876;
	scaffold492	TRF	Tandem_Repeat	973414	973491	99	+	.	.
scaffold492	subtractBed	intrn	974779	974829	.	-	.	Parent=CGI_10024876;
	scaffold492	TRF	Tandem_Repeat	974779	974829	95	+	.	.
scaffold493	subtractBed	intrn	22688	23272	.	+	.	Parent=CGI_10007244;
	scaffold493	TRF	Tandem_Repeat	22688	23272	449	+	.	.
scaffold493	subtractBed	intrn	22688	23272	.	+	.	Parent=CGI_10007244;
	scaffold493	TRF	Tandem_Repeat	22688	23272	644	+	.	.
scaffold493	subtractBed	intrn	22707	23272	.	+	.	Parent=CGI_10007244;
	scaffold493	TRF	Tandem_Repeat	22707	23272	701	+	.	.
scaffold493	subtractBed	intrn	31535	31738	.	-	.	Parent=CGI_10007245;
	scaffold493	TRF	Tandem_Repeat	31535	31738	103	+	.	.
scaffold493	subtractBed	intrn	36214	36402	.	+	.	Parent=CGI_10007246;
	scaffold493	WUBlastX	LINE_RTE-X	36214	36402	34	+	.	.
scaffold493	subtractBed	intrn	36106	36345	.	+	.	Parent=CGI_10007246;
	scaffold493	WUBlastX	LINE_RTE-X	36106	36345	44	+	.	.
scaffold493	subtractBed	intrn	36214	36360	.	+	.	Parent=CGI_10007246;
	scaffold493	WUBlastX	LINE_RTE-X	36214	36360	48	+	.	.
scaffold493	subtractBed	intrn	36208	36336	.	+	.	Parent=CGI_10007246;
	scaffold493	WUBlastX	LINE_RTE-X	36208	36336	79	+	.	.
scaffold493	subtractBed	intrn	62919	62968	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	62919	62968	100	+	.	.
scaffold493	subtractBed	intrn	64043	64090	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	64043	64090	96	+	.	.
scaffold493	subtractBed	intrn	74273	74779	.	+	.	Parent=CGI_10007247;
	scaffold493	WUBlastX	LINE_RTE-X	74273	74779	43	-	.	.
scaffold493	subtractBed	intrn	74384	74767	.	+	.	Parent=CGI_10007247;
	scaffold493	WUBlastX	LINE_RTE-X	74384	74767	67	-	.	.
scaffold493	subtractBed	intrn	79420	79461	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	79420	79461	59	+	.	.
scaffold493	subtractBed	intrn	79631	80477	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	79631	80477	1273	+	.	.
scaffold493	subtractBed	intrn	82969	83106	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	82969	83106	75	+	.	.
scaffold493	subtractBed	intrn	83114	83293	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	83114	83293	148	+	.	.
scaffold493	subtractBed	intrn	96803	96944	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	96803	96944	92	+	.	.
scaffold493	subtractBed	intrn	96948	97130	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	96948	97130	188	+	.	.
scaffold493	subtractBed	intrn	96948	97148	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	96948	97148	154	+	.	.
scaffold493	subtractBed	intrn	100298	100332	.	+	.	Parent=CGI_10007247;
	scaffold493	TRF	Tandem_Repeat	100298	100332	70	+	.	.
scaffold493	subtractBed	intrn	113812	113847	.	+	.	Parent=CGI_10007248;
	scaffold493	TRF	Tandem_Repeat	113812	113847	72	+	.	.
scaffold493	subtractBed	intrn	158591	158965	.	+	.	Parent=CGI_10007250;
	scaffold493	WUBlastX	LINE_L1-Tx1	158591	158965	46	+	.	.
scaffold493	subtractBed	intrn	158597	158860	.	+	.	Parent=CGI_10007250;
	scaffold493	WUBlastX	LINE_L1-Tx1	158597	158860	76	+	.	.
scaffold496	subtractBed	intrn	32279	32323	.	+	.	Parent=CGI_10022432;
	scaffold496	TRF	Tandem_Repeat	32279	32323	90	+	.	.
scaffold496	subtractBed	intrn	191997	192044	.	-	.	Parent=CGI_10022448;
	scaffold496	TRF	Tandem_Repeat	191997	192044	96	+	.	.
scaffold496	subtractBed	intrn	192044	192075	.	-	.	Parent=CGI_10022448;
	scaffold496	TRF	Tandem_Repeat	192044	192075	64	+	.	.
scaffold496	subtractBed	intrn	197554	197589	.	-	.	Parent=CGI_10022448;
	scaffold496	TRF	Tandem_Repeat	197554	197589	72	+	.	.
scaffold496	subtractBed	intrn	204551	204589	.	-	.	Parent=CGI_10022448;
	scaffold496	TRF	Tandem_Repeat	204551	204589	78	+	.	.
scaffold496	subtractBed	intrn	260838	260984	.	-	.	Parent=CGI_10022448;
	scaffold496	TRF	Tandem_Repeat	260838	260984	213	+	.	.
scaffold496	subtractBed	intrn	260838	260984	.	+	.	Parent=CGI_10022449;
	scaffold496	TRF	Tandem_Repeat	260838	260984	213	+	.	.
scaffold496	subtractBed	intrn	276084	276198	.	+	.	Parent=CGI_10022450;
	scaffold496	TRF	Tandem_Repeat	276084	276198	67	+	.	.
scaffold496	subtractBed	intrn	276086	276212	.	+	.	Parent=CGI_10022450;
	scaffold496	TRF	Tandem_Repeat	276086	276212	107	+	.	.
scaffold496	subtractBed	intrn	276102	276217	.	+	.	Parent=CGI_10022450;
	scaffold496	TRF	Tandem_Repeat	276102	276217	223	+	.	.
scaffold496	subtractBed	intrn	279772	279835	.	+	.	Parent=CGI_10022450;
	scaffold496	TRF	Tandem_Repeat	279772	279835	85	+	.	.
scaffold496	subtractBed	intrn	279787	279834	.	+	.	Parent=CGI_10022450;
	scaffold496	TRF	Tandem_Repeat	279787	279834	71	+	.	.
scaffold496	subtractBed	intrn	285454	285987	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	285454	285987	60	+	.	.
scaffold496	subtractBed	intrn	285553	286002	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	285553	286002	94	+	.	.
scaffold496	subtractBed	intrn	286095	286247	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	286095	286247	39	+	.	.
scaffold496	subtractBed	intrn	286253	286963	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	286253	286963	173	-	.	.
scaffold496	subtractBed	intrn	285736	285975	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	285736	285975	135	+	.	.
scaffold496	subtractBed	intrn	285980	286087	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	285980	286087	48	+	.	.
scaffold496	subtractBed	intrn	286119	286403	.	+	.	Parent=CGI_10022451;
	scaffold496	WUBlastX	LTR_Ngaro	286119	286403	73	+	.	.
scaffold496	subtractBed	intrn	292405	292465	.	-	.	Parent=CGI_10022452;
	scaffold496	TRF	Tandem_Repeat	292405	292465	50	+	.	.
scaffold496	subtractBed	intrn	353999	354027	.	+	.	Parent=CGI_10022457;
	scaffold496	TRF	Tandem_Repeat	353999	354027	58	+	.	.
scaffold496	subtractBed	intrn	465013	465969	.	-	.	Parent=CGI_10022459;
	scaffold496	TRF	Tandem_Repeat	465013	465969	1250	+	.	.
scaffold496	subtractBed	intrn	494141	494287	.	+	.	Parent=CGI_10022460;
	scaffold496	TRF	Tandem_Repeat	494141	494287	73	+	.	.
scaffold496	subtractBed	intrn	494203	494332	.	+	.	Parent=CGI_10022460;
	scaffold496	TRF	Tandem_Repeat	494203	494332	93	+	.	.
scaffold496	subtractBed	intrn	509398	509461	.	-	.	Parent=CGI_10022461;
	scaffold496	TRF	Tandem_Repeat	509398	509461	65	+	.	.
scaffold496	subtractBed	intrn	509424	509470	.	-	.	Parent=CGI_10022461;
	scaffold496	TRF	Tandem_Repeat	509424	509470	94	+	.	.
scaffold496	subtractBed	intrn	514173	514229	.	-	.	Parent=CGI_10022461;
	scaffold496	TRF	Tandem_Repeat	514173	514229	105	+	.	.
scaffold496	subtractBed	intrn	652801	652850	.	+	.	Parent=CGI_10022470;
	scaffold496	TRF	Tandem_Repeat	652801	652850	100	+	.	.
scaffold496	subtractBed	intrn	725485	725901	.	-	.	Parent=CGI_10022473;
	scaffold496	WUBlastX	LINE_CR1	725485	725901	77	+	.	.
scaffold496	subtractBed	intrn	725276	725512	.	-	.	Parent=CGI_10022473;
	scaffold496	WUBlastX	LINE_L1-Tx1	725276	725512	69	+	.	.
scaffold498	subtractBed	intrn	117550	117828	.	-	.	Parent=CGI_10012422;
	scaffold498	TRF	Tandem_Repeat	117550	117828	423	+	.	.
scaffold498	subtractBed	intrn	113776	115821	.	-	.	Parent=CGI_10012422;
	scaffold498	WUBlastX	DNA_En-Spm	113776	115821	1029	-	.	.
scaffold498	subtractBed	intrn	113773	115512	.	-	.	Parent=CGI_10012422;
	scaffold498	WUBlastX	DNA_En-Spm	113773	115512	1160	-	.	.
scaffold498	subtractBed	intrn	143318	143367	.	+	.	Parent=CGI_10012426;
	scaffold498	TRF	Tandem_Repeat	143318	143367	100	+	.	.
scaffold498	subtractBed	intrn	144596	144627	.	+	.	Parent=CGI_10012426;
	scaffold498	TRF	Tandem_Repeat	144596	144627	55	+	.	.
scaffold498	subtractBed	intrn	146271	146323	.	+	.	Parent=CGI_10012426;
	scaffold498	TRF	Tandem_Repeat	146271	146323	106	+	.	.
scaffold498	subtractBed	intrn	218824	219512	.	+	.	Parent=CGI_10012429;
	scaffold498	TRF	Tandem_Repeat	218824	219512	647	+	.	.
scaffold498	subtractBed	intrn	218824	219512	.	+	.	Parent=CGI_10012429;
	scaffold498	TRF	Tandem_Repeat	218824	219512	830	+	.	.
scaffold498	subtractBed	intrn	218824	219512	.	+	.	Parent=CGI_10012429;
	scaffold498	TRF	Tandem_Repeat	218824	219512	805	+	.	.
scaffold498	subtractBed	intrn	237182	238243	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	237182	238243	1663	+	.	.
scaffold498	subtractBed	intrn	232594	233475	.	+	.	Parent=CGI_10012431;
	scaffold498	WUBlastX	DNA_Sola	232594	233475	442	-	.	.
scaffold498	subtractBed	intrn	232021	233472	.	+	.	Parent=CGI_10012431;
	scaffold498	WUBlastX	DNA_Sola	232021	233472	432	-	.	.
scaffold498	subtractBed	intrn	246705	247053	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	246705	247053	134	+	.	.
scaffold498	subtractBed	intrn	253688	253745	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	253688	253745	70	+	.	.
scaffold498	subtractBed	intrn	253680	253745	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	253680	253745	114	+	.	.
scaffold498	subtractBed	intrn	253679	253738	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	253679	253738	84	+	.	.
scaffold498	subtractBed	intrn	253769	254563	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	253769	254563	1170	+	.	.
scaffold498	subtractBed	intrn	282787	282812	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	282787	282812	52	+	.	.
scaffold498	subtractBed	intrn	285103	285205	.	+	.	Parent=CGI_10012431;
	scaffold498	TRF	Tandem_Repeat	285103	285205	80	+	.	.
scaffold498	subtractBed	intrn	282787	282812	.	-	.	Parent=CGI_10012432;
	scaffold498	TRF	Tandem_Repeat	282787	282812	52	+	.	.
scaffold498	subtractBed	intrn	285103	285205	.	-	.	Parent=CGI_10012432;
	scaffold498	TRF	Tandem_Repeat	285103	285205	80	+	.	.
scaffold498	subtractBed	intrn	296126	296163	.	+	.	Parent=CGI_10012433;
	scaffold498	TRF	Tandem_Repeat	296126	296163	76	+	.	.
scaffold498	subtractBed	intrn	299250	299304	.	+	.	Parent=CGI_10012433;
	scaffold498	TRF	Tandem_Repeat	299250	299304	110	+	.	.
scaffold499	subtractBed	intrn	25831	26064	.	+	.	Parent=CGI_10015760;
	scaffold499	WUBlastX	LTR_Ngaro	25831	26064	144	+	.	.
scaffold499	subtractBed	intrn	25613	25813	.	+	.	Parent=CGI_10015760;
	scaffold499	WUBlastX	LTR_Ngaro	25613	25813	109	+	.	.
scaffold499	subtractBed	intrn	25568	25816	.	+	.	Parent=CGI_10015760;
	scaffold499	WUBlastX	LTR_Ngaro	25568	25816	85	+	.	.
scaffold499	subtractBed	intrn	52160	52364	.	+	.	Parent=CGI_10015761;
	scaffold499	TRF	Tandem_Repeat	52160	52364	347	+	.	.
scaffold499	subtractBed	intrn	59373	61622	.	+	.	Parent=CGI_10015761;
	scaffold499	TRF	Tandem_Repeat	59373	61622	2473	+	.	.
scaffold499	subtractBed	intrn	94541	94607	.	+	.	Parent=CGI_10015763;
	scaffold499	TRF	Tandem_Repeat	94541	94607	134	+	.	.
scaffold499	subtractBed	intrn	101065	101967	.	+	.	Parent=CGI_10015763;
	scaffold499	WUBlastX	LINE_Proto2	101065	101967	82	-	.	.
scaffold499	subtractBed	intrn	101065	102165	.	+	.	Parent=CGI_10015763;
	scaffold499	WUBlastX	LINE_L2-Hydra	101065	102165	26	-	.	.
scaffold499	subtractBed	intrn	111477	111516	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	111477	111516	62	+	.	.
scaffold499	subtractBed	intrn	114306	114339	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	114306	114339	59	+	.	.
scaffold499	subtractBed	intrn	124577	124838	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	124577	124838	317	+	.	.
scaffold499	subtractBed	intrn	124864	124905	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	124864	124905	84	+	.	.
scaffold499	subtractBed	intrn	126131	126414	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	126131	126414	360	+	.	.
scaffold499	subtractBed	intrn	126131	126415	.	+	.	Parent=CGI_10015764;
	scaffold499	TRF	Tandem_Repeat	126131	126415	322	+	.	.
scaffold499	subtractBed	intrn	145367	145424	.	+	.	Parent=CGI_10015765;
	scaffold499	TRF	Tandem_Repeat	145367	145424	109	+	.	.
scaffold499	subtractBed	intrn	146068	146113	.	+	.	Parent=CGI_10015765;
	scaffold499	TRF	Tandem_Repeat	146068	146113	83	+	.	.
scaffold499	subtractBed	intrn	153696	153733	.	+	.	Parent=CGI_10015765;
	scaffold499	TRF	Tandem_Repeat	153696	153733	76	+	.	.
scaffold499	subtractBed	intrn	224007	224037	.	-	.	Parent=CGI_10015766;
	scaffold499	TRF	Tandem_Repeat	224007	224037	53	+	.	.
scaffold499	subtractBed	intrn	224031	224064	.	-	.	Parent=CGI_10015766;
	scaffold499	TRF	Tandem_Repeat	224031	224064	59	+	.	.
scaffold499	subtractBed	intrn	251494	252399	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	251494	252399	608	+	.	.
scaffold499	subtractBed	intrn	252393	253277	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	252393	253277	513	+	.	.
scaffold499	subtractBed	intrn	251259	251483	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	251259	251483	48	+	.	.
scaffold499	subtractBed	intrn	253142	253309	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	253142	253309	81	+	.	.
scaffold499	subtractBed	intrn	250678	251067	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	250678	251067	93	+	.	.
scaffold499	subtractBed	intrn	251392	252036	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_Gypsy	251392	252036	80	+	.	.
scaffold499	subtractBed	intrn	250189	251064	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	250189	251064	89	+	.	.
scaffold499	subtractBed	intrn	251150	251269	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_Gypsy	251150	251269	23	+	.	.
scaffold499	subtractBed	intrn	250489	251067	.	-	.	Parent=CGI_10015767;
	scaffold499	WUBlastX	LTR_DIRS	250489	251067	90	+	.	.
scaffold499	subtractBed	intrn	277441	277497	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	277441	277497	107	+	.	.
scaffold499	subtractBed	intrn	290616	290706	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	290616	290706	103	+	.	.
scaffold499	subtractBed	intrn	290945	290991	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	290945	290991	76	+	.	.
scaffold499	subtractBed	intrn	291074	291098	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	291074	291098	50	+	.	.
scaffold499	subtractBed	intrn	291857	291885	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	291857	291885	58	+	.	.
scaffold499	subtractBed	intrn	291965	292003	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	291965	292003	78	+	.	.
scaffold499	subtractBed	intrn	292238	292357	.	-	.	Parent=CGI_10015769;
	scaffold499	TRF	Tandem_Repeat	292238	292357	118	+	.	.
scaffold499	subtractBed	intrn	350863	351253	.	-	.	Parent=CGI_10015773;
	scaffold499	TRF	Tandem_Repeat	350863	351253	437	+	.	.
scaffold499	subtractBed	intrn	352354	352383	.	-	.	Parent=CGI_10015773;
	scaffold499	TRF	Tandem_Repeat	352354	352383	60	+	.	.
scaffold499	subtractBed	intrn	374660	374709	.	-	.	Parent=CGI_10015774;
	scaffold499	TRF	Tandem_Repeat	374660	374709	84	+	.	.
scaffold499	subtractBed	intrn	418968	419013	.	-	.	Parent=CGI_10015778;
	scaffold499	TRF	Tandem_Repeat	418968	419013	83	+	.	.
scaffold5	subtractBed	intrn	45244	45286	.	+	.	Parent=CGI_10012924;
	scaffold5	TRF	Tandem_Repeat	45244	45286	86	+	.	.
scaffold5	subtractBed	intrn	47579	48385	.	+	.	Parent=CGI_10012924;
	scaffold5	WUBlastX	LTR_DIRS	47579	48385	443	+	.	.
scaffold5	subtractBed	intrn	48399	49257	.	+	.	Parent=CGI_10012924;
	scaffold5	WUBlastX	LTR_DIRS	48399	49421	834	+	.	.
scaffold5	subtractBed	intrn	47579	48385	.	-	.	Parent=CGI_10012925;
	scaffold5	WUBlastX	LTR_DIRS	47579	48385	443	+	.	.
scaffold5	subtractBed	intrn	48399	49257	.	-	.	Parent=CGI_10012925;
	scaffold5	WUBlastX	LTR_DIRS	48399	49421	834	+	.	.
scaffold5	subtractBed	intrn	50970	51717	.	-	.	Parent=CGI_10012925;
	scaffold5	TRF	Tandem_Repeat	50970	51717	656	+	.	.
scaffold5	subtractBed	intrn	58069	58096	.	-	.	Parent=CGI_10012925;
	scaffold5	TRF	Tandem_Repeat	58069	58096	56	+	.	.
scaffold5	subtractBed	intrn	62418	62666	.	-	.	Parent=CGI_10012925;
	scaffold5	WUBlastX	LINE_RTE-X	62418	62666	84	+	.	.
scaffold5	subtractBed	intrn	246759	246811	.	+	.	Parent=CGI_10012930;
	scaffold5	TRF	Tandem_Repeat	246759	246811	72	+	.	.
scaffold5	subtractBed	intrn	252490	252527	.	+	.	Parent=CGI_10012931;
	scaffold5	TRF	Tandem_Repeat	252490	252527	76	+	.	.
scaffold5	subtractBed	intrn	255077	255776	.	+	.	Parent=CGI_10012931;
	scaffold5	TRF	Tandem_Repeat	255077	255776	616	+	.	.
scaffold5	subtractBed	intrn	278628	278681	.	+	.	Parent=CGI_10012934;
	scaffold5	TRF	Tandem_Repeat	278628	278681	74	+	.	.
scaffold5	subtractBed	intrn	324780	324849	.	-	.	Parent=CGI_10012936;
	scaffold5	TRF	Tandem_Repeat	324780	324849	104	+	.	.
scaffold5	subtractBed	intrn	324783	324857	.	-	.	Parent=CGI_10012936;
	scaffold5	TRF	Tandem_Repeat	324783	324857	89	+	.	.
scaffold50	subtractBed	intrn	50833	50916	.	+	.	Parent=CGI_10009092;
	scaffold50	TRF	Tandem_Repeat	50833	50916	145	+	.	.
scaffold50	subtractBed	intrn	78641	78697	.	+	.	Parent=CGI_10009093;
	scaffold50	TRF	Tandem_Repeat	78641	78697	107	+	.	.
scaffold50	subtractBed	intrn	81125	81157	.	+	.	Parent=CGI_10009093;
	scaffold50	TRF	Tandem_Repeat	81125	81157	57	+	.	.
scaffold50	subtractBed	intrn	88708	88754	.	-	.	Parent=CGI_10009094;
	scaffold50	TRF	Tandem_Repeat	88708	88754	76	+	.	.
scaffold50	subtractBed	intrn	93817	93854	.	-	.	Parent=CGI_10009096;
	scaffold50	TRF	Tandem_Repeat	93817	93854	76	+	.	.
scaffold500	subtractBed	intrn	29872	30228	.	-	.	Parent=CGI_10008712;
	scaffold500	TRF	Tandem_Repeat	29872	30228	210	+	.	.
scaffold500	subtractBed	intrn	30854	31051	.	-	.	Parent=CGI_10008712;
	scaffold500	TRF	Tandem_Repeat	30854	31051	351	+	.	.
scaffold500	subtractBed	intrn	44788	44819	.	+	.	Parent=CGI_10008713;
	scaffold500	TRF	Tandem_Repeat	44788	44819	55	+	.	.
scaffold500	subtractBed	intrn	77849	78039	.	+	.	Parent=CGI_10008715;
	scaffold500	TRF	Tandem_Repeat	77849	78039	142	+	.	.
scaffold500	subtractBed	intrn	155086	155160	.	-	.	Parent=CGI_10008718;
	scaffold500	TRF	Tandem_Repeat	155086	155160	123	+	.	.
scaffold500	subtractBed	intrn	214751	214806	.	-	.	Parent=CGI_10008722;
	scaffold500	TRF	Tandem_Repeat	214751	214806	105	+	.	.
scaffold501	subtractBed	intrn	114027	114060	.	-	.	Parent=CGI_10027499;
	scaffold501	TRF	Tandem_Repeat	114027	114060	68	+	.	.
scaffold501	subtractBed	intrn	151286	151338	.	+	.	Parent=CGI_10027501;
	scaffold501	TRF	Tandem_Repeat	151286	151338	106	+	.	.
scaffold501	subtractBed	intrn	170082	170174	.	-	.	Parent=CGI_10027502;
	scaffold501	WUBlastX	LTR_Gypsy	169921	170355	21	-	.	.
scaffold501	subtractBed	intrn	170351	170355	.	-	.	Parent=CGI_10027502;
	scaffold501	WUBlastX	LTR_Gypsy	169921	170355	21	-	.	.
scaffold501	subtractBed	intrn	258200	258250	.	+	.	Parent=CGI_10027510;
	scaffold501	TRF	Tandem_Repeat	258200	258250	57	+	.	.
scaffold501	subtractBed	intrn	265017	265041	.	+	.	Parent=CGI_10027510;
	scaffold501	TRF	Tandem_Repeat	265017	265041	50	+	.	.
scaffold501	subtractBed	intrn	381630	381668	.	-	.	Parent=CGI_10027519;
	scaffold501	TRF	Tandem_Repeat	381630	381668	78	+	.	.
scaffold501	subtractBed	intrn	411725	411790	.	-	.	Parent=CGI_10027521;
	scaffold501	TRF	Tandem_Repeat	411725	411790	125	+	.	.
scaffold501	subtractBed	intrn	415259	415317	.	-	.	Parent=CGI_10027521;
	scaffold501	TRF	Tandem_Repeat	415259	415317	118	+	.	.
scaffold501	subtractBed	intrn	427830	427858	.	-	.	Parent=CGI_10027521;
	scaffold501	TRF	Tandem_Repeat	427830	427858	51	+	.	.
scaffold501	subtractBed	intrn	575934	576013	.	-	.	Parent=CGI_10027527;
	scaffold501	TRF	Tandem_Repeat	575934	576013	61	+	.	.
scaffold501	subtractBed	intrn	579220	579473	.	-	.	Parent=CGI_10027527;
	scaffold501	TRF	Tandem_Repeat	579220	579473	402	+	.	.
scaffold501	subtractBed	intrn	639639	640306	.	+	.	Parent=CGI_10027528;
	scaffold501	TRF	Tandem_Repeat	639639	640306	1158	+	.	.
scaffold501	subtractBed	intrn	651700	651769	.	+	.	Parent=CGI_10027528;
	scaffold501	TRF	Tandem_Repeat	651700	651769	131	+	.	.
scaffold501	subtractBed	intrn	658380	658431	.	+	.	Parent=CGI_10027528;
	scaffold501	TRF	Tandem_Repeat	658380	658431	95	+	.	.
scaffold501	subtractBed	intrn	661684	661742	.	+	.	Parent=CGI_10027528;
	scaffold501	TRF	Tandem_Repeat	661684	661742	102	+	.	.
scaffold501	subtractBed	intrn	692296	692353	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	692296	692353	73	+	.	.
scaffold501	subtractBed	intrn	711137	711942	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	711137	711942	1207	+	.	.
scaffold501	subtractBed	intrn	712147	712191	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	712147	712191	72	+	.	.
scaffold501	subtractBed	intrn	721086	721134	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	721086	721134	98	+	.	.
scaffold501	subtractBed	intrn	722665	722692	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	722665	722692	56	+	.	.
scaffold501	subtractBed	intrn	724428	726179	.	-	.	Parent=CGI_10027530;
	scaffold501	WUBlastX	LTR_Gypsy-Cigr	724428	726179	868	+	.	.
scaffold501	subtractBed	intrn	724362	724787	.	-	.	Parent=CGI_10027530;
	scaffold501	WUBlastX	LTR_Gypsy	724362	724787	47	+	.	.
scaffold501	subtractBed	intrn	725199	726368	.	-	.	Parent=CGI_10027530;
	scaffold501	WUBlastX	LTR_Gypsy	725199	726368	463	+	.	.
scaffold501	subtractBed	intrn	735874	735916	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	735874	735916	86	+	.	.
scaffold501	subtractBed	intrn	739754	740713	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	739754	740713	1423	+	.	.
scaffold501	subtractBed	intrn	740744	740799	.	-	.	Parent=CGI_10027530;
	scaffold501	TRF	Tandem_Repeat	740744	740799	76	+	.	.
scaffold501	subtractBed	intrn	790934	792328	.	+	.	Parent=CGI_10027531;
	scaffold501	WUBlastX	LINE_RTE-X	790934	792328	607	-	.	.
scaffold501	subtractBed	intrn	792179	792391	.	+	.	Parent=CGI_10027531;
	scaffold501	WUBlastX	LINE_CR1	792179	792391	29	-	.	.
scaffold501	subtractBed	intrn	794846	795074	.	+	.	Parent=CGI_10027531;
	scaffold501	TRF	Tandem_Repeat	794846	795074	347	+	.	.
scaffold501	subtractBed	intrn	797886	797981	.	+	.	Parent=CGI_10027531;
	scaffold501	TRF	Tandem_Repeat	797886	797981	147	+	.	.
scaffold501	subtractBed	intrn	805452	805611	.	+	.	Parent=CGI_10027531;
	scaffold501	TRF	Tandem_Repeat	805452	805611	212	+	.	.
scaffold501	subtractBed	intrn	866251	867348	.	+	.	Parent=CGI_10027533;
	scaffold501	WUBlastX	LINE_RTE-X	866251	867348	350	+	.	.
scaffold501	subtractBed	intrn	972689	972746	.	+	.	Parent=CGI_10027539;
	scaffold501	TRF	Tandem_Repeat	972689	972746	57	+	.	.
scaffold501	subtractBed	intrn	1064730	1064948	.	+	.	Parent=CGI_10027541;
	scaffold501	TRF	Tandem_Repeat	1064730	1064948	258	+	.	.
scaffold501	subtractBed	intrn	1064681	1065092	.	+	.	Parent=CGI_10027541;
	scaffold501	TRF	Tandem_Repeat	1064681	1065092	401	+	.	.
scaffold501	subtractBed	intrn	1064681	1065092	.	+	.	Parent=CGI_10027541;
	scaffold501	TRF	Tandem_Repeat	1064681	1065092	429	+	.	.
scaffold501	subtractBed	intrn	1064690	1065092	.	+	.	Parent=CGI_10027541;
	scaffold501	TRF	Tandem_Repeat	1064690	1065092	425	+	.	.
scaffold501	subtractBed	intrn	1136669	1137073	.	-	.	Parent=CGI_10027545;
	scaffold501	WUBlastX	LINE_Penelope	1136669	1137073	32	+	.	.
scaffold501	subtractBed	intrn	1136747	1137046	.	-	.	Parent=CGI_10027545;
	scaffold501	WUBlastX	LINE_Penelope	1136747	1137046	38	+	.	.
scaffold501	subtractBed	intrn	1137013	1137153	.	-	.	Parent=CGI_10027545;
	scaffold501	WUBlastX	LINE_Penelope	1137013	1137153	35	+	.	.
scaffold501	subtractBed	intrn	1137767	1137822	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1137767	1137822	76	+	.	.
scaffold501	subtractBed	intrn	1140859	1140891	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1140859	1140891	66	+	.	.
scaffold501	subtractBed	intrn	1165682	1166803	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1165682	1166803	1456	+	.	.
scaffold501	subtractBed	intrn	1172796	1172838	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1172796	1172838	86	+	.	.
scaffold501	subtractBed	intrn	1174967	1175678	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1174967	1175678	940	+	.	.
scaffold501	subtractBed	intrn	1174990	1175678	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1174990	1175678	908	+	.	.
scaffold501	subtractBed	intrn	1185847	1185934	.	-	.	Parent=CGI_10027545;
	scaffold501	TRF	Tandem_Repeat	1185847	1185934	122	+	.	.
scaffold501	subtractBed	intrn	1211117	1211278	.	+	.	Parent=CGI_10027546;
	scaffold501	WUBlastX	LINE_CR1-L2	1211117	1211278	45	+	.	.
scaffold501	subtractBed	intrn	1210962	1211111	.	+	.	Parent=CGI_10027546;
	scaffold501	WUBlastX	LINE_L2	1210962	1211111	86	+	.	.
scaffold502	subtractBed	intrn	4620	5363	.	+	.	Parent=CGI_10024310;
	scaffold502	TRF	Tandem_Repeat	4620	5363	754	+	.	.
scaffold502	subtractBed	intrn	10455	10516	.	+	.	Parent=CGI_10024311;
	scaffold502	TRF	Tandem_Repeat	10455	10516	63	+	.	.
scaffold502	subtractBed	intrn	19554	19617	.	+	.	Parent=CGI_10024311;
	scaffold502	TRF	Tandem_Repeat	19554	19617	119	+	.	.
scaffold502	subtractBed	intrn	69163	69199	.	+	.	Parent=CGI_10024313;
	scaffold502	TRF	Tandem_Repeat	69163	69199	56	+	.	.
scaffold502	subtractBed	intrn	73534	73836	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	73534	73836	23	-	.	.
scaffold502	subtractBed	intrn	73582	73830	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	73582	73830	62	-	.	.
scaffold502	subtractBed	intrn	73582	73859	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	73582	73884	31	-	.	.
scaffold502	subtractBed	intrn	74765	75895	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1	74765	75895	269	+	.	.
scaffold502	subtractBed	intrn	75879	76517	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1	75879	76517	228	+	.	.
scaffold502	subtractBed	intrn	74373	74756	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	74373	74756	250	+	.	.
scaffold502	subtractBed	intrn	74762	75472	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	74762	75472	340	+	.	.
scaffold502	subtractBed	intrn	75777	76385	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	75777	76385	320	+	.	.
scaffold502	subtractBed	intrn	77315	77977	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1-Tx1	77315	77977	282	+	.	.
scaffold502	subtractBed	intrn	76587	76643	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1	76587	76643	23	+	.	.
scaffold502	subtractBed	intrn	79229	79708	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LTR_Ngaro	79229	79708	258	-	.	.
scaffold502	subtractBed	intrn	77240	78034	.	+	.	Parent=CGI_10024313;
	scaffold502	WUBlastX	LINE_L1	77240	78034	29	+	.	.
scaffold502	subtractBed	intrn	266983	267091	.	+	.	Parent=CGI_10024318;
	scaffold502	TRF	Tandem_Repeat	266983	267091	74	+	.	.
scaffold502	subtractBed	intrn	279315	280328	.	+	.	Parent=CGI_10024318;
	scaffold502	WUBlastX	LINE_Penelope	279315	280328	26	-	.	.
scaffold502	subtractBed	intrn	280349	280522	.	+	.	Parent=CGI_10024318;
	scaffold502	WUBlastX	LINE_Penelope	280349	280522	28	-	.	.
scaffold502	subtractBed	intrn	280391	280528	.	+	.	Parent=CGI_10024318;
	scaffold502	WUBlastX	LINE_Penelope	280391	280528	33	-	.	.
scaffold502	subtractBed	intrn	280394	280507	.	+	.	Parent=CGI_10024318;
	scaffold502	WUBlastX	LINE_Penelope	280394	280507	47	-	.	.
scaffold502	subtractBed	intrn	279831	280037	.	+	.	Parent=CGI_10024318;
	scaffold502	WUBlastX	LINE_Penelope	279831	280037	47	-	.	.
scaffold502	subtractBed	intrn	285363	285665	.	+	.	Parent=CGI_10024318;
	scaffold502	TRF	Tandem_Repeat	285363	285665	371	+	.	.
scaffold502	subtractBed	intrn	285393	285667	.	+	.	Parent=CGI_10024318;
	scaffold502	TRF	Tandem_Repeat	285393	285667	316	+	.	.
scaffold502	subtractBed	intrn	285361	285665	.	+	.	Parent=CGI_10024318;
	scaffold502	TRF	Tandem_Repeat	285361	285665	369	+	.	.
scaffold502	subtractBed	intrn	291050	291210	.	+	.	Parent=CGI_10024318;
	scaffold502	TRF	Tandem_Repeat	291050	291210	216	+	.	.
scaffold502	subtractBed	intrn	323841	323890	.	+	.	Parent=CGI_10024322;
	scaffold502	TRF	Tandem_Repeat	323841	323890	100	+	.	.
scaffold502	subtractBed	intrn	339435	339502	.	-	.	Parent=CGI_10024324;
	scaffold502	TRF	Tandem_Repeat	339435	339502	136	+	.	.
scaffold502	subtractBed	intrn	342147	342580	.	-	.	Parent=CGI_10024324;
	scaffold502	TRF	Tandem_Repeat	342147	342580	429	+	.	.
scaffold502	subtractBed	intrn	367520	367553	.	-	.	Parent=CGI_10024326;
	scaffold502	TRF	Tandem_Repeat	367520	367553	50	+	.	.
scaffold502	subtractBed	intrn	370883	370921	.	-	.	Parent=CGI_10024327;
	scaffold502	TRF	Tandem_Repeat	370883	370921	53	+	.	.
scaffold502	subtractBed	intrn	373775	373897	.	-	.	Parent=CGI_10024327;
	scaffold502	TRF	Tandem_Repeat	373775	373897	90	+	.	.
scaffold502	subtractBed	intrn	373896	374077	.	-	.	Parent=CGI_10024327;
	scaffold502	TRF	Tandem_Repeat	373896	374077	152	+	.	.
scaffold502	subtractBed	intrn	374699	374743	.	-	.	Parent=CGI_10024327;
	scaffold502	TRF	Tandem_Repeat	374699	374743	81	+	.	.
scaffold502	subtractBed	intrn	514533	514602	.	-	.	Parent=CGI_10024331;
	scaffold502	TRF	Tandem_Repeat	514533	514602	122	+	.	.
scaffold502	subtractBed	intrn	566608	567257	.	-	.	Parent=CGI_10024335;
	scaffold502	TRF	Tandem_Repeat	566608	567257	924	+	.	.
scaffold502	subtractBed	intrn	567955	568225	.	-	.	Parent=CGI_10024335;
	scaffold502	TRF	Tandem_Repeat	567955	568225	431	+	.	.
scaffold502	subtractBed	intrn	574765	574986	.	-	.	Parent=CGI_10024335;
	scaffold502	WUBlastX	LINE_RTE-X	574765	574986	57	+	.	.
scaffold502	subtractBed	intrn	574765	574986	.	+	.	Parent=CGI_10024336;
	scaffold502	WUBlastX	LINE_RTE-X	574765	574986	57	+	.	.
scaffold502	subtractBed	intrn	579479	580166	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	579479	580166	695	+	.	.
scaffold502	subtractBed	intrn	580658	581107	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	580658	581107	657	+	.	.
scaffold502	subtractBed	intrn	583634	583765	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	583634	583765	201	+	.	.
scaffold502	subtractBed	intrn	583732	584100	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	583732	584100	421	+	.	.
scaffold502	subtractBed	intrn	583636	584077	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	583636	584077	501	+	.	.
scaffold502	subtractBed	intrn	587360	588370	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	587360	588370	945	+	.	.
scaffold502	subtractBed	intrn	590355	590554	.	+	.	Parent=CGI_10024336;
	scaffold502	TRF	Tandem_Repeat	590355	590554	391	+	.	.
scaffold502	subtractBed	intrn	617821	617864	.	+	.	Parent=CGI_10024338;
	scaffold502	TRF	Tandem_Repeat	617821	617864	88	+	.	.
scaffold502	subtractBed	intrn	625286	625795	.	+	.	Parent=CGI_10024338;
	scaffold502	WUBlastX	LINE_CR1	625286	625795	124	-	.	.
scaffold502	subtractBed	intrn	624950	625684	.	+	.	Parent=CGI_10024338;
	scaffold502	WUBlastX	LINE_CR1	624950	625684	468	-	.	.
scaffold502	subtractBed	intrn	641213	642681	.	-	.	Parent=CGI_10024339;
	scaffold502	TRF	Tandem_Repeat	641213	642681	1530	+	.	.
scaffold502	subtractBed	intrn	641901	642124	.	-	.	Parent=CGI_10024339;
	scaffold502	TRF	Tandem_Repeat	641901	642124	211	+	.	.
scaffold502	subtractBed	intrn	679452	679496	.	-	.	Parent=CGI_10024340;
	scaffold502	TRF	Tandem_Repeat	679452	679496	90	+	.	.
scaffold502	subtractBed	intrn	694652	694695	.	+	.	Parent=CGI_10024342;
	scaffold502	TRF	Tandem_Repeat	694652	694695	70	+	.	.
scaffold502	subtractBed	intrn	694653	694691	.	+	.	Parent=CGI_10024342;
	scaffold502	TRF	Tandem_Repeat	694653	694691	60	+	.	.
scaffold502	subtractBed	intrn	713575	714573	.	+	.	Parent=CGI_10024345;
	scaffold502	TRF	Tandem_Repeat	713575	714573	1005	+	.	.
scaffold502	subtractBed	intrn	780176	780206	.	+	.	Parent=CGI_10024346;
	scaffold502	TRF	Tandem_Repeat	780176	780206	53	+	.	.
scaffold502	subtractBed	intrn	790770	791084	.	+	.	Parent=CGI_10024346;
	scaffold502	WUBlastX	LINE_Penelope	790770	791084	52	-	.	.
scaffold502	subtractBed	intrn	797610	798503	.	+	.	Parent=CGI_10024346;
	scaffold502	WUBlastX	LTR_Ngaro	797610	798503	202	-	.	.
scaffold502	subtractBed	intrn	824187	824394	.	-	.	Parent=CGI_10024347;
	scaffold502	TRF	Tandem_Repeat	824187	824394	285	+	.	.
scaffold502	subtractBed	intrn	832204	832364	.	-	.	Parent=CGI_10024347;
	scaffold502	TRF	Tandem_Repeat	832204	832364	69	+	.	.
scaffold503	subtractBed	intrn	81613	82444	.	+	.	Parent=CGI_10006762;
	scaffold503	TRF	Tandem_Repeat	81613	82444	985	+	.	.
scaffold503	subtractBed	intrn	155719	155887	.	+	.	Parent=CGI_10006766;
	scaffold503	TRF	Tandem_Repeat	155719	155887	162	+	.	.
scaffold504	subtractBed	intrn	6656	7234	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6656	7234	86	+	.	.
scaffold504	subtractBed	intrn	6578	7054	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6578	7054	141	+	.	.
scaffold504	subtractBed	intrn	6545	7147	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6545	7147	125	+	.	.
scaffold504	subtractBed	intrn	6346	6660	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6346	6660	73	+	.	.
scaffold504	subtractBed	intrn	6656	7048	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6656	7048	295	+	.	.
scaffold504	subtractBed	intrn	6120	6248	.	-	.	Parent=CGI_10016012;
	scaffold504	WUBlastX	LTR_Gypsy	6120	6248	20	+	.	.
scaffold504	subtractBed	intrn	18696	18729	.	+	.	Parent=CGI_10016013;
	scaffold504	TRF	Tandem_Repeat	18696	18729	68	+	.	.
scaffold504	subtractBed	intrn	18696	18729	.	-	.	Parent=CGI_10016014;
	scaffold504	TRF	Tandem_Repeat	18696	18729	68	+	.	.
scaffold504	subtractBed	intrn	56078	56341	.	-	.	Parent=CGI_10016016;
	scaffold504	WUBlastX	LINE_Penelope	56078	56341	47	-	.	.
scaffold504	subtractBed	intrn	66006	66076	.	-	.	Parent=CGI_10016016;
	scaffold504	TRF	Tandem_Repeat	66006	66076	135	+	.	.
scaffold504	subtractBed	intrn	66679	66838	.	-	.	Parent=CGI_10016016;
	scaffold504	TRF	Tandem_Repeat	66679	66838	241	+	.	.
scaffold504	subtractBed	intrn	83195	83265	.	+	.	Parent=CGI_10016017;
	scaffold504	TRF	Tandem_Repeat	83195	83265	97	+	.	.
scaffold504	subtractBed	intrn	84192	84255	.	+	.	Parent=CGI_10016017;
	scaffold504	TRF	Tandem_Repeat	84192	84255	83	+	.	.
scaffold504	subtractBed	intrn	102582	102803	.	+	.	Parent=CGI_10016017;
	scaffold504	TRF	Tandem_Repeat	102582	102803	243	+	.	.
scaffold504	subtractBed	intrn	113673	114935	.	-	.	Parent=CGI_10016018;
	scaffold504	WUBlastX	LINE_RTE-X	113673	114935	393	+	.	.
scaffold504	subtractBed	intrn	113463	114929	.	-	.	Parent=CGI_10016018;
	scaffold504	WUBlastX	LINE_RTE-X	113379	114929	329	+	.	.
scaffold504	subtractBed	intrn	125170	125265	.	+	.	Parent=CGI_10016019;
	scaffold504	TRF	Tandem_Repeat	125170	125265	93	+	.	.
scaffold504	subtractBed	intrn	125209	125316	.	+	.	Parent=CGI_10016019;
	scaffold504	TRF	Tandem_Repeat	125209	125316	100	+	.	.
scaffold504	subtractBed	intrn	125192	125330	.	+	.	Parent=CGI_10016019;
	scaffold504	TRF	Tandem_Repeat	125192	125330	94	+	.	.
scaffold504	subtractBed	intrn	177047	177403	.	-	.	Parent=CGI_10016023;
	scaffold504	WUBlastX	LINE_L2	177047	177403	103	-	.	.
scaffold504	subtractBed	intrn	177381	177569	.	-	.	Parent=CGI_10016023;
	scaffold504	WUBlastX	LINE_L2	177381	177569	36	-	.	.
scaffold504	subtractBed	intrn	177586	177873	.	-	.	Parent=CGI_10016023;
	scaffold504	WUBlastX	LINE_L2	177586	177873	82	-	.	.
scaffold504	subtractBed	intrn	177574	177912	.	-	.	Parent=CGI_10016023;
	scaffold504	WUBlastX	LINE_L2	177574	177912	42	-	.	.
scaffold504	subtractBed	intrn	194496	194524	.	-	.	Parent=CGI_10016025;
	scaffold504	TRF	Tandem_Repeat	194496	194524	51	+	.	.
scaffold504	subtractBed	intrn	196993	197097	.	-	.	Parent=CGI_10016025;
	scaffold504	TRF	Tandem_Repeat	196993	197097	183	+	.	.
scaffold504	subtractBed	intrn	213400	213514	.	+	.	Parent=CGI_10016026;
	scaffold504	TRF	Tandem_Repeat	213400	213514	178	+	.	.
scaffold504	subtractBed	intrn	233662	233715	.	-	.	Parent=CGI_10016027;
	scaffold504	TRF	Tandem_Repeat	233662	233715	101	+	.	.
scaffold504	subtractBed	intrn	235906	236277	.	-	.	Parent=CGI_10016027;
	scaffold504	WUBlastX	LINE_RTE-X	235906	236277	100	-	.	.
scaffold504	subtractBed	intrn	236032	236535	.	-	.	Parent=CGI_10016027;
	scaffold504	WUBlastX	LINE_RTE-X	236032	236535	220	-	.	.
scaffold504	subtractBed	intrn	235975	236343	.	-	.	Parent=CGI_10016027;
	scaffold504	WUBlastX	LINE_RTE-X	235975	236343	106	-	.	.
scaffold504	subtractBed	intrn	249162	249523	.	+	.	Parent=CGI_10016028;
	scaffold504	TRF	Tandem_Repeat	249144	249523	460	+	.	.
scaffold504	subtractBed	intrn	254276	254449	.	+	.	Parent=CGI_10016028;
	scaffold504	WUBlastX	LINE_L1	254276	254449	23	-	.	.
scaffold504	subtractBed	intrn	253968	254294	.	+	.	Parent=CGI_10016028;
	scaffold504	WUBlastX	LINE_L2	253968	254294	91	-	.	.
scaffold504	subtractBed	intrn	254354	256138	.	+	.	Parent=CGI_10016028;
	scaffold504	WUBlastX	LINE_L2	254354	256138	1108	-	.	.
scaffold504	subtractBed	intrn	320125	320153	.	-	.	Parent=CGI_10016032;
	scaffold504	TRF	Tandem_Repeat	320125	320153	58	+	.	.
scaffold504	subtractBed	intrn	327076	327129	.	+	.	Parent=CGI_10016034;
	scaffold504	TRF	Tandem_Repeat	327076	327129	74	+	.	.
scaffold504	subtractBed	intrn	328551	329766	.	+	.	Parent=CGI_10016034;
	scaffold504	TRF	Tandem_Repeat	328551	329766	1535	+	.	.
scaffold504	subtractBed	intrn	335221	335268	.	+	.	Parent=CGI_10016034;
	scaffold504	TRF	Tandem_Repeat	335221	335268	89	+	.	.
scaffold506	subtractBed	intrn	12586	12771	.	-	.	Parent=CGI_10019249;
	scaffold506	TRF	Tandem_Repeat	12586	12771	90	+	.	.
scaffold506	subtractBed	intrn	15463	15570	.	-	.	Parent=CGI_10019249;
	scaffold506	TRF	Tandem_Repeat	15463	15570	81	+	.	.
scaffold506	subtractBed	intrn	15516	15596	.	-	.	Parent=CGI_10019249;
	scaffold506	TRF	Tandem_Repeat	15516	15596	63	+	.	.
scaffold506	subtractBed	intrn	19382	19442	.	-	.	Parent=CGI_10019249;
	scaffold506	TRF	Tandem_Repeat	19382	19442	122	+	.	.
scaffold506	subtractBed	intrn	25100	25155	.	-	.	Parent=CGI_10019250;
	scaffold506	TRF	Tandem_Repeat	25100	25155	76	+	.	.
scaffold506	subtractBed	intrn	25103	25155	.	-	.	Parent=CGI_10019250;
	scaffold506	TRF	Tandem_Repeat	25103	25155	88	+	.	.
scaffold506	subtractBed	intrn	31912	31952	.	-	.	Parent=CGI_10019250;
	scaffold506	TRF	Tandem_Repeat	31912	31952	73	+	.	.
scaffold506	subtractBed	intrn	48484	48540	.	-	.	Parent=CGI_10019252;
	scaffold506	TRF	Tandem_Repeat	48484	48540	105	+	.	.
scaffold506	subtractBed	intrn	62309	62341	.	-	.	Parent=CGI_10019254;
	scaffold506	TRF	Tandem_Repeat	62309	62341	66	+	.	.
scaffold506	subtractBed	intrn	73743	73792	.	-	.	Parent=CGI_10019254;
	scaffold506	TRF	Tandem_Repeat	73743	73792	100	+	.	.
scaffold506	subtractBed	intrn	89703	89739	.	+	.	Parent=CGI_10019256;
	scaffold506	TRF	Tandem_Repeat	89703	89739	65	+	.	.
scaffold506	subtractBed	intrn	90627	90670	.	+	.	Parent=CGI_10019256;
	scaffold506	TRF	Tandem_Repeat	90627	90670	79	+	.	.
scaffold506	subtractBed	intrn	92101	92372	.	+	.	Parent=CGI_10019256;
	scaffold506	TRF	Tandem_Repeat	92101	92372	400	+	.	.
scaffold506	subtractBed	intrn	92112	92372	.	+	.	Parent=CGI_10019256;
	scaffold506	TRF	Tandem_Repeat	92112	92372	441	+	.	.
scaffold506	subtractBed	intrn	117661	117688	.	-	.	Parent=CGI_10019257;
	scaffold506	TRF	Tandem_Repeat	117661	117688	56	+	.	.
scaffold506	subtractBed	intrn	152163	152225	.	-	.	Parent=CGI_10019258;
	scaffold506	TRF	Tandem_Repeat	152163	152225	126	+	.	.
scaffold506	subtractBed	intrn	197735	197790	.	-	.	Parent=CGI_10019259;
	scaffold506	TRF	Tandem_Repeat	197735	197790	112	+	.	.
scaffold506	subtractBed	intrn	250873	250928	.	+	.	Parent=CGI_10019263;
	scaffold506	TRF	Tandem_Repeat	250873	250928	112	+	.	.
scaffold506	subtractBed	intrn	254966	255006	.	+	.	Parent=CGI_10019263;
	scaffold506	TRF	Tandem_Repeat	254966	255006	82	+	.	.
scaffold506	subtractBed	intrn	255409	255459	.	+	.	Parent=CGI_10019263;
	scaffold506	TRF	Tandem_Repeat	255409	255459	68	+	.	.
scaffold506	subtractBed	intrn	259059	259100	.	+	.	Parent=CGI_10019263;
	scaffold506	TRF	Tandem_Repeat	259059	259100	84	+	.	.
scaffold506	subtractBed	intrn	264118	264155	.	+	.	Parent=CGI_10019263;
	scaffold506	TRF	Tandem_Repeat	264118	264155	76	+	.	.
scaffold506	subtractBed	intrn	265617	265852	.	+	.	Parent=CGI_10019263;
	scaffold506	WUBlastX	LINE_CR1-L2	265617	265859	36	-	.	.
scaffold506	subtractBed	intrn	272493	273039	.	+	.	Parent=CGI_10019265;
	scaffold506	TRF	Tandem_Repeat	272493	273039	829	+	.	.
scaffold506	subtractBed	intrn	274554	274609	.	+	.	Parent=CGI_10019265;
	scaffold506	TRF	Tandem_Repeat	274554	274609	112	+	.	.
scaffold506	subtractBed	intrn	333505	333644	.	+	.	Parent=CGI_10019269;
	scaffold506	TRF	Tandem_Repeat	333505	333644	153	+	.	.
scaffold506	subtractBed	intrn	339055	339194	.	+	.	Parent=CGI_10019269;
	scaffold506	TRF	Tandem_Repeat	339055	339194	153	+	.	.
scaffold506	subtractBed	intrn	349173	349269	.	-	.	Parent=CGI_10019270;
	scaffold506	TRF	Tandem_Repeat	349173	349269	107	+	.	.
scaffold506	subtractBed	intrn	370882	370938	.	-	.	Parent=CGI_10019271;
	scaffold506	TRF	Tandem_Repeat	370882	370938	114	+	.	.
scaffold506	subtractBed	intrn	379718	379775	.	+	.	Parent=CGI_10019272;
	scaffold506	TRF	Tandem_Repeat	379718	379775	116	+	.	.
scaffold506	subtractBed	intrn	382339	382374	.	+	.	Parent=CGI_10019272;
	scaffold506	TRF	Tandem_Repeat	382339	382374	72	+	.	.
scaffold506	subtractBed	intrn	393000	393039	.	+	.	Parent=CGI_10019274;
	scaffold506	TRF	Tandem_Repeat	393000	393039	62	+	.	.
scaffold506	subtractBed	intrn	401168	401213	.	+	.	Parent=CGI_10019274;
	scaffold506	TRF	Tandem_Repeat	401168	401213	92	+	.	.
scaffold506	subtractBed	intrn	408087	408113	.	-	.	Parent=CGI_10019275;
	scaffold506	TRF	Tandem_Repeat	408087	408113	54	+	.	.
scaffold506	subtractBed	intrn	408962	409068	.	-	.	Parent=CGI_10019275;
	scaffold506	TRF	Tandem_Repeat	408962	409068	178	+	.	.
scaffold506	subtractBed	intrn	408962	409068	.	-	.	Parent=CGI_10019275;
	scaffold506	TRF	Tandem_Repeat	408962	409068	196	+	.	.
scaffold506	subtractBed	intrn	434396	434452	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	434396	434452	114	+	.	.
scaffold506	subtractBed	intrn	438473	438545	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	438473	438545	96	+	.	.
scaffold506	subtractBed	intrn	436077	436388	.	+	.	Parent=CGI_10019276;
	scaffold506	WUBlastX	LINE_L2	436077	436388	69	-	.	.
scaffold506	subtractBed	intrn	444253	444318	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	444253	444318	132	+	.	.
scaffold506	subtractBed	intrn	453600	453635	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	453600	453635	72	+	.	.
scaffold506	subtractBed	intrn	453652	453707	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	453652	453707	103	+	.	.
scaffold506	subtractBed	intrn	453964	454011	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	453964	454011	96	+	.	.
scaffold506	subtractBed	intrn	454851	454884	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	454851	454884	68	+	.	.
scaffold506	subtractBed	intrn	456251	456290	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	456251	456290	80	+	.	.
scaffold506	subtractBed	intrn	459625	459693	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	459625	459693	120	+	.	.
scaffold506	subtractBed	intrn	463643	463699	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	463643	463699	114	+	.	.
scaffold506	subtractBed	intrn	463789	463823	.	+	.	Parent=CGI_10019276;
	scaffold506	TRF	Tandem_Repeat	463789	463823	70	+	.	.
scaffold506	subtractBed	intrn	503114	503173	.	+	.	Parent=CGI_10019278;
	scaffold506	TRF	Tandem_Repeat	503114	503173	120	+	.	.
scaffold506	subtractBed	intrn	510004	510114	.	+	.	Parent=CGI_10019278;
	scaffold506	TRF	Tandem_Repeat	510004	510114	204	+	.	.
scaffold506	subtractBed	intrn	511580	511630	.	+	.	Parent=CGI_10019278;
	scaffold506	TRF	Tandem_Repeat	511580	511630	102	+	.	.
scaffold506	subtractBed	intrn	520393	520518	.	+	.	Parent=CGI_10019279;
	scaffold506	TRF	Tandem_Repeat	520393	520518	207	+	.	.
scaffold507	subtractBed	intrn	16691	16758	.	+	.	Parent=CGI_10019082;
	scaffold507	TRF	Tandem_Repeat	16691	16758	118	+	.	.
scaffold507	subtractBed	intrn	29326	29385	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	DNA_Sola	29326	29385	32	+	.	.
scaffold507	subtractBed	intrn	29739	29743	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	DNA_Sola	29739	29858	107	+	.	.
scaffold507	subtractBed	intrn	29858	29858	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	DNA_Sola	29739	29858	107	+	.	.
scaffold507	subtractBed	intrn	31383	32070	.	+	.	Parent=CGI_10019083;
	scaffold507	TRF	Tandem_Repeat	31383	32070	922	+	.	.
scaffold507	subtractBed	intrn	32075	32125	.	+	.	Parent=CGI_10019083;
	scaffold507	TRF	Tandem_Repeat	32075	32125	57	+	.	.
scaffold507	subtractBed	intrn	32929	33363	.	+	.	Parent=CGI_10019083;
	scaffold507	TRF	Tandem_Repeat	32929	33363	480	+	.	.
scaffold507	subtractBed	intrn	38005	38184	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	LINE_L1	38005	38184	77	+	.	.
scaffold507	subtractBed	intrn	37951	38175	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	LINE_L1	37951	38175	45	+	.	.
scaffold507	subtractBed	intrn	37951	38259	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	LINE_L1-Tx1	37951	38259	38	+	.	.
scaffold507	subtractBed	intrn	38244	38888	.	+	.	Parent=CGI_10019083;
	scaffold507	WUBlastX	LINE_L1-Tx1	38244	38888	82	+	.	.
scaffold507	subtractBed	intrn	45571	45602	.	-	.	Parent=CGI_10019084;
	scaffold507	TRF	Tandem_Repeat	45571	45602	64	+	.	.
scaffold507	subtractBed	intrn	42099	42575	.	-	.	Parent=CGI_10019084;
	scaffold507	WUBlastX	LTR_Ngaro	42099	42575	169	-	.	.
scaffold507	subtractBed	intrn	41997	42536	.	-	.	Parent=CGI_10019084;
	scaffold507	WUBlastX	LTR_Ngaro	41997	42536	123	-	.	.
scaffold507	subtractBed	intrn	42144	42536	.	-	.	Parent=CGI_10019084;
	scaffold507	WUBlastX	LTR_Ngaro	42144	42536	190	-	.	.
scaffold507	subtractBed	intrn	41925	42806	.	-	.	Parent=CGI_10019084;
	scaffold507	WUBlastX	LTR_Ngaro	41925	42806	76	-	.	.
scaffold507	subtractBed	intrn	64107	64172	.	-	.	Parent=CGI_10019084;
	scaffold507	TRF	Tandem_Repeat	64107	64172	132	+	.	.
scaffold507	subtractBed	intrn	130776	130807	.	-	.	Parent=CGI_10019088;
	scaffold507	TRF	Tandem_Repeat	130776	130807	64	+	.	.
scaffold507	subtractBed	intrn	179966	180055	.	-	.	Parent=CGI_10019089;
	scaffold507	TRF	Tandem_Repeat	179966	180055	85	+	.	.
scaffold507	subtractBed	intrn	178046	178381	.	-	.	Parent=CGI_10019089;
	scaffold507	WUBlastX	LINE_L1-Tx1	178046	178381	171	+	.	.
scaffold507	subtractBed	intrn	178392	178607	.	-	.	Parent=CGI_10019089;
	scaffold507	WUBlastX	LINE_L1-Tx1	178392	178607	88	+	.	.
scaffold507	subtractBed	intrn	178604	179119	.	-	.	Parent=CGI_10019089;
	scaffold507	WUBlastX	LINE_L1-Tx1	178604	179119	149	+	.	.
scaffold507	subtractBed	intrn	180866	181275	.	-	.	Parent=CGI_10019089;
	scaffold507	TRF	Tandem_Repeat	180866	181275	354	+	.	.
scaffold507	subtractBed	intrn	255165	255200	.	-	.	Parent=CGI_10019093;
	scaffold507	TRF	Tandem_Repeat	255165	255200	54	+	.	.
scaffold507	subtractBed	intrn	264413	264892	.	-	.	Parent=CGI_10019093;
	scaffold507	TRF	Tandem_Repeat	264413	264903	582	+	.	.
scaffold507	subtractBed	intrn	268984	269160	.	-	.	Parent=CGI_10019093;
	scaffold507	WUBlastX	LINE_RTE-X	268984	269160	84	-	.	.
scaffold507	subtractBed	intrn	268945	269163	.	-	.	Parent=CGI_10019093;
	scaffold507	WUBlastX	LINE_RTE-X	268945	269163	48	-	.	.
scaffold507	subtractBed	intrn	270952	271167	.	-	.	Parent=CGI_10019093;
	scaffold507	WUBlastX	LINE_L2	270952	271167	42	+	.	.
scaffold507	subtractBed	intrn	271188	271373	.	-	.	Parent=CGI_10019093;
	scaffold507	WUBlastX	LINE_CR1-L2	271188	271373	24	+	.	.
scaffold507	subtractBed	intrn	271176	271298	.	-	.	Parent=CGI_10019093;
	scaffold507	WUBlastX	LINE_CR1-L2	271176	271298	26	+	.	.
scaffold507	subtractBed	intrn	289939	290011	.	-	.	Parent=CGI_10019094;
	scaffold507	TRF	Tandem_Repeat	289939	290011	128	+	.	.
scaffold507	subtractBed	intrn	295266	295484	.	-	.	Parent=CGI_10019094;
	scaffold507	TRF	Tandem_Repeat	295266	295484	226	+	.	.
scaffold507	subtractBed	intrn	299284	299727	.	-	.	Parent=CGI_10019094;
	scaffold507	TRF	Tandem_Repeat	299284	299727	843	+	.	.
scaffold507	subtractBed	intrn	388832	388964	.	-	.	Parent=CGI_10019100;
	scaffold507	TRF	Tandem_Repeat	388832	388964	129	+	.	.
scaffold507	subtractBed	intrn	388865	389140	.	-	.	Parent=CGI_10019100;
	scaffold507	TRF	Tandem_Repeat	388865	389140	355	+	.	.
scaffold507	subtractBed	intrn	404371	404424	.	-	.	Parent=CGI_10019101;
	scaffold507	TRF	Tandem_Repeat	404371	404424	108	+	.	.
scaffold507	subtractBed	intrn	424522	424583	.	+	.	Parent=CGI_10019102;
	scaffold507	TRF	Tandem_Repeat	424522	424583	124	+	.	.
scaffold507	subtractBed	intrn	492890	492991	.	+	.	Parent=CGI_10019105;
	scaffold507	WUBlastX	DNA_Academ	492548	493906	632	+	.	.
scaffold508	subtractBed	intrn	15869	16192	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	15869	16192	173	-	.	.
scaffold508	subtractBed	intrn	15857	16240	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	15857	16240	99	-	.	.
scaffold508	subtractBed	intrn	15350	15850	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	15350	15850	251	-	.	.
scaffold508	subtractBed	intrn	12280	13788	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	12280	13788	987	-	.	.
scaffold508	subtractBed	intrn	15134	15850	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	15134	15850	221	-	.	.
scaffold508	subtractBed	intrn	16243	16338	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Copia	16243	16338	20	-	.	.
scaffold508	subtractBed	intrn	16294	17247	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	16294	17358	80	-	.	.
scaffold508	subtractBed	intrn	16291	17124	.	-	.	Parent=CGI_10011191;
	scaffold508	WUBlastX	LTR_Gypsy	16291	17124	195	-	.	.
scaffold508	subtractBed	intrn	222286	222317	.	+	.	Parent=CGI_10011205;
	scaffold508	TRF	Tandem_Repeat	222286	222317	64	+	.	.
scaffold508	subtractBed	intrn	241298	241835	.	+	.	Parent=CGI_10011205;
	scaffold508	TRF	Tandem_Repeat	241298	241835	959	+	.	.
scaffold508	subtractBed	intrn	249559	249604	.	+	.	Parent=CGI_10011205;
	scaffold508	TRF	Tandem_Repeat	249559	249604	67	+	.	.
scaffold508	subtractBed	intrn	267129	267172	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	267129	267172	88	+	.	.
scaffold508	subtractBed	intrn	269689	269795	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269689	269795	63	+	.	.
scaffold508	subtractBed	intrn	269847	269925	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269847	269925	56	+	.	.
scaffold508	subtractBed	intrn	269848	270531	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269848	270531	289	+	.	.
scaffold508	subtractBed	intrn	269847	270499	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269847	270499	162	+	.	.
scaffold508	subtractBed	intrn	269953	270353	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269953	270353	70	+	.	.
scaffold508	subtractBed	intrn	269847	270493	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	269847	270493	156	+	.	.
scaffold508	subtractBed	intrn	273149	273192	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	273149	273192	88	+	.	.
scaffold508	subtractBed	intrn	274060	274107	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	274060	274107	87	+	.	.
scaffold508	subtractBed	intrn	275595	275625	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	275595	275625	53	+	.	.
scaffold508	subtractBed	intrn	279322	279376	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	279322	279376	92	+	.	.
scaffold508	subtractBed	intrn	279605	280207	.	+	.	Parent=CGI_10011206;
	scaffold508	TRF	Tandem_Repeat	279605	280207	523	+	.	.
scaffold509	subtractBed	intrn	17073	17654	.	-	.	Parent=CGI_10018635;
	scaffold509	WUBlastX	DNA_TcMar-Tc1	17073	17654	355	+	.	.
scaffold509	subtractBed	intrn	16959	17654	.	-	.	Parent=CGI_10018635;
	scaffold509	WUBlastX	DNA_TcMar-Tc1	16959	17654	191	+	.	.
scaffold509	subtractBed	intrn	62129	62277	.	-	.	Parent=CGI_10018638;
	scaffold509	TRF	Tandem_Repeat	62129	62287	192	+	.	.
scaffold509	subtractBed	intrn	61469	61666	.	-	.	Parent=CGI_10018638;
	scaffold509	WUBlastX	LINE_Penelope	61469	61666	64	-	.	.
scaffold509	subtractBed	intrn	64954	64998	.	-	.	Parent=CGI_10018638;
	scaffold509	TRF	Tandem_Repeat	64954	64998	90	+	.	.
scaffold509	subtractBed	intrn	97313	97403	.	-	.	Parent=CGI_10018642;
	scaffold509	TRF	Tandem_Repeat	97313	97403	182	+	.	.
scaffold509	subtractBed	intrn	93259	93717	.	-	.	Parent=CGI_10018642;
	scaffold509	WUBlastX	LTR_Ngaro	93259	93717	166	+	.	.
scaffold509	subtractBed	intrn	92550	93251	.	-	.	Parent=CGI_10018642;
	scaffold509	WUBlastX	LTR_Ngaro	92550	93251	459	+	.	.
scaffold509	subtractBed	intrn	93259	93630	.	-	.	Parent=CGI_10018642;
	scaffold509	WUBlastX	LTR_Ngaro	93259	93630	215	+	.	.
scaffold509	subtractBed	intrn	92550	93392	.	-	.	Parent=CGI_10018642;
	scaffold509	WUBlastX	LTR_Ngaro	92550	93392	442	+	.	.
scaffold509	subtractBed	intrn	93631	93744	.	-	.	Parent=CGI_10018642;
	scaffold509	WUBlastX	LTR_Ngaro	93631	93744	44	+	.	.
scaffold509	subtractBed	intrn	206650	206859	.	-	.	Parent=CGI_10018644;
	scaffold509	WUBlastX	LINE_RTE-BovB	206650	206859	23	-	.	.
scaffold509	subtractBed	intrn	206501	206650	.	-	.	Parent=CGI_10018644;
	scaffold509	WUBlastX	LINE_RTE-BovB	206501	206650	44	-	.	.
scaffold509	subtractBed	intrn	206474	206647	.	-	.	Parent=CGI_10018644;
	scaffold509	WUBlastX	LINE_RTE-BovB	206474	206647	41	-	.	.
scaffold509	subtractBed	intrn	206647	206808	.	-	.	Parent=CGI_10018644;
	scaffold509	WUBlastX	LINE_RTE-BovB	206647	206808	54	-	.	.
scaffold509	subtractBed	intrn	256872	257288	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	256872	257288	84	+	.	.
scaffold509	subtractBed	intrn	258288	258599	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	258288	258599	78	+	.	.
scaffold509	subtractBed	intrn	256058	256195	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1	256058	256195	80	+	.	.
scaffold509	subtractBed	intrn	256249	256830	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	256249	256830	221	+	.	.
scaffold509	subtractBed	intrn	257204	257611	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	257204	257611	310	+	.	.
scaffold509	subtractBed	intrn	257599	258042	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	257599	258042	241	+	.	.
scaffold509	subtractBed	intrn	257975	258349	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	257975	258349	127	+	.	.
scaffold509	subtractBed	intrn	258622	259512	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	258622	259512	46	+	.	.
scaffold509	subtractBed	intrn	258279	258542	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1	258279	258542	82	+	.	.
scaffold509	subtractBed	intrn	256043	256222	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1-Tx1	256043	256222	59	+	.	.
scaffold509	subtractBed	intrn	258276	258476	.	+	.	Parent=CGI_10018647;
	scaffold509	WUBlastX	LINE_L1	258276	258476	93	+	.	.
scaffold509	subtractBed	intrn	265776	265814	.	+	.	Parent=CGI_10018647;
	scaffold509	TRF	Tandem_Repeat	265776	265814	78	+	.	.
scaffold509	subtractBed	intrn	266052	266677	.	+	.	Parent=CGI_10018647;
	scaffold509	TRF	Tandem_Repeat	266052	266677	225	+	.	.
scaffold509	subtractBed	intrn	266206	266674	.	+	.	Parent=CGI_10018647;
	scaffold509	TRF	Tandem_Repeat	266206	266674	512	+	.	.
scaffold509	subtractBed	intrn	266677	266939	.	+	.	Parent=CGI_10018647;
	scaffold509	TRF	Tandem_Repeat	266677	266939	214	+	.	.
scaffold509	subtractBed	intrn	334214	334263	.	-	.	Parent=CGI_10018649;
	scaffold509	TRF	Tandem_Repeat	334214	334263	100	+	.	.
scaffold509	subtractBed	intrn	357602	357736	.	+	.	Parent=CGI_10018650;
	scaffold509	TRF	Tandem_Repeat	357602	357736	227	+	.	.
scaffold509	subtractBed	intrn	367932	367978	.	+	.	Parent=CGI_10018650;
	scaffold509	TRF	Tandem_Repeat	367932	367978	94	+	.	.
scaffold509	subtractBed	intrn	370943	371321	.	+	.	Parent=CGI_10018650;
	scaffold509	TRF	Tandem_Repeat	370943	371321	415	+	.	.
scaffold509	subtractBed	intrn	399487	399548	.	-	.	Parent=CGI_10018651;
	scaffold509	TRF	Tandem_Repeat	399487	399548	124	+	.	.
scaffold509	subtractBed	intrn	405714	405796	.	+	.	Parent=CGI_10018652;
	scaffold509	TRF	Tandem_Repeat	405714	405796	62	+	.	.
scaffold509	subtractBed	intrn	405738	405844	.	+	.	Parent=CGI_10018652;
	scaffold509	TRF	Tandem_Repeat	405738	405844	88	+	.	.
scaffold509	subtractBed	intrn	422750	422781	.	+	.	Parent=CGI_10018654;
	scaffold509	TRF	Tandem_Repeat	422750	422781	50	+	.	.
scaffold509	subtractBed	intrn	427862	427927	.	+	.	Parent=CGI_10018654;
	scaffold509	TRF	Tandem_Repeat	427862	427927	107	+	.	.
scaffold509	subtractBed	intrn	430897	430954	.	+	.	Parent=CGI_10018654;
	scaffold509	TRF	Tandem_Repeat	430897	430954	59	+	.	.
scaffold509	subtractBed	intrn	481626	481686	.	-	.	Parent=CGI_10018658;
	scaffold509	TRF	Tandem_Repeat	481626	481686	113	+	.	.
scaffold509	subtractBed	intrn	485573	485786	.	-	.	Parent=CGI_10018658;
	scaffold509	TRF	Tandem_Repeat	485573	485786	142	+	.	.
scaffold509	subtractBed	intrn	490266	490305	.	-	.	Parent=CGI_10018658;
	scaffold509	TRF	Tandem_Repeat	490266	490305	53	+	.	.
scaffold509	subtractBed	intrn	491986	492019	.	-	.	Parent=CGI_10018658;
	scaffold509	TRF	Tandem_Repeat	491986	492019	59	+	.	.
scaffold509	subtractBed	intrn	511110	511146	.	-	.	Parent=CGI_10018660;
	scaffold509	TRF	Tandem_Repeat	511110	511146	74	+	.	.
scaffold509	subtractBed	intrn	512154	512198	.	-	.	Parent=CGI_10018660;
	scaffold509	TRF	Tandem_Repeat	512154	512198	90	+	.	.
scaffold509	subtractBed	intrn	517060	517147	.	+	.	Parent=CGI_10018661;
	scaffold509	TRF	Tandem_Repeat	517060	517147	167	+	.	.
scaffold509	subtractBed	intrn	517800	517824	.	+	.	Parent=CGI_10018661;
	scaffold509	TRF	Tandem_Repeat	517800	517824	50	+	.	.
scaffold509	subtractBed	intrn	526708	526778	.	-	.	Parent=CGI_10018662;
	scaffold509	TRF	Tandem_Repeat	526708	526778	74	+	.	.
scaffold509	subtractBed	intrn	527992	528096	.	-	.	Parent=CGI_10018662;
	scaffold509	TRF	Tandem_Repeat	527992	528096	94	+	.	.
scaffold510	subtractBed	intrn	29445	29492	.	-	.	Parent=CGI_10013762;
	scaffold510	TRF	Tandem_Repeat	29445	29492	96	+	.	.
scaffold510	subtractBed	intrn	29817	29865	.	-	.	Parent=CGI_10013762;
	scaffold510	TRF	Tandem_Repeat	29817	29865	98	+	.	.
scaffold510	subtractBed	intrn	64349	64379	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	64349	64379	53	+	.	.
scaffold510	subtractBed	intrn	64379	64403	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	64379	64403	50	+	.	.
scaffold510	subtractBed	intrn	71028	71065	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	71028	71065	67	+	.	.
scaffold510	subtractBed	intrn	73087	73129	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	73087	73129	50	+	.	.
scaffold510	subtractBed	intrn	76333	76378	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	76333	76378	92	+	.	.
scaffold510	subtractBed	intrn	76445	76489	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	76445	76489	81	+	.	.
scaffold510	subtractBed	intrn	77948	77991	.	+	.	Parent=CGI_10013766;
	scaffold510	TRF	Tandem_Repeat	77948	77991	88	+	.	.
scaffold510	subtractBed	intrn	172797	172904	.	+	.	Parent=CGI_10013769;
	scaffold510	TRF	Tandem_Repeat	172797	172904	130	+	.	.
scaffold510	subtractBed	intrn	169942	171501	.	+	.	Parent=CGI_10013769;
	scaffold510	WUBlastX	LTR_Ngaro	169942	171501	981	-	.	.
scaffold510	subtractBed	intrn	171524	172513	.	+	.	Parent=CGI_10013769;
	scaffold510	WUBlastX	LTR_Ngaro	171524	172513	124	-	.	.
scaffold510	subtractBed	intrn	169019	169984	.	+	.	Parent=CGI_10013769;
	scaffold510	WUBlastX	LTR_Ngaro	169019	169984	291	-	.	.
scaffold510	subtractBed	intrn	272658	272858	.	+	.	Parent=CGI_10013771;
	scaffold510	WUBlastX	DNA_IS4EU	272658	272858	74	+	.	.
scaffold510	subtractBed	intrn	329184	329211	.	-	.	Parent=CGI_10013772;
	scaffold510	TRF	Tandem_Repeat	329184	329211	56	+	.	.
scaffold510	subtractBed	intrn	355060	355503	.	-	.	Parent=CGI_10013775;
	scaffold510	WUBlastX	LTR_DIRS	355060	355503	170	-	.	.
scaffold510	subtractBed	intrn	354817	355011	.	-	.	Parent=CGI_10013775;
	scaffold510	WUBlastX	LTR_DIRS	354817	355011	127	-	.	.
scaffold511	subtractBed	intrn	10257	10298	.	+	.	Parent=CGI_10001110;
	scaffold511	TRF	Tandem_Repeat	10257	10298	84	+	.	.
scaffold513	subtractBed	intrn	2929	2996	.	+	.	Parent=CGI_10022134;
	scaffold513	TRF	Tandem_Repeat	2929	2996	136	+	.	.
scaffold513	subtractBed	intrn	9573	10559	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	9573	10559	399	+	.	.
scaffold513	subtractBed	intrn	13064	13495	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	13064	13495	316	+	.	.
scaffold513	subtractBed	intrn	10884	11360	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	10884	11360	182	+	.	.
scaffold513	subtractBed	intrn	9180	9332	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	9180	9332	41	+	.	.
scaffold513	subtractBed	intrn	9918	10640	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	9918	10640	418	+	.	.
scaffold513	subtractBed	intrn	11485	12846	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	11485	12846	881	+	.	.
scaffold513	subtractBed	intrn	10699	11019	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	10699	11019	79	+	.	.
scaffold513	subtractBed	intrn	11025	11609	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	11025	11609	220	+	.	.
scaffold513	subtractBed	intrn	12229	12957	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	12229	12957	208	+	.	.
scaffold513	subtractBed	intrn	11019	11354	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	11019	11354	247	+	.	.
scaffold513	subtractBed	intrn	12870	13070	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	12870	13070	178	+	.	.
scaffold513	subtractBed	intrn	10642	11019	.	+	.	Parent=CGI_10022134;
	scaffold513	WUBlastX	LTR_Pao	10642	11019	42	+	.	.
scaffold513	subtractBed	intrn	27663	27760	.	+	.	Parent=CGI_10022134;
	scaffold513	TRF	Tandem_Repeat	27663	27760	187	+	.	.
scaffold513	subtractBed	intrn	33317	33342	.	+	.	Parent=CGI_10022134;
	scaffold513	TRF	Tandem_Repeat	33317	33342	52	+	.	.
scaffold513	subtractBed	intrn	35842	35872	.	+	.	Parent=CGI_10022134;
	scaffold513	TRF	Tandem_Repeat	35842	35872	62	+	.	.
scaffold513	subtractBed	intrn	83542	83581	.	-	.	Parent=CGI_10022137;
	scaffold513	TRF	Tandem_Repeat	83542	83581	53	+	.	.
scaffold513	subtractBed	intrn	86017	86051	.	-	.	Parent=CGI_10022137;
	scaffold513	TRF	Tandem_Repeat	86017	86051	52	+	.	.
scaffold513	subtractBed	intrn	155792	156529	.	-	.	Parent=CGI_10022138;
	scaffold513	WUBlastX	DNA_Kolobok-IS4	155792	156529	371	+	.	.
scaffold513	subtractBed	intrn	185101	185141	.	+	.	Parent=CGI_10022139;
	scaffold513	TRF	Tandem_Repeat	185101	185141	82	+	.	.
scaffold513	subtractBed	intrn	188670	188717	.	+	.	Parent=CGI_10022139;
	scaffold513	TRF	Tandem_Repeat	188670	188717	50	+	.	.
scaffold513	subtractBed	intrn	279959	280000	.	-	.	Parent=CGI_10022147;
	scaffold513	TRF	Tandem_Repeat	279959	280000	84	+	.	.
scaffold513	subtractBed	intrn	281236	281357	.	-	.	Parent=CGI_10022147;
	scaffold513	TRF	Tandem_Repeat	281236	281357	136	+	.	.
scaffold513	subtractBed	intrn	292104	292133	.	+	.	Parent=CGI_10022148;
	scaffold513	TRF	Tandem_Repeat	292104	292133	60	+	.	.
scaffold513	subtractBed	intrn	369141	369167	.	+	.	Parent=CGI_10022153;
	scaffold513	TRF	Tandem_Repeat	369141	369167	54	+	.	.
scaffold513	subtractBed	intrn	370578	370682	.	+	.	Parent=CGI_10022153;
	scaffold513	WUBlastX	DNA_Zator	370578	370682	21	+	.	.
scaffold513	subtractBed	intrn	370872	371021	.	+	.	Parent=CGI_10022153;
	scaffold513	WUBlastX	DNA_Zator	370872	371021	28	+	.	.
scaffold513	subtractBed	intrn	387601	387660	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	387601	387660	56	+	.	.
scaffold513	subtractBed	intrn	388770	389030	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	388770	389030	250	+	.	.
scaffold513	subtractBed	intrn	389072	389455	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	389072	389455	137	+	.	.
scaffold513	subtractBed	intrn	389215	389378	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	389215	389378	152	+	.	.
scaffold513	subtractBed	intrn	389459	389503	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	389459	389503	90	+	.	.
scaffold513	subtractBed	intrn	396075	396253	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	396075	396253	313	+	.	.
scaffold513	subtractBed	intrn	396947	397076	.	-	.	Parent=CGI_10022154;
	scaffold513	TRF	Tandem_Repeat	396947	397096	255	+	.	.
scaffold513	subtractBed	intrn	416800	416836	.	-	.	Parent=CGI_10022156;
	scaffold513	TRF	Tandem_Repeat	416800	416836	56	+	.	.
scaffold513	subtractBed	intrn	437201	437371	.	-	.	Parent=CGI_10022159;
	scaffold513	TRF	Tandem_Repeat	437201	437371	164	+	.	.
scaffold513	subtractBed	intrn	437370	437538	.	-	.	Parent=CGI_10022159;
	scaffold513	TRF	Tandem_Repeat	437370	437538	126	+	.	.
scaffold513	subtractBed	intrn	461712	462635	.	+	.	Parent=CGI_10022160;
	scaffold513	TRF	Tandem_Repeat	461712	462635	1254	+	.	.
scaffold513	subtractBed	intrn	463974	464512	.	+	.	Parent=CGI_10022160;
	scaffold513	TRF	Tandem_Repeat	463974	464512	635	+	.	.
scaffold513	subtractBed	intrn	490056	490143	.	+	.	Parent=CGI_10022161;
	scaffold513	TRF	Tandem_Repeat	490056	490143	56	+	.	.
scaffold513	subtractBed	intrn	529982	530018	.	-	.	Parent=CGI_10022162;
	scaffold513	TRF	Tandem_Repeat	529982	530018	74	+	.	.
scaffold513	subtractBed	intrn	557733	558282	.	-	.	Parent=CGI_10022166;
	scaffold513	TRF	Tandem_Repeat	557733	558282	458	+	.	.
scaffold513	subtractBed	intrn	575386	575413	.	-	.	Parent=CGI_10022166;
	scaffold513	TRF	Tandem_Repeat	575386	575413	56	+	.	.
scaffold513	subtractBed	intrn	615945	615974	.	+	.	Parent=CGI_10022174;
	scaffold513	TRF	Tandem_Repeat	615945	615974	51	+	.	.
scaffold513	subtractBed	intrn	631424	631459	.	+	.	Parent=CGI_10022174;
	scaffold513	TRF	Tandem_Repeat	631424	631459	63	+	.	.
scaffold513	subtractBed	intrn	631738	631782	.	+	.	Parent=CGI_10022174;
	scaffold513	TRF	Tandem_Repeat	631738	631782	54	+	.	.
scaffold514	subtractBed	intrn	16266	16422	.	+	.	Parent=CGI_10018343;
	scaffold514	TRF	Tandem_Repeat	16266	16422	129	+	.	.
scaffold514	subtractBed	intrn	22260	22756	.	+	.	Parent=CGI_10018344;
	scaffold514	TRF	Tandem_Repeat	22260	22756	165	+	.	.
scaffold514	subtractBed	intrn	22363	22763	.	+	.	Parent=CGI_10018344;
	scaffold514	TRF	Tandem_Repeat	22363	22763	283	+	.	.
scaffold514	subtractBed	intrn	25651	26642	.	+	.	Parent=CGI_10018344;
	scaffold514	TRF	Tandem_Repeat	25651	26642	1188	+	.	.
scaffold514	subtractBed	intrn	54100	54128	.	+	.	Parent=CGI_10018345;
	scaffold514	TRF	Tandem_Repeat	54100	54128	58	+	.	.
scaffold514	subtractBed	intrn	74087	74432	.	-	.	Parent=CGI_10018346;
	scaffold514	TRF	Tandem_Repeat	74087	74432	529	+	.	.
scaffold514	subtractBed	intrn	74091	74432	.	-	.	Parent=CGI_10018346;
	scaffold514	TRF	Tandem_Repeat	74091	74432	585	+	.	.
scaffold514	subtractBed	intrn	87981	88757	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_Gypsy	87981	88757	76	+	.	.
scaffold514	subtractBed	intrn	89716	90645	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_DIRS	89716	90645	558	+	.	.
scaffold514	subtractBed	intrn	88753	88836	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_Gypsy	88753	88836	23	+	.	.
scaffold514	subtractBed	intrn	88173	88757	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_DIRS	88173	88757	399	+	.	.
scaffold514	subtractBed	intrn	88778	89833	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_DIRS	88778	89833	661	+	.	.
scaffold514	subtractBed	intrn	87698	87862	.	-	.	Parent=CGI_10018346;
	scaffold514	WUBlastX	LTR_Gypsy	87698	87862	26	+	.	.
scaffold514	subtractBed	intrn	108943	109003	.	-	.	Parent=CGI_10018346;
	scaffold514	TRF	Tandem_Repeat	108943	109003	88	+	.	.
scaffold514	subtractBed	intrn	108940	109003	.	-	.	Parent=CGI_10018346;
	scaffold514	TRF	Tandem_Repeat	108940	109003	92	+	.	.
scaffold514	subtractBed	intrn	109755	109914	.	-	.	Parent=CGI_10018346;
	scaffold514	TRF	Tandem_Repeat	109755	109914	196	+	.	.
scaffold514	subtractBed	intrn	186336	187091	.	+	.	Parent=CGI_10018348;
	scaffold514	TRF	Tandem_Repeat	186336	187091	505	+	.	.
scaffold514	subtractBed	intrn	190304	190336	.	+	.	Parent=CGI_10018348;
	scaffold514	TRF	Tandem_Repeat	190304	190336	66	+	.	.
scaffold514	subtractBed	intrn	191442	191492	.	+	.	Parent=CGI_10018348;
	scaffold514	TRF	Tandem_Repeat	191442	191492	102	+	.	.
scaffold514	subtractBed	intrn	194056	194109	.	+	.	Parent=CGI_10018349;
	scaffold514	TRF	Tandem_Repeat	194056	194109	90	+	.	.
scaffold514	subtractBed	intrn	198311	198360	.	+	.	Parent=CGI_10018349;
	scaffold514	TRF	Tandem_Repeat	198311	198360	75	+	.	.
scaffold514	subtractBed	intrn	198312	198357	.	+	.	Parent=CGI_10018349;
	scaffold514	TRF	Tandem_Repeat	198312	198357	67	+	.	.
scaffold514	subtractBed	intrn	199797	200858	.	+	.	Parent=CGI_10018349;
	scaffold514	TRF	Tandem_Repeat	199797	200858	1390	+	.	.
scaffold514	subtractBed	intrn	220552	220592	.	+	.	Parent=CGI_10018353;
	scaffold514	TRF	Tandem_Repeat	220552	220592	82	+	.	.
scaffold514	subtractBed	intrn	267232	267278	.	-	.	Parent=CGI_10018355;
	scaffold514	TRF	Tandem_Repeat	267232	267278	85	+	.	.
scaffold514	subtractBed	intrn	324510	324575	.	-	.	Parent=CGI_10018357;
	scaffold514	TRF	Tandem_Repeat	324510	324575	132	+	.	.
scaffold514	subtractBed	intrn	324705	324841	.	-	.	Parent=CGI_10018357;
	scaffold514	TRF	Tandem_Repeat	324705	324841	274	+	.	.
scaffold514	subtractBed	intrn	326189	326226	.	-	.	Parent=CGI_10018357;
	scaffold514	TRF	Tandem_Repeat	326189	326226	76	+	.	.
scaffold514	subtractBed	intrn	387099	387244	.	+	.	Parent=CGI_10018362;
	scaffold514	TRF	Tandem_Repeat	387099	387244	256	+	.	.
scaffold514	subtractBed	intrn	394692	394725	.	+	.	Parent=CGI_10018362;
	scaffold514	TRF	Tandem_Repeat	394692	394725	68	+	.	.
scaffold514	subtractBed	intrn	452039	452080	.	-	.	Parent=CGI_10018365;
	scaffold514	TRF	Tandem_Repeat	452039	452080	84	+	.	.
scaffold514	subtractBed	intrn	456049	456459	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	456049	456459	180	-	.	.
scaffold514	subtractBed	intrn	456420	456998	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	456420	456998	172	-	.	.
scaffold514	subtractBed	intrn	457183	457326	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	457183	457326	29	-	.	.
scaffold514	subtractBed	intrn	456378	456866	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	456378	456866	390	-	.	.
scaffold514	subtractBed	intrn	455980	456426	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	455980	456426	109	-	.	.
scaffold514	subtractBed	intrn	471676	471915	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	471676	471915	53	+	.	.
scaffold514	subtractBed	intrn	471724	472077	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	471724	472077	103	+	.	.
scaffold514	subtractBed	intrn	472414	472674	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	472414	472674	59	+	.	.
scaffold514	subtractBed	intrn	471605	471691	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	471605	471691	20	+	.	.
scaffold514	subtractBed	intrn	471715	471948	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	471715	471948	128	+	.	.
scaffold514	subtractBed	intrn	472194	472424	.	-	.	Parent=CGI_10018365;
	scaffold514	WUBlastX	LTR_Gypsy	472194	472424	66	+	.	.
scaffold514	subtractBed	intrn	503241	503335	.	+	.	Parent=CGI_10018367;
	scaffold514	TRF	Tandem_Repeat	503241	503335	77	+	.	.
scaffold514	subtractBed	intrn	515990	516022	.	+	.	Parent=CGI_10018368;
	scaffold514	TRF	Tandem_Repeat	515990	516022	66	+	.	.
scaffold514	subtractBed	intrn	518032	518087	.	+	.	Parent=CGI_10018368;
	scaffold514	TRF	Tandem_Repeat	518032	518087	103	+	.	.
scaffold517	subtractBed	intrn	27745	28110	.	+	.	Parent=CGI_10008977;
	scaffold517	WUBlastX	LINE_Penelope	27745	28110	47	+	.	.
scaffold517	subtractBed	intrn	27835	28518	.	+	.	Parent=CGI_10008977;
	scaffold517	WUBlastX	LINE_Penelope	27835	28518	306	+	.	.
scaffold517	subtractBed	intrn	32542	32592	.	+	.	Parent=CGI_10008977;
	scaffold517	TRF	Tandem_Repeat	32542	32592	102	+	.	.
scaffold517	subtractBed	intrn	39243	39284	.	+	.	Parent=CGI_10008977;
	scaffold517	TRF	Tandem_Repeat	39243	39284	61	+	.	.
scaffold517	subtractBed	intrn	39240	39296	.	+	.	Parent=CGI_10008977;
	scaffold517	TRF	Tandem_Repeat	39240	39296	53	+	.	.
scaffold517	subtractBed	intrn	39240	39294	.	+	.	Parent=CGI_10008977;
	scaffold517	TRF	Tandem_Repeat	39240	39294	58	+	.	.
scaffold517	subtractBed	intrn	52816	52875	.	+	.	Parent=CGI_10008978;
	scaffold517	TRF	Tandem_Repeat	52816	52875	120	+	.	.
scaffold517	subtractBed	intrn	74133	74370	.	-	.	Parent=CGI_10008980;
	scaffold517	TRF	Tandem_Repeat	74133	74370	164	+	.	.
scaffold517	subtractBed	intrn	74193	74384	.	-	.	Parent=CGI_10008980;
	scaffold517	TRF	Tandem_Repeat	74193	74384	118	+	.	.
scaffold517	subtractBed	intrn	126754	126803	.	+	.	Parent=CGI_10008983;
	scaffold517	TRF	Tandem_Repeat	126754	126803	91	+	.	.
scaffold517	subtractBed	intrn	191056	191277	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	DNA_Kolobok	191056	191277	51	+	.	.
scaffold517	subtractBed	intrn	191411	191653	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	DNA_Kolobok	191411	191653	85	+	.	.
scaffold517	subtractBed	intrn	192221	192526	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	DNA_Kolobok	192221	192526	80	+	.	.
scaffold517	subtractBed	intrn	199445	199699	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1	199445	199699	58	-	.	.
scaffold517	subtractBed	intrn	199771	200259	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1-Tx1	199771	200259	174	-	.	.
scaffold517	subtractBed	intrn	200306	200857	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1-Tx1	200306	200857	349	-	.	.
scaffold517	subtractBed	intrn	199290	199436	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1	199290	199436	46	-	.	.
scaffold517	subtractBed	intrn	201127	201213	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1-Tx1	201127	201213	22	-	.	.
scaffold517	subtractBed	intrn	200099	200857	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1	200099	200857	192	-	.	.
scaffold517	subtractBed	intrn	199200	199403	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_L1	199200	199403	21	-	.	.
scaffold517	subtractBed	intrn	200528	200929	.	+	.	Parent=CGI_10008984;
	scaffold517	WUBlastX	LINE_CR1	200528	200929	46	-	.	.
scaffold517	subtractBed	intrn	209608	209781	.	-	.	Parent=CGI_10008985;
	scaffold517	WUBlastX	LINE_Penelope	209608	209781	33	-	.	.
scaffold517	subtractBed	intrn	209768	210058	.	-	.	Parent=CGI_10008985;
	scaffold517	WUBlastX	LINE_Penelope	209768	210058	38	-	.	.
scaffold517	subtractBed	intrn	209768	209971	.	-	.	Parent=CGI_10008985;
	scaffold517	WUBlastX	LINE_Penelope	209768	209971	81	-	.	.
scaffold520	subtractBed	intrn	26186	26200	.	+	.	Parent=CGI_10010951;
	scaffold520	WUBlastX	LINE_L1-Tx1	25634	26200	62	+	.	.
scaffold520	subtractBed	intrn	156801	157451	.	+	.	Parent=CGI_10010955;
	scaffold520	TRF	Tandem_Repeat	156801	157451	759	+	.	.
scaffold520	subtractBed	intrn	160063	160827	.	+	.	Parent=CGI_10010955;
	scaffold520	WUBlastX	LTR_Ngaro	160063	160827	334	+	.	.
scaffold520	subtractBed	intrn	220052	220087	.	-	.	Parent=CGI_10010957;
	scaffold520	TRF	Tandem_Repeat	220052	220087	63	+	.	.
scaffold520	subtractBed	intrn	271366	272700	.	+	.	Parent=CGI_10010959;
	scaffold520	WUBlastX	DNA_Kolobok	271366	272700	88	+	.	.
scaffold522	subtractBed	intrn	1363	1451	.	+	.	Parent=CGI_10020305;
	scaffold522	TRF	Tandem_Repeat	1363	1451	153	+	.	.
scaffold522	subtractBed	intrn	2495	2522	.	+	.	Parent=CGI_10020305;
	scaffold522	TRF	Tandem_Repeat	2495	2522	56	+	.	.
scaffold522	subtractBed	intrn	26328	26371	.	+	.	Parent=CGI_10020307;
	scaffold522	TRF	Tandem_Repeat	26328	26371	88	+	.	.
scaffold522	subtractBed	intrn	44706	44759	.	+	.	Parent=CGI_10020308;
	scaffold522	TRF	Tandem_Repeat	44706	44759	108	+	.	.
scaffold522	subtractBed	intrn	67825	68005	.	-	.	Parent=CGI_10020310;
	scaffold522	TRF	Tandem_Repeat	67825	68005	190	+	.	.
scaffold522	subtractBed	intrn	67846	68079	.	-	.	Parent=CGI_10020310;
	scaffold522	TRF	Tandem_Repeat	67846	68109	179	+	.	.
scaffold522	subtractBed	intrn	76878	76921	.	-	.	Parent=CGI_10020310;
	scaffold522	TRF	Tandem_Repeat	76878	76921	79	+	.	.
scaffold522	subtractBed	intrn	79980	80009	.	-	.	Parent=CGI_10020310;
	scaffold522	TRF	Tandem_Repeat	79980	80009	60	+	.	.
scaffold522	subtractBed	intrn	76878	76921	.	+	.	Parent=CGI_10020311;
	scaffold522	TRF	Tandem_Repeat	76878	76921	79	+	.	.
scaffold522	subtractBed	intrn	79980	80009	.	+	.	Parent=CGI_10020311;
	scaffold522	TRF	Tandem_Repeat	79980	80009	60	+	.	.
scaffold522	subtractBed	intrn	158483	158653	.	-	.	Parent=CGI_10020315;
	scaffold522	TRF	Tandem_Repeat	158483	158653	170	+	.	.
scaffold522	subtractBed	intrn	180034	181878	.	+	.	Parent=CGI_10020318;
	scaffold522	TRF	Tandem_Repeat	180034	181878	2308	+	.	.
scaffold522	subtractBed	intrn	193372	193413	.	-	.	Parent=CGI_10020319;
	scaffold522	TRF	Tandem_Repeat	193372	193413	84	+	.	.
scaffold522	subtractBed	intrn	221750	221793	.	+	.	Parent=CGI_10020320;
	scaffold522	TRF	Tandem_Repeat	221750	221793	88	+	.	.
scaffold522	subtractBed	intrn	223948	224364	.	+	.	Parent=CGI_10020320;
	scaffold522	WUBlastX	LINE_RTE-X	223948	224364	34	+	.	.
scaffold522	subtractBed	intrn	224017	224388	.	+	.	Parent=CGI_10020320;
	scaffold522	WUBlastX	LINE_RTE-X	224017	224388	68	+	.	.
scaffold522	subtractBed	intrn	224020	224229	.	+	.	Parent=CGI_10020320;
	scaffold522	WUBlastX	LINE_RTE-X	224020	224229	74	+	.	.
scaffold522	subtractBed	intrn	227791	227868	.	+	.	Parent=CGI_10020320;
	scaffold522	TRF	Tandem_Repeat	227791	227868	156	+	.	.
scaffold522	subtractBed	intrn	227798	227906	.	+	.	Parent=CGI_10020320;
	scaffold522	TRF	Tandem_Repeat	227798	227906	76	+	.	.
scaffold522	subtractBed	intrn	258195	258871	.	+	.	Parent=CGI_10020324;
	scaffold522	TRF	Tandem_Repeat	258195	258871	1175	+	.	.
scaffold522	subtractBed	intrn	258195	259449	.	+	.	Parent=CGI_10020324;
	scaffold522	TRF	Tandem_Repeat	258195	259449	1332	+	.	.
scaffold522	subtractBed	intrn	258873	259449	.	+	.	Parent=CGI_10020324;
	scaffold522	TRF	Tandem_Repeat	258873	259449	1015	+	.	.
scaffold522	subtractBed	intrn	279834	279877	.	-	.	Parent=CGI_10020325;
	scaffold522	TRF	Tandem_Repeat	279834	279877	61	+	.	.
scaffold522	subtractBed	intrn	295574	295628	.	-	.	Parent=CGI_10020325;
	scaffold522	TRF	Tandem_Repeat	295574	295628	101	+	.	.
scaffold522	subtractBed	intrn	294911	294955	.	-	.	Parent=CGI_10020325;
	scaffold522	TRF	Tandem_Repeat	294911	294955	90	+	.	.
scaffold522	subtractBed	intrn	299729	300507	.	-	.	Parent=CGI_10020325;
	scaffold522	TRF	Tandem_Repeat	299729	300507	1328	+	.	.
scaffold522	subtractBed	intrn	300516	300559	.	-	.	Parent=CGI_10020325;
	scaffold522	TRF	Tandem_Repeat	300516	300559	61	+	.	.
scaffold522	subtractBed	intrn	359909	360040	.	-	.	Parent=CGI_10020327;
	scaffold522	TRF	Tandem_Repeat	359909	360040	119	+	.	.
scaffold522	subtractBed	intrn	361607	361684	.	-	.	Parent=CGI_10020327;
	scaffold522	TRF	Tandem_Repeat	361607	361684	52	+	.	.
scaffold522	subtractBed	intrn	393754	393817	.	+	.	Parent=CGI_10020330;
	scaffold522	TRF	Tandem_Repeat	393754	393817	128	+	.	.
scaffold522	subtractBed	intrn	416539	416620	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	416539	416620	113	+	.	.
scaffold522	subtractBed	intrn	421207	421306	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	421207	421306	56	+	.	.
scaffold522	subtractBed	intrn	421198	421291	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	421198	421291	77	+	.	.
scaffold522	subtractBed	intrn	427939	428002	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	427939	428002	51	+	.	.
scaffold522	subtractBed	intrn	429072	429106	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	429072	429106	63	+	.	.
scaffold522	subtractBed	intrn	429155	429201	.	-	.	Parent=CGI_10020331;
	scaffold522	TRF	Tandem_Repeat	429155	429201	94	+	.	.
scaffold522	subtractBed	intrn	489656	489821	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	489656	489821	98	+	.	.
scaffold522	subtractBed	intrn	489637	489831	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	489637	489831	354	+	.	.
scaffold522	subtractBed	intrn	489615	489831	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	489615	489831	163	+	.	.
scaffold522	subtractBed	intrn	490866	490997	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	490866	490997	93	+	.	.
scaffold522	subtractBed	intrn	490859	491007	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	490859	491007	289	+	.	.
scaffold522	subtractBed	intrn	490880	491027	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	490880	491035	136	+	.	.
scaffold522	subtractBed	intrn	493979	494015	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	493979	494015	65	+	.	.
scaffold522	subtractBed	intrn	496991	497406	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	496991	497406	447	+	.	.
scaffold522	subtractBed	intrn	497559	497842	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	497559	497842	301	+	.	.
scaffold522	subtractBed	intrn	498736	498797	.	-	.	Parent=CGI_10020333;
	scaffold522	TRF	Tandem_Repeat	498736	498797	124	+	.	.
scaffold522	subtractBed	intrn	556642	556986	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	556642	556986	172	-	.	.
scaffold522	subtractBed	intrn	555724	556293	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	555724	556293	62	-	.	.
scaffold522	subtractBed	intrn	556303	556833	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	556303	556833	194	-	.	.
scaffold522	subtractBed	intrn	556174	556293	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	556174	556293	70	-	.	.
scaffold522	subtractBed	intrn	555939	556103	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	555939	556103	90	-	.	.
scaffold522	subtractBed	intrn	556195	556488	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	556195	556488	119	-	.	.
scaffold522	subtractBed	intrn	555972	556106	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	555972	556106	93	-	.	.
scaffold522	subtractBed	intrn	555972	556139	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	555972	556139	67	-	.	.
scaffold522	subtractBed	intrn	555579	556106	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	555579	556106	45	-	.	.
scaffold522	subtractBed	intrn	557542	557715	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	557542	557715	40	-	.	.
scaffold522	subtractBed	intrn	557135	557476	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	557135	557476	192	-	.	.
scaffold522	subtractBed	intrn	557062	557181	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	557062	557181	44	-	.	.
scaffold522	subtractBed	intrn	556711	557076	.	+	.	Parent=CGI_10020338;
	scaffold522	WUBlastX	LTR_Gypsy	556711	557076	50	-	.	.
scaffold522	subtractBed	intrn	580147	580183	.	+	.	Parent=CGI_10020340;
	scaffold522	TRF	Tandem_Repeat	580147	580183	74	+	.	.
scaffold522	subtractBed	intrn	595061	595094	.	-	.	Parent=CGI_10020341;
	scaffold522	TRF	Tandem_Repeat	595061	595094	68	+	.	.
scaffold522	subtractBed	intrn	612811	612885	.	-	.	Parent=CGI_10020343;
	scaffold522	TRF	Tandem_Repeat	612811	612885	141	+	.	.
scaffold522	subtractBed	intrn	612811	612885	.	+	.	Parent=CGI_10020344;
	scaffold522	TRF	Tandem_Repeat	612811	612885	141	+	.	.
scaffold522	subtractBed	intrn	615820	615854	.	+	.	Parent=CGI_10020344;
	scaffold522	TRF	Tandem_Repeat	615820	615854	70	+	.	.
scaffold522	subtractBed	intrn	639394	639423	.	+	.	Parent=CGI_10020347;
	scaffold522	TRF	Tandem_Repeat	639394	639423	51	+	.	.
scaffold522	subtractBed	intrn	639927	639970	.	+	.	Parent=CGI_10020347;
	scaffold522	TRF	Tandem_Repeat	639927	639970	88	+	.	.
scaffold524	subtractBed	intrn	78576	78603	.	-	.	Parent=CGI_10016598;
	scaffold524	TRF	Tandem_Repeat	78576	78603	56	+	.	.
scaffold524	subtractBed	intrn	75683	75988	.	-	.	Parent=CGI_10016598;
	scaffold524	WUBlastX	DNA_Crypton	75683	75988	74	+	.	.
scaffold524	subtractBed	intrn	85917	85965	.	-	.	Parent=CGI_10016598;
	scaffold524	TRF	Tandem_Repeat	85917	85965	89	+	.	.
scaffold524	subtractBed	intrn	87553	87581	.	-	.	Parent=CGI_10016598;
	scaffold524	TRF	Tandem_Repeat	87553	87581	58	+	.	.
scaffold524	subtractBed	intrn	116251	116308	.	-	.	Parent=CGI_10016599;
	scaffold524	TRF	Tandem_Repeat	116251	116308	116	+	.	.
scaffold524	subtractBed	intrn	140821	140867	.	+	.	Parent=CGI_10016600;
	scaffold524	TRF	Tandem_Repeat	140821	140867	94	+	.	.
scaffold524	subtractBed	intrn	141463	141514	.	+	.	Parent=CGI_10016600;
	scaffold524	TRF	Tandem_Repeat	141463	141514	104	+	.	.
scaffold524	subtractBed	intrn	155131	155166	.	-	.	Parent=CGI_10016601;
	scaffold524	TRF	Tandem_Repeat	155131	155166	72	+	.	.
scaffold524	subtractBed	intrn	158413	158716	.	-	.	Parent=CGI_10016601;
	scaffold524	TRF	Tandem_Repeat	158413	158716	325	+	.	.
scaffold524	subtractBed	intrn	158413	158716	.	-	.	Parent=CGI_10016601;
	scaffold524	TRF	Tandem_Repeat	158413	158716	371	+	.	.
scaffold524	subtractBed	intrn	244700	244789	.	-	.	Parent=CGI_10016606;
	scaffold524	TRF	Tandem_Repeat	244700	244789	94	+	.	.
scaffold524	subtractBed	intrn	244802	244840	.	-	.	Parent=CGI_10016606;
	scaffold524	TRF	Tandem_Repeat	244802	244840	51	+	.	.
scaffold524	subtractBed	intrn	251008	251556	.	-	.	Parent=CGI_10016606;
	scaffold524	WUBlastX	DNA_Helitron	251008	251556	116	-	.	.
scaffold524	subtractBed	intrn	250932	251538	.	-	.	Parent=CGI_10016606;
	scaffold524	WUBlastX	RC_Helitron	250873	251538	86	-	.	.
scaffold524	subtractBed	intrn	450511	451125	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_L2	450511	451125	38	-	.	.
scaffold524	subtractBed	intrn	450511	450819	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_L2	450511	450819	133	-	.	.
scaffold524	subtractBed	intrn	453580	453951	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_CR1	453580	453951	39	-	.	.
scaffold524	subtractBed	intrn	453923	453973	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_CR1-L2	453923	453973	21	-	.	.
scaffold524	subtractBed	intrn	450514	451032	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_L2	450514	451032	46	-	.	.
scaffold524	subtractBed	intrn	453532	453888	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_CR1-L2	453532	453888	153	-	.	.
scaffold524	subtractBed	intrn	453245	453556	.	+	.	Parent=CGI_10016612;
	scaffold524	WUBlastX	LINE_CR1-L2	453245	453556	148	-	.	.
scaffold525	subtractBed	intrn	58891	59064	.	+	.	Parent=CGI_10008573;
	scaffold525	WUBlastX	DNA_IS4EU	58891	59064	23	+	.	.
scaffold525	subtractBed	intrn	58957	59064	.	+	.	Parent=CGI_10008573;
	scaffold525	WUBlastX	DNA_IS4EU	58957	59064	33	+	.	.
scaffold525	subtractBed	intrn	156860	156900	.	-	.	Parent=CGI_10008575;
	scaffold525	TRF	Tandem_Repeat	156860	156900	59	+	.	.
scaffold525	subtractBed	intrn	165519	165552	.	-	.	Parent=CGI_10008575;
	scaffold525	TRF	Tandem_Repeat	165519	165552	59	+	.	.
scaffold525	subtractBed	intrn	168400	168436	.	-	.	Parent=CGI_10008575;
	scaffold525	TRF	Tandem_Repeat	168400	168436	74	+	.	.
scaffold525	subtractBed	intrn	172936	173283	.	-	.	Parent=CGI_10008575;
	scaffold525	WUBlastX	LINE_L2	172936	173283	247	-	.	.
scaffold527	subtractBed	intrn	23066	24025	.	+	.	Parent=CGI_10015975;
	scaffold527	TRF	Tandem_Repeat	23066	24025	1277	+	.	.
scaffold527	subtractBed	intrn	35033	35118	.	+	.	Parent=CGI_10015975;
	scaffold527	TRF	Tandem_Repeat	35033	35118	140	+	.	.
scaffold527	subtractBed	intrn	37265	38044	.	+	.	Parent=CGI_10015975;
	scaffold527	TRF	Tandem_Repeat	37265	38044	895	+	.	.
scaffold527	subtractBed	intrn	119714	119872	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	119714	119872	282	+	.	.
scaffold527	subtractBed	intrn	123205	123239	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	123205	123239	70	+	.	.
scaffold527	subtractBed	intrn	136829	137178	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	136829	137214	677	+	.	.
scaffold527	subtractBed	intrn	145425	145647	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	145425	145649	378	+	.	.
scaffold527	subtractBed	intrn	148905	148974	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	148905	148974	122	+	.	.
scaffold527	subtractBed	intrn	149177	149202	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	149177	149202	52	+	.	.
scaffold527	subtractBed	intrn	151789	151829	.	-	.	Parent=CGI_10015978;
	scaffold527	TRF	Tandem_Repeat	151789	151829	82	+	.	.
scaffold527	subtractBed	intrn	173990	174050	.	+	.	Parent=CGI_10015979;
	scaffold527	TRF	Tandem_Repeat	173990	174050	50	+	.	.
scaffold527	subtractBed	intrn	175086	175137	.	+	.	Parent=CGI_10015979;
	scaffold527	TRF	Tandem_Repeat	175086	175137	61	+	.	.
scaffold527	subtractBed	intrn	300761	300851	.	-	.	Parent=CGI_10015982;
	scaffold527	TRF	Tandem_Repeat	300761	300851	146	+	.	.
scaffold527	subtractBed	intrn	342322	342660	.	+	.	Parent=CGI_10015985;
	scaffold527	TRF	Tandem_Repeat	342322	342660	456	+	.	.
scaffold527	subtractBed	intrn	344865	345612	.	+	.	Parent=CGI_10015985;
	scaffold527	TRF	Tandem_Repeat	344865	345612	894	+	.	.
scaffold527	subtractBed	intrn	358365	358499	.	+	.	Parent=CGI_10015987;
	scaffold527	WUBlastX	DNA_hAT-hATw	358365	358499	24	-	.	.
scaffold527	subtractBed	intrn	358665	361106	.	+	.	Parent=CGI_10015987;
	scaffold527	WUBlastX	DNA_hAT-hATw	358665	361106	661	-	.	.
scaffold527	subtractBed	intrn	389439	390423	.	-	.	Parent=CGI_10015990;
	scaffold527	TRF	Tandem_Repeat	389439	390423	1589	+	.	.
scaffold527	subtractBed	intrn	396519	396576	.	+	.	Parent=CGI_10015991;
	scaffold527	TRF	Tandem_Repeat	396519	396576	116	+	.	.
scaffold527	subtractBed	intrn	408080	408117	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	408080	408117	67	+	.	.
scaffold527	subtractBed	intrn	408322	409245	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	408322	409245	1309	+	.	.
scaffold527	subtractBed	intrn	409876	409955	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	409876	409955	128	+	.	.
scaffold527	subtractBed	intrn	410628	410702	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	410628	410702	105	+	.	.
scaffold527	subtractBed	intrn	413148	413280	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	413148	413280	212	+	.	.
scaffold527	subtractBed	intrn	415418	415451	.	-	.	Parent=CGI_10015992;
	scaffold527	TRF	Tandem_Repeat	415418	415451	68	+	.	.
scaffold53	subtractBed	intrn	69430	69455	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	69430	69455	52	+	.	.
scaffold53	subtractBed	intrn	84576	84640	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	84576	84640	130	+	.	.
scaffold53	subtractBed	intrn	87537	87594	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	87537	87594	116	+	.	.
scaffold53	subtractBed	intrn	89959	90014	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	89959	90014	112	+	.	.
scaffold53	subtractBed	intrn	91904	91952	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	91904	91952	80	+	.	.
scaffold53	subtractBed	intrn	106728	106803	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	106728	106803	152	+	.	.
scaffold53	subtractBed	intrn	111618	111907	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	111618	111907	102	+	.	.
scaffold53	subtractBed	intrn	111587	111981	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	111587	111981	745	+	.	.
scaffold53	subtractBed	intrn	111984	114047	.	+	.	Parent=CGI_10026649;
	scaffold53	WUBlastX	LINE_RTE-X	111984	114047	851	+	.	.
scaffold53	subtractBed	intrn	112083	114446	.	+	.	Parent=CGI_10026649;
	scaffold53	WUBlastX	LINE_RTE-X	112083	114446	585	+	.	.
scaffold53	subtractBed	intrn	116615	116647	.	+	.	Parent=CGI_10026649;
	scaffold53	TRF	Tandem_Repeat	116615	116647	66	+	.	.
scaffold53	subtractBed	intrn	140529	140586	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	140529	140586	116	+	.	.
scaffold53	subtractBed	intrn	145838	146088	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	145838	146088	394	+	.	.
scaffold53	subtractBed	intrn	150795	150858	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	150795	150858	101	+	.	.
scaffold53	subtractBed	intrn	152989	153042	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	152989	153042	101	+	.	.
scaffold53	subtractBed	intrn	153868	153905	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	153868	153905	53	+	.	.
scaffold53	subtractBed	intrn	163143	163181	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	163143	163181	71	+	.	.
scaffold53	subtractBed	intrn	163514	163543	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	163514	163543	60	+	.	.
scaffold53	subtractBed	intrn	165146	165179	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	165146	165179	68	+	.	.
scaffold53	subtractBed	intrn	166393	166454	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	166393	166454	56	+	.	.
scaffold53	subtractBed	intrn	166366	166473	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	166366	166473	175	+	.	.
scaffold53	subtractBed	intrn	167296	167362	.	+	.	Parent=CGI_10026650;
	scaffold53	TRF	Tandem_Repeat	167296	167362	134	+	.	.
scaffold53	subtractBed	intrn	225552	225588	.	-	.	Parent=CGI_10026654;
	scaffold53	TRF	Tandem_Repeat	225552	225588	56	+	.	.
scaffold53	subtractBed	intrn	230935	230988	.	-	.	Parent=CGI_10026654;
	scaffold53	TRF	Tandem_Repeat	230935	230988	101	+	.	.
scaffold53	subtractBed	intrn	268793	268829	.	+	.	Parent=CGI_10026656;
	scaffold53	TRF	Tandem_Repeat	268793	268829	74	+	.	.
scaffold53	subtractBed	intrn	357035	357070	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	357035	357070	72	+	.	.
scaffold53	subtractBed	intrn	360108	360153	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	360108	360153	92	+	.	.
scaffold53	subtractBed	intrn	363402	363457	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	363402	363457	105	+	.	.
scaffold53	subtractBed	intrn	364660	364693	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	364660	364693	61	+	.	.
scaffold53	subtractBed	intrn	371208	371781	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	371208	371781	421	+	.	.
scaffold53	subtractBed	intrn	372889	372923	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	372889	372923	61	+	.	.
scaffold53	subtractBed	intrn	374096	374127	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	374096	374127	57	+	.	.
scaffold53	subtractBed	intrn	375839	375926	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	375839	375926	54	+	.	.
scaffold53	subtractBed	intrn	375827	375913	.	+	.	Parent=CGI_10026658;
	scaffold53	TRF	Tandem_Repeat	375827	375913	86	+	.	.
scaffold53	subtractBed	intrn	385398	385584	.	+	.	Parent=CGI_10026659;
	scaffold53	TRF	Tandem_Repeat	385398	385584	95	+	.	.
scaffold53	subtractBed	intrn	388282	388370	.	+	.	Parent=CGI_10026659;
	scaffold53	TRF	Tandem_Repeat	388282	388370	90	+	.	.
scaffold53	subtractBed	intrn	388307	388370	.	+	.	Parent=CGI_10026659;
	scaffold53	TRF	Tandem_Repeat	388307	388370	58	+	.	.
scaffold53	subtractBed	intrn	388443	388503	.	+	.	Parent=CGI_10026659;
	scaffold53	TRF	Tandem_Repeat	388443	388503	50	+	.	.
scaffold53	subtractBed	intrn	421949	422086	.	+	.	Parent=CGI_10026663;
	scaffold53	TRF	Tandem_Repeat	421949	422086	129	+	.	.
scaffold53	subtractBed	intrn	427725	427862	.	+	.	Parent=CGI_10026663;
	scaffold53	TRF	Tandem_Repeat	427725	427862	129	+	.	.
scaffold53	subtractBed	intrn	471918	471954	.	-	.	Parent=CGI_10026665;
	scaffold53	TRF	Tandem_Repeat	471918	471954	74	+	.	.
scaffold53	subtractBed	intrn	545958	545988	.	+	.	Parent=CGI_10026671;
	scaffold53	TRF	Tandem_Repeat	545958	545988	62	+	.	.
scaffold53	subtractBed	intrn	547883	547993	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1-Tx1	547883	547993	49	-	.	.
scaffold53	subtractBed	intrn	548164	548445	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1	548164	548445	72	-	.	.
scaffold53	subtractBed	intrn	548185	548358	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1-Tx1	548185	548358	89	-	.	.
scaffold53	subtractBed	intrn	547748	547969	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1-Tx1	547748	547969	27	-	.	.
scaffold53	subtractBed	intrn	547998	548087	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1	547998	548087	38	-	.	.
scaffold53	subtractBed	intrn	547805	547993	.	+	.	Parent=CGI_10026671;
	scaffold53	WUBlastX	LINE_L1-Tx1	547805	547993	28	-	.	.
scaffold53	subtractBed	intrn	579420	580415	.	+	.	Parent=CGI_10026671;
	scaffold53	TRF	Tandem_Repeat	579420	580415	1019	+	.	.
scaffold53	subtractBed	intrn	585211	585236	.	+	.	Parent=CGI_10026671;
	scaffold53	TRF	Tandem_Repeat	585211	585236	52	+	.	.
scaffold53	subtractBed	intrn	620703	620785	.	+	.	Parent=CGI_10026674;
	scaffold53	TRF	Tandem_Repeat	620703	620785	166	+	.	.
scaffold53	subtractBed	intrn	639437	639496	.	+	.	Parent=CGI_10026676;
	scaffold53	TRF	Tandem_Repeat	639437	639496	120	+	.	.
scaffold53	subtractBed	intrn	649474	649521	.	-	.	Parent=CGI_10026678;
	scaffold53	TRF	Tandem_Repeat	649474	649521	60	+	.	.
scaffold53	subtractBed	intrn	655619	655788	.	-	.	Parent=CGI_10026678;
	scaffold53	TRF	Tandem_Repeat	655619	655788	243	+	.	.
scaffold53	subtractBed	intrn	656637	656868	.	-	.	Parent=CGI_10026678;
	scaffold53	TRF	Tandem_Repeat	656637	656868	270	+	.	.
scaffold53	subtractBed	intrn	696641	696687	.	+	.	Parent=CGI_10026680;
	scaffold53	TRF	Tandem_Repeat	696641	696687	94	+	.	.
scaffold53	subtractBed	intrn	724684	724733	.	-	.	Parent=CGI_10026682;
	scaffold53	TRF	Tandem_Repeat	724684	724733	82	+	.	.
scaffold53	subtractBed	intrn	731430	731478	.	-	.	Parent=CGI_10026682;
	scaffold53	TRF	Tandem_Repeat	731430	731478	71	+	.	.
scaffold53	subtractBed	intrn	725812	725994	.	-	.	Parent=CGI_10026682;
	scaffold53	WUBlastX	LINE_RTE-X	725812	725994	106	-	.	.
scaffold53	subtractBed	intrn	743780	743814	.	+	.	Parent=CGI_10026683;
	scaffold53	TRF	Tandem_Repeat	743780	743814	70	+	.	.
scaffold53	subtractBed	intrn	781086	781135	.	+	.	Parent=CGI_10026685;
	scaffold53	TRF	Tandem_Repeat	781086	781135	100	+	.	.
scaffold53	subtractBed	intrn	860900	860956	.	-	.	Parent=CGI_10026689;
	scaffold53	TRF	Tandem_Repeat	860900	860956	114	+	.	.
scaffold53	subtractBed	intrn	872702	872769	.	-	.	Parent=CGI_10026690;
	scaffold53	TRF	Tandem_Repeat	872702	872769	118	+	.	.
scaffold53	subtractBed	intrn	877412	877453	.	-	.	Parent=CGI_10026690;
	scaffold53	TRF	Tandem_Repeat	877412	877453	84	+	.	.
scaffold53	subtractBed	intrn	879010	879060	.	-	.	Parent=CGI_10026690;
	scaffold53	TRF	Tandem_Repeat	879010	879060	102	+	.	.
scaffold53	subtractBed	intrn	985872	986778	.	-	.	Parent=CGI_10026695;
	scaffold53	TRF	Tandem_Repeat	985872	986778	1109	+	.	.
scaffold53	subtractBed	intrn	988174	988215	.	-	.	Parent=CGI_10026695;
	scaffold53	TRF	Tandem_Repeat	988174	988215	59	+	.	.
scaffold53	subtractBed	intrn	1006240	1006277	.	-	.	Parent=CGI_10026695;
	scaffold53	TRF	Tandem_Repeat	1006240	1006277	76	+	.	.
scaffold53	subtractBed	intrn	1003789	1004352	.	-	.	Parent=CGI_10026695;
	scaffold53	WUBlastX	DNA_TcMar-Fot1	1003789	1004352	365	+	.	.
scaffold53	subtractBed	intrn	1004300	1005121	.	-	.	Parent=CGI_10026695;
	scaffold53	WUBlastX	DNA_TcMar-Fot1	1004300	1005121	134	+	.	.
scaffold53	subtractBed	intrn	1004333	1004989	.	-	.	Parent=CGI_10026695;
	scaffold53	WUBlastX	DNA_TcMar-Fot1	1004333	1004989	449	+	.	.
scaffold53	subtractBed	intrn	1094558	1094622	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1094558	1094622	130	+	.	.
scaffold53	subtractBed	intrn	1099611	1099648	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1099611	1099648	76	+	.	.
scaffold53	subtractBed	intrn	1100345	1100392	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1100345	1100392	60	+	.	.
scaffold53	subtractBed	intrn	1100345	1100389	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1100345	1100389	81	+	.	.
scaffold53	subtractBed	intrn	1103508	1103779	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1103508	1103779	436	+	.	.
scaffold53	subtractBed	intrn	1106184	1108489	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1106184	1108489	2814	+	.	.
scaffold53	subtractBed	intrn	1109119	1109245	.	+	.	Parent=CGI_10026698;
	scaffold53	TRF	Tandem_Repeat	1109119	1109245	254	+	.	.
scaffold53	subtractBed	intrn	1125964	1128489	.	+	.	Parent=CGI_10026699;
	scaffold53	WUBlastX	LINE_RTE-X	1125964	1128489	808	+	.	.
scaffold53	subtractBed	intrn	1138179	1138203	.	+	.	Parent=CGI_10026699;
	scaffold53	TRF	Tandem_Repeat	1138179	1138203	50	+	.	.
scaffold53	subtractBed	intrn	1155517	1155648	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1155517	1155648	54	+	.	.
scaffold53	subtractBed	intrn	1154744	1155301	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1154744	1155301	216	+	.	.
scaffold53	subtractBed	intrn	1155538	1155711	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1155538	1155711	93	+	.	.
scaffold53	subtractBed	intrn	1156241	1156813	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1156241	1156813	160	+	.	.
scaffold53	subtractBed	intrn	1157473	1157916	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1157473	1157916	405	-	.	.
scaffold53	subtractBed	intrn	1157925	1158461	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1157925	1158461	236	-	.	.
scaffold53	subtractBed	intrn	1158658	1158930	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_IS4EU	1158658	1158930	111	-	.	.
scaffold53	subtractBed	intrn	1161171	1161596	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Sola	1161171	1161596	230	-	.	.
scaffold53	subtractBed	intrn	1161679	1161765	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Sola	1161679	1161765	20	-	.	.
scaffold53	subtractBed	intrn	1160613	1161602	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Sola	1160613	1161602	182	-	.	.
scaffold53	subtractBed	intrn	1160547	1160816	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Sola	1160547	1160816	136	-	.	.
scaffold53	subtractBed	intrn	1158589	1158738	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Kolobok-IS4	1158589	1158738	32	-	.	.
scaffold53	subtractBed	intrn	1161084	1161605	.	+	.	Parent=CGI_10026702;
	scaffold53	WUBlastX	DNA_Sola	1161084	1161605	230	-	.	.
scaffold531	subtractBed	intrn	7238	7634	.	+	.	Parent=CGI_10014485;
	scaffold531	TRF	Tandem_Repeat	7238	7634	539	+	.	.
scaffold531	subtractBed	intrn	7238	7634	.	+	.	Parent=CGI_10014485;
	scaffold531	TRF	Tandem_Repeat	7238	7634	600	+	.	.
scaffold531	subtractBed	intrn	25523	25927	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	25523	26266	332	-	.	.
scaffold531	subtractBed	intrn	25026	25514	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	25026	25514	195	-	.	.
scaffold531	subtractBed	intrn	25514	25927	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	25514	26137	358	-	.	.
scaffold531	subtractBed	intrn	23411	23659	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	22982	23659	299	-	.	.
scaffold531	subtractBed	intrn	26386	26589	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	26386	26589	68	-	.	.
scaffold531	subtractBed	intrn	26356	26691	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	26356	26691	61	-	.	.
scaffold531	subtractBed	intrn	26386	26550	.	-	.	Parent=CGI_10014486;
	scaffold531	WUBlastX	DNA_Academ	26386	26550	125	-	.	.
scaffold531	subtractBed	intrn	49370	49445	.	+	.	Parent=CGI_10014488;
	scaffold531	TRF	Tandem_Repeat	49370	49445	152	+	.	.
scaffold531	subtractBed	intrn	60711	60736	.	-	.	Parent=CGI_10014489;
	scaffold531	TRF	Tandem_Repeat	60711	60736	52	+	.	.
scaffold531	subtractBed	intrn	82600	82645	.	-	.	Parent=CGI_10014490;
	scaffold531	TRF	Tandem_Repeat	82600	82645	58	+	.	.
scaffold531	subtractBed	intrn	97583	97619	.	-	.	Parent=CGI_10014490;
	scaffold531	TRF	Tandem_Repeat	97583	97619	74	+	.	.
scaffold531	subtractBed	intrn	214886	214967	.	-	.	Parent=CGI_10014497;
	scaffold531	TRF	Tandem_Repeat	214886	214967	128	+	.	.
scaffold531	subtractBed	intrn	243718	243898	.	-	.	Parent=CGI_10014502;
	scaffold531	TRF	Tandem_Repeat	243718	243898	83	+	.	.
scaffold531	subtractBed	intrn	243716	243875	.	-	.	Parent=CGI_10014502;
	scaffold531	TRF	Tandem_Repeat	243716	243875	95	+	.	.
scaffold531	subtractBed	intrn	261681	262441	.	-	.	Parent=CGI_10014503;
	scaffold531	TRF	Tandem_Repeat	261681	262441	956	+	.	.
scaffold531	subtractBed	intrn	268807	268887	.	-	.	Parent=CGI_10014503;
	scaffold531	TRF	Tandem_Repeat	268807	268887	162	+	.	.
scaffold531	subtractBed	intrn	271097	271155	.	-	.	Parent=CGI_10014503;
	scaffold531	TRF	Tandem_Repeat	271097	271155	118	+	.	.
scaffold532	subtractBed	intrn	7985	8066	.	-	.	Parent=CGI_10012519;
	scaffold532	TRF	Tandem_Repeat	7985	8066	164	+	.	.
scaffold532	subtractBed	intrn	10139	10176	.	-	.	Parent=CGI_10012519;
	scaffold532	TRF	Tandem_Repeat	10139	10176	67	+	.	.
scaffold532	subtractBed	intrn	16373	16423	.	-	.	Parent=CGI_10012519;
	scaffold532	TRF	Tandem_Repeat	16373	16423	93	+	.	.
scaffold532	subtractBed	intrn	42905	43415	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	42905	43415	806	+	.	.
scaffold532	subtractBed	intrn	43621	43770	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	43621	43770	205	+	.	.
scaffold532	subtractBed	intrn	44619	44849	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	44619	44849	354	+	.	.
scaffold532	subtractBed	intrn	45305	46705	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	45305	46705	2349	+	.	.
scaffold532	subtractBed	intrn	45306	46708	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	45306	46708	2382	+	.	.
scaffold532	subtractBed	intrn	47081	47488	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	47081	47488	238	+	.	.
scaffold532	subtractBed	intrn	47171	47488	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	47171	47488	262	+	.	.
scaffold532	subtractBed	intrn	47172	47239	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	47172	47239	55	+	.	.
scaffold532	subtractBed	intrn	49607	50013	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	49607	50013	642	+	.	.
scaffold532	subtractBed	intrn	51369	52241	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	51369	52241	1431	+	.	.
scaffold532	subtractBed	intrn	52503	52741	.	+	.	Parent=CGI_10012520;
	scaffold532	TRF	Tandem_Repeat	52503	52741	218	+	.	.
scaffold532	subtractBed	intrn	103108	103174	.	+	.	Parent=CGI_10012522;
	scaffold532	TRF	Tandem_Repeat	103108	103174	88	+	.	.
scaffold532	subtractBed	intrn	110811	110856	.	+	.	Parent=CGI_10012522;
	scaffold532	TRF	Tandem_Repeat	110811	110856	65	+	.	.
scaffold532	subtractBed	intrn	124827	125144	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	124827	125144	451	+	.	.
scaffold532	subtractBed	intrn	125153	125442	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	125153	125442	158	+	.	.
scaffold532	subtractBed	intrn	125071	125551	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	125071	125551	840	+	.	.
scaffold532	subtractBed	intrn	124961	125497	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	124961	125497	216	+	.	.
scaffold532	subtractBed	intrn	126069	126192	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	126069	126192	194	+	.	.
scaffold532	subtractBed	intrn	137109	137428	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	137109	137428	391	+	.	.
scaffold532	subtractBed	intrn	137109	137471	.	-	.	Parent=CGI_10012525;
	scaffold532	TRF	Tandem_Repeat	137109	137471	418	+	.	.
scaffold532	subtractBed	intrn	161810	162121	.	-	.	Parent=CGI_10012528;
	scaffold532	TRF	Tandem_Repeat	161810	162121	178	+	.	.
scaffold532	subtractBed	intrn	161810	162119	.	-	.	Parent=CGI_10012528;
	scaffold532	TRF	Tandem_Repeat	161810	162119	273	+	.	.
scaffold532	subtractBed	intrn	162552	162816	.	-	.	Parent=CGI_10012528;
	scaffold532	TRF	Tandem_Repeat	162552	162816	125	+	.	.
scaffold532	subtractBed	intrn	162548	162816	.	-	.	Parent=CGI_10012528;
	scaffold532	TRF	Tandem_Repeat	162548	162816	238	+	.	.
scaffold532	subtractBed	intrn	166086	166289	.	-	.	Parent=CGI_10012528;
	scaffold532	WUBlastX	LINE_RTE-X	166086	166289	99	+	.	.
scaffold532	subtractBed	intrn	185917	186179	.	-	.	Parent=CGI_10012531;
	scaffold532	TRF	Tandem_Repeat	185917	186179	445	+	.	.
scaffold532	subtractBed	intrn	186207	186300	.	-	.	Parent=CGI_10012531;
	scaffold532	TRF	Tandem_Repeat	186207	186300	66	+	.	.
scaffold532	subtractBed	intrn	186179	186387	.	-	.	Parent=CGI_10012531;
	scaffold532	TRF	Tandem_Repeat	186179	186387	370	+	.	.
scaffold532	subtractBed	intrn	188915	189008	.	-	.	Parent=CGI_10012531;
	scaffold532	TRF	Tandem_Repeat	188915	189008	52	+	.	.
scaffold532	subtractBed	intrn	188899	189165	.	-	.	Parent=CGI_10012531;
	scaffold532	TRF	Tandem_Repeat	188899	189165	435	+	.	.
scaffold532	subtractBed	intrn	196765	197418	.	+	.	Parent=CGI_10012532;
	scaffold532	TRF	Tandem_Repeat	196765	197418	859	+	.	.
scaffold532	subtractBed	intrn	207777	208601	.	+	.	Parent=CGI_10012532;
	scaffold532	TRF	Tandem_Repeat	207777	208601	1019	+	.	.
scaffold532	subtractBed	intrn	211157	211182	.	+	.	Parent=CGI_10012532;
	scaffold532	TRF	Tandem_Repeat	211157	211182	52	+	.	.
scaffold532	subtractBed	intrn	214976	216844	.	+	.	Parent=CGI_10012532;
	scaffold532	TRF	Tandem_Repeat	214976	216844	2696	+	.	.
scaffold532	subtractBed	intrn	285626	286007	.	-	.	Parent=CGI_10012533;
	scaffold532	TRF	Tandem_Repeat	285626	286007	415	+	.	.
scaffold532	subtractBed	intrn	285751	285883	.	-	.	Parent=CGI_10012533;
	scaffold532	TRF	Tandem_Repeat	285751	285883	92	+	.	.
scaffold532	subtractBed	intrn	278837	281425	.	-	.	Parent=CGI_10012533;
	scaffold532	WUBlastX	RC_Helitron	278837	281425	1365	-	.	.
scaffold532	subtractBed	intrn	281000	284056	.	-	.	Parent=CGI_10012533;
	scaffold532	WUBlastX	RC_Helitron	281000	284056	1892	-	.	.
scaffold532	subtractBed	intrn	279344	284014	.	-	.	Parent=CGI_10012533;
	scaffold532	WUBlastX	RC_Helitron	279344	284014	1444	-	.	.
scaffold533	subtractBed	intrn	82816	84284	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	82816	84284	1806	+	.	.
scaffold533	subtractBed	intrn	84280	84367	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	84280	84367	59	+	.	.
scaffold533	subtractBed	intrn	84684	85024	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	84684	85024	371	+	.	.
scaffold533	subtractBed	intrn	85020	85107	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	85020	85107	59	+	.	.
scaffold533	subtractBed	intrn	86154	86886	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	86154	86886	851	+	.	.
scaffold533	subtractBed	intrn	95659	95833	.	-	.	Parent=CGI_10005555;
	scaffold533	TRF	Tandem_Repeat	95659	95833	350	+	.	.
scaffold533	subtractBed	intrn	98043	98252	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L1-Tx1	98043	98252	55	-	.	.
scaffold533	subtractBed	intrn	91309	91344	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L1	91309	91344	20	+	.	.
scaffold533	subtractBed	intrn	92328	94181	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L2	92328	94181	1207	+	.	.
scaffold533	subtractBed	intrn	96089	96688	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_CR1-L2	96089	96688	201	+	.	.
scaffold533	subtractBed	intrn	95960	96691	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L2	95960	96691	94	+	.	.
scaffold533	subtractBed	intrn	92187	92999	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_DRE	92187	92999	64	+	.	.
scaffold533	subtractBed	intrn	96194	97054	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L2	96194	97054	449	+	.	.
scaffold533	subtractBed	intrn	98254	98535	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L1-Tx1	98254	98535	32	-	.	.
scaffold533	subtractBed	intrn	98269	98457	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L1	98269	98457	67	-	.	.
scaffold533	subtractBed	intrn	98266	98493	.	-	.	Parent=CGI_10005555;
	scaffold533	WUBlastX	LINE_L1-Tx1	98266	98493	44	-	.	.
scaffold533	subtractBed	intrn	116784	117079	.	+	.	Parent=CGI_10005556;
	scaffold533	TRF	Tandem_Repeat	116784	117079	325	+	.	.
scaffold533	subtractBed	intrn	128084	128167	.	+	.	Parent=CGI_10005556;
	scaffold533	TRF	Tandem_Repeat	128084	128167	159	+	.	.
scaffold534	subtractBed	intrn	4294	4326	.	-	.	Parent=CGI_10005162;
	scaffold534	TRF	Tandem_Repeat	4294	4326	57	+	.	.
scaffold534	subtractBed	intrn	3639	3821	.	-	.	Parent=CGI_10005162;
	scaffold534	WUBlastX	DNA_TcMar-Marin	3639	3821	51	+	.	.
scaffold534	subtractBed	intrn	71444	72352	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	71444	72352	114	-	.	.
scaffold534	subtractBed	intrn	69574	70653	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy-Cigr	69574	70653	447	-	.	.
scaffold534	subtractBed	intrn	67151	67840	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_ERV1	67151	67840	97	-	.	.
scaffold534	subtractBed	intrn	67906	68277	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	67906	68277	68	-	.	.
scaffold534	subtractBed	intrn	71501	72514	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy-Cigr	71501	72514	59	-	.	.
scaffold534	subtractBed	intrn	67864	68220	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	67864	68220	113	-	.	.
scaffold534	subtractBed	intrn	70837	71496	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	70837	71496	563	-	.	.
scaffold534	subtractBed	intrn	69532	69690	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	69532	69690	32	-	.	.
scaffold534	subtractBed	intrn	67870	68166	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy-Cigr	67870	68166	214	-	.	.
scaffold534	subtractBed	intrn	70072	70656	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	70072	70656	490	-	.	.
scaffold534	subtractBed	intrn	73828	74344	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LINE_L1-Tx1	73828	74352	168	+	.	.
scaffold534	subtractBed	intrn	74255	74344	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LINE_L1-Tx1	74255	75427	139	+	.	.
scaffold534	subtractBed	intrn	67262	67864	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	67262	67864	341	-	.	.
scaffold534	subtractBed	intrn	70756	71541	.	+	.	Parent=CGI_10005164;
	scaffold534	WUBlastX	LTR_Gypsy	70756	71541	309	-	.	.
scaffold535	subtractBed	intrn	2812	3006	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	2812	3006	28	+	.	.
scaffold535	subtractBed	intrn	2848	2949	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	2848	2949	30	+	.	.
scaffold535	subtractBed	intrn	3215	3352	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	3215	3352	20	+	.	.
scaffold535	subtractBed	intrn	3227	3325	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	3227	3325	23	+	.	.
scaffold535	subtractBed	intrn	4266	4967	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	4266	4967	372	-	.	.
scaffold535	subtractBed	intrn	3832	3890	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	3753	3890	59	+	.	.
scaffold535	subtractBed	intrn	4134	5012	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	4134	5012	204	-	.	.
scaffold535	subtractBed	intrn	4002	4181	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	4002	4181	50	+	.	.
scaffold535	subtractBed	intrn	3963	4175	.	+	.	Parent=CGI_10020280;
	scaffold535	WUBlastX	DNA_IS4EU	3963	4175	24	+	.	.
scaffold535	subtractBed	intrn	39920	39963	.	-	.	Parent=CGI_10020281;
	scaffold535	TRF	Tandem_Repeat	39920	39963	88	+	.	.
scaffold535	subtractBed	intrn	91613	91674	.	+	.	Parent=CGI_10020282;
	scaffold535	TRF	Tandem_Repeat	91613	91674	54	+	.	.
scaffold535	subtractBed	intrn	91614	91655	.	+	.	Parent=CGI_10020282;
	scaffold535	TRF	Tandem_Repeat	91614	91655	50	+	.	.
scaffold535	subtractBed	intrn	91613	91674	.	+	.	Parent=CGI_10020282;
	scaffold535	TRF	Tandem_Repeat	91613	91674	54	+	.	.
scaffold535	subtractBed	intrn	111718	111769	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	111718	111769	104	+	.	.
scaffold535	subtractBed	intrn	115194	116097	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	115194	116097	1016	+	.	.
scaffold535	subtractBed	intrn	116865	117125	.	+	.	Parent=CGI_10020283;
	scaffold535	WUBlastX	DNA_TcMar-Tc1	116865	117125	50	+	.	.
scaffold535	subtractBed	intrn	116665	116853	.	+	.	Parent=CGI_10020283;
	scaffold535	WUBlastX	DNA_TcMar-Tc1	116665	116853	42	+	.	.
scaffold535	subtractBed	intrn	116844	116948	.	+	.	Parent=CGI_10020283;
	scaffold535	WUBlastX	DNA_TcMar-Tc1	116844	116948	44	+	.	.
scaffold535	subtractBed	intrn	117066	117137	.	+	.	Parent=CGI_10020283;
	scaffold535	WUBlastX	DNA_TcMar-Tc1	117066	117137	51	+	.	.
scaffold535	subtractBed	intrn	123225	123268	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	123225	123268	88	+	.	.
scaffold535	subtractBed	intrn	142716	142757	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	142716	142757	52	+	.	.
scaffold535	subtractBed	intrn	142930	145080	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	142930	145080	2402	+	.	.
scaffold535	subtractBed	intrn	154350	154389	.	+	.	Parent=CGI_10020283;
	scaffold535	TRF	Tandem_Repeat	154350	154389	50	+	.	.
scaffold535	subtractBed	intrn	163238	163271	.	+	.	Parent=CGI_10020284;
	scaffold535	TRF	Tandem_Repeat	163238	163271	52	+	.	.
scaffold535	subtractBed	intrn	163459	163525	.	+	.	Parent=CGI_10020284;
	scaffold535	TRF	Tandem_Repeat	163459	163525	80	+	.	.
scaffold535	subtractBed	intrn	165614	169306	.	+	.	Parent=CGI_10020284;
	scaffold535	WUBlastX	LINE_L1-Tx1	165614	169306	1353	+	.	.
scaffold535	subtractBed	intrn	166325	169327	.	+	.	Parent=CGI_10020284;
	scaffold535	WUBlastX	LINE_L1-Tx1	166325	169327	1379	+	.	.
scaffold535	subtractBed	intrn	177133	177302	.	+	.	Parent=CGI_10020284;
	scaffold535	TRF	Tandem_Repeat	177133	177302	189	+	.	.
scaffold535	subtractBed	intrn	205910	206273	.	-	.	Parent=CGI_10020285;
	scaffold535	TRF	Tandem_Repeat	205910	206273	577	+	.	.
scaffold535	subtractBed	intrn	215332	215407	.	+	.	Parent=CGI_10020286;
	scaffold535	TRF	Tandem_Repeat	215332	215407	152	+	.	.
scaffold535	subtractBed	intrn	217222	217255	.	+	.	Parent=CGI_10020286;
	scaffold535	TRF	Tandem_Repeat	217222	217255	68	+	.	.
scaffold535	subtractBed	intrn	248933	248988	.	-	.	Parent=CGI_10020288;
	scaffold535	TRF	Tandem_Repeat	248933	248988	112	+	.	.
scaffold535	subtractBed	intrn	328232	328272	.	+	.	Parent=CGI_10020290;
	scaffold535	TRF	Tandem_Repeat	328232	328272	82	+	.	.
scaffold535	subtractBed	intrn	329680	329983	.	+	.	Parent=CGI_10020290;
	scaffold535	TRF	Tandem_Repeat	329680	329983	365	+	.	.
scaffold535	subtractBed	intrn	335115	335158	.	+	.	Parent=CGI_10020290;
	scaffold535	TRF	Tandem_Repeat	335115	335158	88	+	.	.
scaffold535	subtractBed	intrn	351972	352010	.	+	.	Parent=CGI_10020290;
	scaffold535	TRF	Tandem_Repeat	351972	352010	78	+	.	.
scaffold535	subtractBed	intrn	453809	454131	.	+	.	Parent=CGI_10020294;
	scaffold535	TRF	Tandem_Repeat	453809	454131	405	+	.	.
scaffold535	subtractBed	intrn	461242	461454	.	-	.	Parent=CGI_10020295;
	scaffold535	TRF	Tandem_Repeat	461207	461454	392	+	.	.
scaffold535	subtractBed	intrn	463477	463531	.	-	.	Parent=CGI_10020295;
	scaffold535	TRF	Tandem_Repeat	463477	463531	67	+	.	.
scaffold535	subtractBed	intrn	463494	463539	.	-	.	Parent=CGI_10020295;
	scaffold535	TRF	Tandem_Repeat	463494	463539	58	+	.	.
scaffold535	subtractBed	intrn	472548	472583	.	-	.	Parent=CGI_10020295;
	scaffold535	TRF	Tandem_Repeat	472548	472583	72	+	.	.
scaffold535	subtractBed	intrn	473087	473216	.	-	.	Parent=CGI_10020295;
	scaffold535	TRF	Tandem_Repeat	473087	473216	233	+	.	.
scaffold535	subtractBed	intrn	486392	486472	.	+	.	Parent=CGI_10020296;
	scaffold535	TRF	Tandem_Repeat	486392	486472	162	+	.	.
scaffold535	subtractBed	intrn	486538	486590	.	+	.	Parent=CGI_10020296;
	scaffold535	TRF	Tandem_Repeat	486538	486590	99	+	.	.
scaffold535	subtractBed	intrn	486785	486819	.	+	.	Parent=CGI_10020296;
	scaffold535	TRF	Tandem_Repeat	486785	486819	70	+	.	.
scaffold535	subtractBed	intrn	501435	501478	.	-	.	Parent=CGI_10020297;
	scaffold535	TRF	Tandem_Repeat	501435	501478	88	+	.	.
scaffold535	subtractBed	intrn	503863	503898	.	-	.	Parent=CGI_10020297;
	scaffold535	TRF	Tandem_Repeat	503863	503898	72	+	.	.
scaffold535	subtractBed	intrn	506245	506522	.	-	.	Parent=CGI_10020297;
	scaffold535	TRF	Tandem_Repeat	506245	506522	439	+	.	.
scaffold535	subtractBed	intrn	506220	506528	.	-	.	Parent=CGI_10020297;
	scaffold535	TRF	Tandem_Repeat	506220	506528	438	+	.	.
scaffold535	subtractBed	intrn	506816	508193	.	-	.	Parent=CGI_10020297;
	scaffold535	TRF	Tandem_Repeat	506816	508193	1991	+	.	.
scaffold535	subtractBed	intrn	557243	558085	.	+	.	Parent=CGI_10020299;
	scaffold535	WUBlastX	LTR_Gypsy	557243	558085	403	+	.	.
scaffold535	subtractBed	intrn	558487	558741	.	+	.	Parent=CGI_10020299;
	scaffold535	WUBlastX	LTR_Gypsy	558487	558741	49	+	.	.
scaffold535	subtractBed	intrn	559381	559530	.	+	.	Parent=CGI_10020299;
	scaffold535	WUBlastX	LTR_Gypsy	559381	559530	50	+	.	.
scaffold535	subtractBed	intrn	557243	558244	.	+	.	Parent=CGI_10020299;
	scaffold535	WUBlastX	LTR_Gypsy	557243	558244	303	+	.	.
scaffold535	subtractBed	intrn	562307	562339	.	+	.	Parent=CGI_10020299;
	scaffold535	TRF	Tandem_Repeat	562307	562339	57	+	.	.
scaffold535	subtractBed	intrn	565767	566633	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_CR1-L2	565767	566633	75	+	.	.
scaffold535	subtractBed	intrn	565655	565786	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_CR1-L2	565655	565786	40	+	.	.
scaffold535	subtractBed	intrn	565628	565780	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_CR1-L2	565628	565780	26	+	.	.
scaffold535	subtractBed	intrn	565996	566232	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_CR1-L2	565996	566232	157	+	.	.
scaffold535	subtractBed	intrn	565703	565780	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_L2	565703	565780	45	+	.	.
scaffold535	subtractBed	intrn	566232	566645	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_L2	566232	566645	131	+	.	.
scaffold535	subtractBed	intrn	566627	566806	.	+	.	Parent=CGI_10020301;
	scaffold535	WUBlastX	LINE_L2	566627	566806	49	+	.	.
scaffold535	subtractBed	intrn	593297	593327	.	+	.	Parent=CGI_10020302;
	scaffold535	TRF	Tandem_Repeat	593297	593327	53	+	.	.
scaffold536	subtractBed	intrn	68697	68736	.	+	.	Parent=CGI_10006670;
	scaffold536	TRF	Tandem_Repeat	68697	68736	80	+	.	.
scaffold536	subtractBed	intrn	86189	86617	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	86189	86617	50	-	.	.
scaffold536	subtractBed	intrn	89611	89673	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_CR1-L2	89611	89673	20	+	.	.
scaffold536	subtractBed	intrn	88249	88494	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	88249	88494	48	+	.	.
scaffold536	subtractBed	intrn	86304	86513	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	86304	86513	97	-	.	.
scaffold536	subtractBed	intrn	85517	85687	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	85517	85687	23	-	.	.
scaffold536	subtractBed	intrn	85795	86067	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	85795	86067	21	-	.	.
scaffold536	subtractBed	intrn	86298	86546	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	86298	86546	93	-	.	.
scaffold536	subtractBed	intrn	88569	88640	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	88569	88640	33	+	.	.
scaffold536	subtractBed	intrn	85710	85781	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	85710	85781	22	-	.	.
scaffold536	subtractBed	intrn	88636	88749	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_CR1-L2	88636	88749	47	+	.	.
scaffold536	subtractBed	intrn	88327	88494	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	88327	88494	56	+	.	.
scaffold536	subtractBed	intrn	85992	86513	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	85992	86513	66	-	.	.
scaffold536	subtractBed	intrn	88669	88875	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_L2	88669	88875	70	+	.	.
scaffold536	subtractBed	intrn	85710	85763	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_RTE-X	85710	85763	31	-	.	.
scaffold536	subtractBed	intrn	88776	89441	.	+	.	Parent=CGI_10006670;
	scaffold536	WUBlastX	LINE_L2	88776	89441	93	+	.	.
scaffold536	subtractBed	intrn	96710	96736	.	+	.	Parent=CGI_10006672;
	scaffold536	TRF	Tandem_Repeat	96710	96736	54	+	.	.
scaffold536	subtractBed	intrn	127320	127383	.	-	.	Parent=CGI_10006674;
	scaffold536	TRF	Tandem_Repeat	127320	127383	128	+	.	.
scaffold536	subtractBed	intrn	128386	128431	.	-	.	Parent=CGI_10006674;
	scaffold536	TRF	Tandem_Repeat	128386	128431	65	+	.	.
scaffold54	subtractBed	intrn	81217	81615	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	81217	81615	137	+	.	.
scaffold54	subtractBed	intrn	80470	80832	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	80470	80832	65	+	.	.
scaffold54	subtractBed	intrn	80614	80853	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	80614	80853	79	+	.	.
scaffold54	subtractBed	intrn	79935	80495	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	79935	80495	54	+	.	.
scaffold54	subtractBed	intrn	80867	81151	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	80867	81151	48	+	.	.
scaffold54	subtractBed	intrn	80695	80889	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	80695	80889	61	+	.	.
scaffold54	subtractBed	intrn	81199	81288	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	81199	81288	31	+	.	.
scaffold54	subtractBed	intrn	79803	80291	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy-Cigr	79803	80291	151	+	.	.
scaffold54	subtractBed	intrn	79644	79787	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	79644	79787	20	+	.	.
scaffold54	subtractBed	intrn	83353	83544	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_ERV1	83353	83544	46	+	.	.
scaffold54	subtractBed	intrn	83356	83460	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	83356	83460	89	+	.	.
scaffold54	subtractBed	intrn	83087	83428	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy-Cigr	83087	83428	115	+	.	.
scaffold54	subtractBed	intrn	83135	83347	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy-Cigr	83135	83347	136	+	.	.
scaffold54	subtractBed	intrn	83356	83499	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	83356	83499	71	+	.	.
scaffold54	subtractBed	intrn	81609	83135	.	+	.	Parent=CGI_10023654;
	scaffold54	WUBlastX	LTR_Gypsy	81609	83135	946	+	.	.
scaffold54	subtractBed	intrn	89700	90101	.	+	.	Parent=CGI_10023655;
	scaffold54	WUBlastX	LINE_L1-Tx1	89700	90101	32	+	.	.
scaffold54	subtractBed	intrn	89706	89984	.	+	.	Parent=CGI_10023655;
	scaffold54	WUBlastX	LINE_L1-Tx1	89706	89984	38	+	.	.
scaffold54	subtractBed	intrn	101605	101689	.	-	.	Parent=CGI_10023656;
	scaffold54	TRF	Tandem_Repeat	101605	101689	170	+	.	.
scaffold54	subtractBed	intrn	105358	105405	.	-	.	Parent=CGI_10023656;
	scaffold54	TRF	Tandem_Repeat	105358	105405	51	+	.	.
scaffold54	subtractBed	intrn	105358	105405	.	-	.	Parent=CGI_10023656;
	scaffold54	TRF	Tandem_Repeat	105358	105405	59	+	.	.
scaffold54	subtractBed	intrn	120255	120294	.	+	.	Parent=CGI_10023657;
	scaffold54	TRF	Tandem_Repeat	120255	120294	80	+	.	.
scaffold54	subtractBed	intrn	125931	125986	.	-	.	Parent=CGI_10023658;
	scaffold54	TRF	Tandem_Repeat	125931	125986	112	+	.	.
scaffold54	subtractBed	intrn	126756	126802	.	-	.	Parent=CGI_10023658;
	scaffold54	TRF	Tandem_Repeat	126756	126802	94	+	.	.
scaffold54	subtractBed	intrn	138062	138131	.	-	.	Parent=CGI_10023658;
	scaffold54	TRF	Tandem_Repeat	138062	138131	140	+	.	.
scaffold54	subtractBed	intrn	153658	153691	.	+	.	Parent=CGI_10023660;
	scaffold54	TRF	Tandem_Repeat	153658	153691	68	+	.	.
scaffold54	subtractBed	intrn	173159	173237	.	-	.	Parent=CGI_10023661;
	scaffold54	TRF	Tandem_Repeat	173159	173237	113	+	.	.
scaffold54	subtractBed	intrn	209258	209327	.	+	.	Parent=CGI_10023665;
	scaffold54	TRF	Tandem_Repeat	209258	209327	131	+	.	.
scaffold54	subtractBed	intrn	212425	212483	.	+	.	Parent=CGI_10023665;
	scaffold54	TRF	Tandem_Repeat	212425	212483	118	+	.	.
scaffold54	subtractBed	intrn	226655	227008	.	+	.	Parent=CGI_10023667;
	scaffold54	TRF	Tandem_Repeat	226655	227008	528	+	.	.
scaffold54	subtractBed	intrn	227634	227893	.	+	.	Parent=CGI_10023667;
	scaffold54	TRF	Tandem_Repeat	227634	227893	263	+	.	.
scaffold54	subtractBed	intrn	227623	227901	.	+	.	Parent=CGI_10023667;
	scaffold54	TRF	Tandem_Repeat	227623	227901	234	+	.	.
scaffold54	subtractBed	intrn	306009	306093	.	+	.	Parent=CGI_10023674;
	scaffold54	TRF	Tandem_Repeat	306009	306093	170	+	.	.
scaffold54	subtractBed	intrn	370476	370509	.	-	.	Parent=CGI_10023676;
	scaffold54	TRF	Tandem_Repeat	370476	370509	50	+	.	.
scaffold54	subtractBed	intrn	371005	372145	.	-	.	Parent=CGI_10023676;
	scaffold54	TRF	Tandem_Repeat	371005	372145	2066	+	.	.
scaffold54	subtractBed	intrn	372154	372245	.	-	.	Parent=CGI_10023676;
	scaffold54	TRF	Tandem_Repeat	372154	372245	112	+	.	.
scaffold54	subtractBed	intrn	372159	372244	.	-	.	Parent=CGI_10023676;
	scaffold54	TRF	Tandem_Repeat	372159	372244	145	+	.	.
scaffold54	subtractBed	intrn	381434	381460	.	-	.	Parent=CGI_10023676;
	scaffold54	TRF	Tandem_Repeat	381434	381460	54	+	.	.
scaffold54	subtractBed	intrn	391294	391345	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	391294	391345	59	+	.	.
scaffold54	subtractBed	intrn	391294	391354	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	391294	391354	68	+	.	.
scaffold54	subtractBed	intrn	393669	394076	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	393669	394076	627	+	.	.
scaffold54	subtractBed	intrn	393669	394427	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	393669	394427	970	+	.	.
scaffold54	subtractBed	intrn	393669	394375	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	393669	394375	767	+	.	.
scaffold54	subtractBed	intrn	394094	394427	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	394094	394427	402	+	.	.
scaffold54	subtractBed	intrn	394094	394427	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	394094	394427	398	+	.	.
scaffold54	subtractBed	intrn	400700	400736	.	+	.	Parent=CGI_10023677;
	scaffold54	TRF	Tandem_Repeat	400700	400736	74	+	.	.
scaffold54	subtractBed	intrn	426659	426832	.	-	.	Parent=CGI_10023678;
	scaffold54	TRF	Tandem_Repeat	426659	426832	181	+	.	.
scaffold54	subtractBed	intrn	446402	446435	.	+	.	Parent=CGI_10023682;
	scaffold54	TRF	Tandem_Repeat	446402	446435	68	+	.	.
scaffold54	subtractBed	intrn	450341	450448	.	+	.	Parent=CGI_10023682;
	scaffold54	TRF	Tandem_Repeat	450341	450448	94	+	.	.
scaffold54	subtractBed	intrn	450513	450853	.	+	.	Parent=CGI_10023682;
	scaffold54	TRF	Tandem_Repeat	450513	450853	486	+	.	.
scaffold54	subtractBed	intrn	450517	450852	.	+	.	Parent=CGI_10023682;
	scaffold54	TRF	Tandem_Repeat	450517	450852	505	+	.	.
scaffold54	subtractBed	intrn	450341	450448	.	-	.	Parent=CGI_10023683;
	scaffold54	TRF	Tandem_Repeat	450341	450448	94	+	.	.
scaffold54	subtractBed	intrn	450513	450853	.	-	.	Parent=CGI_10023683;
	scaffold54	TRF	Tandem_Repeat	450513	450853	486	+	.	.
scaffold54	subtractBed	intrn	450517	450852	.	-	.	Parent=CGI_10023683;
	scaffold54	TRF	Tandem_Repeat	450517	450852	505	+	.	.
scaffold54	subtractBed	intrn	471084	471386	.	-	.	Parent=CGI_10023684;
	scaffold54	TRF	Tandem_Repeat	471084	471386	457	+	.	.
scaffold54	subtractBed	intrn	490026	490077	.	-	.	Parent=CGI_10023684;
	scaffold54	TRF	Tandem_Repeat	490026	490077	88	+	.	.
scaffold54	subtractBed	intrn	491725	492099	.	-	.	Parent=CGI_10023684;
	scaffold54	TRF	Tandem_Repeat	491725	492128	375	+	.	.
scaffold54	subtractBed	intrn	653580	653625	.	+	.	Parent=CGI_10023687;
	scaffold54	TRF	Tandem_Repeat	653580	653625	92	+	.	.
scaffold54	subtractBed	intrn	653643	653674	.	+	.	Parent=CGI_10023687;
	scaffold54	TRF	Tandem_Repeat	653643	653674	57	+	.	.
scaffold54	subtractBed	intrn	655665	655698	.	+	.	Parent=CGI_10023687;
	scaffold54	TRF	Tandem_Repeat	655665	655698	50	+	.	.
scaffold54	subtractBed	intrn	658653	658678	.	+	.	Parent=CGI_10023687;
	scaffold54	TRF	Tandem_Repeat	658653	658678	52	+	.	.
scaffold54	subtractBed	intrn	662008	662144	.	+	.	Parent=CGI_10023687;
	scaffold54	TRF	Tandem_Repeat	662008	662144	197	+	.	.
scaffold54	subtractBed	intrn	666519	666551	.	+	.	Parent=CGI_10023688;
	scaffold54	TRF	Tandem_Repeat	666519	666551	66	+	.	.
scaffold54	subtractBed	intrn	666067	666513	.	+	.	Parent=CGI_10023688;
	scaffold54	WUBlastX	DNA_Crypton	666067	666513	43	+	.	.
scaffold54	subtractBed	intrn	669714	669722	.	+	.	Parent=CGI_10023688;
	scaffold54	WUBlastX	DNA_Sola	669714	669866	35	+	.	.
scaffold54	subtractBed	intrn	669840	669866	.	+	.	Parent=CGI_10023688;
	scaffold54	WUBlastX	DNA_Sola	669714	669866	35	+	.	.
scaffold54	subtractBed	intrn	670780	670788	.	+	.	Parent=CGI_10023688;
	scaffold54	WUBlastX	DNA_Sola	670780	671223	115	+	.	.
scaffold54	subtractBed	intrn	699439	699487	.	+	.	Parent=CGI_10023690;
	scaffold54	TRF	Tandem_Repeat	699439	699487	98	+	.	.
scaffold54	subtractBed	intrn	699498	699818	.	+	.	Parent=CGI_10023690;
	scaffold54	WUBlastX	LINE_RTE-X	699498	699818	79	-	.	.
scaffold54	subtractBed	intrn	704727	704770	.	+	.	Parent=CGI_10023691;
	scaffold54	TRF	Tandem_Repeat	704727	704770	61	+	.	.
scaffold54	subtractBed	intrn	706576	706629	.	+	.	Parent=CGI_10023691;
	scaffold54	TRF	Tandem_Repeat	706576	706629	55	+	.	.
scaffold54	subtractBed	intrn	706577	706618	.	+	.	Parent=CGI_10023691;
	scaffold54	TRF	Tandem_Repeat	706577	706618	50	+	.	.
scaffold54	subtractBed	intrn	713549	713579	.	+	.	Parent=CGI_10023691;
	scaffold54	TRF	Tandem_Repeat	713549	713579	62	+	.	.
scaffold54	subtractBed	intrn	714947	715018	.	+	.	Parent=CGI_10023691;
	scaffold54	TRF	Tandem_Repeat	714947	715018	135	+	.	.
scaffold54	subtractBed	intrn	731933	731987	.	+	.	Parent=CGI_10023692;
	scaffold54	TRF	Tandem_Repeat	731933	731987	96	+	.	.
scaffold54	subtractBed	intrn	740383	740430	.	+	.	Parent=CGI_10023692;
	scaffold54	TRF	Tandem_Repeat	740383	740430	60	+	.	.
scaffold54	subtractBed	intrn	740872	740937	.	+	.	Parent=CGI_10023692;
	scaffold54	TRF	Tandem_Repeat	740872	740937	132	+	.	.
scaffold54	subtractBed	intrn	741203	741247	.	+	.	Parent=CGI_10023692;
	scaffold54	TRF	Tandem_Repeat	741203	741247	81	+	.	.
scaffold54	subtractBed	intrn	751059	751104	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	751059	751104	56	+	.	.
scaffold54	subtractBed	intrn	751064	751177	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	751064	751177	112	+	.	.
scaffold54	subtractBed	intrn	751064	751189	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	751064	751189	108	+	.	.
scaffold54	subtractBed	intrn	751081	751189	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	751081	751189	120	+	.	.
scaffold54	subtractBed	intrn	751902	751977	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	751902	751977	143	+	.	.
scaffold54	subtractBed	intrn	752407	752449	.	+	.	Parent=CGI_10023693;
	scaffold54	TRF	Tandem_Repeat	752407	752449	86	+	.	.
scaffold54	subtractBed	intrn	763703	763741	.	+	.	Parent=CGI_10023695;
	scaffold54	TRF	Tandem_Repeat	763703	763741	78	+	.	.
scaffold54	subtractBed	intrn	765152	765190	.	+	.	Parent=CGI_10023695;
	scaffold54	TRF	Tandem_Repeat	765152	765190	78	+	.	.
scaffold54	subtractBed	intrn	765809	765855	.	+	.	Parent=CGI_10023695;
	scaffold54	TRF	Tandem_Repeat	765809	765855	58	+	.	.
scaffold54	subtractBed	intrn	765817	765855	.	+	.	Parent=CGI_10023695;
	scaffold54	TRF	Tandem_Repeat	765817	765855	55	+	.	.
scaffold54	subtractBed	intrn	770959	771008	.	+	.	Parent=CGI_10023695;
	scaffold54	TRF	Tandem_Repeat	770959	771008	100	+	.	.
scaffold54	subtractBed	intrn	779620	780155	.	+	.	Parent=CGI_10023696;
	scaffold54	TRF	Tandem_Repeat	779620	780155	910	+	.	.
scaffold54	subtractBed	intrn	780652	780690	.	+	.	Parent=CGI_10023696;
	scaffold54	TRF	Tandem_Repeat	780652	780690	51	+	.	.
scaffold54	subtractBed	intrn	779075	779090	.	+	.	Parent=CGI_10023696;
	scaffold54	WUBlastX	DNA_Harbinger	778926	779090	57	+	.	.
scaffold541	subtractBed	intrn	54946	54979	.	-	.	Parent=CGI_10022375;
	scaffold541	TRF	Tandem_Repeat	54946	54979	68	+	.	.
scaffold541	subtractBed	intrn	62079	62138	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy	62079	62138	21	+	.	.
scaffold541	subtractBed	intrn	62329	62538	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy	62329	62538	84	+	.	.
scaffold541	subtractBed	intrn	62362	62619	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy	62362	62619	128	+	.	.
scaffold541	subtractBed	intrn	62287	62532	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy	62287	62532	69	+	.	.
scaffold541	subtractBed	intrn	62362	62544	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy-Cigr	62362	62544	179	+	.	.
scaffold541	subtractBed	intrn	62796	62882	.	-	.	Parent=CGI_10022375;
	scaffold541	WUBlastX	LTR_Gypsy	62796	62882	21	+	.	.
scaffold541	subtractBed	intrn	76667	76821	.	-	.	Parent=CGI_10022376;
	scaffold541	TRF	Tandem_Repeat	76667	76821	107	+	.	.
scaffold541	subtractBed	intrn	77330	77419	.	-	.	Parent=CGI_10022376;
	scaffold541	TRF	Tandem_Repeat	77330	77419	108	+	.	.
scaffold541	subtractBed	intrn	77904	77983	.	-	.	Parent=CGI_10022376;
	scaffold541	TRF	Tandem_Repeat	77904	77983	151	+	.	.
scaffold541	subtractBed	intrn	243428	243457	.	-	.	Parent=CGI_10022380;
	scaffold541	TRF	Tandem_Repeat	243428	243457	60	+	.	.
scaffold541	subtractBed	intrn	249145	249302	.	-	.	Parent=CGI_10022380;
	scaffold541	TRF	Tandem_Repeat	249145	249302	253	+	.	.
scaffold541	subtractBed	intrn	252734	252891	.	-	.	Parent=CGI_10022380;
	scaffold541	TRF	Tandem_Repeat	252734	252891	253	+	.	.
scaffold541	subtractBed	intrn	249145	249302	.	+	.	Parent=CGI_10022381;
	scaffold541	TRF	Tandem_Repeat	249145	249302	253	+	.	.
scaffold541	subtractBed	intrn	252734	252891	.	+	.	Parent=CGI_10022381;
	scaffold541	TRF	Tandem_Repeat	252734	252891	253	+	.	.
scaffold541	subtractBed	intrn	259136	259494	.	+	.	Parent=CGI_10022381;
	scaffold541	TRF	Tandem_Repeat	259136	259832	1041	+	.	.
scaffold541	subtractBed	intrn	259136	259494	.	-	.	Parent=CGI_10022382;
	scaffold541	TRF	Tandem_Repeat	259136	259832	1041	+	.	.
scaffold541	subtractBed	intrn	285445	285511	.	+	.	Parent=CGI_10022385;
	scaffold541	TRF	Tandem_Repeat	285445	285511	53	+	.	.
scaffold541	subtractBed	intrn	285915	285974	.	+	.	Parent=CGI_10022385;
	scaffold541	TRF	Tandem_Repeat	285915	285974	120	+	.	.
scaffold541	subtractBed	intrn	311515	311616	.	-	.	Parent=CGI_10022389;
	scaffold541	TRF	Tandem_Repeat	311515	311616	123	+	.	.
scaffold541	subtractBed	intrn	323673	324046	.	+	.	Parent=CGI_10022390;
	scaffold541	TRF	Tandem_Repeat	323673	324046	509	+	.	.
scaffold541	subtractBed	intrn	384707	385629	.	-	.	Parent=CGI_10022391;
	scaffold541	TRF	Tandem_Repeat	384707	385629	1276	+	.	.
scaffold541	subtractBed	intrn	396295	396367	.	+	.	Parent=CGI_10022393;
	scaffold541	TRF	Tandem_Repeat	396295	396367	84	+	.	.
scaffold541	subtractBed	intrn	396302	396351	.	+	.	Parent=CGI_10022393;
	scaffold541	TRF	Tandem_Repeat	396302	396351	54	+	.	.
scaffold541	subtractBed	intrn	471919	471964	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	471919	471964	74	+	.	.
scaffold541	subtractBed	intrn	472750	472810	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	472750	472810	122	+	.	.
scaffold541	subtractBed	intrn	473561	473627	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	473561	473627	134	+	.	.
scaffold541	subtractBed	intrn	473963	474023	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	473963	474023	113	+	.	.
scaffold541	subtractBed	intrn	469014	471281	.	+	.	Parent=CGI_10022394;
	scaffold541	WUBlastX	LINE_RTE-X	469014	471281	384	+	.	.
scaffold541	subtractBed	intrn	468414	471029	.	+	.	Parent=CGI_10022394;
	scaffold541	WUBlastX	LINE_Proto2	468414	471029	276	+	.	.
scaffold541	subtractBed	intrn	468134	468199	.	+	.	Parent=CGI_10022394;
	scaffold541	WUBlastX	LINE_CR1	468134	468199	22	+	.	.
scaffold541	subtractBed	intrn	469602	471608	.	+	.	Parent=CGI_10022394;
	scaffold541	WUBlastX	LINE_I	469602	471608	30	+	.	.
scaffold541	subtractBed	intrn	469491	471170	.	+	.	Parent=CGI_10022394;
	scaffold541	WUBlastX	LINE_RTE-X	469491	471170	409	+	.	.
scaffold541	subtractBed	intrn	476042	476086	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	476042	476086	72	+	.	.
scaffold541	subtractBed	intrn	476257	476285	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	476257	476285	58	+	.	.
scaffold541	subtractBed	intrn	476420	476456	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	476420	476456	65	+	.	.
scaffold541	subtractBed	intrn	476574	476636	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	476574	476636	90	+	.	.
scaffold541	subtractBed	intrn	476565	476636	.	+	.	Parent=CGI_10022394;
	scaffold541	TRF	Tandem_Repeat	476565	476636	69	+	.	.
scaffold541	subtractBed	intrn	482294	482341	.	+	.	Parent=CGI_10022395;
	scaffold541	TRF	Tandem_Repeat	482294	482341	89	+	.	.
scaffold541	subtractBed	intrn	526212	526309	.	+	.	Parent=CGI_10022396;
	scaffold541	TRF	Tandem_Repeat	526212	526309	124	+	.	.
scaffold541	subtractBed	intrn	527189	527281	.	+	.	Parent=CGI_10022396;
	scaffold541	TRF	Tandem_Repeat	527189	527281	159	+	.	.
scaffold541	subtractBed	intrn	527254	527525	.	+	.	Parent=CGI_10022396;
	scaffold541	TRF	Tandem_Repeat	527254	527525	351	+	.	.
scaffold541	subtractBed	intrn	529046	529113	.	+	.	Parent=CGI_10022396;
	scaffold541	TRF	Tandem_Repeat	529046	529113	136	+	.	.
scaffold541	subtractBed	intrn	530955	531164	.	+	.	Parent=CGI_10022396;
	scaffold541	TRF	Tandem_Repeat	530932	531164	448	+	.	.
scaffold541	subtractBed	intrn	534773	535031	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	534773	535031	118	+	.	.
scaffold541	subtractBed	intrn	539370	539576	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	539370	539576	207	+	.	.
scaffold541	subtractBed	intrn	539814	540129	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	539814	540129	485	+	.	.
scaffold541	subtractBed	intrn	541026	541395	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	541026	541395	573	+	.	.
scaffold541	subtractBed	intrn	542146	543786	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	542146	543786	3151	+	.	.
scaffold541	subtractBed	intrn	543939	544204	.	-	.	Parent=CGI_10022398;
	scaffold541	TRF	Tandem_Repeat	543939	544204	424	+	.	.
scaffold541	subtractBed	intrn	550717	551556	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	550681	551556	605	+	.	.
scaffold541	subtractBed	intrn	552036	552413	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	552036	552413	452	+	.	.
scaffold541	subtractBed	intrn	552100	552216	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	552100	552216	75	+	.	.
scaffold541	subtractBed	intrn	552051	552209	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	552051	552209	72	+	.	.
scaffold541	subtractBed	intrn	553179	554156	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	553179	554156	1084	+	.	.
scaffold541	subtractBed	intrn	553500	554257	.	+	.	Parent=CGI_10022399;
	scaffold541	TRF	Tandem_Repeat	553500	554257	482	+	.	.
scaffold541	subtractBed	intrn	567106	567221	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	567106	567221	74	+	.	.
scaffold541	subtractBed	intrn	567314	567740	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	567314	567740	396	+	.	.
scaffold541	subtractBed	intrn	567314	567740	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	567314	567740	446	+	.	.
scaffold541	subtractBed	intrn	567934	568022	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	567934	568022	78	+	.	.
scaffold541	subtractBed	intrn	567896	568100	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	567896	568100	224	+	.	.
scaffold541	subtractBed	intrn	570082	570240	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	570082	570240	272	+	.	.
scaffold541	subtractBed	intrn	571203	571743	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	571203	571743	830	+	.	.
scaffold541	subtractBed	intrn	573504	574271	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	573504	574271	1204	+	.	.
scaffold541	subtractBed	intrn	574778	575268	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	574778	575268	831	+	.	.
scaffold541	subtractBed	intrn	577731	578453	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	577731	578453	540	+	.	.
scaffold541	subtractBed	intrn	577731	578306	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	577731	578306	496	+	.	.
scaffold541	subtractBed	intrn	577738	578313	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	577738	578313	636	+	.	.
scaffold541	subtractBed	intrn	578503	579807	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	578503	579807	1731	+	.	.
scaffold541	subtractBed	intrn	580859	581019	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	580859	581019	286	+	.	.
scaffold541	subtractBed	intrn	583207	583366	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	583207	583366	234	+	.	.
scaffold541	subtractBed	intrn	584527	584660	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	584527	584660	150	+	.	.
scaffold541	subtractBed	intrn	584783	585139	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	584783	585139	522	+	.	.
scaffold541	subtractBed	intrn	584783	585139	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	584783	585139	579	+	.	.
scaffold541	subtractBed	intrn	585702	585747	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	585702	585747	56	+	.	.
scaffold541	subtractBed	intrn	585702	585731	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	585702	585731	51	+	.	.
scaffold541	subtractBed	intrn	589942	590347	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	589942	590347	428	+	.	.
scaffold541	subtractBed	intrn	590573	590717	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	590573	590717	197	+	.	.
scaffold541	subtractBed	intrn	590573	590748	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	590573	590748	273	+	.	.
scaffold541	subtractBed	intrn	590959	591613	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	590959	591613	1143	+	.	.
scaffold541	subtractBed	intrn	592729	593162	.	-	.	Parent=CGI_10022401;
	scaffold541	TRF	Tandem_Repeat	592729	593162	679	+	.	.
scaffold542	subtractBed	intrn	4826	4972	.	+	.	Parent=CGI_10014753;
	scaffold542	TRF	Tandem_Repeat	4826	4972	73	+	.	.
scaffold542	subtractBed	intrn	4888	5017	.	+	.	Parent=CGI_10014753;
	scaffold542	TRF	Tandem_Repeat	4888	5017	93	+	.	.
scaffold542	subtractBed	intrn	36095	36119	.	+	.	Parent=CGI_10014755;
	scaffold542	TRF	Tandem_Repeat	36095	36119	50	+	.	.
scaffold542	subtractBed	intrn	38857	38910	.	+	.	Parent=CGI_10014755;
	scaffold542	TRF	Tandem_Repeat	38857	38910	108	+	.	.
scaffold542	subtractBed	intrn	58563	58615	.	+	.	Parent=CGI_10014757;
	scaffold542	TRF	Tandem_Repeat	58563	58615	106	+	.	.
scaffold542	subtractBed	intrn	84051	84173	.	-	.	Parent=CGI_10014759;
	scaffold542	WUBlastX	LINE_RTE-X	84051	84173	26	+	.	.
scaffold542	subtractBed	intrn	85502	85548	.	-	.	Parent=CGI_10014759;
	scaffold542	TRF	Tandem_Repeat	85502	85548	94	+	.	.
scaffold542	subtractBed	intrn	93205	93264	.	-	.	Parent=CGI_10014759;
	scaffold542	TRF	Tandem_Repeat	93205	93264	120	+	.	.
scaffold542	subtractBed	intrn	95620	95668	.	-	.	Parent=CGI_10014759;
	scaffold542	TRF	Tandem_Repeat	95620	95668	98	+	.	.
scaffold542	subtractBed	intrn	114011	114056	.	-	.	Parent=CGI_10014761;
	scaffold542	TRF	Tandem_Repeat	114011	114056	92	+	.	.
scaffold542	subtractBed	intrn	120956	121105	.	-	.	Parent=CGI_10014761;
	scaffold542	TRF	Tandem_Repeat	120956	121105	147	+	.	.
scaffold542	subtractBed	intrn	121104	121252	.	-	.	Parent=CGI_10014761;
	scaffold542	TRF	Tandem_Repeat	121104	121252	97	+	.	.
scaffold542	subtractBed	intrn	121368	121454	.	-	.	Parent=CGI_10014761;
	scaffold542	TRF	Tandem_Repeat	121368	121454	113	+	.	.
scaffold542	subtractBed	intrn	231791	232381	.	-	.	Parent=CGI_10014766;
	scaffold542	WUBlastX	LINE_L1-Tx1	231791	232381	60	+	.	.
scaffold542	subtractBed	intrn	241831	241892	.	-	.	Parent=CGI_10014766;
	scaffold542	TRF	Tandem_Repeat	241831	241892	70	+	.	.
scaffold542	subtractBed	intrn	271129	271310	.	-	.	Parent=CGI_10014767;
	scaffold542	TRF	Tandem_Repeat	271129	271310	271	+	.	.
scaffold542	subtractBed	intrn	314959	314998	.	+	.	Parent=CGI_10014768;
	scaffold542	TRF	Tandem_Repeat	314959	314998	80	+	.	.
scaffold542	subtractBed	intrn	319199	319238	.	+	.	Parent=CGI_10014768;
	scaffold542	TRF	Tandem_Repeat	319199	319238	80	+	.	.
scaffold542	subtractBed	intrn	320378	320465	.	+	.	Parent=CGI_10014768;
	scaffold542	TRF	Tandem_Repeat	320378	320465	158	+	.	.
scaffold542	subtractBed	intrn	324440	324580	.	+	.	Parent=CGI_10014768;
	scaffold542	TRF	Tandem_Repeat	324440	324580	151	+	.	.
scaffold542	subtractBed	intrn	325244	325279	.	+	.	Parent=CGI_10014768;
	scaffold542	TRF	Tandem_Repeat	325244	325279	72	+	.	.
scaffold542	subtractBed	intrn	339560	339604	.	+	.	Parent=CGI_10014769;
	scaffold542	TRF	Tandem_Repeat	339560	339604	74	+	.	.
scaffold542	subtractBed	intrn	378039	378094	.	+	.	Parent=CGI_10014771;
	scaffold542	TRF	Tandem_Repeat	378039	378094	112	+	.	.
scaffold544	subtractBed	intrn	15534	16121	.	+	.	Parent=CGI_10022542;
	scaffold544	TRF	Tandem_Repeat	15534	16121	1023	+	.	.
scaffold544	subtractBed	intrn	21878	21970	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	21878	21970	118	+	.	.
scaffold544	subtractBed	intrn	21878	21970	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	21878	21970	131	+	.	.
scaffold544	subtractBed	intrn	25011	25207	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	25011	25207	214	+	.	.
scaffold544	subtractBed	intrn	25009	25201	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	25009	25201	206	+	.	.
scaffold544	subtractBed	intrn	25009	25207	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	25009	25207	218	+	.	.
scaffold544	subtractBed	intrn	26248	26696	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	26248	26696	772	+	.	.
scaffold544	subtractBed	intrn	29102	30439	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	29087	30439	1642	+	.	.
scaffold544	subtractBed	intrn	31033	31123	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	31033	31123	85	+	.	.
scaffold544	subtractBed	intrn	31113	31285	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	31113	31310	360	+	.	.
scaffold544	subtractBed	intrn	32014	32172	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	32014	32172	300	+	.	.
scaffold544	subtractBed	intrn	32429	32475	.	-	.	Parent=CGI_10022543;
	scaffold544	TRF	Tandem_Repeat	32429	32475	94	+	.	.
scaffold544	subtractBed	intrn	38438	38570	.	+	.	Parent=CGI_10022544;
	scaffold544	TRF	Tandem_Repeat	38438	38570	187	+	.	.
scaffold544	subtractBed	intrn	38599	38706	.	+	.	Parent=CGI_10022544;
	scaffold544	TRF	Tandem_Repeat	38599	38706	171	+	.	.
scaffold544	subtractBed	intrn	38192	38419	.	+	.	Parent=CGI_10022544;
	scaffold544	WUBlastX	LINE_RTE-X	38192	38419	71	-	.	.
scaffold544	subtractBed	intrn	38249	38425	.	+	.	Parent=CGI_10022544;
	scaffold544	WUBlastX	LINE_RTE-X	38249	38425	87	-	.	.
scaffold544	subtractBed	intrn	47914	47949	.	-	.	Parent=CGI_10022545;
	scaffold544	TRF	Tandem_Repeat	47914	47949	72	+	.	.
scaffold544	subtractBed	intrn	49050	49101	.	-	.	Parent=CGI_10022545;
	scaffold544	TRF	Tandem_Repeat	49050	49101	104	+	.	.
scaffold544	subtractBed	intrn	49636	50290	.	-	.	Parent=CGI_10022545;
	scaffold544	TRF	Tandem_Repeat	49636	50290	661	+	.	.
scaffold544	subtractBed	intrn	50631	50669	.	-	.	Parent=CGI_10022545;
	scaffold544	TRF	Tandem_Repeat	50631	50669	78	+	.	.
scaffold544	subtractBed	intrn	71028	71944	.	-	.	Parent=CGI_10022548;
	scaffold544	TRF	Tandem_Repeat	71028	71952	1472	+	.	.
scaffold544	subtractBed	intrn	159704	159936	.	-	.	Parent=CGI_10022551;
	scaffold544	TRF	Tandem_Repeat	159704	159936	306	+	.	.
scaffold544	subtractBed	intrn	159704	159936	.	-	.	Parent=CGI_10022551;
	scaffold544	TRF	Tandem_Repeat	159704	159936	270	+	.	.
scaffold544	subtractBed	intrn	154794	155111	.	-	.	Parent=CGI_10022551;
	scaffold544	WUBlastX	LINE_L2	154794	155111	160	+	.	.
scaffold544	subtractBed	intrn	210067	210863	.	+	.	Parent=CGI_10022552;
	scaffold544	TRF	Tandem_Repeat	210067	210863	1162	+	.	.
scaffold544	subtractBed	intrn	209819	210052	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1	209819	210052	72	-	.	.
scaffold544	subtractBed	intrn	209740	209811	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1-Tx1	209740	209811	22	-	.	.
scaffold544	subtractBed	intrn	210917	211087	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1-Tx1	210917	211087	66	-	.	.
scaffold544	subtractBed	intrn	209771	209968	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1	209771	209968	46	-	.	.
scaffold544	subtractBed	intrn	210878	211090	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1	210878	211090	45	-	.	.
scaffold544	subtractBed	intrn	209758	209829	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1	209758	209829	26	-	.	.
scaffold544	subtractBed	intrn	211036	211659	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1-Tx1	211036	211659	100	-	.	.
scaffold544	subtractBed	intrn	211658	212224	.	+	.	Parent=CGI_10022552;
	scaffold544	WUBlastX	LINE_L1-Tx1	211658	212224	273	-	.	.
scaffold544	subtractBed	intrn	254100	255219	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	254100	255219	1468	+	.	.
scaffold544	subtractBed	intrn	251639	252103	.	-	.	Parent=CGI_10022553;
	scaffold544	WUBlastX	DNA_TcMar-Tc1	251639	252103	239	-	.	.
scaffold544	subtractBed	intrn	251639	252619	.	-	.	Parent=CGI_10022553;
	scaffold544	WUBlastX	DNA_TcMar-Tc1	251639	252619	137	-	.	.
scaffold544	subtractBed	intrn	270060	270746	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	270060	270746	828	+	.	.
scaffold544	subtractBed	intrn	270060	270745	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	270060	270745	880	+	.	.
scaffold544	subtractBed	intrn	272171	272617	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	272171	272617	499	+	.	.
scaffold544	subtractBed	intrn	287736	287803	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	287736	287803	108	+	.	.
scaffold544	subtractBed	intrn	288522	288563	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	288522	288563	84	+	.	.
scaffold544	subtractBed	intrn	289321	289392	.	-	.	Parent=CGI_10022553;
	scaffold544	TRF	Tandem_Repeat	289321	289392	99	+	.	.
scaffold544	subtractBed	intrn	288765	288929	.	-	.	Parent=CGI_10022553;
	scaffold544	WUBlastX	LINE_RTE-BovB	288765	288929	130	-	.	.
scaffold544	subtractBed	intrn	288771	289052	.	-	.	Parent=CGI_10022553;
	scaffold544	WUBlastX	LINE_RTE-BovB	288771	289052	91	-	.	.
scaffold544	subtractBed	intrn	436873	436922	.	-	.	Parent=CGI_10022562;
	scaffold544	TRF	Tandem_Repeat	436873	436922	57	+	.	.
scaffold544	subtractBed	intrn	453843	454374	.	+	.	Parent=CGI_10022563;
	scaffold544	TRF	Tandem_Repeat	453843	454374	861	+	.	.
scaffold544	subtractBed	intrn	456160	456291	.	+	.	Parent=CGI_10022563;
	scaffold544	TRF	Tandem_Repeat	456160	456291	74	+	.	.
scaffold544	subtractBed	intrn	508831	508869	.	+	.	Parent=CGI_10022568;
	scaffold544	TRF	Tandem_Repeat	508831	508869	69	+	.	.
scaffold544	subtractBed	intrn	521991	522055	.	+	.	Parent=CGI_10022569;
	scaffold544	TRF	Tandem_Repeat	521991	522055	69	+	.	.
scaffold544	subtractBed	intrn	564240	564437	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	564240	564437	71	+	.	.
scaffold544	subtractBed	intrn	563682	564386	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	563682	564386	95	+	.	.
scaffold544	subtractBed	intrn	563682	564251	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	563682	564251	106	+	.	.
scaffold544	subtractBed	intrn	563682	564062	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	563682	564062	156	+	.	.
scaffold544	subtractBed	intrn	562452	562577	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LINE_RTE-X	562452	562577	66	-	.	.
scaffold544	subtractBed	intrn	565423	565758	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	565423	565758	111	+	.	.
scaffold544	subtractBed	intrn	562425	562577	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LINE_RTE-X	562425	562577	41	-	.	.
scaffold544	subtractBed	intrn	564449	564691	.	-	.	Parent=CGI_10022574;
	scaffold544	WUBlastX	LTR_DIRS	564449	564691	117	+	.	.
scaffold544	subtractBed	intrn	617626	618090	.	-	.	Parent=CGI_10022576;
	scaffold544	WUBlastX	LINE_CR1-L2	617626	618090	127	+	.	.
scaffold544	subtractBed	intrn	617614	618411	.	-	.	Parent=CGI_10022576;
	scaffold544	WUBlastX	LINE_L2	617614	618411	110	+	.	.
scaffold544	subtractBed	intrn	639583	639627	.	-	.	Parent=CGI_10022577;
	scaffold544	TRF	Tandem_Repeat	639583	639627	90	+	.	.
scaffold544	subtractBed	intrn	657511	657556	.	-	.	Parent=CGI_10022579;
	scaffold544	TRF	Tandem_Repeat	657511	657556	92	+	.	.
scaffold544	subtractBed	intrn	732347	732844	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Gypsy-Cigr	732347	732844	186	-	.	.
scaffold544	subtractBed	intrn	728345	728524	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Copia	728345	728524	59	-	.	.
scaffold544	subtractBed	intrn	729884	731971	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Gypsy-Cigr	729884	731971	1341	-	.	.
scaffold544	subtractBed	intrn	728492	731581	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Gypsy-Cigr	728492	731581	2080	-	.	.
scaffold544	subtractBed	intrn	729011	732565	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Gypsy	729011	732565	579	-	.	.
scaffold544	subtractBed	intrn	728423	728794	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	LTR_Gypsy	728423	728794	88	-	.	.
scaffold544	subtractBed	intrn	738917	739033	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	DNA_TcMar-Tigge	738917	739033	35	+	.	.
scaffold544	subtractBed	intrn	739030	739380	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	DNA_TcMar-Pogo	739030	739380	105	+	.	.
scaffold544	subtractBed	intrn	738935	739033	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	DNA_TcMar-Pogo	738935	739033	65	+	.	.
scaffold544	subtractBed	intrn	739066	739362	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	DNA_TcMar-Pogo	739066	739362	144	+	.	.
scaffold544	subtractBed	intrn	739066	739296	.	-	.	Parent=CGI_10022583;
	scaffold544	WUBlastX	DNA_TcMar-Pogo	739066	739296	156	+	.	.
scaffold546	subtractBed	intrn	25084	25426	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	25063	25426	539	+	.	.
scaffold546	subtractBed	intrn	26207	26316	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	26207	26316	202	+	.	.
scaffold546	subtractBed	intrn	32800	33181	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	32800	33181	366	+	.	.
scaffold546	subtractBed	intrn	32547	32943	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	32517	32943	271	+	.	.
scaffold546	subtractBed	intrn	32547	32941	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	32517	32941	292	+	.	.
scaffold546	subtractBed	intrn	32547	32943	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	32517	32943	178	+	.	.
scaffold546	subtractBed	intrn	36496	36798	.	+	.	Parent=CGI_10020990;
	scaffold546	WUBlastX	LINE_RTE-X	36496	36798	27	-	.	.
scaffold546	subtractBed	intrn	36454	36750	.	+	.	Parent=CGI_10020990;
	scaffold546	WUBlastX	LINE_RTE-X	36454	36750	89	-	.	.
scaffold546	subtractBed	intrn	36487	36726	.	+	.	Parent=CGI_10020990;
	scaffold546	WUBlastX	LINE_RTE-X	36487	36726	107	-	.	.
scaffold546	subtractBed	intrn	37872	38040	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	37845	38040	374	+	.	.
scaffold546	subtractBed	intrn	39666	39710	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	39666	39710	90	+	.	.
scaffold546	subtractBed	intrn	44816	45160	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	44816	45160	484	+	.	.
scaffold546	subtractBed	intrn	47242	47623	.	+	.	Parent=CGI_10020990;
	scaffold546	TRF	Tandem_Repeat	47242	47623	534	+	.	.
scaffold546	subtractBed	intrn	78435	78462	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	78435	78462	56	+	.	.
scaffold546	subtractBed	intrn	79195	79834	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	79195	79839	1125	+	.	.
scaffold546	subtractBed	intrn	87859	87918	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	87859	87918	57	+	.	.
scaffold546	subtractBed	intrn	88104	88466	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	88104	88481	503	+	.	.
scaffold546	subtractBed	intrn	90129	91447	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	90129	91447	2154	+	.	.
scaffold546	subtractBed	intrn	90129	91447	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	90129	91447	2124	+	.	.
scaffold546	subtractBed	intrn	90129	91447	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	90129	91447	2137	+	.	.
scaffold546	subtractBed	intrn	96003	96310	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	96003	96310	221	+	.	.
scaffold546	subtractBed	intrn	96008	96653	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	96008	96653	421	+	.	.
scaffold546	subtractBed	intrn	96064	97149	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	96064	97149	888	+	.	.
scaffold546	subtractBed	intrn	96003	97082	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	96003	97082	266	+	.	.
scaffold546	subtractBed	intrn	97898	98861	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	97898	98861	1554	+	.	.
scaffold546	subtractBed	intrn	101995	102330	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	101995	102330	584	+	.	.
scaffold546	subtractBed	intrn	103460	103798	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	103460	103798	669	+	.	.
scaffold546	subtractBed	intrn	113193	113270	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	113193	113270	52	+	.	.
scaffold546	subtractBed	intrn	115015	115040	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	115015	115040	52	+	.	.
scaffold546	subtractBed	intrn	114137	114898	.	-	.	Parent=CGI_10020993;
	scaffold546	TRF	Tandem_Repeat	114137	114898	1013	+	.	.
scaffold546	subtractBed	intrn	129607	129658	.	+	.	Parent=CGI_10020994;
	scaffold546	TRF	Tandem_Repeat	129607	129658	104	+	.	.
scaffold546	subtractBed	intrn	130550	131162	.	+	.	Parent=CGI_10020994;
	scaffold546	TRF	Tandem_Repeat	130550	131162	1156	+	.	.
scaffold546	subtractBed	intrn	141672	142237	.	-	.	Parent=CGI_10020995;
	scaffold546	TRF	Tandem_Repeat	141672	142264	872	+	.	.
scaffold546	subtractBed	intrn	142370	142736	.	-	.	Parent=CGI_10020995;
	scaffold546	TRF	Tandem_Repeat	142364	142736	586	+	.	.
scaffold546	subtractBed	intrn	144461	145430	.	-	.	Parent=CGI_10020995;
	scaffold546	WUBlastX	LINE_L2	144432	145430	29	+	.	.
scaffold546	subtractBed	intrn	146713	147087	.	-	.	Parent=CGI_10020995;
	scaffold546	WUBlastX	LINE_L1-Tx1	146713	147087	156	+	.	.
scaffold546	subtractBed	intrn	144591	145736	.	-	.	Parent=CGI_10020995;
	scaffold546	WUBlastX	LINE_L1-Tx1	144591	145736	812	+	.	.
scaffold546	subtractBed	intrn	145730	146524	.	-	.	Parent=CGI_10020995;
	scaffold546	WUBlastX	LINE_L1-Tx1	145730	146524	102	+	.	.
scaffold546	subtractBed	intrn	147078	148313	.	-	.	Parent=CGI_10020995;
	scaffold546	WUBlastX	LINE_L1	147078	148313	186	+	.	.
scaffold546	subtractBed	intrn	201187	201406	.	+	.	Parent=CGI_10020997;
	scaffold546	TRF	Tandem_Repeat	201187	201406	224	+	.	.
scaffold546	subtractBed	intrn	201187	201406	.	+	.	Parent=CGI_10020997;
	scaffold546	TRF	Tandem_Repeat	201187	201406	296	+	.	.
scaffold546	subtractBed	intrn	204167	204682	.	+	.	Parent=CGI_10020997;
	scaffold546	TRF	Tandem_Repeat	204159	204682	724	+	.	.
scaffold546	subtractBed	intrn	249274	251256	.	-	.	Parent=CGI_10020999;
	scaffold546	WUBlastX	LTR_Gypsy	249274	251256	584	-	.	.
scaffold546	subtractBed	intrn	394012	394245	.	-	.	Parent=CGI_10021003;
	scaffold546	WUBlastX	DNA_hAT-Tip100	394012	394245	116	-	.	.
scaffold546	subtractBed	intrn	394018	394299	.	-	.	Parent=CGI_10021003;
	scaffold546	WUBlastX	DNA_hAT-Tip100	394018	394299	41	-	.	.
scaffold546	subtractBed	intrn	431557	431611	.	-	.	Parent=CGI_10021005;
	scaffold546	TRF	Tandem_Repeat	431557	431611	74	+	.	.
scaffold546	subtractBed	intrn	532626	532793	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	532626	532793	282	+	.	.
scaffold546	subtractBed	intrn	541934	542118	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	541934	542118	316	+	.	.
scaffold546	subtractBed	intrn	542108	542517	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	542108	542517	437	+	.	.
scaffold546	subtractBed	intrn	542353	542491	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	542353	542491	59	+	.	.
scaffold546	subtractBed	intrn	542365	542479	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	542365	542479	82	+	.	.
scaffold546	subtractBed	intrn	542486	542648	.	+	.	Parent=CGI_10021008;
	scaffold546	TRF	Tandem_Repeat	542486	542648	254	+	.	.
scaffold546	subtractBed	intrn	579304	579379	.	+	.	Parent=CGI_10021013;
	scaffold546	TRF	Tandem_Repeat	579304	579379	152	+	.	.
scaffold546	subtractBed	intrn	586446	586503	.	+	.	Parent=CGI_10021013;
	scaffold546	TRF	Tandem_Repeat	586446	586503	116	+	.	.
scaffold546	subtractBed	intrn	579304	579379	.	-	.	Parent=CGI_10021014;
	scaffold546	TRF	Tandem_Repeat	579304	579379	152	+	.	.
scaffold546	subtractBed	intrn	594833	594858	.	-	.	Parent=CGI_10021015;
	scaffold546	TRF	Tandem_Repeat	594833	594858	52	+	.	.
scaffold546	subtractBed	intrn	608254	608297	.	-	.	Parent=CGI_10021015;
	scaffold546	TRF	Tandem_Repeat	608254	608297	88	+	.	.
scaffold546	subtractBed	intrn	613344	614027	.	-	.	Parent=CGI_10021015;
	scaffold546	TRF	Tandem_Repeat	613344	614027	918	+	.	.
scaffold546	subtractBed	intrn	641526	641587	.	+	.	Parent=CGI_10021018;
	scaffold546	TRF	Tandem_Repeat	641526	641587	124	+	.	.
scaffold546	subtractBed	intrn	662918	662946	.	-	.	Parent=CGI_10021020;
	scaffold546	TRF	Tandem_Repeat	662918	662946	58	+	.	.
scaffold547	subtractBed	intrn	87792	88269	.	+	.	Parent=CGI_10018842;
	scaffold547	TRF	Tandem_Repeat	87792	88269	498	+	.	.
scaffold547	subtractBed	intrn	87792	88269	.	+	.	Parent=CGI_10018842;
	scaffold547	TRF	Tandem_Repeat	87792	88269	510	+	.	.
scaffold547	subtractBed	intrn	129244	129285	.	+	.	Parent=CGI_10018842;
	scaffold547	TRF	Tandem_Repeat	129244	129285	84	+	.	.
scaffold547	subtractBed	intrn	135667	135818	.	+	.	Parent=CGI_10018842;
	scaffold547	TRF	Tandem_Repeat	135667	135818	107	+	.	.
scaffold547	subtractBed	intrn	137230	137271	.	+	.	Parent=CGI_10018842;
	scaffold547	TRF	Tandem_Repeat	137230	137271	50	+	.	.
scaffold547	subtractBed	intrn	206823	207068	.	+	.	Parent=CGI_10018847;
	scaffold547	WUBlastX	DNA_TcMar-Pogo	206823	207068	136	-	.	.
scaffold547	subtractBed	intrn	206733	207044	.	+	.	Parent=CGI_10018847;
	scaffold547	WUBlastX	DNA_TcMar-Tigge	206733	207044	64	-	.	.
scaffold547	subtractBed	intrn	330551	330610	.	+	.	Parent=CGI_10018854;
	scaffold547	TRF	Tandem_Repeat	330551	330610	93	+	.	.
scaffold547	subtractBed	intrn	339092	339126	.	+	.	Parent=CGI_10018854;
	scaffold547	TRF	Tandem_Repeat	339092	339126	61	+	.	.
scaffold547	subtractBed	intrn	431956	432198	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	DNA_Kolobok-IS4	431956	432198	20	-	.	.
scaffold547	subtractBed	intrn	432225	432524	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	DNA_Kolobok-IS4	432225	432524	41	-	.	.
scaffold547	subtractBed	intrn	429623	429841	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	LTR_Ngaro	429623	429841	26	+	.	.
scaffold547	subtractBed	intrn	429638	429799	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	LTR_Ngaro	429638	429799	52	+	.	.
scaffold547	subtractBed	intrn	430314	430430	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	LTR_Ngaro	430314	430430	36	+	.	.
scaffold547	subtractBed	intrn	429502	429603	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	LTR_Ngaro	429502	429603	24	+	.	.
scaffold547	subtractBed	intrn	429517	429600	.	-	.	Parent=CGI_10018857;
	scaffold547	WUBlastX	LTR_Ngaro	429517	429600	28	+	.	.
scaffold547	subtractBed	intrn	454083	454664	.	+	.	Parent=CGI_10018858;
	scaffold547	WUBlastX	LTR_Gypsy	454083	454664	114	+	.	.
scaffold547	subtractBed	intrn	454080	454526	.	+	.	Parent=CGI_10018858;
	scaffold547	WUBlastX	LTR_Gypsy-Cigr	454080	454526	149	+	.	.
scaffold549	subtractBed	intrn	8122	8202	.	+	.	Parent=CGI_10004100;
	scaffold549	WUBlastX	LINE_RTE-X	8122	8202	36	-	.	.
scaffold549	subtractBed	intrn	8416	8565	.	+	.	Parent=CGI_10004100;
	scaffold549	WUBlastX	LINE_RTE-X	8416	8565	26	-	.	.
scaffold549	subtractBed	intrn	8416	8481	.	+	.	Parent=CGI_10004100;
	scaffold549	WUBlastX	LINE_RTE-X	8416	8481	39	-	.	.
scaffold549	subtractBed	intrn	8536	8565	.	+	.	Parent=CGI_10004100;
	scaffold549	WUBlastX	LINE_RTE-X	8536	8565	29	-	.	.
scaffold549	subtractBed	intrn	20229	20366	.	-	.	Parent=CGI_10004102;
	scaffold549	TRF	Tandem_Repeat	20229	20366	267	+	.	.
scaffold549	subtractBed	intrn	20393	20542	.	-	.	Parent=CGI_10004102;
	scaffold549	TRF	Tandem_Repeat	20393	20542	124	+	.	.
scaffold549	subtractBed	intrn	21017	21246	.	-	.	Parent=CGI_10004102;
	scaffold549	TRF	Tandem_Repeat	21017	21246	379	+	.	.
scaffold549	subtractBed	intrn	21601	22072	.	-	.	Parent=CGI_10004102;
	scaffold549	TRF	Tandem_Repeat	21601	22072	450	+	.	.
scaffold549	subtractBed	intrn	32703	32739	.	+	.	Parent=CGI_10004103;
	scaffold549	TRF	Tandem_Repeat	32703	32739	65	+	.	.
scaffold549	subtractBed	intrn	35357	36737	.	+	.	Parent=CGI_10004103;
	scaffold549	TRF	Tandem_Repeat	35357	36737	1971	+	.	.
scaffold549	subtractBed	intrn	37445	37743	.	+	.	Parent=CGI_10004103;
	scaffold549	TRF	Tandem_Repeat	37445	37743	293	+	.	.
scaffold549	subtractBed	intrn	53551	53584	.	+	.	Parent=CGI_10004103;
	scaffold549	TRF	Tandem_Repeat	53551	53584	61	+	.	.
scaffold549	subtractBed	intrn	60496	60547	.	+	.	Parent=CGI_10004103;
	scaffold549	TRF	Tandem_Repeat	60496	60547	68	+	.	.
scaffold549	subtractBed	intrn	59385	59585	.	+	.	Parent=CGI_10004103;
	scaffold549	WUBlastX	LINE_RTE-BovB	59385	59585	153	+	.	.
scaffold549	subtractBed	intrn	59563	59670	.	+	.	Parent=CGI_10004103;
	scaffold549	WUBlastX	LINE_RTE-BovB	59563	59670	55	+	.	.
scaffold549	subtractBed	intrn	59078	59395	.	+	.	Parent=CGI_10004103;
	scaffold549	WUBlastX	LINE_RTE-BovB	59078	59395	369	+	.	.
scaffold549	subtractBed	intrn	59660	59884	.	+	.	Parent=CGI_10004103;
	scaffold549	WUBlastX	LINE_RTE-BovB	59660	59884	131	+	.	.
scaffold549	subtractBed	intrn	53551	53584	.	-	.	Parent=CGI_10004104;
	scaffold549	TRF	Tandem_Repeat	53551	53584	61	+	.	.
scaffold549	subtractBed	intrn	60496	60547	.	-	.	Parent=CGI_10004104;
	scaffold549	TRF	Tandem_Repeat	60496	60547	68	+	.	.
scaffold549	subtractBed	intrn	59385	59585	.	-	.	Parent=CGI_10004104;
	scaffold549	WUBlastX	LINE_RTE-BovB	59385	59585	153	+	.	.
scaffold549	subtractBed	intrn	59563	59670	.	-	.	Parent=CGI_10004104;
	scaffold549	WUBlastX	LINE_RTE-BovB	59563	59670	55	+	.	.
scaffold549	subtractBed	intrn	59078	59395	.	-	.	Parent=CGI_10004104;
	scaffold549	WUBlastX	LINE_RTE-BovB	59078	59395	369	+	.	.
scaffold549	subtractBed	intrn	59660	59884	.	-	.	Parent=CGI_10004104;
	scaffold549	WUBlastX	LINE_RTE-BovB	59660	59884	131	+	.	.
scaffold550	subtractBed	intrn	30322	30350	.	+	.	Parent=CGI_10012482;
	scaffold550	TRF	Tandem_Repeat	30322	30350	58	+	.	.
scaffold550	subtractBed	intrn	30350	30406	.	+	.	Parent=CGI_10012482;
	scaffold550	TRF	Tandem_Repeat	30350	30406	114	+	.	.
scaffold550	subtractBed	intrn	35193	35234	.	+	.	Parent=CGI_10012482;
	scaffold550	TRF	Tandem_Repeat	35193	35234	68	+	.	.
scaffold550	subtractBed	intrn	45983	45986	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	45983	46156	41	+	.	.
scaffold550	subtractBed	intrn	46143	46156	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	45983	46156	41	+	.	.
scaffold550	subtractBed	intrn	55836	55882	.	+	.	Parent=CGI_10012483;
	scaffold550	TRF	Tandem_Repeat	55836	55882	94	+	.	.
scaffold550	subtractBed	intrn	56303	56342	.	+	.	Parent=CGI_10012483;
	scaffold550	TRF	Tandem_Repeat	56303	56342	80	+	.	.
scaffold550	subtractBed	intrn	57209	57670	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	57209	57670	70	-	.	.
scaffold550	subtractBed	intrn	54909	55277	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	54909	55277	248	-	.	.
scaffold550	subtractBed	intrn	56495	56614	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	56495	56614	133	-	.	.
scaffold550	subtractBed	intrn	57209	57577	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	57209	57577	119	-	.	.
scaffold550	subtractBed	intrn	56147	56266	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	56147	56266	66	-	.	.
scaffold550	subtractBed	intrn	56129	56221	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	56129	56221	35	-	.	.
scaffold550	subtractBed	intrn	56456	56617	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	DNA_Harbinger	56456	56617	98	-	.	.
scaffold550	subtractBed	intrn	61940	62035	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1-Tx1	61940	62035	20	-	.	.
scaffold550	subtractBed	intrn	59567	61198	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1-Tx1	59567	61198	225	-	.	.
scaffold550	subtractBed	intrn	61206	61277	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1-Tx1	61206	61277	63	-	.	.
scaffold550	subtractBed	intrn	61206	61319	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1	61206	61319	46	-	.	.
scaffold550	subtractBed	intrn	61209	61301	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1-Tx1	61209	61301	55	-	.	.
scaffold550	subtractBed	intrn	61197	61367	.	+	.	Parent=CGI_10012483;
	scaffold550	WUBlastX	LINE_L1	61197	61367	44	-	.	.
scaffold550	subtractBed	intrn	86569	86611	.	+	.	Parent=CGI_10012485;
	scaffold550	TRF	Tandem_Repeat	86569	86611	86	+	.	.
scaffold550	subtractBed	intrn	101574	101616	.	+	.	Parent=CGI_10012486;
	scaffold550	TRF	Tandem_Repeat	101574	101616	86	+	.	.
scaffold550	subtractBed	intrn	113158	113423	.	+	.	Parent=CGI_10012486;
	scaffold550	TRF	Tandem_Repeat	113158	113423	345	+	.	.
scaffold550	subtractBed	intrn	118680	120271	.	-	.	Parent=CGI_10012488;
	scaffold550	TRF	Tandem_Repeat	118680	120271	1965	+	.	.
scaffold550	subtractBed	intrn	120440	120494	.	-	.	Parent=CGI_10012488;
	scaffold550	TRF	Tandem_Repeat	120440	120494	78	+	.	.
scaffold550	subtractBed	intrn	121027	121059	.	-	.	Parent=CGI_10012488;
	scaffold550	TRF	Tandem_Repeat	121027	121059	66	+	.	.
scaffold550	subtractBed	intrn	128919	128964	.	+	.	Parent=CGI_10012489;
	scaffold550	TRF	Tandem_Repeat	128919	128964	92	+	.	.
scaffold550	subtractBed	intrn	151397	151463	.	-	.	Parent=CGI_10012490;
	scaffold550	TRF	Tandem_Repeat	151397	151463	98	+	.	.
scaffold550	subtractBed	intrn	150305	151396	.	-	.	Parent=CGI_10012490;
	scaffold550	WUBlastX	DNA_Helitron	150305	151396	175	-	.	.
scaffold550	subtractBed	intrn	149373	149684	.	-	.	Parent=CGI_10012490;
	scaffold550	WUBlastX	RC_Helitron	149373	149684	41	-	.	.
scaffold550	subtractBed	intrn	150734	151387	.	-	.	Parent=CGI_10012490;
	scaffold550	WUBlastX	RC_Helitron	150734	151387	251	-	.	.
scaffold550	subtractBed	intrn	149470	150264	.	-	.	Parent=CGI_10012490;
	scaffold550	WUBlastX	DNA_Helitron	149470	150264	128	-	.	.
scaffold550	subtractBed	intrn	192658	193503	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	192658	193503	495	-	.	.
scaffold550	subtractBed	intrn	194263	194850	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	194263	194850	147	-	.	.
scaffold550	subtractBed	intrn	193655	194092	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	193655	194092	148	-	.	.
scaffold550	subtractBed	intrn	194008	194847	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	194008	194847	132	-	.	.
scaffold550	subtractBed	intrn	195197	195304	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	195197	195304	24	-	.	.
scaffold550	subtractBed	intrn	193529	193993	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	193529	193993	294	-	.	.
scaffold550	subtractBed	intrn	192469	193500	.	+	.	Parent=CGI_10012493;
	scaffold550	WUBlastX	LTR_Gypsy	192469	193500	304	-	.	.
scaffold550	subtractBed	intrn	197164	197265	.	+	.	Parent=CGI_10012493;
	scaffold550	TRF	Tandem_Repeat	197164	197265	170	+	.	.
scaffold552	subtractBed	intrn	3587	3644	.	-	.	Parent=CGI_10009317;
	scaffold552	TRF	Tandem_Repeat	3587	3644	107	+	.	.
scaffold552	subtractBed	intrn	38460	38494	.	+	.	Parent=CGI_10009318;
	scaffold552	TRF	Tandem_Repeat	38460	38494	70	+	.	.
scaffold552	subtractBed	intrn	44873	44946	.	+	.	Parent=CGI_10009318;
	scaffold552	TRF	Tandem_Repeat	44873	44946	148	+	.	.
scaffold552	subtractBed	intrn	49579	49621	.	+	.	Parent=CGI_10009319;
	scaffold552	TRF	Tandem_Repeat	49579	49621	77	+	.	.
scaffold552	subtractBed	intrn	70424	70669	.	+	.	Parent=CGI_10009321;
	scaffold552	WUBlastX	LTR_DIRS	70424	70669	100	+	.	.
scaffold552	subtractBed	intrn	70403	70741	.	+	.	Parent=CGI_10009321;
	scaffold552	WUBlastX	LTR_DIRS	70403	70741	96	+	.	.
scaffold552	subtractBed	intrn	178430	178479	.	+	.	Parent=CGI_10009325;
	scaffold552	TRF	Tandem_Repeat	178430	178479	73	+	.	.
scaffold552	subtractBed	intrn	179598	179645	.	+	.	Parent=CGI_10009325;
	scaffold552	WUBlastX	LINE_RTE-X	179598	179645	21	-	.	.
scaffold552	subtractBed	intrn	179228	179470	.	+	.	Parent=CGI_10009325;
	scaffold552	WUBlastX	LINE_RTE-X	179228	179470	48	-	.	.
scaffold552	subtractBed	intrn	191292	192811	.	-	.	Parent=CGI_10009326;
	scaffold552	TRF	Tandem_Repeat	191292	192811	2170	+	.	.
scaffold552	subtractBed	intrn	192973	193034	.	-	.	Parent=CGI_10009326;
	scaffold552	TRF	Tandem_Repeat	192973	193034	72	+	.	.
scaffold552	subtractBed	intrn	198771	198817	.	+	.	Parent=CGI_10009327;
	scaffold552	TRF	Tandem_Repeat	198771	198817	94	+	.	.
scaffold552	subtractBed	intrn	199605	199801	.	+	.	Parent=CGI_10009327;
	scaffold552	TRF	Tandem_Repeat	199605	199801	234	+	.	.
scaffold556	subtractBed	intrn	20863	20906	.	-	.	Parent=CGI_10016790;
	scaffold556	TRF	Tandem_Repeat	20863	20906	72	+	.	.
scaffold556	subtractBed	intrn	23282	23342	.	-	.	Parent=CGI_10016790;
	scaffold556	TRF	Tandem_Repeat	23282	23342	65	+	.	.
scaffold556	subtractBed	intrn	23282	23342	.	-	.	Parent=CGI_10016790;
	scaffold556	TRF	Tandem_Repeat	23282	23342	74	+	.	.
scaffold556	subtractBed	intrn	78254	78302	.	-	.	Parent=CGI_10016796;
	scaffold556	TRF	Tandem_Repeat	78254	78302	98	+	.	.
scaffold556	subtractBed	intrn	181986	182130	.	+	.	Parent=CGI_10016800;
	scaffold556	TRF	Tandem_Repeat	181986	182130	193	+	.	.
scaffold556	subtractBed	intrn	182558	182600	.	+	.	Parent=CGI_10016800;
	scaffold556	TRF	Tandem_Repeat	182558	182600	68	+	.	.
scaffold556	subtractBed	intrn	194506	194718	.	-	.	Parent=CGI_10016802;
	scaffold556	WUBlastX	LINE_L1-Tx1	194506	194718	70	+	.	.
scaffold556	subtractBed	intrn	194300	194449	.	-	.	Parent=CGI_10016802;
	scaffold556	WUBlastX	LINE_L1	194300	194449	69	+	.	.
scaffold556	subtractBed	intrn	194300	194506	.	-	.	Parent=CGI_10016802;
	scaffold556	WUBlastX	LINE_L1-Tx1	194300	194506	49	+	.	.
scaffold556	subtractBed	intrn	194261	194437	.	-	.	Parent=CGI_10016802;
	scaffold556	WUBlastX	LINE_L1-Tx1	194261	194437	53	+	.	.
scaffold556	subtractBed	intrn	222614	223414	.	-	.	Parent=CGI_10016803;
	scaffold556	TRF	Tandem_Repeat	222614	223414	1350	+	.	.
scaffold556	subtractBed	intrn	223428	223513	.	-	.	Parent=CGI_10016803;
	scaffold556	TRF	Tandem_Repeat	223428	223513	118	+	.	.
scaffold556	subtractBed	intrn	223428	223513	.	-	.	Parent=CGI_10016803;
	scaffold556	TRF	Tandem_Repeat	223428	223513	145	+	.	.
scaffold556	subtractBed	intrn	237379	237495	.	-	.	Parent=CGI_10016803;
	scaffold556	TRF	Tandem_Repeat	237379	237495	137	+	.	.
scaffold556	subtractBed	intrn	240679	241160	.	-	.	Parent=CGI_10016803;
	scaffold556	TRF	Tandem_Repeat	240679	241160	784	+	.	.
scaffold556	subtractBed	intrn	278229	278274	.	-	.	Parent=CGI_10016806;
	scaffold556	TRF	Tandem_Repeat	278229	278274	51	+	.	.
scaffold556	subtractBed	intrn	280204	280311	.	-	.	Parent=CGI_10016806;
	scaffold556	WUBlastX	LINE_RTE-X	280204	280311	26	+	.	.
scaffold556	subtractBed	intrn	371620	371650	.	-	.	Parent=CGI_10016806;
	scaffold556	TRF	Tandem_Repeat	371620	371650	53	+	.	.
scaffold556	subtractBed	intrn	417324	417421	.	-	.	Parent=CGI_10016808;
	scaffold556	TRF	Tandem_Repeat	417324	417421	137	+	.	.
scaffold556	subtractBed	intrn	436671	437003	.	-	.	Parent=CGI_10016808;
	scaffold556	TRF	Tandem_Repeat	436671	437003	277	+	.	.
scaffold556	subtractBed	intrn	436671	437018	.	-	.	Parent=CGI_10016808;
	scaffold556	TRF	Tandem_Repeat	436671	437018	402	+	.	.
scaffold556	subtractBed	intrn	449656	449852	.	-	.	Parent=CGI_10016808;
	scaffold556	TRF	Tandem_Repeat	449656	449852	313	+	.	.
scaffold556	subtractBed	intrn	456822	456866	.	-	.	Parent=CGI_10016808;
	scaffold556	TRF	Tandem_Repeat	456822	456866	65	+	.	.
scaffold557	subtractBed	intrn	2865	3524	.	+	.	Parent=CGI_10017962;
	scaffold557	TRF	Tandem_Repeat	2865	3524	898	+	.	.
scaffold557	subtractBed	intrn	18129	18473	.	-	.	Parent=CGI_10017964;
	scaffold557	TRF	Tandem_Repeat	18129	18473	302	+	.	.
scaffold557	subtractBed	intrn	22298	22346	.	-	.	Parent=CGI_10017964;
	scaffold557	TRF	Tandem_Repeat	22298	22346	50	+	.	.
scaffold557	subtractBed	intrn	23494	24356	.	-	.	Parent=CGI_10017964;
	scaffold557	TRF	Tandem_Repeat	23494	24356	1222	+	.	.
scaffold557	subtractBed	intrn	24601	24648	.	-	.	Parent=CGI_10017964;
	scaffold557	TRF	Tandem_Repeat	24601	24648	96	+	.	.
scaffold557	subtractBed	intrn	54313	54891	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	54313	54891	952	+	.	.
scaffold557	subtractBed	intrn	54313	54891	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	54313	54891	989	+	.	.
scaffold557	subtractBed	intrn	59965	60259	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	59965	60259	527	+	.	.
scaffold557	subtractBed	intrn	60302	60703	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	60302	60703	732	+	.	.
scaffold557	subtractBed	intrn	62339	64006	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	62339	64006	1150	+	.	.
scaffold557	subtractBed	intrn	62352	64006	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	62352	64006	1475	+	.	.
scaffold557	subtractBed	intrn	62352	64006	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	62352	64006	1347	+	.	.
scaffold557	subtractBed	intrn	64790	64938	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	64790	64938	97	+	.	.
scaffold557	subtractBed	intrn	65917	66711	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	65917	66711	931	+	.	.
scaffold557	subtractBed	intrn	68165	68524	.	-	.	Parent=CGI_10017966;
	scaffold557	WUBlastX	LINE_L1-Tx1	68165	68524	49	-	.	.
scaffold557	subtractBed	intrn	72590	73510	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	72590	73510	1227	+	.	.
scaffold557	subtractBed	intrn	72590	73510	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	72590	73510	1254	+	.	.
scaffold557	subtractBed	intrn	72590	73510	.	-	.	Parent=CGI_10017966;
	scaffold557	TRF	Tandem_Repeat	72590	73510	1270	+	.	.
scaffold557	subtractBed	intrn	226543	226792	.	-	.	Parent=CGI_10017967;
	scaffold557	TRF	Tandem_Repeat	226543	226792	428	+	.	.
scaffold557	subtractBed	intrn	258624	258728	.	-	.	Parent=CGI_10017970;
	scaffold557	TRF	Tandem_Repeat	258624	258728	86	+	.	.
scaffold557	subtractBed	intrn	260311	260407	.	-	.	Parent=CGI_10017970;
	scaffold557	TRF	Tandem_Repeat	260311	260407	77	+	.	.
scaffold557	subtractBed	intrn	275960	276032	.	+	.	Parent=CGI_10017971;
	scaffold557	TRF	Tandem_Repeat	275960	276032	60	+	.	.
scaffold557	subtractBed	intrn	275985	276030	.	+	.	Parent=CGI_10017971;
	scaffold557	TRF	Tandem_Repeat	275985	276030	58	+	.	.
scaffold557	subtractBed	intrn	366445	366657	.	-	.	Parent=CGI_10017977;
	scaffold557	WUBlastX	DNA_Chapaev	366445	366657	34	-	.	.
scaffold557	subtractBed	intrn	389613	390363	.	-	.	Parent=CGI_10017978;
	scaffold557	WUBlastX	LINE_CR1	389590	390363	190	-	.	.
scaffold557	subtractBed	intrn	389613	390012	.	-	.	Parent=CGI_10017978;
	scaffold557	WUBlastX	LINE_I	389110	390012	23	-	.	.
scaffold557	subtractBed	intrn	389613	389763	.	-	.	Parent=CGI_10017978;
	scaffold557	WUBlastX	LINE_L1	389434	389763	28	-	.	.
scaffold557	subtractBed	intrn	397509	397930	.	-	.	Parent=CGI_10017978;
	scaffold557	WUBlastX	RC_Helitron	397509	397940	73	-	.	.
scaffold557	subtractBed	intrn	405853	405885	.	+	.	Parent=CGI_10017980;
	scaffold557	TRF	Tandem_Repeat	405853	405885	66	+	.	.
scaffold557	subtractBed	intrn	408825	408858	.	+	.	Parent=CGI_10017980;
	scaffold557	TRF	Tandem_Repeat	408825	408858	68	+	.	.
scaffold557	subtractBed	intrn	401993	402940	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1-Tx1	401993	402940	533	+	.	.
scaffold557	subtractBed	intrn	402925	403446	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1-Tx1	402925	403446	210	+	.	.
scaffold557	subtractBed	intrn	403446	403691	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1-Tx1	403446	403691	50	+	.	.
scaffold557	subtractBed	intrn	401965	402090	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1	401965	402090	54	+	.	.
scaffold557	subtractBed	intrn	401696	401776	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_Jockey	401696	401776	21	+	.	.
scaffold557	subtractBed	intrn	403449	403592	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1	403449	403592	72	+	.	.
scaffold557	subtractBed	intrn	401779	402081	.	+	.	Parent=CGI_10017980;
	scaffold557	WUBlastX	LINE_L1	401779	402081	39	+	.	.
scaffold557	subtractBed	intrn	411290	411516	.	+	.	Parent=CGI_10017980;
	scaffold557	TRF	Tandem_Repeat	411290	411516	346	+	.	.
scaffold557	subtractBed	intrn	429425	429569	.	+	.	Parent=CGI_10017982;
	scaffold557	TRF	Tandem_Repeat	429425	429569	265	+	.	.
scaffold557	subtractBed	intrn	449324	449373	.	+	.	Parent=CGI_10017982;
	scaffold557	TRF	Tandem_Repeat	449324	449373	100	+	.	.
scaffold557	subtractBed	intrn	464673	464724	.	+	.	Parent=CGI_10017984;
	scaffold557	TRF	Tandem_Repeat	464673	464724	104	+	.	.
scaffold557	subtractBed	intrn	470402	470461	.	-	.	Parent=CGI_10017985;
	scaffold557	TRF	Tandem_Repeat	470402	470461	120	+	.	.
scaffold557	subtractBed	intrn	470402	470461	.	+	.	Parent=CGI_10017986;
	scaffold557	TRF	Tandem_Repeat	470402	470461	120	+	.	.
scaffold557	subtractBed	intrn	480086	480155	.	+	.	Parent=CGI_10017987;
	scaffold557	TRF	Tandem_Repeat	480086	480155	52	+	.	.
scaffold557	subtractBed	intrn	495983	496042	.	+	.	Parent=CGI_10017988;
	scaffold557	TRF	Tandem_Repeat	495983	496042	120	+	.	.
scaffold557	subtractBed	intrn	500807	500852	.	+	.	Parent=CGI_10017988;
	scaffold557	TRF	Tandem_Repeat	500807	500852	92	+	.	.
scaffold557	subtractBed	intrn	518949	519235	.	-	.	Parent=CGI_10017992;
	scaffold557	TRF	Tandem_Repeat	518949	519235	459	+	.	.
scaffold557	subtractBed	intrn	519368	519637	.	-	.	Parent=CGI_10017992;
	scaffold557	TRF	Tandem_Repeat	519368	519637	231	+	.	.
scaffold557	subtractBed	intrn	519719	520032	.	-	.	Parent=CGI_10017992;
	scaffold557	TRF	Tandem_Repeat	519719	520032	175	+	.	.
scaffold557	subtractBed	intrn	524180	524212	.	-	.	Parent=CGI_10017992;
	scaffold557	TRF	Tandem_Repeat	524180	524212	66	+	.	.
scaffold557	subtractBed	intrn	521832	522035	.	-	.	Parent=CGI_10017992;
	scaffold557	WUBlastX	DNA_Maverick	521832	522035	43	-	.	.
scaffold557	subtractBed	intrn	523012	523521	.	-	.	Parent=CGI_10017992;
	scaffold557	WUBlastX	DNA_Maverick	523012	523521	120	-	.	.
scaffold557	subtractBed	intrn	522082	523521	.	-	.	Parent=CGI_10017992;
	scaffold557	WUBlastX	DNA_Maverick	522082	523521	51	-	.	.
scaffold559	subtractBed	intrn	36614	36721	.	+	.	Parent=CGI_10003340;
	scaffold559	WUBlastX	DNA_P	36254	36721	46	+	.	.
scaffold560	subtractBed	intrn	8485	8631	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	8485	8631	125	+	.	.
scaffold560	subtractBed	intrn	8630	8816	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	8630	8816	178	+	.	.
scaffold560	subtractBed	intrn	8904	8990	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	8904	8990	131	+	.	.
scaffold560	subtractBed	intrn	7513	8442	.	-	.	Parent=CGI_10008749;
	scaffold560	WUBlastX	LTR_DIRS	7513	8442	88	-	.	.
scaffold560	subtractBed	intrn	10030	10081	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	10030	10081	104	+	.	.
scaffold560	subtractBed	intrn	13291	13355	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	13291	13355	76	+	.	.
scaffold560	subtractBed	intrn	13910	14353	.	-	.	Parent=CGI_10008749;
	scaffold560	TRF	Tandem_Repeat	13910	14380	667	+	.	.
scaffold560	subtractBed	intrn	8485	8631	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	8485	8631	125	+	.	.
scaffold560	subtractBed	intrn	8630	8816	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	8630	8816	178	+	.	.
scaffold560	subtractBed	intrn	8904	8990	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	8904	8990	131	+	.	.
scaffold560	subtractBed	intrn	7513	8442	.	+	.	Parent=CGI_10008750;
	scaffold560	WUBlastX	LTR_DIRS	7513	8442	88	-	.	.
scaffold560	subtractBed	intrn	10030	10081	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	10030	10081	104	+	.	.
scaffold560	subtractBed	intrn	13291	13355	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	13291	13355	76	+	.	.
scaffold560	subtractBed	intrn	13910	14353	.	+	.	Parent=CGI_10008750;
	scaffold560	TRF	Tandem_Repeat	13910	14380	667	+	.	.
scaffold560	subtractBed	intrn	145002	145124	.	+	.	Parent=CGI_10008753;
	scaffold560	TRF	Tandem_Repeat	145002	145124	77	+	.	.
scaffold560	subtractBed	intrn	139815	139979	.	+	.	Parent=CGI_10008753;
	scaffold560	WUBlastX	LINE_RTE-X	139815	139979	93	-	.	.
scaffold560	subtractBed	intrn	139806	140036	.	+	.	Parent=CGI_10008753;
	scaffold560	WUBlastX	LINE_RTE-X	139806	140036	89	-	.	.
scaffold560	subtractBed	intrn	139743	139967	.	+	.	Parent=CGI_10008753;
	scaffold560	WUBlastX	LINE_RTE-X	139743	139967	84	-	.	.
scaffold560	subtractBed	intrn	158391	158495	.	+	.	Parent=CGI_10008753;
	scaffold560	TRF	Tandem_Repeat	158391	158495	112	+	.	.
scaffold560	subtractBed	intrn	159640	159744	.	+	.	Parent=CGI_10008753;
	scaffold560	TRF	Tandem_Repeat	159640	159744	103	+	.	.
scaffold560	subtractBed	intrn	168967	169150	.	-	.	Parent=CGI_10008754;
	scaffold560	TRF	Tandem_Repeat	168967	169150	242	+	.	.
scaffold560	subtractBed	intrn	193786	193825	.	-	.	Parent=CGI_10008757;
	scaffold560	TRF	Tandem_Repeat	193786	193825	53	+	.	.
scaffold560	subtractBed	intrn	193789	193825	.	-	.	Parent=CGI_10008757;
	scaffold560	TRF	Tandem_Repeat	193789	193825	65	+	.	.
scaffold560	subtractBed	intrn	199361	199459	.	-	.	Parent=CGI_10008757;
	scaffold560	TRF	Tandem_Repeat	199361	199459	118	+	.	.
scaffold560	subtractBed	intrn	211709	211751	.	-	.	Parent=CGI_10008758;
	scaffold560	TRF	Tandem_Repeat	211709	211751	59	+	.	.
scaffold560	subtractBed	intrn	208299	208424	.	-	.	Parent=CGI_10008758;
	scaffold560	WUBlastX	LINE_L1-Tx1	208299	208424	74	+	.	.
scaffold562	subtractBed	intrn	133666	133711	.	+	.	Parent=CGI_10016079;
	scaffold562	TRF	Tandem_Repeat	133666	133711	51	+	.	.
scaffold562	subtractBed	intrn	233585	233639	.	+	.	Parent=CGI_10016086;
	scaffold562	TRF	Tandem_Repeat	233585	233639	110	+	.	.
scaffold562	subtractBed	intrn	284774	284899	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	284774	284899	141	+	.	.
scaffold562	subtractBed	intrn	284774	284899	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	284774	284899	166	+	.	.
scaffold562	subtractBed	intrn	285144	285182	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	285144	285182	78	+	.	.
scaffold562	subtractBed	intrn	286099	286134	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	286099	286134	72	+	.	.
scaffold562	subtractBed	intrn	286379	286514	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	286379	286514	147	+	.	.
scaffold562	subtractBed	intrn	286379	286514	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	286379	286514	175	+	.	.
scaffold562	subtractBed	intrn	288884	288989	.	+	.	Parent=CGI_10016091;
	scaffold562	TRF	Tandem_Repeat	288884	288989	167	+	.	.
scaffold562	subtractBed	intrn	296903	297091	.	+	.	Parent=CGI_10016091;
	scaffold562	WUBlastX	LINE_CR1-L2	296903	297091	70	-	.	.
scaffold562	subtractBed	intrn	307660	307742	.	+	.	Parent=CGI_10016093;
	scaffold562	TRF	Tandem_Repeat	307660	307742	130	+	.	.
scaffold562	subtractBed	intrn	308575	308612	.	+	.	Parent=CGI_10016093;
	scaffold562	TRF	Tandem_Repeat	308575	308612	51	+	.	.
scaffold562	subtractBed	intrn	324202	325850	.	-	.	Parent=CGI_10016097;
	scaffold562	TRF	Tandem_Repeat	324202	325850	2089	+	.	.
scaffold562	subtractBed	intrn	336624	337495	.	+	.	Parent=CGI_10016098;
	scaffold562	TRF	Tandem_Repeat	336624	337495	1268	+	.	.
scaffold562	subtractBed	intrn	355095	355124	.	+	.	Parent=CGI_10016100;
	scaffold562	TRF	Tandem_Repeat	355095	355124	60	+	.	.
scaffold562	subtractBed	intrn	363519	363566	.	+	.	Parent=CGI_10016100;
	scaffold562	TRF	Tandem_Repeat	363519	363566	96	+	.	.
scaffold562	subtractBed	intrn	396018	396062	.	+	.	Parent=CGI_10016101;
	scaffold562	TRF	Tandem_Repeat	396018	396062	90	+	.	.
scaffold563	subtractBed	intrn	37560	37680	.	-	.	Parent=CGI_10019817;
	scaffold563	TRF	Tandem_Repeat	37560	37680	127	+	.	.
scaffold563	subtractBed	intrn	39353	39389	.	-	.	Parent=CGI_10019817;
	scaffold563	TRF	Tandem_Repeat	39353	39389	74	+	.	.
scaffold563	subtractBed	intrn	43539	43578	.	-	.	Parent=CGI_10019817;
	scaffold563	TRF	Tandem_Repeat	43539	43578	55	+	.	.
scaffold563	subtractBed	intrn	48535	48783	.	-	.	Parent=CGI_10019817;
	scaffold563	WUBlastX	LINE_RTE-X	48535	48783	41	-	.	.
scaffold563	subtractBed	intrn	48922	48978	.	-	.	Parent=CGI_10019817;
	scaffold563	WUBlastX	LINE_RTE-X	48922	48978	25	-	.	.
scaffold563	subtractBed	intrn	51201	51254	.	-	.	Parent=CGI_10019817;
	scaffold563	TRF	Tandem_Repeat	51201	51254	72	+	.	.
scaffold563	subtractBed	intrn	54336	54399	.	-	.	Parent=CGI_10019817;
	scaffold563	TRF	Tandem_Repeat	54336	54399	83	+	.	.
scaffold563	subtractBed	intrn	82238	82276	.	+	.	Parent=CGI_10019818;
	scaffold563	TRF	Tandem_Repeat	82238	82276	69	+	.	.
scaffold563	subtractBed	intrn	89934	89983	.	+	.	Parent=CGI_10019820;
	scaffold563	TRF	Tandem_Repeat	89934	89983	100	+	.	.
scaffold563	subtractBed	intrn	94375	94474	.	+	.	Parent=CGI_10019820;
	scaffold563	TRF	Tandem_Repeat	94375	94474	164	+	.	.
scaffold563	subtractBed	intrn	94357	94474	.	+	.	Parent=CGI_10019820;
	scaffold563	TRF	Tandem_Repeat	94357	94474	139	+	.	.
scaffold563	subtractBed	intrn	94907	94942	.	+	.	Parent=CGI_10019820;
	scaffold563	TRF	Tandem_Repeat	94907	94942	72	+	.	.
scaffold563	subtractBed	intrn	97563	97685	.	+	.	Parent=CGI_10019820;
	scaffold563	TRF	Tandem_Repeat	97563	97685	176	+	.	.
scaffold563	subtractBed	intrn	194947	194987	.	+	.	Parent=CGI_10019823;
	scaffold563	TRF	Tandem_Repeat	194947	194987	82	+	.	.
scaffold563	subtractBed	intrn	224070	224426	.	-	.	Parent=CGI_10019825;
	scaffold563	WUBlastX	LINE_Penelope	224070	224426	49	-	.	.
scaffold563	subtractBed	intrn	242363	242403	.	-	.	Parent=CGI_10019827;
	scaffold563	TRF	Tandem_Repeat	242363	242403	55	+	.	.
scaffold563	subtractBed	intrn	321914	322511	.	+	.	Parent=CGI_10019832;
	scaffold563	TRF	Tandem_Repeat	321914	322511	606	+	.	.
scaffold563	subtractBed	intrn	325598	325683	.	+	.	Parent=CGI_10019832;
	scaffold563	TRF	Tandem_Repeat	325598	325683	172	+	.	.
scaffold563	subtractBed	intrn	327840	327891	.	+	.	Parent=CGI_10019832;
	scaffold563	TRF	Tandem_Repeat	327840	327891	88	+	.	.
scaffold563	subtractBed	intrn	330936	331160	.	+	.	Parent=CGI_10019832;
	scaffold563	TRF	Tandem_Repeat	330936	331160	294	+	.	.
scaffold563	subtractBed	intrn	378060	378296	.	-	.	Parent=CGI_10019837;
	scaffold563	WUBlastX	LINE_RTE-X	378060	378296	59	+	.	.
scaffold563	subtractBed	intrn	384717	384769	.	+	.	Parent=CGI_10019838;
	scaffold563	TRF	Tandem_Repeat	384717	384769	106	+	.	.
scaffold563	subtractBed	intrn	407323	407375	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	407323	407375	97	+	.	.
scaffold563	subtractBed	intrn	409860	409945	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	409860	409945	172	+	.	.
scaffold563	subtractBed	intrn	414878	414970	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	414878	414970	96	+	.	.
scaffold563	subtractBed	intrn	414888	414978	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	414888	414978	110	+	.	.
scaffold563	subtractBed	intrn	417454	417505	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	417454	417505	104	+	.	.
scaffold563	subtractBed	intrn	418742	419092	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	418742	419092	195	+	.	.
scaffold563	subtractBed	intrn	418742	419131	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	418742	419131	182	+	.	.
scaffold563	subtractBed	intrn	418741	419092	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	418741	419092	275	+	.	.
scaffold563	subtractBed	intrn	418955	419131	.	-	.	Parent=CGI_10019840;
	scaffold563	TRF	Tandem_Repeat	418955	419131	137	+	.	.
scaffold563	subtractBed	intrn	424279	424320	.	+	.	Parent=CGI_10019842;
	scaffold563	TRF	Tandem_Repeat	424279	424320	84	+	.	.
scaffold563	subtractBed	intrn	429336	429572	.	+	.	Parent=CGI_10019842;
	scaffold563	TRF	Tandem_Repeat	429336	429572	402	+	.	.
scaffold563	subtractBed	intrn	429760	429935	.	+	.	Parent=CGI_10019842;
	scaffold563	TRF	Tandem_Repeat	429760	429935	262	+	.	.
scaffold563	subtractBed	intrn	473624	473663	.	+	.	Parent=CGI_10019843;
	scaffold563	TRF	Tandem_Repeat	473624	473663	62	+	.	.
scaffold563	subtractBed	intrn	495030	495066	.	+	.	Parent=CGI_10019843;
	scaffold563	TRF	Tandem_Repeat	495030	495066	74	+	.	.
scaffold563	subtractBed	intrn	498879	499651	.	+	.	Parent=CGI_10019843;
	scaffold563	TRF	Tandem_Repeat	498879	499651	1021	+	.	.
scaffold563	subtractBed	intrn	506183	506280	.	+	.	Parent=CGI_10019843;
	scaffold563	TRF	Tandem_Repeat	506183	506280	135	+	.	.
scaffold563	subtractBed	intrn	505578	505799	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	DNA_TcMar-Marin	505578	505799	87	-	.	.
scaffold563	subtractBed	intrn	505524	505829	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	DNA_TcMar-Marin	505524	505829	65	-	.	.
scaffold563	subtractBed	intrn	508533	508635	.	+	.	Parent=CGI_10019843;
	scaffold563	TRF	Tandem_Repeat	508533	508635	145	+	.	.
scaffold563	subtractBed	intrn	511248	511478	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	LINE_L1-Tx1	511248	511478	38	+	.	.
scaffold563	subtractBed	intrn	509282	511066	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	LINE_L1-Tx1	509282	511066	408	+	.	.
scaffold563	subtractBed	intrn	509094	509255	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	LINE_L1	509094	509255	32	+	.	.
scaffold563	subtractBed	intrn	509282	510442	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	LINE_L1	509282	510442	436	+	.	.
scaffold563	subtractBed	intrn	511110	511463	.	+	.	Parent=CGI_10019843;
	scaffold563	WUBlastX	LINE_L1	511110	511463	29	+	.	.
scaffold563	subtractBed	intrn	542523	542634	.	+	.	Parent=CGI_10019846;
	scaffold563	WUBlastX	LTR_Gypsy	542209	542634	54	-	.	.
scaffold563	subtractBed	intrn	558888	559034	.	+	.	Parent=CGI_10019846;
	scaffold563	WUBlastX	LINE_R2-Hero	558888	559034	45	-	.	.
scaffold563	subtractBed	intrn	558410	558874	.	+	.	Parent=CGI_10019846;
	scaffold563	WUBlastX	LINE_R2-Hero	558410	558874	337	-	.	.
scaffold563	subtractBed	intrn	565716	565893	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	565716	565893	83	+	.	.
scaffold563	subtractBed	intrn	566432	566649	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	566414	566649	363	+	.	.
scaffold563	subtractBed	intrn	566477	566605	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	566477	566605	75	+	.	.
scaffold563	subtractBed	intrn	578202	578899	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	578202	578899	988	+	.	.
scaffold563	subtractBed	intrn	582943	583100	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	582943	583100	298	+	.	.
scaffold563	subtractBed	intrn	587399	587447	.	+	.	Parent=CGI_10019846;
	scaffold563	TRF	Tandem_Repeat	587399	587447	62	+	.	.
scaffold563	subtractBed	intrn	595847	596133	.	-	.	Parent=CGI_10019847;
	scaffold563	TRF	Tandem_Repeat	595847	596133	412	+	.	.
scaffold564	subtractBed	intrn	83811	83848	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	83811	83848	58	+	.	.
scaffold564	subtractBed	intrn	85555	85650	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	85555	85650	174	+	.	.
scaffold564	subtractBed	intrn	86379	86438	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	86379	86438	84	+	.	.
scaffold564	subtractBed	intrn	86370	86438	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	86370	86438	93	+	.	.
scaffold564	subtractBed	intrn	87506	87537	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	87506	87537	64	+	.	.
scaffold564	subtractBed	intrn	93219	93277	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	93219	93277	118	+	.	.
scaffold564	subtractBed	intrn	94261	94524	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	94261	94524	433	+	.	.
scaffold564	subtractBed	intrn	96513	96799	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	96513	96799	288	+	.	.
scaffold564	subtractBed	intrn	96419	96730	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	96419	96730	256	+	.	.
scaffold564	subtractBed	intrn	103855	103900	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	103855	103900	92	+	.	.
scaffold564	subtractBed	intrn	103923	104046	.	+	.	Parent=CGI_10016127;
	scaffold564	TRF	Tandem_Repeat	103923	104046	59	+	.	.
scaffold564	subtractBed	intrn	109921	110124	.	+	.	Parent=CGI_10016128;
	scaffold564	TRF	Tandem_Repeat	109921	110124	236	+	.	.
scaffold564	subtractBed	intrn	110357	110496	.	+	.	Parent=CGI_10016128;
	scaffold564	TRF	Tandem_Repeat	110357	110496	113	+	.	.
scaffold564	subtractBed	intrn	244342	244391	.	+	.	Parent=CGI_10016135;
	scaffold564	TRF	Tandem_Repeat	244342	244391	100	+	.	.
scaffold564	subtractBed	intrn	245299	245340	.	+	.	Parent=CGI_10016135;
	scaffold564	TRF	Tandem_Repeat	245299	245340	84	+	.	.
scaffold564	subtractBed	intrn	264932	264968	.	+	.	Parent=CGI_10016138;
	scaffold564	TRF	Tandem_Repeat	264932	264968	56	+	.	.
scaffold564	subtractBed	intrn	280910	281305	.	+	.	Parent=CGI_10016138;
	scaffold564	TRF	Tandem_Repeat	280910	281305	464	+	.	.
scaffold564	subtractBed	intrn	264932	264968	.	-	.	Parent=CGI_10016139;
	scaffold564	TRF	Tandem_Repeat	264932	264968	56	+	.	.
scaffold564	subtractBed	intrn	288081	288166	.	-	.	Parent=CGI_10016140;
	scaffold564	TRF	Tandem_Repeat	288081	288166	100	+	.	.
scaffold564	subtractBed	intrn	297891	297936	.	+	.	Parent=CGI_10016141;
	scaffold564	TRF	Tandem_Repeat	297891	297936	92	+	.	.
scaffold564	subtractBed	intrn	336524	337070	.	-	.	Parent=CGI_10016146;
	scaffold564	TRF	Tandem_Repeat	336524	337070	532	+	.	.
scaffold564	subtractBed	intrn	336591	337070	.	-	.	Parent=CGI_10016146;
	scaffold564	TRF	Tandem_Repeat	336591	337070	521	+	.	.
scaffold564	subtractBed	intrn	337217	337790	.	-	.	Parent=CGI_10016146;
	scaffold564	TRF	Tandem_Repeat	337217	337790	815	+	.	.
scaffold564	subtractBed	intrn	337220	337790	.	-	.	Parent=CGI_10016146;
	scaffold564	TRF	Tandem_Repeat	337220	337790	831	+	.	.
scaffold564	subtractBed	intrn	349550	349630	.	-	.	Parent=CGI_10016146;
	scaffold564	TRF	Tandem_Repeat	349550	349647	142	+	.	.
scaffold564	subtractBed	intrn	365119	365920	.	+	.	Parent=CGI_10016147;
	scaffold564	TRF	Tandem_Repeat	365119	365920	845	+	.	.
scaffold564	subtractBed	intrn	365127	365920	.	+	.	Parent=CGI_10016147;
	scaffold564	TRF	Tandem_Repeat	365127	365920	874	+	.	.
scaffold564	subtractBed	intrn	366272	367239	.	+	.	Parent=CGI_10016147;
	scaffold564	TRF	Tandem_Repeat	366272	367239	1164	+	.	.
scaffold564	subtractBed	intrn	421542	421586	.	-	.	Parent=CGI_10016149;
	scaffold564	TRF	Tandem_Repeat	421542	421586	90	+	.	.
scaffold564	subtractBed	intrn	421806	421835	.	-	.	Parent=CGI_10016149;
	scaffold564	TRF	Tandem_Repeat	421806	421835	51	+	.	.
scaffold564	subtractBed	intrn	433266	433350	.	-	.	Parent=CGI_10016149;
	scaffold564	TRF	Tandem_Repeat	433266	433350	129	+	.	.
scaffold564	subtractBed	intrn	434818	434939	.	-	.	Parent=CGI_10016149;
	scaffold564	TRF	Tandem_Repeat	434818	434939	226	+	.	.
scaffold564	subtractBed	intrn	438585	438631	.	-	.	Parent=CGI_10016149;
	scaffold564	TRF	Tandem_Repeat	438585	438631	67	+	.	.
scaffold568	subtractBed	intrn	253407	253440	.	-	.	Parent=CGI_10012164;
	scaffold568	TRF	Tandem_Repeat	253407	253440	68	+	.	.
scaffold568	subtractBed	intrn	254994	255039	.	-	.	Parent=CGI_10012164;
	scaffold568	TRF	Tandem_Repeat	254994	255039	83	+	.	.
scaffold568	subtractBed	intrn	274862	274902	.	-	.	Parent=CGI_10012164;
	scaffold568	TRF	Tandem_Repeat	274862	274902	82	+	.	.
scaffold568	subtractBed	intrn	275307	275356	.	-	.	Parent=CGI_10012164;
	scaffold568	TRF	Tandem_Repeat	275307	275356	100	+	.	.
scaffold569	subtractBed	intrn	2051	2092	.	-	.	Parent=CGI_10009492;
	scaffold569	TRF	Tandem_Repeat	2051	2092	57	+	.	.
scaffold569	subtractBed	intrn	4606	4657	.	-	.	Parent=CGI_10009492;
	scaffold569	TRF	Tandem_Repeat	4606	4657	68	+	.	.
scaffold569	subtractBed	intrn	35491	35543	.	+	.	Parent=CGI_10009494;
	scaffold569	TRF	Tandem_Repeat	35491	35543	106	+	.	.
scaffold569	subtractBed	intrn	33436	33651	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LINE_CR1	33436	33651	76	+	.	.
scaffold569	subtractBed	intrn	43068	43364	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	43068	43364	49	+	.	.
scaffold569	subtractBed	intrn	40824	41111	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	40824	41111	107	+	.	.
scaffold569	subtractBed	intrn	40743	41144	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	40743	41144	99	+	.	.
scaffold569	subtractBed	intrn	42271	42369	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	42271	42369	24	+	.	.
scaffold569	subtractBed	intrn	43353	43535	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	43353	43535	46	+	.	.
scaffold569	subtractBed	intrn	40848	41591	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	40848	41591	99	+	.	.
scaffold569	subtractBed	intrn	41549	42334	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	41549	42334	205	+	.	.
scaffold569	subtractBed	intrn	43269	43505	.	+	.	Parent=CGI_10009494;
	scaffold569	WUBlastX	LTR_DIRS	43269	43505	50	+	.	.
scaffold569	subtractBed	intrn	56138	56193	.	+	.	Parent=CGI_10009494;
	scaffold569	TRF	Tandem_Repeat	56138	56193	89	+	.	.
scaffold569	subtractBed	intrn	59951	59990	.	+	.	Parent=CGI_10009494;
	scaffold569	TRF	Tandem_Repeat	59951	59990	62	+	.	.
scaffold569	subtractBed	intrn	102862	103681	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	102862	103681	1081	+	.	.
scaffold569	subtractBed	intrn	103901	103941	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	103901	103941	82	+	.	.
scaffold569	subtractBed	intrn	105220	105354	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	105220	105354	173	+	.	.
scaffold569	subtractBed	intrn	107069	107277	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	107069	107277	118	+	.	.
scaffold569	subtractBed	intrn	108916	109278	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	108916	109278	367	+	.	.
scaffold569	subtractBed	intrn	109070	109278	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	109070	109278	259	+	.	.
scaffold569	subtractBed	intrn	110463	111370	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	110463	111370	1378	+	.	.
scaffold569	subtractBed	intrn	111851	111899	.	-	.	Parent=CGI_10009496;
	scaffold569	TRF	Tandem_Repeat	111851	111899	89	+	.	.
scaffold569	subtractBed	intrn	113299	113475	.	-	.	Parent=CGI_10009496;
	scaffold569	WUBlastX	LINE_RTE-X	113299	113475	54	+	.	.
scaffold569	subtractBed	intrn	118607	118673	.	-	.	Parent=CGI_10009497;
	scaffold569	TRF	Tandem_Repeat	118607	118673	80	+	.	.
scaffold569	subtractBed	intrn	120353	120507	.	-	.	Parent=CGI_10009497;
	scaffold569	TRF	Tandem_Repeat	120353	120507	143	+	.	.
scaffold569	subtractBed	intrn	120371	120512	.	-	.	Parent=CGI_10009497;
	scaffold569	TRF	Tandem_Repeat	120371	120512	180	+	.	.
scaffold569	subtractBed	intrn	150994	151043	.	+	.	Parent=CGI_10009498;
	scaffold569	TRF	Tandem_Repeat	150994	151043	66	+	.	.
scaffold569	subtractBed	intrn	150994	151023	.	+	.	Parent=CGI_10009498;
	scaffold569	TRF	Tandem_Repeat	150994	151023	51	+	.	.
scaffold569	subtractBed	intrn	153163	153825	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_L2	153163	153825	149	-	.	.
scaffold569	subtractBed	intrn	153406	153948	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_Jockey	153406	153948	134	-	.	.
scaffold569	subtractBed	intrn	152800	153687	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_L2	152800	153687	442	-	.	.
scaffold569	subtractBed	intrn	157381	157414	.	+	.	Parent=CGI_10009498;
	scaffold569	TRF	Tandem_Repeat	157381	157414	68	+	.	.
scaffold569	subtractBed	intrn	162648	163427	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_L1-Tx1	162648	163427	173	-	.	.
scaffold569	subtractBed	intrn	163457	163630	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_L1-Tx1	163457	163630	87	-	.	.
scaffold569	subtractBed	intrn	163496	163693	.	+	.	Parent=CGI_10009498;
	scaffold569	WUBlastX	LINE_L1-Tx1	163496	163693	34	-	.	.
scaffold569	subtractBed	intrn	180547	180580	.	-	.	Parent=CGI_10009501;
	scaffold569	TRF	Tandem_Repeat	180547	180580	59	+	.	.
scaffold569	subtractBed	intrn	184175	184283	.	-	.	Parent=CGI_10009501;
	scaffold569	TRF	Tandem_Repeat	184175	184283	79	+	.	.
scaffold57	subtractBed	intrn	4656	4701	.	+	.	Parent=CGI_10020530;
	scaffold57	TRF	Tandem_Repeat	4656	4701	92	+	.	.
scaffold57	subtractBed	intrn	3861	4088	.	+	.	Parent=CGI_10020530;
	scaffold57	WUBlastX	DNA_En-Spm	3861	4088	68	+	.	.
scaffold57	subtractBed	intrn	4291	4383	.	+	.	Parent=CGI_10020530;
	scaffold57	WUBlastX	DNA_En-Spm	4291	4383	32	+	.	.
scaffold57	subtractBed	intrn	4389	5024	.	+	.	Parent=CGI_10020530;
	scaffold57	WUBlastX	DNA_En-Spm	4389	5024	58	+	.	.
scaffold57	subtractBed	intrn	3801	4085	.	+	.	Parent=CGI_10020530;
	scaffold57	WUBlastX	DNA_En-Spm	3801	4085	20	+	.	.
scaffold57	subtractBed	intrn	4371	4835	.	+	.	Parent=CGI_10020530;
	scaffold57	WUBlastX	DNA_En-Spm	4371	4835	130	+	.	.
scaffold57	subtractBed	intrn	68470	68499	.	+	.	Parent=CGI_10020537;
	scaffold57	TRF	Tandem_Repeat	68470	68499	60	+	.	.
scaffold57	subtractBed	intrn	74896	75382	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	74896	75382	218	+	.	.
scaffold57	subtractBed	intrn	75116	75584	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	75116	75584	406	+	.	.
scaffold57	subtractBed	intrn	74895	75584	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	74895	75584	465	+	.	.
scaffold57	subtractBed	intrn	75407	75584	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	75407	75584	223	+	.	.
scaffold57	subtractBed	intrn	78565	79160	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	78565	79160	721	+	.	.
scaffold57	subtractBed	intrn	78565	79335	.	-	.	Parent=CGI_10020538;
	scaffold57	TRF	Tandem_Repeat	78565	79335	735	+	.	.
scaffold57	subtractBed	intrn	110458	112068	.	+	.	Parent=CGI_10020539;
	scaffold57	TRF	Tandem_Repeat	110449	112068	2286	+	.	.
scaffold57	subtractBed	intrn	120987	121081	.	+	.	Parent=CGI_10020540;
	scaffold57	TRF	Tandem_Repeat	120987	121081	66	+	.	.
scaffold57	subtractBed	intrn	123098	123994	.	+	.	Parent=CGI_10020540;
	scaffold57	TRF	Tandem_Repeat	123098	123994	995	+	.	.
scaffold57	subtractBed	intrn	170271	170320	.	-	.	Parent=CGI_10020544;
	scaffold57	TRF	Tandem_Repeat	170271	170320	100	+	.	.
scaffold57	subtractBed	intrn	182026	182578	.	-	.	Parent=CGI_10020544;
	scaffold57	TRF	Tandem_Repeat	182026	182578	681	+	.	.
scaffold57	subtractBed	intrn	182026	182578	.	+	.	Parent=CGI_10020545;
	scaffold57	TRF	Tandem_Repeat	182026	182578	681	+	.	.
scaffold57	subtractBed	intrn	193093	193139	.	+	.	Parent=CGI_10020545;
	scaffold57	TRF	Tandem_Repeat	193093	193139	67	+	.	.
scaffold57	subtractBed	intrn	193093	193146	.	+	.	Parent=CGI_10020545;
	scaffold57	TRF	Tandem_Repeat	193093	193146	63	+	.	.
scaffold57	subtractBed	intrn	192277	192561	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	192277	192561	65	-	.	.
scaffold57	subtractBed	intrn	191992	192315	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	191992	192315	44	-	.	.
scaffold57	subtractBed	intrn	192124	192510	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	192124	192510	142	-	.	.
scaffold57	subtractBed	intrn	209591	210064	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	209591	210064	280	-	.	.
scaffold57	subtractBed	intrn	205773	206186	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	205773	206186	178	-	.	.
scaffold57	subtractBed	intrn	205860	206249	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	205860	206249	128	-	.	.
scaffold57	subtractBed	intrn	209555	210142	.	+	.	Parent=CGI_10020545;
	scaffold57	WUBlastX	LINE_RTE-X	209555	210142	166	-	.	.
scaffold57	subtractBed	intrn	247591	247966	.	-	.	Parent=CGI_10020547;
	scaffold57	TRF	Tandem_Repeat	247591	247966	626	+	.	.
scaffold57	subtractBed	intrn	254477	254532	.	-	.	Parent=CGI_10020548;
	scaffold57	TRF	Tandem_Repeat	254477	254532	103	+	.	.
scaffold57	subtractBed	intrn	258540	258577	.	-	.	Parent=CGI_10020548;
	scaffold57	TRF	Tandem_Repeat	258540	258577	69	+	.	.
scaffold57	subtractBed	intrn	270375	270404	.	-	.	Parent=CGI_10020548;
	scaffold57	TRF	Tandem_Repeat	270375	270404	51	+	.	.
scaffold57	subtractBed	intrn	280614	280673	.	-	.	Parent=CGI_10020548;
	scaffold57	TRF	Tandem_Repeat	280614	280673	120	+	.	.
scaffold57	subtractBed	intrn	280770	280799	.	-	.	Parent=CGI_10020548;
	scaffold57	TRF	Tandem_Repeat	280770	280799	60	+	.	.
scaffold57	subtractBed	intrn	290539	290626	.	-	.	Parent=CGI_10020549;
	scaffold57	TRF	Tandem_Repeat	290539	290626	160	+	.	.
scaffold57	subtractBed	intrn	291531	291536	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	291531	291824	150	-	.	.
scaffold57	subtractBed	intrn	291809	291908	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	291582	291908	120	-	.	.
scaffold57	subtractBed	intrn	292578	292579	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	292578	292751	98	-	.	.
scaffold57	subtractBed	intrn	291809	291824	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	291531	291824	150	-	.	.
scaffold57	subtractBed	intrn	292959	293018	.	-	.	Parent=CGI_10020549;
	scaffold57	TRF	Tandem_Repeat	292959	293018	111	+	.	.
scaffold57	subtractBed	intrn	293036	293036	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	293036	293167	68	-	.	.
scaffold57	subtractBed	intrn	292750	292799	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	292608	292799	104	-	.	.
scaffold57	subtractBed	intrn	292750	292751	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	292578	292751	98	-	.	.
scaffold57	subtractBed	intrn	293537	293580	.	-	.	Parent=CGI_10020549;
	scaffold57	WUBlastX	DNA_hAT	293537	293683	26	-	.	.
scaffold57	subtractBed	intrn	298672	298679	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	297789	298679	436	+	.	.
scaffold57	subtractBed	intrn	299462	299462	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	299319	299462	90	+	.	.
scaffold57	subtractBed	intrn	299872	299873	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	299872	300048	103	+	.	.
scaffold57	subtractBed	intrn	300076	300142	.	+	.	Parent=CGI_10020550;
	scaffold57	TRF	Tandem_Repeat	300076	300142	134	+	.	.
scaffold57	subtractBed	intrn	300174	300200	.	+	.	Parent=CGI_10020550;
	scaffold57	TRF	Tandem_Repeat	300174	300200	54	+	.	.
scaffold57	subtractBed	intrn	300044	300048	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	299872	300048	103	+	.	.
scaffold57	subtractBed	intrn	300410	300410	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	300410	300712	136	+	.	.
scaffold57	subtractBed	intrn	300683	300985	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	300416	301078	127	+	.	.
scaffold57	subtractBed	intrn	300683	300712	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	300410	300712	136	+	.	.
scaffold57	subtractBed	intrn	301078	301078	.	+	.	Parent=CGI_10020550;
	scaffold57	WUBlastX	DNA_hAT	300416	301078	127	+	.	.
scaffold57	subtractBed	intrn	329387	329718	.	-	.	Parent=CGI_10020551;
	scaffold57	TRF	Tandem_Repeat	329387	329718	587	+	.	.
scaffold57	subtractBed	intrn	331675	331711	.	-	.	Parent=CGI_10020551;
	scaffold57	TRF	Tandem_Repeat	331675	331711	74	+	.	.
scaffold57	subtractBed	intrn	375500	376145	.	+	.	Parent=CGI_10020552;
	scaffold57	TRF	Tandem_Repeat	375484	376145	718	+	.	.
scaffold57	subtractBed	intrn	377038	377103	.	+	.	Parent=CGI_10020552;
	scaffold57	TRF	Tandem_Repeat	377038	377103	107	+	.	.
scaffold57	subtractBed	intrn	377039	377100	.	+	.	Parent=CGI_10020552;
	scaffold57	TRF	Tandem_Repeat	377039	377100	81	+	.	.
scaffold57	subtractBed	intrn	379412	379807	.	+	.	Parent=CGI_10020552;
	scaffold57	WUBlastX	LINE_L2	379412	379807	48	-	.	.
scaffold57	subtractBed	intrn	378097	379374	.	+	.	Parent=CGI_10020552;
	scaffold57	WUBlastX	LINE_RTE-X	378097	379374	475	-	.	.
scaffold57	subtractBed	intrn	379406	379696	.	+	.	Parent=CGI_10020552;
	scaffold57	WUBlastX	LINE_RTE-X	379406	379696	221	-	.	.
scaffold57	subtractBed	intrn	379418	379747	.	+	.	Parent=CGI_10020552;
	scaffold57	WUBlastX	LINE_CR1	379418	379747	55	-	.	.
scaffold57	subtractBed	intrn	375500	376145	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	375484	376145	718	+	.	.
scaffold57	subtractBed	intrn	377038	377103	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	377038	377103	107	+	.	.
scaffold57	subtractBed	intrn	377039	377100	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	377039	377100	81	+	.	.
scaffold57	subtractBed	intrn	379412	379807	.	-	.	Parent=CGI_10020553;
	scaffold57	WUBlastX	LINE_L2	379412	379807	48	-	.	.
scaffold57	subtractBed	intrn	378097	379374	.	-	.	Parent=CGI_10020553;
	scaffold57	WUBlastX	LINE_RTE-X	378097	379374	475	-	.	.
scaffold57	subtractBed	intrn	379406	379696	.	-	.	Parent=CGI_10020553;
	scaffold57	WUBlastX	LINE_RTE-X	379406	379696	221	-	.	.
scaffold57	subtractBed	intrn	379418	379747	.	-	.	Parent=CGI_10020553;
	scaffold57	WUBlastX	LINE_CR1	379418	379747	55	-	.	.
scaffold57	subtractBed	intrn	383328	383657	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	383328	383657	412	+	.	.
scaffold57	subtractBed	intrn	384539	385379	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	384539	385379	441	+	.	.
scaffold57	subtractBed	intrn	384539	385378	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	384539	385378	667	+	.	.
scaffold57	subtractBed	intrn	384539	385383	.	-	.	Parent=CGI_10020553;
	scaffold57	TRF	Tandem_Repeat	384539	385383	698	+	.	.
scaffold57	subtractBed	intrn	422091	422226	.	-	.	Parent=CGI_10020557;
	scaffold57	TRF	Tandem_Repeat	422091	422226	154	+	.	.
scaffold57	subtractBed	intrn	422455	422496	.	-	.	Parent=CGI_10020557;
	scaffold57	TRF	Tandem_Repeat	422455	422496	84	+	.	.
scaffold57	subtractBed	intrn	423085	423122	.	-	.	Parent=CGI_10020557;
	scaffold57	TRF	Tandem_Repeat	423085	423122	76	+	.	.
scaffold57	subtractBed	intrn	423368	423443	.	-	.	Parent=CGI_10020557;
	scaffold57	TRF	Tandem_Repeat	423368	423443	93	+	.	.
scaffold57	subtractBed	intrn	445055	445121	.	+	.	Parent=CGI_10020561;
	scaffold57	TRF	Tandem_Repeat	445055	445121	134	+	.	.
scaffold57	subtractBed	intrn	446300	446407	.	+	.	Parent=CGI_10020561;
	scaffold57	WUBlastX	LINE_RTE-BovB	446300	446407	56	-	.	.
scaffold57	subtractBed	intrn	445811	445909	.	+	.	Parent=CGI_10020561;
	scaffold57	WUBlastX	LINE_RTE-BovB	445811	445909	45	-	.	.
scaffold57	subtractBed	intrn	446209	446307	.	+	.	Parent=CGI_10020561;
	scaffold57	WUBlastX	LINE_RTE-BovB	446209	446307	45	-	.	.
scaffold57	subtractBed	intrn	445899	446036	.	+	.	Parent=CGI_10020561;
	scaffold57	WUBlastX	LINE_RTE-BovB	445899	446036	47	-	.	.
scaffold57	subtractBed	intrn	445911	446015	.	+	.	Parent=CGI_10020561;
	scaffold57	WUBlastX	LINE_RTE-BovB	445911	446015	54	-	.	.
scaffold57	subtractBed	intrn	450682	450707	.	+	.	Parent=CGI_10020561;
	scaffold57	TRF	Tandem_Repeat	450682	450707	52	+	.	.
scaffold57	subtractBed	intrn	460392	460639	.	-	.	Parent=CGI_10020562;
	scaffold57	TRF	Tandem_Repeat	460392	460639	225	+	.	.
scaffold57	subtractBed	intrn	462168	462442	.	-	.	Parent=CGI_10020562;
	scaffold57	TRF	Tandem_Repeat	462168	462442	306	+	.	.
scaffold57	subtractBed	intrn	463299	463610	.	-	.	Parent=CGI_10020562;
	scaffold57	TRF	Tandem_Repeat	463299	463610	282	+	.	.
scaffold57	subtractBed	intrn	463303	463610	.	-	.	Parent=CGI_10020562;
	scaffold57	TRF	Tandem_Repeat	463303	463610	128	+	.	.
scaffold57	subtractBed	intrn	464522	464868	.	-	.	Parent=CGI_10020562;
	scaffold57	TRF	Tandem_Repeat	464522	464868	626	+	.	.
scaffold57	subtractBed	intrn	493522	493578	.	+	.	Parent=CGI_10020563;
	scaffold57	TRF	Tandem_Repeat	493522	493578	71	+	.	.
scaffold57	subtractBed	intrn	493521	493578	.	+	.	Parent=CGI_10020563;
	scaffold57	TRF	Tandem_Repeat	493521	493578	55	+	.	.
scaffold57	subtractBed	intrn	533396	533421	.	+	.	Parent=CGI_10020565;
	scaffold57	TRF	Tandem_Repeat	533396	533421	52	+	.	.
scaffold57	subtractBed	intrn	540021	540058	.	+	.	Parent=CGI_10020565;
	scaffold57	TRF	Tandem_Repeat	540021	540058	76	+	.	.
scaffold572	subtractBed	intrn	13730	13771	.	+	.	Parent=CGI_10001775;
	scaffold572	TRF	Tandem_Repeat	13730	13771	57	+	.	.
scaffold572	subtractBed	intrn	15519	16118	.	+	.	Parent=CGI_10001775;
	scaffold572	WUBlastX	LTR_Gypsy	15519	16118	56	-	.	.
scaffold572	subtractBed	intrn	16785	17587	.	+	.	Parent=CGI_10001775;
	scaffold572	TRF	Tandem_Repeat	16785	17587	779	+	.	.
scaffold572	subtractBed	intrn	16831	17587	.	+	.	Parent=CGI_10001775;
	scaffold572	TRF	Tandem_Repeat	16831	17587	1105	+	.	.
scaffold574	subtractBed	intrn	109012	109037	.	+	.	Parent=CGI_10008283;
	scaffold574	TRF	Tandem_Repeat	109012	109037	52	+	.	.
scaffold574	subtractBed	intrn	111654	111678	.	+	.	Parent=CGI_10008283;
	scaffold574	TRF	Tandem_Repeat	111654	111678	50	+	.	.
scaffold575	subtractBed	intrn	15487	15702	.	+	.	Parent=CGI_10006995;
	scaffold575	TRF	Tandem_Repeat	15487	15702	267	+	.	.
scaffold575	subtractBed	intrn	15678	15832	.	+	.	Parent=CGI_10006995;
	scaffold575	TRF	Tandem_Repeat	15678	15832	81	+	.	.
scaffold575	subtractBed	intrn	15487	15786	.	+	.	Parent=CGI_10006995;
	scaffold575	TRF	Tandem_Repeat	15487	15786	98	+	.	.
scaffold575	subtractBed	intrn	15888	16026	.	+	.	Parent=CGI_10006995;
	scaffold575	TRF	Tandem_Repeat	15888	16026	197	+	.	.
scaffold575	subtractBed	intrn	43420	43448	.	-	.	Parent=CGI_10006996;
	scaffold575	TRF	Tandem_Repeat	43420	43448	51	+	.	.
scaffold575	subtractBed	intrn	114263	114311	.	-	.	Parent=CGI_10006998;
	scaffold575	TRF	Tandem_Repeat	114263	114311	98	+	.	.
scaffold575	subtractBed	intrn	133482	133526	.	+	.	Parent=CGI_10007000;
	scaffold575	TRF	Tandem_Repeat	133482	133526	90	+	.	.
scaffold575	subtractBed	intrn	151729	151773	.	-	.	Parent=CGI_10007002;
	scaffold575	TRF	Tandem_Repeat	151729	151773	81	+	.	.
scaffold575	subtractBed	intrn	153831	153871	.	-	.	Parent=CGI_10007002;
	scaffold575	TRF	Tandem_Repeat	153831	153871	82	+	.	.
scaffold575	subtractBed	intrn	158866	158928	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	158866	158928	26	-	.	.
scaffold575	subtractBed	intrn	159430	159567	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	159430	159567	32	-	.	.
scaffold575	subtractBed	intrn	158464	158607	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	158464	158607	49	-	.	.
scaffold575	subtractBed	intrn	159123	159185	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	159123	159185	25	-	.	.
scaffold575	subtractBed	intrn	159108	159179	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	159108	159179	25	-	.	.
scaffold575	subtractBed	intrn	159454	159531	.	-	.	Parent=CGI_10007002;
	scaffold575	WUBlastX	DNA_Sola	159454	159531	41	-	.	.
scaffold576	subtractBed	intrn	9962	10008	.	-	.	Parent=CGI_10018748;
	scaffold576	TRF	Tandem_Repeat	9962	10008	94	+	.	.
scaffold576	subtractBed	intrn	15558	15654	.	-	.	Parent=CGI_10018749;
	scaffold576	TRF	Tandem_Repeat	15558	15654	133	+	.	.
scaffold576	subtractBed	intrn	55331	55377	.	+	.	Parent=CGI_10018752;
	scaffold576	TRF	Tandem_Repeat	55331	55377	94	+	.	.
scaffold576	subtractBed	intrn	69760	69788	.	-	.	Parent=CGI_10018753;
	scaffold576	TRF	Tandem_Repeat	69760	69788	58	+	.	.
scaffold576	subtractBed	intrn	75154	76020	.	-	.	Parent=CGI_10018753;
	scaffold576	TRF	Tandem_Repeat	75154	76020	1303	+	.	.
scaffold576	subtractBed	intrn	78574	78624	.	-	.	Parent=CGI_10018753;
	scaffold576	TRF	Tandem_Repeat	78574	78624	102	+	.	.
scaffold576	subtractBed	intrn	79771	79813	.	-	.	Parent=CGI_10018753;
	scaffold576	TRF	Tandem_Repeat	79771	79813	86	+	.	.
scaffold576	subtractBed	intrn	96176	96211	.	-	.	Parent=CGI_10018754;
	scaffold576	TRF	Tandem_Repeat	96176	96211	63	+	.	.
scaffold576	subtractBed	intrn	114797	114844	.	-	.	Parent=CGI_10018755;
	scaffold576	TRF	Tandem_Repeat	114797	114844	87	+	.	.
scaffold576	subtractBed	intrn	186332	186371	.	+	.	Parent=CGI_10018757;
	scaffold576	TRF	Tandem_Repeat	186332	186371	80	+	.	.
scaffold576	subtractBed	intrn	226724	226796	.	-	.	Parent=CGI_10018765;
	scaffold576	TRF	Tandem_Repeat	226724	226796	137	+	.	.
scaffold576	subtractBed	intrn	229698	229767	.	-	.	Parent=CGI_10018765;
	scaffold576	TRF	Tandem_Repeat	229698	229767	140	+	.	.
scaffold576	subtractBed	intrn	257123	257168	.	+	.	Parent=CGI_10018767;
	scaffold576	TRF	Tandem_Repeat	257123	257168	92	+	.	.
scaffold576	subtractBed	intrn	290991	291025	.	-	.	Parent=CGI_10018771;
	scaffold576	TRF	Tandem_Repeat	290991	291025	70	+	.	.
scaffold576	subtractBed	intrn	316984	317015	.	-	.	Parent=CGI_10018773;
	scaffold576	WUBlastX	DNA_hAT	316863	317015	43	-	.	.
scaffold576	subtractBed	intrn	317774	317816	.	-	.	Parent=CGI_10018773;
	scaffold576	WUBlastX	DNA_hAT	317774	317989	60	-	.	.
scaffold576	subtractBed	intrn	319105	319150	.	-	.	Parent=CGI_10018773;
	scaffold576	TRF	Tandem_Repeat	319105	319150	92	+	.	.
scaffold576	subtractBed	intrn	331505	332233	.	+	.	Parent=CGI_10018774;
	scaffold576	TRF	Tandem_Repeat	331505	332233	696	+	.	.
scaffold576	subtractBed	intrn	334229	334271	.	+	.	Parent=CGI_10018774;
	scaffold576	TRF	Tandem_Repeat	334229	334271	86	+	.	.
scaffold576	subtractBed	intrn	349288	349334	.	-	.	Parent=CGI_10018775;
	scaffold576	TRF	Tandem_Repeat	349288	349334	94	+	.	.
scaffold576	subtractBed	intrn	386636	386715	.	+	.	Parent=CGI_10018778;
	scaffold576	TRF	Tandem_Repeat	386636	386715	132	+	.	.
scaffold576	subtractBed	intrn	469109	469162	.	-	.	Parent=CGI_10018783;
	scaffold576	TRF	Tandem_Repeat	469109	469162	81	+	.	.
scaffold576	subtractBed	intrn	489508	489560	.	-	.	Parent=CGI_10018784;
	scaffold576	TRF	Tandem_Repeat	489508	489560	67	+	.	.
scaffold576	subtractBed	intrn	493629	493895	.	-	.	Parent=CGI_10018784;
	scaffold576	WUBlastX	DNA_Academ	493629	493895	62	-	.	.
scaffold576	subtractBed	intrn	493918	494013	.	-	.	Parent=CGI_10018784;
	scaffold576	WUBlastX	DNA_Academ	493918	494013	30	-	.	.
scaffold577	subtractBed	intrn	67268	67323	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	67268	67323	112	+	.	.
scaffold577	subtractBed	intrn	68488	68804	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	68488	68804	440	+	.	.
scaffold577	subtractBed	intrn	69196	69253	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	69196	69253	64	+	.	.
scaffold577	subtractBed	intrn	70807	70874	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	70807	70874	55	+	.	.
scaffold577	subtractBed	intrn	70822	70854	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	70822	70854	57	+	.	.
scaffold577	subtractBed	intrn	72052	72101	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	72052	72101	63	+	.	.
scaffold577	subtractBed	intrn	72045	72101	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	72045	72101	71	+	.	.
scaffold577	subtractBed	intrn	77248	77292	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	77248	77292	90	+	.	.
scaffold577	subtractBed	intrn	78616	78763	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	78616	78763	224	+	.	.
scaffold577	subtractBed	intrn	80921	81136	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	80921	81136	245	+	.	.
scaffold577	subtractBed	intrn	81734	81791	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	81734	81791	62	+	.	.
scaffold577	subtractBed	intrn	81737	81801	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	81737	81801	51	+	.	.
scaffold577	subtractBed	intrn	81987	82213	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	81987	82213	355	+	.	.
scaffold577	subtractBed	intrn	83980	84220	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	83980	84220	302	+	.	.
scaffold577	subtractBed	intrn	86560	86607	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	86560	86607	73	+	.	.
scaffold577	subtractBed	intrn	87549	87606	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	87549	87606	53	+	.	.
scaffold577	subtractBed	intrn	89783	89829	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	89783	89829	67	+	.	.
scaffold577	subtractBed	intrn	89845	89903	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	89845	89903	102	+	.	.
scaffold577	subtractBed	intrn	89875	90062	.	+	.	Parent=CGI_10009916;
	scaffold577	TRF	Tandem_Repeat	89875	90062	154	+	.	.
scaffold577	subtractBed	intrn	123464	123510	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	123464	123510	55	+	.	.
scaffold577	subtractBed	intrn	125461	125541	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	125461	125541	135	+	.	.
scaffold577	subtractBed	intrn	126235	126375	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	126235	126375	98	+	.	.
scaffold577	subtractBed	intrn	131392	131581	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	131392	131581	229	+	.	.
scaffold577	subtractBed	intrn	148512	148793	.	-	.	Parent=CGI_10009918;
	scaffold577	WUBlastX	DNA_hAT-Blackja	148512	148793	68	+	.	.
scaffold577	subtractBed	intrn	150467	150688	.	-	.	Parent=CGI_10009918;
	scaffold577	WUBlastX	DNA_hAT-Blackja	150467	150688	29	+	.	.
scaffold577	subtractBed	intrn	163048	163101	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	163048	163101	55	+	.	.
scaffold577	subtractBed	intrn	164019	164052	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	164019	164052	50	+	.	.
scaffold577	subtractBed	intrn	166254	166323	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	166254	166323	122	+	.	.
scaffold577	subtractBed	intrn	167796	167845	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	167796	167845	57	+	.	.
scaffold577	subtractBed	intrn	168681	168726	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	168681	168726	67	+	.	.
scaffold577	subtractBed	intrn	168678	168731	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	168678	168731	67	+	.	.
scaffold577	subtractBed	intrn	172528	172569	.	-	.	Parent=CGI_10009918;
	scaffold577	TRF	Tandem_Repeat	172528	172569	59	+	.	.
scaffold577	subtractBed	intrn	182196	182564	.	-	.	Parent=CGI_10009918;
	scaffold577	WUBlastX	DNA_Harbinger	182196	182564	383	+	.	.
scaffold577	subtractBed	intrn	182642	183133	.	-	.	Parent=CGI_10009918;
	scaffold577	WUBlastX	DNA_Harbinger	182642	183133	328	+	.	.
scaffold577	subtractBed	intrn	227024	227116	.	-	.	Parent=CGI_10009919;
	scaffold577	TRF	Tandem_Repeat	227024	227116	57	+	.	.
scaffold577	subtractBed	intrn	228337	228543	.	-	.	Parent=CGI_10009919;
	scaffold577	TRF	Tandem_Repeat	228337	228543	157	+	.	.
scaffold578	subtractBed	intrn	20492	20526	.	-	.	Parent=CGI_10015109;
	scaffold578	TRF	Tandem_Repeat	20492	20526	52	+	.	.
scaffold578	subtractBed	intrn	21942	22109	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	21942	22109	42	+	.	.
scaffold578	subtractBed	intrn	22242	22397	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	22242	22397	48	+	.	.
scaffold578	subtractBed	intrn	23013	23216	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	23013	23216	90	-	.	.
scaffold578	subtractBed	intrn	23359	23532	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	23359	23532	88	-	.	.
scaffold578	subtractBed	intrn	23898	23937	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	23698	23937	73	-	.	.
scaffold578	subtractBed	intrn	24000	24001	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	24000	24188	78	-	.	.
scaffold578	subtractBed	intrn	23961	24001	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	23961	24203	51	-	.	.
scaffold578	subtractBed	intrn	24186	24188	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	24000	24188	78	-	.	.
scaffold578	subtractBed	intrn	24329	24862	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	24329	24862	210	-	.	.
scaffold578	subtractBed	intrn	24186	24203	.	-	.	Parent=CGI_10015109;
	scaffold578	WUBlastX	DNA_Kolobok	23961	24203	51	-	.	.
scaffold578	subtractBed	intrn	94407	94446	.	+	.	Parent=CGI_10015112;
	scaffold578	TRF	Tandem_Repeat	94407	94446	59	+	.	.
scaffold578	subtractBed	intrn	103337	103361	.	+	.	Parent=CGI_10015112;
	scaffold578	TRF	Tandem_Repeat	103337	103361	50	+	.	.
scaffold578	subtractBed	intrn	109173	109234	.	+	.	Parent=CGI_10015112;
	scaffold578	TRF	Tandem_Repeat	109173	109234	115	+	.	.
scaffold578	subtractBed	intrn	154967	155029	.	-	.	Parent=CGI_10015115;
	scaffold578	TRF	Tandem_Repeat	154967	155029	126	+	.	.
scaffold578	subtractBed	intrn	164664	164761	.	-	.	Parent=CGI_10015115;
	scaffold578	TRF	Tandem_Repeat	164664	164761	67	+	.	.
scaffold578	subtractBed	intrn	164721	164764	.	-	.	Parent=CGI_10015115;
	scaffold578	TRF	Tandem_Repeat	164721	164764	52	+	.	.
scaffold578	subtractBed	intrn	164664	164761	.	+	.	Parent=CGI_10015116;
	scaffold578	TRF	Tandem_Repeat	164664	164761	67	+	.	.
scaffold578	subtractBed	intrn	164721	164764	.	+	.	Parent=CGI_10015116;
	scaffold578	TRF	Tandem_Repeat	164721	164764	52	+	.	.
scaffold578	subtractBed	intrn	168469	168499	.	+	.	Parent=CGI_10015116;
	scaffold578	TRF	Tandem_Repeat	168469	168499	62	+	.	.
scaffold578	subtractBed	intrn	235153	235729	.	-	.	Parent=CGI_10015122;
	scaffold578	TRF	Tandem_Repeat	235153	235729	766	+	.	.
scaffold578	subtractBed	intrn	278691	278875	.	-	.	Parent=CGI_10015124;
	scaffold578	TRF	Tandem_Repeat	278691	278875	194	+	.	.
scaffold578	subtractBed	intrn	292941	293107	.	-	.	Parent=CGI_10015124;
	scaffold578	TRF	Tandem_Repeat	292941	293107	253	+	.	.
scaffold578	subtractBed	intrn	309617	309659	.	-	.	Parent=CGI_10015126;
	scaffold578	TRF	Tandem_Repeat	309617	309659	86	+	.	.
scaffold578	subtractBed	intrn	309617	309659	.	+	.	Parent=CGI_10015127;
	scaffold578	TRF	Tandem_Repeat	309617	309659	86	+	.	.
scaffold578	subtractBed	intrn	340163	340585	.	-	.	Parent=CGI_10015129;
	scaffold578	WUBlastX	DNA_TcMar-Tc1	340163	340585	111	+	.	.
scaffold578	subtractBed	intrn	340464	341045	.	-	.	Parent=CGI_10015129;
	scaffold578	WUBlastX	DNA_TcMar-Tc1	340464	341045	248	+	.	.
scaffold578	subtractBed	intrn	340584	341171	.	-	.	Parent=CGI_10015129;
	scaffold578	WUBlastX	DNA_TcMar-Tc1	340584	341171	264	+	.	.
scaffold578	subtractBed	intrn	349831	350235	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	349831	350235	134	+	.	.
scaffold578	subtractBed	intrn	357358	357411	.	+	.	Parent=CGI_10015130;
	scaffold578	TRF	Tandem_Repeat	357358	357411	90	+	.	.
scaffold578	subtractBed	intrn	356363	356590	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	356363	356590	25	+	.	.
scaffold578	subtractBed	intrn	357035	357307	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	357035	357307	146	+	.	.
scaffold578	subtractBed	intrn	358034	358834	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LTR_DIRS	358034	358834	296	-	.	.
scaffold578	subtractBed	intrn	357002	357340	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	357002	357340	130	+	.	.
scaffold578	subtractBed	intrn	355807	356352	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	355807	356352	24	+	.	.
scaffold578	subtractBed	intrn	357827	358039	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	357827	358039	90	+	.	.
scaffold578	subtractBed	intrn	356348	356506	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	356348	356506	49	+	.	.
scaffold578	subtractBed	intrn	355857	355988	.	+	.	Parent=CGI_10015130;
	scaffold578	WUBlastX	LINE_RTE-X	355857	355988	54	+	.	.
scaffold578	subtractBed	intrn	369873	369898	.	-	.	Parent=CGI_10015132;
	scaffold578	TRF	Tandem_Repeat	369873	369898	52	+	.	.
scaffold579	subtractBed	intrn	4156	4224	.	+	.	Parent=CGI_10011255;
	scaffold579	TRF	Tandem_Repeat	4156	4224	138	+	.	.
scaffold579	subtractBed	intrn	6477	6614	.	+	.	Parent=CGI_10011255;
	scaffold579	TRF	Tandem_Repeat	6477	6614	188	+	.	.
scaffold579	subtractBed	intrn	12437	12466	.	+	.	Parent=CGI_10011255;
	scaffold579	TRF	Tandem_Repeat	12437	12466	60	+	.	.
scaffold579	subtractBed	intrn	14094	14145	.	+	.	Parent=CGI_10011255;
	scaffold579	TRF	Tandem_Repeat	14094	14145	104	+	.	.
scaffold579	subtractBed	intrn	32853	33087	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	32853	33087	416	+	.	.
scaffold579	subtractBed	intrn	33265	33434	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	33265	33434	295	+	.	.
scaffold579	subtractBed	intrn	46252	46289	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	46252	46289	76	+	.	.
scaffold579	subtractBed	intrn	46360	46403	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	46360	46403	88	+	.	.
scaffold579	subtractBed	intrn	47869	48309	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	47869	48309	864	+	.	.
scaffold579	subtractBed	intrn	48283	48488	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	48283	48488	367	+	.	.
scaffold579	subtractBed	intrn	50460	50529	.	-	.	Parent=CGI_10011256;
	scaffold579	TRF	Tandem_Repeat	50460	50529	122	+	.	.
scaffold579	subtractBed	intrn	54108	54382	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	54108	54382	191	+	.	.
scaffold579	subtractBed	intrn	54110	54366	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	54110	54366	171	+	.	.
scaffold579	subtractBed	intrn	54108	54360	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	54108	54360	240	+	.	.
scaffold579	subtractBed	intrn	57197	57310	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	57197	57310	72	+	.	.
scaffold579	subtractBed	intrn	57419	57466	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	57419	57466	52	+	.	.
scaffold579	subtractBed	intrn	59893	59964	.	-	.	Parent=CGI_10011257;
	scaffold579	TRF	Tandem_Repeat	59893	59964	67	+	.	.
scaffold579	subtractBed	intrn	76520	77752	.	-	.	Parent=CGI_10011260;
	scaffold579	WUBlastX	DNA_MuDR	76520	77752	125	-	.	.
scaffold579	subtractBed	intrn	100675	100830	.	-	.	Parent=CGI_10011261;
	scaffold579	TRF	Tandem_Repeat	100675	100830	127	+	.	.
scaffold579	subtractBed	intrn	189547	189738	.	-	.	Parent=CGI_10011262;
	scaffold579	TRF	Tandem_Repeat	189547	189738	275	+	.	.
scaffold579	subtractBed	intrn	194136	194186	.	+	.	Parent=CGI_10011264;
	scaffold579	TRF	Tandem_Repeat	194136	194186	95	+	.	.
scaffold579	subtractBed	intrn	206964	207149	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	206964	207149	36	+	.	.
scaffold579	subtractBed	intrn	205917	206075	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	205917	206075	31	+	.	.
scaffold579	subtractBed	intrn	207241	207567	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	207241	207567	52	+	.	.
scaffold579	subtractBed	intrn	207241	207477	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	207241	207477	87	+	.	.
scaffold579	subtractBed	intrn	206870	206935	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	206870	206935	33	+	.	.
scaffold579	subtractBed	intrn	207172	207456	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	DNA_TcMar-Tc1	207172	207456	67	+	.	.
scaffold579	subtractBed	intrn	214197	215270	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	214197	215270	164	+	.	.
scaffold579	subtractBed	intrn	215621	215674	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	215621	215674	43	+	.	.
scaffold579	subtractBed	intrn	215252	215758	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	215252	215758	28	+	.	.
scaffold579	subtractBed	intrn	213878	214195	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	213878	214195	44	+	.	.
scaffold579	subtractBed	intrn	214779	215618	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	214779	215618	346	+	.	.
scaffold579	subtractBed	intrn	213821	214180	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	213821	214180	38	+	.	.
scaffold579	subtractBed	intrn	213929	214195	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LTR_Pao	213929	214195	109	+	.	.
scaffold579	subtractBed	intrn	217827	217883	.	+	.	Parent=CGI_10011264;
	scaffold579	TRF	Tandem_Repeat	217827	217883	57	+	.	.
scaffold579	subtractBed	intrn	216789	217115	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LINE_Penelope	216789	217115	29	-	.	.
scaffold579	subtractBed	intrn	216759	217058	.	+	.	Parent=CGI_10011264;
	scaffold579	WUBlastX	LINE_Penelope	216759	217058	155	-	.	.
scaffold579	subtractBed	intrn	261068	261097	.	-	.	Parent=CGI_10011267;
	scaffold579	TRF	Tandem_Repeat	261068	261097	60	+	.	.
scaffold579	subtractBed	intrn	264650	264675	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	264650	264675	52	+	.	.
scaffold579	subtractBed	intrn	269711	269740	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	269711	269740	60	+	.	.
scaffold579	subtractBed	intrn	267248	267583	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	267248	267583	26	+	.	.
scaffold579	subtractBed	intrn	267251	267442	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	267251	267442	93	+	.	.
scaffold579	subtractBed	intrn	268333	268611	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	268333	268611	202	+	.	.
scaffold579	subtractBed	intrn	268604	269386	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	268604	269386	186	+	.	.
scaffold579	subtractBed	intrn	268182	268334	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	268182	268334	131	+	.	.
scaffold579	subtractBed	intrn	268089	268334	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	268089	268334	74	+	.	.
scaffold579	subtractBed	intrn	267245	267526	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	267245	267526	83	+	.	.
scaffold579	subtractBed	intrn	267213	267287	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	267213	267287	28	+	.	.
scaffold579	subtractBed	intrn	267281	267442	.	+	.	Parent=CGI_10011268;
	scaffold579	WUBlastX	LINE_RTE-BovB	267281	267442	95	+	.	.
scaffold579	subtractBed	intrn	275341	275391	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	275341	275391	93	+	.	.
scaffold579	subtractBed	intrn	277878	277944	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	277878	277944	55	+	.	.
scaffold579	subtractBed	intrn	278573	278618	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	278573	278618	74	+	.	.
scaffold579	subtractBed	intrn	280185	280215	.	+	.	Parent=CGI_10011268;
	scaffold579	TRF	Tandem_Repeat	280185	280215	53	+	.	.
scaffold58	subtractBed	intrn	29017	29055	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	29017	29055	78	+	.	.
scaffold58	subtractBed	intrn	29577	29630	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	29577	29630	108	+	.	.
scaffold58	subtractBed	intrn	29917	29946	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	29917	29946	60	+	.	.
scaffold58	subtractBed	intrn	31067	31948	.	-	.	Parent=CGI_10023129;
	scaffold58	WUBlastX	LINE_L2	31067	31948	332	+	.	.
scaffold58	subtractBed	intrn	33958	33992	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	33958	33992	52	+	.	.
scaffold58	subtractBed	intrn	34466	34528	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	34466	34528	117	+	.	.
scaffold58	subtractBed	intrn	35285	35329	.	-	.	Parent=CGI_10023129;
	scaffold58	TRF	Tandem_Repeat	35285	35329	90	+	.	.
scaffold58	subtractBed	intrn	52358	52435	.	-	.	Parent=CGI_10023130;
	scaffold58	TRF	Tandem_Repeat	52358	52435	140	+	.	.
scaffold58	subtractBed	intrn	162287	162326	.	+	.	Parent=CGI_10023136;
	scaffold58	TRF	Tandem_Repeat	162287	162326	80	+	.	.
scaffold58	subtractBed	intrn	293190	293508	.	-	.	Parent=CGI_10023139;
	scaffold58	TRF	Tandem_Repeat	293190	293508	329	+	.	.
scaffold58	subtractBed	intrn	296545	296589	.	-	.	Parent=CGI_10023139;
	scaffold58	TRF	Tandem_Repeat	296545	296589	63	+	.	.
scaffold58	subtractBed	intrn	301836	301872	.	-	.	Parent=CGI_10023139;
	scaffold58	TRF	Tandem_Repeat	301836	301872	65	+	.	.
scaffold58	subtractBed	intrn	302436	302579	.	-	.	Parent=CGI_10023139;
	scaffold58	TRF	Tandem_Repeat	302436	302579	209	+	.	.
scaffold58	subtractBed	intrn	302928	303016	.	-	.	Parent=CGI_10023139;
	scaffold58	TRF	Tandem_Repeat	302928	303016	81	+	.	.
scaffold58	subtractBed	intrn	318627	318746	.	-	.	Parent=CGI_10023141;
	scaffold58	TRF	Tandem_Repeat	318627	318746	231	+	.	.
scaffold58	subtractBed	intrn	341643	341727	.	-	.	Parent=CGI_10023142;
	scaffold58	TRF	Tandem_Repeat	341643	341727	143	+	.	.
scaffold58	subtractBed	intrn	341649	341736	.	-	.	Parent=CGI_10023142;
	scaffold58	TRF	Tandem_Repeat	341649	341736	86	+	.	.
scaffold58	subtractBed	intrn	346190	346367	.	-	.	Parent=CGI_10023142;
	scaffold58	TRF	Tandem_Repeat	346190	346367	320	+	.	.
scaffold58	subtractBed	intrn	347178	347240	.	-	.	Parent=CGI_10023142;
	scaffold58	TRF	Tandem_Repeat	347178	347240	126	+	.	.
scaffold58	subtractBed	intrn	350169	350224	.	-	.	Parent=CGI_10023142;
	scaffold58	TRF	Tandem_Repeat	350169	350224	105	+	.	.
scaffold58	subtractBed	intrn	396268	396789	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	396268	396789	174	+	.	.
scaffold58	subtractBed	intrn	396918	397139	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	396918	397139	139	-	.	.
scaffold58	subtractBed	intrn	397357	398028	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	397357	398028	395	-	.	.
scaffold58	subtractBed	intrn	398295	398429	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	398295	398429	45	-	.	.
scaffold58	subtractBed	intrn	398241	398468	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_Kolobok-IS4	398241	398468	27	-	.	.
scaffold58	subtractBed	intrn	395853	396140	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	395853	396140	42	+	.	.
scaffold58	subtractBed	intrn	399112	399114	.	-	.	Parent=CGI_10023143;
	scaffold58	WUBlastX	DNA_IS4EU	399112	399423	51	-	.	.
scaffold58	subtractBed	intrn	457890	458074	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	457890	458074	193	+	.	.
scaffold58	subtractBed	intrn	457890	458074	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	457890	458074	273	+	.	.
scaffold58	subtractBed	intrn	461639	461708	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	461639	461708	70	+	.	.
scaffold58	subtractBed	intrn	462225	462267	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	462225	462267	86	+	.	.
scaffold58	subtractBed	intrn	460125	460685	.	-	.	Parent=CGI_10023145;
	scaffold58	WUBlastX	DNA_Crypton	460125	460685	98	-	.	.
scaffold58	subtractBed	intrn	460840	461019	.	-	.	Parent=CGI_10023145;
	scaffold58	WUBlastX	DNA_Crypton	460840	461019	78	-	.	.
scaffold58	subtractBed	intrn	460882	461451	.	-	.	Parent=CGI_10023145;
	scaffold58	WUBlastX	DNA_Crypton	460882	461451	251	-	.	.
scaffold58	subtractBed	intrn	466355	466404	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	466355	466404	100	+	.	.
scaffold58	subtractBed	intrn	467450	467495	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	467450	467495	58	+	.	.
scaffold58	subtractBed	intrn	468648	468694	.	-	.	Parent=CGI_10023145;
	scaffold58	TRF	Tandem_Repeat	468648	468694	94	+	.	.
scaffold58	subtractBed	intrn	508763	508881	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	508763	508881	75	+	.	.
scaffold58	subtractBed	intrn	513293	513707	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	513293	513707	310	+	.	.
scaffold58	subtractBed	intrn	513470	513713	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	513470	513713	260	+	.	.
scaffold58	subtractBed	intrn	513737	513773	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	513737	513773	74	+	.	.
scaffold58	subtractBed	intrn	514832	515127	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	514832	515127	269	+	.	.
scaffold58	subtractBed	intrn	514832	515127	.	+	.	Parent=CGI_10023147;
	scaffold58	TRF	Tandem_Repeat	514832	515127	336	+	.	.
scaffold58	subtractBed	intrn	520562	520797	.	-	.	Parent=CGI_10023148;
	scaffold58	TRF	Tandem_Repeat	520562	520837	353	+	.	.
scaffold58	subtractBed	intrn	519936	520130	.	-	.	Parent=CGI_10023148;
	scaffold58	WUBlastX	DNA_hAT-Blackja	519936	520130	58	-	.	.
scaffold58	subtractBed	intrn	551836	551836	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_Sola	551836	552198	55	+	.	.
scaffold58	subtractBed	intrn	552096	552198	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_Sola	551836	552198	55	+	.	.
scaffold58	subtractBed	intrn	553024	553050	.	+	.	Parent=CGI_10023151;
	scaffold58	TRF	Tandem_Repeat	553024	553050	54	+	.	.
scaffold58	subtractBed	intrn	558416	559314	.	+	.	Parent=CGI_10023151;
	scaffold58	TRF	Tandem_Repeat	558416	559314	1467	+	.	.
scaffold58	subtractBed	intrn	564756	564896	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_TcMar-Marin	564756	564896	78	-	.	.
scaffold58	subtractBed	intrn	564723	564866	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_TcMar-Marin	564723	564866	76	-	.	.
scaffold58	subtractBed	intrn	564678	564866	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_TcMar-Marin	564678	564866	64	-	.	.
scaffold58	subtractBed	intrn	564768	564881	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_TcMar-Marin	564768	564881	83	-	.	.
scaffold58	subtractBed	intrn	564765	565154	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	DNA_TcMar-Marin	564765	565154	37	-	.	.
scaffold58	subtractBed	intrn	570806	571636	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	570806	571636	58	-	.	.
scaffold58	subtractBed	intrn	571010	571918	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	571010	571918	57	-	.	.
scaffold58	subtractBed	intrn	566947	567576	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy-Cigr	566947	567576	108	-	.	.
scaffold58	subtractBed	intrn	568350	570650	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	568350	570650	1349	-	.	.
scaffold58	subtractBed	intrn	567671	568333	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	567671	568333	69	-	.	.
scaffold58	subtractBed	intrn	571115	571660	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	571115	571660	161	-	.	.
scaffold58	subtractBed	intrn	570333	570746	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy	570333	570746	35	-	.	.
scaffold58	subtractBed	intrn	567173	568219	.	+	.	Parent=CGI_10023151;
	scaffold58	WUBlastX	LTR_Gypsy-Cigr	567173	568219	286	-	.	.
scaffold58	subtractBed	intrn	570806	571636	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	570806	571636	58	-	.	.
scaffold58	subtractBed	intrn	571010	571918	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	571010	571918	57	-	.	.
scaffold58	subtractBed	intrn	566947	567576	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy-Cigr	566947	567576	108	-	.	.
scaffold58	subtractBed	intrn	568350	570650	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	568350	570650	1349	-	.	.
scaffold58	subtractBed	intrn	567671	568333	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	567671	568333	69	-	.	.
scaffold58	subtractBed	intrn	571115	571660	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	571115	571660	161	-	.	.
scaffold58	subtractBed	intrn	570333	570746	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy	570333	570746	35	-	.	.
scaffold58	subtractBed	intrn	567173	568219	.	-	.	Parent=CGI_10023152;
	scaffold58	WUBlastX	LTR_Gypsy-Cigr	567173	568219	286	-	.	.
scaffold58	subtractBed	intrn	573930	573988	.	-	.	Parent=CGI_10023153;
	scaffold58	TRF	Tandem_Repeat	573930	573988	109	+	.	.
scaffold58	subtractBed	intrn	586208	586296	.	-	.	Parent=CGI_10023154;
	scaffold58	TRF	Tandem_Repeat	586208	586296	142	+	.	.
scaffold58	subtractBed	intrn	586208	586296	.	-	.	Parent=CGI_10023154;
	scaffold58	TRF	Tandem_Repeat	586208	586296	141	+	.	.
scaffold58	subtractBed	intrn	625322	625393	.	-	.	Parent=CGI_10023157;
	scaffold58	TRF	Tandem_Repeat	625322	625393	90	+	.	.
scaffold58	subtractBed	intrn	625339	625390	.	-	.	Parent=CGI_10023157;
	scaffold58	TRF	Tandem_Repeat	625339	625390	77	+	.	.
scaffold58	subtractBed	intrn	652728	653068	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	652728	653068	333	+	.	.
scaffold58	subtractBed	intrn	652728	653068	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	652728	653068	364	+	.	.
scaffold58	subtractBed	intrn	653078	653600	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	653078	653600	514	+	.	.
scaffold58	subtractBed	intrn	653078	653600	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	653078	653600	505	+	.	.
scaffold58	subtractBed	intrn	653078	653600	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	653078	653600	534	+	.	.
scaffold58	subtractBed	intrn	655790	655839	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	655790	655839	100	+	.	.
scaffold58	subtractBed	intrn	656882	657103	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	656882	657103	232	+	.	.
scaffold58	subtractBed	intrn	656861	657282	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	656861	657282	400	+	.	.
scaffold58	subtractBed	intrn	657708	657957	.	-	.	Parent=CGI_10023158;
	scaffold58	TRF	Tandem_Repeat	657708	657957	198	+	.	.
scaffold58	subtractBed	intrn	672649	672827	.	-	.	Parent=CGI_10023159;
	scaffold58	TRF	Tandem_Repeat	672649	672827	216	+	.	.
scaffold58	subtractBed	intrn	672670	672827	.	-	.	Parent=CGI_10023159;
	scaffold58	TRF	Tandem_Repeat	672670	672827	208	+	.	.
scaffold58	subtractBed	intrn	691988	692732	.	-	.	Parent=CGI_10023160;
	scaffold58	TRF	Tandem_Repeat	691988	692732	971	+	.	.
scaffold58	subtractBed	intrn	697562	698236	.	-	.	Parent=CGI_10023160;
	scaffold58	TRF	Tandem_Repeat	697562	698244	1168	+	.	.
scaffold58	subtractBed	intrn	698510	698773	.	-	.	Parent=CGI_10023160;
	scaffold58	TRF	Tandem_Repeat	698510	698773	259	+	.	.
scaffold58	subtractBed	intrn	738678	738800	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1	738678	738800	34	+	.	.
scaffold58	subtractBed	intrn	738720	738788	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1	738720	738788	38	+	.	.
scaffold58	subtractBed	intrn	738475	738615	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1-Tx1	738475	738615	69	+	.	.
scaffold58	subtractBed	intrn	738630	738845	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1-Tx1	738630	738845	31	+	.	.
scaffold58	subtractBed	intrn	738782	738991	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1-Tx1	738782	738991	22	+	.	.
scaffold58	subtractBed	intrn	738412	738615	.	+	.	Parent=CGI_10023162;
	scaffold58	WUBlastX	LINE_L1-Tx1	738412	738615	31	+	.	.
scaffold58	subtractBed	intrn	749690	749770	.	+	.	Parent=CGI_10023162;
	scaffold58	TRF	Tandem_Repeat	749690	749770	153	+	.	.
scaffold58	subtractBed	intrn	755816	757799	.	+	.	Parent=CGI_10023163;
	scaffold58	TRF	Tandem_Repeat	755816	757799	1869	+	.	.
scaffold58	subtractBed	intrn	755800	757799	.	+	.	Parent=CGI_10023163;
	scaffold58	TRF	Tandem_Repeat	755800	757799	1794	+	.	.
scaffold58	subtractBed	intrn	758641	758693	.	+	.	Parent=CGI_10023163;
	scaffold58	TRF	Tandem_Repeat	758641	758693	97	+	.	.
scaffold58	subtractBed	intrn	763665	763745	.	+	.	Parent=CGI_10023163;
	scaffold58	TRF	Tandem_Repeat	763665	763745	162	+	.	.
scaffold58	subtractBed	intrn	764852	764897	.	+	.	Parent=CGI_10023163;
	scaffold58	TRF	Tandem_Repeat	764852	764897	85	+	.	.
scaffold58	subtractBed	intrn	772887	773156	.	+	.	Parent=CGI_10023163;
	scaffold58	WUBlastX	LINE_L2	772887	773156	62	+	.	.
scaffold58	subtractBed	intrn	778454	778639	.	-	.	Parent=CGI_10023164;
	scaffold58	WUBlastX	DNA_P	778454	778639	23	+	.	.
scaffold58	subtractBed	intrn	784855	784916	.	+	.	Parent=CGI_10023165;
	scaffold58	TRF	Tandem_Repeat	784855	784916	70	+	.	.
scaffold58	subtractBed	intrn	789088	789750	.	+	.	Parent=CGI_10023166;
	scaffold58	TRF	Tandem_Repeat	789088	789750	1128	+	.	.
scaffold58	subtractBed	intrn	789757	789791	.	+	.	Parent=CGI_10023166;
	scaffold58	TRF	Tandem_Repeat	789757	789791	52	+	.	.
scaffold58	subtractBed	intrn	794204	794950	.	+	.	Parent=CGI_10023166;
	scaffold58	TRF	Tandem_Repeat	794204	794950	961	+	.	.
scaffold58	subtractBed	intrn	795744	795803	.	+	.	Parent=CGI_10023166;
	scaffold58	TRF	Tandem_Repeat	795744	795803	113	+	.	.
scaffold58	subtractBed	intrn	801121	801267	.	+	.	Parent=CGI_10023166;
	scaffold58	TRF	Tandem_Repeat	801121	801267	258	+	.	.
scaffold58	subtractBed	intrn	795744	795803	.	-	.	Parent=CGI_10023167;
	scaffold58	TRF	Tandem_Repeat	795744	795803	113	+	.	.
scaffold58	subtractBed	intrn	801121	801267	.	-	.	Parent=CGI_10023167;
	scaffold58	TRF	Tandem_Repeat	801121	801267	258	+	.	.
scaffold580	subtractBed	intrn	58959	59010	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	58959	59010	95	+	.	.
scaffold580	subtractBed	intrn	65233	65275	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	65233	65275	50	+	.	.
scaffold580	subtractBed	intrn	69221	69276	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	69221	69276	76	+	.	.
scaffold580	subtractBed	intrn	69224	69276	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	69224	69276	88	+	.	.
scaffold580	subtractBed	intrn	70401	70452	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	70401	70452	104	+	.	.
scaffold580	subtractBed	intrn	77394	77455	.	-	.	Parent=CGI_10020485;
	scaffold580	TRF	Tandem_Repeat	77394	77455	115	+	.	.
scaffold580	subtractBed	intrn	85963	85999	.	-	.	Parent=CGI_10020487;
	scaffold580	TRF	Tandem_Repeat	85963	85999	74	+	.	.
scaffold580	subtractBed	intrn	244110	244153	.	+	.	Parent=CGI_10020492;
	scaffold580	TRF	Tandem_Repeat	244110	244153	79	+	.	.
scaffold580	subtractBed	intrn	290946	291149	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	290946	291149	273	+	.	.
scaffold580	subtractBed	intrn	292660	292780	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	292660	292780	107	+	.	.
scaffold580	subtractBed	intrn	292724	293220	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	292724	293220	363	+	.	.
scaffold580	subtractBed	intrn	292724	293194	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	292724	293194	371	+	.	.
scaffold580	subtractBed	intrn	299301	299355	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	299301	299355	110	+	.	.
scaffold580	subtractBed	intrn	301788	301816	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	301788	301816	58	+	.	.
scaffold580	subtractBed	intrn	313611	314613	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	313611	314613	1375	+	.	.
scaffold580	subtractBed	intrn	314784	314822	.	+	.	Parent=CGI_10020496;
	scaffold580	TRF	Tandem_Repeat	314784	314822	60	+	.	.
scaffold580	subtractBed	intrn	290946	291149	.	-	.	Parent=CGI_10020497;
	scaffold580	TRF	Tandem_Repeat	290946	291149	273	+	.	.
scaffold580	subtractBed	intrn	292660	292780	.	-	.	Parent=CGI_10020497;
	scaffold580	TRF	Tandem_Repeat	292660	292780	107	+	.	.
scaffold580	subtractBed	intrn	292724	293220	.	-	.	Parent=CGI_10020497;
	scaffold580	TRF	Tandem_Repeat	292724	293220	363	+	.	.
scaffold580	subtractBed	intrn	292724	293194	.	-	.	Parent=CGI_10020497;
	scaffold580	TRF	Tandem_Repeat	292724	293194	371	+	.	.
scaffold580	subtractBed	intrn	319615	319661	.	+	.	Parent=CGI_10020498;
	scaffold580	TRF	Tandem_Repeat	319615	319661	94	+	.	.
scaffold580	subtractBed	intrn	322040	322085	.	+	.	Parent=CGI_10020498;
	scaffold580	TRF	Tandem_Repeat	322040	322085	92	+	.	.
scaffold580	subtractBed	intrn	329888	329949	.	+	.	Parent=CGI_10020499;
	scaffold580	TRF	Tandem_Repeat	329888	329949	124	+	.	.
scaffold580	subtractBed	intrn	339831	339928	.	-	.	Parent=CGI_10020500;
	scaffold580	TRF	Tandem_Repeat	339831	339928	127	+	.	.
scaffold580	subtractBed	intrn	346094	346151	.	-	.	Parent=CGI_10020500;
	scaffold580	TRF	Tandem_Repeat	346094	346151	53	+	.	.
scaffold580	subtractBed	intrn	346095	346163	.	-	.	Parent=CGI_10020500;
	scaffold580	TRF	Tandem_Repeat	346095	346163	54	+	.	.
scaffold580	subtractBed	intrn	346103	346151	.	-	.	Parent=CGI_10020500;
	scaffold580	TRF	Tandem_Repeat	346103	346151	64	+	.	.
scaffold580	subtractBed	intrn	411121	411491	.	-	.	Parent=CGI_10020504;
	scaffold580	TRF	Tandem_Repeat	411121	411491	598	+	.	.
scaffold580	subtractBed	intrn	413518	413774	.	-	.	Parent=CGI_10020504;
	scaffold580	TRF	Tandem_Repeat	413518	413774	250	+	.	.
scaffold580	subtractBed	intrn	416425	416481	.	-	.	Parent=CGI_10020504;
	scaffold580	TRF	Tandem_Repeat	416425	416481	114	+	.	.
scaffold580	subtractBed	intrn	428978	429665	.	-	.	Parent=CGI_10020505;
	scaffold580	TRF	Tandem_Repeat	428955	429665	723	+	.	.
scaffold580	subtractBed	intrn	430904	430977	.	-	.	Parent=CGI_10020505;
	scaffold580	TRF	Tandem_Repeat	430904	430977	141	+	.	.
scaffold580	subtractBed	intrn	433429	433470	.	-	.	Parent=CGI_10020505;
	scaffold580	TRF	Tandem_Repeat	433429	433470	59	+	.	.
scaffold580	subtractBed	intrn	435220	436065	.	-	.	Parent=CGI_10020505;
	scaffold580	TRF	Tandem_Repeat	435220	436065	1131	+	.	.
scaffold580	subtractBed	intrn	494381	494566	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	494381	494566	223	+	.	.
scaffold580	subtractBed	intrn	497977	498750	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	497977	498750	1047	+	.	.
scaffold580	subtractBed	intrn	499046	499431	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499046	499431	106	+	.	.
scaffold580	subtractBed	intrn	499243	499419	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499243	499419	116	+	.	.
scaffold580	subtractBed	intrn	499294	499367	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499294	499367	60	+	.	.
scaffold580	subtractBed	intrn	499242	499396	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499242	499396	93	+	.	.
scaffold580	subtractBed	intrn	499298	499366	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499298	499366	52	+	.	.
scaffold580	subtractBed	intrn	499285	499433	.	-	.	Parent=CGI_10020510;
	scaffold580	TRF	Tandem_Repeat	499285	499433	89	+	.	.
scaffold580	subtractBed	intrn	494381	494566	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	494381	494566	223	+	.	.
scaffold580	subtractBed	intrn	497977	498750	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	497977	498750	1047	+	.	.
scaffold580	subtractBed	intrn	499046	499431	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499046	499431	106	+	.	.
scaffold580	subtractBed	intrn	499243	499419	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499243	499419	116	+	.	.
scaffold580	subtractBed	intrn	499294	499367	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499294	499367	60	+	.	.
scaffold580	subtractBed	intrn	499242	499396	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499242	499396	93	+	.	.
scaffold580	subtractBed	intrn	499298	499366	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499298	499366	52	+	.	.
scaffold580	subtractBed	intrn	499285	499433	.	+	.	Parent=CGI_10020511;
	scaffold580	TRF	Tandem_Repeat	499285	499433	89	+	.	.
scaffold580	subtractBed	intrn	536644	536705	.	+	.	Parent=CGI_10020515;
	scaffold580	TRF	Tandem_Repeat	536644	536705	115	+	.	.
scaffold580	subtractBed	intrn	540907	540978	.	+	.	Parent=CGI_10020515;
	scaffold580	TRF	Tandem_Repeat	540907	540978	54	+	.	.
scaffold580	subtractBed	intrn	542997	543254	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	542997	543254	69	-	.	.
scaffold580	subtractBed	intrn	543949	544257	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	543949	544257	53	-	.	.
scaffold580	subtractBed	intrn	543623	543979	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	543623	543979	39	-	.	.
scaffold580	subtractBed	intrn	544096	544257	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	544096	544257	63	-	.	.
scaffold580	subtractBed	intrn	545532	546152	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Gypsy-Troyk	545532	546152	234	+	.	.
scaffold580	subtractBed	intrn	543245	543373	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	543245	543373	59	-	.	.
scaffold580	subtractBed	intrn	542911	543000	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	542911	543000	53	-	.	.
scaffold580	subtractBed	intrn	542997	543143	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	542997	543143	80	-	.	.
scaffold580	subtractBed	intrn	547518	547538	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Gypsy-Troyk	547518	547784	72	+	.	.
scaffold580	subtractBed	intrn	545642	547507	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Gypsy-Troyk	545642	547507	1229	+	.	.
scaffold580	subtractBed	intrn	547530	547538	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Gypsy-Troyk	547530	547856	32	+	.	.
scaffold580	subtractBed	intrn	543245	543409	.	+	.	Parent=CGI_10020515;
	scaffold580	WUBlastX	LTR_Pao	543245	543409	34	-	.	.
scaffold580	subtractBed	intrn	549386	549979	.	+	.	Parent=CGI_10020516;
	scaffold580	WUBlastX	DNA_Harbinger	549386	549979	224	+	.	.
scaffold580	subtractBed	intrn	549245	549868	.	+	.	Parent=CGI_10020516;
	scaffold580	WUBlastX	DNA_Harbinger	549245	549868	58	+	.	.
scaffold580	subtractBed	intrn	580633	580673	.	-	.	Parent=CGI_10020520;
	scaffold580	TRF	Tandem_Repeat	580633	580673	57	+	.	.
scaffold580	subtractBed	intrn	586316	586362	.	-	.	Parent=CGI_10020521;
	scaffold580	TRF	Tandem_Repeat	586316	586362	94	+	.	.
scaffold580	subtractBed	intrn	614757	614805	.	+	.	Parent=CGI_10020524;
	scaffold580	TRF	Tandem_Repeat	614757	614805	98	+	.	.
scaffold580	subtractBed	intrn	623190	623293	.	-	.	Parent=CGI_10020525;
	scaffold580	TRF	Tandem_Repeat	623190	623293	163	+	.	.
scaffold580	subtractBed	intrn	637521	637573	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	637521	637573	97	+	.	.
scaffold580	subtractBed	intrn	642207	642254	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	642207	642254	96	+	.	.
scaffold580	subtractBed	intrn	646574	646610	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	646574	646610	74	+	.	.
scaffold580	subtractBed	intrn	648450	648626	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	648450	648626	174	+	.	.
scaffold580	subtractBed	intrn	648654	648817	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	648654	648817	193	+	.	.
scaffold580	subtractBed	intrn	648902	648988	.	-	.	Parent=CGI_10020526;
	scaffold580	TRF	Tandem_Repeat	648902	648988	122	+	.	.
scaffold581	subtractBed	intrn	16973	17029	.	-	.	Parent=CGI_10013733;
	scaffold581	TRF	Tandem_Repeat	16973	17029	98	+	.	.
scaffold581	subtractBed	intrn	19760	19876	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	19760	19876	26	+	.	.
scaffold581	subtractBed	intrn	17253	17987	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	17253	17987	177	+	.	.
scaffold581	subtractBed	intrn	18255	18542	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	18255	18542	279	+	.	.
scaffold581	subtractBed	intrn	18539	19306	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	18539	19306	267	+	.	.
scaffold581	subtractBed	intrn	17989	18255	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	17989	18255	69	+	.	.
scaffold581	subtractBed	intrn	20086	20187	.	-	.	Parent=CGI_10013733;
	scaffold581	WUBlastX	LINE_L1-Tx1	20086	20187	32	+	.	.
scaffold581	subtractBed	intrn	45225	45272	.	-	.	Parent=CGI_10013734;
	scaffold581	TRF	Tandem_Repeat	45225	45272	51	+	.	.
scaffold581	subtractBed	intrn	45230	45280	.	-	.	Parent=CGI_10013734;
	scaffold581	TRF	Tandem_Repeat	45230	45280	57	+	.	.
scaffold581	subtractBed	intrn	61475	61559	.	-	.	Parent=CGI_10013736;
	scaffold581	TRF	Tandem_Repeat	61475	61559	154	+	.	.
scaffold581	subtractBed	intrn	62889	62931	.	-	.	Parent=CGI_10013736;
	scaffold581	TRF	Tandem_Repeat	62889	62931	86	+	.	.
scaffold581	subtractBed	intrn	69618	69643	.	-	.	Parent=CGI_10013736;
	scaffold581	TRF	Tandem_Repeat	69618	69643	52	+	.	.
scaffold581	subtractBed	intrn	188844	189065	.	-	.	Parent=CGI_10013740;
	scaffold581	WUBlastX	DNA_Sola	188844	189065	78	-	.	.
scaffold581	subtractBed	intrn	197904	198173	.	-	.	Parent=CGI_10013741;
	scaffold581	WUBlastX	DNA_En-Spm	197904	198173	83	-	.	.
scaffold581	subtractBed	intrn	218379	218589	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	218379	218589	129	+	.	.
scaffold581	subtractBed	intrn	222921	222997	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	222921	222997	136	+	.	.
scaffold581	subtractBed	intrn	237283	237410	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	237283	237410	121	+	.	.
scaffold581	subtractBed	intrn	237304	237412	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	237304	237412	164	+	.	.
scaffold581	subtractBed	intrn	239010	239047	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	239010	239047	76	+	.	.
scaffold581	subtractBed	intrn	275379	275431	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	275379	275431	60	+	.	.
scaffold581	subtractBed	intrn	275382	275428	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	275382	275428	53	+	.	.
scaffold581	subtractBed	intrn	275439	275474	.	-	.	Parent=CGI_10013742;
	scaffold581	TRF	Tandem_Repeat	275439	275474	54	+	.	.
scaffold581	subtractBed	intrn	275490	275978	.	-	.	Parent=CGI_10013742;
	scaffold581	WUBlastX	LINE_L1-Tx1	275490	275978	116	-	.	.
scaffold581	subtractBed	intrn	275640	276038	.	-	.	Parent=CGI_10013742;
	scaffold581	WUBlastX	LINE_L1-Tx1	275640	276038	42	-	.	.
scaffold581	subtractBed	intrn	308754	309819	.	+	.	Parent=CGI_10013743;
	scaffold581	TRF	Tandem_Repeat	308754	309819	945	+	.	.
scaffold581	subtractBed	intrn	321209	321290	.	+	.	Parent=CGI_10013744;
	scaffold581	TRF	Tandem_Repeat	321209	321290	155	+	.	.
scaffold582	subtractBed	intrn	12557	12588	.	-	.	Parent=CGI_10003412;
	scaffold582	TRF	Tandem_Repeat	12557	12588	57	+	.	.
scaffold583	subtractBed	intrn	30126	30150	.	+	.	Parent=CGI_10023603;
	scaffold583	TRF	Tandem_Repeat	30126	30150	50	+	.	.
scaffold583	subtractBed	intrn	28713	29648	.	+	.	Parent=CGI_10023603;
	scaffold583	WUBlastX	LINE_L1-Tx1	28713	29648	275	-	.	.
scaffold583	subtractBed	intrn	30245	30501	.	+	.	Parent=CGI_10023603;
	scaffold583	WUBlastX	LTR_Gypsy	30245	30553	129	+	.	.
scaffold583	subtractBed	intrn	30151	30501	.	+	.	Parent=CGI_10023603;
	scaffold583	WUBlastX	LTR_Gypsy	30151	30693	103	+	.	.
scaffold583	subtractBed	intrn	30194	30496	.	+	.	Parent=CGI_10023603;
	scaffold583	WUBlastX	LTR_Gypsy	30194	30496	207	+	.	.
scaffold583	subtractBed	intrn	86063	86109	.	+	.	Parent=CGI_10023604;
	scaffold583	TRF	Tandem_Repeat	86063	86109	94	+	.	.
scaffold583	subtractBed	intrn	137574	137602	.	-	.	Parent=CGI_10023607;
	scaffold583	TRF	Tandem_Repeat	137574	137602	58	+	.	.
scaffold583	subtractBed	intrn	139840	139917	.	-	.	Parent=CGI_10023607;
	scaffold583	TRF	Tandem_Repeat	139840	139917	156	+	.	.
scaffold583	subtractBed	intrn	141551	141607	.	-	.	Parent=CGI_10023607;
	scaffold583	TRF	Tandem_Repeat	141551	141607	62	+	.	.
scaffold583	subtractBed	intrn	150052	150091	.	-	.	Parent=CGI_10023608;
	scaffold583	TRF	Tandem_Repeat	150052	150091	80	+	.	.
scaffold583	subtractBed	intrn	161299	161352	.	-	.	Parent=CGI_10023609;
	scaffold583	TRF	Tandem_Repeat	161299	161352	108	+	.	.
scaffold583	subtractBed	intrn	165274	165310	.	-	.	Parent=CGI_10023609;
	scaffold583	TRF	Tandem_Repeat	165274	165310	51	+	.	.
scaffold583	subtractBed	intrn	165278	165311	.	-	.	Parent=CGI_10023609;
	scaffold583	TRF	Tandem_Repeat	165278	165311	54	+	.	.
scaffold583	subtractBed	intrn	171022	171072	.	-	.	Parent=CGI_10023609;
	scaffold583	TRF	Tandem_Repeat	171022	171072	102	+	.	.
scaffold583	subtractBed	intrn	193166	193209	.	+	.	Parent=CGI_10023610;
	scaffold583	TRF	Tandem_Repeat	193166	193209	88	+	.	.
scaffold583	subtractBed	intrn	202402	202451	.	-	.	Parent=CGI_10023611;
	scaffold583	TRF	Tandem_Repeat	202402	202451	57	+	.	.
scaffold583	subtractBed	intrn	213332	214316	.	+	.	Parent=CGI_10023612;
	scaffold583	TRF	Tandem_Repeat	213332	214316	1551	+	.	.
scaffold583	subtractBed	intrn	218031	218154	.	+	.	Parent=CGI_10023612;
	scaffold583	TRF	Tandem_Repeat	218031	218154	176	+	.	.
scaffold583	subtractBed	intrn	246097	248010	.	+	.	Parent=CGI_10023613;
	scaffold583	WUBlastX	DNA_En-Spm	246097	248010	1217	+	.	.
scaffold583	subtractBed	intrn	249244	249361	.	+	.	Parent=CGI_10023613;
	scaffold583	TRF	Tandem_Repeat	249244	249361	59	+	.	.
scaffold583	subtractBed	intrn	249224	249430	.	+	.	Parent=CGI_10023613;
	scaffold583	TRF	Tandem_Repeat	249224	249430	79	+	.	.
scaffold583	subtractBed	intrn	249229	249435	.	+	.	Parent=CGI_10023613;
	scaffold583	TRF	Tandem_Repeat	249229	249435	369	+	.	.
scaffold583	subtractBed	intrn	249325	249435	.	+	.	Parent=CGI_10023613;
	scaffold583	TRF	Tandem_Repeat	249325	249435	57	+	.	.
scaffold583	subtractBed	intrn	264195	264210	.	-	.	Parent=CGI_10023614;
	scaffold583	WUBlastX	DNA_MuDR	263794	264210	59	-	.	.
scaffold583	subtractBed	intrn	266458	266709	.	-	.	Parent=CGI_10023615;
	scaffold583	WUBlastX	LTR_Gypsy	266364	266852	42	-	.	.
scaffold583	subtractBed	intrn	266458	266709	.	-	.	Parent=CGI_10023615;
	scaffold583	WUBlastX	LTR_Gypsy	266331	266954	26	-	.	.
scaffold583	subtractBed	intrn	316908	316958	.	-	.	Parent=CGI_10023620;
	scaffold583	TRF	Tandem_Repeat	316908	316958	102	+	.	.
scaffold583	subtractBed	intrn	373139	373183	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	373139	373183	90	+	.	.
scaffold583	subtractBed	intrn	374997	375038	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	374997	375038	57	+	.	.
scaffold583	subtractBed	intrn	377149	377391	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	377149	377391	129	+	.	.
scaffold583	subtractBed	intrn	376712	376951	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	376712	376951	178	+	.	.
scaffold583	subtractBed	intrn	376726	377393	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	376726	377393	452	+	.	.
scaffold583	subtractBed	intrn	379915	379946	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	379915	379946	64	+	.	.
scaffold583	subtractBed	intrn	380322	380367	.	-	.	Parent=CGI_10023621;
	scaffold583	TRF	Tandem_Repeat	380322	380367	92	+	.	.
scaffold583	subtractBed	intrn	388460	388600	.	-	.	Parent=CGI_10023621;
	scaffold583	WUBlastX	LINE_CR1-L2	388460	388600	46	-	.	.
scaffold583	subtractBed	intrn	388212	388433	.	-	.	Parent=CGI_10023621;
	scaffold583	WUBlastX	LINE_CR1-L2	388212	388433	23	-	.	.
scaffold583	subtractBed	intrn	388016	388180	.	-	.	Parent=CGI_10023621;
	scaffold583	WUBlastX	LINE_CR1-L2	388016	388180	59	-	.	.
scaffold583	subtractBed	intrn	388197	388331	.	-	.	Parent=CGI_10023621;
	scaffold583	WUBlastX	LINE_CR1-L2	388197	388331	32	-	.	.
scaffold583	subtractBed	intrn	416219	416840	.	-	.	Parent=CGI_10023625;
	scaffold583	TRF	Tandem_Repeat	416219	416840	958	+	.	.
scaffold583	subtractBed	intrn	421855	421899	.	-	.	Parent=CGI_10023625;
	scaffold583	TRF	Tandem_Repeat	421855	421899	67	+	.	.
scaffold583	subtractBed	intrn	426998	427089	.	-	.	Parent=CGI_10023625;
	scaffold583	TRF	Tandem_Repeat	426998	427089	116	+	.	.
scaffold583	subtractBed	intrn	435080	435859	.	-	.	Parent=CGI_10023625;
	scaffold583	TRF	Tandem_Repeat	435080	435859	654	+	.	.
scaffold583	subtractBed	intrn	437587	441390	.	-	.	Parent=CGI_10023625;
	scaffold583	WUBlastX	LINE_L1-Tx1	437587	441390	1955	-	.	.
scaffold583	subtractBed	intrn	441936	442538	.	-	.	Parent=CGI_10023625;
	scaffold583	WUBlastX	LINE_L1	441936	442538	45	-	.	.
scaffold583	subtractBed	intrn	441747	442409	.	-	.	Parent=CGI_10023625;
	scaffold583	WUBlastX	LINE_L2	441747	442409	123	-	.	.
scaffold583	subtractBed	intrn	444366	444405	.	-	.	Parent=CGI_10023625;
	scaffold583	TRF	Tandem_Repeat	444366	444405	80	+	.	.
scaffold583	subtractBed	intrn	473798	474034	.	+	.	Parent=CGI_10023626;
	scaffold583	WUBlastX	DNA_Sola	473798	474034	88	-	.	.
scaffold583	subtractBed	intrn	482688	482839	.	+	.	Parent=CGI_10023626;
	scaffold583	TRF	Tandem_Repeat	482688	482839	209	+	.	.
scaffold583	subtractBed	intrn	483515	483605	.	+	.	Parent=CGI_10023626;
	scaffold583	TRF	Tandem_Repeat	483515	483605	146	+	.	.
scaffold583	subtractBed	intrn	483571	483660	.	+	.	Parent=CGI_10023626;
	scaffold583	TRF	Tandem_Repeat	483571	483660	99	+	.	.
scaffold583	subtractBed	intrn	485135	485241	.	+	.	Parent=CGI_10023626;
	scaffold583	TRF	Tandem_Repeat	485135	485241	142	+	.	.
scaffold583	subtractBed	intrn	492565	492600	.	+	.	Parent=CGI_10023626;
	scaffold583	TRF	Tandem_Repeat	492565	492600	56	+	.	.
scaffold583	subtractBed	intrn	541203	541237	.	+	.	Parent=CGI_10023629;
	scaffold583	TRF	Tandem_Repeat	541203	541237	61	+	.	.
scaffold583	subtractBed	intrn	570770	570801	.	+	.	Parent=CGI_10023631;
	scaffold583	TRF	Tandem_Repeat	570770	570801	57	+	.	.
scaffold583	subtractBed	intrn	572565	572620	.	+	.	Parent=CGI_10023631;
	scaffold583	TRF	Tandem_Repeat	572565	572620	103	+	.	.
scaffold583	subtractBed	intrn	592539	592619	.	-	.	Parent=CGI_10023632;
	scaffold583	TRF	Tandem_Repeat	592539	592619	155	+	.	.
scaffold583	subtractBed	intrn	594616	594657	.	-	.	Parent=CGI_10023632;
	scaffold583	TRF	Tandem_Repeat	594616	594657	84	+	.	.
scaffold583	subtractBed	intrn	652012	652047	.	-	.	Parent=CGI_10023637;
	scaffold583	TRF	Tandem_Repeat	652012	652047	72	+	.	.
scaffold583	subtractBed	intrn	701208	701479	.	+	.	Parent=CGI_10023639;
	scaffold583	TRF	Tandem_Repeat	701208	701479	348	+	.	.
scaffold583	subtractBed	intrn	734363	734704	.	+	.	Parent=CGI_10023642;
	scaffold583	WUBlastX	LINE_L2	734363	734704	71	-	.	.
scaffold583	subtractBed	intrn	745405	746562	.	-	.	Parent=CGI_10023643;
	scaffold583	WUBlastX	LINE_CR1	745405	746562	216	-	.	.
scaffold583	subtractBed	intrn	746558	747331	.	-	.	Parent=CGI_10023643;
	scaffold583	WUBlastX	LINE_CR1	746558	747331	234	-	.	.
scaffold583	subtractBed	intrn	746077	747150	.	-	.	Parent=CGI_10023643;
	scaffold583	WUBlastX	LINE_CR1	746077	747150	319	-	.	.
scaffold583	subtractBed	intrn	746077	746562	.	-	.	Parent=CGI_10023643;
	scaffold583	WUBlastX	LINE_CR1	746077	746562	368	-	.	.
scaffold583	subtractBed	intrn	745405	746562	.	+	.	Parent=CGI_10023644;
	scaffold583	WUBlastX	LINE_CR1	745405	746562	216	-	.	.
scaffold583	subtractBed	intrn	746558	747331	.	+	.	Parent=CGI_10023644;
	scaffold583	WUBlastX	LINE_CR1	746558	747331	234	-	.	.
scaffold583	subtractBed	intrn	746077	747150	.	+	.	Parent=CGI_10023644;
	scaffold583	WUBlastX	LINE_CR1	746077	747150	319	-	.	.
scaffold583	subtractBed	intrn	746077	746562	.	+	.	Parent=CGI_10023644;
	scaffold583	WUBlastX	LINE_CR1	746077	746562	368	-	.	.
scaffold583	subtractBed	intrn	758167	759068	.	-	.	Parent=CGI_10023645;
	scaffold583	TRF	Tandem_Repeat	758167	759068	1197	+	.	.
scaffold583	subtractBed	intrn	797927	797960	.	+	.	Parent=CGI_10023648;
	scaffold583	TRF	Tandem_Repeat	797927	797960	68	+	.	.
scaffold583	subtractBed	intrn	812088	813222	.	-	.	Parent=CGI_10023649;
	scaffold583	TRF	Tandem_Repeat	812088	813222	1512	+	.	.
scaffold583	subtractBed	intrn	831793	831846	.	+	.	Parent=CGI_10023650;
	scaffold583	TRF	Tandem_Repeat	831793	831846	94	+	.	.
scaffold583	subtractBed	intrn	857571	857609	.	-	.	Parent=CGI_10023651;
	scaffold583	TRF	Tandem_Repeat	857571	857609	78	+	.	.
scaffold583	subtractBed	intrn	858124	858162	.	-	.	Parent=CGI_10023651;
	scaffold583	TRF	Tandem_Repeat	858124	858162	78	+	.	.
scaffold585	subtractBed	intrn	37138	37923	.	-	.	Parent=CGI_10005536;
	scaffold585	TRF	Tandem_Repeat	37138	37923	1136	+	.	.
scaffold585	subtractBed	intrn	43235	43570	.	-	.	Parent=CGI_10005536;
	scaffold585	TRF	Tandem_Repeat	43235	43570	451	+	.	.
scaffold585	subtractBed	intrn	84685	85414	.	-	.	Parent=CGI_10005540;
	scaffold585	TRF	Tandem_Repeat	84648	85414	1264	+	.	.
scaffold585	subtractBed	intrn	106932	107093	.	-	.	Parent=CGI_10005541;
	scaffold585	WUBlastX	LINE_RTE-BovB	106932	107093	106	+	.	.
scaffold585	subtractBed	intrn	106920	107138	.	-	.	Parent=CGI_10005541;
	scaffold585	WUBlastX	LINE_RTE-RTE	106920	107138	91	+	.	.
scaffold585	subtractBed	intrn	106902	107078	.	-	.	Parent=CGI_10005541;
	scaffold585	WUBlastX	LINE_RTE-BovB	106902	107078	101	+	.	.
scaffold585	subtractBed	intrn	106833	107093	.	-	.	Parent=CGI_10005541;
	scaffold585	WUBlastX	LINE_RTE-BovB	106833	107093	77	+	.	.
scaffold585	subtractBed	intrn	125140	125401	.	+	.	Parent=CGI_10005542;
	scaffold585	TRF	Tandem_Repeat	125140	125401	362	+	.	.
scaffold585	subtractBed	intrn	125140	125401	.	-	.	Parent=CGI_10005544;
	scaffold585	TRF	Tandem_Repeat	125140	125401	362	+	.	.
scaffold585	subtractBed	intrn	127755	128516	.	-	.	Parent=CGI_10005544;
	scaffold585	WUBlastX	LINE_RTE-BovB	127755	128516	333	+	.	.
scaffold585	subtractBed	intrn	127806	128669	.	-	.	Parent=CGI_10005544;
	scaffold585	WUBlastX	LINE_RTE-BovB	127806	128669	59	+	.	.
scaffold586	subtractBed	intrn	21217	21266	.	+	.	Parent=CGI_10017993;
	scaffold586	TRF	Tandem_Repeat	21217	21266	91	+	.	.
scaffold586	subtractBed	intrn	47021	47102	.	-	.	Parent=CGI_10017994;
	scaffold586	TRF	Tandem_Repeat	47021	47102	155	+	.	.
scaffold586	subtractBed	intrn	51873	52021	.	-	.	Parent=CGI_10017994;
	scaffold586	TRF	Tandem_Repeat	51873	52021	88	+	.	.
scaffold586	subtractBed	intrn	53047	53820	.	-	.	Parent=CGI_10017994;
	scaffold586	TRF	Tandem_Repeat	53047	53820	743	+	.	.
scaffold586	subtractBed	intrn	134092	134282	.	-	.	Parent=CGI_10017998;
	scaffold586	TRF	Tandem_Repeat	134092	134282	165	+	.	.
scaffold586	subtractBed	intrn	136184	136349	.	-	.	Parent=CGI_10017998;
	scaffold586	TRF	Tandem_Repeat	136184	136349	167	+	.	.
scaffold586	subtractBed	intrn	149596	149643	.	+	.	Parent=CGI_10017999;
	scaffold586	TRF	Tandem_Repeat	149596	149643	96	+	.	.
scaffold586	subtractBed	intrn	161758	161835	.	-	.	Parent=CGI_10018000;
	scaffold586	TRF	Tandem_Repeat	161758	161835	93	+	.	.
scaffold586	subtractBed	intrn	176846	176890	.	-	.	Parent=CGI_10018000;
	scaffold586	TRF	Tandem_Repeat	176846	176890	76	+	.	.
scaffold586	subtractBed	intrn	178358	178456	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	178358	178456	49	-	.	.
scaffold586	subtractBed	intrn	177903	178190	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	177903	178190	68	-	.	.
scaffold586	subtractBed	intrn	178005	178190	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	178005	178190	94	-	.	.
scaffold586	subtractBed	intrn	178005	178151	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	178005	178151	101	-	.	.
scaffold586	subtractBed	intrn	177993	178244	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	177993	178244	49	-	.	.
scaffold586	subtractBed	intrn	178244	178459	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	178244	178459	37	-	.	.
scaffold586	subtractBed	intrn	177954	178151	.	-	.	Parent=CGI_10018000;
	scaffold586	WUBlastX	LINE_RTE-X	177954	178151	87	-	.	.
scaffold586	subtractBed	intrn	211195	211236	.	+	.	Parent=CGI_10018003;
	scaffold586	TRF	Tandem_Repeat	211195	211236	50	+	.	.
scaffold586	subtractBed	intrn	217165	217324	.	+	.	Parent=CGI_10018003;
	scaffold586	TRF	Tandem_Repeat	217165	217324	207	+	.	.
scaffold586	subtractBed	intrn	230639	230813	.	-	.	Parent=CGI_10018004;
	scaffold586	TRF	Tandem_Repeat	230639	230813	183	+	.	.
scaffold586	subtractBed	intrn	230639	230760	.	-	.	Parent=CGI_10018004;
	scaffold586	TRF	Tandem_Repeat	230639	230760	149	+	.	.
scaffold586	subtractBed	intrn	231393	231430	.	-	.	Parent=CGI_10018004;
	scaffold586	TRF	Tandem_Repeat	231393	231430	76	+	.	.
scaffold586	subtractBed	intrn	232871	233078	.	-	.	Parent=CGI_10018004;
	scaffold586	TRF	Tandem_Repeat	232871	233078	149	+	.	.
scaffold586	subtractBed	intrn	239541	239640	.	-	.	Parent=CGI_10018004;
	scaffold586	TRF	Tandem_Repeat	239541	239640	116	+	.	.
scaffold586	subtractBed	intrn	288633	288676	.	+	.	Parent=CGI_10018005;
	scaffold586	TRF	Tandem_Repeat	288633	288676	88	+	.	.
scaffold586	subtractBed	intrn	298719	299575	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	298719	299575	1245	+	.	.
scaffold586	subtractBed	intrn	301248	301300	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	301248	301300	106	+	.	.
scaffold586	subtractBed	intrn	307371	309672	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	307371	309672	3564	+	.	.
scaffold586	subtractBed	intrn	307371	309672	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	307371	309672	3644	+	.	.
scaffold586	subtractBed	intrn	312318	312381	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	312318	312381	128	+	.	.
scaffold586	subtractBed	intrn	316235	316276	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	316235	316276	84	+	.	.
scaffold586	subtractBed	intrn	340483	340528	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	340483	340528	83	+	.	.
scaffold586	subtractBed	intrn	343059	343280	.	+	.	Parent=CGI_10018006;
	scaffold586	TRF	Tandem_Repeat	343059	343280	175	+	.	.
scaffold586	subtractBed	intrn	370537	370588	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	370537	370588	104	+	.	.
scaffold586	subtractBed	intrn	397992	398036	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	397992	398036	81	+	.	.
scaffold586	subtractBed	intrn	398512	398549	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	398512	398549	67	+	.	.
scaffold586	subtractBed	intrn	401646	401718	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	401646	401718	112	+	.	.
scaffold586	subtractBed	intrn	401855	401892	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	401855	401892	67	+	.	.
scaffold586	subtractBed	intrn	401985	402022	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	401985	402022	76	+	.	.
scaffold586	subtractBed	intrn	413682	413744	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	413682	413744	126	+	.	.
scaffold586	subtractBed	intrn	415468	415621	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	415468	415621	256	+	.	.
scaffold586	subtractBed	intrn	416650	416679	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	416650	416679	60	+	.	.
scaffold586	subtractBed	intrn	426002	426052	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	426002	426052	102	+	.	.
scaffold586	subtractBed	intrn	428488	428548	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	428488	428548	99	+	.	.
scaffold586	subtractBed	intrn	428488	428548	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	428488	428548	86	+	.	.
scaffold586	subtractBed	intrn	433863	433898	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	433863	433898	72	+	.	.
scaffold586	subtractBed	intrn	434184	434442	.	+	.	Parent=CGI_10018007;
	scaffold586	TRF	Tandem_Repeat	434184	434442	292	+	.	.
scaffold586	subtractBed	intrn	449372	449397	.	-	.	Parent=CGI_10018008;
	scaffold586	TRF	Tandem_Repeat	449372	449397	52	+	.	.
scaffold586	subtractBed	intrn	459342	459683	.	-	.	Parent=CGI_10018008;
	scaffold586	WUBlastX	DNA_TcMar-Tc1	459342	459683	34	+	.	.
scaffold586	subtractBed	intrn	459632	460252	.	-	.	Parent=CGI_10018008;
	scaffold586	WUBlastX	DNA_TcMar-Tc1	459632	460252	380	+	.	.
scaffold586	subtractBed	intrn	465543	465645	.	-	.	Parent=CGI_10018008;
	scaffold586	TRF	Tandem_Repeat	465543	465645	64	+	.	.
scaffold586	subtractBed	intrn	464238	464426	.	-	.	Parent=CGI_10018008;
	scaffold586	WUBlastX	LTR_Ngaro	464238	464426	23	+	.	.
scaffold586	subtractBed	intrn	464435	464527	.	-	.	Parent=CGI_10018008;
	scaffold586	WUBlastX	LTR_Ngaro	464435	464527	22	+	.	.
scaffold586	subtractBed	intrn	464733	464888	.	-	.	Parent=CGI_10018008;
	scaffold586	WUBlastX	LTR_Ngaro	464733	464888	33	+	.	.
scaffold586	subtractBed	intrn	474614	474648	.	-	.	Parent=CGI_10018008;
	scaffold586	TRF	Tandem_Repeat	474614	474648	54	+	.	.
scaffold586	subtractBed	intrn	477594	477869	.	-	.	Parent=CGI_10018009;
	scaffold586	TRF	Tandem_Repeat	477594	477869	288	+	.	.
scaffold586	subtractBed	intrn	477684	478183	.	-	.	Parent=CGI_10018009;
	scaffold586	TRF	Tandem_Repeat	477684	478183	718	+	.	.
scaffold587	subtractBed	intrn	5030	5076	.	-	.	Parent=CGI_10006887;
	scaffold587	TRF	Tandem_Repeat	5030	5076	67	+	.	.
scaffold587	subtractBed	intrn	3017	3547	.	-	.	Parent=CGI_10006887;
	scaffold587	WUBlastX	DNA_TcMar-ISRm1	3017	3547	113	+	.	.
scaffold587	subtractBed	intrn	2789	3472	.	-	.	Parent=CGI_10006887;
	scaffold587	WUBlastX	DNA_TcMar-ISRm1	2789	3472	104	+	.	.
scaffold587	subtractBed	intrn	2562	2816	.	-	.	Parent=CGI_10006887;
	scaffold587	WUBlastX	DNA_TcMar-Stowa	2562	2816	60	+	.	.
scaffold587	subtractBed	intrn	8536	8581	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	8536	8581	92	+	.	.
scaffold587	subtractBed	intrn	10230	10282	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	10230	10282	88	+	.	.
scaffold587	subtractBed	intrn	10553	10592	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	10553	10592	80	+	.	.
scaffold587	subtractBed	intrn	13487	14261	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	13487	14261	1234	+	.	.
scaffold587	subtractBed	intrn	15300	15412	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	15300	15412	172	+	.	.
scaffold587	subtractBed	intrn	16462	17055	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	16462	17055	565	+	.	.
scaffold587	subtractBed	intrn	21067	21111	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	21067	21111	90	+	.	.
scaffold587	subtractBed	intrn	21783	22486	.	-	.	Parent=CGI_10006888;
	scaffold587	TRF	Tandem_Repeat	21783	22486	989	+	.	.
scaffold587	subtractBed	intrn	68640	68685	.	+	.	Parent=CGI_10006890;
	scaffold587	TRF	Tandem_Repeat	68640	68685	92	+	.	.
scaffold587	subtractBed	intrn	108158	108188	.	+	.	Parent=CGI_10006892;
	scaffold587	TRF	Tandem_Repeat	108158	108188	53	+	.	.
scaffold587	subtractBed	intrn	110464	110498	.	+	.	Parent=CGI_10006892;
	scaffold587	TRF	Tandem_Repeat	110464	110498	70	+	.	.
scaffold587	subtractBed	intrn	110704	110871	.	+	.	Parent=CGI_10006892;
	scaffold587	WUBlastX	LINE_L2	110704	110871	77	-	.	.
scaffold587	subtractBed	intrn	115477	115520	.	+	.	Parent=CGI_10006892;
	scaffold587	TRF	Tandem_Repeat	115477	115520	88	+	.	.
scaffold587	subtractBed	intrn	162681	162804	.	+	.	Parent=CGI_10006894;
	scaffold587	TRF	Tandem_Repeat	162681	162804	59	+	.	.
scaffold588	subtractBed	intrn	11495	12233	.	+	.	Parent=CGI_10016208;
	scaffold588	TRF	Tandem_Repeat	11495	12233	802	+	.	.
scaffold588	subtractBed	intrn	20636	20675	.	+	.	Parent=CGI_10016208;
	scaffold588	TRF	Tandem_Repeat	20636	20675	80	+	.	.
scaffold588	subtractBed	intrn	23307	23684	.	+	.	Parent=CGI_10016208;
	scaffold588	WUBlastX	DNA_Harbinger	23307	23684	93	+	.	.
scaffold588	subtractBed	intrn	23489	23953	.	+	.	Parent=CGI_10016208;
	scaffold588	WUBlastX	DNA_Harbinger	23489	23953	112	+	.	.
scaffold588	subtractBed	intrn	23030	23107	.	+	.	Parent=CGI_10016208;
	scaffold588	WUBlastX	DNA_Harbinger	23030	23107	55	+	.	.
scaffold588	subtractBed	intrn	23119	23352	.	+	.	Parent=CGI_10016208;
	scaffold588	WUBlastX	DNA_Harbinger	23119	23352	178	+	.	.
scaffold588	subtractBed	intrn	41422	41462	.	+	.	Parent=CGI_10016209;
	scaffold588	TRF	Tandem_Repeat	41422	41462	82	+	.	.
scaffold588	subtractBed	intrn	43842	43886	.	+	.	Parent=CGI_10016209;
	scaffold588	TRF	Tandem_Repeat	43842	43886	72	+	.	.
scaffold588	subtractBed	intrn	46052	46093	.	+	.	Parent=CGI_10016209;
	scaffold588	TRF	Tandem_Repeat	46052	46093	84	+	.	.
scaffold588	subtractBed	intrn	49234	49276	.	+	.	Parent=CGI_10016209;
	scaffold588	TRF	Tandem_Repeat	49234	49276	50	+	.	.
scaffold588	subtractBed	intrn	67275	67312	.	+	.	Parent=CGI_10016209;
	scaffold588	TRF	Tandem_Repeat	67275	67312	76	+	.	.
scaffold588	subtractBed	intrn	72036	72578	.	+	.	Parent=CGI_10016209;
	scaffold588	WUBlastX	LINE_L2	72036	72578	264	+	.	.
scaffold588	subtractBed	intrn	71973	72635	.	+	.	Parent=CGI_10016209;
	scaffold588	WUBlastX	LINE_L2	71973	72635	38	+	.	.
scaffold588	subtractBed	intrn	135001	135852	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	DNA_Harbinger	135001	135852	440	+	.	.
scaffold588	subtractBed	intrn	135034	136002	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	DNA_Harbinger	135034	136002	338	+	.	.
scaffold588	subtractBed	intrn	134415	134600	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	134415	134600	39	-	.	.
scaffold588	subtractBed	intrn	145921	146382	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	145921	146382	45	-	.	.
scaffold588	subtractBed	intrn	146002	146439	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	146002	146439	84	-	.	.
scaffold588	subtractBed	intrn	146429	146662	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	146429	146662	66	-	.	.
scaffold588	subtractBed	intrn	145993	146373	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	145993	146373	203	-	.	.
scaffold588	subtractBed	intrn	146468	146650	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_Penelope	146468	146650	81	-	.	.
scaffold588	subtractBed	intrn	150920	151417	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_L1-Tx1	150920	151417	106	-	.	.
scaffold588	subtractBed	intrn	151530	152063	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_L1	151530	152063	93	-	.	.
scaffold588	subtractBed	intrn	151758	152042	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_L1-Tx1	151758	152042	183	-	.	.
scaffold588	subtractBed	intrn	151151	151471	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_L1	151151	151471	75	-	.	.
scaffold588	subtractBed	intrn	151788	152114	.	+	.	Parent=CGI_10016211;
	scaffold588	WUBlastX	LINE_L1	151788	152114	97	-	.	.
scaffold588	subtractBed	intrn	237343	237376	.	-	.	Parent=CGI_10016217;
	scaffold588	TRF	Tandem_Repeat	237343	237376	50	+	.	.
scaffold588	subtractBed	intrn	242048	242101	.	-	.	Parent=CGI_10016217;
	scaffold588	TRF	Tandem_Repeat	242048	242101	63	+	.	.
scaffold588	subtractBed	intrn	244243	244416	.	-	.	Parent=CGI_10016217;
	scaffold588	TRF	Tandem_Repeat	244243	244416	246	+	.	.
scaffold588	subtractBed	intrn	257882	257933	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	257882	257933	61	+	.	.
scaffold588	subtractBed	intrn	257882	257933	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	257882	257933	61	+	.	.
scaffold588	subtractBed	intrn	257882	257933	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	257882	257933	61	+	.	.
scaffold588	subtractBed	intrn	257883	257953	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	257883	257953	56	+	.	.
scaffold588	subtractBed	intrn	257883	257945	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	257883	257945	54	+	.	.
scaffold588	subtractBed	intrn	258808	258855	.	-	.	Parent=CGI_10016218;
	scaffold588	TRF	Tandem_Repeat	258808	258855	71	+	.	.
scaffold588	subtractBed	intrn	271415	271491	.	-	.	Parent=CGI_10016219;
	scaffold588	TRF	Tandem_Repeat	271415	271491	118	+	.	.
scaffold588	subtractBed	intrn	271412	271485	.	-	.	Parent=CGI_10016219;
	scaffold588	TRF	Tandem_Repeat	271412	271485	112	+	.	.
scaffold588	subtractBed	intrn	280635	280698	.	-	.	Parent=CGI_10016219;
	scaffold588	TRF	Tandem_Repeat	280635	280698	65	+	.	.
scaffold588	subtractBed	intrn	368391	368463	.	-	.	Parent=CGI_10016222;
	scaffold588	TRF	Tandem_Repeat	368391	368463	146	+	.	.
scaffold588	subtractBed	intrn	390022	390197	.	+	.	Parent=CGI_10016224;
	scaffold588	TRF	Tandem_Repeat	390022	390197	244	+	.	.
scaffold588	subtractBed	intrn	390022	390197	.	+	.	Parent=CGI_10016224;
	scaffold588	TRF	Tandem_Repeat	390022	390197	280	+	.	.
scaffold588	subtractBed	intrn	390145	390197	.	+	.	Parent=CGI_10016224;
	scaffold588	TRF	Tandem_Repeat	390145	390197	55	+	.	.
scaffold588	subtractBed	intrn	396249	396982	.	+	.	Parent=CGI_10016225;
	scaffold588	TRF	Tandem_Repeat	396249	396982	881	+	.	.
scaffold588	subtractBed	intrn	403197	403223	.	+	.	Parent=CGI_10016225;
	scaffold588	TRF	Tandem_Repeat	403197	403223	54	+	.	.
scaffold588	subtractBed	intrn	400920	403151	.	+	.	Parent=CGI_10016225;
	scaffold588	WUBlastX	LTR_Gypsy-Cigr	400920	403151	1104	-	.	.
scaffold588	subtractBed	intrn	399981	401558	.	+	.	Parent=CGI_10016225;
	scaffold588	WUBlastX	LTR_Gypsy	399981	401558	253	-	.	.
scaffold588	subtractBed	intrn	399441	399527	.	+	.	Parent=CGI_10016225;
	scaffold588	WUBlastX	LTR_Gypsy	399441	399527	25	-	.	.
scaffold588	subtractBed	intrn	414310	415284	.	+	.	Parent=CGI_10016228;
	scaffold588	WUBlastX	LTR_Gypsy	414310	415284	57	+	.	.
scaffold588	subtractBed	intrn	414607	415302	.	+	.	Parent=CGI_10016228;
	scaffold588	WUBlastX	LTR_DIRS	414607	415302	388	+	.	.
scaffold588	subtractBed	intrn	415286	416479	.	+	.	Parent=CGI_10016228;
	scaffold588	WUBlastX	LTR_DIRS	415286	416479	409	+	.	.
scaffold588	subtractBed	intrn	414466	415206	.	+	.	Parent=CGI_10016228;
	scaffold588	WUBlastX	LTR_DIRS	414466	415206	119	+	.	.
scaffold588	subtractBed	intrn	416940	417866	.	+	.	Parent=CGI_10016228;
	scaffold588	WUBlastX	LTR_DIRS	416940	417866	453	+	.	.
scaffold59	subtractBed	intrn	1721	1774	.	+	.	Parent=CGI_10011269;
	scaffold59	TRF	Tandem_Repeat	1721	1774	108	+	.	.
scaffold59	subtractBed	intrn	3519	3573	.	+	.	Parent=CGI_10011269;
	scaffold59	TRF	Tandem_Repeat	3519	3573	110	+	.	.
scaffold59	subtractBed	intrn	8568	8593	.	+	.	Parent=CGI_10011269;
	scaffold59	TRF	Tandem_Repeat	8568	8593	52	+	.	.
scaffold59	subtractBed	intrn	71383	71637	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	71383	71637	37	-	.	.
scaffold59	subtractBed	intrn	73223	73879	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	73223	73879	160	-	.	.
scaffold59	subtractBed	intrn	73403	74212	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	73403	74212	160	-	.	.
scaffold59	subtractBed	intrn	71689	73131	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	71689	73131	948	-	.	.
scaffold59	subtractBed	intrn	71526	71690	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	71526	71690	106	-	.	.
scaffold59	subtractBed	intrn	70640	71383	.	-	.	Parent=CGI_10011272;
	scaffold59	WUBlastX	LTR_Ngaro	70640	71383	329	-	.	.
scaffold59	subtractBed	intrn	219515	220208	.	-	.	Parent=CGI_10011277;
	scaffold59	TRF	Tandem_Repeat	219515	220208	1055	+	.	.
scaffold59	subtractBed	intrn	221566	221649	.	-	.	Parent=CGI_10011277;
	scaffold59	TRF	Tandem_Repeat	221566	221649	62	+	.	.
scaffold59	subtractBed	intrn	221970	222326	.	-	.	Parent=CGI_10011277;
	scaffold59	TRF	Tandem_Repeat	221970	222326	483	+	.	.
scaffold59	subtractBed	intrn	221970	222326	.	-	.	Parent=CGI_10011277;
	scaffold59	TRF	Tandem_Repeat	221970	222326	454	+	.	.
scaffold59	subtractBed	intrn	225072	225105	.	-	.	Parent=CGI_10011277;
	scaffold59	TRF	Tandem_Repeat	225072	225105	59	+	.	.
scaffold59	subtractBed	intrn	232799	232848	.	-	.	Parent=CGI_10011278;
	scaffold59	TRF	Tandem_Repeat	232799	232848	100	+	.	.
scaffold59	subtractBed	intrn	238536	239303	.	-	.	Parent=CGI_10011278;
	scaffold59	WUBlastX	RC_Helitron	238536	239303	263	+	.	.
scaffold59	subtractBed	intrn	239340	239564	.	-	.	Parent=CGI_10011278;
	scaffold59	WUBlastX	RC_Helitron	239340	239564	104	+	.	.
scaffold59	subtractBed	intrn	239331	239636	.	-	.	Parent=CGI_10011278;
	scaffold59	WUBlastX	RC_Helitron	239331	239636	74	+	.	.
scaffold591	subtractBed	intrn	105123	105187	.	+	.	Parent=CGI_10027555;
	scaffold591	TRF	Tandem_Repeat	105123	105187	130	+	.	.
scaffold591	subtractBed	intrn	106139	106187	.	+	.	Parent=CGI_10027555;
	scaffold591	TRF	Tandem_Repeat	106139	106187	82	+	.	.
scaffold591	subtractBed	intrn	111261	111357	.	+	.	Parent=CGI_10027555;
	scaffold591	TRF	Tandem_Repeat	111261	111357	117	+	.	.
scaffold591	subtractBed	intrn	111530	111567	.	+	.	Parent=CGI_10027555;
	scaffold591	TRF	Tandem_Repeat	111530	111567	58	+	.	.
scaffold591	subtractBed	intrn	122465	122538	.	+	.	Parent=CGI_10027557;
	scaffold591	TRF	Tandem_Repeat	122465	122538	85	+	.	.
scaffold591	subtractBed	intrn	122468	122533	.	+	.	Parent=CGI_10027557;
	scaffold591	TRF	Tandem_Repeat	122468	122533	105	+	.	.
scaffold591	subtractBed	intrn	123034	123074	.	+	.	Parent=CGI_10027557;
	scaffold591	TRF	Tandem_Repeat	123034	123074	82	+	.	.
scaffold591	subtractBed	intrn	125478	125544	.	+	.	Parent=CGI_10027557;
	scaffold591	TRF	Tandem_Repeat	125478	125544	89	+	.	.
scaffold591	subtractBed	intrn	233674	233710	.	-	.	Parent=CGI_10027560;
	scaffold591	TRF	Tandem_Repeat	233674	233710	74	+	.	.
scaffold591	subtractBed	intrn	285691	285720	.	-	.	Parent=CGI_10027562;
	scaffold591	TRF	Tandem_Repeat	285691	285720	60	+	.	.
scaffold591	subtractBed	intrn	287221	287718	.	-	.	Parent=CGI_10027562;
	scaffold591	WUBlastX	DNA_TcMar-Tc1	287221	287718	151	+	.	.
scaffold591	subtractBed	intrn	287726	288232	.	-	.	Parent=CGI_10027562;
	scaffold591	WUBlastX	DNA_TcMar-Tc1	287726	288232	340	+	.	.
scaffold591	subtractBed	intrn	329355	330556	.	-	.	Parent=CGI_10027564;
	scaffold591	TRF	Tandem_Repeat	329355	330556	1668	+	.	.
scaffold591	subtractBed	intrn	506646	506678	.	-	.	Parent=CGI_10027572;
	scaffold591	TRF	Tandem_Repeat	506646	506678	66	+	.	.
scaffold591	subtractBed	intrn	515934	516068	.	-	.	Parent=CGI_10027572;
	scaffold591	TRF	Tandem_Repeat	515934	516068	169	+	.	.
scaffold591	subtractBed	intrn	517611	517635	.	-	.	Parent=CGI_10027572;
	scaffold591	TRF	Tandem_Repeat	517611	517635	50	+	.	.
scaffold591	subtractBed	intrn	516313	516534	.	-	.	Parent=CGI_10027572;
	scaffold591	WUBlastX	LINE_L1	516313	516534	40	+	.	.
scaffold591	subtractBed	intrn	516531	516875	.	-	.	Parent=CGI_10027572;
	scaffold591	WUBlastX	LINE_L1	516531	516875	75	+	.	.
scaffold591	subtractBed	intrn	516618	516878	.	-	.	Parent=CGI_10027572;
	scaffold591	WUBlastX	LINE_L1	516618	516878	85	+	.	.
scaffold591	subtractBed	intrn	586684	586839	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	DNA_Harbinger	586684	586839	30	+	.	.
scaffold591	subtractBed	intrn	590708	590745	.	+	.	Parent=CGI_10027576;
	scaffold591	TRF	Tandem_Repeat	590708	590745	76	+	.	.
scaffold591	subtractBed	intrn	605292	605340	.	+	.	Parent=CGI_10027576;
	scaffold591	TRF	Tandem_Repeat	605292	605340	98	+	.	.
scaffold591	subtractBed	intrn	602730	603485	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	602730	603485	120	-	.	.
scaffold591	subtractBed	intrn	600080	600889	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	600080	600889	307	-	.	.
scaffold591	subtractBed	intrn	601091	602518	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	601091	602518	831	-	.	.
scaffold591	subtractBed	intrn	602805	603299	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	602805	603299	144	-	.	.
scaffold591	subtractBed	intrn	600080	601042	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	600080	601042	260	-	.	.
scaffold591	subtractBed	intrn	602580	603263	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	602580	603263	20	-	.	.
scaffold591	subtractBed	intrn	600996	601085	.	+	.	Parent=CGI_10027576;
	scaffold591	WUBlastX	LTR_Ngaro	600996	601085	37	-	.	.
scaffold591	subtractBed	intrn	651556	651600	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	651556	651600	90	+	.	.
scaffold591	subtractBed	intrn	651872	652374	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	651872	652374	927	+	.	.
scaffold591	subtractBed	intrn	652694	652746	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	652694	652746	70	+	.	.
scaffold591	subtractBed	intrn	700496	700616	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	700496	700616	74	+	.	.
scaffold591	subtractBed	intrn	700504	700740	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	700504	700740	124	+	.	.
scaffold591	subtractBed	intrn	700916	700998	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	700916	700998	68	+	.	.
scaffold591	subtractBed	intrn	705807	705898	.	+	.	Parent=CGI_10027579;
	scaffold591	TRF	Tandem_Repeat	705807	705898	78	+	.	.
scaffold591	subtractBed	intrn	727314	727454	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	727314	727454	50	+	.	.
scaffold591	subtractBed	intrn	725353	725418	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	725353	725418	27	+	.	.
scaffold591	subtractBed	intrn	726768	726860	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	726768	726860	35	+	.	.
scaffold591	subtractBed	intrn	726146	726229	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	726146	726229	58	+	.	.
scaffold591	subtractBed	intrn	726146	726244	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	726146	726244	45	+	.	.
scaffold591	subtractBed	intrn	726237	726464	.	-	.	Parent=CGI_10027581;
	scaffold591	WUBlastX	DNA_PiggyBac	726237	726464	35	+	.	.
scaffold591	subtractBed	intrn	733170	733335	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	733170	733335	181	+	.	.
scaffold591	subtractBed	intrn	733218	733372	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	733218	733372	163	+	.	.
scaffold591	subtractBed	intrn	736671	736716	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	736671	736716	92	+	.	.
scaffold591	subtractBed	intrn	736960	737011	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	736960	737011	50	+	.	.
scaffold591	subtractBed	intrn	738370	738403	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	738370	738403	68	+	.	.
scaffold591	subtractBed	intrn	745991	746040	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	745991	746040	91	+	.	.
scaffold591	subtractBed	intrn	768036	768290	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	768036	768290	312	+	.	.
scaffold591	subtractBed	intrn	770461	770927	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	770461	770927	627	+	.	.
scaffold591	subtractBed	intrn	770462	770927	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	770462	770927	576	+	.	.
scaffold591	subtractBed	intrn	792707	792743	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	792707	792743	74	+	.	.
scaffold591	subtractBed	intrn	797334	797379	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	797334	797379	76	+	.	.
scaffold591	subtractBed	intrn	800606	800650	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	800606	800650	90	+	.	.
scaffold591	subtractBed	intrn	805910	805966	.	-	.	Parent=CGI_10027581;
	scaffold591	TRF	Tandem_Repeat	805910	805966	105	+	.	.
scaffold591	subtractBed	intrn	813371	813436	.	-	.	Parent=CGI_10027582;
	scaffold591	TRF	Tandem_Repeat	813371	813436	114	+	.	.
scaffold591	subtractBed	intrn	813885	813921	.	-	.	Parent=CGI_10027582;
	scaffold591	TRF	Tandem_Repeat	813885	813921	74	+	.	.
scaffold591	subtractBed	intrn	813919	813946	.	-	.	Parent=CGI_10027582;
	scaffold591	TRF	Tandem_Repeat	813919	813946	56	+	.	.
scaffold591	subtractBed	intrn	813885	813921	.	+	.	Parent=CGI_10027583;
	scaffold591	TRF	Tandem_Repeat	813885	813921	74	+	.	.
scaffold591	subtractBed	intrn	813919	813946	.	+	.	Parent=CGI_10027583;
	scaffold591	TRF	Tandem_Repeat	813919	813946	56	+	.	.
scaffold591	subtractBed	intrn	843203	843379	.	+	.	Parent=CGI_10027585;
	scaffold591	TRF	Tandem_Repeat	843203	843379	142	+	.	.
scaffold591	subtractBed	intrn	882526	882564	.	+	.	Parent=CGI_10027586;
	scaffold591	TRF	Tandem_Repeat	882526	882564	78	+	.	.
scaffold591	subtractBed	intrn	889187	889250	.	+	.	Parent=CGI_10027586;
	scaffold591	TRF	Tandem_Repeat	889187	889250	128	+	.	.
scaffold591	subtractBed	intrn	922909	924234	.	+	.	Parent=CGI_10027590;
	scaffold591	TRF	Tandem_Repeat	922909	924234	1404	+	.	.
scaffold591	subtractBed	intrn	929973	930069	.	+	.	Parent=CGI_10027590;
	scaffold591	TRF	Tandem_Repeat	929973	930069	79	+	.	.
scaffold591	subtractBed	intrn	1020659	1020744	.	+	.	Parent=CGI_10027596;
	scaffold591	TRF	Tandem_Repeat	1020659	1020744	165	+	.	.
scaffold591	subtractBed	intrn	1112954	1112992	.	-	.	Parent=CGI_10027598;
	scaffold591	TRF	Tandem_Repeat	1112954	1112992	78	+	.	.
scaffold591	subtractBed	intrn	1125533	1125605	.	-	.	Parent=CGI_10027599;
	scaffold591	TRF	Tandem_Repeat	1125533	1125605	146	+	.	.
scaffold591	subtractBed	intrn	1139738	1140166	.	+	.	Parent=CGI_10027600;
	scaffold591	TRF	Tandem_Repeat	1139738	1140166	675	+	.	.
scaffold591	subtractBed	intrn	1141288	1141335	.	+	.	Parent=CGI_10027600;
	scaffold591	TRF	Tandem_Repeat	1141288	1141335	80	+	.	.
scaffold591	subtractBed	intrn	1147271	1147698	.	+	.	Parent=CGI_10027601;
	scaffold591	TRF	Tandem_Repeat	1147271	1147698	283	+	.	.
scaffold591	subtractBed	intrn	1148623	1148706	.	+	.	Parent=CGI_10027601;
	scaffold591	TRF	Tandem_Repeat	1148623	1148706	71	+	.	.
scaffold591	subtractBed	intrn	1148623	1148769	.	+	.	Parent=CGI_10027601;
	scaffold591	TRF	Tandem_Repeat	1148623	1148769	114	+	.	.
scaffold591	subtractBed	intrn	1150300	1150355	.	+	.	Parent=CGI_10027601;
	scaffold591	TRF	Tandem_Repeat	1150300	1150355	112	+	.	.
scaffold591	subtractBed	intrn	1165036	1165388	.	+	.	Parent=CGI_10027603;
	scaffold591	TRF	Tandem_Repeat	1165036	1165388	609	+	.	.
scaffold591	subtractBed	intrn	1178177	1178223	.	-	.	Parent=CGI_10027605;
	scaffold591	TRF	Tandem_Repeat	1178177	1178223	94	+	.	.
scaffold591	subtractBed	intrn	1189850	1189917	.	-	.	Parent=CGI_10027607;
	scaffold591	TRF	Tandem_Repeat	1189850	1189917	136	+	.	.
scaffold591	subtractBed	intrn	1275932	1276095	.	-	.	Parent=CGI_10027615;
	scaffold591	TRF	Tandem_Repeat	1275932	1276095	175	+	.	.
scaffold591	subtractBed	intrn	1280476	1280507	.	-	.	Parent=CGI_10027615;
	scaffold591	TRF	Tandem_Repeat	1280476	1280507	64	+	.	.
scaffold591	subtractBed	intrn	1289822	1290127	.	-	.	Parent=CGI_10027616;
	scaffold591	WUBlastX	LINE_RTE-X	1289822	1290127	53	-	.	.
scaffold591	subtractBed	intrn	1350485	1350529	.	-	.	Parent=CGI_10027619;
	scaffold591	TRF	Tandem_Repeat	1350485	1350529	90	+	.	.
scaffold591	subtractBed	intrn	1363680	1363796	.	-	.	Parent=CGI_10027620;
	scaffold591	TRF	Tandem_Repeat	1363680	1363796	101	+	.	.
scaffold591	subtractBed	intrn	1364963	1365353	.	-	.	Parent=CGI_10027620;
	scaffold591	TRF	Tandem_Repeat	1364963	1365353	223	+	.	.
scaffold591	subtractBed	intrn	1365146	1365419	.	-	.	Parent=CGI_10027620;
	scaffold591	TRF	Tandem_Repeat	1365146	1365432	103	+	.	.
scaffold591	subtractBed	intrn	1390876	1391249	.	-	.	Parent=CGI_10027625;
	scaffold591	TRF	Tandem_Repeat	1390876	1391249	336	+	.	.
scaffold591	subtractBed	intrn	1406702	1406845	.	+	.	Parent=CGI_10027626;
	scaffold591	WUBlastX	LINE_RTE-X	1406702	1406845	32	+	.	.
scaffold591	subtractBed	intrn	1410154	1410218	.	+	.	Parent=CGI_10027626;
	scaffold591	TRF	Tandem_Repeat	1410154	1410218	112	+	.	.
scaffold592	subtractBed	intrn	14461	14495	.	+	.	Parent=CGI_10010700;
	scaffold592	TRF	Tandem_Repeat	14461	14495	70	+	.	.
scaffold592	subtractBed	intrn	18749	18908	.	+	.	Parent=CGI_10010700;
	scaffold592	WUBlastX	DNA_Academ	18749	18910	27	+	.	.
scaffold592	subtractBed	intrn	18815	18908	.	+	.	Parent=CGI_10010700;
	scaffold592	WUBlastX	DNA_Academ	18815	18910	38	+	.	.
scaffold592	subtractBed	intrn	19111	19206	.	+	.	Parent=CGI_10010700;
	scaffold592	WUBlastX	DNA_Academ	18912	19343	68	+	.	.
scaffold592	subtractBed	intrn	85371	85404	.	-	.	Parent=CGI_10010703;
	scaffold592	TRF	Tandem_Repeat	85371	85404	52	+	.	.
scaffold592	subtractBed	intrn	123893	123969	.	+	.	Parent=CGI_10010705;
	scaffold592	TRF	Tandem_Repeat	123893	123969	59	+	.	.
scaffold592	subtractBed	intrn	145645	145978	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	145645	145978	123	+	.	.
scaffold592	subtractBed	intrn	145665	145856	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	145665	145856	194	+	.	.
scaffold592	subtractBed	intrn	151247	151306	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	151247	151306	113	+	.	.
scaffold592	subtractBed	intrn	155385	155427	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	155385	155427	86	+	.	.
scaffold592	subtractBed	intrn	160206	160287	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	160206	160287	157	+	.	.
scaffold592	subtractBed	intrn	172147	172171	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	172147	172171	50	+	.	.
scaffold592	subtractBed	intrn	172382	172568	.	+	.	Parent=CGI_10010706;
	scaffold592	TRF	Tandem_Repeat	172382	172568	189	+	.	.
scaffold592	subtractBed	intrn	191884	191909	.	-	.	Parent=CGI_10010707;
	scaffold592	TRF	Tandem_Repeat	191884	191909	52	+	.	.
scaffold592	subtractBed	intrn	192651	192728	.	-	.	Parent=CGI_10010707;
	scaffold592	TRF	Tandem_Repeat	192651	192728	156	+	.	.
scaffold592	subtractBed	intrn	197958	197992	.	-	.	Parent=CGI_10010707;
	scaffold592	TRF	Tandem_Repeat	197958	197992	70	+	.	.
scaffold592	subtractBed	intrn	209991	210097	.	-	.	Parent=CGI_10010708;
	scaffold592	TRF	Tandem_Repeat	209991	210097	142	+	.	.
scaffold592	subtractBed	intrn	211705	211850	.	-	.	Parent=CGI_10010708;
	scaffold592	TRF	Tandem_Repeat	211705	211850	103	+	.	.
scaffold592	subtractBed	intrn	211760	211850	.	-	.	Parent=CGI_10010708;
	scaffold592	TRF	Tandem_Repeat	211760	211850	146	+	.	.
scaffold592	subtractBed	intrn	222272	222895	.	-	.	Parent=CGI_10010708;
	scaffold592	TRF	Tandem_Repeat	222272	222895	586	+	.	.
scaffold592	subtractBed	intrn	228786	229128	.	-	.	Parent=CGI_10010708;
	scaffold592	TRF	Tandem_Repeat	228786	229128	686	+	.	.
scaffold592	subtractBed	intrn	255208	255520	.	+	.	Parent=CGI_10010709;
	scaffold592	TRF	Tandem_Repeat	255208	255520	433	+	.	.
scaffold592	subtractBed	intrn	265480	265512	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	265480	265512	50	+	.	.
scaffold592	subtractBed	intrn	265636	265677	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	265636	265677	84	+	.	.
scaffold592	subtractBed	intrn	266280	266446	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	266280	266446	119	+	.	.
scaffold592	subtractBed	intrn	266313	266471	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	266313	266471	112	+	.	.
scaffold592	subtractBed	intrn	268358	268700	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	268358	268700	206	+	.	.
scaffold592	subtractBed	intrn	268358	268960	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	268358	268960	412	+	.	.
scaffold592	subtractBed	intrn	268358	268960	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	268358	268960	443	+	.	.
scaffold592	subtractBed	intrn	268403	268885	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	268403	268885	166	+	.	.
scaffold592	subtractBed	intrn	268738	268960	.	+	.	Parent=CGI_10010710;
	scaffold592	TRF	Tandem_Repeat	268738	268960	186	+	.	.
scaffold593	subtractBed	intrn	77110	77141	.	+	.	Parent=CGI_10022511;
	scaffold593	TRF	Tandem_Repeat	77110	77141	57	+	.	.
scaffold593	subtractBed	intrn	303303	303336	.	-	.	Parent=CGI_10022523;
	scaffold593	TRF	Tandem_Repeat	303303	303336	50	+	.	.
scaffold593	subtractBed	intrn	436518	436661	.	-	.	Parent=CGI_10022527;
	scaffold593	TRF	Tandem_Repeat	436518	436661	139	+	.	.
scaffold593	subtractBed	intrn	436518	436661	.	+	.	Parent=CGI_10022528;
	scaffold593	TRF	Tandem_Repeat	436518	436661	139	+	.	.
scaffold593	subtractBed	intrn	470574	470869	.	+	.	Parent=CGI_10022530;
	scaffold593	TRF	Tandem_Repeat	470574	470869	379	+	.	.
scaffold593	subtractBed	intrn	470680	470861	.	+	.	Parent=CGI_10022530;
	scaffold593	TRF	Tandem_Repeat	470680	470861	166	+	.	.
scaffold593	subtractBed	intrn	483483	483854	.	+	.	Parent=CGI_10022532;
	scaffold593	WUBlastX	LINE_RTE-BovB	483483	483854	54	-	.	.
scaffold593	subtractBed	intrn	484677	485102	.	+	.	Parent=CGI_10022532;
	scaffold593	WUBlastX	LINE_RTE-BovB	484677	485102	81	-	.	.
scaffold593	subtractBed	intrn	482720	482818	.	+	.	Parent=CGI_10022532;
	scaffold593	WUBlastX	LINE_RTE-BovB	482720	482818	20	-	.	.
scaffold593	subtractBed	intrn	483465	483647	.	+	.	Parent=CGI_10022532;
	scaffold593	WUBlastX	LINE_RTE-BovB	483465	483647	93	-	.	.
scaffold593	subtractBed	intrn	483435	483629	.	+	.	Parent=CGI_10022532;
	scaffold593	WUBlastX	LINE_RTE-BovB	483435	483629	58	-	.	.
scaffold593	subtractBed	intrn	493222	493290	.	+	.	Parent=CGI_10022532;
	scaffold593	TRF	Tandem_Repeat	493222	493290	59	+	.	.
scaffold593	subtractBed	intrn	496253	496319	.	+	.	Parent=CGI_10022532;
	scaffold593	TRF	Tandem_Repeat	496253	496319	80	+	.	.
scaffold593	subtractBed	intrn	496265	496315	.	+	.	Parent=CGI_10022532;
	scaffold593	TRF	Tandem_Repeat	496265	496315	84	+	.	.
scaffold593	subtractBed	intrn	491363	492110	.	+	.	Parent=CGI_10022532;
	scaffold593	TRF	Tandem_Repeat	491363	492110	946	+	.	.
scaffold593	subtractBed	intrn	601597	601687	.	+	.	Parent=CGI_10022535;
	scaffold593	TRF	Tandem_Repeat	601597	601687	83	+	.	.
scaffold593	subtractBed	intrn	671195	672177	.	+	.	Parent=CGI_10022536;
	scaffold593	TRF	Tandem_Repeat	671195	672177	646	+	.	.
scaffold593	subtractBed	intrn	671195	672184	.	+	.	Parent=CGI_10022536;
	scaffold593	TRF	Tandem_Repeat	671195	672184	809	+	.	.
scaffold593	subtractBed	intrn	675686	675724	.	+	.	Parent=CGI_10022536;
	scaffold593	TRF	Tandem_Repeat	675686	675724	51	+	.	.
scaffold593	subtractBed	intrn	726163	726455	.	-	.	Parent=CGI_10022539;
	scaffold593	WUBlastX	LINE_RTE-X	726163	727323	47	-	.	.
scaffold594	subtractBed	intrn	23117	23163	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	23117	23163	80	+	.	.
scaffold594	subtractBed	intrn	24688	24875	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	24688	24875	128	+	.	.
scaffold594	subtractBed	intrn	31997	32022	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	31997	32022	52	+	.	.
scaffold594	subtractBed	intrn	32258	32316	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	32258	32316	86	+	.	.
scaffold594	subtractBed	intrn	41544	41577	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	41544	41577	68	+	.	.
scaffold594	subtractBed	intrn	43894	43926	.	+	.	Parent=CGI_10016368;
	scaffold594	TRF	Tandem_Repeat	43894	43926	66	+	.	.
scaffold594	subtractBed	intrn	115584	115627	.	+	.	Parent=CGI_10016372;
	scaffold594	TRF	Tandem_Repeat	115584	115627	79	+	.	.
scaffold594	subtractBed	intrn	178108	178184	.	+	.	Parent=CGI_10016375;
	scaffold594	TRF	Tandem_Repeat	178108	178184	97	+	.	.
scaffold594	subtractBed	intrn	191723	191760	.	+	.	Parent=CGI_10016375;
	scaffold594	TRF	Tandem_Repeat	191723	191760	51	+	.	.
scaffold594	subtractBed	intrn	212772	212798	.	-	.	Parent=CGI_10016377;
	scaffold594	TRF	Tandem_Repeat	212772	212798	54	+	.	.
scaffold594	subtractBed	intrn	274116	274221	.	+	.	Parent=CGI_10016384;
	scaffold594	TRF	Tandem_Repeat	274116	274221	166	+	.	.
scaffold594	subtractBed	intrn	274116	274221	.	+	.	Parent=CGI_10016384;
	scaffold594	TRF	Tandem_Repeat	274116	274221	169	+	.	.
scaffold594	subtractBed	intrn	274937	275116	.	+	.	Parent=CGI_10016384;
	scaffold594	TRF	Tandem_Repeat	274937	275116	216	+	.	.
scaffold594	subtractBed	intrn	274937	275116	.	+	.	Parent=CGI_10016384;
	scaffold594	TRF	Tandem_Repeat	274937	275116	216	+	.	.
scaffold594	subtractBed	intrn	274938	275116	.	+	.	Parent=CGI_10016384;
	scaffold594	TRF	Tandem_Repeat	274938	275116	185	+	.	.
scaffold594	subtractBed	intrn	292354	292423	.	-	.	Parent=CGI_10016385;
	scaffold594	TRF	Tandem_Repeat	292354	292423	140	+	.	.
scaffold594	subtractBed	intrn	309909	309957	.	-	.	Parent=CGI_10016386;
	scaffold594	TRF	Tandem_Repeat	309909	309957	98	+	.	.
scaffold594	subtractBed	intrn	321521	321566	.	+	.	Parent=CGI_10016387;
	scaffold594	TRF	Tandem_Repeat	321521	321566	92	+	.	.
scaffold594	subtractBed	intrn	373131	373165	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	373131	373165	70	+	.	.
scaffold594	subtractBed	intrn	373231	373294	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	373231	373294	83	+	.	.
scaffold594	subtractBed	intrn	376956	376982	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	376956	376982	54	+	.	.
scaffold594	subtractBed	intrn	377026	377094	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	377026	377094	129	+	.	.
scaffold594	subtractBed	intrn	379314	379443	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	379314	379443	93	+	.	.
scaffold594	subtractBed	intrn	379359	379505	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	379359	379505	73	+	.	.
scaffold594	subtractBed	intrn	380470	381243	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	380470	381243	768	+	.	.
scaffold594	subtractBed	intrn	381289	381326	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	381289	381326	60	+	.	.
scaffold594	subtractBed	intrn	389509	389568	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	389509	389568	104	+	.	.
scaffold594	subtractBed	intrn	401512	401558	.	+	.	Parent=CGI_10016389;
	scaffold594	TRF	Tandem_Repeat	401512	401558	94	+	.	.
scaffold594	subtractBed	intrn	415841	415930	.	-	.	Parent=CGI_10016391;
	scaffold594	WUBlastX	LINE_RTE-X	415841	415930	21	-	.	.
scaffold594	subtractBed	intrn	420445	421569	.	+	.	Parent=CGI_10016392;
	scaffold594	TRF	Tandem_Repeat	420445	421569	1664	+	.	.
scaffold594	subtractBed	intrn	421600	421659	.	+	.	Parent=CGI_10016392;
	scaffold594	TRF	Tandem_Repeat	421600	421659	84	+	.	.
scaffold594	subtractBed	intrn	421596	421658	.	+	.	Parent=CGI_10016392;
	scaffold594	TRF	Tandem_Repeat	421596	421658	99	+	.	.
scaffold595	subtractBed	intrn	66630	66708	.	-	.	Parent=CGI_10005863;
	scaffold595	TRF	Tandem_Repeat	66630	66708	158	+	.	.
scaffold595	subtractBed	intrn	71490	71515	.	-	.	Parent=CGI_10005863;
	scaffold595	TRF	Tandem_Repeat	71490	71515	52	+	.	.
scaffold595	subtractBed	intrn	92576	93196	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	92576	93196	84	-	.	.
scaffold595	subtractBed	intrn	91762	92733	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	91762	92733	432	-	.	.
scaffold595	subtractBed	intrn	91780	92553	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	91780	92553	509	-	.	.
scaffold595	subtractBed	intrn	92576	93316	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	92576	93316	80	-	.	.
scaffold595	subtractBed	intrn	90722	90997	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	90722	90997	54	-	.	.
scaffold595	subtractBed	intrn	90081	90806	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	90081	90806	302	-	.	.
scaffold595	subtractBed	intrn	91263	91796	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	91263	91796	413	-	.	.
scaffold595	subtractBed	intrn	90988	91254	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LTR_Ngaro	90988	91254	170	-	.	.
scaffold595	subtractBed	intrn	86308	86574	.	-	.	Parent=CGI_10005863;
	scaffold595	WUBlastX	LINE_RTE-X	86308	86574	61	-	.	.
scaffold596	subtractBed	intrn	20615	20657	.	-	.	Parent=CGI_10009569;
	scaffold596	TRF	Tandem_Repeat	20615	20657	86	+	.	.
scaffold596	subtractBed	intrn	37808	37848	.	+	.	Parent=CGI_10009571;
	scaffold596	TRF	Tandem_Repeat	37808	37848	82	+	.	.
scaffold596	subtractBed	intrn	74334	74375	.	+	.	Parent=CGI_10009572;
	scaffold596	TRF	Tandem_Repeat	74334	74375	57	+	.	.
scaffold596	subtractBed	intrn	94754	95293	.	+	.	Parent=CGI_10009574;
	scaffold596	TRF	Tandem_Repeat	94754	95293	630	+	.	.
scaffold596	subtractBed	intrn	95968	97581	.	+	.	Parent=CGI_10009574;
	scaffold596	TRF	Tandem_Repeat	95968	97581	1763	+	.	.
scaffold596	subtractBed	intrn	130757	130819	.	+	.	Parent=CGI_10009575;
	scaffold596	TRF	Tandem_Repeat	130757	130819	81	+	.	.
scaffold596	subtractBed	intrn	140910	141025	.	+	.	Parent=CGI_10009575;
	scaffold596	TRF	Tandem_Repeat	140910	141025	56	+	.	.
scaffold596	subtractBed	intrn	140979	141025	.	+	.	Parent=CGI_10009575;
	scaffold596	TRF	Tandem_Repeat	140979	141025	58	+	.	.
scaffold596	subtractBed	intrn	144163	144199	.	+	.	Parent=CGI_10009575;
	scaffold596	TRF	Tandem_Repeat	144163	144199	56	+	.	.
scaffold596	subtractBed	intrn	145183	145934	.	+	.	Parent=CGI_10009575;
	scaffold596	TRF	Tandem_Repeat	145183	145934	1328	+	.	.
scaffold596	subtractBed	intrn	195556	195774	.	-	.	Parent=CGI_10009577;
	scaffold596	WUBlastX	RC_Helitron	195556	195774	95	-	.	.
scaffold596	subtractBed	intrn	209902	210126	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	LTR_Gypsy	209902	210126	88	+	.	.
scaffold596	subtractBed	intrn	209983	210147	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	LTR_Gypsy	209983	210147	100	+	.	.
scaffold596	subtractBed	intrn	210129	210215	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	LTR_Gypsy	210129	210215	36	+	.	.
scaffold596	subtractBed	intrn	217956	217981	.	+	.	Parent=CGI_10009578;
	scaffold596	TRF	Tandem_Repeat	217956	217981	52	+	.	.
scaffold596	subtractBed	intrn	217981	218032	.	+	.	Parent=CGI_10009578;
	scaffold596	TRF	Tandem_Repeat	217981	218032	104	+	.	.
scaffold596	subtractBed	intrn	213673	213777	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	DNA_TcMar-Tc1	213673	213777	68	-	.	.
scaffold596	subtractBed	intrn	213833	214309	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	DNA_TcMar-Tc1	213833	214309	200	-	.	.
scaffold596	subtractBed	intrn	213767	214351	.	+	.	Parent=CGI_10009578;
	scaffold596	WUBlastX	DNA_TcMar-Tc1	213767	214351	156	-	.	.
scaffold597	subtractBed	intrn	32292	32320	.	+	.	Parent=CGI_10004927;
	scaffold597	TRF	Tandem_Repeat	32292	32320	58	+	.	.
scaffold597	subtractBed	intrn	33219	33508	.	+	.	Parent=CGI_10004927;
	scaffold597	TRF	Tandem_Repeat	33219	33508	449	+	.	.
scaffold597	subtractBed	intrn	33224	33508	.	+	.	Parent=CGI_10004927;
	scaffold597	TRF	Tandem_Repeat	33224	33508	439	+	.	.
scaffold597	subtractBed	intrn	35928	36797	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_I	35928	36797	89	-	.	.
scaffold597	subtractBed	intrn	37616	38485	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_I	37616	38485	89	-	.	.
scaffold597	subtractBed	intrn	37004	37168	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_CR1	37004	37168	31	-	.	.
scaffold597	subtractBed	intrn	35106	35339	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-BovB	35106	35339	37	-	.	.
scaffold597	subtractBed	intrn	35928	36509	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_L1-Tx1	35928	36509	119	-	.	.
scaffold597	subtractBed	intrn	35928	36401	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-X	35928	36401	143	-	.	.
scaffold597	subtractBed	intrn	35928	36239	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-RTE	35928	36239	163	-	.	.
scaffold597	subtractBed	intrn	37616	37927	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-RTE	37616	37927	163	-	.	.
scaffold597	subtractBed	intrn	35579	35911	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_CR1	35579	35911	109	-	.	.
scaffold597	subtractBed	intrn	37267	37599	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_CR1	37267	37599	109	-	.	.
scaffold597	subtractBed	intrn	37616	38089	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-X	37616	38089	143	-	.	.
scaffold597	subtractBed	intrn	35513	35911	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_CR1	35513	35911	77	-	.	.
scaffold597	subtractBed	intrn	37201	37599	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_CR1	37201	37599	77	-	.	.
scaffold597	subtractBed	intrn	37616	38197	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_L1-Tx1	37616	38197	119	-	.	.
scaffold597	subtractBed	intrn	35079	35504	.	+	.	Parent=CGI_10004927;
	scaffold597	WUBlastX	LINE_RTE-X	35079	35504	20	-	.	.
scaffold597	subtractBed	intrn	62122	62345	.	+	.	Parent=CGI_10004929;
	scaffold597	TRF	Tandem_Repeat	62122	62345	340	+	.	.
scaffold597	subtractBed	intrn	66638	66743	.	+	.	Parent=CGI_10004929;
	scaffold597	TRF	Tandem_Repeat	66638	66743	114	+	.	.
scaffold597	subtractBed	intrn	67101	67133	.	+	.	Parent=CGI_10004929;
	scaffold597	TRF	Tandem_Repeat	67101	67133	66	+	.	.
scaffold597	subtractBed	intrn	72908	72968	.	+	.	Parent=CGI_10004929;
	scaffold597	TRF	Tandem_Repeat	72908	72968	122	+	.	.
scaffold597	subtractBed	intrn	73659	73797	.	+	.	Parent=CGI_10004929;
	scaffold597	TRF	Tandem_Repeat	73659	73797	253	+	.	.
scaffold597	subtractBed	intrn	80412	80453	.	-	.	Parent=CGI_10004930;
	scaffold597	WUBlastX	LINE_L1	80379	80453	26	+	.	.
scaffold597	subtractBed	intrn	81083	81535	.	-	.	Parent=CGI_10004930;
	scaffold597	WUBlastX	LINE_L1-Tx1	81083	81535	244	+	.	.
scaffold597	subtractBed	intrn	81547	82131	.	-	.	Parent=CGI_10004930;
	scaffold597	WUBlastX	LINE_L1-Tx1	81547	82131	117	+	.	.
scaffold597	subtractBed	intrn	87302	87343	.	-	.	Parent=CGI_10004930;
	scaffold597	TRF	Tandem_Repeat	87302	87343	84	+	.	.
scaffold598	subtractBed	intrn	1349	2302	.	+	.	Parent=CGI_10001778;
	scaffold598	WUBlastX	LTR_Gypsy	1349	2302	41	+	.	.
scaffold598	subtractBed	intrn	1493	3094	.	+	.	Parent=CGI_10001778;
	scaffold598	WUBlastX	LTR_Ngaro	1493	3094	1034	+	.	.
scaffold598	subtractBed	intrn	3064	3966	.	+	.	Parent=CGI_10001778;
	scaffold598	WUBlastX	LTR_Ngaro	3064	3966	416	+	.	.
scaffold599	subtractBed	intrn	32261	32392	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32261	32392	110	-	.	.
scaffold599	subtractBed	intrn	30712	30822	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Pao	30712	30822	20	+	.	.
scaffold599	subtractBed	intrn	30411	30674	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Pao	30411	30674	30	+	.	.
scaffold599	subtractBed	intrn	32397	32705	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32397	32705	199	-	.	.
scaffold599	subtractBed	intrn	31237	31500	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Pao	31237	31500	167	+	.	.
scaffold599	subtractBed	intrn	29982	30164	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Pao	29982	30164	25	+	.	.
scaffold599	subtractBed	intrn	32195	32395	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32195	32395	104	-	.	.
scaffold599	subtractBed	intrn	32976	33368	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32976	33368	100	-	.	.
scaffold599	subtractBed	intrn	32970	33563	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32970	33563	50	-	.	.
scaffold599	subtractBed	intrn	32397	32864	.	+	.	Parent=CGI_10021706;
	scaffold599	WUBlastX	LTR_Ngaro	32397	32864	162	-	.	.
scaffold599	subtractBed	intrn	199042	199085	.	-	.	Parent=CGI_10021711;
	scaffold599	TRF	Tandem_Repeat	199042	199085	74	+	.	.
scaffold599	subtractBed	intrn	252056	252113	.	-	.	Parent=CGI_10021712;
	scaffold599	TRF	Tandem_Repeat	252056	252113	98	+	.	.
scaffold599	subtractBed	intrn	252056	252113	.	+	.	Parent=CGI_10021713;
	scaffold599	TRF	Tandem_Repeat	252056	252113	98	+	.	.
scaffold599	subtractBed	intrn	265862	265888	.	+	.	Parent=CGI_10021713;
	scaffold599	TRF	Tandem_Repeat	265862	265888	54	+	.	.
scaffold599	subtractBed	intrn	266735	266762	.	+	.	Parent=CGI_10021713;
	scaffold599	TRF	Tandem_Repeat	266735	266762	56	+	.	.
scaffold599	subtractBed	intrn	292563	292724	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_RTE-X	292563	292724	27	+	.	.
scaffold599	subtractBed	intrn	292662	292724	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_RTE-X	292662	292724	37	+	.	.
scaffold599	subtractBed	intrn	293716	293817	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_RTE-X	293716	293817	61	+	.	.
scaffold599	subtractBed	intrn	305987	306033	.	-	.	Parent=CGI_10021714;
	scaffold599	TRF	Tandem_Repeat	305987	306033	94	+	.	.
scaffold599	subtractBed	intrn	316787	317248	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_L1-Tx1	316787	317248	37	+	.	.
scaffold599	subtractBed	intrn	316976	317296	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_L1-Tx1	316976	317296	77	+	.	.
scaffold599	subtractBed	intrn	316976	317398	.	-	.	Parent=CGI_10021714;
	scaffold599	WUBlastX	LINE_L1-Tx1	316976	317398	51	+	.	.
scaffold599	subtractBed	intrn	333128	333154	.	-	.	Parent=CGI_10021714;
	scaffold599	TRF	Tandem_Repeat	333128	333154	54	+	.	.
scaffold599	subtractBed	intrn	345975	346214	.	-	.	Parent=CGI_10021715;
	scaffold599	TRF	Tandem_Repeat	345975	346214	257	+	.	.
scaffold599	subtractBed	intrn	349307	349338	.	-	.	Parent=CGI_10021715;
	scaffold599	TRF	Tandem_Repeat	349307	349338	64	+	.	.
scaffold599	subtractBed	intrn	364631	364657	.	+	.	Parent=CGI_10021716;
	scaffold599	TRF	Tandem_Repeat	364631	364657	54	+	.	.
scaffold599	subtractBed	intrn	375396	375824	.	-	.	Parent=CGI_10021718;
	scaffold599	WUBlastX	LINE_RTE-X	375396	375824	103	-	.	.
scaffold599	subtractBed	intrn	375462	375719	.	-	.	Parent=CGI_10021718;
	scaffold599	WUBlastX	LINE_RTE-X	375462	375719	166	-	.	.
scaffold599	subtractBed	intrn	375339	375722	.	-	.	Parent=CGI_10021718;
	scaffold599	WUBlastX	LINE_RTE-X	375339	375722	128	-	.	.
scaffold599	subtractBed	intrn	384320	384349	.	+	.	Parent=CGI_10021719;
	scaffold599	TRF	Tandem_Repeat	384320	384349	60	+	.	.
scaffold599	subtractBed	intrn	384349	384393	.	+	.	Parent=CGI_10021719;
	scaffold599	TRF	Tandem_Repeat	384349	384393	65	+	.	.
scaffold599	subtractBed	intrn	386185	386233	.	+	.	Parent=CGI_10021719;
	scaffold599	TRF	Tandem_Repeat	386185	386233	98	+	.	.
scaffold599	subtractBed	intrn	389094	389124	.	+	.	Parent=CGI_10021719;
	scaffold599	TRF	Tandem_Repeat	389094	389124	62	+	.	.
scaffold599	subtractBed	intrn	389378	389421	.	+	.	Parent=CGI_10021719;
	scaffold599	TRF	Tandem_Repeat	389378	389421	88	+	.	.
scaffold599	subtractBed	intrn	395167	395218	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	395167	395218	104	+	.	.
scaffold599	subtractBed	intrn	397682	397724	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	397682	397724	86	+	.	.
scaffold599	subtractBed	intrn	400725	401683	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	400725	401683	944	+	.	.
scaffold599	subtractBed	intrn	400728	401683	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	400728	401683	1129	+	.	.
scaffold599	subtractBed	intrn	400882	401787	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	400882	401787	723	+	.	.
scaffold599	subtractBed	intrn	402012	403851	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	402012	403851	2430	+	.	.
scaffold599	subtractBed	intrn	406645	406741	.	+	.	Parent=CGI_10021720;
	scaffold599	TRF	Tandem_Repeat	406645	406741	87	+	.	.
scaffold599	subtractBed	intrn	411329	411376	.	+	.	Parent=CGI_10021721;
	scaffold599	TRF	Tandem_Repeat	411329	411376	96	+	.	.
scaffold599	subtractBed	intrn	439970	440015	.	+	.	Parent=CGI_10021724;
	scaffold599	TRF	Tandem_Repeat	439970	440015	92	+	.	.
scaffold599	subtractBed	intrn	440013	440044	.	+	.	Parent=CGI_10021724;
	scaffold599	TRF	Tandem_Repeat	440013	440044	64	+	.	.
scaffold599	subtractBed	intrn	441200	441241	.	+	.	Parent=CGI_10021724;
	scaffold599	TRF	Tandem_Repeat	441200	441241	75	+	.	.
scaffold599	subtractBed	intrn	441946	441980	.	+	.	Parent=CGI_10021724;
	scaffold599	TRF	Tandem_Repeat	441946	441980	70	+	.	.
scaffold599	subtractBed	intrn	449216	449691	.	+	.	Parent=CGI_10021724;
	scaffold599	TRF	Tandem_Repeat	449216	449725	569	+	.	.
scaffold599	subtractBed	intrn	454162	454204	.	-	.	Parent=CGI_10021725;
	scaffold599	TRF	Tandem_Repeat	454162	454204	86	+	.	.
scaffold599	subtractBed	intrn	462365	462435	.	-	.	Parent=CGI_10021725;
	scaffold599	TRF	Tandem_Repeat	462365	462435	117	+	.	.
scaffold599	subtractBed	intrn	463751	463788	.	-	.	Parent=CGI_10021725;
	scaffold599	TRF	Tandem_Repeat	463751	463788	60	+	.	.
scaffold599	subtractBed	intrn	464556	464714	.	-	.	Parent=CGI_10021725;
	scaffold599	WUBlastX	DNA_IS4EU	464556	464714	31	+	.	.
scaffold599	subtractBed	intrn	463931	464197	.	-	.	Parent=CGI_10021725;
	scaffold599	WUBlastX	DNA_IS4EU	463931	464197	64	+	.	.
scaffold599	subtractBed	intrn	468832	469437	.	-	.	Parent=CGI_10021725;
	scaffold599	WUBlastX	DNA_IS4EU	468832	469437	232	+	.	.
scaffold599	subtractBed	intrn	465379	466440	.	-	.	Parent=CGI_10021725;
	scaffold599	WUBlastX	DNA_IS4EU	465379	466440	394	-	.	.
scaffold599	subtractBed	intrn	467549	468610	.	-	.	Parent=CGI_10021725;
	scaffold599	WUBlastX	DNA_IS4EU	467549	468610	394	-	.	.
scaffold599	subtractBed	intrn	462365	462435	.	+	.	Parent=CGI_10021726;
	scaffold599	TRF	Tandem_Repeat	462365	462435	117	+	.	.
scaffold599	subtractBed	intrn	463751	463788	.	+	.	Parent=CGI_10021726;
	scaffold599	TRF	Tandem_Repeat	463751	463788	60	+	.	.
scaffold599	subtractBed	intrn	464556	464714	.	+	.	Parent=CGI_10021726;
	scaffold599	WUBlastX	DNA_IS4EU	464556	464714	31	+	.	.
scaffold599	subtractBed	intrn	463931	464197	.	+	.	Parent=CGI_10021726;
	scaffold599	WUBlastX	DNA_IS4EU	463931	464197	64	+	.	.
scaffold599	subtractBed	intrn	468832	469437	.	+	.	Parent=CGI_10021726;
	scaffold599	WUBlastX	DNA_IS4EU	468832	469437	232	+	.	.
scaffold599	subtractBed	intrn	465379	466440	.	+	.	Parent=CGI_10021726;
	scaffold599	WUBlastX	DNA_IS4EU	465379	466440	394	-	.	.
scaffold599	subtractBed	intrn	467549	468610	.	+	.	Parent=CGI_10021726;
	scaffold599	WUBlastX	DNA_IS4EU	467549	468610	394	-	.	.
scaffold599	subtractBed	intrn	472486	473240	.	+	.	Parent=CGI_10021726;
	scaffold599	TRF	Tandem_Repeat	472486	473240	960	+	.	.
scaffold599	subtractBed	intrn	474201	474325	.	+	.	Parent=CGI_10021726;
	scaffold599	TRF	Tandem_Repeat	474201	474325	74	+	.	.
scaffold599	subtractBed	intrn	479931	481550	.	-	.	Parent=CGI_10021727;
	scaffold599	WUBlastX	RC_Helitron	479931	481550	789	-	.	.
scaffold599	subtractBed	intrn	479820	480479	.	-	.	Parent=CGI_10021727;
	scaffold599	WUBlastX	LINE_L2	479820	480479	33	-	.	.
scaffold599	subtractBed	intrn	483697	484017	.	-	.	Parent=CGI_10021727;
	scaffold599	WUBlastX	DNA_Kolobok	483697	484017	85	-	.	.
scaffold599	subtractBed	intrn	486782	486840	.	-	.	Parent=CGI_10021727;
	scaffold599	TRF	Tandem_Repeat	486782	486840	118	+	.	.
scaffold599	subtractBed	intrn	487187	487219	.	-	.	Parent=CGI_10021727;
	scaffold599	TRF	Tandem_Repeat	487187	487219	66	+	.	.
scaffold599	subtractBed	intrn	483697	484017	.	+	.	Parent=CGI_10021728;
	scaffold599	WUBlastX	DNA_Kolobok	483697	484017	85	-	.	.
scaffold599	subtractBed	intrn	492925	492959	.	+	.	Parent=CGI_10021729;
	scaffold599	TRF	Tandem_Repeat	492925	492959	52	+	.	.
scaffold599	subtractBed	intrn	492920	492972	.	+	.	Parent=CGI_10021729;
	scaffold599	TRF	Tandem_Repeat	492920	492972	61	+	.	.
scaffold599	subtractBed	intrn	492937	492972	.	+	.	Parent=CGI_10021729;
	scaffold599	TRF	Tandem_Repeat	492937	492972	54	+	.	.
scaffold599	subtractBed	intrn	493595	493655	.	+	.	Parent=CGI_10021729;
	scaffold599	TRF	Tandem_Repeat	493595	493655	122	+	.	.
scaffold599	subtractBed	intrn	513479	513526	.	-	.	Parent=CGI_10021731;
	scaffold599	TRF	Tandem_Repeat	513479	513526	80	+	.	.
scaffold599	subtractBed	intrn	513479	513526	.	+	.	Parent=CGI_10021732;
	scaffold599	TRF	Tandem_Repeat	513479	513526	80	+	.	.
scaffold599	subtractBed	intrn	515777	515864	.	+	.	Parent=CGI_10021732;
	scaffold599	TRF	Tandem_Repeat	515777	515864	167	+	.	.
scaffold599	subtractBed	intrn	531477	531542	.	-	.	Parent=CGI_10021733;
	scaffold599	TRF	Tandem_Repeat	531477	531542	125	+	.	.
scaffold6	subtractBed	intrn	123654	123704	.	-	.	Parent=CGI_10022297;
	scaffold6	TRF	Tandem_Repeat	123654	123704	102	+	.	.
scaffold6	subtractBed	intrn	126541	127434	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	126541	127434	482	+	.	.
scaffold6	subtractBed	intrn	128628	128786	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	128628	128786	47	+	.	.
scaffold6	subtractBed	intrn	129567	130256	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	129567	130256	241	+	.	.
scaffold6	subtractBed	intrn	126238	127434	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	126238	127434	474	+	.	.
scaffold6	subtractBed	intrn	121744	122133	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LINE_Penelope	121744	122133	24	+	.	.
scaffold6	subtractBed	intrn	125742	126248	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	125742	126248	37	+	.	.
scaffold6	subtractBed	intrn	121556	121660	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LINE_Penelope	121556	121660	29	+	.	.
scaffold6	subtractBed	intrn	129547	129606	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	129547	129606	20	+	.	.
scaffold6	subtractBed	intrn	129672	130253	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	129672	130253	467	+	.	.
scaffold6	subtractBed	intrn	128783	129556	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	128783	129556	549	+	.	.
scaffold6	subtractBed	intrn	127458	128726	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	127458	128726	998	+	.	.
scaffold6	subtractBed	intrn	130255	130353	.	-	.	Parent=CGI_10022297;
	scaffold6	WUBlastX	LTR_Pao	130255	130353	65	+	.	.
scaffold6	subtractBed	intrn	135458	135504	.	-	.	Parent=CGI_10022297;
	scaffold6	TRF	Tandem_Repeat	135458	135504	94	+	.	.
scaffold6	subtractBed	intrn	139853	139877	.	-	.	Parent=CGI_10022297;
	scaffold6	TRF	Tandem_Repeat	139853	139877	50	+	.	.
scaffold6	subtractBed	intrn	140694	140749	.	-	.	Parent=CGI_10022297;
	scaffold6	TRF	Tandem_Repeat	140694	140749	112	+	.	.
scaffold6	subtractBed	intrn	159779	159914	.	-	.	Parent=CGI_10022298;
	scaffold6	TRF	Tandem_Repeat	159779	159914	103	+	.	.
scaffold6	subtractBed	intrn	160253	160292	.	-	.	Parent=CGI_10022298;
	scaffold6	TRF	Tandem_Repeat	160253	160292	80	+	.	.
scaffold6	subtractBed	intrn	172472	172541	.	-	.	Parent=CGI_10022299;
	scaffold6	TRF	Tandem_Repeat	172472	172541	122	+	.	.
scaffold6	subtractBed	intrn	189905	189940	.	-	.	Parent=CGI_10022300;
	scaffold6	TRF	Tandem_Repeat	189905	189940	72	+	.	.
scaffold6	subtractBed	intrn	187315	188343	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1	187315	188343	365	+	.	.
scaffold6	subtractBed	intrn	189389	189721	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	189389	189721	53	+	.	.
scaffold6	subtractBed	intrn	186872	187324	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1	186872	187324	101	+	.	.
scaffold6	subtractBed	intrn	188393	189628	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	188393	189628	134	+	.	.
scaffold6	subtractBed	intrn	187609	188388	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	187609	188388	597	+	.	.
scaffold6	subtractBed	intrn	188411	189070	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	188411	189070	200	+	.	.
scaffold6	subtractBed	intrn	186953	187312	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	186953	187312	189	+	.	.
scaffold6	subtractBed	intrn	194063	194113	.	-	.	Parent=CGI_10022300;
	scaffold6	TRF	Tandem_Repeat	194063	194113	102	+	.	.
scaffold6	subtractBed	intrn	195960	195997	.	-	.	Parent=CGI_10022300;
	scaffold6	TRF	Tandem_Repeat	195960	195997	53	+	.	.
scaffold6	subtractBed	intrn	199540	200214	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	199540	200214	148	+	.	.
scaffold6	subtractBed	intrn	199292	199483	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	199292	199483	31	+	.	.
scaffold6	subtractBed	intrn	197556	197735	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	197556	197735	66	+	.	.
scaffold6	subtractBed	intrn	197725	198762	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	197725	198762	251	+	.	.
scaffold6	subtractBed	intrn	198954	199322	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	198954	199322	74	+	.	.
scaffold6	subtractBed	intrn	199415	199501	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	199415	199501	23	+	.	.
scaffold6	subtractBed	intrn	198409	198924	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	198409	198924	155	+	.	.
scaffold6	subtractBed	intrn	198936	199016	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	198936	199016	32	+	.	.
scaffold6	subtractBed	intrn	199909	200280	.	-	.	Parent=CGI_10022300;
	scaffold6	WUBlastX	LINE_L1-Tx1	199909	200280	21	+	.	.
scaffold6	subtractBed	intrn	217621	217927	.	-	.	Parent=CGI_10022301;
	scaffold6	TRF	Tandem_Repeat	217621	217927	436	+	.	.
scaffold6	subtractBed	intrn	285500	286292	.	+	.	Parent=CGI_10022309;
	scaffold6	TRF	Tandem_Repeat	285500	286292	1155	+	.	.
scaffold6	subtractBed	intrn	302131	302651	.	-	.	Parent=CGI_10022310;
	scaffold6	TRF	Tandem_Repeat	302131	302651	641	+	.	.
scaffold6	subtractBed	intrn	314556	314852	.	-	.	Parent=CGI_10022310;
	scaffold6	TRF	Tandem_Repeat	314556	314858	370	+	.	.
scaffold6	subtractBed	intrn	328056	328090	.	-	.	Parent=CGI_10022311;
	scaffold6	TRF	Tandem_Repeat	328056	328090	54	+	.	.
scaffold6	subtractBed	intrn	328068	328101	.	-	.	Parent=CGI_10022311;
	scaffold6	TRF	Tandem_Repeat	328068	328101	50	+	.	.
scaffold6	subtractBed	intrn	335035	335079	.	-	.	Parent=CGI_10022311;
	scaffold6	TRF	Tandem_Repeat	335035	335079	72	+	.	.
scaffold6	subtractBed	intrn	328056	328090	.	+	.	Parent=CGI_10022312;
	scaffold6	TRF	Tandem_Repeat	328056	328090	54	+	.	.
scaffold6	subtractBed	intrn	328068	328101	.	+	.	Parent=CGI_10022312;
	scaffold6	TRF	Tandem_Repeat	328068	328101	50	+	.	.
scaffold6	subtractBed	intrn	376255	376361	.	+	.	Parent=CGI_10022315;
	scaffold6	TRF	Tandem_Repeat	376255	376361	196	+	.	.
scaffold6	subtractBed	intrn	381359	382269	.	+	.	Parent=CGI_10022315;
	scaffold6	TRF	Tandem_Repeat	381359	382269	900	+	.	.
scaffold6	subtractBed	intrn	419363	419858	.	+	.	Parent=CGI_10022318;
	scaffold6	TRF	Tandem_Repeat	419363	419858	574	+	.	.
scaffold6	subtractBed	intrn	419354	419858	.	+	.	Parent=CGI_10022318;
	scaffold6	TRF	Tandem_Repeat	419354	419858	659	+	.	.
scaffold6	subtractBed	intrn	484712	484780	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	484712	484780	138	+	.	.
scaffold6	subtractBed	intrn	486028	486518	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	486028	486518	712	+	.	.
scaffold6	subtractBed	intrn	486028	487102	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	486028	487102	1296	+	.	.
scaffold6	subtractBed	intrn	486530	486888	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	486530	486888	531	+	.	.
scaffold6	subtractBed	intrn	493174	493762	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	493174	493762	764	+	.	.
scaffold6	subtractBed	intrn	495132	495203	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	495132	495203	112	+	.	.
scaffold6	subtractBed	intrn	497500	497530	.	+	.	Parent=CGI_10022322;
	scaffold6	TRF	Tandem_Repeat	497500	497530	62	+	.	.
scaffold6	subtractBed	intrn	503386	503948	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	503386	503948	341	+	.	.
scaffold6	subtractBed	intrn	503362	504320	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	503362	504320	467	+	.	.
scaffold6	subtractBed	intrn	503962	504239	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	503962	504239	142	+	.	.
scaffold6	subtractBed	intrn	510366	510876	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510366	510876	303	+	.	.
scaffold6	subtractBed	intrn	510351	511147	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510351	511147	370	+	.	.
scaffold6	subtractBed	intrn	510365	511132	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510365	511132	535	+	.	.
scaffold6	subtractBed	intrn	510903	511147	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510903	511147	174	+	.	.
scaffold6	subtractBed	intrn	510672	511225	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510672	511225	391	+	.	.
scaffold6	subtractBed	intrn	510960	511225	.	-	.	Parent=CGI_10022323;
	scaffold6	TRF	Tandem_Repeat	510960	511225	132	+	.	.
scaffold6	subtractBed	intrn	543173	543291	.	-	.	Parent=CGI_10022324;
	scaffold6	TRF	Tandem_Repeat	543173	543291	211	+	.	.
scaffold6	subtractBed	intrn	543428	543499	.	-	.	Parent=CGI_10022324;
	scaffold6	TRF	Tandem_Repeat	543428	543499	117	+	.	.
scaffold6	subtractBed	intrn	582182	582228	.	-	.	Parent=CGI_10022327;
	scaffold6	TRF	Tandem_Repeat	582182	582228	55	+	.	.
scaffold6	subtractBed	intrn	582475	582654	.	-	.	Parent=CGI_10022327;
	scaffold6	TRF	Tandem_Repeat	582475	582654	100	+	.	.
scaffold6	subtractBed	intrn	582503	582690	.	-	.	Parent=CGI_10022327;
	scaffold6	TRF	Tandem_Repeat	582503	582690	156	+	.	.
scaffold6	subtractBed	intrn	605111	606113	.	-	.	Parent=CGI_10022329;
	scaffold6	TRF	Tandem_Repeat	605111	606113	1555	+	.	.
scaffold6	subtractBed	intrn	610558	610582	.	-	.	Parent=CGI_10022329;
	scaffold6	TRF	Tandem_Repeat	610558	610582	50	+	.	.
scaffold6	subtractBed	intrn	611426	611428	.	-	.	Parent=CGI_10022329;
	scaffold6	WUBlastX	DNA_Harbinger	611426	611563	89	-	.	.
scaffold6	subtractBed	intrn	611426	611428	.	-	.	Parent=CGI_10022329;
	scaffold6	WUBlastX	DNA_Harbinger	611426	611722	67	-	.	.
scaffold6	subtractBed	intrn	611593	611722	.	-	.	Parent=CGI_10022329;
	scaffold6	WUBlastX	DNA_Harbinger	611426	611722	67	-	.	.
scaffold6	subtractBed	intrn	613618	613668	.	-	.	Parent=CGI_10022330;
	scaffold6	TRF	Tandem_Repeat	613618	613668	77	+	.	.
scaffold6	subtractBed	intrn	613607	613661	.	-	.	Parent=CGI_10022330;
	scaffold6	TRF	Tandem_Repeat	613607	613661	92	+	.	.
scaffold6	subtractBed	intrn	613610	613667	.	-	.	Parent=CGI_10022330;
	scaffold6	TRF	Tandem_Repeat	613610	613667	55	+	.	.
scaffold6	subtractBed	intrn	613670	613783	.	-	.	Parent=CGI_10022330;
	scaffold6	WUBlastX	DNA_Sola	613670	613783	32	-	.	.
scaffold6	subtractBed	intrn	613747	615075	.	-	.	Parent=CGI_10022330;
	scaffold6	WUBlastX	DNA_Sola	613747	615075	614	-	.	.
scaffold6	subtractBed	intrn	613721	613783	.	-	.	Parent=CGI_10022330;
	scaffold6	WUBlastX	DNA_Sola	613721	613783	44	-	.	.
scaffold6	subtractBed	intrn	673294	673500	.	+	.	Parent=CGI_10022331;
	scaffold6	WUBlastX	LINE_CR1	673294	673500	72	-	.	.
scaffold6	subtractBed	intrn	673294	673617	.	+	.	Parent=CGI_10022331;
	scaffold6	WUBlastX	LINE_CR1-L2	673294	673617	59	-	.	.
scaffold6	subtractBed	intrn	672558	673292	.	+	.	Parent=CGI_10022331;
	scaffold6	WUBlastX	LINE_L2	672558	673292	535	-	.	.
scaffold6	subtractBed	intrn	673318	673728	.	+	.	Parent=CGI_10022331;
	scaffold6	WUBlastX	LINE_CR1-L2	673318	673728	54	-	.	.
scaffold6	subtractBed	intrn	671555	672604	.	+	.	Parent=CGI_10022331;
	scaffold6	WUBlastX	LINE_L2	671555	672604	463	-	.	.
scaffold6	subtractBed	intrn	695516	695546	.	+	.	Parent=CGI_10022333;
	scaffold6	TRF	Tandem_Repeat	695516	695546	62	+	.	.
scaffold6	subtractBed	intrn	697692	697757	.	+	.	Parent=CGI_10022333;
	scaffold6	TRF	Tandem_Repeat	697692	697757	123	+	.	.
scaffold6	subtractBed	intrn	703263	703299	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	703263	703299	74	+	.	.
scaffold6	subtractBed	intrn	703328	703391	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	703328	703391	119	+	.	.
scaffold6	subtractBed	intrn	703407	703420	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_Harbinger	703407	703607	78	+	.	.
scaffold6	subtractBed	intrn	702150	702150	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_Harbinger	701998	702150	51	+	.	.
scaffold6	subtractBed	intrn	703593	703607	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_Harbinger	703407	703607	78	+	.	.
scaffold6	subtractBed	intrn	706691	706756	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	706691	706756	116	+	.	.
scaffold6	subtractBed	intrn	706692	706753	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	706692	706753	72	+	.	.
scaffold6	subtractBed	intrn	714695	714790	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_IS4EU	714695	714838	51	-	.	.
scaffold6	subtractBed	intrn	714849	714950	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_IS4EU	714849	714950	58	-	.	.
scaffold6	subtractBed	intrn	721132	722031	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_hAT-Tip100	721132	722031	282	+	.	.
scaffold6	subtractBed	intrn	722186	722314	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_hAT-Tip100	722186	722314	57	+	.	.
scaffold6	subtractBed	intrn	720757	721296	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_hAT-Tip100	720757	721296	43	+	.	.
scaffold6	subtractBed	intrn	723513	723519	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_hAT	723394	723519	58	+	.	.
scaffold6	subtractBed	intrn	723882	723902	.	+	.	Parent=CGI_10022334;
	scaffold6	WUBlastX	DNA_hAT-Tip100	723687	723902	67	+	.	.
scaffold6	subtractBed	intrn	728937	728984	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	728937	728984	96	+	.	.
scaffold6	subtractBed	intrn	733727	733783	.	+	.	Parent=CGI_10022334;
	scaffold6	TRF	Tandem_Repeat	733727	733783	114	+	.	.
scaffold60	subtractBed	intrn	33298	33355	.	+	.	Parent=CGI_10004681;
	scaffold60	TRF	Tandem_Repeat	33298	33355	116	+	.	.
scaffold60	subtractBed	intrn	33371	33405	.	+	.	Parent=CGI_10004681;
	scaffold60	TRF	Tandem_Repeat	33371	33405	52	+	.	.
scaffold60	subtractBed	intrn	34860	34899	.	+	.	Parent=CGI_10004681;
	scaffold60	TRF	Tandem_Repeat	34860	34899	80	+	.	.
scaffold60	subtractBed	intrn	67136	67190	.	-	.	Parent=CGI_10004684;
	scaffold60	TRF	Tandem_Repeat	67136	67190	96	+	.	.
scaffold601	subtractBed	intrn	23742	23986	.	-	.	Parent=CGI_10026801;
	scaffold601	TRF	Tandem_Repeat	23742	23986	259	+	.	.
scaffold601	subtractBed	intrn	129466	129532	.	-	.	Parent=CGI_10026806;
	scaffold601	TRF	Tandem_Repeat	129466	129532	91	+	.	.
scaffold601	subtractBed	intrn	129568	129619	.	-	.	Parent=CGI_10026806;
	scaffold601	TRF	Tandem_Repeat	129568	129619	95	+	.	.
scaffold601	subtractBed	intrn	182117	182369	.	-	.	Parent=CGI_10026810;
	scaffold601	TRF	Tandem_Repeat	182117	182402	446	+	.	.
scaffold601	subtractBed	intrn	231836	232925	.	-	.	Parent=CGI_10026812;
	scaffold601	TRF	Tandem_Repeat	231836	232925	419	+	.	.
scaffold601	subtractBed	intrn	231836	232998	.	-	.	Parent=CGI_10026812;
	scaffold601	TRF	Tandem_Repeat	231836	232998	648	+	.	.
scaffold601	subtractBed	intrn	231847	232967	.	-	.	Parent=CGI_10026812;
	scaffold601	TRF	Tandem_Repeat	231847	232967	582	+	.	.
scaffold601	subtractBed	intrn	234634	235095	.	-	.	Parent=CGI_10026812;
	scaffold601	TRF	Tandem_Repeat	234634	235095	609	+	.	.
scaffold601	subtractBed	intrn	281188	281307	.	-	.	Parent=CGI_10026818;
	scaffold601	TRF	Tandem_Repeat	281188	281307	231	+	.	.
scaffold601	subtractBed	intrn	301749	301809	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	301749	301809	122	+	.	.
scaffold601	subtractBed	intrn	312977	313297	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	312977	313327	431	+	.	.
scaffold601	subtractBed	intrn	316605	316775	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	316605	316775	288	+	.	.
scaffold601	subtractBed	intrn	319250	319646	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	319250	319684	490	+	.	.
scaffold601	subtractBed	intrn	322510	322648	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	322502	322648	204	+	.	.
scaffold601	subtractBed	intrn	322670	323360	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	322670	323360	1301	+	.	.
scaffold601	subtractBed	intrn	324256	324347	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	324256	324347	89	+	.	.
scaffold601	subtractBed	intrn	327007	327043	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	327007	327043	74	+	.	.
scaffold601	subtractBed	intrn	332422	332883	.	+	.	Parent=CGI_10026821;
	scaffold601	TRF	Tandem_Repeat	332422	332913	867	+	.	.
scaffold601	subtractBed	intrn	372152	372191	.	+	.	Parent=CGI_10026822;
	scaffold601	TRF	Tandem_Repeat	372152	372191	55	+	.	.
scaffold601	subtractBed	intrn	374497	374562	.	+	.	Parent=CGI_10026822;
	scaffold601	WUBlastX	LINE_L2	374497	374562	20	+	.	.
scaffold601	subtractBed	intrn	377228	378025	.	+	.	Parent=CGI_10026822;
	scaffold601	WUBlastX	LINE_L1-Tx1	377228	378025	191	+	.	.
scaffold601	subtractBed	intrn	374856	377222	.	+	.	Parent=CGI_10026822;
	scaffold601	WUBlastX	LINE_L1-Tx1	374856	377222	1398	+	.	.
scaffold601	subtractBed	intrn	463601	465832	.	+	.	Parent=CGI_10026828;
	scaffold601	TRF	Tandem_Repeat	463601	465832	3126	+	.	.
scaffold601	subtractBed	intrn	463601	465832	.	+	.	Parent=CGI_10026828;
	scaffold601	TRF	Tandem_Repeat	463601	465832	3258	+	.	.
scaffold601	subtractBed	intrn	463601	465832	.	+	.	Parent=CGI_10026828;
	scaffold601	TRF	Tandem_Repeat	463601	465832	3345	+	.	.
scaffold601	subtractBed	intrn	469578	470433	.	+	.	Parent=CGI_10026828;
	scaffold601	TRF	Tandem_Repeat	469578	470433	920	+	.	.
scaffold601	subtractBed	intrn	486564	486603	.	+	.	Parent=CGI_10026830;
	scaffold601	TRF	Tandem_Repeat	486564	486603	73	+	.	.
scaffold601	subtractBed	intrn	488980	489273	.	+	.	Parent=CGI_10026830;
	scaffold601	WUBlastX	DNA_IS4EU	488980	489462	70	+	.	.
scaffold601	subtractBed	intrn	489268	489273	.	+	.	Parent=CGI_10026830;
	scaffold601	WUBlastX	DNA_IS4EU	489268	489465	99	+	.	.
scaffold601	subtractBed	intrn	494051	494140	.	+	.	Parent=CGI_10026831;
	scaffold601	TRF	Tandem_Repeat	494051	494140	162	+	.	.
scaffold601	subtractBed	intrn	501717	501937	.	-	.	Parent=CGI_10026832;
	scaffold601	TRF	Tandem_Repeat	501717	501937	164	+	.	.
scaffold601	subtractBed	intrn	501936	502127	.	-	.	Parent=CGI_10026832;
	scaffold601	TRF	Tandem_Repeat	501936	502127	186	+	.	.
scaffold601	subtractBed	intrn	505318	505818	.	-	.	Parent=CGI_10026832;
	scaffold601	TRF	Tandem_Repeat	505318	505818	407	+	.	.
scaffold601	subtractBed	intrn	505318	505818	.	-	.	Parent=CGI_10026832;
	scaffold601	TRF	Tandem_Repeat	505318	505818	450	+	.	.
scaffold601	subtractBed	intrn	537553	537597	.	+	.	Parent=CGI_10026835;
	scaffold601	TRF	Tandem_Repeat	537553	537597	90	+	.	.
scaffold601	subtractBed	intrn	581636	581824	.	-	.	Parent=CGI_10026837;
	scaffold601	WUBlastX	LTR_Ngaro	581636	581824	35	+	.	.
scaffold601	subtractBed	intrn	581579	581770	.	-	.	Parent=CGI_10026837;
	scaffold601	WUBlastX	LTR_Ngaro	581579	581770	82	+	.	.
scaffold601	subtractBed	intrn	581346	581714	.	-	.	Parent=CGI_10026837;
	scaffold601	WUBlastX	LTR_Ngaro	581346	581714	23	+	.	.
scaffold601	subtractBed	intrn	599508	600170	.	-	.	Parent=CGI_10026838;
	scaffold601	TRF	Tandem_Repeat	599508	600170	956	+	.	.
scaffold601	subtractBed	intrn	600181	600215	.	-	.	Parent=CGI_10026838;
	scaffold601	TRF	Tandem_Repeat	600181	600215	52	+	.	.
scaffold601	subtractBed	intrn	600177	600211	.	-	.	Parent=CGI_10026838;
	scaffold601	TRF	Tandem_Repeat	600177	600211	61	+	.	.
scaffold601	subtractBed	intrn	600548	602230	.	-	.	Parent=CGI_10026838;
	scaffold601	WUBlastX	LINE_RTE-BovB	600548	602230	1551	+	.	.
scaffold601	subtractBed	intrn	600386	601423	.	-	.	Parent=CGI_10026838;
	scaffold601	WUBlastX	LINE_CR1	600386	601423	181	+	.	.
scaffold601	subtractBed	intrn	602502	602576	.	-	.	Parent=CGI_10026838;
	scaffold601	WUBlastX	LINE_CR1	602502	602576	22	+	.	.
scaffold601	subtractBed	intrn	648935	648966	.	+	.	Parent=CGI_10026840;
	scaffold601	TRF	Tandem_Repeat	648935	648966	64	+	.	.
scaffold601	subtractBed	intrn	648966	649007	.	+	.	Parent=CGI_10026840;
	scaffold601	TRF	Tandem_Repeat	648966	649007	84	+	.	.
scaffold601	subtractBed	intrn	666237	666290	.	-	.	Parent=CGI_10026841;
	scaffold601	TRF	Tandem_Repeat	666237	666290	72	+	.	.
scaffold601	subtractBed	intrn	825986	829876	.	+	.	Parent=CGI_10026849;
	scaffold601	TRF	Tandem_Repeat	825986	829876	3894	+	.	.
scaffold601	subtractBed	intrn	834064	834500	.	+	.	Parent=CGI_10026849;
	scaffold601	WUBlastX	LINE_RTE-X	834064	834705	47	+	.	.
scaffold601	subtractBed	intrn	834319	834500	.	+	.	Parent=CGI_10026849;
	scaffold601	WUBlastX	LINE_RTE-X	834319	834705	77	+	.	.
scaffold601	subtractBed	intrn	834209	834331	.	+	.	Parent=CGI_10026849;
	scaffold601	WUBlastX	LINE_RTE-X	834209	834331	67	+	.	.
scaffold601	subtractBed	intrn	833987	834397	.	+	.	Parent=CGI_10026849;
	scaffold601	WUBlastX	LINE_RTE-X	833987	834397	23	+	.	.
scaffold601	subtractBed	intrn	889997	890672	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	889997	890672	911	+	.	.
scaffold601	subtractBed	intrn	898244	899164	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	898244	899164	1283	+	.	.
scaffold601	subtractBed	intrn	899369	899406	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	899369	899406	58	+	.	.
scaffold601	subtractBed	intrn	901227	901279	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	901227	901279	106	+	.	.
scaffold601	subtractBed	intrn	902795	902820	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	902795	902820	52	+	.	.
scaffold601	subtractBed	intrn	910852	910890	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	910852	910890	78	+	.	.
scaffold601	subtractBed	intrn	918062	918107	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	918062	918107	56	+	.	.
scaffold601	subtractBed	intrn	918069	918120	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	918069	918120	59	+	.	.
scaffold601	subtractBed	intrn	917079	918038	.	-	.	Parent=CGI_10026852;
	scaffold601	TRF	Tandem_Repeat	917079	918038	1451	+	.	.
scaffold601	subtractBed	intrn	1011331	1011355	.	+	.	Parent=CGI_10026854;
	scaffold601	TRF	Tandem_Repeat	1011331	1011355	50	+	.	.
scaffold601	subtractBed	intrn	1012398	1012482	.	+	.	Parent=CGI_10026854;
	scaffold601	TRF	Tandem_Repeat	1012398	1012482	143	+	.	.
scaffold601	subtractBed	intrn	1055636	1055704	.	+	.	Parent=CGI_10026856;
	scaffold601	TRF	Tandem_Repeat	1055636	1055704	113	+	.	.
scaffold601	subtractBed	intrn	1100045	1100165	.	+	.	Parent=CGI_10026858;
	scaffold601	TRF	Tandem_Repeat	1100045	1100165	111	+	.	.
scaffold601	subtractBed	intrn	1101008	1101113	.	+	.	Parent=CGI_10026858;
	scaffold601	TRF	Tandem_Repeat	1101008	1101113	131	+	.	.
scaffold601	subtractBed	intrn	1101017	1101113	.	+	.	Parent=CGI_10026858;
	scaffold601	TRF	Tandem_Repeat	1101017	1101113	185	+	.	.
scaffold601	subtractBed	intrn	1107819	1108386	.	+	.	Parent=CGI_10026858;
	scaffold601	TRF	Tandem_Repeat	1107819	1108386	1100	+	.	.
scaffold601	subtractBed	intrn	1108702	1109516	.	+	.	Parent=CGI_10026858;
	scaffold601	TRF	Tandem_Repeat	1108702	1109516	1477	+	.	.
scaffold601	subtractBed	intrn	1203343	1203447	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1203343	1203447	101	+	.	.
scaffold601	subtractBed	intrn	1203335	1203685	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1203335	1203685	366	+	.	.
scaffold601	subtractBed	intrn	1203480	1203609	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1203480	1203609	103	+	.	.
scaffold601	subtractBed	intrn	1203610	1203758	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1203610	1203758	95	+	.	.
scaffold601	subtractBed	intrn	1204873	1204953	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1204873	1204953	63	+	.	.
scaffold601	subtractBed	intrn	1209493	1209579	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1209493	1209579	111	+	.	.
scaffold601	subtractBed	intrn	1209571	1210274	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1209571	1210274	261	+	.	.
scaffold601	subtractBed	intrn	1209610	1209920	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1209610	1209920	278	+	.	.
scaffold601	subtractBed	intrn	1209673	1211601	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1209673	1211601	408	+	.	.
scaffold601	subtractBed	intrn	1209924	1211702	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1209924	1211702	1359	+	.	.
scaffold601	subtractBed	intrn	1211944	1212066	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1211944	1212066	60	+	.	.
scaffold601	subtractBed	intrn	1212670	1212752	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1212670	1212752	67	+	.	.
scaffold601	subtractBed	intrn	1211986	1212572	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1211986	1212572	274	+	.	.
scaffold601	subtractBed	intrn	1212133	1212549	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1212133	1212549	536	+	.	.
scaffold601	subtractBed	intrn	1218358	1218608	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1218358	1218608	461	+	.	.
scaffold601	subtractBed	intrn	1222014	1222271	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1222014	1222271	462	+	.	.
scaffold601	subtractBed	intrn	1222250	1222338	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1222250	1222338	178	+	.	.
scaffold601	subtractBed	intrn	1222968	1223407	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1222968	1223407	745	+	.	.
scaffold601	subtractBed	intrn	1224500	1225173	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1224500	1225173	444	+	.	.
scaffold601	subtractBed	intrn	1224495	1225040	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1224495	1225040	580	+	.	.
scaffold601	subtractBed	intrn	1226297	1226531	.	-	.	Parent=CGI_10026861;
	scaffold601	TRF	Tandem_Repeat	1226297	1226531	344	+	.	.
scaffold601	subtractBed	intrn	1229484	1229582	.	-	.	Parent=CGI_10026862;
	scaffold601	WUBlastX	LINE_L2	1229484	1229582	22	+	.	.
scaffold601	subtractBed	intrn	1229529	1232717	.	-	.	Parent=CGI_10026862;
	scaffold601	WUBlastX	LINE_L2	1229529	1232717	1742	+	.	.
scaffold601	subtractBed	intrn	1234727	1234781	.	-	.	Parent=CGI_10026862;
	scaffold601	TRF	Tandem_Repeat	1234727	1234781	101	+	.	.
scaffold601	subtractBed	intrn	1243593	1243634	.	+	.	Parent=CGI_10026863;
	scaffold601	TRF	Tandem_Repeat	1243593	1243634	84	+	.	.
scaffold601	subtractBed	intrn	1243693	1243724	.	+	.	Parent=CGI_10026863;
	scaffold601	TRF	Tandem_Repeat	1243693	1243724	64	+	.	.
scaffold601	subtractBed	intrn	1254301	1255206	.	-	.	Parent=CGI_10026864;
	scaffold601	TRF	Tandem_Repeat	1254301	1255206	1740	+	.	.
scaffold601	subtractBed	intrn	1257496	1257712	.	-	.	Parent=CGI_10026864;
	scaffold601	TRF	Tandem_Repeat	1257496	1257712	251	+	.	.
scaffold602	subtractBed	intrn	42082	42128	.	+	.	Parent=CGI_10023171;
	scaffold602	TRF	Tandem_Repeat	42082	42128	67	+	.	.
scaffold602	subtractBed	intrn	43144	43203	.	+	.	Parent=CGI_10023171;
	scaffold602	TRF	Tandem_Repeat	43144	43203	75	+	.	.
scaffold602	subtractBed	intrn	41480	41851	.	+	.	Parent=CGI_10023171;
	scaffold602	WUBlastX	LINE_RTE-X	41480	41851	159	-	.	.
scaffold602	subtractBed	intrn	41600	42073	.	+	.	Parent=CGI_10023171;
	scaffold602	WUBlastX	LINE_RTE-X	41600	42073	202	-	.	.
scaffold602	subtractBed	intrn	222149	222173	.	-	.	Parent=CGI_10023178;
	scaffold602	TRF	Tandem_Repeat	222149	222173	50	+	.	.
scaffold602	subtractBed	intrn	245747	245785	.	-	.	Parent=CGI_10023179;
	scaffold602	TRF	Tandem_Repeat	245747	245785	78	+	.	.
scaffold602	subtractBed	intrn	257360	257396	.	+	.	Parent=CGI_10023180;
	scaffold602	TRF	Tandem_Repeat	257360	257396	74	+	.	.
scaffold602	subtractBed	intrn	316543	317197	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	316543	317197	892	+	.	.
scaffold602	subtractBed	intrn	317204	317262	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	317204	317262	55	+	.	.
scaffold602	subtractBed	intrn	317207	317261	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	317207	317261	101	+	.	.
scaffold602	subtractBed	intrn	317204	317274	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	317204	317274	70	+	.	.
scaffold602	subtractBed	intrn	317204	317275	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	317204	317275	54	+	.	.
scaffold602	subtractBed	intrn	317211	317273	.	-	.	Parent=CGI_10023181;
	scaffold602	TRF	Tandem_Repeat	317211	317273	63	+	.	.
scaffold602	subtractBed	intrn	338172	338270	.	+	.	Parent=CGI_10023182;
	scaffold602	TRF	Tandem_Repeat	338172	338270	162	+	.	.
scaffold602	subtractBed	intrn	347222	347500	.	+	.	Parent=CGI_10023182;
	scaffold602	TRF	Tandem_Repeat	347222	347500	356	+	.	.
scaffold602	subtractBed	intrn	352241	352404	.	+	.	Parent=CGI_10023182;
	scaffold602	TRF	Tandem_Repeat	352241	352404	301	+	.	.
scaffold602	subtractBed	intrn	369076	369136	.	+	.	Parent=CGI_10023182;
	scaffold602	TRF	Tandem_Repeat	369076	369136	122	+	.	.
scaffold602	subtractBed	intrn	369604	369646	.	+	.	Parent=CGI_10023182;
	scaffold602	TRF	Tandem_Repeat	369604	369646	77	+	.	.
scaffold602	subtractBed	intrn	373669	374818	.	-	.	Parent=CGI_10023183;
	scaffold602	TRF	Tandem_Repeat	373669	374818	1214	+	.	.
scaffold602	subtractBed	intrn	423057	423959	.	+	.	Parent=CGI_10023186;
	scaffold602	TRF	Tandem_Repeat	423057	423959	1307	+	.	.
scaffold602	subtractBed	intrn	475163	475223	.	+	.	Parent=CGI_10023189;
	scaffold602	TRF	Tandem_Repeat	475163	475223	122	+	.	.
scaffold602	subtractBed	intrn	480669	480708	.	+	.	Parent=CGI_10023189;
	scaffold602	TRF	Tandem_Repeat	480669	480708	53	+	.	.
scaffold602	subtractBed	intrn	491685	491968	.	-	.	Parent=CGI_10023191;
	scaffold602	TRF	Tandem_Repeat	491685	491968	353	+	.	.
scaffold602	subtractBed	intrn	497011	497046	.	-	.	Parent=CGI_10023191;
	scaffold602	TRF	Tandem_Repeat	497011	497046	72	+	.	.
scaffold602	subtractBed	intrn	546369	547770	.	+	.	Parent=CGI_10023194;
	scaffold602	TRF	Tandem_Repeat	546369	547770	2243	+	.	.
scaffold602	subtractBed	intrn	599365	599404	.	+	.	Parent=CGI_10023196;
	scaffold602	TRF	Tandem_Repeat	599365	599404	80	+	.	.
scaffold602	subtractBed	intrn	600857	600921	.	+	.	Parent=CGI_10023196;
	scaffold602	TRF	Tandem_Repeat	600857	600921	112	+	.	.
scaffold602	subtractBed	intrn	613031	613201	.	+	.	Parent=CGI_10023196;
	scaffold602	WUBlastX	DNA_Harbinger	613031	613201	78	+	.	.
scaffold602	subtractBed	intrn	612218	612406	.	+	.	Parent=CGI_10023196;
	scaffold602	WUBlastX	DNA_Harbinger	612218	612406	67	+	.	.
scaffold602	subtractBed	intrn	616445	616449	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616312	616449	51	-	.	.
scaffold602	subtractBed	intrn	616537	616797	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616537	616797	200	-	.	.
scaffold602	subtractBed	intrn	616958	616958	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616958	617296	162	-	.	.
scaffold602	subtractBed	intrn	616445	616449	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616333	616449	60	-	.	.
scaffold602	subtractBed	intrn	616528	616860	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616528	616860	169	-	.	.
scaffold602	subtractBed	intrn	616946	616958	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616946	617347	62	-	.	.
scaffold602	subtractBed	intrn	616445	616449	.	-	.	Parent=CGI_10023197;
	scaffold602	WUBlastX	DNA_Harbinger	616231	616449	43	-	.	.
scaffold602	subtractBed	intrn	674190	674225	.	-	.	Parent=CGI_10023199;
	scaffold602	TRF	Tandem_Repeat	674190	674225	72	+	.	.
scaffold602	subtractBed	intrn	678650	678700	.	-	.	Parent=CGI_10023199;
	scaffold602	TRF	Tandem_Repeat	678650	678700	102	+	.	.
scaffold602	subtractBed	intrn	698048	698118	.	-	.	Parent=CGI_10023200;
	scaffold602	TRF	Tandem_Repeat	698048	698118	81	+	.	.
scaffold602	subtractBed	intrn	698550	699269	.	-	.	Parent=CGI_10023200;
	scaffold602	TRF	Tandem_Repeat	698550	699269	881	+	.	.
scaffold602	subtractBed	intrn	699146	699170	.	-	.	Parent=CGI_10023200;
	scaffold602	TRF	Tandem_Repeat	699146	699170	50	+	.	.
scaffold602	subtractBed	intrn	708480	708520	.	-	.	Parent=CGI_10023200;
	scaffold602	TRF	Tandem_Repeat	708480	708520	55	+	.	.
scaffold602	subtractBed	intrn	734341	734379	.	-	.	Parent=CGI_10023202;
	scaffold602	TRF	Tandem_Repeat	734341	734379	78	+	.	.
scaffold602	subtractBed	intrn	749939	750003	.	-	.	Parent=CGI_10023202;
	scaffold602	TRF	Tandem_Repeat	749939	750003	121	+	.	.
scaffold602	subtractBed	intrn	787660	787694	.	+	.	Parent=CGI_10023204;
	scaffold602	TRF	Tandem_Repeat	787660	787694	56	+	.	.
scaffold602	subtractBed	intrn	794008	794142	.	+	.	Parent=CGI_10023204;
	scaffold602	WUBlastX	LTR_Gypsy	794008	794142	72	+	.	.
scaffold602	subtractBed	intrn	793975	794142	.	+	.	Parent=CGI_10023204;
	scaffold602	WUBlastX	LTR_Gypsy	793975	794142	59	+	.	.
scaffold602	subtractBed	intrn	800998	801295	.	-	.	Parent=CGI_10023205;
	scaffold602	TRF	Tandem_Repeat	800998	801295	587	+	.	.
scaffold602	subtractBed	intrn	804224	804250	.	-	.	Parent=CGI_10023206;
	scaffold602	TRF	Tandem_Repeat	804224	804250	54	+	.	.
scaffold602	subtractBed	intrn	818656	818822	.	-	.	Parent=CGI_10023208;
	scaffold602	TRF	Tandem_Repeat	818656	818822	115	+	.	.
scaffold602	subtractBed	intrn	821613	821639	.	-	.	Parent=CGI_10023208;
	scaffold602	TRF	Tandem_Repeat	821613	821639	54	+	.	.
scaffold602	subtractBed	intrn	824106	824295	.	-	.	Parent=CGI_10023208;
	scaffold602	TRF	Tandem_Repeat	824106	824295	308	+	.	.
scaffold603	subtractBed	intrn	18167	18421	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1	18167	18421	101	-	.	.
scaffold603	subtractBed	intrn	17018	17824	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1-Tx1	17018	17824	231	-	.	.
scaffold603	subtractBed	intrn	17883	18185	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1-Tx1	17883	18185	212	-	.	.
scaffold603	subtractBed	intrn	18439	19599	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1-Tx1	18439	19599	151	-	.	.
scaffold603	subtractBed	intrn	19277	19675	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1	19277	19675	35	-	.	.
scaffold603	subtractBed	intrn	16477	16758	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1	16477	16758	41	-	.	.
scaffold603	subtractBed	intrn	16504	16830	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1	16504	16830	31	-	.	.
scaffold603	subtractBed	intrn	20352	20453	.	-	.	Parent=CGI_10009894;
	scaffold603	WUBlastX	LINE_L1	20352	20453	23	-	.	.
scaffold603	subtractBed	intrn	78288	78303	.	+	.	Parent=CGI_10009899;
	scaffold603	WUBlastX	DNA_Crypton	78288	78551	62	+	.	.
scaffold603	subtractBed	intrn	81806	81860	.	-	.	Parent=CGI_10009900;
	scaffold603	TRF	Tandem_Repeat	81806	81860	65	+	.	.
scaffold603	subtractBed	intrn	81802	81861	.	-	.	Parent=CGI_10009900;
	scaffold603	TRF	Tandem_Repeat	81802	81861	75	+	.	.
scaffold603	subtractBed	intrn	90196	91215	.	-	.	Parent=CGI_10009900;
	scaffold603	TRF	Tandem_Repeat	90196	91215	1514	+	.	.
scaffold603	subtractBed	intrn	91377	91426	.	-	.	Parent=CGI_10009900;
	scaffold603	TRF	Tandem_Repeat	91377	91426	57	+	.	.
scaffold603	subtractBed	intrn	93035	93205	.	-	.	Parent=CGI_10009900;
	scaffold603	TRF	Tandem_Repeat	93035	93205	147	+	.	.
scaffold603	subtractBed	intrn	107373	107410	.	-	.	Parent=CGI_10009901;
	scaffold603	TRF	Tandem_Repeat	107373	107410	76	+	.	.
scaffold603	subtractBed	intrn	117634	117688	.	-	.	Parent=CGI_10009901;
	scaffold603	TRF	Tandem_Repeat	117634	117688	67	+	.	.
scaffold603	subtractBed	intrn	118388	118422	.	-	.	Parent=CGI_10009901;
	scaffold603	TRF	Tandem_Repeat	118388	118422	70	+	.	.
scaffold603	subtractBed	intrn	119110	119163	.	-	.	Parent=CGI_10009901;
	scaffold603	TRF	Tandem_Repeat	119110	119163	101	+	.	.
scaffold603	subtractBed	intrn	120952	120988	.	-	.	Parent=CGI_10009901;
	scaffold603	TRF	Tandem_Repeat	120952	120988	74	+	.	.
scaffold603	subtractBed	intrn	146538	146576	.	-	.	Parent=CGI_10009903;
	scaffold603	TRF	Tandem_Repeat	146538	146576	60	+	.	.
scaffold603	subtractBed	intrn	146538	146576	.	+	.	Parent=CGI_10009904;
	scaffold603	TRF	Tandem_Repeat	146538	146576	60	+	.	.
scaffold603	subtractBed	intrn	156067	156377	.	+	.	Parent=CGI_10009904;
	scaffold603	TRF	Tandem_Repeat	156040	156377	441	+	.	.
scaffold603	subtractBed	intrn	161275	161379	.	-	.	Parent=CGI_10009905;
	scaffold603	WUBlastX	LTR_DIRS	161275	161379	60	+	.	.
scaffold603	subtractBed	intrn	183605	183657	.	+	.	Parent=CGI_10009907;
	scaffold603	TRF	Tandem_Repeat	183605	183657	106	+	.	.
scaffold603	subtractBed	intrn	191344	191406	.	+	.	Parent=CGI_10009907;
	scaffold603	TRF	Tandem_Repeat	191344	191406	76	+	.	.
scaffold603	subtractBed	intrn	195215	195251	.	+	.	Parent=CGI_10009907;
	scaffold603	TRF	Tandem_Repeat	195215	195251	65	+	.	.
scaffold603	subtractBed	intrn	195725	195814	.	+	.	Parent=CGI_10009907;
	scaffold603	TRF	Tandem_Repeat	195725	195814	99	+	.	.
scaffold603	subtractBed	intrn	183605	183657	.	-	.	Parent=CGI_10009908;
	scaffold603	TRF	Tandem_Repeat	183605	183657	106	+	.	.
scaffold603	subtractBed	intrn	191344	191406	.	-	.	Parent=CGI_10009910;
	scaffold603	TRF	Tandem_Repeat	191344	191406	76	+	.	.
scaffold603	subtractBed	intrn	195215	195251	.	-	.	Parent=CGI_10009910;
	scaffold603	TRF	Tandem_Repeat	195215	195251	65	+	.	.
scaffold603	subtractBed	intrn	195725	195814	.	-	.	Parent=CGI_10009910;
	scaffold603	TRF	Tandem_Repeat	195725	195814	99	+	.	.
scaffold603	subtractBed	intrn	199381	199425	.	+	.	Parent=CGI_10009911;
	scaffold603	TRF	Tandem_Repeat	199381	199425	90	+	.	.
scaffold603	subtractBed	intrn	208118	208203	.	-	.	Parent=CGI_10009912;
	scaffold603	TRF	Tandem_Repeat	208118	208203	100	+	.	.
scaffold603	subtractBed	intrn	209621	209711	.	-	.	Parent=CGI_10009912;
	scaffold603	TRF	Tandem_Repeat	209621	209711	146	+	.	.
scaffold604	subtractBed	intrn	14278	14487	.	-	.	Parent=CGI_10005590;
	scaffold604	WUBlastX	LINE_L1-Tx1	14278	14487	92	+	.	.
scaffold604	subtractBed	intrn	18992	19064	.	-	.	Parent=CGI_10005590;
	scaffold604	TRF	Tandem_Repeat	18992	19064	56	+	.	.
scaffold604	subtractBed	intrn	33497	33540	.	-	.	Parent=CGI_10005590;
	scaffold604	TRF	Tandem_Repeat	33497	33540	54	+	.	.
scaffold604	subtractBed	intrn	42853	42890	.	+	.	Parent=CGI_10005591;
	scaffold604	TRF	Tandem_Repeat	42853	42890	76	+	.	.
scaffold604	subtractBed	intrn	44157	44194	.	+	.	Parent=CGI_10005591;
	scaffold604	TRF	Tandem_Repeat	44157	44194	76	+	.	.
scaffold604	subtractBed	intrn	45150	45341	.	+	.	Parent=CGI_10005591;
	scaffold604	WUBlastX	LINE_RTE-X	45150	45341	50	-	.	.
scaffold604	subtractBed	intrn	45198	45338	.	+	.	Parent=CGI_10005591;
	scaffold604	WUBlastX	LINE_RTE-X	45198	45338	54	-	.	.
scaffold604	subtractBed	intrn	45084	45341	.	+	.	Parent=CGI_10005591;
	scaffold604	WUBlastX	LINE_RTE-X	45084	45341	43	-	.	.
scaffold604	subtractBed	intrn	45198	45377	.	+	.	Parent=CGI_10005591;
	scaffold604	WUBlastX	LINE_RTE-X	45198	45377	46	-	.	.
scaffold604	subtractBed	intrn	57964	57988	.	-	.	Parent=CGI_10005592;
	scaffold604	TRF	Tandem_Repeat	57964	57988	50	+	.	.
scaffold604	subtractBed	intrn	59369	59438	.	-	.	Parent=CGI_10005592;
	scaffold604	TRF	Tandem_Repeat	59369	59438	140	+	.	.
scaffold605	subtractBed	intrn	9026	9067	.	+	.	Parent=CGI_10004632;
	scaffold605	TRF	Tandem_Repeat	9026	9067	50	+	.	.
scaffold605	subtractBed	intrn	42729	42790	.	+	.	Parent=CGI_10004633;
	scaffold605	WUBlastX	RC_Helitron	42729	42977	36	+	.	.
scaffold605	subtractBed	intrn	43551	43559	.	+	.	Parent=CGI_10004633;
	scaffold605	WUBlastX	RC_Helitron	43551	44192	27	+	.	.
scaffold605	subtractBed	intrn	72053	73073	.	+	.	Parent=CGI_10004634;
	scaffold605	TRF	Tandem_Repeat	72053	73073	976	+	.	.
scaffold605	subtractBed	intrn	73906	73955	.	+	.	Parent=CGI_10004634;
	scaffold605	TRF	Tandem_Repeat	73906	73955	66	+	.	.
scaffold605	subtractBed	intrn	74121	74942	.	+	.	Parent=CGI_10004634;
	scaffold605	TRF	Tandem_Repeat	74121	74942	1218	+	.	.
scaffold605	subtractBed	intrn	80560	80906	.	+	.	Parent=CGI_10004634;
	scaffold605	TRF	Tandem_Repeat	80560	80906	445	+	.	.
scaffold605	subtractBed	intrn	80560	80906	.	+	.	Parent=CGI_10004634;
	scaffold605	TRF	Tandem_Repeat	80560	80906	427	+	.	.
scaffold606	subtractBed	intrn	67989	68018	.	-	.	Parent=CGI_10012940;
	scaffold606	TRF	Tandem_Repeat	67989	68018	51	+	.	.
scaffold606	subtractBed	intrn	66955	67869	.	-	.	Parent=CGI_10012940;
	scaffold606	WUBlastX	LINE_RTE-X	66955	67869	282	-	.	.
scaffold606	subtractBed	intrn	169141	169775	.	-	.	Parent=CGI_10012945;
	scaffold606	TRF	Tandem_Repeat	169141	169775	461	+	.	.
scaffold606	subtractBed	intrn	169876	169993	.	-	.	Parent=CGI_10012945;
	scaffold606	TRF	Tandem_Repeat	169876	169993	69	+	.	.
scaffold606	subtractBed	intrn	207337	207615	.	-	.	Parent=CGI_10012948;
	scaffold606	WUBlastX	LINE_Penelope	207337	207615	97	-	.	.
scaffold606	subtractBed	intrn	265436	265479	.	+	.	Parent=CGI_10012951;
	scaffold606	TRF	Tandem_Repeat	265436	265479	61	+	.	.
scaffold606	subtractBed	intrn	265668	267393	.	+	.	Parent=CGI_10012951;
	scaffold606	TRF	Tandem_Repeat	265668	267393	2076	+	.	.
scaffold606	subtractBed	intrn	280048	280101	.	+	.	Parent=CGI_10012952;
	scaffold606	TRF	Tandem_Repeat	280048	280101	101	+	.	.
scaffold606	subtractBed	intrn	282974	283036	.	+	.	Parent=CGI_10012952;
	scaffold606	TRF	Tandem_Repeat	282974	283036	119	+	.	.
scaffold606	subtractBed	intrn	283414	283479	.	+	.	Parent=CGI_10012952;
	scaffold606	TRF	Tandem_Repeat	283414	283479	132	+	.	.
scaffold606	subtractBed	intrn	301169	301225	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	301169	301225	105	+	.	.
scaffold606	subtractBed	intrn	302332	302397	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	302332	302397	132	+	.	.
scaffold606	subtractBed	intrn	302814	302959	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	302814	302959	163	+	.	.
scaffold606	subtractBed	intrn	308433	308569	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	308433	308569	115	+	.	.
scaffold606	subtractBed	intrn	313488	313603	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	313488	313603	65	+	.	.
scaffold606	subtractBed	intrn	322236	322268	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	322236	322268	57	+	.	.
scaffold606	subtractBed	intrn	324822	325057	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	324822	325057	149	+	.	.
scaffold606	subtractBed	intrn	324881	325337	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	324881	325337	239	+	.	.
scaffold606	subtractBed	intrn	324981	325323	.	-	.	Parent=CGI_10012955;
	scaffold606	TRF	Tandem_Repeat	324981	325323	296	+	.	.
scaffold608	subtractBed	intrn	2831	4118	.	-	.	Parent=CGI_10003699;
	scaffold608	TRF	Tandem_Repeat	2831	4118	2228	+	.	.
scaffold608	subtractBed	intrn	7144	8329	.	-	.	Parent=CGI_10003699;
	scaffold608	TRF	Tandem_Repeat	7144	8329	593	+	.	.
scaffold608	subtractBed	intrn	7144	8329	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	7144	8329	593	+	.	.
scaffold608	subtractBed	intrn	27922	28610	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	27922	28610	936	+	.	.
scaffold608	subtractBed	intrn	27922	28610	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	27922	28610	975	+	.	.
scaffold608	subtractBed	intrn	27922	28610	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	27922	28610	913	+	.	.
scaffold608	subtractBed	intrn	32437	33495	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	32437	33495	1569	+	.	.
scaffold608	subtractBed	intrn	32437	33495	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	32437	33495	1595	+	.	.
scaffold608	subtractBed	intrn	34848	34877	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	34848	34877	51	+	.	.
scaffold608	subtractBed	intrn	36583	37174	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	36583	37174	871	+	.	.
scaffold608	subtractBed	intrn	37208	37466	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	37208	37466	150	+	.	.
scaffold608	subtractBed	intrn	39968	40249	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	39968	40249	465	+	.	.
scaffold608	subtractBed	intrn	39968	40287	.	+	.	Parent=CGI_10003700;
	scaffold608	TRF	Tandem_Repeat	39968	40287	405	+	.	.
scaffold609	subtractBed	intrn	7184	7217	.	+	.	Parent=CGI_10010458;
	scaffold609	TRF	Tandem_Repeat	7184	7217	68	+	.	.
scaffold609	subtractBed	intrn	7641	7682	.	+	.	Parent=CGI_10010458;
	scaffold609	TRF	Tandem_Repeat	7641	7682	84	+	.	.
scaffold609	subtractBed	intrn	7841	7882	.	+	.	Parent=CGI_10010458;
	scaffold609	TRF	Tandem_Repeat	7841	7882	84	+	.	.
scaffold609	subtractBed	intrn	186214	186438	.	+	.	Parent=CGI_10010464;
	scaffold609	WUBlastX	LINE_RTE-X	186214	186438	130	-	.	.
scaffold609	subtractBed	intrn	186076	186438	.	+	.	Parent=CGI_10010464;
	scaffold609	WUBlastX	LINE_RTE-X	186076	186438	102	-	.	.
scaffold61	subtractBed	intrn	24171	24237	.	-	.	Parent=CGI_10016336;
	scaffold61	TRF	Tandem_Repeat	24171	24237	50	+	.	.
scaffold61	subtractBed	intrn	24170	24227	.	-	.	Parent=CGI_10016336;
	scaffold61	TRF	Tandem_Repeat	24170	24227	50	+	.	.
scaffold61	subtractBed	intrn	24170	24239	.	-	.	Parent=CGI_10016336;
	scaffold61	TRF	Tandem_Repeat	24170	24239	62	+	.	.
scaffold61	subtractBed	intrn	41748	41906	.	+	.	Parent=CGI_10016337;
	scaffold61	WUBlastX	LINE_RTE-X	41748	41906	53	+	.	.
scaffold61	subtractBed	intrn	57773	57814	.	+	.	Parent=CGI_10016339;
	scaffold61	TRF	Tandem_Repeat	57773	57814	84	+	.	.
scaffold61	subtractBed	intrn	60341	60534	.	+	.	Parent=CGI_10016339;
	scaffold61	TRF	Tandem_Repeat	60341	60534	130	+	.	.
scaffold61	subtractBed	intrn	90273	90362	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_Jockey	90273	90362	20	+	.	.
scaffold61	subtractBed	intrn	91789	91877	.	-	.	Parent=CGI_10016342;
	scaffold61	TRF	Tandem_Repeat	91789	91877	171	+	.	.
scaffold61	subtractBed	intrn	91956	92267	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	91956	92267	123	+	.	.
scaffold61	subtractBed	intrn	91091	91441	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	91091	91441	68	+	.	.
scaffold61	subtractBed	intrn	92046	92267	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	92046	92267	151	+	.	.
scaffold61	subtractBed	intrn	92270	92707	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	92270	92707	104	+	.	.
scaffold61	subtractBed	intrn	91091	91372	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	91091	91372	91	+	.	.
scaffold61	subtractBed	intrn	92046	92312	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	92046	92312	115	+	.	.
scaffold61	subtractBed	intrn	91091	91549	.	-	.	Parent=CGI_10016342;
	scaffold61	WUBlastX	LINE_RTE-X	91091	91549	30	+	.	.
scaffold61	subtractBed	intrn	94155	94208	.	-	.	Parent=CGI_10016342;
	scaffold61	TRF	Tandem_Repeat	94155	94208	108	+	.	.
scaffold61	subtractBed	intrn	136290	136327	.	+	.	Parent=CGI_10016345;
	scaffold61	TRF	Tandem_Repeat	136290	136327	76	+	.	.
scaffold61	subtractBed	intrn	165007	165574	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	DNA_Academ	164918	165574	152	-	.	.
scaffold61	subtractBed	intrn	165774	167135	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	DNA_Academ	165774	167135	395	-	.	.
scaffold61	subtractBed	intrn	165152	165775	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	DNA_Academ	165152	165775	381	-	.	.
scaffold61	subtractBed	intrn	165771	166871	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	DNA_Academ	165771	166871	554	-	.	.
scaffold61	subtractBed	intrn	169426	169469	.	-	.	Parent=CGI_10016346;
	scaffold61	TRF	Tandem_Repeat	169426	169469	88	+	.	.
scaffold61	subtractBed	intrn	177374	177423	.	-	.	Parent=CGI_10016346;
	scaffold61	TRF	Tandem_Repeat	177374	177423	55	+	.	.
scaffold61	subtractBed	intrn	179050	179103	.	-	.	Parent=CGI_10016346;
	scaffold61	TRF	Tandem_Repeat	179050	179103	90	+	.	.
scaffold61	subtractBed	intrn	185250	186302	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	LINE_L2	185250	186302	59	-	.	.
scaffold61	subtractBed	intrn	185211	186080	.	-	.	Parent=CGI_10016346;
	scaffold61	WUBlastX	LINE_L2	185211	186080	259	-	.	.
scaffold61	subtractBed	intrn	191151	191157	.	+	.	Parent=CGI_10016347;
	scaffold61	WUBlastX	DNA_Sola	191151	191297	70	+	.	.
scaffold61	subtractBed	intrn	191547	191548	.	+	.	Parent=CGI_10016347;
	scaffold61	WUBlastX	DNA_Sola	191547	191753	43	+	.	.
scaffold61	subtractBed	intrn	218342	218390	.	+	.	Parent=CGI_10016348;
	scaffold61	TRF	Tandem_Repeat	218342	218390	98	+	.	.
scaffold61	subtractBed	intrn	239603	239647	.	+	.	Parent=CGI_10016349;
	scaffold61	TRF	Tandem_Repeat	239603	239647	56	+	.	.
scaffold61	subtractBed	intrn	259051	259115	.	+	.	Parent=CGI_10016351;
	scaffold61	TRF	Tandem_Repeat	259051	259115	67	+	.	.
scaffold61	subtractBed	intrn	259075	259119	.	+	.	Parent=CGI_10016351;
	scaffold61	TRF	Tandem_Repeat	259075	259119	63	+	.	.
scaffold61	subtractBed	intrn	259073	259143	.	+	.	Parent=CGI_10016351;
	scaffold61	TRF	Tandem_Repeat	259073	259143	70	+	.	.
scaffold61	subtractBed	intrn	259113	259147	.	+	.	Parent=CGI_10016351;
	scaffold61	TRF	Tandem_Repeat	259113	259147	70	+	.	.
scaffold61	subtractBed	intrn	274976	275007	.	+	.	Parent=CGI_10016352;
	scaffold61	TRF	Tandem_Repeat	274976	275007	55	+	.	.
scaffold61	subtractBed	intrn	280682	280735	.	+	.	Parent=CGI_10016352;
	scaffold61	TRF	Tandem_Repeat	280682	280735	108	+	.	.
scaffold61	subtractBed	intrn	280735	280768	.	+	.	Parent=CGI_10016352;
	scaffold61	TRF	Tandem_Repeat	280735	280768	68	+	.	.
scaffold61	subtractBed	intrn	289255	289288	.	+	.	Parent=CGI_10016353;
	scaffold61	TRF	Tandem_Repeat	289255	289288	52	+	.	.
scaffold61	subtractBed	intrn	397547	397627	.	-	.	Parent=CGI_10016361;
	scaffold61	TRF	Tandem_Repeat	397547	397627	114	+	.	.
scaffold61	subtractBed	intrn	443946	443977	.	-	.	Parent=CGI_10016365;
	scaffold61	TRF	Tandem_Repeat	443946	443977	64	+	.	.
scaffold61	subtractBed	intrn	444320	444346	.	-	.	Parent=CGI_10016365;
	scaffold61	TRF	Tandem_Repeat	444320	444346	54	+	.	.
scaffold610	subtractBed	intrn	19540	19566	.	+	.	Parent=CGI_10021082;
	scaffold610	WUBlastX	DNA_hAT-Ac	19453	19566	100	+	.	.
scaffold610	subtractBed	intrn	103532	104194	.	+	.	Parent=CGI_10021088;
	scaffold610	TRF	Tandem_Repeat	103532	104194	995	+	.	.
scaffold610	subtractBed	intrn	105261	105521	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_Kolobok-IS4	105261	105521	56	-	.	.
scaffold610	subtractBed	intrn	105701	106018	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_IS4EU	105701	106018	94	-	.	.
scaffold610	subtractBed	intrn	105605	105919	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_Kolobok-IS4	105605	105919	48	-	.	.
scaffold610	subtractBed	intrn	104503	105033	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_IS4EU	104503	105033	310	+	.	.
scaffold610	subtractBed	intrn	105345	105563	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_IS4EU	105345	105563	86	-	.	.
scaffold610	subtractBed	intrn	105027	105155	.	+	.	Parent=CGI_10021088;
	scaffold610	WUBlastX	DNA_IS4EU	105027	105155	51	+	.	.
scaffold610	subtractBed	intrn	106610	106813	.	-	.	Parent=CGI_10021089;
	scaffold610	WUBlastX	DNA_Kolobok-IS4	106610	106813	24	-	.	.
scaffold610	subtractBed	intrn	129884	130237	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy	129884	130237	135	-	.	.
scaffold610	subtractBed	intrn	129884	130540	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy	129884	130540	69	-	.	.
scaffold610	subtractBed	intrn	129490	129825	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	129490	129825	99	-	.	.
scaffold610	subtractBed	intrn	129318	129509	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy	129318	129509	116	-	.	.
scaffold610	subtractBed	intrn	128880	129476	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy	128880	129476	85	-	.	.
scaffold610	subtractBed	intrn	128988	129476	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	128988	129476	152	-	.	.
scaffold610	subtractBed	intrn	129944	130372	.	+	.	Parent=CGI_10021092;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	129944	130372	198	-	.	.
scaffold610	subtractBed	intrn	200155	200182	.	-	.	Parent=CGI_10021098;
	scaffold610	TRF	Tandem_Repeat	200155	200182	56	+	.	.
scaffold610	subtractBed	intrn	202136	202186	.	-	.	Parent=CGI_10021098;
	scaffold610	TRF	Tandem_Repeat	202136	202186	93	+	.	.
scaffold610	subtractBed	intrn	210674	210723	.	+	.	Parent=CGI_10021099;
	scaffold610	TRF	Tandem_Repeat	210674	210723	100	+	.	.
scaffold610	subtractBed	intrn	239037	239354	.	+	.	Parent=CGI_10021102;
	scaffold610	WUBlastX	LINE_L2	239037	239354	79	-	.	.
scaffold610	subtractBed	intrn	239091	239360	.	+	.	Parent=CGI_10021102;
	scaffold610	WUBlastX	LINE_L2	239091	239360	132	-	.	.
scaffold610	subtractBed	intrn	280583	281212	.	+	.	Parent=CGI_10021107;
	scaffold610	WUBlastX	LTR_Ngaro	280583	281212	73	-	.	.
scaffold610	subtractBed	intrn	280742	281446	.	+	.	Parent=CGI_10021107;
	scaffold610	WUBlastX	LTR_Ngaro	280742	281446	216	-	.	.
scaffold610	subtractBed	intrn	279838	280491	.	+	.	Parent=CGI_10021107;
	scaffold610	WUBlastX	LTR_Ngaro	279838	280491	474	-	.	.
scaffold610	subtractBed	intrn	304483	304784	.	-	.	Parent=CGI_10021109;
	scaffold610	TRF	Tandem_Repeat	304483	304784	363	+	.	.
scaffold610	subtractBed	intrn	305333	305386	.	-	.	Parent=CGI_10021109;
	scaffold610	TRF	Tandem_Repeat	305333	305386	108	+	.	.
scaffold610	subtractBed	intrn	317128	317443	.	-	.	Parent=CGI_10021109;
	scaffold610	TRF	Tandem_Repeat	317128	317454	288	+	.	.
scaffold610	subtractBed	intrn	318364	318399	.	-	.	Parent=CGI_10021109;
	scaffold610	TRF	Tandem_Repeat	318364	318399	63	+	.	.
scaffold610	subtractBed	intrn	335614	335693	.	+	.	Parent=CGI_10021111;
	scaffold610	TRF	Tandem_Repeat	335614	335693	144	+	.	.
scaffold610	subtractBed	intrn	336359	336411	.	+	.	Parent=CGI_10021111;
	scaffold610	TRF	Tandem_Repeat	336359	336411	106	+	.	.
scaffold610	subtractBed	intrn	370137	370182	.	+	.	Parent=CGI_10021116;
	scaffold610	TRF	Tandem_Repeat	370137	370182	92	+	.	.
scaffold610	subtractBed	intrn	483740	483768	.	-	.	Parent=CGI_10021126;
	scaffold610	TRF	Tandem_Repeat	483740	483768	58	+	.	.
scaffold610	subtractBed	intrn	513311	513360	.	+	.	Parent=CGI_10021128;
	scaffold610	TRF	Tandem_Repeat	513311	513360	52	+	.	.
scaffold610	subtractBed	intrn	522208	522351	.	+	.	Parent=CGI_10021128;
	scaffold610	TRF	Tandem_Repeat	522208	522351	83	+	.	.
scaffold610	subtractBed	intrn	522217	522351	.	+	.	Parent=CGI_10021128;
	scaffold610	TRF	Tandem_Repeat	522217	522351	144	+	.	.
scaffold610	subtractBed	intrn	564051	564310	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	564051	564464	68	+	.	.
scaffold610	subtractBed	intrn	569223	569300	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	569223	569300	43	+	.	.
scaffold610	subtractBed	intrn	568220	568705	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	568220	568705	39	+	.	.
scaffold610	subtractBed	intrn	568894	569202	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	568894	569202	183	+	.	.
scaffold610	subtractBed	intrn	569350	569517	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	569350	569517	30	+	.	.
scaffold610	subtractBed	intrn	569410	569544	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	569410	569544	22	+	.	.
scaffold610	subtractBed	intrn	567158	568204	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	567158	568204	570	+	.	.
scaffold610	subtractBed	intrn	569223	569360	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	569223	569360	40	+	.	.
scaffold610	subtractBed	intrn	568756	569175	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	568756	569175	125	+	.	.
scaffold610	subtractBed	intrn	568603	569244	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	568603	569244	105	+	.	.
scaffold610	subtractBed	intrn	564354	564464	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy-Cigr	564051	564464	68	+	.	.
scaffold610	subtractBed	intrn	567206	568390	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	567206	568390	314	+	.	.
scaffold610	subtractBed	intrn	566828	568198	.	-	.	Parent=CGI_10021130;
	scaffold610	WUBlastX	LTR_Gypsy	566828	568198	388	+	.	.
scaffold610	subtractBed	intrn	570976	571021	.	-	.	Parent=CGI_10021131;
	scaffold610	TRF	Tandem_Repeat	570976	571021	83	+	.	.
scaffold610	subtractBed	intrn	572936	573037	.	-	.	Parent=CGI_10021131;
	scaffold610	TRF	Tandem_Repeat	572936	573037	132	+	.	.
scaffold610	subtractBed	intrn	572154	572672	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	DNA_Merlin	572154	572672	128	+	.	.
scaffold610	subtractBed	intrn	571719	571913	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	DNA_Merlin	571719	571913	33	+	.	.
scaffold610	subtractBed	intrn	571776	572000	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	DNA_Merlin	571776	572000	43	+	.	.
scaffold610	subtractBed	intrn	572244	572684	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	DNA_Merlin	572244	572684	153	+	.	.
scaffold610	subtractBed	intrn	584255	584650	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LTR_Gypsy	584255	584650	187	-	.	.
scaffold610	subtractBed	intrn	583437	583982	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LTR_Gypsy	583437	583982	52	-	.	.
scaffold610	subtractBed	intrn	583545	583982	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LTR_Gypsy	583545	583982	118	-	.	.
scaffold610	subtractBed	intrn	583945	584229	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LTR_Gypsy	583945	584229	30	-	.	.
scaffold610	subtractBed	intrn	584086	584319	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LTR_Gypsy	584086	584319	49	-	.	.
scaffold610	subtractBed	intrn	598022	598234	.	-	.	Parent=CGI_10021131;
	scaffold610	WUBlastX	LINE_RTE-X	598022	598234	48	-	.	.
scaffold612	subtractBed	intrn	115029	115063	.	-	.	Parent=CGI_10009463;
	scaffold612	TRF	Tandem_Repeat	115029	115063	70	+	.	.
scaffold612	subtractBed	intrn	136017	136066	.	+	.	Parent=CGI_10009465;
	scaffold612	TRF	Tandem_Repeat	136017	136066	100	+	.	.
scaffold612	subtractBed	intrn	141055	141080	.	-	.	Parent=CGI_10009466;
	scaffold612	TRF	Tandem_Repeat	141055	141080	52	+	.	.
scaffold612	subtractBed	intrn	151283	151408	.	+	.	Parent=CGI_10009467;
	scaffold612	WUBlastX	LINE_RTE-X	151283	151408	43	-	.	.
scaffold612	subtractBed	intrn	209501	209600	.	-	.	Parent=CGI_10009473;
	scaffold612	TRF	Tandem_Repeat	209501	209600	173	+	.	.
scaffold614	subtractBed	intrn	63639	63727	.	-	.	Parent=CGI_10016257;
	scaffold614	TRF	Tandem_Repeat	63639	63727	169	+	.	.
scaffold614	subtractBed	intrn	85128	85162	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	85128	85162	52	+	.	.
scaffold614	subtractBed	intrn	88087	88182	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	88087	88182	147	+	.	.
scaffold614	subtractBed	intrn	88116	88169	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	88116	88169	66	+	.	.
scaffold614	subtractBed	intrn	89285	89320	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	89285	89320	54	+	.	.
scaffold614	subtractBed	intrn	89405	89463	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	89405	89463	118	+	.	.
scaffold614	subtractBed	intrn	91766	92065	.	+	.	Parent=CGI_10016258;
	scaffold614	TRF	Tandem_Repeat	91737	92065	462	+	.	.
scaffold614	subtractBed	intrn	121041	121081	.	+	.	Parent=CGI_10016260;
	scaffold614	TRF	Tandem_Repeat	121041	121081	73	+	.	.
scaffold614	subtractBed	intrn	131251	131309	.	+	.	Parent=CGI_10016261;
	scaffold614	TRF	Tandem_Repeat	131251	131309	50	+	.	.
scaffold614	subtractBed	intrn	133080	133833	.	+	.	Parent=CGI_10016261;
	scaffold614	TRF	Tandem_Repeat	133080	133833	1204	+	.	.
scaffold614	subtractBed	intrn	204414	204455	.	+	.	Parent=CGI_10016263;
	scaffold614	TRF	Tandem_Repeat	204414	204455	50	+	.	.
scaffold614	subtractBed	intrn	215982	216019	.	+	.	Parent=CGI_10016263;
	scaffold614	TRF	Tandem_Repeat	215982	216019	67	+	.	.
scaffold614	subtractBed	intrn	222423	222473	.	+	.	Parent=CGI_10016263;
	scaffold614	TRF	Tandem_Repeat	222423	222473	102	+	.	.
scaffold614	subtractBed	intrn	240687	240716	.	-	.	Parent=CGI_10016265;
	scaffold614	TRF	Tandem_Repeat	240687	240716	51	+	.	.
scaffold614	subtractBed	intrn	243364	243424	.	-	.	Parent=CGI_10016265;
	scaffold614	TRF	Tandem_Repeat	243364	243424	95	+	.	.
scaffold614	subtractBed	intrn	243364	243427	.	-	.	Parent=CGI_10016265;
	scaffold614	TRF	Tandem_Repeat	243364	243427	83	+	.	.
scaffold614	subtractBed	intrn	256114	256160	.	-	.	Parent=CGI_10016265;
	scaffold614	TRF	Tandem_Repeat	256114	256160	94	+	.	.
scaffold614	subtractBed	intrn	262476	262513	.	-	.	Parent=CGI_10016266;
	scaffold614	TRF	Tandem_Repeat	262476	262513	51	+	.	.
scaffold614	subtractBed	intrn	329899	329945	.	-	.	Parent=CGI_10016268;
	scaffold614	TRF	Tandem_Repeat	329899	329945	78	+	.	.
scaffold614	subtractBed	intrn	343335	343337	.	-	.	Parent=CGI_10016269;
	scaffold614	WUBlastX	DNA_Harbinger	343116	343337	89	-	.	.
scaffold614	subtractBed	intrn	346016	346074	.	-	.	Parent=CGI_10016269;
	scaffold614	TRF	Tandem_Repeat	346016	346074	118	+	.	.
scaffold614	subtractBed	intrn	388091	388155	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	388091	388155	130	+	.	.
scaffold614	subtractBed	intrn	391114	391180	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	391114	391180	80	+	.	.
scaffold614	subtractBed	intrn	393638	393684	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	393638	393684	85	+	.	.
scaffold614	subtractBed	intrn	393873	393897	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	393873	393897	50	+	.	.
scaffold614	subtractBed	intrn	393895	393924	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	393895	393924	60	+	.	.
scaffold614	subtractBed	intrn	394419	394485	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	394419	394485	80	+	.	.
scaffold614	subtractBed	intrn	394776	394824	.	+	.	Parent=CGI_10016271;
	scaffold614	TRF	Tandem_Repeat	394776	394824	62	+	.	.
scaffold614	subtractBed	intrn	415862	415899	.	-	.	Parent=CGI_10016276;
	scaffold614	TRF	Tandem_Repeat	415862	415899	76	+	.	.
scaffold616	subtractBed	intrn	24207	24238	.	-	.	Parent=CGI_10015383;
	scaffold616	TRF	Tandem_Repeat	24207	24238	64	+	.	.
scaffold616	subtractBed	intrn	25182	27803	.	-	.	Parent=CGI_10015383;
	scaffold616	WUBlastX	LINE_RTE-X	25182	27803	821	-	.	.
scaffold616	subtractBed	intrn	24830	25156	.	-	.	Parent=CGI_10015383;
	scaffold616	WUBlastX	LINE_RTE-X	24830	25156	106	-	.	.
scaffold616	subtractBed	intrn	34887	34930	.	-	.	Parent=CGI_10015383;
	scaffold616	TRF	Tandem_Repeat	34887	34930	88	+	.	.
scaffold616	subtractBed	intrn	58197	58244	.	+	.	Parent=CGI_10015384;
	scaffold616	TRF	Tandem_Repeat	58197	58244	55	+	.	.
scaffold616	subtractBed	intrn	83266	84049	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	83266	84049	986	+	.	.
scaffold616	subtractBed	intrn	83267	84437	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	83267	84437	1030	+	.	.
scaffold616	subtractBed	intrn	83266	84049	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	83266	84049	1127	+	.	.
scaffold616	subtractBed	intrn	84138	84437	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	84138	84437	215	+	.	.
scaffold616	subtractBed	intrn	84151	84456	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	84151	84456	464	+	.	.
scaffold616	subtractBed	intrn	100363	100746	.	-	.	Parent=CGI_10015386;
	scaffold616	TRF	Tandem_Repeat	100363	100746	430	+	.	.
scaffold616	subtractBed	intrn	100363	100746	.	+	.	Parent=CGI_10015388;
	scaffold616	TRF	Tandem_Repeat	100363	100746	430	+	.	.
scaffold616	subtractBed	intrn	128107	128604	.	+	.	Parent=CGI_10015389;
	scaffold616	WUBlastX	LINE_L1-Tx1	128107	128604	206	+	.	.
scaffold616	subtractBed	intrn	128071	128757	.	+	.	Parent=CGI_10015389;
	scaffold616	WUBlastX	LINE_L1-Tx1	128071	128757	196	+	.	.
scaffold616	subtractBed	intrn	128140	128868	.	+	.	Parent=CGI_10015389;
	scaffold616	WUBlastX	LINE_L1-Tx1	128140	128868	81	+	.	.
scaffold616	subtractBed	intrn	133923	134026	.	+	.	Parent=CGI_10015389;
	scaffold616	TRF	Tandem_Repeat	133923	134026	100	+	.	.
scaffold616	subtractBed	intrn	185953	186439	.	+	.	Parent=CGI_10015392;
	scaffold616	TRF	Tandem_Repeat	185953	186439	929	+	.	.
scaffold616	subtractBed	intrn	185977	186091	.	+	.	Parent=CGI_10015392;
	scaffold616	TRF	Tandem_Repeat	185977	186091	66	+	.	.
scaffold616	subtractBed	intrn	197041	197082	.	-	.	Parent=CGI_10015393;
	scaffold616	TRF	Tandem_Repeat	197041	197082	84	+	.	.
scaffold616	subtractBed	intrn	210551	210600	.	+	.	Parent=CGI_10015394;
	scaffold616	TRF	Tandem_Repeat	210551	210600	100	+	.	.
scaffold616	subtractBed	intrn	214392	214590	.	+	.	Parent=CGI_10015395;
	scaffold616	TRF	Tandem_Repeat	214392	214590	317	+	.	.
scaffold616	subtractBed	intrn	214469	214569	.	+	.	Parent=CGI_10015395;
	scaffold616	TRF	Tandem_Repeat	214469	214569	85	+	.	.
scaffold616	subtractBed	intrn	225491	226490	.	-	.	Parent=CGI_10015396;
	scaffold616	TRF	Tandem_Repeat	225491	226490	1346	+	.	.
scaffold616	subtractBed	intrn	227895	228311	.	-	.	Parent=CGI_10015396;
	scaffold616	TRF	Tandem_Repeat	227888	228311	683	+	.	.
scaffold616	subtractBed	intrn	229089	229292	.	-	.	Parent=CGI_10015396;
	scaffold616	TRF	Tandem_Repeat	229089	229292	241	+	.	.
scaffold616	subtractBed	intrn	230308	230345	.	-	.	Parent=CGI_10015396;
	scaffold616	TRF	Tandem_Repeat	230308	230345	67	+	.	.
scaffold616	subtractBed	intrn	237259	238233	.	-	.	Parent=CGI_10015397;
	scaffold616	TRF	Tandem_Repeat	237259	238285	1414	+	.	.
scaffold616	subtractBed	intrn	240199	240248	.	-	.	Parent=CGI_10015397;
	scaffold616	TRF	Tandem_Repeat	240199	240248	100	+	.	.
scaffold616	subtractBed	intrn	240410	242267	.	-	.	Parent=CGI_10015397;
	scaffold616	TRF	Tandem_Repeat	240410	242267	2791	+	.	.
scaffold616	subtractBed	intrn	243228	243408	.	-	.	Parent=CGI_10015397;
	scaffold616	TRF	Tandem_Repeat	243228	243408	263	+	.	.
scaffold616	subtractBed	intrn	247021	247119	.	-	.	Parent=CGI_10015398;
	scaffold616	TRF	Tandem_Repeat	247021	247119	107	+	.	.
scaffold616	subtractBed	intrn	247004	247107	.	-	.	Parent=CGI_10015398;
	scaffold616	TRF	Tandem_Repeat	247004	247107	144	+	.	.
scaffold616	subtractBed	intrn	247004	247119	.	-	.	Parent=CGI_10015398;
	scaffold616	TRF	Tandem_Repeat	247004	247119	124	+	.	.
scaffold616	subtractBed	intrn	247021	247115	.	-	.	Parent=CGI_10015398;
	scaffold616	TRF	Tandem_Repeat	247021	247115	145	+	.	.
scaffold616	subtractBed	intrn	248399	248673	.	-	.	Parent=CGI_10015398;
	scaffold616	TRF	Tandem_Repeat	248399	248673	442	+	.	.
scaffold616	subtractBed	intrn	266720	266773	.	-	.	Parent=CGI_10015400;
	scaffold616	TRF	Tandem_Repeat	266720	266773	108	+	.	.
scaffold616	subtractBed	intrn	269925	269976	.	-	.	Parent=CGI_10015400;
	scaffold616	TRF	Tandem_Repeat	269925	269976	104	+	.	.
scaffold616	subtractBed	intrn	303202	303254	.	-	.	Parent=CGI_10015401;
	scaffold616	TRF	Tandem_Repeat	303202	303254	99	+	.	.
scaffold616	subtractBed	intrn	308943	308999	.	+	.	Parent=CGI_10015402;
	scaffold616	TRF	Tandem_Repeat	308943	308999	78	+	.	.
scaffold616	subtractBed	intrn	308943	308999	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	308943	308999	78	+	.	.
scaffold616	subtractBed	intrn	311980	312105	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	311980	312105	216	+	.	.
scaffold616	subtractBed	intrn	313313	313484	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	313313	313484	214	+	.	.
scaffold616	subtractBed	intrn	316097	316154	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	316097	316154	116	+	.	.
scaffold616	subtractBed	intrn	320863	320939	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	320863	320939	129	+	.	.
scaffold616	subtractBed	intrn	317263	317913	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	317263	317913	309	+	.	.
scaffold616	subtractBed	intrn	314635	315513	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	314635	315513	338	+	.	.
scaffold616	subtractBed	intrn	314416	315192	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	314416	315192	190	+	.	.
scaffold616	subtractBed	intrn	314635	316053	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	314635	316053	309	+	.	.
scaffold616	subtractBed	intrn	316629	316673	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	316629	316673	30	+	.	.
scaffold616	subtractBed	intrn	316661	317218	.	-	.	Parent=CGI_10015403;
	scaffold616	WUBlastX	LINE_RTE-BovB	316661	317218	422	+	.	.
scaffold616	subtractBed	intrn	325588	325633	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	325588	325633	65	+	.	.
scaffold616	subtractBed	intrn	325671	325716	.	-	.	Parent=CGI_10015403;
	scaffold616	TRF	Tandem_Repeat	325671	325716	92	+	.	.
scaffold616	subtractBed	intrn	337401	337469	.	-	.	Parent=CGI_10015404;
	scaffold616	TRF	Tandem_Repeat	337401	337469	120	+	.	.
scaffold616	subtractBed	intrn	337398	337469	.	-	.	Parent=CGI_10015404;
	scaffold616	TRF	Tandem_Repeat	337398	337469	90	+	.	.
scaffold616	subtractBed	intrn	356246	356278	.	+	.	Parent=CGI_10015407;
	scaffold616	TRF	Tandem_Repeat	356246	356278	66	+	.	.
scaffold616	subtractBed	intrn	356827	356889	.	+	.	Parent=CGI_10015407;
	scaffold616	TRF	Tandem_Repeat	356827	356889	126	+	.	.
scaffold616	subtractBed	intrn	407455	407955	.	-	.	Parent=CGI_10015408;
	scaffold616	WUBlastX	DNA_PiggyBac	407455	407955	117	-	.	.
scaffold616	subtractBed	intrn	407479	407826	.	-	.	Parent=CGI_10015408;
	scaffold616	WUBlastX	DNA_PiggyBac	407479	407826	181	-	.	.
scaffold616	subtractBed	intrn	420001	420063	.	-	.	Parent=CGI_10015408;
	scaffold616	TRF	Tandem_Repeat	420001	420063	81	+	.	.
scaffold617	subtractBed	intrn	127228	127299	.	-	.	Parent=CGI_10012725;
	scaffold617	WUBlastX	DNA_hAT-Ac	127228	127299	33	-	.	.
scaffold617	subtractBed	intrn	128440	128769	.	-	.	Parent=CGI_10012725;
	scaffold617	WUBlastX	DNA_hAT	128440	128769	69	-	.	.
scaffold617	subtractBed	intrn	149218	149305	.	-	.	Parent=CGI_10012727;
	scaffold617	TRF	Tandem_Repeat	149218	149305	104	+	.	.
scaffold617	subtractBed	intrn	149697	149886	.	-	.	Parent=CGI_10012727;
	scaffold617	TRF	Tandem_Repeat	149697	149886	227	+	.	.
scaffold617	subtractBed	intrn	149971	150057	.	-	.	Parent=CGI_10012727;
	scaffold617	TRF	Tandem_Repeat	149971	150057	88	+	.	.
scaffold617	subtractBed	intrn	150131	150312	.	-	.	Parent=CGI_10012727;
	scaffold617	TRF	Tandem_Repeat	150131	150312	91	+	.	.
scaffold617	subtractBed	intrn	150328	150541	.	-	.	Parent=CGI_10012727;
	scaffold617	TRF	Tandem_Repeat	150328	150541	205	+	.	.
scaffold617	subtractBed	intrn	179317	179359	.	-	.	Parent=CGI_10012729;
	scaffold617	TRF	Tandem_Repeat	179317	179359	54	+	.	.
scaffold617	subtractBed	intrn	183904	183935	.	-	.	Parent=CGI_10012729;
	scaffold617	TRF	Tandem_Repeat	183904	183935	55	+	.	.
scaffold617	subtractBed	intrn	242934	243824	.	-	.	Parent=CGI_10012734;
	scaffold617	TRF	Tandem_Repeat	242934	243849	1481	+	.	.
scaffold617	subtractBed	intrn	277762	278016	.	+	.	Parent=CGI_10012737;
	scaffold617	WUBlastX	LINE_CR1	277762	278016	87	-	.	.
scaffold617	subtractBed	intrn	287882	288109	.	+	.	Parent=CGI_10012737;
	scaffold617	TRF	Tandem_Repeat	287866	288109	226	+	.	.
scaffold617	subtractBed	intrn	302754	303633	.	-	.	Parent=CGI_10012738;
	scaffold617	TRF	Tandem_Repeat	302754	303633	615	+	.	.
scaffold617	subtractBed	intrn	303176	304113	.	-	.	Parent=CGI_10012738;
	scaffold617	TRF	Tandem_Repeat	303176	304113	355	+	.	.
scaffold619	subtractBed	intrn	67137	67286	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	67137	67286	255	+	.	.
scaffold619	subtractBed	intrn	90094	90346	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	90094	90346	143	+	.	.
scaffold619	subtractBed	intrn	90091	90482	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	90091	90482	201	+	.	.
scaffold619	subtractBed	intrn	90230	90477	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	90230	90477	203	+	.	.
scaffold619	subtractBed	intrn	91546	91879	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	91546	91879	237	+	.	.
scaffold619	subtractBed	intrn	91546	91879	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	91546	91879	288	+	.	.
scaffold619	subtractBed	intrn	91582	91881	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	91582	91881	224	+	.	.
scaffold619	subtractBed	intrn	91546	91882	.	+	.	Parent=CGI_10025753;
	scaffold619	TRF	Tandem_Repeat	91546	91882	225	+	.	.
scaffold619	subtractBed	intrn	137238	137273	.	-	.	Parent=CGI_10025755;
	scaffold619	TRF	Tandem_Repeat	137238	137273	56	+	.	.
scaffold619	subtractBed	intrn	137234	137275	.	-	.	Parent=CGI_10025755;
	scaffold619	TRF	Tandem_Repeat	137234	137275	59	+	.	.
scaffold619	subtractBed	intrn	143165	143211	.	-	.	Parent=CGI_10025755;
	scaffold619	TRF	Tandem_Repeat	143165	143211	76	+	.	.
scaffold619	subtractBed	intrn	146389	146487	.	-	.	Parent=CGI_10025755;
	scaffold619	WUBlastX	LINE_Jockey	146389	146487	20	-	.	.
scaffold619	subtractBed	intrn	145152	145508	.	-	.	Parent=CGI_10025755;
	scaffold619	WUBlastX	LINE_Jockey	145152	145508	27	-	.	.
scaffold619	subtractBed	intrn	144633	145454	.	-	.	Parent=CGI_10025755;
	scaffold619	WUBlastX	LINE_RTE-X	144633	145454	441	-	.	.
scaffold619	subtractBed	intrn	143876	144619	.	-	.	Parent=CGI_10025755;
	scaffold619	WUBlastX	LINE_RTE-X	143876	144619	183	-	.	.
scaffold619	subtractBed	intrn	146245	146328	.	-	.	Parent=CGI_10025755;
	scaffold619	WUBlastX	LINE_L2	146245	146328	25	-	.	.
scaffold619	subtractBed	intrn	151581	151620	.	-	.	Parent=CGI_10025755;
	scaffold619	TRF	Tandem_Repeat	151581	151620	62	+	.	.
scaffold619	subtractBed	intrn	161068	161103	.	-	.	Parent=CGI_10025755;
	scaffold619	TRF	Tandem_Repeat	161068	161103	72	+	.	.
scaffold619	subtractBed	intrn	206009	206066	.	-	.	Parent=CGI_10025758;
	scaffold619	TRF	Tandem_Repeat	206009	206066	116	+	.	.
scaffold619	subtractBed	intrn	227082	227109	.	+	.	Parent=CGI_10025760;
	scaffold619	TRF	Tandem_Repeat	227082	227109	56	+	.	.
scaffold619	subtractBed	intrn	276943	277008	.	-	.	Parent=CGI_10025763;
	scaffold619	TRF	Tandem_Repeat	276943	277008	89	+	.	.
scaffold619	subtractBed	intrn	277178	278694	.	-	.	Parent=CGI_10025763;
	scaffold619	TRF	Tandem_Repeat	277178	278694	2153	+	.	.
scaffold619	subtractBed	intrn	277178	278710	.	-	.	Parent=CGI_10025763;
	scaffold619	TRF	Tandem_Repeat	277178	278710	2194	+	.	.
scaffold619	subtractBed	intrn	280818	280871	.	-	.	Parent=CGI_10025763;
	scaffold619	TRF	Tandem_Repeat	280818	280871	108	+	.	.
scaffold619	subtractBed	intrn	310714	310903	.	+	.	Parent=CGI_10025765;
	scaffold619	TRF	Tandem_Repeat	310714	310903	186	+	.	.
scaffold619	subtractBed	intrn	338555	338593	.	+	.	Parent=CGI_10025769;
	scaffold619	TRF	Tandem_Repeat	338555	338593	78	+	.	.
scaffold619	subtractBed	intrn	342269	342299	.	+	.	Parent=CGI_10025769;
	scaffold619	TRF	Tandem_Repeat	342269	342299	62	+	.	.
scaffold619	subtractBed	intrn	350338	350440	.	+	.	Parent=CGI_10025769;
	scaffold619	TRF	Tandem_Repeat	350338	350440	188	+	.	.
scaffold619	subtractBed	intrn	395315	395345	.	+	.	Parent=CGI_10025770;
	scaffold619	TRF	Tandem_Repeat	395315	395345	62	+	.	.
scaffold619	subtractBed	intrn	401387	401429	.	+	.	Parent=CGI_10025770;
	scaffold619	TRF	Tandem_Repeat	401387	401429	50	+	.	.
scaffold619	subtractBed	intrn	420440	420507	.	+	.	Parent=CGI_10025771;
	scaffold619	TRF	Tandem_Repeat	420440	420507	136	+	.	.
scaffold619	subtractBed	intrn	422285	422394	.	+	.	Parent=CGI_10025771;
	scaffold619	TRF	Tandem_Repeat	422285	422394	211	+	.	.
scaffold619	subtractBed	intrn	482748	482845	.	+	.	Parent=CGI_10025773;
	scaffold619	TRF	Tandem_Repeat	482748	482845	81	+	.	.
scaffold619	subtractBed	intrn	486234	486398	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Hobo	486234	486398	68	-	.	.
scaffold619	subtractBed	intrn	487683	487751	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	487683	487751	24	-	.	.
scaffold619	subtractBed	intrn	484218	484787	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	484218	484787	81	-	.	.
scaffold619	subtractBed	intrn	481715	482002	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	481715	482002	56	-	.	.
scaffold619	subtractBed	intrn	484793	485029	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	484793	485029	156	-	.	.
scaffold619	subtractBed	intrn	483292	483714	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	483292	483714	69	-	.	.
scaffold619	subtractBed	intrn	487930	488070	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	487930	488070	27	-	.	.
scaffold619	subtractBed	intrn	484356	484790	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	484356	484790	84	-	.	.
scaffold619	subtractBed	intrn	487963	488073	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	487963	488073	53	-	.	.
scaffold619	subtractBed	intrn	483385	483930	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	483385	483930	95	-	.	.
scaffold619	subtractBed	intrn	487161	487574	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Tip100	487161	487574	71	-	.	.
scaffold619	subtractBed	intrn	485379	485759	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	485379	485759	95	-	.	.
scaffold619	subtractBed	intrn	486264	487511	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	486264	487511	257	-	.	.
scaffold619	subtractBed	intrn	487615	487692	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	487615	487692	39	-	.	.
scaffold619	subtractBed	intrn	488220	488606	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	488220	488606	87	-	.	.
scaffold619	subtractBed	intrn	485316	485726	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	485316	485726	50	-	.	.
scaffold619	subtractBed	intrn	483837	483980	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	483837	483980	47	-	.	.
scaffold619	subtractBed	intrn	483858	484256	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	LTR_Ngaro	483858	484256	22	-	.	.
scaffold619	subtractBed	intrn	487692	487925	.	+	.	Parent=CGI_10025773;
	scaffold619	WUBlastX	DNA_hAT-Ac	487692	487925	20	-	.	.
scaffold619	subtractBed	intrn	492042	492089	.	+	.	Parent=CGI_10025773;
	scaffold619	TRF	Tandem_Repeat	492042	492089	51	+	.	.
scaffold619	subtractBed	intrn	492047	492096	.	+	.	Parent=CGI_10025773;
	scaffold619	TRF	Tandem_Repeat	492047	492096	73	+	.	.
scaffold619	subtractBed	intrn	492051	492096	.	+	.	Parent=CGI_10025773;
	scaffold619	TRF	Tandem_Repeat	492051	492096	56	+	.	.
scaffold619	subtractBed	intrn	492120	493110	.	+	.	Parent=CGI_10025773;
	scaffold619	TRF	Tandem_Repeat	492120	493110	1486	+	.	.
scaffold619	subtractBed	intrn	563624	563629	.	-	.	Parent=CGI_10025775;
	scaffold619	WUBlastX	DNA_IS4EU	563624	564013	72	-	.	.
scaffold619	subtractBed	intrn	717731	717973	.	+	.	Parent=CGI_10025782;
	scaffold619	TRF	Tandem_Repeat	717731	717973	387	+	.	.
scaffold619	subtractBed	intrn	721080	721135	.	+	.	Parent=CGI_10025782;
	scaffold619	TRF	Tandem_Repeat	721080	721135	112	+	.	.
scaffold619	subtractBed	intrn	745837	745845	.	+	.	Parent=CGI_10025783;
	scaffold619	WUBlastX	DNA_hAT	745837	747360	277	+	.	.
scaffold619	subtractBed	intrn	778918	779232	.	-	.	Parent=CGI_10025785;
	scaffold619	WUBlastX	LINE_RTE-X	778918	779232	154	-	.	.
scaffold619	subtractBed	intrn	779265	779498	.	-	.	Parent=CGI_10025785;
	scaffold619	WUBlastX	LINE_RTE-X	779265	779498	42	-	.	.
scaffold619	subtractBed	intrn	778840	779217	.	-	.	Parent=CGI_10025785;
	scaffold619	WUBlastX	LINE_RTE-X	778840	779217	118	-	.	.
scaffold619	subtractBed	intrn	784129	784174	.	-	.	Parent=CGI_10025785;
	scaffold619	TRF	Tandem_Repeat	784129	784174	74	+	.	.
scaffold619	subtractBed	intrn	784129	784174	.	+	.	Parent=CGI_10025786;
	scaffold619	TRF	Tandem_Repeat	784129	784174	74	+	.	.
scaffold619	subtractBed	intrn	861357	861435	.	-	.	Parent=CGI_10025788;
	scaffold619	TRF	Tandem_Repeat	861357	861435	158	+	.	.
scaffold619	subtractBed	intrn	874958	875068	.	-	.	Parent=CGI_10025790;
	scaffold619	WUBlastX	DNA_MuDR	874958	875068	32	-	.	.
scaffold619	subtractBed	intrn	874895	875068	.	-	.	Parent=CGI_10025790;
	scaffold619	WUBlastX	DNA_MuDR	874895	875068	20	-	.	.
scaffold619	subtractBed	intrn	875302	875658	.	-	.	Parent=CGI_10025790;
	scaffold619	WUBlastX	DNA_MuDR	875302	875658	153	-	.	.
scaffold619	subtractBed	intrn	876091	876391	.	-	.	Parent=CGI_10025790;
	scaffold619	TRF	Tandem_Repeat	876091	876391	409	+	.	.
scaffold619	subtractBed	intrn	876901	877496	.	-	.	Parent=CGI_10025790;
	scaffold619	TRF	Tandem_Repeat	876901	877496	704	+	.	.
scaffold619	subtractBed	intrn	875957	876022	.	-	.	Parent=CGI_10025790;
	scaffold619	WUBlastX	DNA_MuDR	875957	876022	20	-	.	.
scaffold619	subtractBed	intrn	956980	957120	.	-	.	Parent=CGI_10025794;
	scaffold619	TRF	Tandem_Repeat	956980	957120	89	+	.	.
scaffold619	subtractBed	intrn	950997	952025	.	-	.	Parent=CGI_10025794;
	scaffold619	WUBlastX	DNA_hAT-hATw	950997	952025	43	+	.	.
scaffold619	subtractBed	intrn	952227	953405	.	-	.	Parent=CGI_10025794;
	scaffold619	WUBlastX	DNA_hAT-hATw	952227	953405	254	+	.	.
scaffold619	subtractBed	intrn	951909	953348	.	-	.	Parent=CGI_10025794;
	scaffold619	WUBlastX	DNA_hAT-hATw	951909	953348	213	+	.	.
scaffold619	subtractBed	intrn	951324	952010	.	-	.	Parent=CGI_10025794;
	scaffold619	WUBlastX	DNA_hAT-hATw	951324	952010	106	+	.	.
scaffold619	subtractBed	intrn	992404	992431	.	+	.	Parent=CGI_10025795;
	scaffold619	TRF	Tandem_Repeat	992404	992431	56	+	.	.
scaffold619	subtractBed	intrn	1001354	1001534	.	+	.	Parent=CGI_10025795;
	scaffold619	TRF	Tandem_Repeat	1001354	1001534	202	+	.	.
scaffold619	subtractBed	intrn	1048060	1048311	.	-	.	Parent=CGI_10025798;
	scaffold619	WUBlastX	LTR_Gypsy	1048060	1048311	24	-	.	.
scaffold619	subtractBed	intrn	1071479	1071661	.	-	.	Parent=CGI_10025801;
	scaffold619	WUBlastX	LTR_Gypsy	1071479	1071661	33	-	.	.
scaffold619	subtractBed	intrn	1072833	1072855	.	-	.	Parent=CGI_10025801;
	scaffold619	WUBlastX	LTR_Gypsy	1072833	1072991	23	-	.	.
scaffold619	subtractBed	intrn	1083784	1083814	.	-	.	Parent=CGI_10025803;
	scaffold619	TRF	Tandem_Repeat	1083784	1083814	62	+	.	.
scaffold619	subtractBed	intrn	1083472	1083654	.	-	.	Parent=CGI_10025803;
	scaffold619	WUBlastX	LTR_Gypsy	1083472	1083654	39	-	.	.
scaffold62	subtractBed	intrn	23210	23467	.	-	.	Parent=CGI_10015703;
	scaffold62	WUBlastX	LTR_DIRS	23210	23467	112	+	.	.
scaffold62	subtractBed	intrn	148536	149660	.	-	.	Parent=CGI_10015706;
	scaffold62	TRF	Tandem_Repeat	148536	149660	1675	+	.	.
scaffold62	subtractBed	intrn	160650	160790	.	-	.	Parent=CGI_10015707;
	scaffold62	TRF	Tandem_Repeat	160650	160790	120	+	.	.
scaffold62	subtractBed	intrn	194161	194227	.	-	.	Parent=CGI_10015710;
	scaffold62	TRF	Tandem_Repeat	194161	194227	89	+	.	.
scaffold62	subtractBed	intrn	196467	196533	.	-	.	Parent=CGI_10015710;
	scaffold62	TRF	Tandem_Repeat	196467	196533	71	+	.	.
scaffold62	subtractBed	intrn	206647	207437	.	-	.	Parent=CGI_10015712;
	scaffold62	TRF	Tandem_Repeat	206647	207437	960	+	.	.
scaffold62	subtractBed	intrn	207608	207638	.	-	.	Parent=CGI_10015712;
	scaffold62	TRF	Tandem_Repeat	207608	207638	53	+	.	.
scaffold62	subtractBed	intrn	235122	235146	.	-	.	Parent=CGI_10015713;
	scaffold62	TRF	Tandem_Repeat	235122	235146	50	+	.	.
scaffold62	subtractBed	intrn	238298	238370	.	-	.	Parent=CGI_10015713;
	scaffold62	TRF	Tandem_Repeat	238298	238370	66	+	.	.
scaffold62	subtractBed	intrn	406483	406509	.	+	.	Parent=CGI_10015722;
	scaffold62	TRF	Tandem_Repeat	406483	406509	54	+	.	.
scaffold62	subtractBed	intrn	409784	409850	.	+	.	Parent=CGI_10015722;
	scaffold62	TRF	Tandem_Repeat	409784	409850	98	+	.	.
scaffold62	subtractBed	intrn	410631	410695	.	+	.	Parent=CGI_10015722;
	scaffold62	TRF	Tandem_Repeat	410631	410695	112	+	.	.
scaffold621	subtractBed	intrn	71765	71800	.	-	.	Parent=CGI_10017670;
	scaffold621	TRF	Tandem_Repeat	71765	71800	72	+	.	.
scaffold621	subtractBed	intrn	72006	72034	.	-	.	Parent=CGI_10017670;
	scaffold621	TRF	Tandem_Repeat	72006	72034	58	+	.	.
scaffold621	subtractBed	intrn	75590	75649	.	-	.	Parent=CGI_10017670;
	scaffold621	TRF	Tandem_Repeat	75590	75649	120	+	.	.
scaffold621	subtractBed	intrn	78158	78274	.	-	.	Parent=CGI_10017670;
	scaffold621	TRF	Tandem_Repeat	78158	78274	83	+	.	.
scaffold621	subtractBed	intrn	78274	78412	.	-	.	Parent=CGI_10017670;
	scaffold621	TRF	Tandem_Repeat	78274	78412	116	+	.	.
scaffold621	subtractBed	intrn	72300	72998	.	-	.	Parent=CGI_10017670;
	scaffold621	WUBlastX	LINE_RTE-X	72300	72998	115	-	.	.
scaffold621	subtractBed	intrn	133781	133835	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	133781	133835	103	+	.	.
scaffold621	subtractBed	intrn	151982	153964	.	+	.	Parent=CGI_10017672;
	scaffold621	WUBlastX	LTR_DIRS	151982	153964	782	-	.	.
scaffold621	subtractBed	intrn	151191	152090	.	+	.	Parent=CGI_10017672;
	scaffold621	WUBlastX	LTR_DIRS	151191	152090	389	-	.	.
scaffold621	subtractBed	intrn	152324	154046	.	+	.	Parent=CGI_10017672;
	scaffold621	WUBlastX	LTR_DIRS	152324	154069	907	-	.	.
scaffold621	subtractBed	intrn	153332	154046	.	+	.	Parent=CGI_10017672;
	scaffold621	WUBlastX	LTR_Gypsy	153332	154258	27	-	.	.
scaffold621	subtractBed	intrn	164676	164728	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	164676	164728	106	+	.	.
scaffold621	subtractBed	intrn	189470	189711	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	189470	189711	430	+	.	.
scaffold621	subtractBed	intrn	192898	192951	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	192898	192951	92	+	.	.
scaffold621	subtractBed	intrn	204692	204741	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	204692	204741	100	+	.	.
scaffold621	subtractBed	intrn	212237	212331	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	212237	212331	118	+	.	.
scaffold621	subtractBed	intrn	212355	213146	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	212355	213146	1126	+	.	.
scaffold621	subtractBed	intrn	234840	235315	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	234840	235315	653	+	.	.
scaffold621	subtractBed	intrn	235232	235318	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	235232	235318	59	+	.	.
scaffold621	subtractBed	intrn	235331	235399	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	235331	235399	57	+	.	.
scaffold621	subtractBed	intrn	234852	235405	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	234852	235405	508	+	.	.
scaffold621	subtractBed	intrn	235150	235403	.	+	.	Parent=CGI_10017672;
	scaffold621	TRF	Tandem_Repeat	235150	235403	199	+	.	.
scaffold621	subtractBed	intrn	244099	244170	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	244099	244170	74	+	.	.
scaffold621	subtractBed	intrn	244102	244170	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	244102	244170	77	+	.	.
scaffold621	subtractBed	intrn	244102	244169	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	244102	244169	70	+	.	.
scaffold621	subtractBed	intrn	244103	244170	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	244103	244170	63	+	.	.
scaffold621	subtractBed	intrn	253537	253585	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	253537	253585	98	+	.	.
scaffold621	subtractBed	intrn	258810	258873	.	-	.	Parent=CGI_10017676;
	scaffold621	TRF	Tandem_Repeat	258810	258873	128	+	.	.
scaffold621	subtractBed	intrn	283759	283850	.	-	.	Parent=CGI_10017677;
	scaffold621	TRF	Tandem_Repeat	283759	283850	53	+	.	.
scaffold621	subtractBed	intrn	291166	291220	.	-	.	Parent=CGI_10017677;
	scaffold621	TRF	Tandem_Repeat	291166	291220	110	+	.	.
scaffold621	subtractBed	intrn	299344	299428	.	-	.	Parent=CGI_10017677;
	scaffold621	TRF	Tandem_Repeat	299344	299428	161	+	.	.
scaffold621	subtractBed	intrn	302301	302333	.	-	.	Parent=CGI_10017677;
	scaffold621	TRF	Tandem_Repeat	302301	302333	66	+	.	.
scaffold621	subtractBed	intrn	306271	306684	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	306271	306684	70	+	.	.
scaffold621	subtractBed	intrn	304796	306352	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	304796	306352	1128	+	.	.
scaffold621	subtractBed	intrn	303940	304509	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	303940	304509	209	+	.	.
scaffold621	subtractBed	intrn	303877	304749	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	303877	304749	75	+	.	.
scaffold621	subtractBed	intrn	304087	304563	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	304087	304563	223	+	.	.
scaffold621	subtractBed	intrn	303778	304539	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	LTR_Ngaro	303778	304539	143	+	.	.
scaffold621	subtractBed	intrn	314190	314242	.	-	.	Parent=CGI_10017677;
	scaffold621	TRF	Tandem_Repeat	314190	314242	55	+	.	.
scaffold621	subtractBed	intrn	314683	315774	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	DNA_Academ	314683	315774	536	-	.	.
scaffold621	subtractBed	intrn	315804	316538	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	DNA_Academ	315804	316538	225	-	.	.
scaffold621	subtractBed	intrn	316211	316538	.	-	.	Parent=CGI_10017677;
	scaffold621	WUBlastX	DNA_Academ	316211	316969	149	-	.	.
scaffold621	subtractBed	intrn	360524	360820	.	-	.	Parent=CGI_10017688;
	scaffold621	WUBlastX	LTR_DIRS	360524	360820	66	-	.	.
scaffold621	subtractBed	intrn	360825	360995	.	-	.	Parent=CGI_10017688;
	scaffold621	WUBlastX	LTR_DIRS	360825	360995	52	-	.	.
scaffold621	subtractBed	intrn	360334	360450	.	-	.	Parent=CGI_10017688;
	scaffold621	WUBlastX	LTR_DIRS	360334	360450	41	-	.	.
scaffold621	subtractBed	intrn	360334	360546	.	-	.	Parent=CGI_10017688;
	scaffold621	WUBlastX	LTR_DIRS	360334	360546	35	-	.	.
scaffold621	subtractBed	intrn	371842	372505	.	-	.	Parent=CGI_10017688;
	scaffold621	TRF	Tandem_Repeat	371842	372505	729	+	.	.
scaffold621	subtractBed	intrn	374185	374235	.	-	.	Parent=CGI_10017688;
	scaffold621	TRF	Tandem_Repeat	374185	374235	68	+	.	.
scaffold621	subtractBed	intrn	374177	374218	.	-	.	Parent=CGI_10017688;
	scaffold621	TRF	Tandem_Repeat	374177	374218	57	+	.	.
scaffold621	subtractBed	intrn	374177	374227	.	-	.	Parent=CGI_10017688;
	scaffold621	TRF	Tandem_Repeat	374177	374227	75	+	.	.
scaffold621	subtractBed	intrn	375221	375255	.	-	.	Parent=CGI_10017688;
	scaffold621	TRF	Tandem_Repeat	375221	375255	70	+	.	.
scaffold621	subtractBed	intrn	458525	458573	.	-	.	Parent=CGI_10017690;
	scaffold621	TRF	Tandem_Repeat	458525	458573	64	+	.	.
scaffold621	subtractBed	intrn	471472	471506	.	+	.	Parent=CGI_10017691;
	scaffold621	TRF	Tandem_Repeat	471472	471506	70	+	.	.
scaffold621	subtractBed	intrn	473778	473824	.	+	.	Parent=CGI_10017691;
	scaffold621	TRF	Tandem_Repeat	473778	473824	94	+	.	.
scaffold622	subtractBed	intrn	2092	2124	.	+	.	Parent=CGI_10018188;
	scaffold622	TRF	Tandem_Repeat	2092	2124	50	+	.	.
scaffold622	subtractBed	intrn	53566	53602	.	-	.	Parent=CGI_10018190;
	scaffold622	TRF	Tandem_Repeat	53566	53602	74	+	.	.
scaffold622	subtractBed	intrn	77576	78075	.	-	.	Parent=CGI_10018191;
	scaffold622	TRF	Tandem_Repeat	77576	78075	826	+	.	.
scaffold622	subtractBed	intrn	79473	79821	.	-	.	Parent=CGI_10018191;
	scaffold622	TRF	Tandem_Repeat	79473	79821	563	+	.	.
scaffold622	subtractBed	intrn	114893	115186	.	+	.	Parent=CGI_10018196;
	scaffold622	TRF	Tandem_Repeat	114893	115186	261	+	.	.
scaffold622	subtractBed	intrn	114876	115125	.	+	.	Parent=CGI_10018196;
	scaffold622	TRF	Tandem_Repeat	114876	115125	331	+	.	.
scaffold622	subtractBed	intrn	135626	135735	.	+	.	Parent=CGI_10018197;
	scaffold622	TRF	Tandem_Repeat	135626	135735	96	+	.	.
scaffold622	subtractBed	intrn	135693	135737	.	+	.	Parent=CGI_10018197;
	scaffold622	TRF	Tandem_Repeat	135693	135737	81	+	.	.
scaffold622	subtractBed	intrn	259764	259790	.	-	.	Parent=CGI_10018204;
	scaffold622	TRF	Tandem_Repeat	259764	259790	54	+	.	.
scaffold622	subtractBed	intrn	259764	259790	.	+	.	Parent=CGI_10018205;
	scaffold622	TRF	Tandem_Repeat	259764	259790	54	+	.	.
scaffold622	subtractBed	intrn	269743	269783	.	+	.	Parent=CGI_10018205;
	scaffold622	TRF	Tandem_Repeat	269743	269783	59	+	.	.
scaffold622	subtractBed	intrn	288224	288366	.	-	.	Parent=CGI_10018207;
	scaffold622	TRF	Tandem_Repeat	288224	288366	213	+	.	.
scaffold622	subtractBed	intrn	309060	309362	.	-	.	Parent=CGI_10018209;
	scaffold622	WUBlastX	DNA_Crypton	309060	309362	69	+	.	.
scaffold622	subtractBed	intrn	312449	312475	.	-	.	Parent=CGI_10018209;
	scaffold622	TRF	Tandem_Repeat	312449	312475	54	+	.	.
scaffold622	subtractBed	intrn	336491	337449	.	+	.	Parent=CGI_10018211;
	scaffold622	TRF	Tandem_Repeat	336491	337449	1366	+	.	.
scaffold622	subtractBed	intrn	383847	383871	.	+	.	Parent=CGI_10018213;
	scaffold622	TRF	Tandem_Repeat	383847	383871	50	+	.	.
scaffold622	subtractBed	intrn	381934	383508	.	+	.	Parent=CGI_10018213;
	scaffold622	WUBlastX	LINE_RTE-X	381934	383508	634	+	.	.
scaffold622	subtractBed	intrn	384784	384844	.	+	.	Parent=CGI_10018213;
	scaffold622	TRF	Tandem_Repeat	384784	384844	122	+	.	.
scaffold622	subtractBed	intrn	390518	390587	.	+	.	Parent=CGI_10018214;
	scaffold622	TRF	Tandem_Repeat	390518	390587	122	+	.	.
scaffold622	subtractBed	intrn	390653	390708	.	+	.	Parent=CGI_10018214;
	scaffold622	TRF	Tandem_Repeat	390653	390708	51	+	.	.
scaffold622	subtractBed	intrn	395366	396124	.	+	.	Parent=CGI_10018214;
	scaffold622	TRF	Tandem_Repeat	395366	396124	1035	+	.	.
scaffold622	subtractBed	intrn	396210	396280	.	+	.	Parent=CGI_10018214;
	scaffold622	TRF	Tandem_Repeat	396210	396280	106	+	.	.
scaffold622	subtractBed	intrn	394376	394555	.	+	.	Parent=CGI_10018214;
	scaffold622	WUBlastX	LINE_RTE-X	394376	394555	101	+	.	.
scaffold622	subtractBed	intrn	423821	424051	.	+	.	Parent=CGI_10018215;
	scaffold622	TRF	Tandem_Repeat	423821	424051	426	+	.	.
scaffold622	subtractBed	intrn	494806	494843	.	+	.	Parent=CGI_10018222;
	scaffold622	TRF	Tandem_Repeat	494806	494843	60	+	.	.
scaffold622	subtractBed	intrn	494981	495731	.	+	.	Parent=CGI_10018222;
	scaffold622	TRF	Tandem_Repeat	494981	495731	967	+	.	.
scaffold622	subtractBed	intrn	507953	508143	.	+	.	Parent=CGI_10018222;
	scaffold622	TRF	Tandem_Repeat	507953	508143	285	+	.	.
scaffold622	subtractBed	intrn	507783	507951	.	+	.	Parent=CGI_10018222;
	scaffold622	TRF	Tandem_Repeat	507783	507951	266	+	.	.
scaffold622	subtractBed	intrn	530396	531158	.	-	.	Parent=CGI_10018223;
	scaffold622	TRF	Tandem_Repeat	530396	531158	1004	+	.	.
scaffold622	subtractBed	intrn	531320	531369	.	-	.	Parent=CGI_10018223;
	scaffold622	TRF	Tandem_Repeat	531320	531369	63	+	.	.
scaffold622	subtractBed	intrn	535056	535087	.	-	.	Parent=CGI_10018224;
	scaffold622	TRF	Tandem_Repeat	535056	535087	55	+	.	.
scaffold625	subtractBed	intrn	25208	25234	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	25208	25234	54	+	.	.
scaffold625	subtractBed	intrn	27822	27990	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	27822	27990	209	+	.	.
scaffold625	subtractBed	intrn	27818	27996	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	27818	27996	250	+	.	.
scaffold625	subtractBed	intrn	27908	27985	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	27908	27985	54	+	.	.
scaffold625	subtractBed	intrn	31272	31303	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	31272	31303	55	+	.	.
scaffold625	subtractBed	intrn	32779	33275	.	-	.	Parent=CGI_10023394;
	scaffold625	TRF	Tandem_Repeat	32779	33275	748	+	.	.
scaffold625	subtractBed	intrn	51315	51469	.	+	.	Parent=CGI_10023395;
	scaffold625	TRF	Tandem_Repeat	51315	51469	283	+	.	.
scaffold625	subtractBed	intrn	56958	56998	.	+	.	Parent=CGI_10023395;
	scaffold625	TRF	Tandem_Repeat	56958	56998	50	+	.	.
scaffold625	subtractBed	intrn	59632	59672	.	+	.	Parent=CGI_10023395;
	scaffold625	TRF	Tandem_Repeat	59632	59672	50	+	.	.
scaffold625	subtractBed	intrn	64877	65205	.	+	.	Parent=CGI_10023396;
	scaffold625	WUBlastX	LTR_Gypsy	64831	65205	83	+	.	.
scaffold625	subtractBed	intrn	77573	77605	.	-	.	Parent=CGI_10023398;
	scaffold625	TRF	Tandem_Repeat	77573	77605	57	+	.	.
scaffold625	subtractBed	intrn	95079	95235	.	+	.	Parent=CGI_10023401;
	scaffold625	TRF	Tandem_Repeat	95079	95235	126	+	.	.
scaffold625	subtractBed	intrn	95241	95473	.	+	.	Parent=CGI_10023401;
	scaffold625	TRF	Tandem_Repeat	95241	95473	164	+	.	.
scaffold625	subtractBed	intrn	95241	95564	.	+	.	Parent=CGI_10023401;
	scaffold625	TRF	Tandem_Repeat	95241	95564	176	+	.	.
scaffold625	subtractBed	intrn	95479	95564	.	+	.	Parent=CGI_10023401;
	scaffold625	TRF	Tandem_Repeat	95479	95564	101	+	.	.
scaffold625	subtractBed	intrn	98945	99953	.	+	.	Parent=CGI_10023401;
	scaffold625	TRF	Tandem_Repeat	98945	99953	1013	+	.	.
scaffold625	subtractBed	intrn	95079	95235	.	-	.	Parent=CGI_10023402;
	scaffold625	TRF	Tandem_Repeat	95079	95235	126	+	.	.
scaffold625	subtractBed	intrn	95241	95473	.	-	.	Parent=CGI_10023402;
	scaffold625	TRF	Tandem_Repeat	95241	95473	164	+	.	.
scaffold625	subtractBed	intrn	95241	95564	.	-	.	Parent=CGI_10023402;
	scaffold625	TRF	Tandem_Repeat	95241	95564	176	+	.	.
scaffold625	subtractBed	intrn	95479	95564	.	-	.	Parent=CGI_10023402;
	scaffold625	TRF	Tandem_Repeat	95479	95564	101	+	.	.
scaffold625	subtractBed	intrn	98945	99953	.	-	.	Parent=CGI_10023402;
	scaffold625	TRF	Tandem_Repeat	98945	99953	1013	+	.	.
scaffold625	subtractBed	intrn	142673	144114	.	+	.	Parent=CGI_10023406;
	scaffold625	TRF	Tandem_Repeat	142673	144114	1521	+	.	.
scaffold625	subtractBed	intrn	143176	143444	.	+	.	Parent=CGI_10023406;
	scaffold625	TRF	Tandem_Repeat	143176	143444	70	+	.	.
scaffold625	subtractBed	intrn	153355	153391	.	+	.	Parent=CGI_10023407;
	scaffold625	TRF	Tandem_Repeat	153355	153391	65	+	.	.
scaffold625	subtractBed	intrn	197963	198310	.	+	.	Parent=CGI_10023408;
	scaffold625	TRF	Tandem_Repeat	197963	198310	209	+	.	.
scaffold625	subtractBed	intrn	197971	198228	.	+	.	Parent=CGI_10023408;
	scaffold625	TRF	Tandem_Repeat	197971	198228	241	+	.	.
scaffold625	subtractBed	intrn	198352	198617	.	+	.	Parent=CGI_10023408;
	scaffold625	TRF	Tandem_Repeat	198352	198617	176	+	.	.
scaffold625	subtractBed	intrn	198327	198740	.	+	.	Parent=CGI_10023408;
	scaffold625	TRF	Tandem_Repeat	198327	198740	250	+	.	.
scaffold625	subtractBed	intrn	237158	237195	.	+	.	Parent=CGI_10023410;
	scaffold625	TRF	Tandem_Repeat	237158	237195	69	+	.	.
scaffold625	subtractBed	intrn	240807	240851	.	+	.	Parent=CGI_10023410;
	scaffold625	TRF	Tandem_Repeat	240807	240851	81	+	.	.
scaffold625	subtractBed	intrn	245914	246060	.	+	.	Parent=CGI_10023410;
	scaffold625	TRF	Tandem_Repeat	245914	246060	73	+	.	.
scaffold625	subtractBed	intrn	245976	246124	.	+	.	Parent=CGI_10023410;
	scaffold625	TRF	Tandem_Repeat	245976	246124	97	+	.	.
scaffold625	subtractBed	intrn	247704	247834	.	+	.	Parent=CGI_10023410;
	scaffold625	TRF	Tandem_Repeat	247704	247834	244	+	.	.
scaffold625	subtractBed	intrn	310209	310245	.	+	.	Parent=CGI_10023412;
	scaffold625	TRF	Tandem_Repeat	310209	310245	56	+	.	.
scaffold625	subtractBed	intrn	317466	317502	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	317466	317502	74	+	.	.
scaffold625	subtractBed	intrn	318127	318447	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	318127	318447	462	+	.	.
scaffold625	subtractBed	intrn	318127	318447	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	318127	318447	545	+	.	.
scaffold625	subtractBed	intrn	318590	318669	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	318590	318669	133	+	.	.
scaffold625	subtractBed	intrn	323266	323316	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	323266	323316	102	+	.	.
scaffold625	subtractBed	intrn	326827	327824	.	+	.	Parent=CGI_10023413;
	scaffold625	TRF	Tandem_Repeat	326827	327824	1732	+	.	.
scaffold625	subtractBed	intrn	336114	337110	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	336114	337110	1895	+	.	.
scaffold625	subtractBed	intrn	338847	339388	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	338847	339388	205	+	.	.
scaffold625	subtractBed	intrn	339148	339465	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	339148	339465	384	+	.	.
scaffold625	subtractBed	intrn	339606	340438	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	339606	340438	1199	+	.	.
scaffold625	subtractBed	intrn	339600	340747	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	339600	340747	1046	+	.	.
scaffold625	subtractBed	intrn	340541	340734	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	340541	340734	309	+	.	.
scaffold625	subtractBed	intrn	341223	341743	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	341223	341743	171	+	.	.
scaffold625	subtractBed	intrn	341866	341923	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	341866	341923	116	+	.	.
scaffold625	subtractBed	intrn	341921	341959	.	-	.	Parent=CGI_10023414;
	scaffold625	TRF	Tandem_Repeat	341921	341959	69	+	.	.
scaffold625	subtractBed	intrn	437743	437950	.	+	.	Parent=CGI_10023417;
	scaffold625	TRF	Tandem_Repeat	437743	437987	287	+	.	.
scaffold625	subtractBed	intrn	441300	441417	.	+	.	Parent=CGI_10023417;
	scaffold625	TRF	Tandem_Repeat	441300	441417	191	+	.	.
scaffold625	subtractBed	intrn	447026	447073	.	+	.	Parent=CGI_10023417;
	scaffold625	TRF	Tandem_Repeat	447026	447073	96	+	.	.
scaffold625	subtractBed	intrn	452796	453040	.	+	.	Parent=CGI_10023417;
	scaffold625	TRF	Tandem_Repeat	452796	453040	355	+	.	.
scaffold625	subtractBed	intrn	466062	466116	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	466062	466116	110	+	.	.
scaffold625	subtractBed	intrn	466874	467107	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	466874	467107	405	+	.	.
scaffold625	subtractBed	intrn	471436	471462	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	471436	471462	54	+	.	.
scaffold625	subtractBed	intrn	472351	472402	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	472351	472402	50	+	.	.
scaffold625	subtractBed	intrn	472622	472770	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	472622	472770	86	+	.	.
scaffold625	subtractBed	intrn	472686	472817	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	472686	472817	61	+	.	.
scaffold625	subtractBed	intrn	473816	474552	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	473816	474552	721	+	.	.
scaffold625	subtractBed	intrn	480525	480679	.	-	.	Parent=CGI_10023418;
	scaffold625	TRF	Tandem_Repeat	480501	480679	238	+	.	.
scaffold625	subtractBed	intrn	496300	496509	.	-	.	Parent=CGI_10023420;
	scaffold625	WUBlastX	LINE_RTE-BovB	496300	496509	37	+	.	.
scaffold625	subtractBed	intrn	562066	562102	.	+	.	Parent=CGI_10023424;
	scaffold625	TRF	Tandem_Repeat	562066	562102	74	+	.	.
scaffold625	subtractBed	intrn	593872	594018	.	-	.	Parent=CGI_10023425;
	scaffold625	TRF	Tandem_Repeat	593872	594018	113	+	.	.
scaffold625	subtractBed	intrn	605517	605955	.	-	.	Parent=CGI_10023425;
	scaffold625	TRF	Tandem_Repeat	605517	605955	587	+	.	.
scaffold625	subtractBed	intrn	600761	601024	.	-	.	Parent=CGI_10023425;
	scaffold625	WUBlastX	LINE_CR1-L2	600761	601024	64	-	.	.
scaffold625	subtractBed	intrn	601027	602493	.	-	.	Parent=CGI_10023425;
	scaffold625	WUBlastX	LINE_L2	601027	602493	881	-	.	.
scaffold625	subtractBed	intrn	601375	602718	.	-	.	Parent=CGI_10023425;
	scaffold625	WUBlastX	LINE_Jockey	601375	602718	208	-	.	.
scaffold625	subtractBed	intrn	610485	611267	.	-	.	Parent=CGI_10023425;
	scaffold625	TRF	Tandem_Repeat	610485	611267	846	+	.	.
scaffold625	subtractBed	intrn	610514	611267	.	-	.	Parent=CGI_10023425;
	scaffold625	TRF	Tandem_Repeat	610514	611267	1011	+	.	.
scaffold625	subtractBed	intrn	593872	594018	.	+	.	Parent=CGI_10023426;
	scaffold625	TRF	Tandem_Repeat	593872	594018	113	+	.	.
scaffold625	subtractBed	intrn	605517	605955	.	+	.	Parent=CGI_10023426;
	scaffold625	TRF	Tandem_Repeat	605517	605955	587	+	.	.
scaffold625	subtractBed	intrn	600761	601024	.	+	.	Parent=CGI_10023426;
	scaffold625	WUBlastX	LINE_CR1-L2	600761	601024	64	-	.	.
scaffold625	subtractBed	intrn	601027	602493	.	+	.	Parent=CGI_10023426;
	scaffold625	WUBlastX	LINE_L2	601027	602493	881	-	.	.
scaffold625	subtractBed	intrn	601375	602718	.	+	.	Parent=CGI_10023426;
	scaffold625	WUBlastX	LINE_Jockey	601375	602718	208	-	.	.
scaffold625	subtractBed	intrn	610485	611267	.	+	.	Parent=CGI_10023426;
	scaffold625	TRF	Tandem_Repeat	610485	611267	846	+	.	.
scaffold625	subtractBed	intrn	610514	611267	.	+	.	Parent=CGI_10023426;
	scaffold625	TRF	Tandem_Repeat	610514	611267	1011	+	.	.
scaffold625	subtractBed	intrn	625755	625825	.	+	.	Parent=CGI_10023426;
	scaffold625	TRF	Tandem_Repeat	625755	625825	76	+	.	.
scaffold625	subtractBed	intrn	665218	665302	.	-	.	Parent=CGI_10023430;
	scaffold625	TRF	Tandem_Repeat	665218	665302	116	+	.	.
scaffold625	subtractBed	intrn	669060	669629	.	-	.	Parent=CGI_10023430;
	scaffold625	WUBlastX	LINE_L1-Tx1	669060	669629	48	-	.	.
scaffold625	subtractBed	intrn	669258	669542	.	-	.	Parent=CGI_10023430;
	scaffold625	WUBlastX	LINE_L1	669258	669542	82	-	.	.
scaffold625	subtractBed	intrn	669180	669491	.	-	.	Parent=CGI_10023430;
	scaffold625	WUBlastX	LINE_L1-Tx1	669180	669491	139	-	.	.
scaffold625	subtractBed	intrn	669048	669491	.	-	.	Parent=CGI_10023430;
	scaffold625	WUBlastX	LINE_L1-Tx1	669048	669491	109	-	.	.
scaffold625	subtractBed	intrn	676917	676990	.	+	.	Parent=CGI_10023431;
	scaffold625	TRF	Tandem_Repeat	676917	676990	103	+	.	.
scaffold625	subtractBed	intrn	679685	679732	.	+	.	Parent=CGI_10023431;
	scaffold625	TRF	Tandem_Repeat	679685	679732	78	+	.	.
scaffold625	subtractBed	intrn	680866	681636	.	+	.	Parent=CGI_10023431;
	scaffold625	TRF	Tandem_Repeat	680866	681636	950	+	.	.
scaffold625	subtractBed	intrn	681014	681741	.	+	.	Parent=CGI_10023431;
	scaffold625	TRF	Tandem_Repeat	681014	681741	991	+	.	.
scaffold625	subtractBed	intrn	693355	693689	.	-	.	Parent=CGI_10023433;
	scaffold625	TRF	Tandem_Repeat	693355	693689	438	+	.	.
scaffold625	subtractBed	intrn	696091	696615	.	-	.	Parent=CGI_10023433;
	scaffold625	WUBlastX	DNA_IS	696091	696615	803	+	.	.
scaffold625	subtractBed	intrn	701257	701316	.	-	.	Parent=CGI_10023433;
	scaffold625	TRF	Tandem_Repeat	701257	701316	120	+	.	.
scaffold625	subtractBed	intrn	728962	729013	.	-	.	Parent=CGI_10023435;
	scaffold625	TRF	Tandem_Repeat	728962	729013	104	+	.	.
scaffold625	subtractBed	intrn	733091	733318	.	-	.	Parent=CGI_10023435;
	scaffold625	TRF	Tandem_Repeat	733091	733318	420	+	.	.
scaffold625	subtractBed	intrn	742094	742509	.	-	.	Parent=CGI_10023436;
	scaffold625	TRF	Tandem_Repeat	742094	742509	530	+	.	.
scaffold625	subtractBed	intrn	760829	761002	.	-	.	Parent=CGI_10023437;
	scaffold625	WUBlastX	LTR_Gypsy	760829	761002	48	-	.	.
scaffold625	subtractBed	intrn	762204	762314	.	-	.	Parent=CGI_10023437;
	scaffold625	WUBlastX	LTR_Gypsy	762204	762314	25	-	.	.
scaffold625	subtractBed	intrn	807361	807428	.	+	.	Parent=CGI_10023441;
	scaffold625	TRF	Tandem_Repeat	807361	807428	127	+	.	.
scaffold625	subtractBed	intrn	807981	808297	.	+	.	Parent=CGI_10023441;
	scaffold625	TRF	Tandem_Repeat	807969	808297	394	+	.	.
scaffold625	subtractBed	intrn	807981	808297	.	+	.	Parent=CGI_10023441;
	scaffold625	TRF	Tandem_Repeat	807969	808297	414	+	.	.
scaffold625	subtractBed	intrn	808830	809765	.	+	.	Parent=CGI_10023441;
	scaffold625	TRF	Tandem_Repeat	808830	809765	1366	+	.	.
scaffold626	subtractBed	intrn	12912	12969	.	-	.	Parent=CGI_10019976;
	scaffold626	TRF	Tandem_Repeat	12912	12969	116	+	.	.
scaffold626	subtractBed	intrn	38807	38808	.	-	.	Parent=CGI_10019977;
	scaffold626	WUBlastX	RC_Helitron	38527	38808	77	-	.	.
scaffold626	subtractBed	intrn	54430	54431	.	-	.	Parent=CGI_10019977;
	scaffold626	WUBlastX	RC_Helitron	54144	54431	119	-	.	.
scaffold626	subtractBed	intrn	58533	58570	.	-	.	Parent=CGI_10019977;
	scaffold626	TRF	Tandem_Repeat	58533	58570	58	+	.	.
scaffold626	subtractBed	intrn	67155	67437	.	+	.	Parent=CGI_10019978;
	scaffold626	TRF	Tandem_Repeat	67155	67437	548	+	.	.
scaffold626	subtractBed	intrn	74894	75061	.	+	.	Parent=CGI_10019978;
	scaffold626	TRF	Tandem_Repeat	74894	75061	191	+	.	.
scaffold626	subtractBed	intrn	75254	75298	.	+	.	Parent=CGI_10019978;
	scaffold626	TRF	Tandem_Repeat	75254	75298	90	+	.	.
scaffold626	subtractBed	intrn	139703	139728	.	-	.	Parent=CGI_10019981;
	scaffold626	TRF	Tandem_Repeat	139703	139728	52	+	.	.
scaffold626	subtractBed	intrn	143320	143373	.	-	.	Parent=CGI_10019981;
	scaffold626	TRF	Tandem_Repeat	143320	143373	99	+	.	.
scaffold626	subtractBed	intrn	141405	141551	.	-	.	Parent=CGI_10019981;
	scaffold626	WUBlastX	DNA_Harbinger	141405	141551	57	-	.	.
scaffold626	subtractBed	intrn	141022	141138	.	-	.	Parent=CGI_10019981;
	scaffold626	WUBlastX	DNA_Harbinger	141022	141138	40	-	.	.
scaffold626	subtractBed	intrn	140640	140762	.	-	.	Parent=CGI_10019981;
	scaffold626	WUBlastX	DNA_Harbinger	140640	140762	60	-	.	.
scaffold626	subtractBed	intrn	141432	141572	.	-	.	Parent=CGI_10019981;
	scaffold626	WUBlastX	DNA_Harbinger	141432	141572	92	-	.	.
scaffold626	subtractBed	intrn	142594	142935	.	-	.	Parent=CGI_10019981;
	scaffold626	WUBlastX	DNA_Harbinger	142594	142935	109	-	.	.
scaffold626	subtractBed	intrn	151708	151760	.	-	.	Parent=CGI_10019981;
	scaffold626	TRF	Tandem_Repeat	151708	151760	72	+	.	.
scaffold626	subtractBed	intrn	151706	151771	.	-	.	Parent=CGI_10019981;
	scaffold626	TRF	Tandem_Repeat	151706	151771	88	+	.	.
scaffold626	subtractBed	intrn	151710	151771	.	-	.	Parent=CGI_10019981;
	scaffold626	TRF	Tandem_Repeat	151710	151771	90	+	.	.
scaffold626	subtractBed	intrn	172034	172082	.	-	.	Parent=CGI_10019984;
	scaffold626	TRF	Tandem_Repeat	172034	172082	53	+	.	.
scaffold626	subtractBed	intrn	173535	173569	.	-	.	Parent=CGI_10019984;
	scaffold626	TRF	Tandem_Repeat	173535	173569	61	+	.	.
scaffold626	subtractBed	intrn	180948	180974	.	+	.	Parent=CGI_10019985;
	scaffold626	TRF	Tandem_Repeat	180948	180974	54	+	.	.
scaffold626	subtractBed	intrn	187436	188167	.	+	.	Parent=CGI_10019986;
	scaffold626	WUBlastX	DNA_hAT	187436	188167	167	+	.	.
scaffold626	subtractBed	intrn	190065	190106	.	+	.	Parent=CGI_10019986;
	scaffold626	TRF	Tandem_Repeat	190065	190106	54	+	.	.
scaffold626	subtractBed	intrn	190176	190427	.	+	.	Parent=CGI_10019986;
	scaffold626	WUBlastX	DNA_hAT	190176	190427	37	+	.	.
scaffold626	subtractBed	intrn	189711	189911	.	+	.	Parent=CGI_10019986;
	scaffold626	WUBlastX	DNA_hAT	189711	189911	59	+	.	.
scaffold626	subtractBed	intrn	189297	189407	.	+	.	Parent=CGI_10019986;
	scaffold626	WUBlastX	DNA_hAT	189297	189407	65	+	.	.
scaffold626	subtractBed	intrn	189267	189407	.	+	.	Parent=CGI_10019986;
	scaffold626	WUBlastX	DNA_hAT	189267	189407	55	+	.	.
scaffold626	subtractBed	intrn	197255	197304	.	-	.	Parent=CGI_10019988;
	scaffold626	TRF	Tandem_Repeat	197255	197304	100	+	.	.
scaffold626	subtractBed	intrn	204595	204644	.	+	.	Parent=CGI_10019989;
	scaffold626	TRF	Tandem_Repeat	204595	204644	91	+	.	.
scaffold626	subtractBed	intrn	205337	205384	.	+	.	Parent=CGI_10019989;
	scaffold626	TRF	Tandem_Repeat	205337	205384	96	+	.	.
scaffold626	subtractBed	intrn	220068	220121	.	-	.	Parent=CGI_10019991;
	scaffold626	TRF	Tandem_Repeat	220068	220121	108	+	.	.
scaffold626	subtractBed	intrn	395348	395402	.	-	.	Parent=CGI_10019994;
	scaffold626	TRF	Tandem_Repeat	395348	395402	110	+	.	.
scaffold626	subtractBed	intrn	395402	395433	.	-	.	Parent=CGI_10019994;
	scaffold626	TRF	Tandem_Repeat	395402	395433	55	+	.	.
scaffold626	subtractBed	intrn	407137	408433	.	-	.	Parent=CGI_10019994;
	scaffold626	TRF	Tandem_Repeat	407137	408433	1414	+	.	.
scaffold626	subtractBed	intrn	407499	408294	.	-	.	Parent=CGI_10019994;
	scaffold626	TRF	Tandem_Repeat	407499	408294	514	+	.	.
scaffold626	subtractBed	intrn	407648	408433	.	-	.	Parent=CGI_10019994;
	scaffold626	TRF	Tandem_Repeat	407648	408433	870	+	.	.
scaffold626	subtractBed	intrn	433091	433305	.	-	.	Parent=CGI_10019996;
	scaffold626	TRF	Tandem_Repeat	433091	433305	277	+	.	.
scaffold626	subtractBed	intrn	442812	442837	.	-	.	Parent=CGI_10019997;
	scaffold626	TRF	Tandem_Repeat	442812	442837	52	+	.	.
scaffold626	subtractBed	intrn	485311	485405	.	-	.	Parent=CGI_10020000;
	scaffold626	TRF	Tandem_Repeat	485311	485405	156	+	.	.
scaffold626	subtractBed	intrn	482857	483258	.	-	.	Parent=CGI_10020000;
	scaffold626	WUBlastX	LINE_Penelope	482857	483258	42	-	.	.
scaffold626	subtractBed	intrn	482965	483192	.	-	.	Parent=CGI_10020000;
	scaffold626	WUBlastX	LINE_Penelope	482965	483192	73	-	.	.
scaffold626	subtractBed	intrn	508113	508167	.	+	.	Parent=CGI_10020002;
	scaffold626	TRF	Tandem_Repeat	508113	508167	110	+	.	.
scaffold626	subtractBed	intrn	569125	569214	.	+	.	Parent=CGI_10020005;
	scaffold626	WUBlastX	LINE_L2	569125	569214	43	-	.	.
scaffold63	subtractBed	intrn	71689	71733	.	+	.	Parent=CGI_10017267;
	scaffold63	TRF	Tandem_Repeat	71689	71733	90	+	.	.
scaffold63	subtractBed	intrn	91919	91976	.	-	.	Parent=CGI_10017270;
	scaffold63	TRF	Tandem_Repeat	91919	91976	109	+	.	.
scaffold63	subtractBed	intrn	142058	142096	.	+	.	Parent=CGI_10017272;
	scaffold63	TRF	Tandem_Repeat	142058	142096	62	+	.	.
scaffold63	subtractBed	intrn	143541	144581	.	+	.	Parent=CGI_10017272;
	scaffold63	WUBlastX	DNA_TcMar-Tc1	143541	144581	202	+	.	.
scaffold63	subtractBed	intrn	166754	166801	.	+	.	Parent=CGI_10017272;
	scaffold63	TRF	Tandem_Repeat	166754	166801	96	+	.	.
scaffold63	subtractBed	intrn	166754	166801	.	-	.	Parent=CGI_10017273;
	scaffold63	TRF	Tandem_Repeat	166754	166801	96	+	.	.
scaffold63	subtractBed	intrn	169835	169893	.	-	.	Parent=CGI_10017273;
	scaffold63	TRF	Tandem_Repeat	169835	169893	66	+	.	.
scaffold63	subtractBed	intrn	169833	169893	.	-	.	Parent=CGI_10017273;
	scaffold63	TRF	Tandem_Repeat	169833	169893	88	+	.	.
scaffold63	subtractBed	intrn	198335	198377	.	-	.	Parent=CGI_10017274;
	scaffold63	TRF	Tandem_Repeat	198335	198377	50	+	.	.
scaffold63	subtractBed	intrn	200982	201023	.	-	.	Parent=CGI_10017274;
	scaffold63	TRF	Tandem_Repeat	200982	201023	84	+	.	.
scaffold63	subtractBed	intrn	202222	202246	.	-	.	Parent=CGI_10017274;
	scaffold63	TRF	Tandem_Repeat	202222	202246	50	+	.	.
scaffold63	subtractBed	intrn	202841	202906	.	-	.	Parent=CGI_10017274;
	scaffold63	TRF	Tandem_Repeat	202841	202906	105	+	.	.
scaffold63	subtractBed	intrn	203666	203728	.	-	.	Parent=CGI_10017274;
	scaffold63	TRF	Tandem_Repeat	203666	203728	119	+	.	.
scaffold63	subtractBed	intrn	237412	237445	.	+	.	Parent=CGI_10017275;
	scaffold63	TRF	Tandem_Repeat	237412	237445	59	+	.	.
scaffold63	subtractBed	intrn	234564	234899	.	+	.	Parent=CGI_10017275;
	scaffold63	WUBlastX	LINE_L1	234564	234899	28	-	.	.
scaffold63	subtractBed	intrn	361983	362020	.	+	.	Parent=CGI_10017279;
	scaffold63	TRF	Tandem_Repeat	361983	362020	58	+	.	.
scaffold63	subtractBed	intrn	362022	362048	.	+	.	Parent=CGI_10017279;
	scaffold63	TRF	Tandem_Repeat	362022	362048	54	+	.	.
scaffold63	subtractBed	intrn	366429	366497	.	+	.	Parent=CGI_10017279;
	scaffold63	TRF	Tandem_Repeat	366429	366497	122	+	.	.
scaffold63	subtractBed	intrn	406823	406994	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	406823	406994	238	+	.	.
scaffold63	subtractBed	intrn	412580	412624	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	412580	412624	51	+	.	.
scaffold63	subtractBed	intrn	413725	413774	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	413725	413774	100	+	.	.
scaffold63	subtractBed	intrn	415930	416049	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	415930	416049	49	+	.	.
scaffold63	subtractBed	intrn	417499	418320	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	417499	418320	195	+	.	.
scaffold63	subtractBed	intrn	415282	415608	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	415282	415608	79	+	.	.
scaffold63	subtractBed	intrn	417157	418191	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	417157	418191	301	+	.	.
scaffold63	subtractBed	intrn	417322	418389	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	417322	418569	169	+	.	.
scaffold63	subtractBed	intrn	415228	415536	.	-	.	Parent=CGI_10017281;
	scaffold63	WUBlastX	DNA_En-Spm	415228	415536	43	+	.	.
scaffold63	subtractBed	intrn	419456	419698	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	419456	419698	279	+	.	.
scaffold63	subtractBed	intrn	419878	419909	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	419878	419909	57	+	.	.
scaffold63	subtractBed	intrn	420104	420178	.	-	.	Parent=CGI_10017281;
	scaffold63	TRF	Tandem_Repeat	420104	420178	143	+	.	.
scaffold63	subtractBed	intrn	450595	450819	.	+	.	Parent=CGI_10017284;
	scaffold63	WUBlastX	LINE_CR1-L2	450595	450819	72	-	.	.
scaffold630	subtractBed	intrn	21218	21358	.	+	.	Parent=CGI_10018322;
	scaffold630	TRF	Tandem_Repeat	21218	21358	74	+	.	.
scaffold630	subtractBed	intrn	29460	30491	.	+	.	Parent=CGI_10018322;
	scaffold630	TRF	Tandem_Repeat	29460	30491	1447	+	.	.
scaffold630	subtractBed	intrn	32304	32351	.	+	.	Parent=CGI_10018322;
	scaffold630	TRF	Tandem_Repeat	32304	32351	96	+	.	.
scaffold630	subtractBed	intrn	38207	38252	.	+	.	Parent=CGI_10018322;
	scaffold630	TRF	Tandem_Repeat	38207	38252	58	+	.	.
scaffold630	subtractBed	intrn	38425	40271	.	+	.	Parent=CGI_10018322;
	scaffold630	TRF	Tandem_Repeat	38425	40271	2756	+	.	.
scaffold630	subtractBed	intrn	66406	66437	.	-	.	Parent=CGI_10018324;
	scaffold630	TRF	Tandem_Repeat	66406	66437	64	+	.	.
scaffold630	subtractBed	intrn	84705	84741	.	-	.	Parent=CGI_10018325;
	scaffold630	TRF	Tandem_Repeat	84705	84741	74	+	.	.
scaffold630	subtractBed	intrn	86423	86587	.	-	.	Parent=CGI_10018325;
	scaffold630	TRF	Tandem_Repeat	86423	86587	197	+	.	.
scaffold630	subtractBed	intrn	86657	86797	.	-	.	Parent=CGI_10018325;
	scaffold630	TRF	Tandem_Repeat	86657	86797	131	+	.	.
scaffold630	subtractBed	intrn	85561	86178	.	-	.	Parent=CGI_10018325;
	scaffold630	WUBlastX	LINE_RTE-X	85561	86178	77	+	.	.
scaffold630	subtractBed	intrn	85669	86301	.	-	.	Parent=CGI_10018325;
	scaffold630	WUBlastX	LINE_RTE-X	85669	86301	63	+	.	.
scaffold630	subtractBed	intrn	86995	87288	.	-	.	Parent=CGI_10018325;
	scaffold630	WUBlastX	LINE_RTE-X	86995	87288	105	+	.	.
scaffold630	subtractBed	intrn	85669	86178	.	-	.	Parent=CGI_10018325;
	scaffold630	WUBlastX	LINE_RTE-X	85669	86178	101	+	.	.
scaffold630	subtractBed	intrn	165732	165785	.	-	.	Parent=CGI_10018328;
	scaffold630	TRF	Tandem_Repeat	165732	165785	99	+	.	.
scaffold630	subtractBed	intrn	231539	231565	.	-	.	Parent=CGI_10018329;
	scaffold630	TRF	Tandem_Repeat	231539	231565	54	+	.	.
scaffold630	subtractBed	intrn	235356	236330	.	-	.	Parent=CGI_10018329;
	scaffold630	WUBlastX	LINE_L1-Tx1	235356	236330	188	-	.	.
scaffold630	subtractBed	intrn	235356	236330	.	+	.	Parent=CGI_10018330;
	scaffold630	WUBlastX	LINE_L1-Tx1	235356	236330	188	-	.	.
scaffold630	subtractBed	intrn	241041	241095	.	+	.	Parent=CGI_10018330;
	scaffold630	TRF	Tandem_Repeat	241041	241095	110	+	.	.
scaffold630	subtractBed	intrn	260073	260135	.	+	.	Parent=CGI_10018331;
	scaffold630	TRF	Tandem_Repeat	260073	260135	117	+	.	.
scaffold630	subtractBed	intrn	260785	260828	.	+	.	Parent=CGI_10018331;
	scaffold630	TRF	Tandem_Repeat	260785	260828	61	+	.	.
scaffold630	subtractBed	intrn	260786	260835	.	+	.	Parent=CGI_10018331;
	scaffold630	TRF	Tandem_Repeat	260786	260835	55	+	.	.
scaffold630	subtractBed	intrn	260859	261983	.	+	.	Parent=CGI_10018331;
	scaffold630	TRF	Tandem_Repeat	260859	261983	1693	+	.	.
scaffold630	subtractBed	intrn	265223	265355	.	+	.	Parent=CGI_10018331;
	scaffold630	TRF	Tandem_Repeat	265223	265355	101	+	.	.
scaffold630	subtractBed	intrn	341276	342256	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	341276	342256	51	-	.	.
scaffold630	subtractBed	intrn	341558	342256	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	341558	342256	494	-	.	.
scaffold630	subtractBed	intrn	342925	343101	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	342925	343101	166	-	.	.
scaffold630	subtractBed	intrn	343100	343228	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	343100	343228	108	-	.	.
scaffold630	subtractBed	intrn	342931	343140	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	342931	343140	135	-	.	.
scaffold630	subtractBed	intrn	342259	342489	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	342259	342489	251	-	.	.
scaffold630	subtractBed	intrn	342483	342965	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Gypsy	342483	342965	400	-	.	.
scaffold630	subtractBed	intrn	341102	341160	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LTR_Copia	341047	341160	20	-	.	.
scaffold630	subtractBed	intrn	352522	352698	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_I	352522	352698	26	-	.	.
scaffold630	subtractBed	intrn	349669	350712	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_L1-Tx1	349669	350712	183	-	.	.
scaffold630	subtractBed	intrn	350700	351287	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_L1-Tx1	350700	351287	296	-	.	.
scaffold630	subtractBed	intrn	351256	351963	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_L1-Tx1	351256	351963	527	-	.	.
scaffold630	subtractBed	intrn	352795	353433	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_L1	352795	353433	89	-	.	.
scaffold630	subtractBed	intrn	352561	352818	.	-	.	Parent=CGI_10018332;
	scaffold630	WUBlastX	LINE_L2	352561	352818	38	-	.	.
scaffold630	subtractBed	intrn	374128	375498	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	374128	375498	1108	-	.	.
scaffold630	subtractBed	intrn	374131	375750	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	374131	375750	342	-	.	.
scaffold630	subtractBed	intrn	373614	373658	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	373614	373658	20	-	.	.
scaffold630	subtractBed	intrn	375671	375925	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	375671	375925	74	-	.	.
scaffold630	subtractBed	intrn	375623	375883	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	375623	375883	190	-	.	.
scaffold630	subtractBed	intrn	377917	378702	.	-	.	Parent=CGI_10018333;
	scaffold630	WUBlastX	LTR_Gypsy	377917	378702	280	-	.	.
scaffold630	subtractBed	intrn	393094	393133	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	393094	393133	80	+	.	.
scaffold630	subtractBed	intrn	395455	395516	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	395455	395516	124	+	.	.
scaffold630	subtractBed	intrn	398180	398247	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	398180	398247	136	+	.	.
scaffold630	subtractBed	intrn	400531	400566	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	400531	400566	54	+	.	.
scaffold630	subtractBed	intrn	401522	401596	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	401522	401596	150	+	.	.
scaffold630	subtractBed	intrn	402256	402286	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	402256	402286	62	+	.	.
scaffold630	subtractBed	intrn	407550	407585	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	407550	407585	72	+	.	.
scaffold630	subtractBed	intrn	407831	407892	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	407831	407892	124	+	.	.
scaffold630	subtractBed	intrn	410674	410724	.	+	.	Parent=CGI_10018334;
	scaffold630	TRF	Tandem_Repeat	410674	410724	102	+	.	.
scaffold630	subtractBed	intrn	436889	437115	.	-	.	Parent=CGI_10018335;
	scaffold630	TRF	Tandem_Repeat	436889	437115	391	+	.	.
scaffold630	subtractBed	intrn	445766	446034	.	+	.	Parent=CGI_10018336;
	scaffold630	TRF	Tandem_Repeat	445766	446034	493	+	.	.
scaffold630	subtractBed	intrn	524481	524514	.	+	.	Parent=CGI_10018340;
	scaffold630	TRF	Tandem_Repeat	524481	524514	59	+	.	.
scaffold631	subtractBed	intrn	676	961	.	+	.	Parent=CGI_10014165;
	scaffold631	TRF	Tandem_Repeat	676	961	473	+	.	.
scaffold631	subtractBed	intrn	1408	1594	.	+	.	Parent=CGI_10014165;
	scaffold631	TRF	Tandem_Repeat	1408	1594	302	+	.	.
scaffold631	subtractBed	intrn	3488	3516	.	+	.	Parent=CGI_10014165;
	scaffold631	TRF	Tandem_Repeat	3488	3516	58	+	.	.
scaffold631	subtractBed	intrn	6293	6338	.	+	.	Parent=CGI_10014165;
	scaffold631	TRF	Tandem_Repeat	6293	6338	92	+	.	.
scaffold631	subtractBed	intrn	6388	6437	.	+	.	Parent=CGI_10014165;
	scaffold631	TRF	Tandem_Repeat	6388	6437	100	+	.	.
scaffold631	subtractBed	intrn	16423	16465	.	-	.	Parent=CGI_10014166;
	scaffold631	TRF	Tandem_Repeat	16423	16465	86	+	.	.
scaffold631	subtractBed	intrn	61280	61340	.	+	.	Parent=CGI_10014168;
	scaffold631	TRF	Tandem_Repeat	61280	61340	122	+	.	.
scaffold631	subtractBed	intrn	97206	97265	.	-	.	Parent=CGI_10014170;
	scaffold631	TRF	Tandem_Repeat	97206	97265	57	+	.	.
scaffold631	subtractBed	intrn	96791	97177	.	-	.	Parent=CGI_10014170;
	scaffold631	WUBlastX	LINE_RTE-X	96791	97177	100	+	.	.
scaffold631	subtractBed	intrn	96701	97156	.	-	.	Parent=CGI_10014170;
	scaffold631	WUBlastX	LINE_RTE-X	96701	97156	69	+	.	.
scaffold631	subtractBed	intrn	109739	109779	.	-	.	Parent=CGI_10014170;
	scaffold631	TRF	Tandem_Repeat	109739	109779	64	+	.	.
scaffold631	subtractBed	intrn	114585	114626	.	-	.	Parent=CGI_10014170;
	scaffold631	TRF	Tandem_Repeat	114585	114626	84	+	.	.
scaffold631	subtractBed	intrn	116222	116420	.	-	.	Parent=CGI_10014170;
	scaffold631	TRF	Tandem_Repeat	116222	116420	220	+	.	.
scaffold631	subtractBed	intrn	116222	116413	.	-	.	Parent=CGI_10014170;
	scaffold631	TRF	Tandem_Repeat	116222	116413	287	+	.	.
scaffold631	subtractBed	intrn	132779	133171	.	-	.	Parent=CGI_10014172;
	scaffold631	WUBlastX	LINE_CR1	132779	133171	28	-	.	.
scaffold631	subtractBed	intrn	132674	133078	.	-	.	Parent=CGI_10014172;
	scaffold631	WUBlastX	LINE_L2	132674	133078	90	-	.	.
scaffold631	subtractBed	intrn	133273	133326	.	-	.	Parent=CGI_10014172;
	scaffold631	WUBlastX	LINE_L2	133273	133326	23	-	.	.
scaffold631	subtractBed	intrn	132779	133087	.	-	.	Parent=CGI_10014172;
	scaffold631	WUBlastX	LINE_L2	132779	133087	111	-	.	.
scaffold631	subtractBed	intrn	132599	133069	.	-	.	Parent=CGI_10014172;
	scaffold631	WUBlastX	LINE_CR1-L2	132599	133069	43	-	.	.
scaffold631	subtractBed	intrn	136097	136128	.	-	.	Parent=CGI_10014172;
	scaffold631	TRF	Tandem_Repeat	136097	136128	64	+	.	.
scaffold631	subtractBed	intrn	137304	137351	.	-	.	Parent=CGI_10014172;
	scaffold631	TRF	Tandem_Repeat	137304	137351	96	+	.	.
scaffold631	subtractBed	intrn	164607	164703	.	-	.	Parent=CGI_10014173;
	scaffold631	TRF	Tandem_Repeat	164607	164703	185	+	.	.
scaffold631	subtractBed	intrn	166064	166280	.	-	.	Parent=CGI_10014173;
	scaffold631	TRF	Tandem_Repeat	166064	166280	168	+	.	.
scaffold631	subtractBed	intrn	166064	166280	.	-	.	Parent=CGI_10014173;
	scaffold631	TRF	Tandem_Repeat	166064	166280	197	+	.	.
scaffold631	subtractBed	intrn	168284	169291	.	-	.	Parent=CGI_10014173;
	scaffold631	TRF	Tandem_Repeat	168284	169291	1236	+	.	.
scaffold631	subtractBed	intrn	192811	192845	.	-	.	Parent=CGI_10014175;
	scaffold631	TRF	Tandem_Repeat	192811	192845	61	+	.	.
scaffold631	subtractBed	intrn	199021	199321	.	-	.	Parent=CGI_10014175;
	scaffold631	TRF	Tandem_Repeat	199021	199321	286	+	.	.
scaffold631	subtractBed	intrn	202491	202603	.	-	.	Parent=CGI_10014176;
	scaffold631	TRF	Tandem_Repeat	202491	202603	84	+	.	.
scaffold631	subtractBed	intrn	204968	205072	.	-	.	Parent=CGI_10014176;
	scaffold631	TRF	Tandem_Repeat	204968	205072	104	+	.	.
scaffold631	subtractBed	intrn	205468	205561	.	-	.	Parent=CGI_10014176;
	scaffold631	TRF	Tandem_Repeat	205468	205561	127	+	.	.
scaffold631	subtractBed	intrn	208426	208471	.	-	.	Parent=CGI_10014176;
	scaffold631	TRF	Tandem_Repeat	208426	208471	92	+	.	.
scaffold631	subtractBed	intrn	211337	211588	.	+	.	Parent=CGI_10014177;
	scaffold631	TRF	Tandem_Repeat	211337	211588	409	+	.	.
scaffold631	subtractBed	intrn	220342	221146	.	-	.	Parent=CGI_10014178;
	scaffold631	TRF	Tandem_Repeat	220342	221146	1312	+	.	.
scaffold631	subtractBed	intrn	224978	225652	.	-	.	Parent=CGI_10014178;
	scaffold631	WUBlastX	LINE_RTE-X	224978	225652	140	+	.	.
scaffold631	subtractBed	intrn	224940	225005	.	-	.	Parent=CGI_10014178;
	scaffold631	WUBlastX	LINE_RTE-X	224940	225005	42	+	.	.
scaffold631	subtractBed	intrn	224578	224931	.	-	.	Parent=CGI_10014178;
	scaffold631	WUBlastX	LINE_RTE-X	224578	224931	31	+	.	.
scaffold631	subtractBed	intrn	224656	224961	.	-	.	Parent=CGI_10014178;
	scaffold631	WUBlastX	LINE_RTE-X	224656	224961	69	+	.	.
scaffold631	subtractBed	intrn	224650	224889	.	-	.	Parent=CGI_10014178;
	scaffold631	WUBlastX	LINE_RTE-X	224650	224889	87	+	.	.
scaffold631	subtractBed	intrn	246313	246363	.	+	.	Parent=CGI_10014179;
	scaffold631	TRF	Tandem_Repeat	246313	246363	102	+	.	.
scaffold631	subtractBed	intrn	308400	308519	.	-	.	Parent=CGI_10014186;
	scaffold631	TRF	Tandem_Repeat	308400	308519	222	+	.	.
scaffold631	subtractBed	intrn	314264	316077	.	-	.	Parent=CGI_10014187;
	scaffold631	WUBlastX	LINE_RTE-X	314264	317551	813	-	.	.
scaffold631	subtractBed	intrn	314147	314899	.	-	.	Parent=CGI_10014187;
	scaffold631	WUBlastX	LINE_RTE-X	314147	314899	70	-	.	.
scaffold631	subtractBed	intrn	363816	364101	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	363816	364101	344	+	.	.
scaffold631	subtractBed	intrn	364727	365391	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	364727	365391	303	+	.	.
scaffold631	subtractBed	intrn	364719	365338	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	364719	365338	395	+	.	.
scaffold631	subtractBed	intrn	364727	365391	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	364727	365391	364	+	.	.
scaffold631	subtractBed	intrn	366392	366445	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	366392	366445	81	+	.	.
scaffold631	subtractBed	intrn	367898	367933	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	367898	367933	72	+	.	.
scaffold631	subtractBed	intrn	368312	368361	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	368312	368361	75	+	.	.
scaffold631	subtractBed	intrn	378431	378497	.	+	.	Parent=CGI_10014192;
	scaffold631	TRF	Tandem_Repeat	378431	378497	71	+	.	.
scaffold632	subtractBed	intrn	5536	5573	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	5536	5573	76	+	.	.
scaffold632	subtractBed	intrn	9442	9507	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	9442	9507	132	+	.	.
scaffold632	subtractBed	intrn	13480	13523	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	13480	13523	88	+	.	.
scaffold632	subtractBed	intrn	14378	14423	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	14378	14423	92	+	.	.
scaffold632	subtractBed	intrn	14555	14596	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	14555	14596	77	+	.	.
scaffold632	subtractBed	intrn	18600	18938	.	+	.	Parent=CGI_10018432;
	scaffold632	TRF	Tandem_Repeat	18600	18938	505	+	.	.
scaffold632	subtractBed	intrn	74205	74252	.	+	.	Parent=CGI_10018436;
	scaffold632	TRF	Tandem_Repeat	74205	74252	96	+	.	.
scaffold632	subtractBed	intrn	94552	95134	.	+	.	Parent=CGI_10018438;
	scaffold632	WUBlastX	LTR_Pao	94232	95134	101	+	.	.
scaffold632	subtractBed	intrn	94565	98128	.	+	.	Parent=CGI_10018438;
	scaffold632	WUBlastX	LTR_Pao	94565	98128	2301	+	.	.
scaffold632	subtractBed	intrn	100636	100744	.	+	.	Parent=CGI_10018438;
	scaffold632	TRF	Tandem_Repeat	100636	100744	157	+	.	.
scaffold632	subtractBed	intrn	101296	101383	.	+	.	Parent=CGI_10018438;
	scaffold632	TRF	Tandem_Repeat	101296	101383	149	+	.	.
scaffold632	subtractBed	intrn	102139	102180	.	+	.	Parent=CGI_10018438;
	scaffold632	TRF	Tandem_Repeat	102139	102180	84	+	.	.
scaffold632	subtractBed	intrn	102810	102892	.	+	.	Parent=CGI_10018438;
	scaffold632	TRF	Tandem_Repeat	102810	102892	148	+	.	.
scaffold632	subtractBed	intrn	106074	106455	.	+	.	Parent=CGI_10018438;
	scaffold632	TRF	Tandem_Repeat	106074	106455	466	+	.	.
scaffold632	subtractBed	intrn	102810	102892	.	-	.	Parent=CGI_10018439;
	scaffold632	TRF	Tandem_Repeat	102810	102892	148	+	.	.
scaffold632	subtractBed	intrn	106074	106455	.	-	.	Parent=CGI_10018439;
	scaffold632	TRF	Tandem_Repeat	106074	106455	466	+	.	.
scaffold632	subtractBed	intrn	184194	184361	.	+	.	Parent=CGI_10018444;
	scaffold632	TRF	Tandem_Repeat	184194	184361	160	+	.	.
scaffold632	subtractBed	intrn	195672	196031	.	+	.	Parent=CGI_10018445;
	scaffold632	TRF	Tandem_Repeat	195672	196031	456	+	.	.
scaffold632	subtractBed	intrn	204886	204973	.	+	.	Parent=CGI_10018446;
	scaffold632	TRF	Tandem_Repeat	204886	204973	149	+	.	.
scaffold632	subtractBed	intrn	205706	205884	.	+	.	Parent=CGI_10018446;
	scaffold632	TRF	Tandem_Repeat	205706	205884	322	+	.	.
scaffold632	subtractBed	intrn	206369	206412	.	+	.	Parent=CGI_10018446;
	scaffold632	TRF	Tandem_Repeat	206369	206412	88	+	.	.
scaffold632	subtractBed	intrn	208023	208366	.	+	.	Parent=CGI_10018446;
	scaffold632	TRF	Tandem_Repeat	208023	208366	517	+	.	.
scaffold632	subtractBed	intrn	212750	212916	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	212750	212916	129	+	.	.
scaffold632	subtractBed	intrn	213036	213391	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	213036	213391	276	+	.	.
scaffold632	subtractBed	intrn	213420	213610	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	213420	213610	269	+	.	.
scaffold632	subtractBed	intrn	213647	214086	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	213647	214086	193	+	.	.
scaffold632	subtractBed	intrn	213714	214086	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	213714	214086	447	+	.	.
scaffold632	subtractBed	intrn	214541	214693	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	214541	214693	109	+	.	.
scaffold632	subtractBed	intrn	216318	216360	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	216318	216360	86	+	.	.
scaffold632	subtractBed	intrn	216395	216429	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	216395	216429	70	+	.	.
scaffold632	subtractBed	intrn	216791	216868	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	216791	216868	156	+	.	.
scaffold632	subtractBed	intrn	218383	218987	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	218383	218987	834	+	.	.
scaffold632	subtractBed	intrn	218383	218993	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	218383	218993	892	+	.	.
scaffold632	subtractBed	intrn	222043	222231	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	222043	222231	369	+	.	.
scaffold632	subtractBed	intrn	223527	223607	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	223527	223607	146	+	.	.
scaffold632	subtractBed	intrn	229433	229464	.	+	.	Parent=CGI_10018447;
	scaffold632	TRF	Tandem_Repeat	229433	229464	64	+	.	.
scaffold632	subtractBed	intrn	253050	253141	.	+	.	Parent=CGI_10018448;
	scaffold632	TRF	Tandem_Repeat	253050	253141	150	+	.	.
scaffold632	subtractBed	intrn	272460	274405	.	+	.	Parent=CGI_10018450;
	scaffold632	WUBlastX	LINE_RTE-X	271793	274405	843	+	.	.
scaffold632	subtractBed	intrn	274500	274961	.	+	.	Parent=CGI_10018450;
	scaffold632	WUBlastX	LINE_RTE-X	274500	274961	140	+	.	.
scaffold632	subtractBed	intrn	274425	275033	.	+	.	Parent=CGI_10018450;
	scaffold632	WUBlastX	LINE_RTE-X	274425	275033	124	+	.	.
scaffold632	subtractBed	intrn	272585	274468	.	+	.	Parent=CGI_10018450;
	scaffold632	WUBlastX	LINE_RTE-X	272585	274468	957	+	.	.
scaffold632	subtractBed	intrn	282037	282061	.	+	.	Parent=CGI_10018451;
	scaffold632	TRF	Tandem_Repeat	282037	282061	50	+	.	.
scaffold632	subtractBed	intrn	320474	320754	.	+	.	Parent=CGI_10018454;
	scaffold632	TRF	Tandem_Repeat	320474	320754	367	+	.	.
scaffold632	subtractBed	intrn	320828	320953	.	+	.	Parent=CGI_10018454;
	scaffold632	TRF	Tandem_Repeat	320828	320953	139	+	.	.
scaffold632	subtractBed	intrn	320987	321175	.	+	.	Parent=CGI_10018454;
	scaffold632	TRF	Tandem_Repeat	320987	321175	207	+	.	.
scaffold632	subtractBed	intrn	324489	324926	.	+	.	Parent=CGI_10018454;
	scaffold632	TRF	Tandem_Repeat	324472	324926	479	+	.	.
scaffold632	subtractBed	intrn	348330	348496	.	+	.	Parent=CGI_10018456;
	scaffold632	TRF	Tandem_Repeat	348330	348496	140	+	.	.
scaffold632	subtractBed	intrn	384224	385055	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	384224	385055	1075	+	.	.
scaffold632	subtractBed	intrn	391390	391420	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	391390	391420	62	+	.	.
scaffold632	subtractBed	intrn	392291	392329	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	392291	392329	53	+	.	.
scaffold632	subtractBed	intrn	394295	394640	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	394295	394640	185	+	.	.
scaffold632	subtractBed	intrn	401673	402037	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	401673	402037	387	+	.	.
scaffold632	subtractBed	intrn	405709	405760	.	-	.	Parent=CGI_10018457;
	scaffold632	TRF	Tandem_Repeat	405709	405760	52	+	.	.
scaffold632	subtractBed	intrn	483426	483692	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	483426	483692	181	+	.	.
scaffold632	subtractBed	intrn	482905	483102	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	482905	483102	50	-	.	.
scaffold632	subtractBed	intrn	483695	484015	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	483695	484015	219	+	.	.
scaffold632	subtractBed	intrn	484036	484575	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	484036	484575	183	+	.	.
scaffold632	subtractBed	intrn	484649	485137	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	484649	485137	40	+	.	.
scaffold632	subtractBed	intrn	483360	483686	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1	483360	483686	82	+	.	.
scaffold632	subtractBed	intrn	483310	483345	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	483310	483345	22	+	.	.
scaffold632	subtractBed	intrn	482780	483162	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1	482773	483162	42	-	.	.
scaffold632	subtractBed	intrn	485814	486158	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1-Tx1	485814	486158	70	+	.	.
scaffold632	subtractBed	intrn	485766	486173	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1	485766	486173	42	+	.	.
scaffold632	subtractBed	intrn	482780	482964	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1	482773	482964	63	-	.	.
scaffold632	subtractBed	intrn	492969	493708	.	-	.	Parent=CGI_10018460;
	scaffold632	TRF	Tandem_Repeat	492969	493708	848	+	.	.
scaffold632	subtractBed	intrn	494347	494781	.	-	.	Parent=CGI_10018460;
	scaffold632	TRF	Tandem_Repeat	494347	494781	556	+	.	.
scaffold632	subtractBed	intrn	502654	502876	.	-	.	Parent=CGI_10018460;
	scaffold632	TRF	Tandem_Repeat	502654	502876	446	+	.	.
scaffold632	subtractBed	intrn	512442	512500	.	-	.	Parent=CGI_10018460;
	scaffold632	TRF	Tandem_Repeat	512442	512500	118	+	.	.
scaffold632	subtractBed	intrn	511258	511317	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	511258	511317	22	-	.	.
scaffold632	subtractBed	intrn	510186	511268	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1-L2	510186	511268	589	-	.	.
scaffold632	subtractBed	intrn	512617	512727	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	512617	512727	48	-	.	.
scaffold632	subtractBed	intrn	512605	512808	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	512605	512808	38	-	.	.
scaffold632	subtractBed	intrn	511376	511618	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1-L2	511376	511618	59	-	.	.
scaffold632	subtractBed	intrn	512581	512712	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	512581	512712	35	-	.	.
scaffold632	subtractBed	intrn	512075	512122	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	512075	512122	22	-	.	.
scaffold632	subtractBed	intrn	512090	512128	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L1	512090	512128	21	-	.	.
scaffold632	subtractBed	intrn	511304	511612	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1	511304	511612	40	-	.	.
scaffold632	subtractBed	intrn	511602	511799	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1-L2	511602	511799	98	-	.	.
scaffold632	subtractBed	intrn	512635	512727	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	512635	512727	64	-	.	.
scaffold632	subtractBed	intrn	511617	511838	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1-L2	511617	511838	90	-	.	.
scaffold632	subtractBed	intrn	509467	510576	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_L2	509467	510576	215	-	.	.
scaffold632	subtractBed	intrn	511810	511959	.	-	.	Parent=CGI_10018460;
	scaffold632	WUBlastX	LINE_CR1-L2	511810	511959	27	-	.	.
scaffold632	subtractBed	intrn	539275	539312	.	-	.	Parent=CGI_10018463;
	scaffold632	TRF	Tandem_Repeat	539275	539312	58	+	.	.
scaffold632	subtractBed	intrn	541959	542005	.	-	.	Parent=CGI_10018463;
	scaffold632	TRF	Tandem_Repeat	541959	542005	62	+	.	.
scaffold632	subtractBed	intrn	543207	544074	.	-	.	Parent=CGI_10018463;
	scaffold632	TRF	Tandem_Repeat	543207	544074	1479	+	.	.
scaffold632	subtractBed	intrn	547170	547222	.	-	.	Parent=CGI_10018463;
	scaffold632	TRF	Tandem_Repeat	547170	547222	106	+	.	.
scaffold633	subtractBed	intrn	19991	21067	.	-	.	Parent=CGI_10004268;
	scaffold633	WUBlastX	LINE_L1-Tx1	19991	21067	158	+	.	.
scaffold633	subtractBed	intrn	20207	21493	.	-	.	Parent=CGI_10004268;
	scaffold633	WUBlastX	LINE_L1-Tx1	20207	21493	425	+	.	.
scaffold633	subtractBed	intrn	27059	27085	.	-	.	Parent=CGI_10004268;
	scaffold633	TRF	Tandem_Repeat	27059	27085	54	+	.	.
scaffold633	subtractBed	intrn	56822	57517	.	+	.	Parent=CGI_10004269;
	scaffold633	WUBlastX	LINE_L2	56822	57517	117	+	.	.
scaffold633	subtractBed	intrn	54078	54476	.	+	.	Parent=CGI_10004269;
	scaffold633	WUBlastX	LINE_Penelope	54078	54476	43	-	.	.
scaffold633	subtractBed	intrn	56639	57370	.	+	.	Parent=CGI_10004269;
	scaffold633	WUBlastX	LINE_L1	56639	57370	35	+	.	.
scaffold633	subtractBed	intrn	56924	57457	.	+	.	Parent=CGI_10004269;
	scaffold633	WUBlastX	LINE_L2	56924	57457	134	+	.	.
scaffold634	subtractBed	intrn	14984	15697	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy	14984	15697	57	-	.	.
scaffold634	subtractBed	intrn	14250	14629	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy	14207	14629	95	-	.	.
scaffold634	subtractBed	intrn	15020	15559	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy-Cigr	15020	15559	175	-	.	.
scaffold634	subtractBed	intrn	14255	14755	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy	14255	14755	66	-	.	.
scaffold634	subtractBed	intrn	14250	14698	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy	14117	14698	54	-	.	.
scaffold634	subtractBed	intrn	14792	15538	.	+	.	Parent=CGI_10004698;
	scaffold634	WUBlastX	LTR_Gypsy	14792	15538	131	-	.	.
scaffold634	subtractBed	intrn	16755	16779	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	16755	16779	50	+	.	.
scaffold634	subtractBed	intrn	18018	18097	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	18018	18097	160	+	.	.
scaffold634	subtractBed	intrn	28570	28733	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	28570	28733	202	+	.	.
scaffold634	subtractBed	intrn	28575	28758	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	28575	28758	199	+	.	.
scaffold634	subtractBed	intrn	28794	28968	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	28794	28968	127	+	.	.
scaffold634	subtractBed	intrn	28837	28969	.	+	.	Parent=CGI_10004698;
	scaffold634	TRF	Tandem_Repeat	28837	28969	151	+	.	.
scaffold634	subtractBed	intrn	14984	15697	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy	14984	15697	57	-	.	.
scaffold634	subtractBed	intrn	14250	14629	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy	14207	14629	95	-	.	.
scaffold634	subtractBed	intrn	15020	15559	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy-Cigr	15020	15559	175	-	.	.
scaffold634	subtractBed	intrn	14255	14755	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy	14255	14755	66	-	.	.
scaffold634	subtractBed	intrn	14250	14698	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy	14117	14698	54	-	.	.
scaffold634	subtractBed	intrn	14792	15538	.	-	.	Parent=CGI_10004699;
	scaffold634	WUBlastX	LTR_Gypsy	14792	15538	131	-	.	.
scaffold635	subtractBed	intrn	10245	10294	.	-	.	Parent=CGI_10008917;
	scaffold635	TRF	Tandem_Repeat	10245	10294	75	+	.	.
scaffold635	subtractBed	intrn	11094	11190	.	-	.	Parent=CGI_10008917;
	scaffold635	TRF	Tandem_Repeat	11094	11190	117	+	.	.
scaffold635	subtractBed	intrn	29128	29472	.	-	.	Parent=CGI_10008917;
	scaffold635	TRF	Tandem_Repeat	29128	29472	406	+	.	.
scaffold635	subtractBed	intrn	30973	31224	.	-	.	Parent=CGI_10008917;
	scaffold635	TRF	Tandem_Repeat	30973	31224	330	+	.	.
scaffold635	subtractBed	intrn	30973	31266	.	-	.	Parent=CGI_10008917;
	scaffold635	TRF	Tandem_Repeat	30973	31266	305	+	.	.
scaffold635	subtractBed	intrn	58022	58090	.	-	.	Parent=CGI_10008919;
	scaffold635	WUBlastX	DNA_hAT	57779	58090	59	-	.	.
scaffold635	subtractBed	intrn	117786	117965	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy-Cigr	117786	117965	70	-	.	.
scaffold635	subtractBed	intrn	117822	117965	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy-Cigr	117822	117965	85	-	.	.
scaffold635	subtractBed	intrn	117822	118010	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	117822	118010	75	-	.	.
scaffold635	subtractBed	intrn	115861	116391	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	115861	116391	221	-	.	.
scaffold635	subtractBed	intrn	116354	116488	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	116354	116488	98	-	.	.
scaffold635	subtractBed	intrn	116683	116775	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	116683	116775	22	-	.	.
scaffold635	subtractBed	intrn	115768	116355	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	115768	116355	172	-	.	.
scaffold635	subtractBed	intrn	116393	116611	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	116393	116611	41	-	.	.
scaffold635	subtractBed	intrn	116592	116681	.	-	.	Parent=CGI_10008922;
	scaffold635	WUBlastX	LTR_Gypsy	116592	116681	22	-	.	.
scaffold635	subtractBed	intrn	148760	148795	.	+	.	Parent=CGI_10008924;
	scaffold635	TRF	Tandem_Repeat	148760	148795	72	+	.	.
scaffold635	subtractBed	intrn	165192	165253	.	+	.	Parent=CGI_10008926;
	scaffold635	TRF	Tandem_Repeat	165192	165253	56	+	.	.
scaffold636	subtractBed	intrn	1490	1563	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	1490	1563	148	+	.	.
scaffold636	subtractBed	intrn	6099	6991	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	6099	6991	918	+	.	.
scaffold636	subtractBed	intrn	7854	7890	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	7854	7890	65	+	.	.
scaffold636	subtractBed	intrn	8687	9492	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	8687	9492	1328	+	.	.
scaffold636	subtractBed	intrn	12022	12797	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	12022	12797	1040	+	.	.
scaffold636	subtractBed	intrn	14458	14843	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	14458	14843	476	+	.	.
scaffold636	subtractBed	intrn	14899	14989	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	14899	14989	146	+	.	.
scaffold636	subtractBed	intrn	14955	15044	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	14955	15044	99	+	.	.
scaffold636	subtractBed	intrn	16643	16749	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	16643	16749	142	+	.	.
scaffold636	subtractBed	intrn	16804	17040	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	16804	17040	465	+	.	.
scaffold636	subtractBed	intrn	19947	20166	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	19914	20166	488	+	.	.
scaffold636	subtractBed	intrn	21224	21376	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	21224	21376	252	+	.	.
scaffold636	subtractBed	intrn	21822	22254	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	21822	22254	724	+	.	.
scaffold636	subtractBed	intrn	22369	22402	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	22369	22402	52	+	.	.
scaffold636	subtractBed	intrn	27167	27424	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	27167	27424	285	+	.	.
scaffold636	subtractBed	intrn	37003	37277	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	37003	37277	433	+	.	.
scaffold636	subtractBed	intrn	38519	38724	.	+	.	Parent=CGI_10003733;
	scaffold636	TRF	Tandem_Repeat	38519	38724	324	+	.	.
scaffold64	subtractBed	intrn	1321	1444	.	-	.	Parent=CGI_10005749;
	scaffold64	TRF	Tandem_Repeat	1321	1444	230	+	.	.
scaffold64	subtractBed	intrn	40024	40057	.	+	.	Parent=CGI_10005750;
	scaffold64	TRF	Tandem_Repeat	40024	40057	68	+	.	.
scaffold64	subtractBed	intrn	40024	40057	.	-	.	Parent=CGI_10005751;
	scaffold64	TRF	Tandem_Repeat	40024	40057	68	+	.	.
scaffold64	subtractBed	intrn	52960	52992	.	-	.	Parent=CGI_10005751;
	scaffold64	TRF	Tandem_Repeat	52960	52992	57	+	.	.
scaffold64	subtractBed	intrn	119817	120026	.	-	.	Parent=CGI_10005753;
	scaffold64	WUBlastX	DNA_Harbinger	119817	120026	72	+	.	.
scaffold64	subtractBed	intrn	124610	125065	.	-	.	Parent=CGI_10005753;
	scaffold64	WUBlastX	DNA_Harbinger	124610	125065	301	+	.	.
scaffold64	subtractBed	intrn	127225	127548	.	-	.	Parent=CGI_10005753;
	scaffold64	WUBlastX	DNA_Harbinger	127225	127548	155	-	.	.
scaffold640	subtractBed	intrn	15227	15288	.	-	.	Parent=CGI_10007636;
	scaffold640	TRF	Tandem_Repeat	15227	15288	115	+	.	.
scaffold640	subtractBed	intrn	15286	15315	.	-	.	Parent=CGI_10007636;
	scaffold640	TRF	Tandem_Repeat	15286	15315	60	+	.	.
scaffold640	subtractBed	intrn	28391	28433	.	-	.	Parent=CGI_10007636;
	scaffold640	TRF	Tandem_Repeat	28391	28433	86	+	.	.
scaffold640	subtractBed	intrn	31192	31232	.	-	.	Parent=CGI_10007636;
	scaffold640	TRF	Tandem_Repeat	31192	31232	82	+	.	.
scaffold643	subtractBed	intrn	17691	17738	.	-	.	Parent=CGI_10002914;
	scaffold643	TRF	Tandem_Repeat	17691	17738	96	+	.	.
scaffold643	subtractBed	intrn	18078	18112	.	-	.	Parent=CGI_10002914;
	scaffold643	TRF	Tandem_Repeat	18078	18112	61	+	.	.
scaffold643	subtractBed	intrn	31798	31854	.	+	.	Parent=CGI_10002915;
	scaffold643	TRF	Tandem_Repeat	31798	31854	114	+	.	.
scaffold644	subtractBed	intrn	14216	14271	.	+	.	Parent=CGI_10004148;
	scaffold644	TRF	Tandem_Repeat	14216	14271	112	+	.	.
scaffold644	subtractBed	intrn	34251	34304	.	-	.	Parent=CGI_10004150;
	scaffold644	TRF	Tandem_Repeat	34251	34304	99	+	.	.
scaffold645	subtractBed	intrn	2961	3368	.	+	.	Parent=CGI_10003781;
	scaffold645	TRF	Tandem_Repeat	2961	3368	798	+	.	.
scaffold647	subtractBed	intrn	48170	48205	.	+	.	Parent=CGI_10006923;
	scaffold647	TRF	Tandem_Repeat	48170	48205	72	+	.	.
scaffold647	subtractBed	intrn	58696	58767	.	-	.	Parent=CGI_10006924;
	scaffold647	TRF	Tandem_Repeat	58696	58793	178	+	.	.
scaffold647	subtractBed	intrn	86359	86420	.	-	.	Parent=CGI_10006925;
	scaffold647	TRF	Tandem_Repeat	86359	86420	65	+	.	.
scaffold647	subtractBed	intrn	101607	101674	.	-	.	Parent=CGI_10006928;
	scaffold647	TRF	Tandem_Repeat	101607	101674	102	+	.	.
scaffold647	subtractBed	intrn	104880	104910	.	+	.	Parent=CGI_10006929;
	scaffold647	TRF	Tandem_Repeat	104880	104910	62	+	.	.
scaffold647	subtractBed	intrn	126241	126734	.	+	.	Parent=CGI_10006931;
	scaffold647	TRF	Tandem_Repeat	126241	126734	988	+	.	.
scaffold647	subtractBed	intrn	127188	127221	.	+	.	Parent=CGI_10006931;
	scaffold647	TRF	Tandem_Repeat	127188	127221	68	+	.	.
scaffold647	subtractBed	intrn	130403	130768	.	+	.	Parent=CGI_10006931;
	scaffold647	TRF	Tandem_Repeat	130403	130768	405	+	.	.
scaffold647	subtractBed	intrn	133417	133472	.	+	.	Parent=CGI_10006931;
	scaffold647	TRF	Tandem_Repeat	133417	133472	55	+	.	.
scaffold647	subtractBed	intrn	135235	135284	.	+	.	Parent=CGI_10006931;
	scaffold647	TRF	Tandem_Repeat	135235	135284	100	+	.	.
scaffold647	subtractBed	intrn	136568	137107	.	+	.	Parent=CGI_10006931;
	scaffold647	WUBlastX	LINE_L1-Tx1	136568	137107	248	-	.	.
scaffold647	subtractBed	intrn	135378	135710	.	+	.	Parent=CGI_10006931;
	scaffold647	WUBlastX	LINE_L1-Tx1	135378	135710	32	-	.	.
scaffold647	subtractBed	intrn	136466	137089	.	+	.	Parent=CGI_10006931;
	scaffold647	WUBlastX	LINE_L1-Tx1	136466	137089	129	-	.	.
scaffold65	subtractBed	intrn	75824	76063	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	75805	76063	293	+	.	.
scaffold65	subtractBed	intrn	75950	76037	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	75950	76037	50	+	.	.
scaffold65	subtractBed	intrn	76523	76564	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	76523	76564	84	+	.	.
scaffold65	subtractBed	intrn	82708	82742	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	82708	82742	70	+	.	.
scaffold65	subtractBed	intrn	82893	82942	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	82893	82942	64	+	.	.
scaffold65	subtractBed	intrn	84936	85032	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	84936	85032	104	+	.	.
scaffold65	subtractBed	intrn	86899	87024	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	86875	87024	89	+	.	.
scaffold65	subtractBed	intrn	86899	87016	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	86891	87016	108	+	.	.
scaffold65	subtractBed	intrn	100048	100549	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	100048	100549	782	+	.	.
scaffold65	subtractBed	intrn	100048	100545	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	100048	100545	763	+	.	.
scaffold65	subtractBed	intrn	101712	101969	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	101712	101969	275	+	.	.
scaffold65	subtractBed	intrn	104490	105018	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	104490	105018	871	+	.	.
scaffold65	subtractBed	intrn	106233	106819	.	+	.	Parent=CGI_10006430;
	scaffold65	TRF	Tandem_Repeat	106233	106819	961	+	.	.
scaffold65	subtractBed	intrn	144372	144418	.	-	.	Parent=CGI_10006431;
	scaffold65	TRF	Tandem_Repeat	144372	144418	94	+	.	.
scaffold654	subtractBed	intrn	2148	2204	.	-	.	Parent=CGI_10004182;
	scaffold654	TRF	Tandem_Repeat	2148	2204	105	+	.	.
scaffold654	subtractBed	intrn	3469	3660	.	-	.	Parent=CGI_10004182;
	scaffold654	WUBlastX	LINE_RTE-X	3469	3660	27	+	.	.
scaffold654	subtractBed	intrn	8495	8572	.	-	.	Parent=CGI_10004182;
	scaffold654	TRF	Tandem_Repeat	8495	8572	140	+	.	.
scaffold654	subtractBed	intrn	10796	10910	.	-	.	Parent=CGI_10004182;
	scaffold654	TRF	Tandem_Repeat	10796	10910	83	+	.	.
scaffold654	subtractBed	intrn	85661	85704	.	-	.	Parent=CGI_10004186;
	scaffold654	TRF	Tandem_Repeat	85661	85704	88	+	.	.
scaffold655	subtractBed	intrn	206673	206752	.	+	.	Parent=CGI_10014952;
	scaffold655	WUBlastX	LINE_L1	206657	206752	22	+	.	.
scaffold655	subtractBed	intrn	208155	210845	.	+	.	Parent=CGI_10014952;
	scaffold655	WUBlastX	LINE_L1-Tx1	208155	210845	1239	+	.	.
scaffold655	subtractBed	intrn	207939	209108	.	+	.	Parent=CGI_10014952;
	scaffold655	WUBlastX	LINE_CR1	207939	209108	28	+	.	.
scaffold655	subtractBed	intrn	252608	252757	.	-	.	Parent=CGI_10014955;
	scaffold655	TRF	Tandem_Repeat	252608	252757	273	+	.	.
scaffold655	subtractBed	intrn	255507	255555	.	-	.	Parent=CGI_10014955;
	scaffold655	TRF	Tandem_Repeat	255507	255555	98	+	.	.
scaffold655	subtractBed	intrn	257128	257173	.	-	.	Parent=CGI_10014955;
	scaffold655	TRF	Tandem_Repeat	257128	257173	92	+	.	.
scaffold655	subtractBed	intrn	278520	278556	.	-	.	Parent=CGI_10014957;
	scaffold655	TRF	Tandem_Repeat	278520	278556	67	+	.	.
scaffold655	subtractBed	intrn	285769	285802	.	-	.	Parent=CGI_10014957;
	scaffold655	TRF	Tandem_Repeat	285769	285802	68	+	.	.
scaffold655	subtractBed	intrn	289345	289377	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	289345	289377	66	+	.	.
scaffold655	subtractBed	intrn	307212	307256	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	307212	307256	90	+	.	.
scaffold655	subtractBed	intrn	308035	308148	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	308035	308148	143	+	.	.
scaffold655	subtractBed	intrn	308644	308690	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	308644	308690	69	+	.	.
scaffold655	subtractBed	intrn	308772	309151	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	308772	309151	519	+	.	.
scaffold655	subtractBed	intrn	311920	311932	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_RTE-BovB	311920	312471	24	-	.	.
scaffold655	subtractBed	intrn	312352	312705	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_RTE-BovB	312352	312705	60	-	.	.
scaffold655	subtractBed	intrn	311990	312471	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_RTE-BovB	311920	312471	24	-	.	.
scaffold655	subtractBed	intrn	315731	315773	.	+	.	Parent=CGI_10014958;
	scaffold655	TRF	Tandem_Repeat	315731	315773	77	+	.	.
scaffold655	subtractBed	intrn	320876	321385	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_CR1-L2	320876	321385	214	-	.	.
scaffold655	subtractBed	intrn	318302	318880	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_CR1	318302	318880	90	-	.	.
scaffold655	subtractBed	intrn	316551	316769	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_CR1-L2	316551	316769	22	-	.	.
scaffold655	subtractBed	intrn	319781	320056	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_CR1-L2	319781	320056	22	-	.	.
scaffold655	subtractBed	intrn	316428	316733	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_L2	316428	316733	62	-	.	.
scaffold655	subtractBed	intrn	317070	318479	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_L2	317070	318479	427	-	.	.
scaffold655	subtractBed	intrn	318302	318766	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_L2	318302	318766	239	-	.	.
scaffold655	subtractBed	intrn	318970	319449	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_L2	318970	319449	148	-	.	.
scaffold655	subtractBed	intrn	319454	319960	.	+	.	Parent=CGI_10014958;
	scaffold655	WUBlastX	LINE_L2	319454	319960	128	-	.	.
scaffold655	subtractBed	intrn	342222	342266	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	342222	342266	54	+	.	.
scaffold655	subtractBed	intrn	342224	342260	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	342224	342260	65	+	.	.
scaffold655	subtractBed	intrn	343740	343785	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	343740	343785	83	+	.	.
scaffold655	subtractBed	intrn	346555	346824	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	346555	346824	454	+	.	.
scaffold655	subtractBed	intrn	347938	349057	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	347938	349057	1357	+	.	.
scaffold655	subtractBed	intrn	349228	349273	.	+	.	Parent=CGI_10014960;
	scaffold655	TRF	Tandem_Repeat	349228	349273	74	+	.	.
scaffold655	subtractBed	intrn	374190	374230	.	+	.	Parent=CGI_10014961;
	scaffold655	TRF	Tandem_Repeat	374190	374230	82	+	.	.
scaffold658	subtractBed	intrn	33372	34204	.	+	.	Parent=CGI_10018962;
	scaffold658	TRF	Tandem_Repeat	33372	34204	1108	+	.	.
scaffold658	subtractBed	intrn	99368	99395	.	-	.	Parent=CGI_10018964;
	scaffold658	TRF	Tandem_Repeat	99368	99395	56	+	.	.
scaffold658	subtractBed	intrn	106059	107309	.	-	.	Parent=CGI_10018964;
	scaffold658	WUBlastX	DNA_TcMar-Tc2	106059	107309	1014	+	.	.
scaffold658	subtractBed	intrn	123455	124248	.	-	.	Parent=CGI_10018964;
	scaffold658	TRF	Tandem_Repeat	123455	124256	913	+	.	.
scaffold658	subtractBed	intrn	140559	140598	.	-	.	Parent=CGI_10018966;
	scaffold658	TRF	Tandem_Repeat	140559	140598	62	+	.	.
scaffold658	subtractBed	intrn	171605	171677	.	-	.	Parent=CGI_10018967;
	scaffold658	TRF	Tandem_Repeat	171605	171677	130	+	.	.
scaffold658	subtractBed	intrn	171675	171713	.	-	.	Parent=CGI_10018967;
	scaffold658	TRF	Tandem_Repeat	171675	171713	78	+	.	.
scaffold658	subtractBed	intrn	232459	232632	.	+	.	Parent=CGI_10018968;
	scaffold658	WUBlastX	LINE_RTE-BovB	232459	232632	181	-	.	.
scaffold658	subtractBed	intrn	232486	232662	.	+	.	Parent=CGI_10018968;
	scaffold658	WUBlastX	LINE_RTE-BovB	232486	232662	76	-	.	.
scaffold658	subtractBed	intrn	307483	307538	.	+	.	Parent=CGI_10018969;
	scaffold658	TRF	Tandem_Repeat	307483	307538	103	+	.	.
scaffold658	subtractBed	intrn	405602	405849	.	+	.	Parent=CGI_10018972;
	scaffold658	TRF	Tandem_Repeat	405602	405849	55	+	.	.
scaffold659	subtractBed	intrn	6563	6595	.	+	.	Parent=CGI_10014692;
	scaffold659	TRF	Tandem_Repeat	6563	6595	57	+	.	.
scaffold659	subtractBed	intrn	8275	8313	.	+	.	Parent=CGI_10014692;
	scaffold659	TRF	Tandem_Repeat	8275	8313	78	+	.	.
scaffold659	subtractBed	intrn	9705	9747	.	+	.	Parent=CGI_10014692;
	scaffold659	TRF	Tandem_Repeat	9705	9747	50	+	.	.
scaffold659	subtractBed	intrn	9704	9738	.	+	.	Parent=CGI_10014692;
	scaffold659	TRF	Tandem_Repeat	9704	9738	56	+	.	.
scaffold659	subtractBed	intrn	11285	11635	.	+	.	Parent=CGI_10014692;
	scaffold659	WUBlastX	DNA_P	11285	11635	65	+	.	.
scaffold659	subtractBed	intrn	11805	12482	.	+	.	Parent=CGI_10014692;
	scaffold659	WUBlastX	DNA_IS4EU	11805	12482	296	+	.	.
scaffold659	subtractBed	intrn	12473	12715	.	+	.	Parent=CGI_10014692;
	scaffold659	WUBlastX	DNA_IS4EU	12473	12715	148	+	.	.
scaffold659	subtractBed	intrn	11285	11830	.	+	.	Parent=CGI_10014692;
	scaffold659	WUBlastX	DNA_P	11285	11830	29	+	.	.
scaffold659	subtractBed	intrn	14258	14575	.	+	.	Parent=CGI_10014692;
	scaffold659	WUBlastX	DNA_IS4EU	14258	14575	77	-	.	.
scaffold659	subtractBed	intrn	140565	140615	.	-	.	Parent=CGI_10014700;
	scaffold659	TRF	Tandem_Repeat	140565	140615	102	+	.	.
scaffold659	subtractBed	intrn	157184	158695	.	-	.	Parent=CGI_10014702;
	scaffold659	TRF	Tandem_Repeat	157184	158695	2098	+	.	.
scaffold659	subtractBed	intrn	158865	158930	.	-	.	Parent=CGI_10014702;
	scaffold659	TRF	Tandem_Repeat	158865	158930	71	+	.	.
scaffold659	subtractBed	intrn	160993	162027	.	-	.	Parent=CGI_10014702;
	scaffold659	TRF	Tandem_Repeat	160993	162027	1145	+	.	.
scaffold659	subtractBed	intrn	160993	162027	.	-	.	Parent=CGI_10014702;
	scaffold659	TRF	Tandem_Repeat	160993	162027	1196	+	.	.
scaffold659	subtractBed	intrn	212791	212859	.	+	.	Parent=CGI_10014705;
	scaffold659	TRF	Tandem_Repeat	212791	212859	138	+	.	.
scaffold659	subtractBed	intrn	218918	218961	.	+	.	Parent=CGI_10014705;
	scaffold659	TRF	Tandem_Repeat	218918	218961	88	+	.	.
scaffold659	subtractBed	intrn	279760	279804	.	-	.	Parent=CGI_10014708;
	scaffold659	TRF	Tandem_Repeat	279760	279804	90	+	.	.
scaffold659	subtractBed	intrn	369374	369648	.	+	.	Parent=CGI_10014715;
	scaffold659	TRF	Tandem_Repeat	369360	369648	485	+	.	.
scaffold659	subtractBed	intrn	375443	375481	.	+	.	Parent=CGI_10014715;
	scaffold659	TRF	Tandem_Repeat	375443	375481	78	+	.	.
scaffold66	subtractBed	intrn	14137	14170	.	-	.	Parent=CGI_10006190;
	scaffold66	TRF	Tandem_Repeat	14137	14170	50	+	.	.
scaffold66	subtractBed	intrn	14861	14944	.	-	.	Parent=CGI_10006190;
	scaffold66	TRF	Tandem_Repeat	14861	14944	107	+	.	.
scaffold66	subtractBed	intrn	16330	16361	.	-	.	Parent=CGI_10006190;
	scaffold66	TRF	Tandem_Repeat	16330	16361	64	+	.	.
scaffold66	subtractBed	intrn	17613	17647	.	-	.	Parent=CGI_10006190;
	scaffold66	TRF	Tandem_Repeat	17613	17647	70	+	.	.
scaffold66	subtractBed	intrn	112338	112442	.	+	.	Parent=CGI_10006192;
	scaffold66	WUBlastX	DNA_IS4EU	112338	112442	48	+	.	.
scaffold66	subtractBed	intrn	112472	112600	.	+	.	Parent=CGI_10006192;
	scaffold66	WUBlastX	DNA_IS4EU	112472	112600	27	+	.	.
scaffold66	subtractBed	intrn	114281	114337	.	+	.	Parent=CGI_10006192;
	scaffold66	TRF	Tandem_Repeat	114281	114337	51	+	.	.
scaffold66	subtractBed	intrn	114281	114337	.	-	.	Parent=CGI_10006193;
	scaffold66	TRF	Tandem_Repeat	114281	114337	51	+	.	.
scaffold66	subtractBed	intrn	118819	118864	.	-	.	Parent=CGI_10006193;
	scaffold66	TRF	Tandem_Repeat	118819	118864	92	+	.	.
scaffold660	subtractBed	intrn	7228	7498	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	7228	7498	373	+	.	.
scaffold660	subtractBed	intrn	7871	9124	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	7871	9124	1562	+	.	.
scaffold660	subtractBed	intrn	11813	12652	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	11813	12652	567	+	.	.
scaffold660	subtractBed	intrn	11879	12651	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	11879	12651	1060	+	.	.
scaffold660	subtractBed	intrn	19663	19936	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	19663	19936	395	+	.	.
scaffold660	subtractBed	intrn	20827	20944	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	20827	20944	122	+	.	.
scaffold660	subtractBed	intrn	30733	30984	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	30733	30984	362	+	.	.
scaffold660	subtractBed	intrn	31051	31184	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	31051	31184	114	+	.	.
scaffold660	subtractBed	intrn	31041	31163	.	+	.	Parent=CGI_10013747;
	scaffold660	TRF	Tandem_Repeat	31041	31163	120	+	.	.
scaffold660	subtractBed	intrn	51318	52741	.	-	.	Parent=CGI_10013748;
	scaffold660	TRF	Tandem_Repeat	51318	52741	1647	+	.	.
scaffold660	subtractBed	intrn	51318	52741	.	-	.	Parent=CGI_10013748;
	scaffold660	TRF	Tandem_Repeat	51318	52741	1571	+	.	.
scaffold660	subtractBed	intrn	54530	55483	.	-	.	Parent=CGI_10013748;
	scaffold660	TRF	Tandem_Repeat	54530	55483	1289	+	.	.
scaffold660	subtractBed	intrn	55514	55541	.	-	.	Parent=CGI_10013748;
	scaffold660	TRF	Tandem_Repeat	55514	55541	56	+	.	.
scaffold660	subtractBed	intrn	88074	88133	.	-	.	Parent=CGI_10013748;
	scaffold660	TRF	Tandem_Repeat	88074	88133	111	+	.	.
scaffold660	subtractBed	intrn	98898	99359	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_L1-Tx1	98898	99359	81	-	.	.
scaffold660	subtractBed	intrn	98868	99278	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_L1-Tx1	98868	99278	108	-	.	.
scaffold660	subtractBed	intrn	106995	107117	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_RTE-X	106995	107117	41	+	.	.
scaffold660	subtractBed	intrn	106971	107150	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_RTE-X	106971	107150	24	+	.	.
scaffold660	subtractBed	intrn	107646	107798	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_RTE-X	107646	107798	66	+	.	.
scaffold660	subtractBed	intrn	107232	107825	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_RTE-X	107232	107825	30	+	.	.
scaffold660	subtractBed	intrn	107646	107834	.	-	.	Parent=CGI_10013750;
	scaffold660	WUBlastX	LINE_RTE-X	107646	107834	51	+	.	.
scaffold660	subtractBed	intrn	137869	137905	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	137869	137905	65	+	.	.
scaffold660	subtractBed	intrn	136827	137003	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	DNA_Crypton	136827	137003	76	+	.	.
scaffold660	subtractBed	intrn	144782	145180	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	LINE_Penelope	144782	145180	45	+	.	.
scaffold660	subtractBed	intrn	148779	148815	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	148779	148815	74	+	.	.
scaffold660	subtractBed	intrn	154278	154324	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	154278	154324	94	+	.	.
scaffold660	subtractBed	intrn	155829	156029	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	LINE_RTE-BovB	155829	156029	235	+	.	.
scaffold660	subtractBed	intrn	155951	156259	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	LINE_RTE-BovB	155951	156259	240	+	.	.
scaffold660	subtractBed	intrn	156259	156339	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	LINE_RTE-BovB	156259	156339	58	+	.	.
scaffold660	subtractBed	intrn	156315	156758	.	-	.	Parent=CGI_10013751;
	scaffold660	WUBlastX	LINE_RTE-BovB	156315	156758	418	+	.	.
scaffold660	subtractBed	intrn	165321	165387	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	165321	165387	89	+	.	.
scaffold660	subtractBed	intrn	172717	172767	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	172717	172767	50	+	.	.
scaffold660	subtractBed	intrn	172729	172796	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	172729	172796	57	+	.	.
scaffold660	subtractBed	intrn	181562	181595	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	181562	181595	59	+	.	.
scaffold660	subtractBed	intrn	181656	181686	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	181656	181686	62	+	.	.
scaffold660	subtractBed	intrn	181684	181741	.	-	.	Parent=CGI_10013751;
	scaffold660	TRF	Tandem_Repeat	181684	181741	116	+	.	.
scaffold660	subtractBed	intrn	264970	265389	.	-	.	Parent=CGI_10013757;
	scaffold660	TRF	Tandem_Repeat	264970	265389	283	+	.	.
scaffold660	subtractBed	intrn	266036	266062	.	-	.	Parent=CGI_10013757;
	scaffold660	TRF	Tandem_Repeat	266036	266062	54	+	.	.
scaffold660	subtractBed	intrn	317794	317846	.	+	.	Parent=CGI_10013758;
	scaffold660	TRF	Tandem_Repeat	317794	317846	106	+	.	.
scaffold660	subtractBed	intrn	344881	344915	.	-	.	Parent=CGI_10013761;
	scaffold660	TRF	Tandem_Repeat	344881	344915	63	+	.	.
scaffold660	subtractBed	intrn	346967	347293	.	-	.	Parent=CGI_10013761;
	scaffold660	TRF	Tandem_Repeat	346967	347293	501	+	.	.
scaffold663	subtractBed	intrn	100758	103933	.	-	.	Parent=CGI_10005264;
	scaffold663	WUBlastX	LTR_Gypsy	100758	104693	2986	-	.	.
scaffold663	subtractBed	intrn	118432	118490	.	+	.	Parent=CGI_10005265;
	scaffold663	TRF	Tandem_Repeat	118432	118490	59	+	.	.
scaffold663	subtractBed	intrn	118813	118859	.	+	.	Parent=CGI_10005265;
	scaffold663	TRF	Tandem_Repeat	118813	118859	58	+	.	.
scaffold663	subtractBed	intrn	118812	118871	.	+	.	Parent=CGI_10005265;
	scaffold663	TRF	Tandem_Repeat	118812	118871	84	+	.	.
scaffold663	subtractBed	intrn	118821	118872	.	+	.	Parent=CGI_10005265;
	scaffold663	TRF	Tandem_Repeat	118821	118872	50	+	.	.
scaffold663	subtractBed	intrn	119232	119247	.	+	.	Parent=CGI_10005265;
	scaffold663	WUBlastX	LINE_RTE-X	119232	119402	32	-	.	.
scaffold664	subtractBed	intrn	10712	10749	.	+	.	Parent=CGI_10021433;
	scaffold664	TRF	Tandem_Repeat	10712	10749	58	+	.	.
scaffold664	subtractBed	intrn	72888	72916	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	72888	72916	58	+	.	.
scaffold664	subtractBed	intrn	74759	74816	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	74759	74816	62	+	.	.
scaffold664	subtractBed	intrn	94177	94292	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94177	94292	87	+	.	.
scaffold664	subtractBed	intrn	94160	94480	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94160	94480	132	+	.	.
scaffold664	subtractBed	intrn	94270	94470	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94270	94470	179	+	.	.
scaffold664	subtractBed	intrn	94162	94296	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94162	94296	115	+	.	.
scaffold664	subtractBed	intrn	94378	94468	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94378	94468	73	+	.	.
scaffold664	subtractBed	intrn	94614	94791	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94614	94791	286	+	.	.
scaffold664	subtractBed	intrn	94924	95206	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	94924	95206	566	+	.	.
scaffold664	subtractBed	intrn	96962	97083	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	96962	97083	158	+	.	.
scaffold664	subtractBed	intrn	99010	99182	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	99010	99182	175	+	.	.
scaffold664	subtractBed	intrn	102372	102459	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	102372	102459	90	+	.	.
scaffold664	subtractBed	intrn	103527	104189	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	103527	104189	684	+	.	.
scaffold664	subtractBed	intrn	103527	104186	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	103527	104186	697	+	.	.
scaffold664	subtractBed	intrn	103528	104189	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	103528	104189	821	+	.	.
scaffold664	subtractBed	intrn	105589	105700	.	+	.	Parent=CGI_10021435;
	scaffold664	TRF	Tandem_Repeat	105589	105700	79	+	.	.
scaffold664	subtractBed	intrn	114460	114500	.	-	.	Parent=CGI_10021436;
	scaffold664	TRF	Tandem_Repeat	114460	114500	64	+	.	.
scaffold664	subtractBed	intrn	126946	126977	.	+	.	Parent=CGI_10021437;
	scaffold664	TRF	Tandem_Repeat	126946	126977	64	+	.	.
scaffold664	subtractBed	intrn	137647	137702	.	+	.	Parent=CGI_10021437;
	scaffold664	TRF	Tandem_Repeat	137647	137702	112	+	.	.
scaffold664	subtractBed	intrn	148591	148672	.	-	.	Parent=CGI_10021438;
	scaffold664	TRF	Tandem_Repeat	148591	148672	121	+	.	.
scaffold664	subtractBed	intrn	148697	148732	.	-	.	Parent=CGI_10021438;
	scaffold664	TRF	Tandem_Repeat	148697	148732	72	+	.	.
scaffold664	subtractBed	intrn	218200	218229	.	+	.	Parent=CGI_10021440;
	scaffold664	TRF	Tandem_Repeat	218200	218229	51	+	.	.
scaffold664	subtractBed	intrn	218200	218250	.	+	.	Parent=CGI_10021440;
	scaffold664	TRF	Tandem_Repeat	218200	218250	66	+	.	.
scaffold664	subtractBed	intrn	218207	218249	.	+	.	Parent=CGI_10021440;
	scaffold664	TRF	Tandem_Repeat	218207	218249	50	+	.	.
scaffold664	subtractBed	intrn	215463	216107	.	+	.	Parent=CGI_10021440;
	scaffold664	WUBlastX	DNA_Sola	215463	216107	145	+	.	.
scaffold664	subtractBed	intrn	215370	216005	.	+	.	Parent=CGI_10021440;
	scaffold664	WUBlastX	DNA_Sola	215370	216005	172	+	.	.
scaffold664	subtractBed	intrn	214523	215217	.	+	.	Parent=CGI_10021440;
	scaffold664	WUBlastX	DNA_Sola	213358	215217	845	+	.	.
scaffold664	subtractBed	intrn	226223	226311	.	+	.	Parent=CGI_10021440;
	scaffold664	TRF	Tandem_Repeat	226223	226311	162	+	.	.
scaffold664	subtractBed	intrn	221013	221303	.	+	.	Parent=CGI_10021440;
	scaffold664	WUBlastX	LINE_CR1	221013	221303	74	-	.	.
scaffold664	subtractBed	intrn	220944	221450	.	+	.	Parent=CGI_10021440;
	scaffold664	WUBlastX	LINE_L1-Tx1	220944	221450	29	-	.	.
scaffold664	subtractBed	intrn	264244	264293	.	+	.	Parent=CGI_10021443;
	scaffold664	TRF	Tandem_Repeat	264244	264293	100	+	.	.
scaffold664	subtractBed	intrn	265686	265833	.	+	.	Parent=CGI_10021443;
	scaffold664	TRF	Tandem_Repeat	265686	265833	122	+	.	.
scaffold664	subtractBed	intrn	265686	265833	.	+	.	Parent=CGI_10021443;
	scaffold664	TRF	Tandem_Repeat	265686	265833	122	+	.	.
scaffold664	subtractBed	intrn	285738	285784	.	+	.	Parent=CGI_10021444;
	scaffold664	TRF	Tandem_Repeat	285738	285784	85	+	.	.
scaffold664	subtractBed	intrn	302359	302604	.	+	.	Parent=CGI_10021446;
	scaffold664	WUBlastX	LTR_Ngaro	302359	302604	139	-	.	.
scaffold664	subtractBed	intrn	304429	304548	.	+	.	Parent=CGI_10021446;
	scaffold664	TRF	Tandem_Repeat	304429	304548	163	+	.	.
scaffold664	subtractBed	intrn	305486	305639	.	+	.	Parent=CGI_10021446;
	scaffold664	TRF	Tandem_Repeat	305486	305639	68	+	.	.
scaffold664	subtractBed	intrn	305572	305685	.	+	.	Parent=CGI_10021446;
	scaffold664	TRF	Tandem_Repeat	305572	305685	113	+	.	.
scaffold664	subtractBed	intrn	377056	377326	.	-	.	Parent=CGI_10021447;
	scaffold664	TRF	Tandem_Repeat	377056	377326	506	+	.	.
scaffold664	subtractBed	intrn	393287	393658	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_Harbinger	393287	393658	125	-	.	.
scaffold664	subtractBed	intrn	393919	394272	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_TcMar-Tc1	393919	394272	107	-	.	.
scaffold664	subtractBed	intrn	394187	394393	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_TcMar-Marin	394187	394393	49	-	.	.
scaffold664	subtractBed	intrn	393946	394209	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_TcMar-Tc1	393946	394209	128	-	.	.
scaffold664	subtractBed	intrn	393850	394212	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_TcMar-Tc1	393850	394212	83	-	.	.
scaffold664	subtractBed	intrn	392824	393309	.	-	.	Parent=CGI_10021447;
	scaffold664	WUBlastX	DNA_Harbinger	392824	393309	174	-	.	.
scaffold664	subtractBed	intrn	443162	443186	.	-	.	Parent=CGI_10021450;
	scaffold664	TRF	Tandem_Repeat	443162	443186	50	+	.	.
scaffold664	subtractBed	intrn	493668	494001	.	-	.	Parent=CGI_10021452;
	scaffold664	WUBlastX	LTR_Gypsy	493594	494001	49	-	.	.
scaffold664	subtractBed	intrn	550878	551153	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	DNA_hAT-Tip100	550878	551153	57	+	.	.
scaffold664	subtractBed	intrn	548045	548482	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	LTR_Gypsy	548045	548482	56	+	.	.
scaffold664	subtractBed	intrn	558102	558110	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	DNA_Kolobok-Hyd	558102	558305	52	+	.	.
scaffold664	subtractBed	intrn	556961	557128	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	DNA_Kolobok-Hyd	556961	557128	41	+	.	.
scaffold664	subtractBed	intrn	558304	558305	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	DNA_Kolobok-Hyd	558102	558305	52	+	.	.
scaffold664	subtractBed	intrn	564980	565005	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	564980	565005	52	+	.	.
scaffold664	subtractBed	intrn	570003	570038	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	570003	570038	72	+	.	.
scaffold664	subtractBed	intrn	570037	570082	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	570037	570082	92	+	.	.
scaffold664	subtractBed	intrn	570080	570126	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	570080	570126	85	+	.	.
scaffold664	subtractBed	intrn	573657	573690	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	573657	573690	68	+	.	.
scaffold664	subtractBed	intrn	581417	581442	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	581417	581442	52	+	.	.
scaffold664	subtractBed	intrn	584205	584292	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	584205	584292	113	+	.	.
scaffold664	subtractBed	intrn	584260	584347	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	584260	584347	95	+	.	.
scaffold664	subtractBed	intrn	578596	578982	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	LINE_RTE-X	578596	578982	23	-	.	.
scaffold664	subtractBed	intrn	577896	578225	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	LTR_Ngaro	577896	578225	66	-	.	.
scaffold664	subtractBed	intrn	577636	577947	.	+	.	Parent=CGI_10021456;
	scaffold664	WUBlastX	LTR_Ngaro	577636	577947	70	-	.	.
scaffold664	subtractBed	intrn	585845	585951	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	585845	585951	117	+	.	.
scaffold664	subtractBed	intrn	587870	587954	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	587870	587954	161	+	.	.
scaffold664	subtractBed	intrn	590205	590246	.	+	.	Parent=CGI_10021456;
	scaffold664	TRF	Tandem_Repeat	590205	590246	68	+	.	.
scaffold664	subtractBed	intrn	654777	654822	.	+	.	Parent=CGI_10021458;
	scaffold664	TRF	Tandem_Repeat	654777	654822	65	+	.	.
scaffold664	subtractBed	intrn	649991	651130	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	LTR_Pao	649991	651130	1107	-	.	.
scaffold664	subtractBed	intrn	650761	652842	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	LTR_Pao	650761	652842	1367	+	.	.
scaffold664	subtractBed	intrn	648781	649170	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	LTR_Pao	648781	649170	289	+	.	.
scaffold664	subtractBed	intrn	649137	649508	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	LTR_Pao	649137	649508	190	+	.	.
scaffold664	subtractBed	intrn	656777	656941	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656777	656941	22	-	.	.
scaffold664	subtractBed	intrn	655927	656016	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	655927	656016	45	-	.	.
scaffold664	subtractBed	intrn	656069	656146	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656069	656146	58	-	.	.
scaffold664	subtractBed	intrn	656718	656783	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656718	656783	36	-	.	.
scaffold664	subtractBed	intrn	655994	656299	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	655994	656299	43	-	.	.
scaffold664	subtractBed	intrn	655994	656161	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	655994	656161	52	-	.	.
scaffold664	subtractBed	intrn	656884	657039	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656884	657039	64	-	.	.
scaffold664	subtractBed	intrn	656090	656176	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656090	656176	51	-	.	.
scaffold664	subtractBed	intrn	660282	660518	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	RC_Helitron	660282	660518	40	-	.	.
scaffold664	subtractBed	intrn	660584	660667	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	RC_Helitron	660584	660667	20	-	.	.
scaffold664	subtractBed	intrn	655894	656010	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	655894	656010	33	-	.	.
scaffold664	subtractBed	intrn	656703	656783	.	+	.	Parent=CGI_10021458;
	scaffold664	WUBlastX	DNA_TcMar-Marin	656703	656783	24	-	.	.
scaffold665	subtractBed	intrn	13847	13936	.	-	.	Parent=CGI_10008287;
	scaffold665	TRF	Tandem_Repeat	13847	13936	72	+	.	.
scaffold665	subtractBed	intrn	71860	72066	.	-	.	Parent=CGI_10008293;
	scaffold665	TRF	Tandem_Repeat	71860	72066	301	+	.	.
scaffold665	subtractBed	intrn	72494	72529	.	-	.	Parent=CGI_10008293;
	scaffold665	TRF	Tandem_Repeat	72494	72529	63	+	.	.
scaffold665	subtractBed	intrn	84813	85417	.	-	.	Parent=CGI_10008293;
	scaffold665	TRF	Tandem_Repeat	84813	85417	755	+	.	.
scaffold665	subtractBed	intrn	132964	133173	.	+	.	Parent=CGI_10008297;
	scaffold665	TRF	Tandem_Repeat	132964	133176	408	+	.	.
scaffold665	subtractBed	intrn	133693	133837	.	+	.	Parent=CGI_10008297;
	scaffold665	TRF	Tandem_Repeat	133693	133837	128	+	.	.
scaffold665	subtractBed	intrn	133797	133975	.	+	.	Parent=CGI_10008297;
	scaffold665	TRF	Tandem_Repeat	133797	133975	139	+	.	.
scaffold665	subtractBed	intrn	141413	141630	.	+	.	Parent=CGI_10008298;
	scaffold665	TRF	Tandem_Repeat	141413	141630	373	+	.	.
scaffold665	subtractBed	intrn	144131	144834	.	+	.	Parent=CGI_10008298;
	scaffold665	TRF	Tandem_Repeat	144131	144834	768	+	.	.
scaffold665	subtractBed	intrn	144952	144985	.	+	.	Parent=CGI_10008298;
	scaffold665	TRF	Tandem_Repeat	144952	144985	50	+	.	.
scaffold665	subtractBed	intrn	145245	146427	.	+	.	Parent=CGI_10008298;
	scaffold665	TRF	Tandem_Repeat	145245	146427	807	+	.	.
scaffold665	subtractBed	intrn	145245	146416	.	+	.	Parent=CGI_10008298;
	scaffold665	TRF	Tandem_Repeat	145245	146416	1275	+	.	.
scaffold665	subtractBed	intrn	189088	189168	.	+	.	Parent=CGI_10008302;
	scaffold665	TRF	Tandem_Repeat	189088	189168	162	+	.	.
scaffold665	subtractBed	intrn	197449	197550	.	+	.	Parent=CGI_10008303;
	scaffold665	TRF	Tandem_Repeat	197449	197550	168	+	.	.
scaffold667	subtractBed	intrn	18789	18845	.	-	.	Parent=CGI_10005354;
	scaffold667	TRF	Tandem_Repeat	18789	18845	87	+	.	.
scaffold667	subtractBed	intrn	21448	21476	.	-	.	Parent=CGI_10005354;
	scaffold667	TRF	Tandem_Repeat	21448	21476	58	+	.	.
scaffold667	subtractBed	intrn	18388	18624	.	-	.	Parent=CGI_10005354;
	scaffold667	WUBlastX	LINE_CR1-L2	18388	18624	54	+	.	.
scaffold667	subtractBed	intrn	18430	18693	.	-	.	Parent=CGI_10005354;
	scaffold667	WUBlastX	LINE_CR1-L2	18430	18693	100	+	.	.
scaffold667	subtractBed	intrn	18439	18756	.	-	.	Parent=CGI_10005354;
	scaffold667	WUBlastX	LINE_CR1	18439	18756	44	+	.	.
scaffold67	subtractBed	intrn	8473	8530	.	+	.	Parent=CGI_10018260;
	scaffold67	TRF	Tandem_Repeat	8473	8530	116	+	.	.
scaffold67	subtractBed	intrn	8550	8578	.	+	.	Parent=CGI_10018260;
	scaffold67	TRF	Tandem_Repeat	8550	8578	58	+	.	.
scaffold67	subtractBed	intrn	31242	31411	.	-	.	Parent=CGI_10018261;
	scaffold67	TRF	Tandem_Repeat	31242	31411	250	+	.	.
scaffold67	subtractBed	intrn	28493	28807	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	28493	28807	58	+	.	.
scaffold67	subtractBed	intrn	30892	30993	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	30892	30993	28	+	.	.
scaffold67	subtractBed	intrn	28846	29244	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	28846	29244	101	+	.	.
scaffold67	subtractBed	intrn	29223	29591	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	29223	29591	113	+	.	.
scaffold67	subtractBed	intrn	30674	30766	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	30674	30766	30	+	.	.
scaffold67	subtractBed	intrn	28442	28747	.	-	.	Parent=CGI_10018261;
	scaffold67	WUBlastX	DNA_hAT-Tip100	28442	28747	39	+	.	.
scaffold67	subtractBed	intrn	56170	56200	.	+	.	Parent=CGI_10018262;
	scaffold67	TRF	Tandem_Repeat	56170	56200	62	+	.	.
scaffold67	subtractBed	intrn	64435	64505	.	+	.	Parent=CGI_10018262;
	scaffold67	TRF	Tandem_Repeat	64435	64505	121	+	.	.
scaffold67	subtractBed	intrn	82412	83734	.	-	.	Parent=CGI_10018264;
	scaffold67	WUBlastX	DNA_TcMar-Tc2	82412	83734	1035	-	.	.
scaffold67	subtractBed	intrn	90147	90341	.	-	.	Parent=CGI_10018264;
	scaffold67	WUBlastX	DNA_IS4EU	90147	90341	40	-	.	.
scaffold67	subtractBed	intrn	90153	90482	.	-	.	Parent=CGI_10018264;
	scaffold67	WUBlastX	DNA_IS4EU	90153	90482	39	-	.	.
scaffold67	subtractBed	intrn	160612	160657	.	+	.	Parent=CGI_10018267;
	scaffold67	TRF	Tandem_Repeat	160612	160657	92	+	.	.
scaffold67	subtractBed	intrn	181028	181064	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	181028	181064	56	+	.	.
scaffold67	subtractBed	intrn	182484	183581	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	182484	183581	1955	+	.	.
scaffold67	subtractBed	intrn	184248	184541	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	184248	184541	293	+	.	.
scaffold67	subtractBed	intrn	184275	184669	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	184275	184669	170	+	.	.
scaffold67	subtractBed	intrn	184372	184482	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	184372	184482	70	+	.	.
scaffold67	subtractBed	intrn	184979	185079	.	+	.	Parent=CGI_10018268;
	scaffold67	TRF	Tandem_Repeat	184979	185079	80	+	.	.
scaffold67	subtractBed	intrn	253076	253551	.	-	.	Parent=CGI_10018269;
	scaffold67	TRF	Tandem_Repeat	253076	253551	288	+	.	.
scaffold67	subtractBed	intrn	267396	267420	.	-	.	Parent=CGI_10018269;
	scaffold67	TRF	Tandem_Repeat	267396	267420	50	+	.	.
scaffold67	subtractBed	intrn	267568	267665	.	-	.	Parent=CGI_10018269;
	scaffold67	TRF	Tandem_Repeat	267568	267665	133	+	.	.
scaffold67	subtractBed	intrn	267747	267790	.	-	.	Parent=CGI_10018269;
	scaffold67	TRF	Tandem_Repeat	267747	267790	88	+	.	.
scaffold67	subtractBed	intrn	324765	324821	.	+	.	Parent=CGI_10018272;
	scaffold67	TRF	Tandem_Repeat	324765	324821	114	+	.	.
scaffold67	subtractBed	intrn	335480	335524	.	+	.	Parent=CGI_10018272;
	scaffold67	TRF	Tandem_Repeat	335480	335524	63	+	.	.
scaffold67	subtractBed	intrn	338116	338250	.	+	.	Parent=CGI_10018272;
	scaffold67	TRF	Tandem_Repeat	338116	338250	72	+	.	.
scaffold67	subtractBed	intrn	337918	338251	.	+	.	Parent=CGI_10018272;
	scaffold67	TRF	Tandem_Repeat	337918	338251	424	+	.	.
scaffold67	subtractBed	intrn	340165	340424	.	+	.	Parent=CGI_10018272;
	scaffold67	TRF	Tandem_Repeat	340165	340424	425	+	.	.
scaffold67	subtractBed	intrn	397974	398025	.	+	.	Parent=CGI_10018273;
	scaffold67	TRF	Tandem_Repeat	397974	398025	104	+	.	.
scaffold67	subtractBed	intrn	398106	398288	.	+	.	Parent=CGI_10018273;
	scaffold67	WUBlastX	LTR_Gypsy	398106	398288	23	-	.	.
scaffold67	subtractBed	intrn	467623	467676	.	+	.	Parent=CGI_10018277;
	scaffold67	TRF	Tandem_Repeat	467623	467676	101	+	.	.
scaffold670	subtractBed	intrn	1029	1847	.	-	.	Parent=CGI_10007406;
	scaffold670	TRF	Tandem_Repeat	1029	1847	930	+	.	.
scaffold670	subtractBed	intrn	25489	26354	.	+	.	Parent=CGI_10007407;
	scaffold670	TRF	Tandem_Repeat	25479	26354	722	+	.	.
scaffold670	subtractBed	intrn	25489	26246	.	+	.	Parent=CGI_10007407;
	scaffold670	TRF	Tandem_Repeat	25482	26246	740	+	.	.
scaffold670	subtractBed	intrn	25536	26320	.	+	.	Parent=CGI_10007407;
	scaffold670	TRF	Tandem_Repeat	25536	26320	909	+	.	.
scaffold670	subtractBed	intrn	41988	42015	.	-	.	Parent=CGI_10007408;
	scaffold670	TRF	Tandem_Repeat	41988	42015	56	+	.	.
scaffold670	subtractBed	intrn	41988	42015	.	+	.	Parent=CGI_10007409;
	scaffold670	TRF	Tandem_Repeat	41988	42015	56	+	.	.
scaffold670	subtractBed	intrn	129513	129546	.	+	.	Parent=CGI_10007410;
	scaffold670	TRF	Tandem_Repeat	129513	129546	61	+	.	.
scaffold670	subtractBed	intrn	131774	131810	.	+	.	Parent=CGI_10007410;
	scaffold670	TRF	Tandem_Repeat	131774	131810	74	+	.	.
scaffold670	subtractBed	intrn	134285	134710	.	+	.	Parent=CGI_10007410;
	scaffold670	WUBlastX	LINE_CR1-L2	134285	134710	70	+	.	.
scaffold670	subtractBed	intrn	134387	134704	.	+	.	Parent=CGI_10007410;
	scaffold670	WUBlastX	LINE_CR1-L2	134387	134704	94	+	.	.
scaffold670	subtractBed	intrn	139982	140038	.	+	.	Parent=CGI_10007411;
	scaffold670	TRF	Tandem_Repeat	139982	140038	107	+	.	.
scaffold672	subtractBed	intrn	4840	4871	.	-	.	Parent=CGI_10021021;
	scaffold672	TRF	Tandem_Repeat	4840	4871	64	+	.	.
scaffold672	subtractBed	intrn	5936	6004	.	-	.	Parent=CGI_10021021;
	scaffold672	TRF	Tandem_Repeat	5936	6004	138	+	.	.
scaffold672	subtractBed	intrn	9257	9379	.	-	.	Parent=CGI_10021021;
	scaffold672	WUBlastX	DNA_IS4EU	9257	9379	36	+	.	.
scaffold672	subtractBed	intrn	10159	10386	.	-	.	Parent=CGI_10021021;
	scaffold672	WUBlastX	DNA_IS4EU	10159	10386	106	+	.	.
scaffold672	subtractBed	intrn	15243	15551	.	-	.	Parent=CGI_10021021;
	scaffold672	WUBlastX	LINE_RTE-BovB	15243	15551	189	+	.	.
scaffold672	subtractBed	intrn	15171	15458	.	-	.	Parent=CGI_10021021;
	scaffold672	WUBlastX	LINE_RTE-BovB	15171	15458	88	+	.	.
scaffold672	subtractBed	intrn	46309	46347	.	-	.	Parent=CGI_10021022;
	scaffold672	TRF	Tandem_Repeat	46309	46347	78	+	.	.
scaffold672	subtractBed	intrn	129733	130164	.	+	.	Parent=CGI_10021024;
	scaffold672	WUBlastX	LINE_RTE-BovB	129733	130164	48	+	.	.
scaffold672	subtractBed	intrn	130455	132092	.	+	.	Parent=CGI_10021024;
	scaffold672	WUBlastX	DNA_MuDR	130455	132092	665	+	.	.
scaffold672	subtractBed	intrn	186283	186324	.	+	.	Parent=CGI_10021027;
	scaffold672	TRF	Tandem_Repeat	186283	186324	84	+	.	.
scaffold672	subtractBed	intrn	186562	186619	.	+	.	Parent=CGI_10021027;
	scaffold672	TRF	Tandem_Repeat	186562	186619	100	+	.	.
scaffold672	subtractBed	intrn	186882	186924	.	+	.	Parent=CGI_10021027;
	scaffold672	TRF	Tandem_Repeat	186882	186924	86	+	.	.
scaffold672	subtractBed	intrn	192397	192687	.	+	.	Parent=CGI_10021027;
	scaffold672	WUBlastX	LINE_RTE-X	192397	192687	42	-	.	.
scaffold672	subtractBed	intrn	191752	192597	.	+	.	Parent=CGI_10021027;
	scaffold672	WUBlastX	LINE_RTE-X	191752	192597	547	-	.	.
scaffold672	subtractBed	intrn	191632	192630	.	+	.	Parent=CGI_10021027;
	scaffold672	WUBlastX	LINE_RTE-X	191632	192630	178	-	.	.
scaffold672	subtractBed	intrn	231758	231820	.	-	.	Parent=CGI_10021030;
	scaffold672	TRF	Tandem_Repeat	231758	231820	94	+	.	.
scaffold672	subtractBed	intrn	286238	286328	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	286238	286328	96	+	.	.
scaffold672	subtractBed	intrn	290024	291416	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	290024	291416	1555	+	.	.
scaffold672	subtractBed	intrn	296168	296382	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	296168	296382	292	+	.	.
scaffold672	subtractBed	intrn	296168	297217	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	296168	297217	840	+	.	.
scaffold672	subtractBed	intrn	296168	297224	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	296168	297224	872	+	.	.
scaffold672	subtractBed	intrn	296377	296936	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	296377	296936	652	+	.	.
scaffold672	subtractBed	intrn	297078	297224	.	-	.	Parent=CGI_10021033;
	scaffold672	TRF	Tandem_Repeat	297078	297224	213	+	.	.
scaffold672	subtractBed	intrn	336328	336990	.	+	.	Parent=CGI_10021036;
	scaffold672	TRF	Tandem_Repeat	336328	336990	1155	+	.	.
scaffold672	subtractBed	intrn	345387	345432	.	+	.	Parent=CGI_10021037;
	scaffold672	TRF	Tandem_Repeat	345387	345432	83	+	.	.
scaffold672	subtractBed	intrn	345918	345954	.	+	.	Parent=CGI_10021037;
	scaffold672	TRF	Tandem_Repeat	345918	345954	65	+	.	.
scaffold672	subtractBed	intrn	451861	451899	.	-	.	Parent=CGI_10021044;
	scaffold672	TRF	Tandem_Repeat	451861	451899	78	+	.	.
scaffold672	subtractBed	intrn	478594	478662	.	-	.	Parent=CGI_10021046;
	scaffold672	TRF	Tandem_Repeat	478594	478662	120	+	.	.
scaffold672	subtractBed	intrn	537465	537499	.	+	.	Parent=CGI_10021050;
	scaffold672	TRF	Tandem_Repeat	537465	537499	70	+	.	.
scaffold672	subtractBed	intrn	575034	575137	.	-	.	Parent=CGI_10021053;
	scaffold672	TRF	Tandem_Repeat	575034	575137	86	+	.	.
scaffold672	subtractBed	intrn	587428	587473	.	-	.	Parent=CGI_10021053;
	scaffold672	TRF	Tandem_Repeat	587428	587473	51	+	.	.
scaffold674	subtractBed	intrn	14475	15158	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	14475	15158	206	+	.	.
scaffold674	subtractBed	intrn	12166	12651	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	12166	12651	170	+	.	.
scaffold674	subtractBed	intrn	12937	14466	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	12937	14466	678	+	.	.
scaffold674	subtractBed	intrn	12178	12813	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	12178	12813	69	+	.	.
scaffold674	subtractBed	intrn	12160	12567	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	12160	12567	182	+	.	.
scaffold674	subtractBed	intrn	15145	15366	.	+	.	Parent=CGI_10002488;
	scaffold674	WUBlastX	LTR_Ngaro	15145	15366	120	+	.	.
scaffold675	subtractBed	intrn	6673	6716	.	+	.	Parent=CGI_10017852;
	scaffold675	TRF	Tandem_Repeat	6673	6716	54	+	.	.
scaffold675	subtractBed	intrn	8971	9007	.	+	.	Parent=CGI_10017852;
	scaffold675	TRF	Tandem_Repeat	8971	9007	74	+	.	.
scaffold675	subtractBed	intrn	38272	38379	.	+	.	Parent=CGI_10017853;
	scaffold675	TRF	Tandem_Repeat	38272	38379	216	+	.	.
scaffold675	subtractBed	intrn	110863	111496	.	-	.	Parent=CGI_10017856;
	scaffold675	TRF	Tandem_Repeat	110863	111496	416	+	.	.
scaffold675	subtractBed	intrn	111117	111753	.	-	.	Parent=CGI_10017856;
	scaffold675	TRF	Tandem_Repeat	111117	111753	829	+	.	.
scaffold675	subtractBed	intrn	111117	111753	.	-	.	Parent=CGI_10017856;
	scaffold675	TRF	Tandem_Repeat	111117	111753	804	+	.	.
scaffold675	subtractBed	intrn	110914	111753	.	-	.	Parent=CGI_10017856;
	scaffold675	TRF	Tandem_Repeat	110914	111753	757	+	.	.
scaffold675	subtractBed	intrn	115809	115958	.	-	.	Parent=CGI_10017856;
	scaffold675	WUBlastX	DNA_TcMar-Marin	115809	115958	42	-	.	.
scaffold675	subtractBed	intrn	115406	115804	.	-	.	Parent=CGI_10017856;
	scaffold675	WUBlastX	DNA_TcMar-Marin	115406	115804	80	-	.	.
scaffold675	subtractBed	intrn	115319	115567	.	-	.	Parent=CGI_10017856;
	scaffold675	WUBlastX	DNA_TcMar-Marin	115319	115567	62	-	.	.
scaffold675	subtractBed	intrn	115942	116193	.	-	.	Parent=CGI_10017856;
	scaffold675	WUBlastX	DNA_TcMar-Marin	115942	116193	46	-	.	.
scaffold675	subtractBed	intrn	129373	129405	.	+	.	Parent=CGI_10017857;
	scaffold675	TRF	Tandem_Repeat	129373	129405	66	+	.	.
scaffold675	subtractBed	intrn	132542	132583	.	+	.	Parent=CGI_10017857;
	scaffold675	TRF	Tandem_Repeat	132542	132583	50	+	.	.
scaffold675	subtractBed	intrn	134553	136260	.	+	.	Parent=CGI_10017857;
	scaffold675	TRF	Tandem_Repeat	134553	136260	2200	+	.	.
scaffold675	subtractBed	intrn	134553	136278	.	+	.	Parent=CGI_10017857;
	scaffold675	TRF	Tandem_Repeat	134553	136278	2296	+	.	.
scaffold675	subtractBed	intrn	171247	171285	.	+	.	Parent=CGI_10017860;
	scaffold675	TRF	Tandem_Repeat	171247	171285	51	+	.	.
scaffold675	subtractBed	intrn	192850	193103	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	192850	193103	395	+	.	.
scaffold675	subtractBed	intrn	193831	194443	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	193831	194443	593	+	.	.
scaffold675	subtractBed	intrn	193827	194411	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	193827	194411	369	+	.	.
scaffold675	subtractBed	intrn	193853	194443	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	193853	194443	143	+	.	.
scaffold675	subtractBed	intrn	193829	193979	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	193829	193979	90	+	.	.
scaffold675	subtractBed	intrn	193934	194294	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	193934	194294	252	+	.	.
scaffold675	subtractBed	intrn	194317	194436	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	194317	194436	83	+	.	.
scaffold675	subtractBed	intrn	197027	197370	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	197027	197370	431	+	.	.
scaffold675	subtractBed	intrn	198408	198702	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	198384	198702	251	+	.	.
scaffold675	subtractBed	intrn	198408	198712	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	198384	198712	380	+	.	.
scaffold675	subtractBed	intrn	202195	202254	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	202195	202254	120	+	.	.
scaffold675	subtractBed	intrn	203097	203713	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	203097	203713	787	+	.	.
scaffold675	subtractBed	intrn	208043	208228	.	+	.	Parent=CGI_10017861;
	scaffold675	TRF	Tandem_Repeat	208043	208228	342	+	.	.
scaffold675	subtractBed	intrn	217610	218083	.	+	.	Parent=CGI_10017862;
	scaffold675	TRF	Tandem_Repeat	217610	218083	208	+	.	.
scaffold675	subtractBed	intrn	218297	218474	.	+	.	Parent=CGI_10017862;
	scaffold675	TRF	Tandem_Repeat	218297	218474	284	+	.	.
scaffold675	subtractBed	intrn	219899	219978	.	+	.	Parent=CGI_10017862;
	scaffold675	TRF	Tandem_Repeat	219899	219978	82	+	.	.
scaffold675	subtractBed	intrn	219863	219978	.	+	.	Parent=CGI_10017862;
	scaffold675	TRF	Tandem_Repeat	219863	219978	118	+	.	.
scaffold675	subtractBed	intrn	219863	219969	.	+	.	Parent=CGI_10017862;
	scaffold675	TRF	Tandem_Repeat	219863	219969	105	+	.	.
scaffold675	subtractBed	intrn	261367	262721	.	+	.	Parent=CGI_10017864;
	scaffold675	TRF	Tandem_Repeat	261367	262721	2112	+	.	.
scaffold675	subtractBed	intrn	267527	270020	.	+	.	Parent=CGI_10017864;
	scaffold675	TRF	Tandem_Repeat	267527	270020	3308	+	.	.
scaffold675	subtractBed	intrn	306131	306169	.	-	.	Parent=CGI_10017866;
	scaffold675	TRF	Tandem_Repeat	306131	306169	78	+	.	.
scaffold675	subtractBed	intrn	320938	320968	.	+	.	Parent=CGI_10017868;
	scaffold675	TRF	Tandem_Repeat	320938	320968	62	+	.	.
scaffold675	subtractBed	intrn	338332	338424	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	338332	338424	168	+	.	.
scaffold675	subtractBed	intrn	338446	338484	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	338446	338484	78	+	.	.
scaffold675	subtractBed	intrn	339445	340249	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	339441	340249	498	+	.	.
scaffold675	subtractBed	intrn	339516	340244	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	339516	340244	648	+	.	.
scaffold675	subtractBed	intrn	339514	340244	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	339514	340244	812	+	.	.
scaffold675	subtractBed	intrn	351609	351658	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	351609	351658	64	+	.	.
scaffold675	subtractBed	intrn	351604	351651	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	351604	351651	78	+	.	.
scaffold675	subtractBed	intrn	351682	352642	.	+	.	Parent=CGI_10017869;
	scaffold675	TRF	Tandem_Repeat	351682	352642	1439	+	.	.
scaffold675	subtractBed	intrn	371751	371866	.	-	.	Parent=CGI_10017871;
	scaffold675	TRF	Tandem_Repeat	371751	371866	130	+	.	.
scaffold675	subtractBed	intrn	371751	371866	.	-	.	Parent=CGI_10017871;
	scaffold675	TRF	Tandem_Repeat	371751	371866	171	+	.	.
scaffold675	subtractBed	intrn	378118	378153	.	-	.	Parent=CGI_10017871;
	scaffold675	TRF	Tandem_Repeat	378118	378153	72	+	.	.
scaffold675	subtractBed	intrn	379062	379377	.	-	.	Parent=CGI_10017871;
	scaffold675	TRF	Tandem_Repeat	379062	379377	362	+	.	.
scaffold675	subtractBed	intrn	465806	465854	.	-	.	Parent=CGI_10017873;
	scaffold675	TRF	Tandem_Repeat	465806	465854	98	+	.	.
scaffold675	subtractBed	intrn	486595	486672	.	-	.	Parent=CGI_10017873;
	scaffold675	TRF	Tandem_Repeat	486595	486672	147	+	.	.
scaffold675	subtractBed	intrn	508709	508745	.	-	.	Parent=CGI_10017875;
	scaffold675	TRF	Tandem_Repeat	508709	508745	67	+	.	.
scaffold676	subtractBed	intrn	45020	46176	.	+	.	Parent=CGI_10021414;
	scaffold676	TRF	Tandem_Repeat	45020	46176	940	+	.	.
scaffold676	subtractBed	intrn	46692	46737	.	+	.	Parent=CGI_10021414;
	scaffold676	TRF	Tandem_Repeat	46692	46737	92	+	.	.
scaffold676	subtractBed	intrn	121113	121183	.	+	.	Parent=CGI_10021417;
	scaffold676	TRF	Tandem_Repeat	121113	121183	142	+	.	.
scaffold676	subtractBed	intrn	132319	132363	.	-	.	Parent=CGI_10021418;
	scaffold676	TRF	Tandem_Repeat	132319	132363	74	+	.	.
scaffold676	subtractBed	intrn	132317	132367	.	-	.	Parent=CGI_10021418;
	scaffold676	TRF	Tandem_Repeat	132317	132367	81	+	.	.
scaffold676	subtractBed	intrn	139318	139403	.	-	.	Parent=CGI_10021418;
	scaffold676	TRF	Tandem_Repeat	139318	139403	172	+	.	.
scaffold676	subtractBed	intrn	158315	159325	.	-	.	Parent=CGI_10021419;
	scaffold676	TRF	Tandem_Repeat	158315	159325	1473	+	.	.
scaffold676	subtractBed	intrn	164884	164941	.	-	.	Parent=CGI_10021419;
	scaffold676	TRF	Tandem_Repeat	164884	164941	100	+	.	.
scaffold676	subtractBed	intrn	169656	169699	.	-	.	Parent=CGI_10021419;
	scaffold676	TRF	Tandem_Repeat	169656	169699	88	+	.	.
scaffold676	subtractBed	intrn	171084	171129	.	-	.	Parent=CGI_10021419;
	scaffold676	TRF	Tandem_Repeat	171084	171129	92	+	.	.
scaffold676	subtractBed	intrn	176631	176671	.	-	.	Parent=CGI_10021420;
	scaffold676	TRF	Tandem_Repeat	176631	176671	73	+	.	.
scaffold676	subtractBed	intrn	177769	177820	.	-	.	Parent=CGI_10021420;
	scaffold676	TRF	Tandem_Repeat	177769	177820	104	+	.	.
scaffold676	subtractBed	intrn	253846	253891	.	+	.	Parent=CGI_10021424;
	scaffold676	TRF	Tandem_Repeat	253846	253891	92	+	.	.
scaffold676	subtractBed	intrn	427684	427742	.	+	.	Parent=CGI_10021426;
	scaffold676	WUBlastX	RC_Helitron	427392	427742	56	+	.	.
scaffold676	subtractBed	intrn	451088	451147	.	-	.	Parent=CGI_10021428;
	scaffold676	TRF	Tandem_Repeat	451088	451147	78	+	.	.
scaffold676	subtractBed	intrn	490867	491106	.	+	.	Parent=CGI_10021429;
	scaffold676	TRF	Tandem_Repeat	490867	491106	257	+	.	.
scaffold676	subtractBed	intrn	560282	560385	.	+	.	Parent=CGI_10021432;
	scaffold676	TRF	Tandem_Repeat	560282	560385	199	+	.	.
scaffold676	subtractBed	intrn	568457	568719	.	+	.	Parent=CGI_10021432;
	scaffold676	TRF	Tandem_Repeat	568457	568719	229	+	.	.
scaffold676	subtractBed	intrn	576812	577003	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-BovB	576812	577003	91	-	.	.
scaffold676	subtractBed	intrn	577030	577305	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	577030	577305	148	-	.	.
scaffold676	subtractBed	intrn	576298	576459	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576298	576459	64	-	.	.
scaffold676	subtractBed	intrn	576298	576432	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576298	576432	69	-	.	.
scaffold676	subtractBed	intrn	576644	576913	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576644	576913	28	-	.	.
scaffold676	subtractBed	intrn	576220	576435	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576220	576435	38	-	.	.
scaffold676	subtractBed	intrn	576773	577015	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576773	577015	75	-	.	.
scaffold676	subtractBed	intrn	576707	577021	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576707	577021	66	-	.	.
scaffold676	subtractBed	intrn	576166	576435	.	+	.	Parent=CGI_10021432;
	scaffold676	WUBlastX	LINE_RTE-X	576166	576435	38	-	.	.
scaffold676	subtractBed	intrn	591714	591806	.	+	.	Parent=CGI_10021432;
	scaffold676	TRF	Tandem_Repeat	591714	591806	105	+	.	.
scaffold676	subtractBed	intrn	594361	594452	.	+	.	Parent=CGI_10021432;
	scaffold676	TRF	Tandem_Repeat	594361	594452	58	+	.	.
scaffold676	subtractBed	intrn	594357	594449	.	+	.	Parent=CGI_10021432;
	scaffold676	TRF	Tandem_Repeat	594357	594449	80	+	.	.
scaffold678	subtractBed	intrn	17311	17370	.	+	.	Parent=CGI_10026329;
	scaffold678	TRF	Tandem_Repeat	17311	17370	57	+	.	.
scaffold678	subtractBed	intrn	23352	23389	.	+	.	Parent=CGI_10026329;
	scaffold678	TRF	Tandem_Repeat	23352	23389	62	+	.	.
scaffold678	subtractBed	intrn	27931	27993	.	+	.	Parent=CGI_10026329;
	scaffold678	TRF	Tandem_Repeat	27931	27993	126	+	.	.
scaffold678	subtractBed	intrn	34654	34686	.	+	.	Parent=CGI_10026329;
	scaffold678	TRF	Tandem_Repeat	34654	34686	66	+	.	.
scaffold678	subtractBed	intrn	43560	43595	.	+	.	Parent=CGI_10026329;
	scaffold678	TRF	Tandem_Repeat	43560	43595	63	+	.	.
scaffold678	subtractBed	intrn	89375	89536	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	89375	89536	28	-	.	.
scaffold678	subtractBed	intrn	88977	89324	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	88977	89324	23	-	.	.
scaffold678	subtractBed	intrn	89803	89943	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	89803	89943	41	-	.	.
scaffold678	subtractBed	intrn	89942	90610	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	89942	90610	41	-	.	.
scaffold678	subtractBed	intrn	89625	89816	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	89625	89816	33	-	.	.
scaffold678	subtractBed	intrn	89655	89864	.	+	.	Parent=CGI_10026333;
	scaffold678	WUBlastX	LTR_Ngaro	89655	89864	47	-	.	.
scaffold678	subtractBed	intrn	135761	136234	.	+	.	Parent=CGI_10026336;
	scaffold678	WUBlastX	LTR_Copia	135761	136234	233	+	.	.
scaffold678	subtractBed	intrn	177647	177982	.	+	.	Parent=CGI_10026338;
	scaffold678	TRF	Tandem_Repeat	177647	177982	378	+	.	.
scaffold678	subtractBed	intrn	205860	205903	.	+	.	Parent=CGI_10026340;
	scaffold678	TRF	Tandem_Repeat	205860	205903	70	+	.	.
scaffold678	subtractBed	intrn	205934	207060	.	+	.	Parent=CGI_10026340;
	scaffold678	TRF	Tandem_Repeat	205934	207060	1602	+	.	.
scaffold678	subtractBed	intrn	218075	218106	.	-	.	Parent=CGI_10026343;
	scaffold678	TRF	Tandem_Repeat	218075	218106	64	+	.	.
scaffold678	subtractBed	intrn	219690	219743	.	-	.	Parent=CGI_10026343;
	scaffold678	TRF	Tandem_Repeat	219690	219743	108	+	.	.
scaffold678	subtractBed	intrn	221073	221125	.	-	.	Parent=CGI_10026343;
	scaffold678	TRF	Tandem_Repeat	221073	221125	106	+	.	.
scaffold678	subtractBed	intrn	225118	225375	.	-	.	Parent=CGI_10026343;
	scaffold678	WUBlastX	LINE_RTE-X	225118	225375	55	-	.	.
scaffold678	subtractBed	intrn	225118	225426	.	-	.	Parent=CGI_10026343;
	scaffold678	WUBlastX	LINE_RTE-X	225118	225426	51	-	.	.
scaffold678	subtractBed	intrn	229761	229806	.	-	.	Parent=CGI_10026343;
	scaffold678	TRF	Tandem_Repeat	229761	229806	92	+	.	.
scaffold678	subtractBed	intrn	229806	229832	.	-	.	Parent=CGI_10026343;
	scaffold678	TRF	Tandem_Repeat	229806	229832	54	+	.	.
scaffold678	subtractBed	intrn	290539	290586	.	-	.	Parent=CGI_10026346;
	scaffold678	TRF	Tandem_Repeat	290539	290586	87	+	.	.
scaffold678	subtractBed	intrn	346892	346985	.	-	.	Parent=CGI_10026353;
	scaffold678	TRF	Tandem_Repeat	346892	346985	74	+	.	.
scaffold678	subtractBed	intrn	347125	347215	.	-	.	Parent=CGI_10026353;
	scaffold678	TRF	Tandem_Repeat	347125	347215	77	+	.	.
scaffold678	subtractBed	intrn	397479	397922	.	+	.	Parent=CGI_10026356;
	scaffold678	TRF	Tandem_Repeat	397456	397922	702	+	.	.
scaffold678	subtractBed	intrn	397921	398929	.	+	.	Parent=CGI_10026356;
	scaffold678	TRF	Tandem_Repeat	397921	398929	1462	+	.	.
scaffold678	subtractBed	intrn	402414	403307	.	+	.	Parent=CGI_10026356;
	scaffold678	TRF	Tandem_Repeat	402404	403307	962	+	.	.
scaffold678	subtractBed	intrn	402439	403265	.	+	.	Parent=CGI_10026356;
	scaffold678	TRF	Tandem_Repeat	402439	403265	815	+	.	.
scaffold678	subtractBed	intrn	403213	403476	.	+	.	Parent=CGI_10026356;
	scaffold678	TRF	Tandem_Repeat	403213	403476	271	+	.	.
scaffold678	subtractBed	intrn	411084	411204	.	-	.	Parent=CGI_10026357;
	scaffold678	TRF	Tandem_Repeat	411084	411215	221	+	.	.
scaffold678	subtractBed	intrn	411712	412136	.	-	.	Parent=CGI_10026357;
	scaffold678	TRF	Tandem_Repeat	411712	412136	338	+	.	.
scaffold678	subtractBed	intrn	411712	412136	.	+	.	Parent=CGI_10026358;
	scaffold678	TRF	Tandem_Repeat	411712	412136	338	+	.	.
scaffold678	subtractBed	intrn	423640	423711	.	+	.	Parent=CGI_10026358;
	scaffold678	TRF	Tandem_Repeat	423640	423711	144	+	.	.
scaffold678	subtractBed	intrn	427443	427506	.	+	.	Parent=CGI_10026358;
	scaffold678	TRF	Tandem_Repeat	427443	427506	119	+	.	.
scaffold678	subtractBed	intrn	427443	427506	.	-	.	Parent=CGI_10026359;
	scaffold678	TRF	Tandem_Repeat	427443	427506	119	+	.	.
scaffold678	subtractBed	intrn	454637	454796	.	-	.	Parent=CGI_10026361;
	scaffold678	TRF	Tandem_Repeat	454637	454823	266	+	.	.
scaffold678	subtractBed	intrn	456991	457054	.	-	.	Parent=CGI_10026361;
	scaffold678	TRF	Tandem_Repeat	456991	457054	128	+	.	.
scaffold678	subtractBed	intrn	463100	463208	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	463100	463208	157	+	.	.
scaffold678	subtractBed	intrn	463381	463652	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	463381	463652	372	+	.	.
scaffold678	subtractBed	intrn	467030	467187	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	467030	467187	262	+	.	.
scaffold678	subtractBed	intrn	467440	467492	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	467440	467492	106	+	.	.
scaffold678	subtractBed	intrn	467797	468391	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	467797	468391	1021	+	.	.
scaffold678	subtractBed	intrn	468857	468943	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	468857	468943	122	+	.	.
scaffold678	subtractBed	intrn	469033	469207	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	469033	469207	158	+	.	.
scaffold678	subtractBed	intrn	469019	469207	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	469019	469207	87	+	.	.
scaffold678	subtractBed	intrn	469206	469371	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	469206	469371	170	+	.	.
scaffold678	subtractBed	intrn	469449	469534	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	469449	469534	82	+	.	.
scaffold678	subtractBed	intrn	470091	470119	.	+	.	Parent=CGI_10026362;
	scaffold678	TRF	Tandem_Repeat	470091	470119	58	+	.	.
scaffold678	subtractBed	intrn	527609	527656	.	-	.	Parent=CGI_10026365;
	scaffold678	TRF	Tandem_Repeat	527609	527656	96	+	.	.
scaffold678	subtractBed	intrn	535373	536146	.	+	.	Parent=CGI_10026366;
	scaffold678	TRF	Tandem_Repeat	535373	536146	641	+	.	.
scaffold678	subtractBed	intrn	539544	539663	.	+	.	Parent=CGI_10026366;
	scaffold678	TRF	Tandem_Repeat	539544	539663	120	+	.	.
scaffold678	subtractBed	intrn	540623	541032	.	+	.	Parent=CGI_10026366;
	scaffold678	TRF	Tandem_Repeat	540623	541032	454	+	.	.
scaffold678	subtractBed	intrn	549887	550311	.	+	.	Parent=CGI_10026366;
	scaffold678	TRF	Tandem_Repeat	549887	550311	561	+	.	.
scaffold678	subtractBed	intrn	637625	637822	.	-	.	Parent=CGI_10026369;
	scaffold678	WUBlastX	LINE_L2	637625	637822	31	-	.	.
scaffold678	subtractBed	intrn	642629	642663	.	-	.	Parent=CGI_10026369;
	scaffold678	TRF	Tandem_Repeat	642629	642663	61	+	.	.
scaffold678	subtractBed	intrn	646799	646844	.	-	.	Parent=CGI_10026369;
	scaffold678	TRF	Tandem_Repeat	646799	646844	92	+	.	.
scaffold678	subtractBed	intrn	649315	649349	.	-	.	Parent=CGI_10026369;
	scaffold678	TRF	Tandem_Repeat	649315	649349	70	+	.	.
scaffold678	subtractBed	intrn	647458	647925	.	-	.	Parent=CGI_10026369;
	scaffold678	WUBlastX	LINE_L2	647458	647925	129	+	.	.
scaffold678	subtractBed	intrn	647572	647910	.	-	.	Parent=CGI_10026369;
	scaffold678	WUBlastX	LINE_L2	647572	647910	168	+	.	.
scaffold678	subtractBed	intrn	647254	647907	.	-	.	Parent=CGI_10026369;
	scaffold678	WUBlastX	LINE_L2	647254	647907	46	+	.	.
scaffold678	subtractBed	intrn	647894	649093	.	-	.	Parent=CGI_10026369;
	scaffold678	WUBlastX	LINE_L2	647894	649093	814	+	.	.
scaffold678	subtractBed	intrn	656685	656718	.	-	.	Parent=CGI_10026369;
	scaffold678	TRF	Tandem_Repeat	656685	656718	68	+	.	.
scaffold678	subtractBed	intrn	703390	703446	.	+	.	Parent=CGI_10026373;
	scaffold678	TRF	Tandem_Repeat	703390	703446	114	+	.	.
scaffold678	subtractBed	intrn	703940	703998	.	+	.	Parent=CGI_10026373;
	scaffold678	TRF	Tandem_Repeat	703940	703998	118	+	.	.
scaffold678	subtractBed	intrn	714104	714164	.	-	.	Parent=CGI_10026374;
	scaffold678	TRF	Tandem_Repeat	714104	714164	70	+	.	.
scaffold678	subtractBed	intrn	714103	714164	.	-	.	Parent=CGI_10026374;
	scaffold678	TRF	Tandem_Repeat	714103	714164	63	+	.	.
scaffold678	subtractBed	intrn	714334	715343	.	-	.	Parent=CGI_10026374;
	scaffold678	TRF	Tandem_Repeat	714334	715343	1388	+	.	.
scaffold678	subtractBed	intrn	720730	720796	.	-	.	Parent=CGI_10026375;
	scaffold678	WUBlastX	LINE_L1-Tx1	720730	721038	20	-	.	.
scaffold678	subtractBed	intrn	720835	721038	.	-	.	Parent=CGI_10026375;
	scaffold678	WUBlastX	LINE_L1-Tx1	720730	721038	20	-	.	.
scaffold678	subtractBed	intrn	726081	726113	.	-	.	Parent=CGI_10026375;
	scaffold678	TRF	Tandem_Repeat	726081	726113	66	+	.	.
scaffold678	subtractBed	intrn	727569	727640	.	-	.	Parent=CGI_10026375;
	scaffold678	TRF	Tandem_Repeat	727569	727640	72	+	.	.
scaffold678	subtractBed	intrn	747618	747651	.	-	.	Parent=CGI_10026377;
	scaffold678	TRF	Tandem_Repeat	747618	747651	59	+	.	.
scaffold678	subtractBed	intrn	747651	747677	.	-	.	Parent=CGI_10026377;
	scaffold678	TRF	Tandem_Repeat	747651	747677	54	+	.	.
scaffold678	subtractBed	intrn	747022	747135	.	-	.	Parent=CGI_10026377;
	scaffold678	WUBlastX	DNA_Harbinger	747022	747135	53	-	.	.
scaffold678	subtractBed	intrn	746555	746917	.	-	.	Parent=CGI_10026377;
	scaffold678	WUBlastX	DNA_Harbinger	746555	746917	274	-	.	.
scaffold678	subtractBed	intrn	747761	747919	.	-	.	Parent=CGI_10026377;
	scaffold678	WUBlastX	DNA_Harbinger	747761	747919	111	-	.	.
scaffold678	subtractBed	intrn	748742	749143	.	-	.	Parent=CGI_10026377;
	scaffold678	WUBlastX	DNA_Harbinger	748742	749143	77	-	.	.
scaffold678	subtractBed	intrn	747618	747651	.	+	.	Parent=CGI_10026378;
	scaffold678	TRF	Tandem_Repeat	747618	747651	59	+	.	.
scaffold678	subtractBed	intrn	747651	747677	.	+	.	Parent=CGI_10026378;
	scaffold678	TRF	Tandem_Repeat	747651	747677	54	+	.	.
scaffold678	subtractBed	intrn	747022	747135	.	+	.	Parent=CGI_10026378;
	scaffold678	WUBlastX	DNA_Harbinger	747022	747135	53	-	.	.
scaffold678	subtractBed	intrn	746555	746917	.	+	.	Parent=CGI_10026378;
	scaffold678	WUBlastX	DNA_Harbinger	746555	746917	274	-	.	.
scaffold678	subtractBed	intrn	747761	747919	.	+	.	Parent=CGI_10026378;
	scaffold678	WUBlastX	DNA_Harbinger	747761	747919	111	-	.	.
scaffold678	subtractBed	intrn	748742	749143	.	+	.	Parent=CGI_10026378;
	scaffold678	WUBlastX	DNA_Harbinger	748742	749143	77	-	.	.
scaffold678	subtractBed	intrn	770181	770208	.	-	.	Parent=CGI_10026380;
	scaffold678	TRF	Tandem_Repeat	770181	770208	56	+	.	.
scaffold678	subtractBed	intrn	805751	805782	.	+	.	Parent=CGI_10026382;
	scaffold678	TRF	Tandem_Repeat	805751	805782	64	+	.	.
scaffold678	subtractBed	intrn	805782	805823	.	+	.	Parent=CGI_10026382;
	scaffold678	TRF	Tandem_Repeat	805782	805823	84	+	.	.
scaffold678	subtractBed	intrn	815428	815622	.	+	.	Parent=CGI_10026382;
	scaffold678	WUBlastX	LTR_Gypsy	815428	815622	25	+	.	.
scaffold678	subtractBed	intrn	815672	815842	.	+	.	Parent=CGI_10026382;
	scaffold678	WUBlastX	LTR_Gypsy	815672	815842	114	+	.	.
scaffold678	subtractBed	intrn	815654	815860	.	+	.	Parent=CGI_10026382;
	scaffold678	WUBlastX	LTR_Gypsy	815654	815860	67	+	.	.
scaffold678	subtractBed	intrn	825923	826034	.	+	.	Parent=CGI_10026382;
	scaffold678	TRF	Tandem_Repeat	825923	826034	93	+	.	.
scaffold678	subtractBed	intrn	826985	827338	.	+	.	Parent=CGI_10026382;
	scaffold678	TRF	Tandem_Repeat	826985	827338	234	+	.	.
scaffold678	subtractBed	intrn	852568	853025	.	+	.	Parent=CGI_10026383;
	scaffold678	TRF	Tandem_Repeat	852568	853025	475	+	.	.
scaffold678	subtractBed	intrn	852572	853034	.	+	.	Parent=CGI_10026383;
	scaffold678	TRF	Tandem_Repeat	852572	853034	366	+	.	.
scaffold678	subtractBed	intrn	852568	853034	.	+	.	Parent=CGI_10026383;
	scaffold678	TRF	Tandem_Repeat	852568	853034	424	+	.	.
scaffold678	subtractBed	intrn	852568	853025	.	+	.	Parent=CGI_10026383;
	scaffold678	TRF	Tandem_Repeat	852568	853025	506	+	.	.
scaffold678	subtractBed	intrn	874423	874811	.	-	.	Parent=CGI_10026385;
	scaffold678	TRF	Tandem_Repeat	874423	874811	646	+	.	.
scaffold678	subtractBed	intrn	877372	877811	.	-	.	Parent=CGI_10026385;
	scaffold678	TRF	Tandem_Repeat	877334	877811	875	+	.	.
scaffold678	subtractBed	intrn	883720	884232	.	+	.	Parent=CGI_10026386;
	scaffold678	TRF	Tandem_Repeat	883720	884232	812	+	.	.
scaffold678	subtractBed	intrn	883724	884232	.	+	.	Parent=CGI_10026386;
	scaffold678	TRF	Tandem_Repeat	883724	884232	803	+	.	.
scaffold678	subtractBed	intrn	885068	885373	.	+	.	Parent=CGI_10026386;
	scaffold678	TRF	Tandem_Repeat	885068	885386	460	+	.	.
scaffold678	subtractBed	intrn	885992	887173	.	+	.	Parent=CGI_10026386;
	scaffold678	TRF	Tandem_Repeat	885984	887173	1624	+	.	.
scaffold678	subtractBed	intrn	931546	932066	.	-	.	Parent=CGI_10026389;
	scaffold678	TRF	Tandem_Repeat	931546	932066	652	+	.	.
scaffold678	subtractBed	intrn	933892	934061	.	-	.	Parent=CGI_10026389;
	scaffold678	TRF	Tandem_Repeat	933892	934061	236	+	.	.
scaffold678	subtractBed	intrn	1030470	1031600	.	-	.	Parent=CGI_10026392;
	scaffold678	TRF	Tandem_Repeat	1030470	1031600	1429	+	.	.
scaffold678	subtractBed	intrn	1032109	1032448	.	-	.	Parent=CGI_10026392;
	scaffold678	TRF	Tandem_Repeat	1032109	1032448	477	+	.	.
scaffold678	subtractBed	intrn	1030470	1031600	.	+	.	Parent=CGI_10026393;
	scaffold678	TRF	Tandem_Repeat	1030470	1031600	1429	+	.	.
scaffold678	subtractBed	intrn	1032109	1032448	.	+	.	Parent=CGI_10026393;
	scaffold678	TRF	Tandem_Repeat	1032109	1032448	477	+	.	.
scaffold678	subtractBed	intrn	1067664	1067879	.	+	.	Parent=CGI_10026395;
	scaffold678	TRF	Tandem_Repeat	1067664	1067879	360	+	.	.
scaffold678	subtractBed	intrn	1092083	1092108	.	-	.	Parent=CGI_10026396;
	scaffold678	TRF	Tandem_Repeat	1092083	1092108	52	+	.	.
scaffold678	subtractBed	intrn	1146494	1147531	.	-	.	Parent=CGI_10026400;
	scaffold678	TRF	Tandem_Repeat	1146494	1147531	1545	+	.	.
scaffold678	subtractBed	intrn	1146490	1147531	.	-	.	Parent=CGI_10026400;
	scaffold678	TRF	Tandem_Repeat	1146490	1147531	1616	+	.	.
scaffold678	subtractBed	intrn	1149584	1150518	.	-	.	Parent=CGI_10026400;
	scaffold678	TRF	Tandem_Repeat	1149584	1150518	1228	+	.	.
scaffold680	subtractBed	intrn	35756	35791	.	-	.	Parent=CGI_10003337;
	scaffold680	TRF	Tandem_Repeat	35756	35791	72	+	.	.
scaffold680	subtractBed	intrn	36982	37728	.	-	.	Parent=CGI_10003337;
	scaffold680	WUBlastX	LINE_Penelope	36982	37728	255	+	.	.
scaffold680	subtractBed	intrn	36705	36977	.	-	.	Parent=CGI_10003337;
	scaffold680	WUBlastX	LINE_Penelope	36705	36977	34	+	.	.
scaffold680	subtractBed	intrn	36985	37938	.	-	.	Parent=CGI_10003337;
	scaffold680	WUBlastX	LINE_Penelope	36985	37938	146	+	.	.
scaffold681	subtractBed	intrn	32264	32737	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LTR_DIRS	32264	32737	143	-	.	.
scaffold681	subtractBed	intrn	32781	32969	.	+	.	Parent=CGI_10014717;
	scaffold681	TRF	Tandem_Repeat	32781	32969	164	+	.	.
scaffold681	subtractBed	intrn	38276	38303	.	+	.	Parent=CGI_10014717;
	scaffold681	TRF	Tandem_Repeat	38276	38303	56	+	.	.
scaffold681	subtractBed	intrn	35255	35530	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LINE_CR1	35255	35530	57	+	.	.
scaffold681	subtractBed	intrn	35132	35443	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LINE_L2	35132	35443	75	+	.	.
scaffold681	subtractBed	intrn	35177	35428	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LINE_L2	35177	35428	86	+	.	.
scaffold681	subtractBed	intrn	34994	35437	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LINE_CR1-L2	34994	35437	45	+	.	.
scaffold681	subtractBed	intrn	35261	35650	.	+	.	Parent=CGI_10014717;
	scaffold681	WUBlastX	LINE_L2	35261	35650	43	+	.	.
scaffold681	subtractBed	intrn	44259	44786	.	-	.	Parent=CGI_10014718;
	scaffold681	WUBlastX	LINE_RTE-X	44259	44786	132	-	.	.
scaffold681	subtractBed	intrn	44259	44786	.	+	.	Parent=CGI_10014719;
	scaffold681	WUBlastX	LINE_RTE-X	44259	44786	132	-	.	.
scaffold681	subtractBed	intrn	54240	54377	.	+	.	Parent=CGI_10014720;
	scaffold681	WUBlastX	DNA_TcMar-Fot1	54240	54806	29	-	.	.
scaffold681	subtractBed	intrn	58081	58134	.	+	.	Parent=CGI_10014721;
	scaffold681	TRF	Tandem_Repeat	58081	58134	65	+	.	.
scaffold681	subtractBed	intrn	58081	58127	.	+	.	Parent=CGI_10014721;
	scaffold681	TRF	Tandem_Repeat	58081	58127	64	+	.	.
scaffold681	subtractBed	intrn	59538	59596	.	+	.	Parent=CGI_10014721;
	scaffold681	TRF	Tandem_Repeat	59538	59596	111	+	.	.
scaffold681	subtractBed	intrn	57434	57772	.	+	.	Parent=CGI_10014721;
	scaffold681	WUBlastX	LINE_RTE-X	57434	57772	98	-	.	.
scaffold681	subtractBed	intrn	64848	65045	.	+	.	Parent=CGI_10014722;
	scaffold681	WUBlastX	DNA_TcMar-Fot1	64848	65045	64	-	.	.
scaffold681	subtractBed	intrn	64890	65081	.	+	.	Parent=CGI_10014722;
	scaffold681	WUBlastX	DNA_TcMar-Fot1	64890	65081	73	-	.	.
scaffold681	subtractBed	intrn	115546	115605	.	+	.	Parent=CGI_10014727;
	scaffold681	TRF	Tandem_Repeat	115546	115605	120	+	.	.
scaffold681	subtractBed	intrn	167880	167913	.	+	.	Parent=CGI_10014729;
	scaffold681	TRF	Tandem_Repeat	167880	167913	68	+	.	.
scaffold682	subtractBed	intrn	31279	31890	.	+	.	Parent=CGI_10003695;
	scaffold682	TRF	Tandem_Repeat	31246	31890	1039	+	.	.
scaffold683	subtractBed	intrn	85741	85854	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	85741	85854	83	-	.	.
scaffold683	subtractBed	intrn	81994	82086	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	81994	82086	42	-	.	.
scaffold683	subtractBed	intrn	85741	85944	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	85741	85944	53	-	.	.
scaffold683	subtractBed	intrn	84284	84376	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	84284	84376	42	-	.	.
scaffold683	subtractBed	intrn	85726	85869	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	85726	85869	78	-	.	.
scaffold683	subtractBed	intrn	84393	85721	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	84393	85721	542	-	.	.
scaffold683	subtractBed	intrn	85720	85908	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	85720	85908	69	-	.	.
scaffold683	subtractBed	intrn	82103	82888	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	82103	82888	198	-	.	.
scaffold683	subtractBed	intrn	84158	84373	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	84158	84373	36	-	.	.
scaffold683	subtractBed	intrn	81868	82083	.	+	.	Parent=CGI_10010356;
	scaffold683	WUBlastX	LINE_RTE-X	81868	82083	36	-	.	.
scaffold683	subtractBed	intrn	87133	87181	.	+	.	Parent=CGI_10010356;
	scaffold683	TRF	Tandem_Repeat	87133	87181	50	+	.	.
scaffold683	subtractBed	intrn	157019	157055	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	157019	157055	65	+	.	.
scaffold683	subtractBed	intrn	160271	160399	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_CR1-L2	160271	160399	70	-	.	.
scaffold683	subtractBed	intrn	160437	160850	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_CR1	160437	160850	61	-	.	.
scaffold683	subtractBed	intrn	160130	160435	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_CR1	160130	160435	22	-	.	.
scaffold683	subtractBed	intrn	160265	160474	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_CR1-L2	160265	160474	65	-	.	.
scaffold683	subtractBed	intrn	160190	160450	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_Jockey	160190	160450	33	-	.	.
scaffold683	subtractBed	intrn	176105	176617	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	176105	176617	190	+	.	.
scaffold683	subtractBed	intrn	176112	176610	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	176112	176610	563	+	.	.
scaffold683	subtractBed	intrn	176112	176610	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	176112	176610	536	+	.	.
scaffold683	subtractBed	intrn	176179	176566	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	176179	176566	261	+	.	.
scaffold683	subtractBed	intrn	184463	184494	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	184463	184494	55	+	.	.
scaffold683	subtractBed	intrn	184525	185647	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	184525	185647	1548	+	.	.
scaffold683	subtractBed	intrn	189898	190250	.	+	.	Parent=CGI_10010360;
	scaffold683	TRF	Tandem_Repeat	189898	190250	541	+	.	.
scaffold683	subtractBed	intrn	193580	193912	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_RTE-X	193580	193912	54	-	.	.
scaffold683	subtractBed	intrn	193324	193476	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_RTE-X	193324	193476	23	-	.	.
scaffold683	subtractBed	intrn	193580	193972	.	+	.	Parent=CGI_10010360;
	scaffold683	WUBlastX	LINE_RTE-X	193580	193972	48	-	.	.
scaffold683	subtractBed	intrn	237901	238252	.	+	.	Parent=CGI_10010361;
	scaffold683	TRF	Tandem_Repeat	237901	238252	332	+	.	.
scaffold683	subtractBed	intrn	238271	238460	.	+	.	Parent=CGI_10010361;
	scaffold683	TRF	Tandem_Repeat	238271	238460	147	+	.	.
scaffold683	subtractBed	intrn	255543	255577	.	+	.	Parent=CGI_10010362;
	scaffold683	TRF	Tandem_Repeat	255543	255577	61	+	.	.
scaffold685	subtractBed	intrn	6081	6135	.	+	.	Parent=CGI_10004488;
	scaffold685	TRF	Tandem_Repeat	6081	6135	103	+	.	.
scaffold685	subtractBed	intrn	53137	53186	.	+	.	Parent=CGI_10004491;
	scaffold685	WUBlastX	LINE_RTE-X	52995	53186	37	-	.	.
scaffold685	subtractBed	intrn	84306	84310	.	+	.	Parent=CGI_10004493;
	scaffold685	WUBlastX	DNA_Kolobok	84306	84449	73	+	.	.
scaffold685	subtractBed	intrn	84267	84310	.	+	.	Parent=CGI_10004493;
	scaffold685	WUBlastX	DNA_Kolobok	84267	84458	69	+	.	.
scaffold686	subtractBed	intrn	3812	3857	.	-	.	Parent=CGI_10004460;
	scaffold686	TRF	Tandem_Repeat	3812	3857	67	+	.	.
scaffold686	subtractBed	intrn	3807	3860	.	-	.	Parent=CGI_10004460;
	scaffold686	TRF	Tandem_Repeat	3807	3860	67	+	.	.
scaffold686	subtractBed	intrn	4144	4542	.	-	.	Parent=CGI_10004460;
	scaffold686	TRF	Tandem_Repeat	4144	4542	460	+	.	.
scaffold686	subtractBed	intrn	4186	4517	.	-	.	Parent=CGI_10004460;
	scaffold686	TRF	Tandem_Repeat	4186	4517	473	+	.	.
scaffold686	subtractBed	intrn	4144	4474	.	-	.	Parent=CGI_10004460;
	scaffold686	TRF	Tandem_Repeat	4144	4474	457	+	.	.
scaffold686	subtractBed	intrn	2521	2796	.	-	.	Parent=CGI_10004460;
	scaffold686	WUBlastX	LINE_CR1-L2	2521	2796	108	-	.	.
scaffold686	subtractBed	intrn	2584	2964	.	-	.	Parent=CGI_10004460;
	scaffold686	WUBlastX	LINE_CR1-L2	2584	2964	93	-	.	.
scaffold686	subtractBed	intrn	2581	2892	.	-	.	Parent=CGI_10004460;
	scaffold686	WUBlastX	LINE_CR1-L2	2581	2892	129	-	.	.
scaffold686	subtractBed	intrn	9588	9677	.	-	.	Parent=CGI_10004461;
	scaffold686	TRF	Tandem_Repeat	9588	9677	153	+	.	.
scaffold686	subtractBed	intrn	12223	12687	.	-	.	Parent=CGI_10004461;
	scaffold686	WUBlastX	DNA_TcMar-Tc1	12223	12687	244	+	.	.
scaffold686	subtractBed	intrn	15977	16336	.	-	.	Parent=CGI_10004461;
	scaffold686	WUBlastX	LINE_L1-Tx1	15977	16336	39	-	.	.
scaffold686	subtractBed	intrn	31889	32035	.	-	.	Parent=CGI_10004462;
	scaffold686	WUBlastX	DNA_PiggyBac	31889	32035	32	+	.	.
scaffold686	subtractBed	intrn	32662	32751	.	-	.	Parent=CGI_10004462;
	scaffold686	WUBlastX	DNA_PiggyBac	32662	32751	52	+	.	.
scaffold686	subtractBed	intrn	32641	32751	.	-	.	Parent=CGI_10004462;
	scaffold686	WUBlastX	DNA_PiggyBac	32641	32751	38	+	.	.
scaffold686	subtractBed	intrn	32956	33309	.	-	.	Parent=CGI_10004462;
	scaffold686	WUBlastX	DNA_PiggyBac	32956	33309	54	+	.	.
scaffold686	subtractBed	intrn	82610	82662	.	-	.	Parent=CGI_10004466;
	scaffold686	TRF	Tandem_Repeat	82610	82662	97	+	.	.
scaffold689	subtractBed	intrn	166225	166281	.	-	.	Parent=CGI_10014826;
	scaffold689	WUBlastX	LINE_RTE-BovB	166225	166281	24	+	.	.
scaffold689	subtractBed	intrn	167047	167108	.	-	.	Parent=CGI_10014826;
	scaffold689	TRF	Tandem_Repeat	167047	167108	124	+	.	.
scaffold689	subtractBed	intrn	168686	169219	.	-	.	Parent=CGI_10014826;
	scaffold689	WUBlastX	LINE_RTE-X	168686	169219	66	+	.	.
scaffold689	subtractBed	intrn	166991	167013	.	-	.	Parent=CGI_10014826;
	scaffold689	WUBlastX	LINE_CR1	166963	167013	25	+	.	.
scaffold689	subtractBed	intrn	169222	169749	.	-	.	Parent=CGI_10014826;
	scaffold689	WUBlastX	LINE_RTE-X	169222	169749	71	+	.	.
scaffold689	subtractBed	intrn	167370	169031	.	-	.	Parent=CGI_10014826;
	scaffold689	WUBlastX	LINE_RTE-X	167370	169031	703	+	.	.
scaffold689	subtractBed	intrn	171398	171486	.	-	.	Parent=CGI_10014826;
	scaffold689	TRF	Tandem_Repeat	171398	171486	108	+	.	.
scaffold689	subtractBed	intrn	269912	270187	.	-	.	Parent=CGI_10014829;
	scaffold689	WUBlastX	LINE_R2-Hero	269912	270187	219	+	.	.
scaffold689	subtractBed	intrn	269819	270187	.	-	.	Parent=CGI_10014829;
	scaffold689	WUBlastX	LINE_R2-Hero	269819	270187	203	+	.	.
scaffold689	subtractBed	intrn	345979	346044	.	-	.	Parent=CGI_10014831;
	scaffold689	TRF	Tandem_Repeat	345979	346044	132	+	.	.
scaffold689	subtractBed	intrn	351800	351851	.	-	.	Parent=CGI_10014831;
	scaffold689	TRF	Tandem_Repeat	351800	351851	77	+	.	.
scaffold689	subtractBed	intrn	357020	357970	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy	357020	357970	249	+	.	.
scaffold689	subtractBed	intrn	354999	355964	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy	354999	355964	20	+	.	.
scaffold689	subtractBed	intrn	355173	355958	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy	355173	355958	392	+	.	.
scaffold689	subtractBed	intrn	356234	357646	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy	356234	357646	939	+	.	.
scaffold689	subtractBed	intrn	355254	356144	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy	355254	356144	88	+	.	.
scaffold689	subtractBed	intrn	357056	357790	.	-	.	Parent=CGI_10014831;
	scaffold689	WUBlastX	LTR_Gypsy-Cigr	357056	357790	335	+	.	.
scaffold689	subtractBed	intrn	365189	366097	.	-	.	Parent=CGI_10014831;
	scaffold689	TRF	Tandem_Repeat	365189	366097	1606	+	.	.
scaffold689	subtractBed	intrn	381227	381390	.	-	.	Parent=CGI_10014832;
	scaffold689	TRF	Tandem_Repeat	381227	381390	160	+	.	.
scaffold689	subtractBed	intrn	381305	381391	.	-	.	Parent=CGI_10014832;
	scaffold689	TRF	Tandem_Repeat	381305	381391	61	+	.	.
scaffold689	subtractBed	intrn	381310	381622	.	-	.	Parent=CGI_10014832;
	scaffold689	TRF	Tandem_Repeat	381310	381622	291	+	.	.
scaffold689	subtractBed	intrn	381310	381647	.	-	.	Parent=CGI_10014832;
	scaffold689	TRF	Tandem_Repeat	381310	381647	289	+	.	.
scaffold689	subtractBed	intrn	387953	388205	.	-	.	Parent=CGI_10014832;
	scaffold689	TRF	Tandem_Repeat	387953	388205	389	+	.	.
scaffold693	subtractBed	intrn	8597	8655	.	-	.	Parent=CGI_10000930;
	scaffold693	TRF	Tandem_Repeat	8597	8655	118	+	.	.
scaffold693	subtractBed	intrn	9933	9971	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	9933	9971	25	+	.	.
scaffold693	subtractBed	intrn	10157	10423	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10157	10423	29	+	.	.
scaffold693	subtractBed	intrn	10974	11165	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10974	11165	37	+	.	.
scaffold693	subtractBed	intrn	10974	11105	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10974	11105	54	+	.	.
scaffold693	subtractBed	intrn	10046	10360	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10046	10360	21	+	.	.
scaffold693	subtractBed	intrn	10175	10360	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10175	10360	55	+	.	.
scaffold693	subtractBed	intrn	10491	10583	.	-	.	Parent=CGI_10000930;
	scaffold693	WUBlastX	LINE_RTE-BovB	10491	10583	37	+	.	.
scaffold694	subtractBed	intrn	23753	23805	.	+	.	Parent=CGI_10008108;
	scaffold694	TRF	Tandem_Repeat	23753	23805	74	+	.	.
scaffold694	subtractBed	intrn	35106	35151	.	+	.	Parent=CGI_10008108;
	scaffold694	TRF	Tandem_Repeat	35106	35151	92	+	.	.
scaffold694	subtractBed	intrn	40061	40110	.	+	.	Parent=CGI_10008108;
	scaffold694	TRF	Tandem_Repeat	40061	40110	100	+	.	.
scaffold694	subtractBed	intrn	42323	42370	.	+	.	Parent=CGI_10008108;
	scaffold694	TRF	Tandem_Repeat	42323	42370	96	+	.	.
scaffold694	subtractBed	intrn	52080	52148	.	+	.	Parent=CGI_10008108;
	scaffold694	TRF	Tandem_Repeat	52080	52148	129	+	.	.
scaffold694	subtractBed	intrn	130740	130787	.	+	.	Parent=CGI_10008109;
	scaffold694	TRF	Tandem_Repeat	130740	130787	96	+	.	.
scaffold694	subtractBed	intrn	131743	132578	.	+	.	Parent=CGI_10008109;
	scaffold694	TRF	Tandem_Repeat	131743	132578	1090	+	.	.
scaffold694	subtractBed	intrn	150682	150706	.	+	.	Parent=CGI_10008110;
	scaffold694	TRF	Tandem_Repeat	150682	150706	50	+	.	.
scaffold694	subtractBed	intrn	150839	150954	.	+	.	Parent=CGI_10008110;
	scaffold694	TRF	Tandem_Repeat	150839	150954	117	+	.	.
scaffold695	subtractBed	intrn	6935	7005	.	+	.	Parent=CGI_10023266;
	scaffold695	TRF	Tandem_Repeat	6935	7005	142	+	.	.
scaffold695	subtractBed	intrn	8541	8759	.	+	.	Parent=CGI_10023266;
	scaffold695	WUBlastX	DNA_Harbinger	8541	8759	69	-	.	.
scaffold695	subtractBed	intrn	7118	7453	.	+	.	Parent=CGI_10023266;
	scaffold695	WUBlastX	DNA_Harbinger	7118	7453	178	-	.	.
scaffold695	subtractBed	intrn	82445	83156	.	-	.	Parent=CGI_10023267;
	scaffold695	TRF	Tandem_Repeat	82445	83156	993	+	.	.
scaffold695	subtractBed	intrn	87652	87689	.	-	.	Parent=CGI_10023267;
	scaffold695	TRF	Tandem_Repeat	87652	87689	76	+	.	.
scaffold695	subtractBed	intrn	90801	90854	.	-	.	Parent=CGI_10023267;
	scaffold695	TRF	Tandem_Repeat	90801	90854	64	+	.	.
scaffold695	subtractBed	intrn	90813	90854	.	-	.	Parent=CGI_10023267;
	scaffold695	TRF	Tandem_Repeat	90813	90854	57	+	.	.
scaffold695	subtractBed	intrn	93286	93399	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	93286	93399	25	-	.	.
scaffold695	subtractBed	intrn	90554	90781	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90554	90781	57	-	.	.
scaffold695	subtractBed	intrn	90554	90730	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90554	90730	103	-	.	.
scaffold695	subtractBed	intrn	89729	89935	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89729	89935	56	-	.	.
scaffold695	subtractBed	intrn	90259	90453	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90259	90453	26	-	.	.
scaffold695	subtractBed	intrn	89935	90057	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89935	90057	55	-	.	.
scaffold695	subtractBed	intrn	93396	93689	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	93396	93689	36	-	.	.
scaffold695	subtractBed	intrn	93658	93870	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	93658	93870	56	-	.	.
scaffold695	subtractBed	intrn	89935	90108	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89935	90108	47	-	.	.
scaffold695	subtractBed	intrn	89553	89888	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89553	89888	173	-	.	.
scaffold695	subtractBed	intrn	88595	88651	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	88595	88651	20	-	.	.
scaffold695	subtractBed	intrn	90382	90495	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	90382	90495	40	-	.	.
scaffold695	subtractBed	intrn	90325	90444	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90325	90444	37	-	.	.
scaffold695	subtractBed	intrn	88604	88663	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	88604	88663	26	-	.	.
scaffold695	subtractBed	intrn	90590	90736	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90590	90736	104	-	.	.
scaffold695	subtractBed	intrn	89200	89310	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89200	89310	29	-	.	.
scaffold695	subtractBed	intrn	89242	89325	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	89242	89325	28	-	.	.
scaffold695	subtractBed	intrn	90509	90733	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	90509	90733	78	-	.	.
scaffold695	subtractBed	intrn	93706	93870	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	93706	93870	83	-	.	.
scaffold695	subtractBed	intrn	89331	89879	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89331	89879	87	-	.	.
scaffold695	subtractBed	intrn	89024	89170	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	89024	89170	31	-	.	.
scaffold695	subtractBed	intrn	88747	88845	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	88747	88845	22	-	.	.
scaffold695	subtractBed	intrn	88607	88648	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	88607	88648	27	-	.	.
scaffold695	subtractBed	intrn	98923	99558	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	98923	99558	114	-	.	.
scaffold695	subtractBed	intrn	98441	98563	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	98441	98563	39	-	.	.
scaffold695	subtractBed	intrn	97992	98477	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1	97992	98477	66	-	.	.
scaffold695	subtractBed	intrn	97923	98375	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	97923	98375	120	-	.	.
scaffold695	subtractBed	intrn	97998	98387	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	97998	98387	153	-	.	.
scaffold695	subtractBed	intrn	97836	98411	.	-	.	Parent=CGI_10023267;
	scaffold695	WUBlastX	LINE_L1-Tx1	97836	98411	42	-	.	.
scaffold695	subtractBed	intrn	134490	134551	.	-	.	Parent=CGI_10023268;
	scaffold695	TRF	Tandem_Repeat	134490	134551	65	+	.	.
scaffold695	subtractBed	intrn	142281	142367	.	-	.	Parent=CGI_10023269;
	scaffold695	TRF	Tandem_Repeat	142281	142367	81	+	.	.
scaffold695	subtractBed	intrn	157085	158406	.	-	.	Parent=CGI_10023270;
	scaffold695	TRF	Tandem_Repeat	157085	158437	1422	+	.	.
scaffold695	subtractBed	intrn	157085	158406	.	-	.	Parent=CGI_10023270;
	scaffold695	TRF	Tandem_Repeat	157085	158437	1471	+	.	.
scaffold695	subtractBed	intrn	157085	158406	.	-	.	Parent=CGI_10023270;
	scaffold695	TRF	Tandem_Repeat	157085	158437	1589	+	.	.
scaffold695	subtractBed	intrn	163210	163279	.	-	.	Parent=CGI_10023271;
	scaffold695	TRF	Tandem_Repeat	163210	163279	140	+	.	.
scaffold695	subtractBed	intrn	167888	168769	.	-	.	Parent=CGI_10023271;
	scaffold695	TRF	Tandem_Repeat	167888	168769	978	+	.	.
scaffold695	subtractBed	intrn	171487	171539	.	-	.	Parent=CGI_10023271;
	scaffold695	TRF	Tandem_Repeat	171487	171539	88	+	.	.
scaffold695	subtractBed	intrn	192872	192938	.	-	.	Parent=CGI_10023273;
	scaffold695	TRF	Tandem_Repeat	192872	192938	134	+	.	.
scaffold695	subtractBed	intrn	241837	241880	.	-	.	Parent=CGI_10023276;
	scaffold695	TRF	Tandem_Repeat	241837	241880	88	+	.	.
scaffold695	subtractBed	intrn	287732	287764	.	-	.	Parent=CGI_10023280;
	scaffold695	TRF	Tandem_Repeat	287732	287764	57	+	.	.
scaffold695	subtractBed	intrn	295700	295737	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	295700	295737	76	+	.	.
scaffold695	subtractBed	intrn	302675	303104	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	302675	303104	743	+	.	.
scaffold695	subtractBed	intrn	309470	309884	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	309470	309884	303	+	.	.
scaffold695	subtractBed	intrn	309470	309884	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	309470	309884	369	+	.	.
scaffold695	subtractBed	intrn	310249	310849	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	310249	310849	587	+	.	.
scaffold695	subtractBed	intrn	310254	310849	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	310254	310849	524	+	.	.
scaffold695	subtractBed	intrn	310249	310917	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	310249	310917	709	+	.	.
scaffold695	subtractBed	intrn	317752	317981	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	317752	317981	135	+	.	.
scaffold695	subtractBed	intrn	317785	318323	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	317785	318323	426	+	.	.
scaffold695	subtractBed	intrn	317777	318014	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	317777	318014	190	+	.	.
scaffold695	subtractBed	intrn	318751	318963	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	318751	318963	124	+	.	.
scaffold695	subtractBed	intrn	318991	319328	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	318991	319328	220	+	.	.
scaffold695	subtractBed	intrn	319144	319568	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	319144	319568	284	+	.	.
scaffold695	subtractBed	intrn	327813	327864	.	-	.	Parent=CGI_10023281;
	scaffold695	TRF	Tandem_Repeat	327813	327864	104	+	.	.
scaffold695	subtractBed	intrn	383367	383421	.	-	.	Parent=CGI_10023285;
	scaffold695	TRF	Tandem_Repeat	383367	383421	110	+	.	.
scaffold695	subtractBed	intrn	432746	432807	.	-	.	Parent=CGI_10023286;
	scaffold695	TRF	Tandem_Repeat	432746	432807	124	+	.	.
scaffold695	subtractBed	intrn	433436	433479	.	-	.	Parent=CGI_10023286;
	scaffold695	TRF	Tandem_Repeat	433436	433479	88	+	.	.
scaffold695	subtractBed	intrn	484937	484990	.	-	.	Parent=CGI_10023292;
	scaffold695	TRF	Tandem_Repeat	484937	484990	108	+	.	.
scaffold695	subtractBed	intrn	643021	643068	.	+	.	Parent=CGI_10023298;
	scaffold695	TRF	Tandem_Repeat	643021	643068	96	+	.	.
scaffold695	subtractBed	intrn	656777	656831	.	-	.	Parent=CGI_10023300;
	scaffold695	TRF	Tandem_Repeat	656777	656831	110	+	.	.
scaffold695	subtractBed	intrn	664629	664676	.	-	.	Parent=CGI_10023300;
	scaffold695	TRF	Tandem_Repeat	664629	664676	96	+	.	.
scaffold695	subtractBed	intrn	670054	670084	.	-	.	Parent=CGI_10023300;
	scaffold695	TRF	Tandem_Repeat	670054	670084	62	+	.	.
scaffold695	subtractBed	intrn	677284	677355	.	-	.	Parent=CGI_10023300;
	scaffold695	TRF	Tandem_Repeat	677284	677355	144	+	.	.
scaffold695	subtractBed	intrn	680674	680737	.	-	.	Parent=CGI_10023301;
	scaffold695	TRF	Tandem_Repeat	680674	680737	128	+	.	.
scaffold695	subtractBed	intrn	681463	681798	.	-	.	Parent=CGI_10023301;
	scaffold695	WUBlastX	DNA_Sola	681463	681798	176	+	.	.
scaffold695	subtractBed	intrn	681165	681380	.	-	.	Parent=CGI_10023301;
	scaffold695	WUBlastX	DNA_Sola	681165	681380	39	+	.	.
scaffold695	subtractBed	intrn	684411	684474	.	-	.	Parent=CGI_10023301;
	scaffold695	TRF	Tandem_Repeat	684411	684474	121	+	.	.
scaffold695	subtractBed	intrn	688958	689014	.	-	.	Parent=CGI_10023302;
	scaffold695	TRF	Tandem_Repeat	688958	689014	98	+	.	.
scaffold695	subtractBed	intrn	715010	715111	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_L1	715010	715111	26	+	.	.
scaffold695	subtractBed	intrn	715568	716821	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_RTE-BovB	715568	716821	528	+	.	.
scaffold695	subtractBed	intrn	715568	716179	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_RTE-BovB	715568	716179	602	+	.	.
scaffold695	subtractBed	intrn	716797	716871	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_RTE-BovB	716797	716871	35	+	.	.
scaffold695	subtractBed	intrn	715568	716314	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_RTE-BovB	715568	716314	559	+	.	.
scaffold695	subtractBed	intrn	714861	714908	.	-	.	Parent=CGI_10023304;
	scaffold695	WUBlastX	LINE_CR1	714861	714908	20	+	.	.
scaffold695	subtractBed	intrn	772162	772186	.	+	.	Parent=CGI_10023306;
	scaffold695	TRF	Tandem_Repeat	772162	772186	50	+	.	.
scaffold695	subtractBed	intrn	772162	772186	.	-	.	Parent=CGI_10023307;
	scaffold695	TRF	Tandem_Repeat	772162	772186	50	+	.	.
scaffold696	subtractBed	intrn	10494	10530	.	+	.	Parent=CGI_10003719;
	scaffold696	TRF	Tandem_Repeat	10494	10530	65	+	.	.
scaffold696	subtractBed	intrn	8219	8902	.	+	.	Parent=CGI_10003719;
	scaffold696	WUBlastX	LINE_RTE-X	8219	8902	31	+	.	.
scaffold696	subtractBed	intrn	12222	12246	.	+	.	Parent=CGI_10003719;
	scaffold696	TRF	Tandem_Repeat	12222	12246	50	+	.	.
scaffold696	subtractBed	intrn	11510	12019	.	+	.	Parent=CGI_10003719;
	scaffold696	WUBlastX	LINE_RTE-X	11510	12019	74	+	.	.
scaffold696	subtractBed	intrn	11591	12022	.	+	.	Parent=CGI_10003719;
	scaffold696	WUBlastX	LINE_RTE-X	11591	12022	114	+	.	.
scaffold696	subtractBed	intrn	51452	52907	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	51452	52907	2286	+	.	.
scaffold696	subtractBed	intrn	51452	52907	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	51452	52907	2239	+	.	.
scaffold696	subtractBed	intrn	52931	52984	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	52931	52984	54	+	.	.
scaffold696	subtractBed	intrn	52931	52997	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	52931	52997	89	+	.	.
scaffold696	subtractBed	intrn	52938	52997	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	52938	52997	75	+	.	.
scaffold696	subtractBed	intrn	56592	56629	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	56592	56629	58	+	.	.
scaffold696	subtractBed	intrn	56629	56656	.	-	.	Parent=CGI_10003721;
	scaffold696	TRF	Tandem_Repeat	56629	56656	56	+	.	.
scaffold696	subtractBed	intrn	65278	66138	.	+	.	Parent=CGI_10003722;
	scaffold696	TRF	Tandem_Repeat	65278	66138	1268	+	.	.
scaffold696	subtractBed	intrn	71989	72088	.	-	.	Parent=CGI_10003723;
	scaffold696	TRF	Tandem_Repeat	71989	72088	191	+	.	.
scaffold698	subtractBed	intrn	23658	23690	.	-	.	Parent=CGI_10020722;
	scaffold698	TRF	Tandem_Repeat	23658	23690	57	+	.	.
scaffold698	subtractBed	intrn	39757	39922	.	+	.	Parent=CGI_10020725;
	scaffold698	TRF	Tandem_Repeat	39757	39922	260	+	.	.
scaffold698	subtractBed	intrn	52631	52685	.	+	.	Parent=CGI_10020726;
	scaffold698	TRF	Tandem_Repeat	52631	52685	110	+	.	.
scaffold698	subtractBed	intrn	51247	51423	.	+	.	Parent=CGI_10020726;
	scaffold698	WUBlastX	LINE_RTE-X	51247	51423	67	-	.	.
scaffold698	subtractBed	intrn	51277	51423	.	+	.	Parent=CGI_10020726;
	scaffold698	WUBlastX	LINE_RTE-X	51277	51423	76	-	.	.
scaffold698	subtractBed	intrn	67072	67366	.	+	.	Parent=CGI_10020726;
	scaffold698	TRF	Tandem_Repeat	67072	67366	265	+	.	.
scaffold698	subtractBed	intrn	67758	68069	.	+	.	Parent=CGI_10020726;
	scaffold698	WUBlastX	DNA_Harbinger	67758	68069	104	-	.	.
scaffold698	subtractBed	intrn	82737	84845	.	-	.	Parent=CGI_10020727;
	scaffold698	WUBlastX	LTR_DIRS	82737	84845	354	-	.	.
scaffold698	subtractBed	intrn	82728	84389	.	-	.	Parent=CGI_10020727;
	scaffold698	WUBlastX	LTR_DIRS	82728	84389	1217	-	.	.
scaffold698	subtractBed	intrn	84824	84979	.	-	.	Parent=CGI_10020727;
	scaffold698	WUBlastX	LTR_Gypsy	84824	84979	41	-	.	.
scaffold698	subtractBed	intrn	81946	82725	.	-	.	Parent=CGI_10020727;
	scaffold698	WUBlastX	LTR_DIRS	81946	82725	446	-	.	.
scaffold698	subtractBed	intrn	98899	98928	.	+	.	Parent=CGI_10020728;
	scaffold698	TRF	Tandem_Repeat	98899	98928	51	+	.	.
scaffold698	subtractBed	intrn	111669	111704	.	-	.	Parent=CGI_10020729;
	scaffold698	TRF	Tandem_Repeat	111669	111704	63	+	.	.
scaffold698	subtractBed	intrn	147995	148056	.	-	.	Parent=CGI_10020733;
	scaffold698	TRF	Tandem_Repeat	147995	148056	124	+	.	.
scaffold698	subtractBed	intrn	210115	210168	.	+	.	Parent=CGI_10020735;
	scaffold698	TRF	Tandem_Repeat	210115	210168	108	+	.	.
scaffold698	subtractBed	intrn	218893	218966	.	+	.	Parent=CGI_10020736;
	scaffold698	TRF	Tandem_Repeat	218893	218966	139	+	.	.
scaffold698	subtractBed	intrn	216571	217209	.	+	.	Parent=CGI_10020736;
	scaffold698	WUBlastX	LINE_L1-Tx1	216571	217209	92	-	.	.
scaffold698	subtractBed	intrn	216274	217083	.	+	.	Parent=CGI_10020736;
	scaffold698	WUBlastX	LINE_L1	216274	217083	54	-	.	.
scaffold698	subtractBed	intrn	216460	217080	.	+	.	Parent=CGI_10020736;
	scaffold698	WUBlastX	LINE_L1-Tx1	216460	217080	260	-	.	.
scaffold698	subtractBed	intrn	217320	217403	.	+	.	Parent=CGI_10020736;
	scaffold698	WUBlastX	LINE_L1	217320	217403	25	-	.	.
scaffold698	subtractBed	intrn	223543	223668	.	+	.	Parent=CGI_10020736;
	scaffold698	TRF	Tandem_Repeat	223543	223668	148	+	.	.
scaffold698	subtractBed	intrn	234500	234553	.	-	.	Parent=CGI_10020737;
	scaffold698	TRF	Tandem_Repeat	234500	234553	108	+	.	.
scaffold698	subtractBed	intrn	239481	239582	.	-	.	Parent=CGI_10020737;
	scaffold698	TRF	Tandem_Repeat	239481	239582	172	+	.	.
scaffold698	subtractBed	intrn	246236	246514	.	+	.	Parent=CGI_10020738;
	scaffold698	WUBlastX	LINE_CR1-L2	246236	246514	36	-	.	.
scaffold698	subtractBed	intrn	256279	256337	.	+	.	Parent=CGI_10020739;
	scaffold698	TRF	Tandem_Repeat	256279	256337	118	+	.	.
scaffold698	subtractBed	intrn	332801	333074	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	332801	333074	314	+	.	.
scaffold698	subtractBed	intrn	332800	333074	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	332800	333074	316	+	.	.
scaffold698	subtractBed	intrn	332801	333074	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	332801	333074	393	+	.	.
scaffold698	subtractBed	intrn	333734	334080	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	333734	334080	568	+	.	.
scaffold698	subtractBed	intrn	333734	334037	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	333734	334037	348	+	.	.
scaffold698	subtractBed	intrn	333734	334081	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	333734	334081	318	+	.	.
scaffold698	subtractBed	intrn	337145	337225	.	-	.	Parent=CGI_10020741;
	scaffold698	TRF	Tandem_Repeat	337145	337225	153	+	.	.
scaffold698	subtractBed	intrn	353444	353499	.	-	.	Parent=CGI_10020742;
	scaffold698	TRF	Tandem_Repeat	353444	353499	112	+	.	.
scaffold698	subtractBed	intrn	355193	356046	.	-	.	Parent=CGI_10020742;
	scaffold698	TRF	Tandem_Repeat	355193	356046	1007	+	.	.
scaffold698	subtractBed	intrn	368442	368482	.	-	.	Parent=CGI_10020743;
	scaffold698	TRF	Tandem_Repeat	368442	368482	82	+	.	.
scaffold698	subtractBed	intrn	378864	378920	.	+	.	Parent=CGI_10020745;
	scaffold698	TRF	Tandem_Repeat	378864	378920	114	+	.	.
scaffold698	subtractBed	intrn	422852	422913	.	+	.	Parent=CGI_10020749;
	scaffold698	TRF	Tandem_Repeat	422852	422913	51	+	.	.
scaffold698	subtractBed	intrn	448620	448660	.	-	.	Parent=CGI_10020751;
	scaffold698	TRF	Tandem_Repeat	448620	448660	82	+	.	.
scaffold698	subtractBed	intrn	554683	554786	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	554683	554786	178	+	.	.
scaffold698	subtractBed	intrn	557867	558247	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	557867	558289	388	+	.	.
scaffold698	subtractBed	intrn	559838	560110	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	559838	560110	165	+	.	.
scaffold698	subtractBed	intrn	563144	563190	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	563144	563190	94	+	.	.
scaffold698	subtractBed	intrn	567917	567961	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	567917	567961	54	+	.	.
scaffold698	subtractBed	intrn	568090	568449	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	568090	568449	332	+	.	.
scaffold698	subtractBed	intrn	568233	568449	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	568233	568449	380	+	.	.
scaffold698	subtractBed	intrn	570948	570997	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	570948	570997	100	+	.	.
scaffold698	subtractBed	intrn	572457	572542	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	572457	572542	163	+	.	.
scaffold698	subtractBed	intrn	576283	576617	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	576283	576617	162	+	.	.
scaffold698	subtractBed	intrn	573427	574111	.	-	.	Parent=CGI_10020754;
	scaffold698	TRF	Tandem_Repeat	573427	574111	1118	+	.	.
scaffold698	subtractBed	intrn	583855	584229	.	+	.	Parent=CGI_10020755;
	scaffold698	TRF	Tandem_Repeat	583855	584229	732	+	.	.
scaffold698	subtractBed	intrn	587477	587510	.	+	.	Parent=CGI_10020755;
	scaffold698	TRF	Tandem_Repeat	587477	587510	68	+	.	.
scaffold698	subtractBed	intrn	587508	587553	.	+	.	Parent=CGI_10020755;
	scaffold698	TRF	Tandem_Repeat	587508	587553	92	+	.	.
scaffold698	subtractBed	intrn	621961	622530	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	621961	622530	420	+	.	.
scaffold698	subtractBed	intrn	621573	622642	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	621573	622642	1125	+	.	.
scaffold698	subtractBed	intrn	626158	627215	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	626158	627215	884	+	.	.
scaffold698	subtractBed	intrn	626158	627215	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	626158	627215	1118	+	.	.
scaffold698	subtractBed	intrn	626158	627215	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	626158	627215	1118	+	.	.
scaffold698	subtractBed	intrn	629301	629426	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	629301	629426	64	+	.	.
scaffold698	subtractBed	intrn	629374	629426	.	-	.	Parent=CGI_10020757;
	scaffold698	TRF	Tandem_Repeat	629374	629426	97	+	.	.
scaffold698	subtractBed	intrn	656371	656714	.	-	.	Parent=CGI_10020758;
	scaffold698	TRF	Tandem_Repeat	656349	656714	632	+	.	.
scaffold70	subtractBed	intrn	39658	39924	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	39658	39924	276	+	.	.
scaffold70	subtractBed	intrn	40982	41394	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	40982	41422	428	+	.	.
scaffold70	subtractBed	intrn	43601	43918	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	43555	43918	524	+	.	.
scaffold70	subtractBed	intrn	44740	44780	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	44740	44780	82	+	.	.
scaffold70	subtractBed	intrn	46581	46891	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	46581	46891	370	+	.	.
scaffold70	subtractBed	intrn	50287	50604	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	50287	50604	406	+	.	.
scaffold70	subtractBed	intrn	52776	52833	.	+	.	Parent=CGI_10024751;
	scaffold70	TRF	Tandem_Repeat	52776	52833	100	+	.	.
scaffold70	subtractBed	intrn	68807	68854	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	68807	68854	75	+	.	.
scaffold70	subtractBed	intrn	70005	70310	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	70005	70310	452	+	.	.
scaffold70	subtractBed	intrn	70383	71771	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	70383	71771	633	+	.	.
scaffold70	subtractBed	intrn	70383	70834	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	70383	70834	534	+	.	.
scaffold70	subtractBed	intrn	70938	71769	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	70938	71769	778	+	.	.
scaffold70	subtractBed	intrn	70935	71769	.	-	.	Parent=CGI_10024753;
	scaffold70	TRF	Tandem_Repeat	70935	71769	953	+	.	.
scaffold70	subtractBed	intrn	120005	120889	.	-	.	Parent=CGI_10024754;
	scaffold70	WUBlastX	DNA_TcMar-m44	120005	120889	559	+	.	.
scaffold70	subtractBed	intrn	122718	123173	.	-	.	Parent=CGI_10024754;
	scaffold70	TRF	Tandem_Repeat	122718	123173	756	+	.	.
scaffold70	subtractBed	intrn	126680	126831	.	-	.	Parent=CGI_10024754;
	scaffold70	TRF	Tandem_Repeat	126680	126831	151	+	.	.
scaffold70	subtractBed	intrn	126687	126808	.	-	.	Parent=CGI_10024754;
	scaffold70	TRF	Tandem_Repeat	126687	126808	127	+	.	.
scaffold70	subtractBed	intrn	151951	151978	.	-	.	Parent=CGI_10024758;
	scaffold70	TRF	Tandem_Repeat	151951	151978	56	+	.	.
scaffold70	subtractBed	intrn	208959	209115	.	-	.	Parent=CGI_10024760;
	scaffold70	TRF	Tandem_Repeat	208959	209115	212	+	.	.
scaffold70	subtractBed	intrn	269038	269082	.	+	.	Parent=CGI_10024762;
	scaffold70	TRF	Tandem_Repeat	269038	269082	74	+	.	.
scaffold70	subtractBed	intrn	271864	272186	.	+	.	Parent=CGI_10024762;
	scaffold70	TRF	Tandem_Repeat	271864	272186	329	+	.	.
scaffold70	subtractBed	intrn	368239	368357	.	+	.	Parent=CGI_10024765;
	scaffold70	TRF	Tandem_Repeat	368239	368357	91	+	.	.
scaffold70	subtractBed	intrn	368933	369026	.	+	.	Parent=CGI_10024765;
	scaffold70	TRF	Tandem_Repeat	368933	369026	116	+	.	.
scaffold70	subtractBed	intrn	369075	369173	.	+	.	Parent=CGI_10024765;
	scaffold70	TRF	Tandem_Repeat	369075	369173	182	+	.	.
scaffold70	subtractBed	intrn	371923	371967	.	+	.	Parent=CGI_10024765;
	scaffold70	TRF	Tandem_Repeat	371923	371967	60	+	.	.
scaffold70	subtractBed	intrn	376958	377607	.	-	.	Parent=CGI_10024766;
	scaffold70	TRF	Tandem_Repeat	376958	377607	821	+	.	.
scaffold70	subtractBed	intrn	382884	382908	.	+	.	Parent=CGI_10024767;
	scaffold70	TRF	Tandem_Repeat	382884	382908	50	+	.	.
scaffold70	subtractBed	intrn	383117	383180	.	+	.	Parent=CGI_10024767;
	scaffold70	TRF	Tandem_Repeat	383117	383180	128	+	.	.
scaffold70	subtractBed	intrn	402474	402503	.	+	.	Parent=CGI_10024768;
	scaffold70	TRF	Tandem_Repeat	402474	402503	51	+	.	.
scaffold70	subtractBed	intrn	447747	447798	.	-	.	Parent=CGI_10024769;
	scaffold70	TRF	Tandem_Repeat	447747	447798	104	+	.	.
scaffold70	subtractBed	intrn	482968	483020	.	-	.	Parent=CGI_10024772;
	scaffold70	TRF	Tandem_Repeat	482968	483020	88	+	.	.
scaffold70	subtractBed	intrn	487894	487918	.	-	.	Parent=CGI_10024772;
	scaffold70	TRF	Tandem_Repeat	487894	487918	50	+	.	.
scaffold70	subtractBed	intrn	493098	493262	.	-	.	Parent=CGI_10024772;
	scaffold70	TRF	Tandem_Repeat	493098	493262	276	+	.	.
scaffold70	subtractBed	intrn	503839	503880	.	-	.	Parent=CGI_10024774;
	scaffold70	TRF	Tandem_Repeat	503839	503880	84	+	.	.
scaffold70	subtractBed	intrn	515356	515393	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515356	515493	29	-	.	.
scaffold70	subtractBed	intrn	515353	515393	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515353	515790	22	-	.	.
scaffold70	subtractBed	intrn	515514	515606	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515514	515606	34	-	.	.
scaffold70	subtractBed	intrn	517610	517780	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	517610	517780	83	-	.	.
scaffold70	subtractBed	intrn	515432	515493	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515356	515493	29	-	.	.
scaffold70	subtractBed	intrn	515656	515790	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515656	515790	48	-	.	.
scaffold70	subtractBed	intrn	515432	515790	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_RTE-X	515353	515790	22	-	.	.
scaffold70	subtractBed	intrn	517972	518127	.	-	.	Parent=CGI_10024774;
	scaffold70	WUBlastX	LINE_CR1-L2	517972	518127	43	+	.	.
scaffold70	subtractBed	intrn	525492	525532	.	-	.	Parent=CGI_10024774;
	scaffold70	TRF	Tandem_Repeat	525492	525532	82	+	.	.
scaffold70	subtractBed	intrn	527825	527906	.	-	.	Parent=CGI_10024774;
	scaffold70	TRF	Tandem_Repeat	527825	527906	92	+	.	.
scaffold70	subtractBed	intrn	527843	527956	.	-	.	Parent=CGI_10024774;
	scaffold70	TRF	Tandem_Repeat	527843	527956	84	+	.	.
scaffold70	subtractBed	intrn	515356	515393	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515356	515493	29	-	.	.
scaffold70	subtractBed	intrn	515353	515393	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515353	515790	22	-	.	.
scaffold70	subtractBed	intrn	515514	515606	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515514	515606	34	-	.	.
scaffold70	subtractBed	intrn	517610	517780	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	517610	517780	83	-	.	.
scaffold70	subtractBed	intrn	515432	515493	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515356	515493	29	-	.	.
scaffold70	subtractBed	intrn	515656	515790	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515656	515790	48	-	.	.
scaffold70	subtractBed	intrn	515432	515790	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_RTE-X	515353	515790	22	-	.	.
scaffold70	subtractBed	intrn	517972	518127	.	+	.	Parent=CGI_10024775;
	scaffold70	WUBlastX	LINE_CR1-L2	517972	518127	43	+	.	.
scaffold70	subtractBed	intrn	534157	534197	.	+	.	Parent=CGI_10024776;
	scaffold70	TRF	Tandem_Repeat	534157	534197	73	+	.	.
scaffold70	subtractBed	intrn	543945	543986	.	+	.	Parent=CGI_10024777;
	scaffold70	TRF	Tandem_Repeat	543945	543986	57	+	.	.
scaffold70	subtractBed	intrn	544033	544068	.	+	.	Parent=CGI_10024777;
	scaffold70	TRF	Tandem_Repeat	544033	544068	72	+	.	.
scaffold70	subtractBed	intrn	549036	549284	.	+	.	Parent=CGI_10024777;
	scaffold70	TRF	Tandem_Repeat	549036	549284	295	+	.	.
scaffold70	subtractBed	intrn	549629	550526	.	+	.	Parent=CGI_10024777;
	scaffold70	TRF	Tandem_Repeat	549629	550526	1521	+	.	.
scaffold70	subtractBed	intrn	612710	613189	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_L2	612710	613189	51	+	.	.
scaffold70	subtractBed	intrn	612794	613168	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_RTE-X	612794	613168	80	+	.	.
scaffold70	subtractBed	intrn	612953	613387	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_RTE-X	612953	613387	40	+	.	.
scaffold70	subtractBed	intrn	611888	612049	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_L2	611888	612049	28	+	.	.
scaffold70	subtractBed	intrn	611424	611684	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_RTE-X	611424	611684	41	+	.	.
scaffold70	subtractBed	intrn	612899	613273	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_L2	612899	613273	42	+	.	.
scaffold70	subtractBed	intrn	611466	611684	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_RTE-X	611466	611684	66	+	.	.
scaffold70	subtractBed	intrn	612920	613168	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_L1-Tx1	612920	613168	90	+	.	.
scaffold70	subtractBed	intrn	612685	612807	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_L2	612685	612807	25	+	.	.
scaffold70	subtractBed	intrn	610017	610199	.	-	.	Parent=CGI_10024778;
	scaffold70	WUBlastX	LINE_RTE-X	610017	610199	24	+	.	.
scaffold70	subtractBed	intrn	616988	617037	.	-	.	Parent=CGI_10024778;
	scaffold70	TRF	Tandem_Repeat	616988	617037	84	+	.	.
scaffold70	subtractBed	intrn	617477	617625	.	-	.	Parent=CGI_10024778;
	scaffold70	TRF	Tandem_Repeat	617477	617625	280	+	.	.
scaffold70	subtractBed	intrn	646443	646740	.	+	.	Parent=CGI_10024781;
	scaffold70	TRF	Tandem_Repeat	646430	646740	321	+	.	.
scaffold70	subtractBed	intrn	663545	664230	.	+	.	Parent=CGI_10024783;
	scaffold70	TRF	Tandem_Repeat	663545	664230	939	+	.	.
scaffold70	subtractBed	intrn	679558	679988	.	+	.	Parent=CGI_10024786;
	scaffold70	TRF	Tandem_Repeat	679558	679988	413	+	.	.
scaffold70	subtractBed	intrn	682396	683049	.	+	.	Parent=CGI_10024786;
	scaffold70	TRF	Tandem_Repeat	682396	683049	635	+	.	.
scaffold70	subtractBed	intrn	691818	691952	.	-	.	Parent=CGI_10024788;
	scaffold70	WUBlastX	LINE_RTE-BovB	691818	691952	32	+	.	.
scaffold70	subtractBed	intrn	697162	697559	.	-	.	Parent=CGI_10024788;
	scaffold70	TRF	Tandem_Repeat	697162	697559	615	+	.	.
scaffold70	subtractBed	intrn	698751	698800	.	-	.	Parent=CGI_10024788;
	scaffold70	TRF	Tandem_Repeat	698751	698800	100	+	.	.
scaffold70	subtractBed	intrn	701726	701935	.	-	.	Parent=CGI_10024788;
	scaffold70	WUBlastX	DNA_TcMar-Tc1	701726	701935	143	-	.	.
scaffold70	subtractBed	intrn	701932	702462	.	-	.	Parent=CGI_10024788;
	scaffold70	WUBlastX	DNA_TcMar-Tc1	701932	702462	223	-	.	.
scaffold70	subtractBed	intrn	701932	702669	.	-	.	Parent=CGI_10024788;
	scaffold70	WUBlastX	DNA_TcMar-Tc1	701932	702669	92	-	.	.
scaffold70	subtractBed	intrn	769461	770877	.	-	.	Parent=CGI_10024790;
	scaffold70	TRF	Tandem_Repeat	769461	770904	2215	+	.	.
scaffold70	subtractBed	intrn	772498	772529	.	-	.	Parent=CGI_10024790;
	scaffold70	TRF	Tandem_Repeat	772498	772529	55	+	.	.
scaffold70	subtractBed	intrn	781092	781130	.	-	.	Parent=CGI_10024790;
	scaffold70	TRF	Tandem_Repeat	781092	781130	78	+	.	.
scaffold70	subtractBed	intrn	783179	783367	.	-	.	Parent=CGI_10024790;
	scaffold70	TRF	Tandem_Repeat	783179	783367	65	+	.	.
scaffold70	subtractBed	intrn	815131	816151	.	+	.	Parent=CGI_10024793;
	scaffold70	TRF	Tandem_Repeat	815110	816151	1252	+	.	.
scaffold70	subtractBed	intrn	815131	816151	.	+	.	Parent=CGI_10024793;
	scaffold70	TRF	Tandem_Repeat	815110	816151	1501	+	.	.
scaffold70	subtractBed	intrn	815131	816151	.	+	.	Parent=CGI_10024793;
	scaffold70	TRF	Tandem_Repeat	815110	816151	1499	+	.	.
scaffold70	subtractBed	intrn	823959	824014	.	-	.	Parent=CGI_10024794;
	scaffold70	TRF	Tandem_Repeat	823959	824014	76	+	.	.
scaffold70	subtractBed	intrn	832059	832655	.	+	.	Parent=CGI_10024795;
	scaffold70	TRF	Tandem_Repeat	832059	832655	482	+	.	.
scaffold70	subtractBed	intrn	832099	832621	.	+	.	Parent=CGI_10024795;
	scaffold70	TRF	Tandem_Repeat	832099	832621	393	+	.	.
scaffold70	subtractBed	intrn	832099	832655	.	+	.	Parent=CGI_10024795;
	scaffold70	TRF	Tandem_Repeat	832099	832655	463	+	.	.
scaffold70	subtractBed	intrn	893509	894475	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	893509	894475	804	+	.	.
scaffold70	subtractBed	intrn	893509	894474	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	893509	894474	997	+	.	.
scaffold70	subtractBed	intrn	893504	894473	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	893504	894473	1021	+	.	.
scaffold70	subtractBed	intrn	894379	894490	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	894379	894490	86	+	.	.
scaffold70	subtractBed	intrn	900616	900830	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	900616	900830	364	+	.	.
scaffold70	subtractBed	intrn	903008	903778	.	+	.	Parent=CGI_10024801;
	scaffold70	TRF	Tandem_Repeat	903008	903778	1368	+	.	.
scaffold70	subtractBed	intrn	915778	915974	.	+	.	Parent=CGI_10024802;
	scaffold70	TRF	Tandem_Repeat	915778	915974	286	+	.	.
scaffold70	subtractBed	intrn	944075	944123	.	+	.	Parent=CGI_10024805;
	scaffold70	TRF	Tandem_Repeat	944075	944123	98	+	.	.
scaffold70	subtractBed	intrn	950675	950713	.	+	.	Parent=CGI_10024805;
	scaffold70	TRF	Tandem_Repeat	950675	950713	51	+	.	.
scaffold700	subtractBed	intrn	95685	95733	.	-	.	Parent=CGI_10006011;
	scaffold700	TRF	Tandem_Repeat	95685	95733	98	+	.	.
scaffold700	subtractBed	intrn	99214	99916	.	-	.	Parent=CGI_10006011;
	scaffold700	TRF	Tandem_Repeat	99214	99916	585	+	.	.
scaffold700	subtractBed	intrn	99341	99913	.	-	.	Parent=CGI_10006011;
	scaffold700	TRF	Tandem_Repeat	99341	99913	713	+	.	.
scaffold700	subtractBed	intrn	99355	99910	.	-	.	Parent=CGI_10006011;
	scaffold700	TRF	Tandem_Repeat	99355	99910	785	+	.	.
scaffold700	subtractBed	intrn	102476	102888	.	-	.	Parent=CGI_10006011;
	scaffold700	TRF	Tandem_Repeat	102476	102888	718	+	.	.
scaffold705	subtractBed	intrn	28925	28961	.	+	.	Parent=CGI_10015494;
	scaffold705	TRF	Tandem_Repeat	28925	28961	74	+	.	.
scaffold705	subtractBed	intrn	36276	36330	.	-	.	Parent=CGI_10015495;
	scaffold705	TRF	Tandem_Repeat	36276	36330	110	+	.	.
scaffold705	subtractBed	intrn	39715	39790	.	-	.	Parent=CGI_10015495;
	scaffold705	TRF	Tandem_Repeat	39715	39790	134	+	.	.
scaffold705	subtractBed	intrn	56843	56971	.	-	.	Parent=CGI_10015497;
	scaffold705	WUBlastX	LINE_RTE-BovB	56843	56971	28	+	.	.
scaffold705	subtractBed	intrn	59855	60289	.	-	.	Parent=CGI_10015497;
	scaffold705	WUBlastX	LINE_Penelope	59855	60289	120	+	.	.
scaffold705	subtractBed	intrn	59260	59949	.	-	.	Parent=CGI_10015497;
	scaffold705	WUBlastX	LINE_Penelope	59260	59949	373	+	.	.
scaffold705	subtractBed	intrn	76275	76350	.	-	.	Parent=CGI_10015497;
	scaffold705	TRF	Tandem_Repeat	76275	76350	71	+	.	.
scaffold705	subtractBed	intrn	76277	76370	.	-	.	Parent=CGI_10015497;
	scaffold705	TRF	Tandem_Repeat	76277	76370	61	+	.	.
scaffold705	subtractBed	intrn	80754	81036	.	-	.	Parent=CGI_10015498;
	scaffold705	TRF	Tandem_Repeat	80754	81036	397	+	.	.
scaffold705	subtractBed	intrn	94049	94279	.	+	.	Parent=CGI_10015500;
	scaffold705	WUBlastX	DNA_TcMar-Tc1	94049	94279	138	-	.	.
scaffold705	subtractBed	intrn	94294	94770	.	+	.	Parent=CGI_10015500;
	scaffold705	WUBlastX	DNA_TcMar-Tc1	94294	94770	241	-	.	.
scaffold705	subtractBed	intrn	127641	127687	.	+	.	Parent=CGI_10015501;
	scaffold705	TRF	Tandem_Repeat	127641	127687	51	+	.	.
scaffold705	subtractBed	intrn	142023	142084	.	+	.	Parent=CGI_10015501;
	scaffold705	TRF	Tandem_Repeat	142023	142084	83	+	.	.
scaffold705	subtractBed	intrn	142015	142074	.	+	.	Parent=CGI_10015501;
	scaffold705	TRF	Tandem_Repeat	142015	142074	97	+	.	.
scaffold705	subtractBed	intrn	204657	205027	.	-	.	Parent=CGI_10015506;
	scaffold705	TRF	Tandem_Repeat	204657	205027	534	+	.	.
scaffold705	subtractBed	intrn	215186	215217	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	215186	215217	64	+	.	.
scaffold705	subtractBed	intrn	215622	215796	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	215622	215796	118	+	.	.
scaffold705	subtractBed	intrn	219763	220099	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	219763	220099	350	+	.	.
scaffold705	subtractBed	intrn	219741	220099	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	219741	220099	438	+	.	.
scaffold705	subtractBed	intrn	220770	220966	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	220770	220966	252	+	.	.
scaffold705	subtractBed	intrn	220801	220989	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	220801	220989	168	+	.	.
scaffold705	subtractBed	intrn	224332	224413	.	-	.	Parent=CGI_10015507;
	scaffold705	TRF	Tandem_Repeat	224332	224413	110	+	.	.
scaffold705	subtractBed	intrn	266827	267594	.	+	.	Parent=CGI_10015510;
	scaffold705	WUBlastX	LINE_RTE-X	266827	267594	124	+	.	.
scaffold705	subtractBed	intrn	317815	317861	.	-	.	Parent=CGI_10015515;
	scaffold705	TRF	Tandem_Repeat	317815	317861	94	+	.	.
scaffold705	subtractBed	intrn	327872	327894	.	+	.	Parent=CGI_10015516;
	scaffold705	WUBlastX	DNA_IS4EU	327478	327894	71	+	.	.
scaffold705	subtractBed	intrn	327872	327897	.	+	.	Parent=CGI_10015516;
	scaffold705	WUBlastX	DNA_IS4EU	327127	327897	31	+	.	.
scaffold705	subtractBed	intrn	343732	343781	.	+	.	Parent=CGI_10015517;
	scaffold705	TRF	Tandem_Repeat	343732	343781	100	+	.	.
scaffold705	subtractBed	intrn	345612	345767	.	+	.	Parent=CGI_10015517;
	scaffold705	WUBlastX	LINE_Penelope	345612	345767	52	-	.	.
scaffold705	subtractBed	intrn	344995	345267	.	+	.	Parent=CGI_10015517;
	scaffold705	WUBlastX	LINE_Penelope	344995	345267	56	-	.	.
scaffold705	subtractBed	intrn	344915	344984	.	+	.	Parent=CGI_10015517;
	scaffold705	WUBlastX	LINE_Penelope	344892	344984	27	-	.	.
scaffold705	subtractBed	intrn	344915	344951	.	+	.	Parent=CGI_10015517;
	scaffold705	WUBlastX	LINE_Penelope	344889	344951	34	-	.	.
scaffold705	subtractBed	intrn	345474	345770	.	+	.	Parent=CGI_10015517;
	scaffold705	WUBlastX	LINE_Penelope	345474	345770	29	-	.	.
scaffold705	subtractBed	intrn	404780	405907	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_Kolobok-IS4	404780	405907	551	-	.	.
scaffold705	subtractBed	intrn	401559	402071	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_Kolobok-IS4	401559	402071	78	+	.	.
scaffold705	subtractBed	intrn	403096	403779	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_IS4EU	403096	403779	164	+	.	.
scaffold705	subtractBed	intrn	401709	402068	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_IS4EU	401709	402068	95	+	.	.
scaffold705	subtractBed	intrn	402700	403773	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_Kolobok-IS4	402700	403773	133	+	.	.
scaffold705	subtractBed	intrn	406672	406959	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_IS4EU	406672	406959	27	-	.	.
scaffold705	subtractBed	intrn	406639	406899	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	DNA_Kolobok-IS4	406639	406899	46	-	.	.
scaffold705	subtractBed	intrn	407098	409239	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	LINE_L1-Tx1	407098	409239	1092	+	.	.
scaffold705	subtractBed	intrn	410727	410762	.	-	.	Parent=CGI_10015520;
	scaffold705	TRF	Tandem_Repeat	410727	410762	72	+	.	.
scaffold705	subtractBed	intrn	409791	410612	.	-	.	Parent=CGI_10015520;
	scaffold705	WUBlastX	LINE_L1-Tx1	409791	410612	85	+	.	.
scaffold705	subtractBed	intrn	414740	415051	.	-	.	Parent=CGI_10015520;
	scaffold705	TRF	Tandem_Repeat	414740	415051	419	+	.	.
scaffold705	subtractBed	intrn	418316	418376	.	-	.	Parent=CGI_10015520;
	scaffold705	TRF	Tandem_Repeat	418316	418376	95	+	.	.
scaffold707	subtractBed	intrn	40871	41041	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	LTR_Gypsy	40871	41041	125	-	.	.
scaffold707	subtractBed	intrn	37243	37593	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Sola	37243	37593	90	+	.	.
scaffold707	subtractBed	intrn	37267	37560	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Sola	37267	37560	96	+	.	.
scaffold707	subtractBed	intrn	40844	41017	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	LTR_Gypsy	40844	41017	109	-	.	.
scaffold707	subtractBed	intrn	43628	43631	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	43628	43801	52	+	.	.
scaffold707	subtractBed	intrn	43779	43801	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	43628	43801	52	+	.	.
scaffold707	subtractBed	intrn	48251	48412	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	48251	48412	40	-	.	.
scaffold707	subtractBed	intrn	47451	47711	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	47451	47711	102	-	.	.
scaffold707	subtractBed	intrn	48493	48606	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	48493	48606	110	-	.	.
scaffold707	subtractBed	intrn	48490	48645	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	48490	48645	72	-	.	.
scaffold707	subtractBed	intrn	48230	48385	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	48230	48385	79	-	.	.
scaffold707	subtractBed	intrn	47981	48094	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	47981	48094	61	-	.	.
scaffold707	subtractBed	intrn	49201	49659	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	49201	49659	107	-	.	.
scaffold707	subtractBed	intrn	49261	49629	.	+	.	Parent=CGI_10007721;
	scaffold707	WUBlastX	DNA_Harbinger	49261	49629	157	-	.	.
scaffold707	subtractBed	intrn	113150	113716	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	113150	113716	526	+	.	.
scaffold707	subtractBed	intrn	113150	113716	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	113150	113716	634	+	.	.
scaffold707	subtractBed	intrn	118435	118472	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	118435	118472	76	+	.	.
scaffold707	subtractBed	intrn	118588	118630	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	118588	118630	59	+	.	.
scaffold707	subtractBed	intrn	127244	127765	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	127244	127765	614	+	.	.
scaffold707	subtractBed	intrn	129094	129166	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129094	129166	146	+	.	.
scaffold707	subtractBed	intrn	129211	129254	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129211	129254	88	+	.	.
scaffold707	subtractBed	intrn	129958	130693	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129958	130693	836	+	.	.
scaffold707	subtractBed	intrn	129956	130836	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129956	130836	1045	+	.	.
scaffold707	subtractBed	intrn	129956	130859	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129956	130859	1227	+	.	.
scaffold707	subtractBed	intrn	130696	130836	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	130696	130836	210	+	.	.
scaffold707	subtractBed	intrn	129958	130836	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	129958	130836	1023	+	.	.
scaffold707	subtractBed	intrn	130696	130859	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	130696	130859	202	+	.	.
scaffold707	subtractBed	intrn	130899	131006	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	130899	131006	116	+	.	.
scaffold707	subtractBed	intrn	132795	132897	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	132795	132897	50	+	.	.
scaffold707	subtractBed	intrn	132795	132897	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	132795	132897	98	+	.	.
scaffold707	subtractBed	intrn	133833	133892	.	-	.	Parent=CGI_10007724;
	scaffold707	TRF	Tandem_Repeat	133833	133892	120	+	.	.
scaffold707	subtractBed	intrn	148030	148068	.	+	.	Parent=CGI_10007725;
	scaffold707	TRF	Tandem_Repeat	148030	148068	69	+	.	.
scaffold707	subtractBed	intrn	148393	148394	.	+	.	Parent=CGI_10007725;
	scaffold707	WUBlastX	LTR_Gypsy	148260	148394	39	+	.	.
scaffold707	subtractBed	intrn	162232	162452	.	-	.	Parent=CGI_10007726;
	scaffold707	TRF	Tandem_Repeat	162232	162452	200	+	.	.
scaffold707	subtractBed	intrn	170586	170868	.	-	.	Parent=CGI_10007726;
	scaffold707	TRF	Tandem_Repeat	170586	170868	381	+	.	.
scaffold707	subtractBed	intrn	170586	170866	.	-	.	Parent=CGI_10007726;
	scaffold707	TRF	Tandem_Repeat	170586	170866	433	+	.	.
scaffold707	subtractBed	intrn	171243	171284	.	-	.	Parent=CGI_10007726;
	scaffold707	TRF	Tandem_Repeat	171243	171284	66	+	.	.
scaffold709	subtractBed	intrn	9112	9174	.	+	.	Parent=CGI_10020075;
	scaffold709	TRF	Tandem_Repeat	9112	9174	65	+	.	.
scaffold709	subtractBed	intrn	13136	13233	.	+	.	Parent=CGI_10020076;
	scaffold709	TRF	Tandem_Repeat	13136	13233	90	+	.	.
scaffold709	subtractBed	intrn	18719	18806	.	+	.	Parent=CGI_10020077;
	scaffold709	TRF	Tandem_Repeat	18719	18806	59	+	.	.
scaffold709	subtractBed	intrn	20278	20334	.	+	.	Parent=CGI_10020077;
	scaffold709	TRF	Tandem_Repeat	20278	20334	114	+	.	.
scaffold709	subtractBed	intrn	47107	47145	.	+	.	Parent=CGI_10020079;
	scaffold709	TRF	Tandem_Repeat	47107	47145	78	+	.	.
scaffold709	subtractBed	intrn	180899	180948	.	+	.	Parent=CGI_10020084;
	scaffold709	TRF	Tandem_Repeat	180899	180948	59	+	.	.
scaffold709	subtractBed	intrn	221819	221843	.	-	.	Parent=CGI_10020088;
	scaffold709	TRF	Tandem_Repeat	221819	221843	50	+	.	.
scaffold709	subtractBed	intrn	222435	222476	.	-	.	Parent=CGI_10020088;
	scaffold709	TRF	Tandem_Repeat	222435	222476	52	+	.	.
scaffold709	subtractBed	intrn	315030	315245	.	+	.	Parent=CGI_10020089;
	scaffold709	WUBlastX	LINE_RTE-X	315030	315245	35	+	.	.
scaffold709	subtractBed	intrn	314550	315197	.	+	.	Parent=CGI_10020089;
	scaffold709	WUBlastX	LINE_RTE-X	314550	315197	69	+	.	.
scaffold709	subtractBed	intrn	315519	315611	.	+	.	Parent=CGI_10020089;
	scaffold709	WUBlastX	LINE_RTE-X	315519	315611	24	+	.	.
scaffold709	subtractBed	intrn	315586	315678	.	+	.	Parent=CGI_10020089;
	scaffold709	WUBlastX	LINE_RTE-X	315586	315678	25	+	.	.
scaffold709	subtractBed	intrn	407509	407624	.	-	.	Parent=CGI_10020090;
	scaffold709	TRF	Tandem_Repeat	407509	407624	86	+	.	.
scaffold709	subtractBed	intrn	407514	407625	.	-	.	Parent=CGI_10020090;
	scaffold709	TRF	Tandem_Repeat	407514	407625	104	+	.	.
scaffold709	subtractBed	intrn	407509	407632	.	-	.	Parent=CGI_10020090;
	scaffold709	TRF	Tandem_Repeat	407509	407632	84	+	.	.
scaffold709	subtractBed	intrn	407546	407618	.	-	.	Parent=CGI_10020090;
	scaffold709	TRF	Tandem_Repeat	407546	407618	75	+	.	.
scaffold709	subtractBed	intrn	407515	407623	.	-	.	Parent=CGI_10020090;
	scaffold709	TRF	Tandem_Repeat	407515	407623	66	+	.	.
scaffold709	subtractBed	intrn	412063	412790	.	+	.	Parent=CGI_10020092;
	scaffold709	TRF	Tandem_Repeat	412063	412790	956	+	.	.
scaffold709	subtractBed	intrn	412063	412790	.	-	.	Parent=CGI_10020093;
	scaffold709	TRF	Tandem_Repeat	412063	412790	956	+	.	.
scaffold709	subtractBed	intrn	435717	436016	.	-	.	Parent=CGI_10020094;
	scaffold709	TRF	Tandem_Repeat	435683	436016	230	+	.	.
scaffold71	subtractBed	intrn	99505	99583	.	+	.	Parent=CGI_10015053;
	scaffold71	TRF	Tandem_Repeat	99505	99583	158	+	.	.
scaffold71	subtractBed	intrn	111769	112127	.	+	.	Parent=CGI_10015053;
	scaffold71	TRF	Tandem_Repeat	111763	112127	395	+	.	.
scaffold71	subtractBed	intrn	128385	128720	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	128385	128761	533	+	.	.
scaffold71	subtractBed	intrn	140037	141128	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	140037	141128	1094	+	.	.
scaffold71	subtractBed	intrn	142765	142798	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	142765	142798	68	+	.	.
scaffold71	subtractBed	intrn	150393	150563	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	150389	150563	181	+	.	.
scaffold71	subtractBed	intrn	150393	151064	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	150378	151064	372	+	.	.
scaffold71	subtractBed	intrn	150414	150717	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	150414	150717	249	+	.	.
scaffold71	subtractBed	intrn	150796	150985	.	+	.	Parent=CGI_10015056;
	scaffold71	TRF	Tandem_Repeat	150796	150985	164	+	.	.
scaffold71	subtractBed	intrn	270763	272100	.	+	.	Parent=CGI_10015059;
	scaffold71	WUBlastX	LTR_Ngaro	270763	272100	765	+	.	.
scaffold71	subtractBed	intrn	272087	272968	.	+	.	Parent=CGI_10015059;
	scaffold71	WUBlastX	LTR_Ngaro	272087	272968	243	+	.	.
scaffold71	subtractBed	intrn	270517	272028	.	+	.	Parent=CGI_10015059;
	scaffold71	WUBlastX	LTR_Ngaro	270517	272028	431	+	.	.
scaffold71	subtractBed	intrn	272141	272872	.	+	.	Parent=CGI_10015059;
	scaffold71	WUBlastX	LTR_Ngaro	272141	272872	269	+	.	.
scaffold71	subtractBed	intrn	269831	269959	.	+	.	Parent=CGI_10015059;
	scaffold71	WUBlastX	LTR_Gypsy	269831	269959	24	+	.	.
scaffold71	subtractBed	intrn	311969	312011	.	+	.	Parent=CGI_10015060;
	scaffold71	TRF	Tandem_Repeat	311969	312011	68	+	.	.
scaffold71	subtractBed	intrn	325832	326806	.	-	.	Parent=CGI_10015061;
	scaffold71	TRF	Tandem_Repeat	325832	326806	1797	+	.	.
scaffold71	subtractBed	intrn	330182	330417	.	-	.	Parent=CGI_10015061;
	scaffold71	TRF	Tandem_Repeat	330182	330417	382	+	.	.
scaffold71	subtractBed	intrn	333056	333098	.	-	.	Parent=CGI_10015061;
	scaffold71	TRF	Tandem_Repeat	333056	333098	86	+	.	.
scaffold71	subtractBed	intrn	353138	353277	.	+	.	Parent=CGI_10015062;
	scaffold71	TRF	Tandem_Repeat	353122	353277	204	+	.	.
scaffold71	subtractBed	intrn	358389	358515	.	+	.	Parent=CGI_10015062;
	scaffold71	TRF	Tandem_Repeat	358389	358515	227	+	.	.
scaffold71	subtractBed	intrn	364462	364506	.	-	.	Parent=CGI_10015063;
	scaffold71	TRF	Tandem_Repeat	364462	364506	90	+	.	.
scaffold71	subtractBed	intrn	366311	366365	.	-	.	Parent=CGI_10015063;
	scaffold71	TRF	Tandem_Repeat	366311	366365	110	+	.	.
scaffold71	subtractBed	intrn	364462	364506	.	+	.	Parent=CGI_10015064;
	scaffold71	TRF	Tandem_Repeat	364462	364506	90	+	.	.
scaffold71	subtractBed	intrn	366311	366365	.	+	.	Parent=CGI_10015064;
	scaffold71	TRF	Tandem_Repeat	366311	366365	110	+	.	.
scaffold71	subtractBed	intrn	378325	378382	.	-	.	Parent=CGI_10015066;
	scaffold71	TRF	Tandem_Repeat	378325	378382	116	+	.	.
scaffold71	subtractBed	intrn	383010	383061	.	-	.	Parent=CGI_10015066;
	scaffold71	TRF	Tandem_Repeat	383010	383061	104	+	.	.
scaffold71	subtractBed	intrn	378325	378382	.	+	.	Parent=CGI_10015067;
	scaffold71	TRF	Tandem_Repeat	378325	378382	116	+	.	.
scaffold711	subtractBed	intrn	214492	214536	.	+	.	Parent=CGI_10009503;
	scaffold711	TRF	Tandem_Repeat	214492	214536	90	+	.	.
scaffold711	subtractBed	intrn	215387	215431	.	+	.	Parent=CGI_10009503;
	scaffold711	TRF	Tandem_Repeat	215387	215431	90	+	.	.
scaffold712	subtractBed	intrn	6285	7751	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	6285	7751	720	+	.	.
scaffold712	subtractBed	intrn	6452	7752	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	6452	7752	1773	+	.	.
scaffold712	subtractBed	intrn	8834	9602	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	8834	9602	778	+	.	.
scaffold712	subtractBed	intrn	8836	9602	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	8836	9602	943	+	.	.
scaffold712	subtractBed	intrn	8834	9593	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	8834	9593	958	+	.	.
scaffold712	subtractBed	intrn	8835	9593	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	8835	9593	911	+	.	.
scaffold712	subtractBed	intrn	9331	9421	.	-	.	Parent=CGI_10016469;
	scaffold712	TRF	Tandem_Repeat	9331	9421	74	+	.	.
scaffold712	subtractBed	intrn	16897	17103	.	+	.	Parent=CGI_10016470;
	scaffold712	TRF	Tandem_Repeat	16897	17103	265	+	.	.
scaffold712	subtractBed	intrn	16897	17162	.	+	.	Parent=CGI_10016470;
	scaffold712	TRF	Tandem_Repeat	16897	17162	274	+	.	.
scaffold712	subtractBed	intrn	16897	17162	.	+	.	Parent=CGI_10016470;
	scaffold712	TRF	Tandem_Repeat	16897	17162	320	+	.	.
scaffold712	subtractBed	intrn	22699	22960	.	+	.	Parent=CGI_10016470;
	scaffold712	TRF	Tandem_Repeat	22699	22960	461	+	.	.
scaffold712	subtractBed	intrn	22699	22960	.	-	.	Parent=CGI_10016472;
	scaffold712	TRF	Tandem_Repeat	22699	22960	461	+	.	.
scaffold712	subtractBed	intrn	52405	52437	.	+	.	Parent=CGI_10016474;
	scaffold712	TRF	Tandem_Repeat	52405	52437	66	+	.	.
scaffold712	subtractBed	intrn	65025	65070	.	-	.	Parent=CGI_10016475;
	scaffold712	TRF	Tandem_Repeat	65025	65070	92	+	.	.
scaffold712	subtractBed	intrn	151940	151974	.	+	.	Parent=CGI_10016478;
	scaffold712	TRF	Tandem_Repeat	151940	151974	61	+	.	.
scaffold712	subtractBed	intrn	152593	152640	.	+	.	Parent=CGI_10016478;
	scaffold712	TRF	Tandem_Repeat	152593	152640	60	+	.	.
scaffold712	subtractBed	intrn	153983	155566	.	+	.	Parent=CGI_10016478;
	scaffold712	WUBlastX	LINE_L1	153983	155566	315	-	.	.
scaffold712	subtractBed	intrn	153728	154975	.	+	.	Parent=CGI_10016478;
	scaffold712	WUBlastX	LINE_L1	153728	154975	289	-	.	.
scaffold712	subtractBed	intrn	152784	153791	.	+	.	Parent=CGI_10016478;
	scaffold712	WUBlastX	LINE_L1-Tx1	152784	153791	120	-	.	.
scaffold712	subtractBed	intrn	153965	155245	.	+	.	Parent=CGI_10016478;
	scaffold712	WUBlastX	LINE_L1-Tx1	153965	155245	504	-	.	.
scaffold712	subtractBed	intrn	155787	155869	.	+	.	Parent=CGI_10016478;
	scaffold712	WUBlastX	LINE_Jockey	155787	155897	29	-	.	.
scaffold712	subtractBed	intrn	318514	318671	.	+	.	Parent=CGI_10016482;
	scaffold712	TRF	Tandem_Repeat	318514	318671	149	+	.	.
scaffold712	subtractBed	intrn	329599	329825	.	+	.	Parent=CGI_10016483;
	scaffold712	TRF	Tandem_Repeat	329599	329825	192	+	.	.
scaffold712	subtractBed	intrn	338837	338904	.	+	.	Parent=CGI_10016485;
	scaffold712	TRF	Tandem_Repeat	338837	338904	136	+	.	.
scaffold712	subtractBed	intrn	343073	343858	.	+	.	Parent=CGI_10016485;
	scaffold712	WUBlastX	LINE_R2-Hero	343073	343858	130	+	.	.
scaffold712	subtractBed	intrn	345841	345874	.	+	.	Parent=CGI_10016485;
	scaffold712	TRF	Tandem_Repeat	345841	345874	59	+	.	.
scaffold712	subtractBed	intrn	344996	345343	.	+	.	Parent=CGI_10016485;
	scaffold712	WUBlastX	LINE_R2-Hero	344996	345343	245	+	.	.
scaffold712	subtractBed	intrn	345475	346533	.	+	.	Parent=CGI_10016485;
	scaffold712	WUBlastX	LINE_R2-Hero	345475	346533	289	+	.	.
scaffold712	subtractBed	intrn	345336	345470	.	+	.	Parent=CGI_10016485;
	scaffold712	WUBlastX	LINE_R2-Hero	345336	345470	61	+	.	.
scaffold712	subtractBed	intrn	343404	344411	.	+	.	Parent=CGI_10016485;
	scaffold712	WUBlastX	LINE_R2-Hero	343404	344411	499	+	.	.
scaffold712	subtractBed	intrn	411879	411934	.	-	.	Parent=CGI_10016489;
	scaffold712	TRF	Tandem_Repeat	411879	411934	76	+	.	.
scaffold712	subtractBed	intrn	426553	426604	.	-	.	Parent=CGI_10016489;
	scaffold712	TRF	Tandem_Repeat	426553	426604	52	+	.	.
scaffold712	subtractBed	intrn	429117	429146	.	-	.	Parent=CGI_10016489;
	scaffold712	TRF	Tandem_Repeat	429117	429146	60	+	.	.
scaffold712	subtractBed	intrn	436818	437261	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	LINE_CR1	436818	437261	251	+	.	.
scaffold712	subtractBed	intrn	436833	437345	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	LINE_CR1-L2	436833	437345	81	+	.	.
scaffold712	subtractBed	intrn	436650	437264	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	LINE_CR1	436650	437264	218	+	.	.
scaffold712	subtractBed	intrn	440552	441142	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	DNA_TcMar-Tc1	440552	441142	134	-	.	.
scaffold712	subtractBed	intrn	440753	441223	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	DNA_TcMar-Tc1	440753	441223	62	-	.	.
scaffold712	subtractBed	intrn	440729	441148	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	DNA_TcMar-Tc1	440729	441148	160	-	.	.
scaffold712	subtractBed	intrn	444688	444933	.	-	.	Parent=CGI_10016489;
	scaffold712	WUBlastX	DNA_TcMar-Tc1	444688	444933	83	-	.	.
scaffold713	subtractBed	intrn	70058	70088	.	+	.	Parent=CGI_10017737;
	scaffold713	TRF	Tandem_Repeat	70058	70088	53	+	.	.
scaffold713	subtractBed	intrn	70281	71203	.	+	.	Parent=CGI_10017737;
	scaffold713	TRF	Tandem_Repeat	70281	71203	1232	+	.	.
scaffold713	subtractBed	intrn	73112	74521	.	+	.	Parent=CGI_10017737;
	scaffold713	TRF	Tandem_Repeat	73112	74521	1604	+	.	.
scaffold713	subtractBed	intrn	73445	74587	.	+	.	Parent=CGI_10017737;
	scaffold713	TRF	Tandem_Repeat	73445	74587	1190	+	.	.
scaffold713	subtractBed	intrn	101324	101359	.	+	.	Parent=CGI_10017740;
	scaffold713	TRF	Tandem_Repeat	101324	101359	63	+	.	.
scaffold713	subtractBed	intrn	117541	117585	.	-	.	Parent=CGI_10017741;
	scaffold713	TRF	Tandem_Repeat	117541	117585	90	+	.	.
scaffold713	subtractBed	intrn	227027	227230	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	227027	227230	311	+	.	.
scaffold713	subtractBed	intrn	229377	229804	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	229377	229804	372	+	.	.
scaffold713	subtractBed	intrn	229396	229590	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	229396	229590	54	+	.	.
scaffold713	subtractBed	intrn	229609	230011	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	229609	230011	214	+	.	.
scaffold713	subtractBed	intrn	229519	230011	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	229519	230011	225	+	.	.
scaffold713	subtractBed	intrn	229798	230011	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	229798	230011	322	+	.	.
scaffold713	subtractBed	intrn	244897	244965	.	-	.	Parent=CGI_10017746;
	scaffold713	TRF	Tandem_Repeat	244897	244965	111	+	.	.
scaffold713	subtractBed	intrn	281050	281337	.	-	.	Parent=CGI_10017750;
	scaffold713	TRF	Tandem_Repeat	281050	281337	451	+	.	.
scaffold713	subtractBed	intrn	396852	396920	.	-	.	Parent=CGI_10017760;
	scaffold713	TRF	Tandem_Repeat	396852	396920	57	+	.	.
scaffold713	subtractBed	intrn	398734	398798	.	-	.	Parent=CGI_10017760;
	scaffold713	TRF	Tandem_Repeat	398734	398798	130	+	.	.
scaffold713	subtractBed	intrn	399406	399471	.	-	.	Parent=CGI_10017760;
	scaffold713	TRF	Tandem_Repeat	399406	399471	69	+	.	.
scaffold713	subtractBed	intrn	399353	399471	.	-	.	Parent=CGI_10017760;
	scaffold713	TRF	Tandem_Repeat	399353	399471	102	+	.	.
scaffold713	subtractBed	intrn	399490	399534	.	-	.	Parent=CGI_10017760;
	scaffold713	TRF	Tandem_Repeat	399490	399534	72	+	.	.
scaffold713	subtractBed	intrn	405655	405918	.	-	.	Parent=CGI_10017760;
	scaffold713	WUBlastX	LINE_CR1-L2	405655	405918	35	-	.	.
scaffold713	subtractBed	intrn	452463	452639	.	-	.	Parent=CGI_10017762;
	scaffold713	WUBlastX	LINE_RTE-X	452463	452639	86	+	.	.
scaffold713	subtractBed	intrn	452460	452756	.	-	.	Parent=CGI_10017762;
	scaffold713	WUBlastX	LINE_RTE-X	452460	452756	72	+	.	.
scaffold713	subtractBed	intrn	466699	466945	.	+	.	Parent=CGI_10017763;
	scaffold713	TRF	Tandem_Repeat	466699	466945	381	+	.	.
scaffold713	subtractBed	intrn	493715	493813	.	+	.	Parent=CGI_10017765;
	scaffold713	TRF	Tandem_Repeat	493715	493813	108	+	.	.
scaffold713	subtractBed	intrn	493749	493813	.	+	.	Parent=CGI_10017765;
	scaffold713	TRF	Tandem_Repeat	493749	493813	85	+	.	.
scaffold713	subtractBed	intrn	493715	493816	.	+	.	Parent=CGI_10017765;
	scaffold713	TRF	Tandem_Repeat	493715	493816	78	+	.	.
scaffold713	subtractBed	intrn	493715	493816	.	+	.	Parent=CGI_10017765;
	scaffold713	TRF	Tandem_Repeat	493715	493816	78	+	.	.
scaffold713	subtractBed	intrn	493715	493816	.	+	.	Parent=CGI_10017765;
	scaffold713	TRF	Tandem_Repeat	493715	493816	105	+	.	.
scaffold713	subtractBed	intrn	509916	510065	.	-	.	Parent=CGI_10017766;
	scaffold713	TRF	Tandem_Repeat	509916	510065	162	+	.	.
scaffold713	subtractBed	intrn	510909	511091	.	-	.	Parent=CGI_10017766;
	scaffold713	TRF	Tandem_Repeat	510909	511091	117	+	.	.
scaffold714	subtractBed	intrn	57964	58005	.	+	.	Parent=CGI_10016639;
	scaffold714	TRF	Tandem_Repeat	57964	58005	84	+	.	.
scaffold714	subtractBed	intrn	62500	62532	.	+	.	Parent=CGI_10016639;
	scaffold714	TRF	Tandem_Repeat	62500	62532	57	+	.	.
scaffold714	subtractBed	intrn	77165	77216	.	+	.	Parent=CGI_10016640;
	scaffold714	TRF	Tandem_Repeat	77165	77216	63	+	.	.
scaffold714	subtractBed	intrn	77239	77282	.	+	.	Parent=CGI_10016640;
	scaffold714	TRF	Tandem_Repeat	77239	77282	88	+	.	.
scaffold714	subtractBed	intrn	79272	79311	.	+	.	Parent=CGI_10016640;
	scaffold714	TRF	Tandem_Repeat	79272	79311	80	+	.	.
scaffold714	subtractBed	intrn	83727	83764	.	+	.	Parent=CGI_10016640;
	scaffold714	TRF	Tandem_Repeat	83727	83764	76	+	.	.
scaffold714	subtractBed	intrn	88003	88404	.	+	.	Parent=CGI_10016640;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	88003	88404	187	-	.	.
scaffold714	subtractBed	intrn	88340	88702	.	+	.	Parent=CGI_10016640;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	88340	88702	103	-	.	.
scaffold714	subtractBed	intrn	88707	88901	.	+	.	Parent=CGI_10016640;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	88707	88901	44	-	.	.
scaffold714	subtractBed	intrn	88385	88765	.	+	.	Parent=CGI_10016640;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	88385	88765	78	-	.	.
scaffold714	subtractBed	intrn	87952	88245	.	+	.	Parent=CGI_10016640;
	scaffold714	WUBlastX	DNA_TcMar-Marin	87952	88245	26	-	.	.
scaffold714	subtractBed	intrn	91750	91775	.	+	.	Parent=CGI_10016640;
	scaffold714	TRF	Tandem_Repeat	91750	91775	52	+	.	.
scaffold714	subtractBed	intrn	248414	248509	.	+	.	Parent=CGI_10016643;
	scaffold714	WUBlastX	LINE_RTE-X	248414	248509	37	+	.	.
scaffold714	subtractBed	intrn	256234	256929	.	+	.	Parent=CGI_10016643;
	scaffold714	TRF	Tandem_Repeat	256234	256929	899	+	.	.
scaffold714	subtractBed	intrn	262579	262692	.	+	.	Parent=CGI_10016643;
	scaffold714	TRF	Tandem_Repeat	262579	262692	115	+	.	.
scaffold714	subtractBed	intrn	388969	389046	.	-	.	Parent=CGI_10016647;
	scaffold714	TRF	Tandem_Repeat	388969	389046	61	+	.	.
scaffold714	subtractBed	intrn	392153	392302	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	392153	392302	54	+	.	.
scaffold714	subtractBed	intrn	391465	391905	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	391465	391905	23	+	.	.
scaffold714	subtractBed	intrn	391465	391803	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	391465	391803	37	+	.	.
scaffold714	subtractBed	intrn	392063	392317	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Marin	392063	392317	35	+	.	.
scaffold714	subtractBed	intrn	395416	396125	.	-	.	Parent=CGI_10016647;
	scaffold714	TRF	Tandem_Repeat	395416	396125	1026	+	.	.
scaffold714	subtractBed	intrn	395407	396280	.	-	.	Parent=CGI_10016647;
	scaffold714	TRF	Tandem_Repeat	395407	396280	1131	+	.	.
scaffold714	subtractBed	intrn	396124	396280	.	-	.	Parent=CGI_10016647;
	scaffold714	TRF	Tandem_Repeat	396124	396280	206	+	.	.
scaffold714	subtractBed	intrn	399006	399200	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	399006	399200	60	+	.	.
scaffold714	subtractBed	intrn	398937	399152	.	-	.	Parent=CGI_10016647;
	scaffold714	WUBlastX	DNA_TcMar-Tc1	398937	399152	51	+	.	.
scaffold714	subtractBed	intrn	430603	430701	.	+	.	Parent=CGI_10016648;
	scaffold714	TRF	Tandem_Repeat	430603	430701	108	+	.	.
scaffold714	subtractBed	intrn	432241	432335	.	+	.	Parent=CGI_10016648;
	scaffold714	TRF	Tandem_Repeat	432241	432335	84	+	.	.
scaffold714	subtractBed	intrn	433662	433806	.	+	.	Parent=CGI_10016648;
	scaffold714	TRF	Tandem_Repeat	433662	433806	239	+	.	.
scaffold714	subtractBed	intrn	436824	437551	.	+	.	Parent=CGI_10016648;
	scaffold714	TRF	Tandem_Repeat	436824	437551	180	+	.	.
scaffold715	subtractBed	intrn	8054	8528	.	+	.	Parent=CGI_10006595;
	scaffold715	TRF	Tandem_Repeat	8054	8528	812	+	.	.
scaffold715	subtractBed	intrn	11685	12605	.	+	.	Parent=CGI_10006595;
	scaffold715	TRF	Tandem_Repeat	11685	12605	713	+	.	.
scaffold715	subtractBed	intrn	78767	80389	.	-	.	Parent=CGI_10006598;
	scaffold715	TRF	Tandem_Repeat	78767	80389	1436	+	.	.
scaffold715	subtractBed	intrn	136337	136372	.	+	.	Parent=CGI_10006600;
	scaffold715	TRF	Tandem_Repeat	136337	136372	72	+	.	.
scaffold715	subtractBed	intrn	137576	138537	.	+	.	Parent=CGI_10006600;
	scaffold715	TRF	Tandem_Repeat	137576	138537	1408	+	.	.
scaffold715	subtractBed	intrn	141301	142250	.	+	.	Parent=CGI_10006600;
	scaffold715	TRF	Tandem_Repeat	141301	142250	1119	+	.	.
scaffold716	subtractBed	intrn	63823	63828	.	-	.	Parent=CGI_10014441;
	scaffold716	WUBlastX	DNA_Kolobok-IS4	63823	64248	56	-	.	.
scaffold716	subtractBed	intrn	103404	103577	.	-	.	Parent=CGI_10014443;
	scaffold716	TRF	Tandem_Repeat	103404	103604	402	+	.	.
scaffold716	subtractBed	intrn	160753	160784	.	+	.	Parent=CGI_10014445;
	scaffold716	TRF	Tandem_Repeat	160753	160784	64	+	.	.
scaffold716	subtractBed	intrn	167471	167607	.	+	.	Parent=CGI_10014445;
	scaffold716	TRF	Tandem_Repeat	167471	167607	175	+	.	.
scaffold716	subtractBed	intrn	167471	168196	.	+	.	Parent=CGI_10014445;
	scaffold716	TRF	Tandem_Repeat	167471	168196	551	+	.	.
scaffold716	subtractBed	intrn	167644	168196	.	+	.	Parent=CGI_10014445;
	scaffold716	TRF	Tandem_Repeat	167644	168196	460	+	.	.
scaffold716	subtractBed	intrn	174757	175139	.	-	.	Parent=CGI_10014446;
	scaffold716	TRF	Tandem_Repeat	174757	175139	597	+	.	.
scaffold716	subtractBed	intrn	185596	187276	.	-	.	Parent=CGI_10014446;
	scaffold716	TRF	Tandem_Repeat	185596	187276	2227	+	.	.
scaffold716	subtractBed	intrn	185596	187272	.	-	.	Parent=CGI_10014446;
	scaffold716	TRF	Tandem_Repeat	185596	187272	2506	+	.	.
scaffold716	subtractBed	intrn	185596	187272	.	-	.	Parent=CGI_10014446;
	scaffold716	TRF	Tandem_Repeat	185596	187272	3142	+	.	.
scaffold716	subtractBed	intrn	207820	207877	.	+	.	Parent=CGI_10014447;
	scaffold716	TRF	Tandem_Repeat	207820	207877	82	+	.	.
scaffold716	subtractBed	intrn	212893	212918	.	+	.	Parent=CGI_10014447;
	scaffold716	TRF	Tandem_Repeat	212893	212918	52	+	.	.
scaffold716	subtractBed	intrn	222696	222741	.	-	.	Parent=CGI_10014448;
	scaffold716	TRF	Tandem_Repeat	222696	222741	92	+	.	.
scaffold716	subtractBed	intrn	227628	227678	.	-	.	Parent=CGI_10014448;
	scaffold716	TRF	Tandem_Repeat	227628	227678	102	+	.	.
scaffold716	subtractBed	intrn	331929	332879	.	+	.	Parent=CGI_10014452;
	scaffold716	WUBlastX	LTR_Ngaro	331929	332879	260	+	.	.
scaffold716	subtractBed	intrn	329454	330194	.	+	.	Parent=CGI_10014452;
	scaffold716	WUBlastX	LTR_Ngaro	329454	330194	198	+	.	.
scaffold716	subtractBed	intrn	330445	332019	.	+	.	Parent=CGI_10014452;
	scaffold716	WUBlastX	LTR_Ngaro	330445	332019	1068	+	.	.
scaffold716	subtractBed	intrn	329724	330341	.	+	.	Parent=CGI_10014452;
	scaffold716	WUBlastX	LTR_Ngaro	329724	330341	75	+	.	.
scaffold718	subtractBed	intrn	88371	88412	.	-	.	Parent=CGI_10008418;
	scaffold718	TRF	Tandem_Repeat	88371	88412	68	+	.	.
scaffold718	subtractBed	intrn	89185	89245	.	-	.	Parent=CGI_10008418;
	scaffold718	TRF	Tandem_Repeat	89185	89245	108	+	.	.
scaffold718	subtractBed	intrn	90391	90432	.	-	.	Parent=CGI_10008418;
	scaffold718	TRF	Tandem_Repeat	90391	90432	84	+	.	.
scaffold718	subtractBed	intrn	129052	129088	.	-	.	Parent=CGI_10008421;
	scaffold718	TRF	Tandem_Repeat	129052	129088	67	+	.	.
scaffold718	subtractBed	intrn	150778	150818	.	-	.	Parent=CGI_10008422;
	scaffold718	TRF	Tandem_Repeat	150778	150818	82	+	.	.
scaffold719	subtractBed	intrn	8603	8771	.	+	.	Parent=CGI_10015996;
	scaffold719	TRF	Tandem_Repeat	8603	8771	140	+	.	.
scaffold719	subtractBed	intrn	8783	8875	.	+	.	Parent=CGI_10015996;
	scaffold719	TRF	Tandem_Repeat	8783	8875	96	+	.	.
scaffold719	subtractBed	intrn	79016	79070	.	+	.	Parent=CGI_10016001;
	scaffold719	TRF	Tandem_Repeat	79016	79070	56	+	.	.
scaffold719	subtractBed	intrn	79011	79069	.	+	.	Parent=CGI_10016001;
	scaffold719	TRF	Tandem_Repeat	79011	79069	64	+	.	.
scaffold719	subtractBed	intrn	79006	79070	.	+	.	Parent=CGI_10016001;
	scaffold719	TRF	Tandem_Repeat	79006	79070	76	+	.	.
scaffold719	subtractBed	intrn	170061	170107	.	-	.	Parent=CGI_10016002;
	scaffold719	TRF	Tandem_Repeat	170061	170107	55	+	.	.
scaffold719	subtractBed	intrn	170665	172234	.	-	.	Parent=CGI_10016002;
	scaffold719	TRF	Tandem_Repeat	170665	172234	1415	+	.	.
scaffold719	subtractBed	intrn	169331	169657	.	-	.	Parent=CGI_10016002;
	scaffold719	WUBlastX	LINE_L1-Tx1	169331	169657	23	+	.	.
scaffold719	subtractBed	intrn	352488	352724	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352488	352724	152	+	.	.
scaffold719	subtractBed	intrn	352443	352862	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352443	352862	130	+	.	.
scaffold719	subtractBed	intrn	352263	352724	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352263	352724	128	+	.	.
scaffold719	subtractBed	intrn	352431	352763	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352431	352763	136	+	.	.
scaffold719	subtractBed	intrn	352189	352354	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352022	352354	70	+	.	.
scaffold719	subtractBed	intrn	352494	352769	.	+	.	Parent=CGI_10016008;
	scaffold719	WUBlastX	LTR_Pao	352494	352769	146	+	.	.
scaffold719	subtractBed	intrn	375666	375948	.	+	.	Parent=CGI_10016008;
	scaffold719	TRF	Tandem_Repeat	375666	375948	530	+	.	.
scaffold719	subtractBed	intrn	377827	377875	.	+	.	Parent=CGI_10016008;
	scaffold719	TRF	Tandem_Repeat	377827	377875	98	+	.	.
scaffold719	subtractBed	intrn	386561	386613	.	+	.	Parent=CGI_10016008;
	scaffold719	TRF	Tandem_Repeat	386561	386613	106	+	.	.
scaffold719	subtractBed	intrn	392243	392578	.	+	.	Parent=CGI_10016008;
	scaffold719	TRF	Tandem_Repeat	392243	392578	367	+	.	.
scaffold72	subtractBed	intrn	14443	14490	.	+	.	Parent=CGI_10017833;
	scaffold72	TRF	Tandem_Repeat	14443	14490	60	+	.	.
scaffold72	subtractBed	intrn	34158	34327	.	-	.	Parent=CGI_10017835;
	scaffold72	TRF	Tandem_Repeat	34158	34327	134	+	.	.
scaffold72	subtractBed	intrn	130165	130909	.	+	.	Parent=CGI_10017836;
	scaffold72	TRF	Tandem_Repeat	130165	130909	1271	+	.	.
scaffold72	subtractBed	intrn	149718	149780	.	+	.	Parent=CGI_10017838;
	scaffold72	TRF	Tandem_Repeat	149718	149780	117	+	.	.
scaffold72	subtractBed	intrn	154246	154458	.	+	.	Parent=CGI_10017838;
	scaffold72	WUBlastX	LINE_RTE-X	154246	154458	26	+	.	.
scaffold72	subtractBed	intrn	157967	158533	.	+	.	Parent=CGI_10017838;
	scaffold72	WUBlastX	LINE_RTE-BovB	157967	158533	276	-	.	.
scaffold72	subtractBed	intrn	158535	159197	.	+	.	Parent=CGI_10017838;
	scaffold72	WUBlastX	LINE_RTE-BovB	158535	159197	588	-	.	.
scaffold72	subtractBed	intrn	158535	159362	.	+	.	Parent=CGI_10017838;
	scaffold72	WUBlastX	LINE_RTE-BovB	158535	159362	345	-	.	.
scaffold72	subtractBed	intrn	195422	195543	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	195422	195543	190	+	.	.
scaffold72	subtractBed	intrn	195425	195579	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	195425	195579	103	+	.	.
scaffold72	subtractBed	intrn	195747	195940	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	195747	195940	262	+	.	.
scaffold72	subtractBed	intrn	195767	196242	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	195767	196266	589	+	.	.
scaffold72	subtractBed	intrn	195841	195922	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	195841	195922	64	+	.	.
scaffold72	subtractBed	intrn	197919	198387	.	-	.	Parent=CGI_10017840;
	scaffold72	TRF	Tandem_Repeat	197919	198387	508	+	.	.
scaffold72	subtractBed	intrn	209326	209430	.	-	.	Parent=CGI_10017841;
	scaffold72	WUBlastX	DNA_TcMar-Marin	209326	209430	21	+	.	.
scaffold72	subtractBed	intrn	209739	210272	.	-	.	Parent=CGI_10017841;
	scaffold72	WUBlastX	DNA_TcMar-Marin	209739	210272	121	+	.	.
scaffold72	subtractBed	intrn	209622	210272	.	-	.	Parent=CGI_10017841;
	scaffold72	WUBlastX	DNA_TcMar-Marin	209622	210272	112	+	.	.
scaffold72	subtractBed	intrn	349772	349875	.	-	.	Parent=CGI_10017845;
	scaffold72	TRF	Tandem_Repeat	349772	349875	199	+	.	.
scaffold72	subtractBed	intrn	470575	470739	.	+	.	Parent=CGI_10017848;
	scaffold72	WUBlastX	LINE_RTE-X	470575	470739	39	-	.	.
scaffold721	subtractBed	intrn	79104	79170	.	+	.	Parent=CGI_10021995;
	scaffold721	TRF	Tandem_Repeat	79104	79170	134	+	.	.
scaffold721	subtractBed	intrn	83717	84010	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	83717	84010	152	+	.	.
scaffold721	subtractBed	intrn	83194	83847	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	83194	83847	324	+	.	.
scaffold721	subtractBed	intrn	84424	84570	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	84424	84570	80	+	.	.
scaffold721	subtractBed	intrn	83025	83123	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	83025	83123	42	+	.	.
scaffold721	subtractBed	intrn	83197	83709	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	83197	83709	328	+	.	.
scaffold721	subtractBed	intrn	84015	84410	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	84015	84410	191	+	.	.
scaffold721	subtractBed	intrn	83071	83721	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	83071	83721	289	+	.	.
scaffold721	subtractBed	intrn	82922	83014	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	82922	83014	42	+	.	.
scaffold721	subtractBed	intrn	82904	83008	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	82904	83008	30	+	.	.
scaffold721	subtractBed	intrn	84424	84603	.	+	.	Parent=CGI_10021995;
	scaffold721	WUBlastX	LINE_L2	84424	84603	55	+	.	.
scaffold721	subtractBed	intrn	110257	110292	.	-	.	Parent=CGI_10021996;
	scaffold721	TRF	Tandem_Repeat	110257	110292	54	+	.	.
scaffold721	subtractBed	intrn	139935	139972	.	+	.	Parent=CGI_10021997;
	scaffold721	TRF	Tandem_Repeat	139935	139972	76	+	.	.
scaffold721	subtractBed	intrn	145655	145711	.	+	.	Parent=CGI_10021997;
	scaffold721	TRF	Tandem_Repeat	145655	145711	59	+	.	.
scaffold721	subtractBed	intrn	173689	174420	.	-	.	Parent=CGI_10021998;
	scaffold721	TRF	Tandem_Repeat	173689	174420	1286	+	.	.
scaffold721	subtractBed	intrn	178044	178097	.	-	.	Parent=CGI_10021998;
	scaffold721	TRF	Tandem_Repeat	178044	178097	74	+	.	.
scaffold721	subtractBed	intrn	315120	315186	.	+	.	Parent=CGI_10021999;
	scaffold721	TRF	Tandem_Repeat	315120	315186	134	+	.	.
scaffold721	subtractBed	intrn	323264	323304	.	+	.	Parent=CGI_10021999;
	scaffold721	TRF	Tandem_Repeat	323264	323304	66	+	.	.
scaffold721	subtractBed	intrn	350350	350463	.	+	.	Parent=CGI_10022001;
	scaffold721	WUBlastX	LINE_CR1	350170	350463	59	+	.	.
scaffold721	subtractBed	intrn	376047	376351	.	+	.	Parent=CGI_10022002;
	scaffold721	TRF	Tandem_Repeat	376047	376351	371	+	.	.
scaffold721	subtractBed	intrn	378796	379228	.	+	.	Parent=CGI_10022002;
	scaffold721	TRF	Tandem_Repeat	378796	379228	625	+	.	.
scaffold721	subtractBed	intrn	386994	387169	.	+	.	Parent=CGI_10022002;
	scaffold721	TRF	Tandem_Repeat	386994	387169	83	+	.	.
scaffold721	subtractBed	intrn	395474	395606	.	+	.	Parent=CGI_10022002;
	scaffold721	TRF	Tandem_Repeat	395474	395606	121	+	.	.
scaffold721	subtractBed	intrn	422438	422667	.	+	.	Parent=CGI_10022004;
	scaffold721	TRF	Tandem_Repeat	422438	422667	302	+	.	.
scaffold721	subtractBed	intrn	488928	489150	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	488928	489150	246	+	.	.
scaffold721	subtractBed	intrn	488923	489180	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	488923	489180	262	+	.	.
scaffold721	subtractBed	intrn	488952	489209	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	488952	489209	115	+	.	.
scaffold721	subtractBed	intrn	494277	494929	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	494277	494929	965	+	.	.
scaffold721	subtractBed	intrn	494946	494988	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	494946	494988	59	+	.	.
scaffold721	subtractBed	intrn	496018	496054	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	496018	496054	74	+	.	.
scaffold721	subtractBed	intrn	501870	502345	.	-	.	Parent=CGI_10022007;
	scaffold721	TRF	Tandem_Repeat	501870	502345	740	+	.	.
scaffold721	subtractBed	intrn	526056	526233	.	+	.	Parent=CGI_10022008;
	scaffold721	TRF	Tandem_Repeat	526056	526233	94	+	.	.
scaffold721	subtractBed	intrn	535889	535946	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	535889	535946	116	+	.	.
scaffold721	subtractBed	intrn	537888	537923	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	537888	537923	72	+	.	.
scaffold721	subtractBed	intrn	540409	540617	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	540409	540617	391	+	.	.
scaffold721	subtractBed	intrn	540409	540989	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	540409	540989	545	+	.	.
scaffold721	subtractBed	intrn	540409	540989	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	540409	540989	545	+	.	.
scaffold721	subtractBed	intrn	540616	540989	.	-	.	Parent=CGI_10022009;
	scaffold721	TRF	Tandem_Repeat	540616	540989	649	+	.	.
scaffold721	subtractBed	intrn	535889	535946	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	535889	535946	116	+	.	.
scaffold721	subtractBed	intrn	537888	537923	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	537888	537923	72	+	.	.
scaffold721	subtractBed	intrn	540409	540617	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	540409	540617	391	+	.	.
scaffold721	subtractBed	intrn	540409	540989	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	540409	540989	545	+	.	.
scaffold721	subtractBed	intrn	540409	540989	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	540409	540989	545	+	.	.
scaffold721	subtractBed	intrn	540616	540989	.	+	.	Parent=CGI_10022010;
	scaffold721	TRF	Tandem_Repeat	540616	540989	649	+	.	.
scaffold721	subtractBed	intrn	571590	571892	.	-	.	Parent=CGI_10022013;
	scaffold721	TRF	Tandem_Repeat	571580	571892	599	+	.	.
scaffold721	subtractBed	intrn	571868	572108	.	-	.	Parent=CGI_10022013;
	scaffold721	TRF	Tandem_Repeat	571868	572108	178	+	.	.
scaffold721	subtractBed	intrn	571868	572152	.	-	.	Parent=CGI_10022013;
	scaffold721	TRF	Tandem_Repeat	571868	572152	135	+	.	.
scaffold721	subtractBed	intrn	572368	572608	.	-	.	Parent=CGI_10022013;
	scaffold721	TRF	Tandem_Repeat	572368	572608	178	+	.	.
scaffold721	subtractBed	intrn	572368	572652	.	-	.	Parent=CGI_10022013;
	scaffold721	TRF	Tandem_Repeat	572368	572652	135	+	.	.
scaffold721	subtractBed	intrn	594330	594929	.	-	.	Parent=CGI_10022014;
	scaffold721	WUBlastX	LINE_RTE-X	594330	594929	115	-	.	.
scaffold721	subtractBed	intrn	594228	594896	.	-	.	Parent=CGI_10022014;
	scaffold721	WUBlastX	LINE_RTE-X	594228	594896	86	-	.	.
scaffold721	subtractBed	intrn	603896	604056	.	-	.	Parent=CGI_10022014;
	scaffold721	TRF	Tandem_Repeat	603896	604056	277	+	.	.
scaffold721	subtractBed	intrn	624033	624072	.	+	.	Parent=CGI_10022015;
	scaffold721	TRF	Tandem_Repeat	624033	624072	80	+	.	.
scaffold721	subtractBed	intrn	658509	658548	.	+	.	Parent=CGI_10022017;
	scaffold721	TRF	Tandem_Repeat	658509	658548	80	+	.	.
scaffold721	subtractBed	intrn	659139	659181	.	+	.	Parent=CGI_10022017;
	scaffold721	TRF	Tandem_Repeat	659139	659181	86	+	.	.
scaffold721	subtractBed	intrn	662501	662531	.	+	.	Parent=CGI_10022018;
	scaffold721	TRF	Tandem_Repeat	662501	662531	62	+	.	.
scaffold721	subtractBed	intrn	665833	666046	.	+	.	Parent=CGI_10022018;
	scaffold721	TRF	Tandem_Repeat	665833	666046	151	+	.	.
scaffold721	subtractBed	intrn	666072	666257	.	+	.	Parent=CGI_10022018;
	scaffold721	TRF	Tandem_Repeat	666072	666257	113	+	.	.
scaffold722	subtractBed	intrn	10328	10556	.	-	.	Parent=CGI_10012186;
	scaffold722	TRF	Tandem_Repeat	10328	10556	280	+	.	.
scaffold722	subtractBed	intrn	75460	75669	.	+	.	Parent=CGI_10012189;
	scaffold722	TRF	Tandem_Repeat	75460	75669	259	+	.	.
scaffold722	subtractBed	intrn	76081	76415	.	+	.	Parent=CGI_10012189;
	scaffold722	TRF	Tandem_Repeat	76081	76415	424	+	.	.
scaffold722	subtractBed	intrn	75969	76397	.	+	.	Parent=CGI_10012189;
	scaffold722	TRF	Tandem_Repeat	75969	76397	309	+	.	.
scaffold722	subtractBed	intrn	114350	114389	.	-	.	Parent=CGI_10012192;
	scaffold722	TRF	Tandem_Repeat	114350	114389	80	+	.	.
scaffold722	subtractBed	intrn	121287	121321	.	-	.	Parent=CGI_10012193;
	scaffold722	TRF	Tandem_Repeat	121287	121321	52	+	.	.
scaffold722	subtractBed	intrn	206696	206862	.	+	.	Parent=CGI_10012200;
	scaffold722	TRF	Tandem_Repeat	206696	206862	192	+	.	.
scaffold722	subtractBed	intrn	220614	220775	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	220614	220775	98	+	.	.
scaffold722	subtractBed	intrn	230249	230296	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	230249	230296	96	+	.	.
scaffold722	subtractBed	intrn	236340	237532	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	236340	237532	1306	+	.	.
scaffold722	subtractBed	intrn	242682	242927	.	-	.	Parent=CGI_10012201;
	scaffold722	WUBlastX	DNA_TcMar-Marin	242682	242927	70	-	.	.
scaffold722	subtractBed	intrn	242449	242607	.	-	.	Parent=CGI_10012201;
	scaffold722	WUBlastX	DNA_TcMar-Marin	242449	242607	44	-	.	.
scaffold722	subtractBed	intrn	242506	242664	.	-	.	Parent=CGI_10012201;
	scaffold722	WUBlastX	DNA_TcMar-Marin	242506	242664	73	-	.	.
scaffold722	subtractBed	intrn	247724	247755	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	247724	247755	64	+	.	.
scaffold722	subtractBed	intrn	251318	251737	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	251318	251737	312	+	.	.
scaffold722	subtractBed	intrn	251359	251655	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	251359	251655	300	+	.	.
scaffold722	subtractBed	intrn	259383	259596	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	259383	259596	171	+	.	.
scaffold722	subtractBed	intrn	259607	259829	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	259607	259829	182	+	.	.
scaffold722	subtractBed	intrn	260093	260239	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	260093	260239	188	+	.	.
scaffold722	subtractBed	intrn	260093	260260	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	260093	260260	174	+	.	.
scaffold722	subtractBed	intrn	270378	270563	.	-	.	Parent=CGI_10012201;
	scaffold722	TRF	Tandem_Repeat	270378	270563	112	+	.	.
scaffold722	subtractBed	intrn	281619	281680	.	-	.	Parent=CGI_10012202;
	scaffold722	TRF	Tandem_Repeat	281619	281680	124	+	.	.
scaffold723	subtractBed	intrn	28826	28858	.	-	.	Parent=CGI_10015252;
	scaffold723	TRF	Tandem_Repeat	28826	28858	66	+	.	.
scaffold723	subtractBed	intrn	76391	76759	.	+	.	Parent=CGI_10015256;
	scaffold723	WUBlastX	DNA_Sola	76391	76759	86	+	.	.
scaffold723	subtractBed	intrn	80166	80459	.	+	.	Parent=CGI_10015256;
	scaffold723	WUBlastX	DNA_Sola	80166	80459	66	+	.	.
scaffold723	subtractBed	intrn	80468	80626	.	+	.	Parent=CGI_10015256;
	scaffold723	WUBlastX	DNA_Sola	80468	80626	54	+	.	.
scaffold723	subtractBed	intrn	91104	91148	.	+	.	Parent=CGI_10015257;
	scaffold723	TRF	Tandem_Repeat	91104	91148	54	+	.	.
scaffold723	subtractBed	intrn	105559	105650	.	+	.	Parent=CGI_10015257;
	scaffold723	TRF	Tandem_Repeat	105559	105650	184	+	.	.
scaffold723	subtractBed	intrn	127344	127430	.	-	.	Parent=CGI_10015258;
	scaffold723	TRF	Tandem_Repeat	127344	127430	59	+	.	.
scaffold723	subtractBed	intrn	132135	132193	.	+	.	Parent=CGI_10015259;
	scaffold723	TRF	Tandem_Repeat	132135	132193	109	+	.	.
scaffold723	subtractBed	intrn	139582	139655	.	+	.	Parent=CGI_10015259;
	scaffold723	TRF	Tandem_Repeat	139582	139655	148	+	.	.
scaffold723	subtractBed	intrn	170181	170236	.	+	.	Parent=CGI_10015262;
	scaffold723	TRF	Tandem_Repeat	170181	170236	112	+	.	.
scaffold723	subtractBed	intrn	211919	212098	.	-	.	Parent=CGI_10015263;
	scaffold723	TRF	Tandem_Repeat	211919	212098	62	+	.	.
scaffold723	subtractBed	intrn	212019	212103	.	-	.	Parent=CGI_10015263;
	scaffold723	TRF	Tandem_Repeat	212019	212103	82	+	.	.
scaffold723	subtractBed	intrn	206039	208108	.	-	.	Parent=CGI_10015263;
	scaffold723	WUBlastX	LTR_Gypsy	206039	208108	1586	-	.	.
scaffold723	subtractBed	intrn	209104	209604	.	-	.	Parent=CGI_10015263;
	scaffold723	WUBlastX	LTR_Gypsy	209104	209604	85	-	.	.
scaffold723	subtractBed	intrn	208111	209526	.	-	.	Parent=CGI_10015263;
	scaffold723	WUBlastX	LTR_Gypsy	208111	209526	979	-	.	.
scaffold723	subtractBed	intrn	209616	209957	.	-	.	Parent=CGI_10015263;
	scaffold723	WUBlastX	LTR_Gypsy	209616	209957	292	-	.	.
scaffold723	subtractBed	intrn	213563	213612	.	-	.	Parent=CGI_10015263;
	scaffold723	TRF	Tandem_Repeat	213563	213612	84	+	.	.
scaffold723	subtractBed	intrn	243982	244111	.	-	.	Parent=CGI_10015264;
	scaffold723	TRF	Tandem_Repeat	243982	244111	260	+	.	.
scaffold723	subtractBed	intrn	351477	352256	.	+	.	Parent=CGI_10015272;
	scaffold723	TRF	Tandem_Repeat	351477	352256	963	+	.	.
scaffold723	subtractBed	intrn	353983	354177	.	+	.	Parent=CGI_10015272;
	scaffold723	TRF	Tandem_Repeat	353983	354177	183	+	.	.
scaffold723	subtractBed	intrn	372038	372082	.	+	.	Parent=CGI_10015274;
	scaffold723	TRF	Tandem_Repeat	372038	372082	90	+	.	.
scaffold723	subtractBed	intrn	372440	372485	.	+	.	Parent=CGI_10015274;
	scaffold723	TRF	Tandem_Repeat	372440	372485	92	+	.	.
scaffold723	subtractBed	intrn	377948	378320	.	+	.	Parent=CGI_10015274;
	scaffold723	TRF	Tandem_Repeat	377948	378334	432	+	.	.
scaffold723	subtractBed	intrn	382706	385000	.	+	.	Parent=CGI_10015274;
	scaffold723	TRF	Tandem_Repeat	382706	385000	2832	+	.	.
scaffold723	subtractBed	intrn	382706	385000	.	+	.	Parent=CGI_10015274;
	scaffold723	TRF	Tandem_Repeat	382706	385000	2946	+	.	.
scaffold723	subtractBed	intrn	397085	397314	.	-	.	Parent=CGI_10015275;
	scaffold723	TRF	Tandem_Repeat	397085	397314	255	+	.	.
scaffold723	subtractBed	intrn	401803	404045	.	-	.	Parent=CGI_10015275;
	scaffold723	TRF	Tandem_Repeat	401803	404060	3183	+	.	.
scaffold723	subtractBed	intrn	398718	398873	.	-	.	Parent=CGI_10015275;
	scaffold723	WUBlastX	LINE_RTE-BovB	398718	398873	56	+	.	.
scaffold723	subtractBed	intrn	398878	399879	.	-	.	Parent=CGI_10015275;
	scaffold723	WUBlastX	LINE_RTE-BovB	398878	399879	440	+	.	.
scaffold723	subtractBed	intrn	405031	405085	.	-	.	Parent=CGI_10015275;
	scaffold723	TRF	Tandem_Repeat	405031	405085	110	+	.	.
scaffold723	subtractBed	intrn	408759	408789	.	-	.	Parent=CGI_10015275;
	scaffold723	TRF	Tandem_Repeat	408759	408789	53	+	.	.
scaffold724	subtractBed	intrn	25425	25467	.	-	.	Parent=CGI_10011484;
	scaffold724	TRF	Tandem_Repeat	25425	25467	59	+	.	.
scaffold724	subtractBed	intrn	43956	44019	.	+	.	Parent=CGI_10011487;
	scaffold724	TRF	Tandem_Repeat	43956	44019	110	+	.	.
scaffold724	subtractBed	intrn	107082	107208	.	-	.	Parent=CGI_10011493;
	scaffold724	TRF	Tandem_Repeat	107082	107208	141	+	.	.
scaffold724	subtractBed	intrn	172327	172399	.	-	.	Parent=CGI_10011498;
	scaffold724	TRF	Tandem_Repeat	172327	172399	146	+	.	.
scaffold724	subtractBed	intrn	174080	174137	.	-	.	Parent=CGI_10011498;
	scaffold724	TRF	Tandem_Repeat	174080	174137	116	+	.	.
scaffold724	subtractBed	intrn	174440	174488	.	-	.	Parent=CGI_10011498;
	scaffold724	TRF	Tandem_Repeat	174440	174488	55	+	.	.
scaffold724	subtractBed	intrn	214310	214334	.	+	.	Parent=CGI_10011501;
	scaffold724	TRF	Tandem_Repeat	214310	214334	50	+	.	.
scaffold724	subtractBed	intrn	221191	221384	.	+	.	Parent=CGI_10011501;
	scaffold724	TRF	Tandem_Repeat	221191	221384	234	+	.	.
scaffold724	subtractBed	intrn	222015	222046	.	+	.	Parent=CGI_10011501;
	scaffold724	TRF	Tandem_Repeat	222015	222046	64	+	.	.
scaffold724	subtractBed	intrn	222658	222682	.	+	.	Parent=CGI_10011501;
	scaffold724	TRF	Tandem_Repeat	222658	222682	50	+	.	.
scaffold724	subtractBed	intrn	250110	250231	.	-	.	Parent=CGI_10011502;
	scaffold724	TRF	Tandem_Repeat	250110	250231	87	+	.	.
scaffold728	subtractBed	intrn	33477	33517	.	-	.	Parent=CGI_10018226;
	scaffold728	TRF	Tandem_Repeat	33477	33517	82	+	.	.
scaffold728	subtractBed	intrn	53755	53784	.	-	.	Parent=CGI_10018226;
	scaffold728	TRF	Tandem_Repeat	53755	53784	53	+	.	.
scaffold728	subtractBed	intrn	55156	55255	.	-	.	Parent=CGI_10018226;
	scaffold728	TRF	Tandem_Repeat	55156	55255	184	+	.	.
scaffold728	subtractBed	intrn	75154	75212	.	+	.	Parent=CGI_10018227;
	scaffold728	TRF	Tandem_Repeat	75154	75212	118	+	.	.
scaffold728	subtractBed	intrn	93783	93835	.	-	.	Parent=CGI_10018228;
	scaffold728	TRF	Tandem_Repeat	93783	93835	106	+	.	.
scaffold728	subtractBed	intrn	106667	106667	.	-	.	Parent=CGI_10018228;
	scaffold728	WUBlastX	LTR_Gypsy	106667	106831	43	-	.	.
scaffold728	subtractBed	intrn	106823	106831	.	-	.	Parent=CGI_10018228;
	scaffold728	WUBlastX	LTR_Gypsy	106667	106831	43	-	.	.
scaffold728	subtractBed	intrn	107229	107238	.	-	.	Parent=CGI_10018228;
	scaffold728	WUBlastX	LTR_Gypsy	107113	107238	27	-	.	.
scaffold728	subtractBed	intrn	122948	123003	.	+	.	Parent=CGI_10018229;
	scaffold728	TRF	Tandem_Repeat	122948	123003	112	+	.	.
scaffold728	subtractBed	intrn	126275	126322	.	+	.	Parent=CGI_10018229;
	scaffold728	TRF	Tandem_Repeat	126275	126322	51	+	.	.
scaffold728	subtractBed	intrn	126280	126329	.	+	.	Parent=CGI_10018229;
	scaffold728	TRF	Tandem_Repeat	126280	126329	73	+	.	.
scaffold728	subtractBed	intrn	126284	126329	.	+	.	Parent=CGI_10018229;
	scaffold728	TRF	Tandem_Repeat	126284	126329	56	+	.	.
scaffold728	subtractBed	intrn	126353	127434	.	+	.	Parent=CGI_10018229;
	scaffold728	TRF	Tandem_Repeat	126353	127434	1595	+	.	.
scaffold728	subtractBed	intrn	130287	130323	.	+	.	Parent=CGI_10018230;
	scaffold728	TRF	Tandem_Repeat	130287	130323	56	+	.	.
scaffold728	subtractBed	intrn	168400	168705	.	+	.	Parent=CGI_10018231;
	scaffold728	WUBlastX	DNA_hAT-Blackja	168400	168705	88	-	.	.
scaffold728	subtractBed	intrn	242016	242065	.	+	.	Parent=CGI_10018234;
	scaffold728	TRF	Tandem_Repeat	242016	242065	100	+	.	.
scaffold728	subtractBed	intrn	243008	243046	.	+	.	Parent=CGI_10018234;
	scaffold728	TRF	Tandem_Repeat	243008	243046	78	+	.	.
scaffold728	subtractBed	intrn	243348	243379	.	+	.	Parent=CGI_10018234;
	scaffold728	TRF	Tandem_Repeat	243348	243379	55	+	.	.
scaffold728	subtractBed	intrn	249444	249480	.	+	.	Parent=CGI_10018235;
	scaffold728	TRF	Tandem_Repeat	249444	249480	74	+	.	.
scaffold728	subtractBed	intrn	290318	290362	.	+	.	Parent=CGI_10018238;
	scaffold728	TRF	Tandem_Repeat	290318	290362	65	+	.	.
scaffold728	subtractBed	intrn	304385	304419	.	+	.	Parent=CGI_10018240;
	scaffold728	TRF	Tandem_Repeat	304385	304419	70	+	.	.
scaffold728	subtractBed	intrn	305186	305562	.	+	.	Parent=CGI_10018240;
	scaffold728	TRF	Tandem_Repeat	305186	305562	481	+	.	.
scaffold728	subtractBed	intrn	305195	305569	.	+	.	Parent=CGI_10018240;
	scaffold728	TRF	Tandem_Repeat	305195	305569	551	+	.	.
scaffold728	subtractBed	intrn	493548	493597	.	-	.	Parent=CGI_10018245;
	scaffold728	TRF	Tandem_Repeat	493548	493597	59	+	.	.
scaffold728	subtractBed	intrn	496085	496137	.	-	.	Parent=CGI_10018245;
	scaffold728	TRF	Tandem_Repeat	496085	496137	106	+	.	.
scaffold729	subtractBed	intrn	11155	11202	.	-	.	Parent=CGI_10001545;
	scaffold729	TRF	Tandem_Repeat	11155	11202	52	+	.	.
scaffold729	subtractBed	intrn	11476	11543	.	-	.	Parent=CGI_10001545;
	scaffold729	TRF	Tandem_Repeat	11476	11543	82	+	.	.
scaffold730	subtractBed	intrn	115763	115928	.	+	.	Parent=CGI_10019888;
	scaffold730	TRF	Tandem_Repeat	115763	115928	217	+	.	.
scaffold730	subtractBed	intrn	139615	139794	.	+	.	Parent=CGI_10019888;
	scaffold730	TRF	Tandem_Repeat	139615	139794	267	+	.	.
scaffold730	subtractBed	intrn	135655	135671	.	+	.	Parent=CGI_10019888;
	scaffold730	WUBlastX	DNA_Kolobok	135552	135671	31	+	.	.
scaffold730	subtractBed	intrn	267198	267452	.	-	.	Parent=CGI_10019892;
	scaffold730	WUBlastX	LINE_RTE-X	267198	267452	61	-	.	.
scaffold730	subtractBed	intrn	267276	267833	.	-	.	Parent=CGI_10019892;
	scaffold730	WUBlastX	LINE_RTE-X	267276	267833	120	-	.	.
scaffold730	subtractBed	intrn	267814	267912	.	-	.	Parent=CGI_10019892;
	scaffold730	WUBlastX	LINE_RTE-X	267814	267912	23	-	.	.
scaffold730	subtractBed	intrn	271145	271181	.	-	.	Parent=CGI_10019892;
	scaffold730	TRF	Tandem_Repeat	271145	271181	56	+	.	.
scaffold730	subtractBed	intrn	271319	271365	.	-	.	Parent=CGI_10019892;
	scaffold730	TRF	Tandem_Repeat	271319	271365	53	+	.	.
scaffold730	subtractBed	intrn	349943	349973	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	349943	349973	62	+	.	.
scaffold730	subtractBed	intrn	350055	350603	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	350055	350603	698	+	.	.
scaffold730	subtractBed	intrn	350055	350603	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	350055	350603	713	+	.	.
scaffold730	subtractBed	intrn	352818	353312	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	352818	353312	864	+	.	.
scaffold730	subtractBed	intrn	353282	353566	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	353282	353566	151	+	.	.
scaffold730	subtractBed	intrn	353528	353904	.	+	.	Parent=CGI_10019894;
	scaffold730	TRF	Tandem_Repeat	353528	353904	655	+	.	.
scaffold730	subtractBed	intrn	371200	371532	.	-	.	Parent=CGI_10019895;
	scaffold730	WUBlastX	LINE_L1-Tx1	371200	371532	48	-	.	.
scaffold730	subtractBed	intrn	384291	384318	.	-	.	Parent=CGI_10019895;
	scaffold730	TRF	Tandem_Repeat	384291	384318	56	+	.	.
scaffold730	subtractBed	intrn	384875	385004	.	-	.	Parent=CGI_10019895;
	scaffold730	TRF	Tandem_Repeat	384875	385004	136	+	.	.
scaffold730	subtractBed	intrn	385138	385229	.	-	.	Parent=CGI_10019895;
	scaffold730	TRF	Tandem_Repeat	385138	385229	121	+	.	.
scaffold730	subtractBed	intrn	387746	388087	.	-	.	Parent=CGI_10019895;
	scaffold730	WUBlastX	DNA_Crypton	387746	388087	72	-	.	.
scaffold730	subtractBed	intrn	388453	389073	.	-	.	Parent=CGI_10019895;
	scaffold730	WUBlastX	DNA_Crypton	388453	389073	65	-	.	.
scaffold730	subtractBed	intrn	431832	432221	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	431832	432221	501	+	.	.
scaffold730	subtractBed	intrn	431832	432221	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	431832	432221	512	+	.	.
scaffold730	subtractBed	intrn	437801	437887	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	437801	437887	165	+	.	.
scaffold730	subtractBed	intrn	443149	443432	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	443149	443432	434	+	.	.
scaffold730	subtractBed	intrn	445736	445917	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	445736	445917	173	+	.	.
scaffold730	subtractBed	intrn	453798	454317	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	453798	454317	519	+	.	.
scaffold730	subtractBed	intrn	453804	454317	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	453804	454317	573	+	.	.
scaffold730	subtractBed	intrn	453804	454317	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	453804	454317	614	+	.	.
scaffold730	subtractBed	intrn	453887	454057	.	-	.	Parent=CGI_10019899;
	scaffold730	TRF	Tandem_Repeat	453887	454057	163	+	.	.
scaffold730	subtractBed	intrn	431832	432221	.	+	.	Parent=CGI_10019900;
	scaffold730	TRF	Tandem_Repeat	431832	432221	501	+	.	.
scaffold730	subtractBed	intrn	431832	432221	.	+	.	Parent=CGI_10019900;
	scaffold730	TRF	Tandem_Repeat	431832	432221	512	+	.	.
scaffold730	subtractBed	intrn	437801	437887	.	+	.	Parent=CGI_10019901;
	scaffold730	TRF	Tandem_Repeat	437801	437887	165	+	.	.
scaffold730	subtractBed	intrn	465960	466121	.	+	.	Parent=CGI_10019904;
	scaffold730	TRF	Tandem_Repeat	465960	466121	315	+	.	.
scaffold730	subtractBed	intrn	468912	468987	.	+	.	Parent=CGI_10019904;
	scaffold730	TRF	Tandem_Repeat	468912	468987	57	+	.	.
scaffold730	subtractBed	intrn	512823	513132	.	-	.	Parent=CGI_10019906;
	scaffold730	TRF	Tandem_Repeat	512823	513132	566	+	.	.
scaffold730	subtractBed	intrn	515948	515996	.	-	.	Parent=CGI_10019906;
	scaffold730	TRF	Tandem_Repeat	515948	515996	98	+	.	.
scaffold730	subtractBed	intrn	531958	532030	.	+	.	Parent=CGI_10019907;
	scaffold730	TRF	Tandem_Repeat	531958	532030	146	+	.	.
scaffold733	subtractBed	intrn	10585	10622	.	-	.	Parent=CGI_10025861;
	scaffold733	TRF	Tandem_Repeat	10585	10622	76	+	.	.
scaffold733	subtractBed	intrn	10622	10676	.	-	.	Parent=CGI_10025861;
	scaffold733	TRF	Tandem_Repeat	10622	10676	110	+	.	.
scaffold733	subtractBed	intrn	40894	40989	.	-	.	Parent=CGI_10025863;
	scaffold733	WUBlastX	LTR_Copia	40894	40989	26	+	.	.
scaffold733	subtractBed	intrn	38891	39604	.	-	.	Parent=CGI_10025863;
	scaffold733	WUBlastX	LTR_Gypsy	38891	39604	119	+	.	.
scaffold733	subtractBed	intrn	39077	40333	.	-	.	Parent=CGI_10025863;
	scaffold733	WUBlastX	LTR_Gypsy	39077	40333	1145	+	.	.
scaffold733	subtractBed	intrn	45213	45954	.	-	.	Parent=CGI_10025863;
	scaffold733	TRF	Tandem_Repeat	45213	45954	796	+	.	.
scaffold733	subtractBed	intrn	49045	49049	.	-	.	Parent=CGI_10025863;
	scaffold733	WUBlastX	DNA_Maverick	49045	49197	60	-	.	.
scaffold733	subtractBed	intrn	217495	217659	.	-	.	Parent=CGI_10025867;
	scaffold733	WUBlastX	DNA_TcMar-m44	217495	217659	29	-	.	.
scaffold733	subtractBed	intrn	216318	217247	.	-	.	Parent=CGI_10025867;
	scaffold733	WUBlastX	DNA_TcMar-m44	216318	217247	583	-	.	.
scaffold733	subtractBed	intrn	222494	222658	.	-	.	Parent=CGI_10025867;
	scaffold733	WUBlastX	DNA_TcMar-m44	222494	222658	29	-	.	.
scaffold733	subtractBed	intrn	221317	222246	.	-	.	Parent=CGI_10025867;
	scaffold733	WUBlastX	DNA_TcMar-m44	221317	222246	583	-	.	.
scaffold733	subtractBed	intrn	227627	228132	.	+	.	Parent=CGI_10025868;
	scaffold733	TRF	Tandem_Repeat	227627	228132	940	+	.	.
scaffold733	subtractBed	intrn	254177	254496	.	+	.	Parent=CGI_10025870;
	scaffold733	TRF	Tandem_Repeat	254177	254496	256	+	.	.
scaffold733	subtractBed	intrn	254139	254583	.	+	.	Parent=CGI_10025870;
	scaffold733	TRF	Tandem_Repeat	254139	254583	748	+	.	.
scaffold733	subtractBed	intrn	258391	258590	.	+	.	Parent=CGI_10025870;
	scaffold733	TRF	Tandem_Repeat	258391	258590	348	+	.	.
scaffold733	subtractBed	intrn	268580	269611	.	+	.	Parent=CGI_10025870;
	scaffold733	WUBlastX	DNA_TcMar-Tc1	268580	269611	374	-	.	.
scaffold733	subtractBed	intrn	298769	299120	.	+	.	Parent=CGI_10025872;
	scaffold733	TRF	Tandem_Repeat	298769	299120	325	+	.	.
scaffold733	subtractBed	intrn	301908	301957	.	+	.	Parent=CGI_10025872;
	scaffold733	TRF	Tandem_Repeat	301908	301957	93	+	.	.
scaffold733	subtractBed	intrn	303750	303998	.	+	.	Parent=CGI_10025872;
	scaffold733	TRF	Tandem_Repeat	303750	303998	214	+	.	.
scaffold733	subtractBed	intrn	315238	315275	.	+	.	Parent=CGI_10025872;
	scaffold733	TRF	Tandem_Repeat	315238	315275	51	+	.	.
scaffold733	subtractBed	intrn	360805	360845	.	+	.	Parent=CGI_10025873;
	scaffold733	TRF	Tandem_Repeat	360805	360845	73	+	.	.
scaffold733	subtractBed	intrn	360386	360675	.	+	.	Parent=CGI_10025873;
	scaffold733	TRF	Tandem_Repeat	360386	360675	303	+	.	.
scaffold733	subtractBed	intrn	375766	375822	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	375766	375822	30	+	.	.
scaffold733	subtractBed	intrn	375970	376062	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	375970	376062	26	+	.	.
scaffold733	subtractBed	intrn	374869	375153	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	374869	375153	132	+	.	.
scaffold733	subtractBed	intrn	375742	375828	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	375742	375828	23	+	.	.
scaffold733	subtractBed	intrn	375289	375513	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	375289	375513	117	+	.	.
scaffold733	subtractBed	intrn	376261	376509	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	376261	376509	78	+	.	.
scaffold733	subtractBed	intrn	378913	378938	.	+	.	Parent=CGI_10025875;
	scaffold733	TRF	Tandem_Repeat	378913	378938	52	+	.	.
scaffold733	subtractBed	intrn	377317	377553	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	377317	377553	103	+	.	.
scaffold733	subtractBed	intrn	376842	377078	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	376842	377078	40	+	.	.
scaffold733	subtractBed	intrn	377953	378198	.	+	.	Parent=CGI_10025875;
	scaffold733	WUBlastX	DNA_Kolobok	377953	378198	145	-	.	.
scaffold733	subtractBed	intrn	385361	385418	.	+	.	Parent=CGI_10025875;
	scaffold733	TRF	Tandem_Repeat	385361	385418	73	+	.	.
scaffold733	subtractBed	intrn	385367	385418	.	+	.	Parent=CGI_10025875;
	scaffold733	TRF	Tandem_Repeat	385367	385418	86	+	.	.
scaffold733	subtractBed	intrn	401482	402304	.	+	.	Parent=CGI_10025875;
	scaffold733	TRF	Tandem_Repeat	401482	402304	875	+	.	.
scaffold733	subtractBed	intrn	410395	410741	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	410395	410741	586	+	.	.
scaffold733	subtractBed	intrn	410425	410852	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	410425	410852	215	+	.	.
scaffold733	subtractBed	intrn	411456	411501	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	411456	411501	92	+	.	.
scaffold733	subtractBed	intrn	413087	413638	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_L2	413087	413638	224	-	.	.
scaffold733	subtractBed	intrn	413102	413905	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_L2	413102	413905	164	-	.	.
scaffold733	subtractBed	intrn	417970	418017	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	417970	418017	82	+	.	.
scaffold733	subtractBed	intrn	424204	424475	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	424204	424475	237	+	.	.
scaffold733	subtractBed	intrn	431961	432005	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_DRE	431961	432005	23	+	.	.
scaffold733	subtractBed	intrn	433085	433149	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	433085	433149	80	+	.	.
scaffold733	subtractBed	intrn	436963	437012	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	436963	437012	66	+	.	.
scaffold733	subtractBed	intrn	471642	472079	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_Penelope	471642	472079	30	+	.	.
scaffold733	subtractBed	intrn	485085	485126	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	485085	485126	84	+	.	.
scaffold733	subtractBed	intrn	486286	486314	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	486286	486314	58	+	.	.
scaffold733	subtractBed	intrn	513063	513179	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_Penelope	513063	513179	28	-	.	.
scaffold733	subtractBed	intrn	513415	513837	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_Penelope	513415	513837	127	-	.	.
scaffold733	subtractBed	intrn	513412	513699	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_Penelope	513412	513699	130	-	.	.
scaffold733	subtractBed	intrn	513170	513403	.	+	.	Parent=CGI_10025876;
	scaffold733	WUBlastX	LINE_Penelope	513170	513403	32	-	.	.
scaffold733	subtractBed	intrn	521481	521528	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	521481	521528	96	+	.	.
scaffold733	subtractBed	intrn	522157	522211	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	522157	522211	101	+	.	.
scaffold733	subtractBed	intrn	531190	531384	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	531190	531384	336	+	.	.
scaffold733	subtractBed	intrn	536129	536873	.	+	.	Parent=CGI_10025876;
	scaffold733	TRF	Tandem_Repeat	536129	536873	653	+	.	.
scaffold733	subtractBed	intrn	554479	554555	.	+	.	Parent=CGI_10025877;
	scaffold733	TRF	Tandem_Repeat	554479	554555	154	+	.	.
scaffold733	subtractBed	intrn	567023	567114	.	+	.	Parent=CGI_10025878;
	scaffold733	TRF	Tandem_Repeat	567023	567114	168	+	.	.
scaffold733	subtractBed	intrn	641404	641690	.	-	.	Parent=CGI_10025882;
	scaffold733	TRF	Tandem_Repeat	641404	641690	337	+	.	.
scaffold733	subtractBed	intrn	688944	690016	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	688944	690016	1637	+	.	.
scaffold733	subtractBed	intrn	688944	690016	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	688944	690016	1617	+	.	.
scaffold733	subtractBed	intrn	688944	690016	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	688944	690016	1622	+	.	.
scaffold733	subtractBed	intrn	692101	692383	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	692101	692383	125	+	.	.
scaffold733	subtractBed	intrn	699642	699758	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	699642	699758	114	+	.	.
scaffold733	subtractBed	intrn	702376	702681	.	+	.	Parent=CGI_10025885;
	scaffold733	TRF	Tandem_Repeat	702376	702681	414	+	.	.
scaffold733	subtractBed	intrn	740978	741044	.	+	.	Parent=CGI_10025887;
	scaffold733	TRF	Tandem_Repeat	740978	741044	134	+	.	.
scaffold733	subtractBed	intrn	757588	757624	.	+	.	Parent=CGI_10025888;
	scaffold733	TRF	Tandem_Repeat	757588	757624	65	+	.	.
scaffold733	subtractBed	intrn	768168	768242	.	+	.	Parent=CGI_10025889;
	scaffold733	TRF	Tandem_Repeat	768168	768242	55	+	.	.
scaffold733	subtractBed	intrn	805842	805891	.	+	.	Parent=CGI_10025891;
	scaffold733	TRF	Tandem_Repeat	805842	805891	100	+	.	.
scaffold733	subtractBed	intrn	817908	818206	.	+	.	Parent=CGI_10025891;
	scaffold733	TRF	Tandem_Repeat	817908	818206	463	+	.	.
scaffold733	subtractBed	intrn	822940	822980	.	+	.	Parent=CGI_10025891;
	scaffold733	TRF	Tandem_Repeat	822940	822980	73	+	.	.
scaffold733	subtractBed	intrn	823667	823734	.	+	.	Parent=CGI_10025891;
	scaffold733	TRF	Tandem_Repeat	823667	823734	136	+	.	.
scaffold733	subtractBed	intrn	882271	882313	.	+	.	Parent=CGI_10025893;
	scaffold733	TRF	Tandem_Repeat	882271	882313	86	+	.	.
scaffold733	subtractBed	intrn	890222	891014	.	+	.	Parent=CGI_10025893;
	scaffold733	TRF	Tandem_Repeat	890222	891014	1146	+	.	.
scaffold733	subtractBed	intrn	892291	892952	.	+	.	Parent=CGI_10025893;
	scaffold733	TRF	Tandem_Repeat	892291	892952	909	+	.	.
scaffold733	subtractBed	intrn	892957	892991	.	+	.	Parent=CGI_10025893;
	scaffold733	TRF	Tandem_Repeat	892957	892991	52	+	.	.
scaffold733	subtractBed	intrn	888740	889537	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1-Tx1	888740	889537	50	-	.	.
scaffold733	subtractBed	intrn	889816	890124	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1-Tx1	889816	890124	190	-	.	.
scaffold733	subtractBed	intrn	891211	891777	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1	891211	891777	74	-	.	.
scaffold733	subtractBed	intrn	888887	889363	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1-Tx1	888887	889363	107	-	.	.
scaffold733	subtractBed	intrn	888875	889522	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1-Tx1	888875	889522	68	-	.	.
scaffold733	subtractBed	intrn	891259	891732	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1	891259	891732	140	-	.	.
scaffold733	subtractBed	intrn	889801	890205	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1	889801	890205	98	-	.	.
scaffold733	subtractBed	intrn	889524	889736	.	+	.	Parent=CGI_10025893;
	scaffold733	WUBlastX	LINE_L1-Tx1	889524	889736	31	-	.	.
scaffold733	subtractBed	intrn	913418	913573	.	-	.	Parent=CGI_10025894;
	scaffold733	WUBlastX	LINE_CR1	913418	913573	23	-	.	.
scaffold733	subtractBed	intrn	1018219	1018812	.	+	.	Parent=CGI_10025901;
	scaffold733	WUBlastX	LTR_Gypsy	1018219	1018812	41	+	.	.
scaffold733	subtractBed	intrn	1018067	1018191	.	+	.	Parent=CGI_10025901;
	scaffold733	WUBlastX	LTR_Gypsy	1017757	1018191	26	+	.	.
scaffold733	subtractBed	intrn	1018067	1018638	.	+	.	Parent=CGI_10025901;
	scaffold733	WUBlastX	LTR_Gypsy	1017931	1018638	43	+	.	.
scaffold733	subtractBed	intrn	1070353	1070408	.	-	.	Parent=CGI_10025904;
	scaffold733	TRF	Tandem_Repeat	1070353	1070408	67	+	.	.
scaffold733	subtractBed	intrn	1073313	1073356	.	-	.	Parent=CGI_10025904;
	scaffold733	TRF	Tandem_Repeat	1073313	1073356	88	+	.	.
scaffold734	subtractBed	intrn	20145	20786	.	-	.	Parent=CGI_10003361;
	scaffold734	WUBlastX	LINE_L2	20145	20786	252	-	.	.
scaffold734	subtractBed	intrn	20076	20975	.	-	.	Parent=CGI_10003361;
	scaffold734	WUBlastX	LINE_L2	20076	20975	28	-	.	.
scaffold734	subtractBed	intrn	20565	20867	.	-	.	Parent=CGI_10003361;
	scaffold734	WUBlastX	LINE_CR1	20565	20867	87	-	.	.
scaffold734	subtractBed	intrn	21284	21306	.	-	.	Parent=CGI_10003361;
	scaffold734	WUBlastX	LINE_L2	21284	21394	21	-	.	.
scaffold734	subtractBed	intrn	21352	21394	.	-	.	Parent=CGI_10003361;
	scaffold734	WUBlastX	LINE_L2	21284	21394	21	-	.	.
scaffold734	subtractBed	intrn	33398	33424	.	-	.	Parent=CGI_10003362;
	scaffold734	TRF	Tandem_Repeat	33398	33424	54	+	.	.
scaffold734	subtractBed	intrn	33502	33560	.	-	.	Parent=CGI_10003362;
	scaffold734	TRF	Tandem_Repeat	33502	33560	118	+	.	.
scaffold736	subtractBed	intrn	68510	68550	.	+	.	Parent=CGI_10004598;
	scaffold736	TRF	Tandem_Repeat	68510	68550	82	+	.	.
scaffold736	subtractBed	intrn	87481	87530	.	+	.	Parent=CGI_10004600;
	scaffold736	TRF	Tandem_Repeat	87481	87530	66	+	.	.
scaffold736	subtractBed	intrn	87481	87530	.	+	.	Parent=CGI_10004600;
	scaffold736	TRF	Tandem_Repeat	87481	87530	75	+	.	.
scaffold737	subtractBed	intrn	19409	19541	.	+	.	Parent=CGI_10014301;
	scaffold737	TRF	Tandem_Repeat	19409	19541	232	+	.	.
scaffold737	subtractBed	intrn	42065	42100	.	+	.	Parent=CGI_10014304;
	scaffold737	TRF	Tandem_Repeat	42065	42100	72	+	.	.
scaffold737	subtractBed	intrn	55179	55216	.	-	.	Parent=CGI_10014305;
	scaffold737	TRF	Tandem_Repeat	55179	55216	76	+	.	.
scaffold737	subtractBed	intrn	59265	59297	.	-	.	Parent=CGI_10014305;
	scaffold737	TRF	Tandem_Repeat	59265	59297	57	+	.	.
scaffold737	subtractBed	intrn	131308	131351	.	-	.	Parent=CGI_10014310;
	scaffold737	TRF	Tandem_Repeat	131308	131351	88	+	.	.
scaffold737	subtractBed	intrn	135115	135153	.	-	.	Parent=CGI_10014310;
	scaffold737	TRF	Tandem_Repeat	135115	135153	78	+	.	.
scaffold737	subtractBed	intrn	193209	193392	.	+	.	Parent=CGI_10014313;
	scaffold737	TRF	Tandem_Repeat	193209	193392	191	+	.	.
scaffold737	subtractBed	intrn	212471	212524	.	-	.	Parent=CGI_10014314;
	scaffold737	TRF	Tandem_Repeat	212471	212524	108	+	.	.
scaffold737	subtractBed	intrn	221514	221572	.	-	.	Parent=CGI_10014314;
	scaffold737	TRF	Tandem_Repeat	221514	221572	102	+	.	.
scaffold737	subtractBed	intrn	224184	224254	.	-	.	Parent=CGI_10014314;
	scaffold737	TRF	Tandem_Repeat	224184	224254	126	+	.	.
scaffold737	subtractBed	intrn	282375	282407	.	+	.	Parent=CGI_10014316;
	scaffold737	TRF	Tandem_Repeat	282375	282407	66	+	.	.
scaffold737	subtractBed	intrn	294767	295024	.	-	.	Parent=CGI_10014317;
	scaffold737	WUBlastX	LINE_L1	294767	295024	35	-	.	.
scaffold737	subtractBed	intrn	294014	294955	.	-	.	Parent=CGI_10014317;
	scaffold737	WUBlastX	LINE_L1-Tx1	294014	294955	142	-	.	.
scaffold737	subtractBed	intrn	305595	305631	.	-	.	Parent=CGI_10014318;
	scaffold737	TRF	Tandem_Repeat	305595	305631	74	+	.	.
scaffold737	subtractBed	intrn	335408	335449	.	+	.	Parent=CGI_10014319;
	scaffold737	TRF	Tandem_Repeat	335408	335449	84	+	.	.
scaffold737	subtractBed	intrn	353887	353990	.	+	.	Parent=CGI_10014319;
	scaffold737	TRF	Tandem_Repeat	353887	353990	73	+	.	.
scaffold737	subtractBed	intrn	353610	354087	.	+	.	Parent=CGI_10014319;
	scaffold737	TRF	Tandem_Repeat	353596	354087	442	+	.	.
scaffold737	subtractBed	intrn	353610	354087	.	+	.	Parent=CGI_10014319;
	scaffold737	TRF	Tandem_Repeat	353596	354087	496	+	.	.
scaffold737	subtractBed	intrn	355965	356118	.	+	.	Parent=CGI_10014319;
	scaffold737	TRF	Tandem_Repeat	355965	356119	129	+	.	.
scaffold737	subtractBed	intrn	366368	366470	.	-	.	Parent=CGI_10014320;
	scaffold737	TRF	Tandem_Repeat	366368	366470	188	+	.	.
scaffold737	subtractBed	intrn	368800	369241	.	-	.	Parent=CGI_10014320;
	scaffold737	TRF	Tandem_Repeat	368800	369241	679	+	.	.
scaffold737	subtractBed	intrn	376721	376752	.	-	.	Parent=CGI_10014320;
	scaffold737	TRF	Tandem_Repeat	376721	376752	64	+	.	.
scaffold737	subtractBed	intrn	389243	389296	.	+	.	Parent=CGI_10014321;
	scaffold737	TRF	Tandem_Repeat	389243	389296	108	+	.	.
scaffold738	subtractBed	intrn	1902	2183	.	+	.	Parent=CGI_10000540;
	scaffold738	WUBlastX	DNA_hAT-Tip100	1902	2183	98	+	.	.
scaffold738	subtractBed	intrn	1935	2261	.	+	.	Parent=CGI_10000540;
	scaffold738	WUBlastX	DNA_hAT-Tip100	1935	2261	45	+	.	.
scaffold738	subtractBed	intrn	1818	2153	.	+	.	Parent=CGI_10000540;
	scaffold738	WUBlastX	DNA_hAT-Tip100	1818	2153	63	+	.	.
scaffold738	subtractBed	intrn	1929	2162	.	+	.	Parent=CGI_10000540;
	scaffold738	WUBlastX	DNA_hAT-Tip100	1929	2162	107	+	.	.
scaffold743	subtractBed	intrn	1219	1546	.	+	.	Parent=CGI_10008608;
	scaffold743	TRF	Tandem_Repeat	1219	1546	452	+	.	.
scaffold743	subtractBed	intrn	1219	1539	.	+	.	Parent=CGI_10008608;
	scaffold743	TRF	Tandem_Repeat	1219	1539	459	+	.	.
scaffold743	subtractBed	intrn	1525	1723	.	+	.	Parent=CGI_10008608;
	scaffold743	TRF	Tandem_Repeat	1525	1723	170	+	.	.
scaffold743	subtractBed	intrn	7808	7937	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	7808	7937	224	+	.	.
scaffold743	subtractBed	intrn	7938	8476	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	7938	8476	981	+	.	.
scaffold743	subtractBed	intrn	8477	8637	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	8477	8637	268	+	.	.
scaffold743	subtractBed	intrn	8320	9764	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	8320	9764	2777	+	.	.
scaffold743	subtractBed	intrn	8638	8798	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	8638	8798	277	+	.	.
scaffold743	subtractBed	intrn	8799	8959	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	8799	8959	277	+	.	.
scaffold743	subtractBed	intrn	8960	9120	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	8960	9120	277	+	.	.
scaffold743	subtractBed	intrn	9121	9281	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	9121	9281	277	+	.	.
scaffold743	subtractBed	intrn	9282	9442	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	9282	9442	277	+	.	.
scaffold743	subtractBed	intrn	9443	9603	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	9443	9603	277	+	.	.
scaffold743	subtractBed	intrn	9604	9774	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	9604	9774	301	+	.	.
scaffold743	subtractBed	intrn	16095	16141	.	-	.	Parent=CGI_10008609;
	scaffold743	TRF	Tandem_Repeat	16095	16141	94	+	.	.
scaffold743	subtractBed	intrn	19208	19276	.	+	.	Parent=CGI_10008610;
	scaffold743	TRF	Tandem_Repeat	19208	19276	129	+	.	.
scaffold743	subtractBed	intrn	26701	26730	.	+	.	Parent=CGI_10008610;
	scaffold743	TRF	Tandem_Repeat	26701	26730	60	+	.	.
scaffold743	subtractBed	intrn	26768	26825	.	+	.	Parent=CGI_10008610;
	scaffold743	TRF	Tandem_Repeat	26768	26825	116	+	.	.
scaffold743	subtractBed	intrn	98319	98529	.	+	.	Parent=CGI_10008614;
	scaffold743	TRF	Tandem_Repeat	98319	98529	298	+	.	.
scaffold743	subtractBed	intrn	108226	108909	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_Tad1?	108226	108909	66	-	.	.
scaffold743	subtractBed	intrn	106816	107253	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	106816	107253	126	-	.	.
scaffold743	subtractBed	intrn	107835	108218	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	107835	108218	87	-	.	.
scaffold743	subtractBed	intrn	107342	107767	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	107342	107767	221	-	.	.
scaffold743	subtractBed	intrn	107204	107767	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	107204	107767	69	-	.	.
scaffold743	subtractBed	intrn	108840	108926	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	108840	108926	63	+	.	.
scaffold743	subtractBed	intrn	108867	108942	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-BovB	108867	108947	25	+	.	.
scaffold743	subtractBed	intrn	108940	108942	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	108940	110628	304	+	.	.
scaffold743	subtractBed	intrn	107775	108152	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	107775	108152	203	-	.	.
scaffold743	subtractBed	intrn	108211	108702	.	+	.	Parent=CGI_10008614;
	scaffold743	WUBlastX	LINE_RTE-X	108211	108702	351	-	.	.
scaffold743	subtractBed	intrn	208832	209416	.	-	.	Parent=CGI_10008616;
	scaffold743	WUBlastX	DNA_Harbinger	208832	209416	302	+	.	.
scaffold743	subtractBed	intrn	209430	209765	.	-	.	Parent=CGI_10008616;
	scaffold743	WUBlastX	DNA_Harbinger	209430	209765	85	+	.	.
scaffold747	subtractBed	intrn	93087	93125	.	-	.	Parent=CGI_10017060;
	scaffold747	TRF	Tandem_Repeat	93087	93125	69	+	.	.
scaffold747	subtractBed	intrn	133004	133278	.	-	.	Parent=CGI_10017062;
	scaffold747	TRF	Tandem_Repeat	133004	133278	451	+	.	.
scaffold747	subtractBed	intrn	134028	135006	.	-	.	Parent=CGI_10017062;
	scaffold747	TRF	Tandem_Repeat	134028	135006	1461	+	.	.
scaffold747	subtractBed	intrn	150356	150446	.	-	.	Parent=CGI_10017062;
	scaffold747	TRF	Tandem_Repeat	150356	150446	146	+	.	.
scaffold747	subtractBed	intrn	150412	150501	.	-	.	Parent=CGI_10017062;
	scaffold747	TRF	Tandem_Repeat	150412	150501	90	+	.	.
scaffold747	subtractBed	intrn	152125	152231	.	-	.	Parent=CGI_10017062;
	scaffold747	TRF	Tandem_Repeat	152125	152231	124	+	.	.
scaffold747	subtractBed	intrn	296006	296036	.	+	.	Parent=CGI_10017071;
	scaffold747	TRF	Tandem_Repeat	296006	296036	62	+	.	.
scaffold747	subtractBed	intrn	316170	316205	.	+	.	Parent=CGI_10017073;
	scaffold747	TRF	Tandem_Repeat	316170	316205	72	+	.	.
scaffold747	subtractBed	intrn	318916	318950	.	+	.	Parent=CGI_10017073;
	scaffold747	TRF	Tandem_Repeat	318916	318950	70	+	.	.
scaffold747	subtractBed	intrn	323871	324648	.	+	.	Parent=CGI_10017073;
	scaffold747	TRF	Tandem_Repeat	323871	324648	908	+	.	.
scaffold747	subtractBed	intrn	410841	411115	.	-	.	Parent=CGI_10017078;
	scaffold747	TRF	Tandem_Repeat	410841	411115	403	+	.	.
scaffold747	subtractBed	intrn	413633	413687	.	-	.	Parent=CGI_10017078;
	scaffold747	TRF	Tandem_Repeat	413633	413687	74	+	.	.
scaffold747	subtractBed	intrn	471049	471089	.	-	.	Parent=CGI_10017080;
	scaffold747	TRF	Tandem_Repeat	471049	471089	82	+	.	.
scaffold748	subtractBed	intrn	169350	170786	.	-	.	Parent=CGI_10012643;
	scaffold748	WUBlastX	DNA_IS4EU	169350	170786	832	-	.	.
scaffold748	subtractBed	intrn	180258	180299	.	+	.	Parent=CGI_10012644;
	scaffold748	TRF	Tandem_Repeat	180258	180299	50	+	.	.
scaffold748	subtractBed	intrn	182125	182571	.	+	.	Parent=CGI_10012644;
	scaffold748	TRF	Tandem_Repeat	182125	182571	743	+	.	.
scaffold748	subtractBed	intrn	213616	214208	.	+	.	Parent=CGI_10012647;
	scaffold748	TRF	Tandem_Repeat	213616	214208	1006	+	.	.
scaffold748	subtractBed	intrn	229667	229845	.	+	.	Parent=CGI_10012648;
	scaffold748	TRF	Tandem_Repeat	229667	229845	304	+	.	.
scaffold748	subtractBed	intrn	229861	230036	.	+	.	Parent=CGI_10012648;
	scaffold748	TRF	Tandem_Repeat	229861	230036	286	+	.	.
scaffold748	subtractBed	intrn	229336	229650	.	+	.	Parent=CGI_10012648;
	scaffold748	TRF	Tandem_Repeat	229336	229650	495	+	.	.
scaffold748	subtractBed	intrn	229336	230036	.	+	.	Parent=CGI_10012648;
	scaffold748	TRF	Tandem_Repeat	229336	230036	652	+	.	.
scaffold748	subtractBed	intrn	229336	230036	.	+	.	Parent=CGI_10012648;
	scaffold748	TRF	Tandem_Repeat	229336	230036	652	+	.	.
scaffold749	subtractBed	intrn	53718	54248	.	-	.	Parent=CGI_10002827;
	scaffold749	WUBlastX	LINE_RTE-X	53718	54248	110	-	.	.
scaffold749	subtractBed	intrn	53826	54248	.	-	.	Parent=CGI_10002827;
	scaffold749	WUBlastX	LINE_RTE-X	53826	54248	118	-	.	.
scaffold75	subtractBed	intrn	43381	43518	.	+	.	Parent=CGI_10005789;
	scaffold75	WUBlastX	DNA_Harbinger	43381	43518	89	-	.	.
scaffold75	subtractBed	intrn	43381	43677	.	+	.	Parent=CGI_10005789;
	scaffold75	WUBlastX	DNA_Harbinger	43381	43677	67	-	.	.
scaffold75	subtractBed	intrn	48769	48909	.	-	.	Parent=CGI_10005790;
	scaffold75	WUBlastX	DNA_TcMar-Marin	48769	48909	55	+	.	.
scaffold75	subtractBed	intrn	49597	50001	.	-	.	Parent=CGI_10005790;
	scaffold75	WUBlastX	DNA_TcMar-Marin	49597	50001	232	+	.	.
scaffold75	subtractBed	intrn	48912	49421	.	-	.	Parent=CGI_10005790;
	scaffold75	WUBlastX	DNA_TcMar-Marin	48912	49421	287	+	.	.
scaffold75	subtractBed	intrn	67159	67943	.	-	.	Parent=CGI_10005790;
	scaffold75	WUBlastX	LTR_Pao	67159	67995	70	-	.	.
scaffold75	subtractBed	intrn	66961	67545	.	-	.	Parent=CGI_10005790;
	scaffold75	WUBlastX	LTR_Pao	66961	67545	113	-	.	.
scaffold75	subtractBed	intrn	121965	122141	.	+	.	Parent=CGI_10005793;
	scaffold75	TRF	Tandem_Repeat	121965	122141	70	+	.	.
scaffold75	subtractBed	intrn	125096	125134	.	+	.	Parent=CGI_10005793;
	scaffold75	TRF	Tandem_Repeat	125096	125134	78	+	.	.
scaffold75	subtractBed	intrn	121965	122141	.	-	.	Parent=CGI_10005794;
	scaffold75	TRF	Tandem_Repeat	121965	122141	70	+	.	.
scaffold750	subtractBed	intrn	14731	15132	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_L2	14731	15132	32	+	.	.
scaffold750	subtractBed	intrn	15815	16009	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_L2	15815	16009	31	+	.	.
scaffold750	subtractBed	intrn	15013	15135	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_CR1-L2	15013	15135	40	+	.	.
scaffold750	subtractBed	intrn	15681	15878	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_L2	15681	15878	50	+	.	.
scaffold750	subtractBed	intrn	15138	15839	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_CR1-L2	15138	15839	190	+	.	.
scaffold750	subtractBed	intrn	14908	15126	.	+	.	Parent=CGI_10022205;
	scaffold750	WUBlastX	LINE_CR1	14908	15126	35	+	.	.
scaffold750	subtractBed	intrn	19989	20013	.	+	.	Parent=CGI_10022205;
	scaffold750	TRF	Tandem_Repeat	19989	20013	50	+	.	.
scaffold750	subtractBed	intrn	78242	78348	.	-	.	Parent=CGI_10022209;
	scaffold750	TRF	Tandem_Repeat	78242	78348	214	+	.	.
scaffold750	subtractBed	intrn	97189	97214	.	-	.	Parent=CGI_10022212;
	scaffold750	TRF	Tandem_Repeat	97189	97214	52	+	.	.
scaffold750	subtractBed	intrn	112112	112276	.	-	.	Parent=CGI_10022212;
	scaffold750	WUBlastX	DNA_IS4EU	112112	112276	39	+	.	.
scaffold750	subtractBed	intrn	112284	112466	.	-	.	Parent=CGI_10022212;
	scaffold750	WUBlastX	DNA_IS4EU	112284	112466	65	+	.	.
scaffold750	subtractBed	intrn	110096	110302	.	-	.	Parent=CGI_10022212;
	scaffold750	WUBlastX	DNA_IS4EU	110096	110302	68	+	.	.
scaffold750	subtractBed	intrn	143486	143531	.	-	.	Parent=CGI_10022214;
	scaffold750	TRF	Tandem_Repeat	143486	143531	92	+	.	.
scaffold750	subtractBed	intrn	146722	146959	.	-	.	Parent=CGI_10022214;
	scaffold750	TRF	Tandem_Repeat	146722	146959	198	+	.	.
scaffold750	subtractBed	intrn	146722	146959	.	-	.	Parent=CGI_10022214;
	scaffold750	TRF	Tandem_Repeat	146722	146959	197	+	.	.
scaffold750	subtractBed	intrn	149382	149424	.	-	.	Parent=CGI_10022214;
	scaffold750	TRF	Tandem_Repeat	149382	149424	86	+	.	.
scaffold750	subtractBed	intrn	222550	222643	.	-	.	Parent=CGI_10022216;
	scaffold750	TRF	Tandem_Repeat	222550	222643	65	+	.	.
scaffold750	subtractBed	intrn	270165	270266	.	+	.	Parent=CGI_10022219;
	scaffold750	TRF	Tandem_Repeat	270165	270266	64	+	.	.
scaffold750	subtractBed	intrn	493320	493350	.	-	.	Parent=CGI_10022220;
	scaffold750	TRF	Tandem_Repeat	493320	493350	55	+	.	.
scaffold750	subtractBed	intrn	542950	542997	.	-	.	Parent=CGI_10022222;
	scaffold750	TRF	Tandem_Repeat	542950	542997	96	+	.	.
scaffold750	subtractBed	intrn	573669	573718	.	+	.	Parent=CGI_10022224;
	scaffold750	TRF	Tandem_Repeat	573669	573718	91	+	.	.
scaffold750	subtractBed	intrn	577146	577266	.	+	.	Parent=CGI_10022224;
	scaffold750	TRF	Tandem_Repeat	577146	577266	215	+	.	.
scaffold750	subtractBed	intrn	587782	587855	.	-	.	Parent=CGI_10022225;
	scaffold750	TRF	Tandem_Repeat	587782	587855	123	+	.	.
scaffold750	subtractBed	intrn	587783	587852	.	-	.	Parent=CGI_10022225;
	scaffold750	TRF	Tandem_Repeat	587783	587852	70	+	.	.
scaffold750	subtractBed	intrn	627106	627162	.	+	.	Parent=CGI_10022228;
	scaffold750	TRF	Tandem_Repeat	627106	627162	105	+	.	.
scaffold750	subtractBed	intrn	631699	631747	.	+	.	Parent=CGI_10022229;
	scaffold750	TRF	Tandem_Repeat	631699	631747	98	+	.	.
scaffold750	subtractBed	intrn	637784	637860	.	+	.	Parent=CGI_10022229;
	scaffold750	TRF	Tandem_Repeat	637784	637860	154	+	.	.
scaffold750	subtractBed	intrn	639342	639412	.	+	.	Parent=CGI_10022229;
	scaffold750	TRF	Tandem_Repeat	639342	639412	142	+	.	.
scaffold750	subtractBed	intrn	646521	646729	.	-	.	Parent=CGI_10022230;
	scaffold750	TRF	Tandem_Repeat	646504	646729	280	+	.	.
scaffold751	subtractBed	intrn	8833	8866	.	-	.	Parent=CGI_10017378;
	scaffold751	TRF	Tandem_Repeat	8833	8866	59	+	.	.
scaffold751	subtractBed	intrn	77035	77067	.	-	.	Parent=CGI_10017381;
	scaffold751	TRF	Tandem_Repeat	77035	77067	66	+	.	.
scaffold751	subtractBed	intrn	111571	112425	.	-	.	Parent=CGI_10017384;
	scaffold751	TRF	Tandem_Repeat	111571	112425	1071	+	.	.
scaffold751	subtractBed	intrn	120513	120749	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	120513	120749	77	-	.	.
scaffold751	subtractBed	intrn	120789	121157	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	120789	121157	192	-	.	.
scaffold751	subtractBed	intrn	117713	118057	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	117476	118057	64	-	.	.
scaffold751	subtractBed	intrn	119902	120330	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	119902	120330	240	-	.	.
scaffold751	subtractBed	intrn	120645	121157	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	120645	121157	175	-	.	.
scaffold751	subtractBed	intrn	121105	121443	.	+	.	Parent=CGI_10017386;
	scaffold751	WUBlastX	LTR_Gypsy	121105	121443	140	-	.	.
scaffold751	subtractBed	intrn	155383	155913	.	-	.	Parent=CGI_10017388;
	scaffold751	WUBlastX	DNA_TcMar-Tc1	155383	155913	43	-	.	.
scaffold751	subtractBed	intrn	155791	156027	.	-	.	Parent=CGI_10017388;
	scaffold751	WUBlastX	DNA_TcMar-Tc1	155791	156027	27	-	.	.
scaffold751	subtractBed	intrn	156119	156199	.	-	.	Parent=CGI_10017388;
	scaffold751	WUBlastX	DNA_TcMar-Tc1	156119	156199	23	-	.	.
scaffold751	subtractBed	intrn	155647	155913	.	-	.	Parent=CGI_10017388;
	scaffold751	WUBlastX	DNA_TcMar-Tc1	155647	155913	60	-	.	.
scaffold751	subtractBed	intrn	246410	247060	.	-	.	Parent=CGI_10017389;
	scaffold751	WUBlastX	LINE_RTE-X	246410	247060	68	+	.	.
scaffold751	subtractBed	intrn	246410	246955	.	-	.	Parent=CGI_10017389;
	scaffold751	WUBlastX	LINE_RTE-X	246410	246955	104	+	.	.
scaffold751	subtractBed	intrn	282101	282135	.	-	.	Parent=CGI_10017394;
	scaffold751	TRF	Tandem_Repeat	282101	282135	70	+	.	.
scaffold751	subtractBed	intrn	306753	307884	.	+	.	Parent=CGI_10017395;
	scaffold751	TRF	Tandem_Repeat	306753	307884	1766	+	.	.
scaffold751	subtractBed	intrn	321810	321847	.	+	.	Parent=CGI_10017396;
	scaffold751	TRF	Tandem_Repeat	321810	321847	76	+	.	.
scaffold751	subtractBed	intrn	355300	355391	.	+	.	Parent=CGI_10017398;
	scaffold751	TRF	Tandem_Repeat	355300	355391	53	+	.	.
scaffold751	subtractBed	intrn	367713	367748	.	-	.	Parent=CGI_10017399;
	scaffold751	TRF	Tandem_Repeat	367713	367748	54	+	.	.
scaffold751	subtractBed	intrn	373390	373573	.	-	.	Parent=CGI_10017399;
	scaffold751	TRF	Tandem_Repeat	373390	373573	257	+	.	.
scaffold751	subtractBed	intrn	374855	375439	.	-	.	Parent=CGI_10017399;
	scaffold751	TRF	Tandem_Repeat	374855	375439	808	+	.	.
scaffold751	subtractBed	intrn	411577	411807	.	-	.	Parent=CGI_10017403;
	scaffold751	WUBlastX	LINE_L2	411577	411807	75	+	.	.
scaffold751	subtractBed	intrn	411538	411768	.	-	.	Parent=CGI_10017403;
	scaffold751	WUBlastX	LINE_L2	411538	411768	54	+	.	.
scaffold751	subtractBed	intrn	411625	411837	.	-	.	Parent=CGI_10017403;
	scaffold751	WUBlastX	LINE_L2	411625	411837	79	+	.	.
scaffold751	subtractBed	intrn	418854	419651	.	+	.	Parent=CGI_10017404;
	scaffold751	TRF	Tandem_Repeat	418854	419651	1166	+	.	.
scaffold751	subtractBed	intrn	450999	451037	.	-	.	Parent=CGI_10017406;
	scaffold751	TRF	Tandem_Repeat	450999	451037	78	+	.	.
scaffold752	subtractBed	intrn	15788	16276	.	+	.	Parent=CGI_10010038;
	scaffold752	WUBlastX	LINE_RTE-X	15788	16276	137	-	.	.
scaffold752	subtractBed	intrn	15591	15773	.	+	.	Parent=CGI_10010038;
	scaffold752	WUBlastX	LINE_RTE-X	15591	15773	41	-	.	.
scaffold752	subtractBed	intrn	18804	18884	.	+	.	Parent=CGI_10010038;
	scaffold752	TRF	Tandem_Repeat	18804	18884	90	+	.	.
scaffold752	subtractBed	intrn	19778	19837	.	+	.	Parent=CGI_10010038;
	scaffold752	TRF	Tandem_Repeat	19778	19837	50	+	.	.
scaffold752	subtractBed	intrn	15848	16393	.	+	.	Parent=CGI_10010038;
	scaffold752	WUBlastX	LINE_RTE-X	15848	16393	62	-	.	.
scaffold752	subtractBed	intrn	30302	30357	.	+	.	Parent=CGI_10010038;
	scaffold752	TRF	Tandem_Repeat	30302	30357	78	+	.	.
scaffold752	subtractBed	intrn	51909	51973	.	+	.	Parent=CGI_10010039;
	scaffold752	TRF	Tandem_Repeat	51909	51973	121	+	.	.
scaffold752	subtractBed	intrn	60359	62125	.	+	.	Parent=CGI_10010039;
	scaffold752	TRF	Tandem_Repeat	60359	62125	2507	+	.	.
scaffold752	subtractBed	intrn	61128	61227	.	+	.	Parent=CGI_10010039;
	scaffold752	TRF	Tandem_Repeat	61128	61227	68	+	.	.
scaffold752	subtractBed	intrn	62224	62290	.	+	.	Parent=CGI_10010039;
	scaffold752	TRF	Tandem_Repeat	62224	62290	57	+	.	.
scaffold752	subtractBed	intrn	63741	63795	.	+	.	Parent=CGI_10010039;
	scaffold752	TRF	Tandem_Repeat	63741	63795	56	+	.	.
scaffold752	subtractBed	intrn	154076	154106	.	-	.	Parent=CGI_10010041;
	scaffold752	TRF	Tandem_Repeat	154076	154106	62	+	.	.
scaffold753	subtractBed	intrn	1435	1494	.	+	.	Parent=CGI_10014193;
	scaffold753	TRF	Tandem_Repeat	1435	1494	84	+	.	.
scaffold753	subtractBed	intrn	51984	52337	.	+	.	Parent=CGI_10014195;
	scaffold753	WUBlastX	LINE_CR1	51984	52337	154	+	.	.
scaffold753	subtractBed	intrn	53500	53679	.	+	.	Parent=CGI_10014195;
	scaffold753	WUBlastX	LINE_L2	53500	53679	47	+	.	.
scaffold753	subtractBed	intrn	52047	52328	.	+	.	Parent=CGI_10014195;
	scaffold753	WUBlastX	LINE_CR1	52047	52328	210	+	.	.
scaffold753	subtractBed	intrn	51885	52325	.	+	.	Parent=CGI_10014195;
	scaffold753	WUBlastX	LINE_L1	51885	52325	54	+	.	.
scaffold753	subtractBed	intrn	53699	54055	.	+	.	Parent=CGI_10014195;
	scaffold753	WUBlastX	LINE_CR1-L2	53699	54055	81	+	.	.
scaffold753	subtractBed	intrn	60254	60840	.	+	.	Parent=CGI_10014195;
	scaffold753	TRF	Tandem_Repeat	60223	60840	844	+	.	.
scaffold753	subtractBed	intrn	63823	64117	.	+	.	Parent=CGI_10014195;
	scaffold753	TRF	Tandem_Repeat	63784	64117	524	+	.	.
scaffold753	subtractBed	intrn	64088	64498	.	+	.	Parent=CGI_10014195;
	scaffold753	TRF	Tandem_Repeat	64088	64498	467	+	.	.
scaffold753	subtractBed	intrn	64076	64498	.	+	.	Parent=CGI_10014195;
	scaffold753	TRF	Tandem_Repeat	64076	64498	514	+	.	.
scaffold753	subtractBed	intrn	66567	66915	.	+	.	Parent=CGI_10014195;
	scaffold753	TRF	Tandem_Repeat	66563	66915	591	+	.	.
scaffold753	subtractBed	intrn	131468	131771	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	131468	131771	408	+	.	.
scaffold753	subtractBed	intrn	132570	132998	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	132570	132998	516	+	.	.
scaffold753	subtractBed	intrn	132586	132983	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	132586	132983	510	+	.	.
scaffold753	subtractBed	intrn	139409	140033	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	139409	140033	950	+	.	.
scaffold753	subtractBed	intrn	142061	142108	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	142061	142108	96	+	.	.
scaffold753	subtractBed	intrn	143082	144385	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	143082	144385	2011	+	.	.
scaffold753	subtractBed	intrn	144555	144597	.	-	.	Parent=CGI_10014199;
	scaffold753	TRF	Tandem_Repeat	144555	144597	50	+	.	.
scaffold753	subtractBed	intrn	131468	131771	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	131468	131771	408	+	.	.
scaffold753	subtractBed	intrn	132570	132998	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	132570	132998	516	+	.	.
scaffold753	subtractBed	intrn	132586	132983	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	132586	132983	510	+	.	.
scaffold753	subtractBed	intrn	139409	140033	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	139409	140033	950	+	.	.
scaffold753	subtractBed	intrn	142061	142108	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	142061	142108	96	+	.	.
scaffold753	subtractBed	intrn	143082	144385	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	143082	144385	2011	+	.	.
scaffold753	subtractBed	intrn	144555	144597	.	+	.	Parent=CGI_10014200;
	scaffold753	TRF	Tandem_Repeat	144555	144597	50	+	.	.
scaffold753	subtractBed	intrn	165546	165608	.	+	.	Parent=CGI_10014201;
	scaffold753	TRF	Tandem_Repeat	165546	165608	126	+	.	.
scaffold753	subtractBed	intrn	168195	168251	.	+	.	Parent=CGI_10014201;
	scaffold753	TRF	Tandem_Repeat	168195	168251	98	+	.	.
scaffold753	subtractBed	intrn	175963	176003	.	+	.	Parent=CGI_10014201;
	scaffold753	TRF	Tandem_Repeat	175963	176003	82	+	.	.
scaffold753	subtractBed	intrn	184752	184789	.	-	.	Parent=CGI_10014202;
	scaffold753	TRF	Tandem_Repeat	184752	184789	58	+	.	.
scaffold753	subtractBed	intrn	216259	216373	.	+	.	Parent=CGI_10014205;
	scaffold753	TRF	Tandem_Repeat	216259	216373	106	+	.	.
scaffold753	subtractBed	intrn	305293	305293	.	+	.	Parent=CGI_10014209;
	scaffold753	WUBlastX	DNA_hAT	305120	305293	53	+	.	.
scaffold753	subtractBed	intrn	305695	305714	.	+	.	Parent=CGI_10014209;
	scaffold753	WUBlastX	DNA_hAT	305695	306210	57	+	.	.
scaffold753	subtractBed	intrn	313191	316439	.	+	.	Parent=CGI_10014210;
	scaffold753	WUBlastX	LINE_RTE-X	313191	316439	986	-	.	.
scaffold753	subtractBed	intrn	316608	317237	.	+	.	Parent=CGI_10014210;
	scaffold753	WUBlastX	LINE_L1	316608	317237	244	-	.	.
scaffold753	subtractBed	intrn	316632	317348	.	+	.	Parent=CGI_10014210;
	scaffold753	WUBlastX	LINE_L1	316632	317348	54	-	.	.
scaffold753	subtractBed	intrn	313050	313820	.	+	.	Parent=CGI_10014210;
	scaffold753	WUBlastX	LINE_RTE-X	313050	313820	175	-	.	.
scaffold753	subtractBed	intrn	316110	316721	.	+	.	Parent=CGI_10014210;
	scaffold753	WUBlastX	LINE_CR1	316110	316721	33	-	.	.
scaffold753	subtractBed	intrn	320986	321023	.	+	.	Parent=CGI_10014210;
	scaffold753	TRF	Tandem_Repeat	320986	321023	76	+	.	.
scaffold753	subtractBed	intrn	334285	334321	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	334285	334321	53	+	.	.
scaffold753	subtractBed	intrn	334606	335058	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	334606	335058	519	+	.	.
scaffold753	subtractBed	intrn	334607	335058	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	334607	335058	552	+	.	.
scaffold753	subtractBed	intrn	334607	335058	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	334607	335058	602	+	.	.
scaffold753	subtractBed	intrn	335691	335887	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	335691	335887	250	+	.	.
scaffold753	subtractBed	intrn	335691	335886	.	+	.	Parent=CGI_10014211;
	scaffold753	TRF	Tandem_Repeat	335691	335886	239	+	.	.
scaffold753	subtractBed	intrn	344951	345012	.	+	.	Parent=CGI_10014212;
	scaffold753	TRF	Tandem_Repeat	344951	345012	90	+	.	.
scaffold753	subtractBed	intrn	346233	347483	.	+	.	Parent=CGI_10014212;
	scaffold753	TRF	Tandem_Repeat	346233	347483	1746	+	.	.
scaffold753	subtractBed	intrn	364806	365089	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	364806	365089	523	+	.	.
scaffold753	subtractBed	intrn	366867	367050	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	366867	367050	206	+	.	.
scaffold753	subtractBed	intrn	367984	368167	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	367984	368167	206	+	.	.
scaffold753	subtractBed	intrn	369119	370148	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	369119	370148	1366	+	.	.
scaffold753	subtractBed	intrn	369119	370141	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	369119	370141	1283	+	.	.
scaffold753	subtractBed	intrn	369119	370141	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	369119	370141	1328	+	.	.
scaffold753	subtractBed	intrn	370855	371209	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	370855	371209	487	+	.	.
scaffold753	subtractBed	intrn	372301	372621	.	+	.	Parent=CGI_10014214;
	scaffold753	TRF	Tandem_Repeat	372301	372632	400	+	.	.
scaffold754	subtractBed	intrn	41018	41061	.	+	.	Parent=CGI_10014062;
	scaffold754	TRF	Tandem_Repeat	41018	41061	88	+	.	.
scaffold754	subtractBed	intrn	36265	36332	.	+	.	Parent=CGI_10014062;
	scaffold754	WUBlastX	DNA_Academ	35415	36332	374	+	.	.
scaffold754	subtractBed	intrn	45063	45380	.	+	.	Parent=CGI_10014062;
	scaffold754	WUBlastX	LINE_L2	45063	45380	111	+	.	.
scaffold754	subtractBed	intrn	44092	45081	.	+	.	Parent=CGI_10014062;
	scaffold754	WUBlastX	LINE_L2	44092	45081	360	+	.	.
scaffold754	subtractBed	intrn	46790	46928	.	+	.	Parent=CGI_10014062;
	scaffold754	WUBlastX	LINE_L2	46790	47728	220	+	.	.
scaffold754	subtractBed	intrn	141008	141676	.	-	.	Parent=CGI_10014067;
	scaffold754	WUBlastX	DNA_IS4EU	141008	141676	47	+	.	.
scaffold754	subtractBed	intrn	140686	140859	.	-	.	Parent=CGI_10014067;
	scaffold754	WUBlastX	DNA_IS4EU	140686	140859	45	+	.	.
scaffold754	subtractBed	intrn	140996	141523	.	-	.	Parent=CGI_10014067;
	scaffold754	WUBlastX	DNA_IS4EU	140996	141523	173	+	.	.
scaffold754	subtractBed	intrn	140903	141508	.	-	.	Parent=CGI_10014067;
	scaffold754	WUBlastX	DNA_Kolobok-IS4	140903	141508	157	+	.	.
scaffold754	subtractBed	intrn	155237	155285	.	-	.	Parent=CGI_10014069;
	scaffold754	TRF	Tandem_Repeat	155237	155285	98	+	.	.
scaffold754	subtractBed	intrn	165761	165795	.	-	.	Parent=CGI_10014071;
	scaffold754	TRF	Tandem_Repeat	165761	165795	70	+	.	.
scaffold754	subtractBed	intrn	174802	174833	.	-	.	Parent=CGI_10014072;
	scaffold754	TRF	Tandem_Repeat	174802	174833	64	+	.	.
scaffold754	subtractBed	intrn	183533	183585	.	-	.	Parent=CGI_10014073;
	scaffold754	TRF	Tandem_Repeat	183533	183585	76	+	.	.
scaffold754	subtractBed	intrn	183539	183586	.	-	.	Parent=CGI_10014073;
	scaffold754	TRF	Tandem_Repeat	183539	183586	60	+	.	.
scaffold754	subtractBed	intrn	207128	207197	.	+	.	Parent=CGI_10014075;
	scaffold754	TRF	Tandem_Repeat	207128	207197	140	+	.	.
scaffold754	subtractBed	intrn	298119	298219	.	+	.	Parent=CGI_10014079;
	scaffold754	TRF	Tandem_Repeat	298119	298219	159	+	.	.
scaffold754	subtractBed	intrn	314559	317626	.	+	.	Parent=CGI_10014080;
	scaffold754	TRF	Tandem_Repeat	314559	317626	2327	+	.	.
scaffold754	subtractBed	intrn	340172	340225	.	-	.	Parent=CGI_10014081;
	scaffold754	TRF	Tandem_Repeat	340172	340225	108	+	.	.
scaffold754	subtractBed	intrn	343824	343858	.	-	.	Parent=CGI_10014081;
	scaffold754	TRF	Tandem_Repeat	343824	343858	61	+	.	.
scaffold754	subtractBed	intrn	344999	345048	.	-	.	Parent=CGI_10014081;
	scaffold754	TRF	Tandem_Repeat	344999	345048	64	+	.	.
scaffold754	subtractBed	intrn	344998	345041	.	-	.	Parent=CGI_10014081;
	scaffold754	TRF	Tandem_Repeat	344998	345041	52	+	.	.
scaffold754	subtractBed	intrn	345218	346228	.	-	.	Parent=CGI_10014081;
	scaffold754	TRF	Tandem_Repeat	345218	346228	1559	+	.	.
scaffold754	subtractBed	intrn	384371	384408	.	-	.	Parent=CGI_10014085;
	scaffold754	TRF	Tandem_Repeat	384371	384408	76	+	.	.
scaffold756	subtractBed	intrn	35480	35525	.	+	.	Parent=CGI_10016450;
	scaffold756	TRF	Tandem_Repeat	35480	35525	51	+	.	.
scaffold756	subtractBed	intrn	40008	40056	.	+	.	Parent=CGI_10016450;
	scaffold756	TRF	Tandem_Repeat	40008	40056	98	+	.	.
scaffold756	subtractBed	intrn	73613	73959	.	-	.	Parent=CGI_10016453;
	scaffold756	TRF	Tandem_Repeat	73613	73959	398	+	.	.
scaffold756	subtractBed	intrn	74624	74926	.	-	.	Parent=CGI_10016453;
	scaffold756	TRF	Tandem_Repeat	74624	74926	336	+	.	.
scaffold756	subtractBed	intrn	74624	74926	.	-	.	Parent=CGI_10016453;
	scaffold756	TRF	Tandem_Repeat	74624	74926	318	+	.	.
scaffold756	subtractBed	intrn	74624	74928	.	-	.	Parent=CGI_10016453;
	scaffold756	TRF	Tandem_Repeat	74624	74928	380	+	.	.
scaffold756	subtractBed	intrn	76418	76583	.	-	.	Parent=CGI_10016453;
	scaffold756	TRF	Tandem_Repeat	76418	76583	219	+	.	.
scaffold756	subtractBed	intrn	87146	87186	.	-	.	Parent=CGI_10016455;
	scaffold756	TRF	Tandem_Repeat	87146	87186	82	+	.	.
scaffold756	subtractBed	intrn	88330	88373	.	-	.	Parent=CGI_10016455;
	scaffold756	TRF	Tandem_Repeat	88330	88373	88	+	.	.
scaffold756	subtractBed	intrn	187376	187400	.	+	.	Parent=CGI_10016458;
	scaffold756	TRF	Tandem_Repeat	187376	187400	50	+	.	.
scaffold756	subtractBed	intrn	187554	187619	.	+	.	Parent=CGI_10016458;
	scaffold756	TRF	Tandem_Repeat	187554	187619	125	+	.	.
scaffold756	subtractBed	intrn	180315	180770	.	+	.	Parent=CGI_10016458;
	scaffold756	WUBlastX	LTR_Pao	180315	180770	170	-	.	.
scaffold756	subtractBed	intrn	180333	180701	.	+	.	Parent=CGI_10016458;
	scaffold756	WUBlastX	LTR_Pao	180333	180701	388	-	.	.
scaffold756	subtractBed	intrn	179720	180355	.	+	.	Parent=CGI_10016458;
	scaffold756	WUBlastX	LTR_Pao	179720	180355	683	-	.	.
scaffold756	subtractBed	intrn	205803	205852	.	+	.	Parent=CGI_10016460;
	scaffold756	TRF	Tandem_Repeat	205803	205852	100	+	.	.
scaffold756	subtractBed	intrn	207751	208094	.	+	.	Parent=CGI_10016460;
	scaffold756	TRF	Tandem_Repeat	207751	208094	634	+	.	.
scaffold756	subtractBed	intrn	209736	210034	.	+	.	Parent=CGI_10016460;
	scaffold756	TRF	Tandem_Repeat	209736	210034	319	+	.	.
scaffold756	subtractBed	intrn	209736	210024	.	+	.	Parent=CGI_10016460;
	scaffold756	TRF	Tandem_Repeat	209736	210024	342	+	.	.
scaffold756	subtractBed	intrn	221069	221167	.	+	.	Parent=CGI_10016460;
	scaffold756	TRF	Tandem_Repeat	221069	221167	76	+	.	.
scaffold756	subtractBed	intrn	238118	238217	.	+	.	Parent=CGI_10016461;
	scaffold756	TRF	Tandem_Repeat	238118	238217	97	+	.	.
scaffold756	subtractBed	intrn	242974	243021	.	+	.	Parent=CGI_10016461;
	scaffold756	TRF	Tandem_Repeat	242974	243021	78	+	.	.
scaffold756	subtractBed	intrn	241208	241459	.	+	.	Parent=CGI_10016461;
	scaffold756	WUBlastX	DNA_Maverick	241208	241459	75	+	.	.
scaffold756	subtractBed	intrn	241208	241513	.	+	.	Parent=CGI_10016461;
	scaffold756	WUBlastX	DNA_Maverick	241208	241513	70	+	.	.
scaffold756	subtractBed	intrn	301653	301736	.	-	.	Parent=CGI_10016463;
	scaffold756	TRF	Tandem_Repeat	301653	301736	161	+	.	.
scaffold756	subtractBed	intrn	310277	310368	.	-	.	Parent=CGI_10016463;
	scaffold756	TRF	Tandem_Repeat	310277	310368	89	+	.	.
scaffold756	subtractBed	intrn	310447	310604	.	-	.	Parent=CGI_10016463;
	scaffold756	TRF	Tandem_Repeat	310447	310604	160	+	.	.
scaffold756	subtractBed	intrn	310834	310927	.	-	.	Parent=CGI_10016463;
	scaffold756	TRF	Tandem_Repeat	310834	310927	91	+	.	.
scaffold756	subtractBed	intrn	343080	343475	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	DNA_IS4EU	343080	343475	91	-	.	.
scaffold756	subtractBed	intrn	342731	342898	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	DNA_IS4EU	342731	342898	44	-	.	.
scaffold756	subtractBed	intrn	343080	343727	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	DNA_IS4EU	343080	343727	62	-	.	.
scaffold756	subtractBed	intrn	343020	343568	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	DNA_Kolobok-IS4	343020	343568	67	-	.	.
scaffold756	subtractBed	intrn	353009	353221	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	LTR_Gypsy	353009	354403	277	-	.	.
scaffold756	subtractBed	intrn	352911	353207	.	-	.	Parent=CGI_10016464;
	scaffold756	WUBlastX	LTR_Gypsy	352911	353207	28	-	.	.
scaffold756	subtractBed	intrn	418842	420022	.	-	.	Parent=CGI_10016466;
	scaffold756	TRF	Tandem_Repeat	418842	420022	1280	+	.	.
scaffold756	subtractBed	intrn	421292	421531	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	421292	421531	32	-	.	.
scaffold756	subtractBed	intrn	421536	422210	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	421536	422210	308	-	.	.
scaffold756	subtractBed	intrn	422207	422722	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	422207	422722	313	-	.	.
scaffold756	subtractBed	intrn	422676	423317	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	422676	423317	373	-	.	.
scaffold756	subtractBed	intrn	423338	423742	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	423338	423742	143	-	.	.
scaffold756	subtractBed	intrn	423332	423931	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	423332	423931	27	-	.	.
scaffold756	subtractBed	intrn	423314	423811	.	-	.	Parent=CGI_10016466;
	scaffold756	WUBlastX	LINE_L2	423314	423811	36	-	.	.
scaffold756	subtractBed	intrn	435625	435715	.	-	.	Parent=CGI_10016467;
	scaffold756	TRF	Tandem_Repeat	435625	435715	146	+	.	.
scaffold756	subtractBed	intrn	437215	437378	.	-	.	Parent=CGI_10016467;
	scaffold756	TRF	Tandem_Repeat	437215	437378	127	+	.	.
scaffold756	subtractBed	intrn	437214	437332	.	-	.	Parent=CGI_10016467;
	scaffold756	TRF	Tandem_Repeat	437214	437332	110	+	.	.
scaffold756	subtractBed	intrn	457111	457155	.	-	.	Parent=CGI_10016467;
	scaffold756	TRF	Tandem_Repeat	457111	457155	72	+	.	.
scaffold756	subtractBed	intrn	456448	456489	.	-	.	Parent=CGI_10016467;
	scaffold756	WUBlastX	LINE_I	456448	456489	23	-	.	.
scaffold756	subtractBed	intrn	454387	455967	.	-	.	Parent=CGI_10016467;
	scaffold756	WUBlastX	LINE_L2	454387	455967	936	-	.	.
scaffold759	subtractBed	intrn	34508	34536	.	+	.	Parent=CGI_10010773;
	scaffold759	TRF	Tandem_Repeat	34508	34536	58	+	.	.
scaffold759	subtractBed	intrn	38417	38636	.	+	.	Parent=CGI_10010773;
	scaffold759	TRF	Tandem_Repeat	38417	38636	69	+	.	.
scaffold759	subtractBed	intrn	101799	102596	.	+	.	Parent=CGI_10010775;
	scaffold759	WUBlastX	LTR_Gypsy-Cigr	101799	102596	62	+	.	.
scaffold759	subtractBed	intrn	101958	102632	.	+	.	Parent=CGI_10010775;
	scaffold759	WUBlastX	LTR_Gypsy	101958	102632	68	+	.	.
scaffold759	subtractBed	intrn	102138	102866	.	+	.	Parent=CGI_10010775;
	scaffold759	WUBlastX	LTR_Gypsy	102138	102866	123	+	.	.
scaffold759	subtractBed	intrn	212694	213293	.	+	.	Parent=CGI_10010779;
	scaffold759	TRF	Tandem_Repeat	212694	213293	745	+	.	.
scaffold759	subtractBed	intrn	224206	224250	.	+	.	Parent=CGI_10010779;
	scaffold759	TRF	Tandem_Repeat	224206	224250	90	+	.	.
scaffold759	subtractBed	intrn	212694	213293	.	-	.	Parent=CGI_10010780;
	scaffold759	TRF	Tandem_Repeat	212694	213293	745	+	.	.
scaffold759	subtractBed	intrn	245043	245088	.	-	.	Parent=CGI_10010781;
	scaffold759	TRF	Tandem_Repeat	245043	245088	92	+	.	.
scaffold759	subtractBed	intrn	246690	246743	.	-	.	Parent=CGI_10010781;
	scaffold759	TRF	Tandem_Repeat	246690	246743	56	+	.	.
scaffold759	subtractBed	intrn	247993	248406	.	-	.	Parent=CGI_10010781;
	scaffold759	WUBlastX	LINE_RTE-X	247993	248406	131	-	.	.
scaffold759	subtractBed	intrn	247867	248406	.	-	.	Parent=CGI_10010781;
	scaffold759	WUBlastX	LINE_RTE-X	247867	248406	105	-	.	.
scaffold759	subtractBed	intrn	250023	250060	.	-	.	Parent=CGI_10010781;
	scaffold759	TRF	Tandem_Repeat	250023	250060	76	+	.	.
scaffold759	subtractBed	intrn	251775	251826	.	-	.	Parent=CGI_10010781;
	scaffold759	TRF	Tandem_Repeat	251775	251826	104	+	.	.
scaffold76	subtractBed	intrn	56598	56684	.	-	.	Parent=CGI_10009398;
	scaffold76	TRF	Tandem_Repeat	56598	56684	79	+	.	.
scaffold76	subtractBed	intrn	57898	57941	.	-	.	Parent=CGI_10009398;
	scaffold76	TRF	Tandem_Repeat	57898	57941	88	+	.	.
scaffold76	subtractBed	intrn	61216	62099	.	-	.	Parent=CGI_10009398;
	scaffold76	TRF	Tandem_Repeat	61216	62099	1140	+	.	.
scaffold76	subtractBed	intrn	62837	62896	.	-	.	Parent=CGI_10009398;
	scaffold76	TRF	Tandem_Repeat	62837	62896	102	+	.	.
scaffold76	subtractBed	intrn	62962	63027	.	-	.	Parent=CGI_10009398;
	scaffold76	TRF	Tandem_Repeat	62962	63027	71	+	.	.
scaffold76	subtractBed	intrn	115867	115920	.	+	.	Parent=CGI_10009399;
	scaffold76	TRF	Tandem_Repeat	115867	115920	99	+	.	.
scaffold76	subtractBed	intrn	118975	119020	.	-	.	Parent=CGI_10009400;
	scaffold76	TRF	Tandem_Repeat	118975	119020	74	+	.	.
scaffold76	subtractBed	intrn	125996	126112	.	-	.	Parent=CGI_10009400;
	scaffold76	TRF	Tandem_Repeat	125996	126112	80	+	.	.
scaffold76	subtractBed	intrn	131034	132041	.	-	.	Parent=CGI_10009400;
	scaffold76	TRF	Tandem_Repeat	131034	132041	1152	+	.	.
scaffold76	subtractBed	intrn	183471	183527	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	183471	183527	53	+	.	.
scaffold76	subtractBed	intrn	184430	184467	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	184430	184467	76	+	.	.
scaffold76	subtractBed	intrn	187052	187098	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	187052	187098	94	+	.	.
scaffold76	subtractBed	intrn	190434	190489	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	190434	190489	58	+	.	.
scaffold76	subtractBed	intrn	190410	190486	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	190410	190486	57	+	.	.
scaffold76	subtractBed	intrn	200763	200808	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	200763	200808	92	+	.	.
scaffold76	subtractBed	intrn	204225	204260	.	+	.	Parent=CGI_10009404;
	scaffold76	TRF	Tandem_Repeat	204225	204260	63	+	.	.
scaffold76	subtractBed	intrn	223996	224055	.	-	.	Parent=CGI_10009406;
	scaffold76	TRF	Tandem_Repeat	223996	224055	120	+	.	.
scaffold76	subtractBed	intrn	227718	227993	.	-	.	Parent=CGI_10009406;
	scaffold76	WUBlastX	LINE_RTE-X	227718	227993	40	+	.	.
scaffold76	subtractBed	intrn	227718	227921	.	-	.	Parent=CGI_10009406;
	scaffold76	WUBlastX	LINE_RTE-X	227718	227921	52	+	.	.
scaffold76	subtractBed	intrn	225684	225980	.	-	.	Parent=CGI_10009406;
	scaffold76	WUBlastX	LINE_RTE-X	225684	225980	25	+	.	.
scaffold76	subtractBed	intrn	227550	227885	.	-	.	Parent=CGI_10009406;
	scaffold76	WUBlastX	LINE_RTE-X	227550	227885	65	+	.	.
scaffold760	subtractBed	intrn	60815	60848	.	+	.	Parent=CGI_10023972;
	scaffold760	TRF	Tandem_Repeat	60815	60848	61	+	.	.
scaffold760	subtractBed	intrn	120823	120876	.	+	.	Parent=CGI_10023976;
	scaffold760	TRF	Tandem_Repeat	120823	120876	108	+	.	.
scaffold760	subtractBed	intrn	125947	126141	.	+	.	Parent=CGI_10023976;
	scaffold760	TRF	Tandem_Repeat	125947	126141	138	+	.	.
scaffold760	subtractBed	intrn	131022	131063	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1	131022	131063	22	+	.	.
scaffold760	subtractBed	intrn	127617	128279	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1-Tx1	127617	128279	67	+	.	.
scaffold760	subtractBed	intrn	127785	130661	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1-Tx1	127785	130661	1616	+	.	.
scaffold760	subtractBed	intrn	127593	127637	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_CR1	127593	127637	20	+	.	.
scaffold760	subtractBed	intrn	130774	130974	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1-Tx1	130774	130974	75	+	.	.
scaffold760	subtractBed	intrn	130657	130962	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1-Tx1	130657	130962	57	+	.	.
scaffold760	subtractBed	intrn	130983	131195	.	+	.	Parent=CGI_10023976;
	scaffold760	WUBlastX	LINE_L1-Tx1	130983	131195	21	+	.	.
scaffold760	subtractBed	intrn	138625	139008	.	+	.	Parent=CGI_10023976;
	scaffold760	TRF	Tandem_Repeat	138625	139008	529	+	.	.
scaffold760	subtractBed	intrn	154234	154661	.	-	.	Parent=CGI_10023977;
	scaffold760	TRF	Tandem_Repeat	154234	154661	662	+	.	.
scaffold760	subtractBed	intrn	164722	164747	.	-	.	Parent=CGI_10023977;
	scaffold760	TRF	Tandem_Repeat	164722	164747	52	+	.	.
scaffold760	subtractBed	intrn	256175	257070	.	-	.	Parent=CGI_10023980;
	scaffold760	TRF	Tandem_Repeat	256175	257070	911	+	.	.
scaffold760	subtractBed	intrn	257815	258339	.	-	.	Parent=CGI_10023980;
	scaffold760	TRF	Tandem_Repeat	257815	258339	953	+	.	.
scaffold760	subtractBed	intrn	260024	260243	.	-	.	Parent=CGI_10023980;
	scaffold760	TRF	Tandem_Repeat	260024	260243	115	+	.	.
scaffold760	subtractBed	intrn	260172	260258	.	-	.	Parent=CGI_10023980;
	scaffold760	TRF	Tandem_Repeat	260172	260258	81	+	.	.
scaffold760	subtractBed	intrn	270388	270522	.	+	.	Parent=CGI_10023981;
	scaffold760	TRF	Tandem_Repeat	270388	270522	252	+	.	.
scaffold760	subtractBed	intrn	274029	274080	.	+	.	Parent=CGI_10023981;
	scaffold760	TRF	Tandem_Repeat	274029	274080	104	+	.	.
scaffold760	subtractBed	intrn	303341	303712	.	+	.	Parent=CGI_10023983;
	scaffold760	TRF	Tandem_Repeat	303341	303712	674	+	.	.
scaffold760	subtractBed	intrn	309567	309594	.	+	.	Parent=CGI_10023983;
	scaffold760	TRF	Tandem_Repeat	309567	309594	56	+	.	.
scaffold760	subtractBed	intrn	324973	325003	.	+	.	Parent=CGI_10023983;
	scaffold760	TRF	Tandem_Repeat	324973	325003	62	+	.	.
scaffold760	subtractBed	intrn	326133	326209	.	+	.	Parent=CGI_10023983;
	scaffold760	TRF	Tandem_Repeat	326133	326209	154	+	.	.
scaffold760	subtractBed	intrn	326237	326261	.	+	.	Parent=CGI_10023983;
	scaffold760	TRF	Tandem_Repeat	326237	326261	50	+	.	.
scaffold760	subtractBed	intrn	390159	390205	.	-	.	Parent=CGI_10023987;
	scaffold760	TRF	Tandem_Repeat	390159	390205	94	+	.	.
scaffold760	subtractBed	intrn	396080	396143	.	-	.	Parent=CGI_10023987;
	scaffold760	TRF	Tandem_Repeat	396080	396143	128	+	.	.
scaffold760	subtractBed	intrn	416402	416615	.	+	.	Parent=CGI_10023988;
	scaffold760	TRF	Tandem_Repeat	416402	416615	374	+	.	.
scaffold760	subtractBed	intrn	466020	466067	.	+	.	Parent=CGI_10023990;
	scaffold760	TRF	Tandem_Repeat	466020	466067	60	+	.	.
scaffold760	subtractBed	intrn	476412	476482	.	+	.	Parent=CGI_10023990;
	scaffold760	TRF	Tandem_Repeat	476412	476482	142	+	.	.
scaffold760	subtractBed	intrn	480525	480738	.	+	.	Parent=CGI_10023990;
	scaffold760	TRF	Tandem_Repeat	480525	480738	135	+	.	.
scaffold760	subtractBed	intrn	480580	480813	.	+	.	Parent=CGI_10023990;
	scaffold760	TRF	Tandem_Repeat	480580	480813	255	+	.	.
scaffold760	subtractBed	intrn	481026	481085	.	+	.	Parent=CGI_10023990;
	scaffold760	TRF	Tandem_Repeat	481026	481085	113	+	.	.
scaffold760	subtractBed	intrn	528658	528754	.	+	.	Parent=CGI_10023991;
	scaffold760	TRF	Tandem_Repeat	528658	528754	185	+	.	.
scaffold760	subtractBed	intrn	549503	549547	.	+	.	Parent=CGI_10023993;
	scaffold760	TRF	Tandem_Repeat	549503	549547	90	+	.	.
scaffold760	subtractBed	intrn	553940	553976	.	+	.	Parent=CGI_10023993;
	scaffold760	TRF	Tandem_Repeat	553940	553976	74	+	.	.
scaffold760	subtractBed	intrn	553940	553976	.	-	.	Parent=CGI_10023994;
	scaffold760	TRF	Tandem_Repeat	553940	553976	74	+	.	.
scaffold760	subtractBed	intrn	556400	556507	.	-	.	Parent=CGI_10023994;
	scaffold760	TRF	Tandem_Repeat	556400	556507	162	+	.	.
scaffold760	subtractBed	intrn	556400	556507	.	+	.	Parent=CGI_10023995;
	scaffold760	TRF	Tandem_Repeat	556400	556507	162	+	.	.
scaffold760	subtractBed	intrn	590891	591547	.	+	.	Parent=CGI_10023998;
	scaffold760	TRF	Tandem_Repeat	590891	591547	141	+	.	.
scaffold760	subtractBed	intrn	590997	591500	.	+	.	Parent=CGI_10023998;
	scaffold760	TRF	Tandem_Repeat	590997	591500	600	+	.	.
scaffold760	subtractBed	intrn	591314	591547	.	+	.	Parent=CGI_10023998;
	scaffold760	TRF	Tandem_Repeat	591314	591547	220	+	.	.
scaffold760	subtractBed	intrn	595377	595457	.	+	.	Parent=CGI_10023998;
	scaffold760	TRF	Tandem_Repeat	595377	595457	155	+	.	.
scaffold760	subtractBed	intrn	595699	595739	.	+	.	Parent=CGI_10023998;
	scaffold760	TRF	Tandem_Repeat	595699	595739	73	+	.	.
scaffold760	subtractBed	intrn	650567	650612	.	+	.	Parent=CGI_10024000;
	scaffold760	TRF	Tandem_Repeat	650567	650612	92	+	.	.
scaffold760	subtractBed	intrn	654411	654459	.	+	.	Parent=CGI_10024000;
	scaffold760	TRF	Tandem_Repeat	654411	654459	98	+	.	.
scaffold760	subtractBed	intrn	661294	661318	.	+	.	Parent=CGI_10024000;
	scaffold760	TRF	Tandem_Repeat	661294	661318	50	+	.	.
scaffold760	subtractBed	intrn	675456	675642	.	-	.	Parent=CGI_10024001;
	scaffold760	TRF	Tandem_Repeat	675456	675642	203	+	.	.
scaffold760	subtractBed	intrn	692574	692715	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	692574	692715	241	+	.	.
scaffold760	subtractBed	intrn	694379	694421	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	694379	694421	86	+	.	.
scaffold760	subtractBed	intrn	698867	698997	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	698867	698997	199	+	.	.
scaffold760	subtractBed	intrn	701788	701820	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	701788	701820	66	+	.	.
scaffold760	subtractBed	intrn	703520	703553	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	703520	703553	68	+	.	.
scaffold760	subtractBed	intrn	706042	706097	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	706042	706097	112	+	.	.
scaffold760	subtractBed	intrn	708877	710096	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	708877	710096	1803	+	.	.
scaffold760	subtractBed	intrn	719884	719951	.	-	.	Parent=CGI_10024004;
	scaffold760	TRF	Tandem_Repeat	719884	719951	127	+	.	.
scaffold760	subtractBed	intrn	729195	729242	.	+	.	Parent=CGI_10024006;
	scaffold760	TRF	Tandem_Repeat	729195	729242	96	+	.	.
scaffold760	subtractBed	intrn	753779	754693	.	+	.	Parent=CGI_10024008;
	scaffold760	TRF	Tandem_Repeat	753779	754693	1662	+	.	.
scaffold760	subtractBed	intrn	762494	763530	.	+	.	Parent=CGI_10024009;
	scaffold760	TRF	Tandem_Repeat	762494	763530	1462	+	.	.
scaffold760	subtractBed	intrn	772879	772905	.	-	.	Parent=CGI_10024010;
	scaffold760	TRF	Tandem_Repeat	772879	772905	54	+	.	.
scaffold760	subtractBed	intrn	773216	773551	.	-	.	Parent=CGI_10024010;
	scaffold760	TRF	Tandem_Repeat	773216	773551	460	+	.	.
scaffold760	subtractBed	intrn	794070	794116	.	+	.	Parent=CGI_10024012;
	scaffold760	TRF	Tandem_Repeat	794070	794116	58	+	.	.
scaffold760	subtractBed	intrn	794951	795085	.	+	.	Parent=CGI_10024012;
	scaffold760	WUBlastX	DNA_hAT	794793	795287	48	+	.	.
scaffold760	subtractBed	intrn	795287	795287	.	+	.	Parent=CGI_10024012;
	scaffold760	WUBlastX	DNA_hAT	794793	795287	48	+	.	.
scaffold760	subtractBed	intrn	799116	799787	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy-Cigr	799116	799787	261	-	.	.
scaffold760	subtractBed	intrn	800321	800650	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	800321	800650	68	-	.	.
scaffold760	subtractBed	intrn	800252	800416	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	800252	800416	58	-	.	.
scaffold760	subtractBed	intrn	801393	801725	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	801393	801725	95	-	.	.
scaffold760	subtractBed	intrn	801426	801824	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	801426	801824	37	-	.	.
scaffold760	subtractBed	intrn	801348	801743	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	801348	801743	93	-	.	.
scaffold760	subtractBed	intrn	800303	800416	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	800303	800416	74	-	.	.
scaffold760	subtractBed	intrn	799272	799781	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy-Cigr	799272	799781	353	-	.	.
scaffold760	subtractBed	intrn	800291	800710	.	-	.	Parent=CGI_10024013;
	scaffold760	WUBlastX	LTR_Gypsy	800291	800710	61	-	.	.
scaffold760	subtractBed	intrn	812801	813084	.	+	.	Parent=CGI_10024016;
	scaffold760	WUBlastX	DNA_hAT	812593	813084	80	+	.	.
scaffold760	subtractBed	intrn	826489	826615	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	826489	826615	106	+	.	.
scaffold760	subtractBed	intrn	826501	826641	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	826501	826641	153	+	.	.
scaffold760	subtractBed	intrn	826490	826723	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	826490	826723	282	+	.	.
scaffold760	subtractBed	intrn	826537	826683	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	826537	826683	92	+	.	.
scaffold760	subtractBed	intrn	827499	827529	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	827499	827529	62	+	.	.
scaffold760	subtractBed	intrn	829338	829380	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	829338	829380	86	+	.	.
scaffold760	subtractBed	intrn	830072	830119	.	-	.	Parent=CGI_10024018;
	scaffold760	TRF	Tandem_Repeat	830072	830119	96	+	.	.
scaffold760	subtractBed	intrn	873079	873294	.	+	.	Parent=CGI_10024019;
	scaffold760	TRF	Tandem_Repeat	873079	873294	405	+	.	.
scaffold760	subtractBed	intrn	885042	885097	.	-	.	Parent=CGI_10024020;
	scaffold760	TRF	Tandem_Repeat	885042	885097	112	+	.	.
scaffold764	subtractBed	intrn	24152	24203	.	-	.	Parent=CGI_10001622;
	scaffold764	TRF	Tandem_Repeat	24152	24203	65	+	.	.
scaffold764	subtractBed	intrn	24696	24807	.	-	.	Parent=CGI_10001622;
	scaffold764	TRF	Tandem_Repeat	24696	24807	224	+	.	.
scaffold766	subtractBed	intrn	2219	2339	.	+	.	Parent=CGI_10003454;
	scaffold766	TRF	Tandem_Repeat	2219	2339	138	+	.	.
scaffold766	subtractBed	intrn	3609	4145	.	+	.	Parent=CGI_10003454;
	scaffold766	TRF	Tandem_Repeat	3609	4145	194	+	.	.
scaffold766	subtractBed	intrn	10404	10464	.	+	.	Parent=CGI_10003454;
	scaffold766	TRF	Tandem_Repeat	10404	10464	108	+	.	.
scaffold766	subtractBed	intrn	32379	32485	.	+	.	Parent=CGI_10003455;
	scaffold766	TRF	Tandem_Repeat	32379	32485	115	+	.	.
scaffold767	subtractBed	intrn	34056	34118	.	-	.	Parent=CGI_10014837;
	scaffold767	TRF	Tandem_Repeat	34056	34118	126	+	.	.
scaffold767	subtractBed	intrn	41492	41516	.	-	.	Parent=CGI_10014837;
	scaffold767	TRF	Tandem_Repeat	41492	41516	50	+	.	.
scaffold767	subtractBed	intrn	53365	53396	.	+	.	Parent=CGI_10014838;
	scaffold767	TRF	Tandem_Repeat	53365	53396	64	+	.	.
scaffold767	subtractBed	intrn	53396	53437	.	+	.	Parent=CGI_10014838;
	scaffold767	TRF	Tandem_Repeat	53396	53437	84	+	.	.
scaffold767	subtractBed	intrn	65632	66483	.	-	.	Parent=CGI_10014839;
	scaffold767	TRF	Tandem_Repeat	65632	66483	903	+	.	.
scaffold767	subtractBed	intrn	66658	66710	.	-	.	Parent=CGI_10014839;
	scaffold767	TRF	Tandem_Repeat	66658	66710	61	+	.	.
scaffold767	subtractBed	intrn	66661	66718	.	-	.	Parent=CGI_10014839;
	scaffold767	TRF	Tandem_Repeat	66661	66718	89	+	.	.
scaffold767	subtractBed	intrn	280140	280430	.	+	.	Parent=CGI_10014846;
	scaffold767	WUBlastX	LINE_L1-Tx1	280140	280430	38	+	.	.
scaffold767	subtractBed	intrn	280686	281090	.	+	.	Parent=CGI_10014846;
	scaffold767	WUBlastX	LINE_L1	280686	281090	67	+	.	.
scaffold767	subtractBed	intrn	280671	280916	.	+	.	Parent=CGI_10014846;
	scaffold767	WUBlastX	LINE_L1-Tx1	280671	280916	85	+	.	.
scaffold767	subtractBed	intrn	280245	280430	.	+	.	Parent=CGI_10014846;
	scaffold767	WUBlastX	LINE_L1-Tx1	280245	280430	52	+	.	.
scaffold767	subtractBed	intrn	313103	313170	.	+	.	Parent=CGI_10014849;
	scaffold767	TRF	Tandem_Repeat	313103	313170	82	+	.	.
scaffold767	subtractBed	intrn	313129	313173	.	+	.	Parent=CGI_10014849;
	scaffold767	TRF	Tandem_Repeat	313129	313173	54	+	.	.
scaffold767	subtractBed	intrn	320503	320532	.	-	.	Parent=CGI_10014850;
	scaffold767	WUBlastX	LINE_CR1-L2	320503	320532	22	+	.	.
scaffold767	subtractBed	intrn	320854	321728	.	-	.	Parent=CGI_10014850;
	scaffold767	WUBlastX	LINE_RTE-X	320688	321728	47	+	.	.
scaffold767	subtractBed	intrn	320883	321731	.	-	.	Parent=CGI_10014850;
	scaffold767	WUBlastX	LINE_L2	320883	321731	623	+	.	.
scaffold767	subtractBed	intrn	326906	326973	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	326906	326973	113	+	.	.
scaffold767	subtractBed	intrn	328327	328475	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	328327	328475	90	+	.	.
scaffold767	subtractBed	intrn	350619	350706	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	350619	350706	68	+	.	.
scaffold767	subtractBed	intrn	351694	352437	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	351694	352437	898	+	.	.
scaffold767	subtractBed	intrn	351694	352520	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	351694	352520	775	+	.	.
scaffold767	subtractBed	intrn	374897	374934	.	-	.	Parent=CGI_10014850;
	scaffold767	TRF	Tandem_Repeat	374897	374934	58	+	.	.
scaffold767	subtractBed	intrn	382069	382899	.	+	.	Parent=CGI_10014851;
	scaffold767	TRF	Tandem_Repeat	382069	382899	428	+	.	.
scaffold767	subtractBed	intrn	382069	382786	.	+	.	Parent=CGI_10014851;
	scaffold767	TRF	Tandem_Repeat	382069	382786	731	+	.	.
scaffold767	subtractBed	intrn	382225	382899	.	+	.	Parent=CGI_10014851;
	scaffold767	TRF	Tandem_Repeat	382225	382899	529	+	.	.
scaffold767	subtractBed	intrn	395633	396208	.	-	.	Parent=CGI_10014852;
	scaffold767	TRF	Tandem_Repeat	395633	396208	114	+	.	.
scaffold767	subtractBed	intrn	395873	396421	.	-	.	Parent=CGI_10014852;
	scaffold767	TRF	Tandem_Repeat	395873	396421	332	+	.	.
scaffold767	subtractBed	intrn	398667	398709	.	-	.	Parent=CGI_10014852;
	scaffold767	TRF	Tandem_Repeat	398667	398709	86	+	.	.
scaffold77	subtractBed	intrn	1916	1941	.	+	.	Parent=CGI_10027963;
	scaffold77	TRF	Tandem_Repeat	1916	1941	52	+	.	.
scaffold77	subtractBed	intrn	30799	30842	.	+	.	Parent=CGI_10027964;
	scaffold77	TRF	Tandem_Repeat	30799	30842	72	+	.	.
scaffold77	subtractBed	intrn	32449	32582	.	+	.	Parent=CGI_10027964;
	scaffold77	TRF	Tandem_Repeat	32449	32582	72	+	.	.
scaffold77	subtractBed	intrn	32511	32633	.	+	.	Parent=CGI_10027964;
	scaffold77	TRF	Tandem_Repeat	32511	32633	79	+	.	.
scaffold77	subtractBed	intrn	83933	84288	.	+	.	Parent=CGI_10027965;
	scaffold77	TRF	Tandem_Repeat	83933	84288	397	+	.	.
scaffold77	subtractBed	intrn	85761	85962	.	+	.	Parent=CGI_10027965;
	scaffold77	TRF	Tandem_Repeat	85761	85962	181	+	.	.
scaffold77	subtractBed	intrn	85852	86221	.	+	.	Parent=CGI_10027965;
	scaffold77	TRF	Tandem_Repeat	85852	86221	210	+	.	.
scaffold77	subtractBed	intrn	96791	96928	.	-	.	Parent=CGI_10027966;
	scaffold77	WUBlastX	DNA_TcMar-Tigge	96791	96928	40	-	.	.
scaffold77	subtractBed	intrn	95306	96658	.	-	.	Parent=CGI_10027966;
	scaffold77	WUBlastX	DNA_TcMar-Pogo	95306	96658	741	-	.	.
scaffold77	subtractBed	intrn	155359	155414	.	+	.	Parent=CGI_10027969;
	scaffold77	TRF	Tandem_Repeat	155359	155414	112	+	.	.
scaffold77	subtractBed	intrn	168490	168567	.	+	.	Parent=CGI_10027970;
	scaffold77	WUBlastX	LINE_CR1	168490	168567	28	+	.	.
scaffold77	subtractBed	intrn	169180	171771	.	+	.	Parent=CGI_10027970;
	scaffold77	WUBlastX	LINE_L1-Tx1	169180	171771	934	+	.	.
scaffold77	subtractBed	intrn	174894	175007	.	+	.	Parent=CGI_10027970;
	scaffold77	TRF	Tandem_Repeat	174894	175007	174	+	.	.
scaffold77	subtractBed	intrn	219809	219885	.	+	.	Parent=CGI_10027973;
	scaffold77	TRF	Tandem_Repeat	219809	219885	73	+	.	.
scaffold77	subtractBed	intrn	219809	219885	.	+	.	Parent=CGI_10027973;
	scaffold77	TRF	Tandem_Repeat	219809	219885	82	+	.	.
scaffold77	subtractBed	intrn	327320	327351	.	+	.	Parent=CGI_10027977;
	scaffold77	TRF	Tandem_Repeat	327320	327351	64	+	.	.
scaffold77	subtractBed	intrn	656125	657138	.	+	.	Parent=CGI_10027987;
	scaffold77	WUBlastX	DNA_hAT-hATw	656125	657138	78	+	.	.
scaffold77	subtractBed	intrn	655939	657138	.	+	.	Parent=CGI_10027987;
	scaffold77	WUBlastX	DNA_hAT-hATw	655939	657138	25	+	.	.
scaffold77	subtractBed	intrn	658763	658846	.	+	.	Parent=CGI_10027987;
	scaffold77	WUBlastX	DNA_hAT-hATw	658763	658846	38	+	.	.
scaffold77	subtractBed	intrn	657104	658756	.	+	.	Parent=CGI_10027987;
	scaffold77	WUBlastX	DNA_hAT-hATw	657104	658756	651	+	.	.
scaffold77	subtractBed	intrn	664176	664526	.	-	.	Parent=CGI_10027988;
	scaffold77	WUBlastX	LINE_L1-Tx1	664176	664526	39	+	.	.
scaffold77	subtractBed	intrn	665488	665658	.	-	.	Parent=CGI_10027988;
	scaffold77	WUBlastX	LINE_L1-Tx1	665488	665658	73	+	.	.
scaffold77	subtractBed	intrn	665636	665965	.	-	.	Parent=CGI_10027988;
	scaffold77	WUBlastX	LINE_L1-Tx1	665636	665965	57	+	.	.
scaffold77	subtractBed	intrn	739089	739208	.	-	.	Parent=CGI_10027992;
	scaffold77	TRF	Tandem_Repeat	739089	739208	186	+	.	.
scaffold77	subtractBed	intrn	750352	750407	.	-	.	Parent=CGI_10027992;
	scaffold77	TRF	Tandem_Repeat	750352	750407	94	+	.	.
scaffold77	subtractBed	intrn	920718	920765	.	+	.	Parent=CGI_10028007;
	scaffold77	TRF	Tandem_Repeat	920718	920765	96	+	.	.
scaffold77	subtractBed	intrn	923942	923993	.	+	.	Parent=CGI_10028008;
	scaffold77	TRF	Tandem_Repeat	923942	923993	95	+	.	.
scaffold77	subtractBed	intrn	932416	932488	.	+	.	Parent=CGI_10028008;
	scaffold77	TRF	Tandem_Repeat	932416	932488	146	+	.	.
scaffold77	subtractBed	intrn	936668	937657	.	+	.	Parent=CGI_10028008;
	scaffold77	TRF	Tandem_Repeat	936668	937657	962	+	.	.
scaffold77	subtractBed	intrn	938011	938049	.	+	.	Parent=CGI_10028008;
	scaffold77	TRF	Tandem_Repeat	938011	938049	69	+	.	.
scaffold77	subtractBed	intrn	932416	932488	.	-	.	Parent=CGI_10028009;
	scaffold77	TRF	Tandem_Repeat	932416	932488	146	+	.	.
scaffold77	subtractBed	intrn	936668	937657	.	-	.	Parent=CGI_10028009;
	scaffold77	TRF	Tandem_Repeat	936668	937657	962	+	.	.
scaffold77	subtractBed	intrn	938011	938049	.	-	.	Parent=CGI_10028009;
	scaffold77	TRF	Tandem_Repeat	938011	938049	69	+	.	.
scaffold77	subtractBed	intrn	949391	949882	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	LINE_RTE-BovB	949391	949882	213	+	.	.
scaffold77	subtractBed	intrn	949466	949882	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	LINE_RTE-BovB	949466	949882	367	+	.	.
scaffold77	subtractBed	intrn	948472	948555	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	LINE_RTE-RTE	948472	948555	21	+	.	.
scaffold77	subtractBed	intrn	949301	949780	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	LINE_L1	949301	949780	62	+	.	.
scaffold77	subtractBed	intrn	950452	950529	.	-	.	Parent=CGI_10028012;
	scaffold77	TRF	Tandem_Repeat	950452	950529	147	+	.	.
scaffold77	subtractBed	intrn	949885	950397	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	LINE_RTE-BovB	949885	950397	357	+	.	.
scaffold77	subtractBed	intrn	954622	954700	.	-	.	Parent=CGI_10028012;
	scaffold77	TRF	Tandem_Repeat	954622	954700	149	+	.	.
scaffold77	subtractBed	intrn	959901	960446	.	-	.	Parent=CGI_10028012;
	scaffold77	WUBlastX	DNA_Zator	959901	960446	147	-	.	.
scaffold77	subtractBed	intrn	959901	960446	.	+	.	Parent=CGI_10028013;
	scaffold77	WUBlastX	DNA_Zator	959901	960446	147	-	.	.
scaffold77	subtractBed	intrn	960576	960713	.	+	.	Parent=CGI_10028013;
	scaffold77	WUBlastX	DNA_Zator	960576	960713	75	-	.	.
scaffold77	subtractBed	intrn	960825	961166	.	+	.	Parent=CGI_10028013;
	scaffold77	WUBlastX	DNA_Zator	960825	961166	20	-	.	.
scaffold77	subtractBed	intrn	999157	999419	.	+	.	Parent=CGI_10028015;
	scaffold77	TRF	Tandem_Repeat	999157	999419	400	+	.	.
scaffold77	subtractBed	intrn	1014400	1014720	.	+	.	Parent=CGI_10028016;
	scaffold77	TRF	Tandem_Repeat	1014400	1014720	471	+	.	.
scaffold77	subtractBed	intrn	1022334	1022391	.	+	.	Parent=CGI_10028016;
	scaffold77	TRF	Tandem_Repeat	1022334	1022391	116	+	.	.
scaffold77	subtractBed	intrn	1030591	1032422	.	-	.	Parent=CGI_10028017;
	scaffold77	WUBlastX	LINE_RTE-X	1030591	1033860	926	-	.	.
scaffold77	subtractBed	intrn	1055775	1056540	.	+	.	Parent=CGI_10028018;
	scaffold77	TRF	Tandem_Repeat	1055775	1056540	685	+	.	.
scaffold77	subtractBed	intrn	1055822	1056540	.	+	.	Parent=CGI_10028018;
	scaffold77	TRF	Tandem_Repeat	1055822	1056540	640	+	.	.
scaffold77	subtractBed	intrn	1055918	1056526	.	+	.	Parent=CGI_10028018;
	scaffold77	TRF	Tandem_Repeat	1055918	1056526	280	+	.	.
scaffold77	subtractBed	intrn	1055798	1056509	.	+	.	Parent=CGI_10028018;
	scaffold77	TRF	Tandem_Repeat	1055798	1056509	778	+	.	.
scaffold77	subtractBed	intrn	1060936	1061158	.	+	.	Parent=CGI_10028018;
	scaffold77	TRF	Tandem_Repeat	1060936	1061158	272	+	.	.
scaffold77	subtractBed	intrn	1072217	1072262	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1072217	1072262	85	+	.	.
scaffold77	subtractBed	intrn	1075524	1075580	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1075524	1075580	114	+	.	.
scaffold77	subtractBed	intrn	1079997	1080041	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1079997	1080041	90	+	.	.
scaffold77	subtractBed	intrn	1092529	1092581	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1092529	1092581	88	+	.	.
scaffold77	subtractBed	intrn	1092529	1092584	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1092529	1092584	58	+	.	.
scaffold77	subtractBed	intrn	1092535	1092584	.	+	.	Parent=CGI_10028019;
	scaffold77	TRF	Tandem_Repeat	1092535	1092584	73	+	.	.
scaffold77	subtractBed	intrn	1096521	1096703	.	+	.	Parent=CGI_10028019;
	scaffold77	WUBlastX	DNA_Zator	1096521	1096703	52	-	.	.
scaffold77	subtractBed	intrn	1112196	1112375	.	+	.	Parent=CGI_10028021;
	scaffold77	TRF	Tandem_Repeat	1112196	1112375	238	+	.	.
scaffold77	subtractBed	intrn	1112196	1112484	.	+	.	Parent=CGI_10028021;
	scaffold77	TRF	Tandem_Repeat	1112196	1112484	258	+	.	.
scaffold77	subtractBed	intrn	1112392	1112483	.	+	.	Parent=CGI_10028021;
	scaffold77	TRF	Tandem_Repeat	1112392	1112483	98	+	.	.
scaffold77	subtractBed	intrn	1120237	1120551	.	+	.	Parent=CGI_10028021;
	scaffold77	WUBlastX	LINE_L1-Tx1	1120237	1120551	56	-	.	.
scaffold77	subtractBed	intrn	1120297	1120536	.	+	.	Parent=CGI_10028021;
	scaffold77	WUBlastX	LINE_L1-Tx1	1120297	1120536	57	-	.	.
scaffold77	subtractBed	intrn	1120544	1120975	.	+	.	Parent=CGI_10028021;
	scaffold77	WUBlastX	LINE_L1-Tx1	1120544	1120975	90	-	.	.
scaffold77	subtractBed	intrn	1189326	1190206	.	-	.	Parent=CGI_10028026;
	scaffold77	TRF	Tandem_Repeat	1189326	1190206	1146	+	.	.
scaffold77	subtractBed	intrn	1227828	1227868	.	+	.	Parent=CGI_10028027;
	scaffold77	TRF	Tandem_Repeat	1227828	1227868	82	+	.	.
scaffold77	subtractBed	intrn	1232244	1232835	.	+	.	Parent=CGI_10028027;
	scaffold77	TRF	Tandem_Repeat	1232244	1232835	659	+	.	.
scaffold77	subtractBed	intrn	1232244	1232837	.	+	.	Parent=CGI_10028027;
	scaffold77	TRF	Tandem_Repeat	1232244	1232837	668	+	.	.
scaffold77	subtractBed	intrn	1277799	1277939	.	+	.	Parent=CGI_10028030;
	scaffold77	TRF	Tandem_Repeat	1277799	1277939	239	+	.	.
scaffold77	subtractBed	intrn	1283374	1283986	.	+	.	Parent=CGI_10028030;
	scaffold77	TRF	Tandem_Repeat	1283374	1283986	838	+	.	.
scaffold77	subtractBed	intrn	1299284	1299387	.	-	.	Parent=CGI_10028031;
	scaffold77	TRF	Tandem_Repeat	1299284	1299387	84	+	.	.
scaffold77	subtractBed	intrn	1300328	1300849	.	-	.	Parent=CGI_10028031;
	scaffold77	WUBlastX	LINE_CR1	1300328	1300849	34	+	.	.
scaffold77	subtractBed	intrn	1332369	1332408	.	+	.	Parent=CGI_10028034;
	scaffold77	TRF	Tandem_Repeat	1332369	1332408	80	+	.	.
scaffold77	subtractBed	intrn	1334944	1334987	.	+	.	Parent=CGI_10028034;
	scaffold77	TRF	Tandem_Repeat	1334944	1334987	88	+	.	.
scaffold77	subtractBed	intrn	1340721	1340748	.	+	.	Parent=CGI_10028034;
	scaffold77	TRF	Tandem_Repeat	1340721	1340748	56	+	.	.
scaffold77	subtractBed	intrn	1344043	1345186	.	+	.	Parent=CGI_10028034;
	scaffold77	TRF	Tandem_Repeat	1344043	1345186	1696	+	.	.
scaffold77	subtractBed	intrn	1343379	1343632	.	+	.	Parent=CGI_10028034;
	scaffold77	TRF	Tandem_Repeat	1343379	1343632	140	+	.	.
scaffold77	subtractBed	intrn	1332369	1332408	.	-	.	Parent=CGI_10028035;
	scaffold77	TRF	Tandem_Repeat	1332369	1332408	80	+	.	.
scaffold77	subtractBed	intrn	1334944	1334987	.	-	.	Parent=CGI_10028035;
	scaffold77	TRF	Tandem_Repeat	1334944	1334987	88	+	.	.
scaffold77	subtractBed	intrn	1453962	1455050	.	+	.	Parent=CGI_10028040;
	scaffold77	WUBlastX	LTR_Gypsy	1453962	1455050	164	-	.	.
scaffold77	subtractBed	intrn	1453959	1454867	.	+	.	Parent=CGI_10028040;
	scaffold77	WUBlastX	LTR_Gypsy	1453959	1454867	232	-	.	.
scaffold77	subtractBed	intrn	1454484	1455152	.	+	.	Parent=CGI_10028040;
	scaffold77	WUBlastX	LTR_Gypsy	1454484	1455152	128	-	.	.
scaffold77	subtractBed	intrn	1453953	1454636	.	+	.	Parent=CGI_10028040;
	scaffold77	WUBlastX	LTR_Gypsy	1453953	1454636	272	-	.	.
scaffold77	subtractBed	intrn	1545668	1546586	.	+	.	Parent=CGI_10028044;
	scaffold77	TRF	Tandem_Repeat	1545668	1546586	557	+	.	.
scaffold77	subtractBed	intrn	1545675	1546586	.	+	.	Parent=CGI_10028044;
	scaffold77	TRF	Tandem_Repeat	1545675	1546586	845	+	.	.
scaffold77	subtractBed	intrn	1552582	1553537	.	-	.	Parent=CGI_10028046;
	scaffold77	TRF	Tandem_Repeat	1552582	1553537	1415	+	.	.
scaffold77	subtractBed	intrn	1562322	1562792	.	-	.	Parent=CGI_10028046;
	scaffold77	TRF	Tandem_Repeat	1562322	1562792	574	+	.	.
scaffold77	subtractBed	intrn	1580111	1580475	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1580111	1580475	541	+	.	.
scaffold77	subtractBed	intrn	1580111	1580522	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1580111	1580522	545	+	.	.
scaffold77	subtractBed	intrn	1580143	1580218	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1580143	1580218	69	+	.	.
scaffold77	subtractBed	intrn	1580143	1580262	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1580143	1580262	66	+	.	.
scaffold77	subtractBed	intrn	1580111	1580522	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1580111	1580522	545	+	.	.
scaffold77	subtractBed	intrn	1582612	1583199	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1582598	1583199	970	+	.	.
scaffold77	subtractBed	intrn	1583405	1583880	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1583405	1583880	781	+	.	.
scaffold77	subtractBed	intrn	1585503	1585551	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1585503	1585551	64	+	.	.
scaffold77	subtractBed	intrn	1585503	1585545	.	-	.	Parent=CGI_10028048;
	scaffold77	TRF	Tandem_Repeat	1585503	1585545	68	+	.	.
scaffold77	subtractBed	intrn	1596953	1597213	.	-	.	Parent=CGI_10028048;
	scaffold77	WUBlastX	LINE_RTE-BovB	1596953	1597213	162	+	.	.
scaffold770	subtractBed	intrn	64964	65104	.	-	.	Parent=CGI_10006265;
	scaffold770	WUBlastX	DNA_Kolobok	64964	65104	33	+	.	.
scaffold770	subtractBed	intrn	65292	65447	.	-	.	Parent=CGI_10006265;
	scaffold770	WUBlastX	DNA_Kolobok	65292	65447	44	+	.	.
scaffold770	subtractBed	intrn	65570	65725	.	-	.	Parent=CGI_10006265;
	scaffold770	WUBlastX	DNA_Kolobok	65570	65725	38	+	.	.
scaffold771	subtractBed	intrn	17345	17863	.	+	.	Parent=CGI_10013628;
	scaffold771	TRF	Tandem_Repeat	16984	17863	733	+	.	.
scaffold771	subtractBed	intrn	17345	17902	.	+	.	Parent=CGI_10013628;
	scaffold771	TRF	Tandem_Repeat	16984	17902	822	+	.	.
scaffold771	subtractBed	intrn	24110	25602	.	+	.	Parent=CGI_10013628;
	scaffold771	TRF	Tandem_Repeat	24110	25602	1735	+	.	.
scaffold771	subtractBed	intrn	24110	25602	.	+	.	Parent=CGI_10013628;
	scaffold771	TRF	Tandem_Repeat	24110	25602	2095	+	.	.
scaffold771	subtractBed	intrn	24110	25602	.	+	.	Parent=CGI_10013628;
	scaffold771	TRF	Tandem_Repeat	24110	25602	2093	+	.	.
scaffold771	subtractBed	intrn	28925	29644	.	-	.	Parent=CGI_10013630;
	scaffold771	TRF	Tandem_Repeat	28911	29644	806	+	.	.
scaffold771	subtractBed	intrn	28925	29561	.	-	.	Parent=CGI_10013630;
	scaffold771	TRF	Tandem_Repeat	28911	29561	795	+	.	.
scaffold771	subtractBed	intrn	28925	29561	.	-	.	Parent=CGI_10013630;
	scaffold771	TRF	Tandem_Repeat	28911	29561	770	+	.	.
scaffold771	subtractBed	intrn	28927	29552	.	-	.	Parent=CGI_10013630;
	scaffold771	TRF	Tandem_Repeat	28927	29552	563	+	.	.
scaffold771	subtractBed	intrn	34324	34374	.	-	.	Parent=CGI_10013630;
	scaffold771	TRF	Tandem_Repeat	34324	34374	102	+	.	.
scaffold771	subtractBed	intrn	38781	39058	.	-	.	Parent=CGI_10013631;
	scaffold771	TRF	Tandem_Repeat	38781	39058	412	+	.	.
scaffold771	subtractBed	intrn	65422	65919	.	+	.	Parent=CGI_10013633;
	scaffold771	TRF	Tandem_Repeat	65422	65919	442	+	.	.
scaffold771	subtractBed	intrn	70804	71060	.	+	.	Parent=CGI_10013633;
	scaffold771	TRF	Tandem_Repeat	70804	71060	363	+	.	.
scaffold771	subtractBed	intrn	79352	79481	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	79352	79481	242	+	.	.
scaffold771	subtractBed	intrn	87832	88298	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	87832	88298	581	+	.	.
scaffold771	subtractBed	intrn	92556	92712	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	92556	92712	100	+	.	.
scaffold771	subtractBed	intrn	92460	92778	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	92460	92790	372	+	.	.
scaffold771	subtractBed	intrn	92547	92754	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	92547	92754	116	+	.	.
scaffold771	subtractBed	intrn	103928	104416	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	103928	104416	831	+	.	.
scaffold771	subtractBed	intrn	106355	106577	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	106355	106577	259	+	.	.
scaffold771	subtractBed	intrn	106347	106572	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	106347	106572	292	+	.	.
scaffold771	subtractBed	intrn	106759	107374	.	-	.	Parent=CGI_10013635;
	scaffold771	TRF	Tandem_Repeat	106759	107374	928	+	.	.
scaffold771	subtractBed	intrn	145459	145498	.	-	.	Parent=CGI_10013639;
	scaffold771	TRF	Tandem_Repeat	145459	145498	53	+	.	.
scaffold771	subtractBed	intrn	145462	145498	.	-	.	Parent=CGI_10013639;
	scaffold771	TRF	Tandem_Repeat	145462	145498	65	+	.	.
scaffold771	subtractBed	intrn	152347	153595	.	-	.	Parent=CGI_10013639;
	scaffold771	TRF	Tandem_Repeat	152347	153595	1243	+	.	.
scaffold771	subtractBed	intrn	152347	153595	.	-	.	Parent=CGI_10013639;
	scaffold771	TRF	Tandem_Repeat	152347	153595	1387	+	.	.
scaffold771	subtractBed	intrn	174235	174278	.	+	.	Parent=CGI_10013640;
	scaffold771	TRF	Tandem_Repeat	174235	174278	79	+	.	.
scaffold771	subtractBed	intrn	270694	270931	.	-	.	Parent=CGI_10013642;
	scaffold771	TRF	Tandem_Repeat	270694	270931	199	+	.	.
scaffold771	subtractBed	intrn	281609	282873	.	+	.	Parent=CGI_10013643;
	scaffold771	TRF	Tandem_Repeat	281609	282873	1827	+	.	.
scaffold771	subtractBed	intrn	285748	285886	.	+	.	Parent=CGI_10013643;
	scaffold771	TRF	Tandem_Repeat	285748	285886	260	+	.	.
scaffold771	subtractBed	intrn	299675	299707	.	-	.	Parent=CGI_10013645;
	scaffold771	TRF	Tandem_Repeat	299675	299707	66	+	.	.
scaffold771	subtractBed	intrn	300679	300712	.	-	.	Parent=CGI_10013645;
	scaffold771	TRF	Tandem_Repeat	300679	300712	68	+	.	.
scaffold771	subtractBed	intrn	300844	301176	.	-	.	Parent=CGI_10013645;
	scaffold771	TRF	Tandem_Repeat	300844	301176	537	+	.	.
scaffold772	subtractBed	intrn	23322	23365	.	-	.	Parent=CGI_10016573;
	scaffold772	TRF	Tandem_Repeat	23322	23365	63	+	.	.
scaffold772	subtractBed	intrn	37718	37755	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	37718	37755	76	+	.	.
scaffold772	subtractBed	intrn	40120	40165	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	40120	40165	92	+	.	.
scaffold772	subtractBed	intrn	41295	41333	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	41295	41333	51	+	.	.
scaffold772	subtractBed	intrn	49950	50005	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	49950	50005	112	+	.	.
scaffold772	subtractBed	intrn	51801	51859	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	51801	51859	109	+	.	.
scaffold772	subtractBed	intrn	51985	52065	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	51985	52065	117	+	.	.
scaffold772	subtractBed	intrn	52980	53025	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	52980	53025	83	+	.	.
scaffold772	subtractBed	intrn	53544	53774	.	-	.	Parent=CGI_10016575;
	scaffold772	WUBlastX	LINE_Penelope	53544	53774	52	-	.	.
scaffold772	subtractBed	intrn	53469	53717	.	-	.	Parent=CGI_10016575;
	scaffold772	WUBlastX	LINE_Penelope	53469	53717	38	-	.	.
scaffold772	subtractBed	intrn	53783	53950	.	-	.	Parent=CGI_10016575;
	scaffold772	WUBlastX	LINE_Penelope	53783	53950	38	-	.	.
scaffold772	subtractBed	intrn	53786	53998	.	-	.	Parent=CGI_10016575;
	scaffold772	WUBlastX	LINE_Penelope	53786	53998	27	-	.	.
scaffold772	subtractBed	intrn	57921	58634	.	-	.	Parent=CGI_10016575;
	scaffold772	WUBlastX	LINE_RTE-X	57921	58634	192	+	.	.
scaffold772	subtractBed	intrn	65707	65756	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	65707	65756	75	+	.	.
scaffold772	subtractBed	intrn	66137	66200	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	66137	66200	110	+	.	.
scaffold772	subtractBed	intrn	64562	65565	.	-	.	Parent=CGI_10016575;
	scaffold772	TRF	Tandem_Repeat	64562	65565	1737	+	.	.
scaffold772	subtractBed	intrn	72794	72849	.	-	.	Parent=CGI_10016576;
	scaffold772	TRF	Tandem_Repeat	72794	72849	112	+	.	.
scaffold772	subtractBed	intrn	79453	79616	.	-	.	Parent=CGI_10016577;
	scaffold772	TRF	Tandem_Repeat	79453	79616	188	+	.	.
scaffold772	subtractBed	intrn	79453	79642	.	-	.	Parent=CGI_10016577;
	scaffold772	TRF	Tandem_Repeat	79453	79642	123	+	.	.
scaffold772	subtractBed	intrn	92531	92601	.	-	.	Parent=CGI_10016579;
	scaffold772	TRF	Tandem_Repeat	92531	92601	79	+	.	.
scaffold772	subtractBed	intrn	147440	147641	.	-	.	Parent=CGI_10016580;
	scaffold772	TRF	Tandem_Repeat	147440	147641	354	+	.	.
scaffold772	subtractBed	intrn	154898	155498	.	+	.	Parent=CGI_10016581;
	scaffold772	TRF	Tandem_Repeat	154898	155498	612	+	.	.
scaffold772	subtractBed	intrn	169358	169525	.	+	.	Parent=CGI_10016583;
	scaffold772	TRF	Tandem_Repeat	169358	169525	291	+	.	.
scaffold772	subtractBed	intrn	174587	174778	.	+	.	Parent=CGI_10016584;
	scaffold772	WUBlastX	DNA_TcMar-Tc1	174587	174778	90	-	.	.
scaffold772	subtractBed	intrn	174755	175465	.	+	.	Parent=CGI_10016584;
	scaffold772	WUBlastX	DNA_TcMar-Tc1	174755	175465	201	-	.	.
scaffold772	subtractBed	intrn	174656	175300	.	+	.	Parent=CGI_10016584;
	scaffold772	WUBlastX	DNA_TcMar-Tc1	174656	175300	181	-	.	.
scaffold772	subtractBed	intrn	174764	175300	.	+	.	Parent=CGI_10016584;
	scaffold772	WUBlastX	DNA_TcMar-Tc1	174764	175300	222	-	.	.
scaffold772	subtractBed	intrn	177425	177549	.	+	.	Parent=CGI_10016584;
	scaffold772	TRF	Tandem_Repeat	177425	177549	241	+	.	.
scaffold772	subtractBed	intrn	177718	177825	.	+	.	Parent=CGI_10016584;
	scaffold772	WUBlastX	LINE_RTE-BovB	177718	177825	47	-	.	.
scaffold772	subtractBed	intrn	242463	242822	.	-	.	Parent=CGI_10016587;
	scaffold772	WUBlastX	DNA_hAT-Blackja	242463	242822	77	+	.	.
scaffold772	subtractBed	intrn	243667	243828	.	-	.	Parent=CGI_10016587;
	scaffold772	WUBlastX	DNA_hAT-hAT5	243667	243828	54	+	.	.
scaffold772	subtractBed	intrn	242445	242873	.	-	.	Parent=CGI_10016587;
	scaffold772	WUBlastX	DNA_hAT-Charlie	242445	242873	63	+	.	.
scaffold772	subtractBed	intrn	242430	242954	.	-	.	Parent=CGI_10016587;
	scaffold772	WUBlastX	DNA_hAT-Blackja	242430	242954	58	+	.	.
scaffold772	subtractBed	intrn	253137	253168	.	-	.	Parent=CGI_10016587;
	scaffold772	TRF	Tandem_Repeat	253137	253168	64	+	.	.
scaffold772	subtractBed	intrn	254089	254130	.	-	.	Parent=CGI_10016587;
	scaffold772	TRF	Tandem_Repeat	254089	254130	84	+	.	.
scaffold772	subtractBed	intrn	256286	256386	.	-	.	Parent=CGI_10016587;
	scaffold772	TRF	Tandem_Repeat	256286	256386	202	+	.	.
scaffold772	subtractBed	intrn	257804	257845	.	-	.	Parent=CGI_10016587;
	scaffold772	TRF	Tandem_Repeat	257804	257845	84	+	.	.
scaffold772	subtractBed	intrn	259830	259883	.	-	.	Parent=CGI_10016587;
	scaffold772	TRF	Tandem_Repeat	259830	259883	74	+	.	.
scaffold772	subtractBed	intrn	272367	273160	.	+	.	Parent=CGI_10016589;
	scaffold772	TRF	Tandem_Repeat	272367	273160	1157	+	.	.
scaffold772	subtractBed	intrn	285389	285672	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	285389	285679	30	+	.	.
scaffold772	subtractBed	intrn	283905	284060	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	283905	284060	50	+	.	.
scaffold772	subtractBed	intrn	282061	282405	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	282061	282405	108	+	.	.
scaffold772	subtractBed	intrn	282127	282486	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	282127	282486	47	+	.	.
scaffold772	subtractBed	intrn	282598	282726	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	282598	282726	73	+	.	.
scaffold772	subtractBed	intrn	285039	285143	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	285039	285143	36	+	.	.
scaffold772	subtractBed	intrn	285176	285244	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	285176	285244	20	+	.	.
scaffold772	subtractBed	intrn	285485	285672	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	285485	285949	154	+	.	.
scaffold772	subtractBed	intrn	281926	282408	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	281926	282408	93	+	.	.
scaffold772	subtractBed	intrn	283352	283471	.	+	.	Parent=CGI_10016590;
	scaffold772	WUBlastX	DNA_PiggyBac	283352	283471	69	+	.	.
scaffold772	subtractBed	intrn	317130	317393	.	+	.	Parent=CGI_10016592;
	scaffold772	TRF	Tandem_Repeat	317130	317393	413	+	.	.
scaffold772	subtractBed	intrn	338912	339397	.	+	.	Parent=CGI_10016594;
	scaffold772	WUBlastX	LINE_RTE-X	338912	339397	117	+	.	.
scaffold772	subtractBed	intrn	339386	339712	.	+	.	Parent=CGI_10016594;
	scaffold772	WUBlastX	LTR_Ngaro	339386	339712	193	+	.	.
scaffold772	subtractBed	intrn	339718	340446	.	+	.	Parent=CGI_10016594;
	scaffold772	WUBlastX	LTR_Ngaro	339718	340446	279	+	.	.
scaffold772	subtractBed	intrn	340543	341367	.	+	.	Parent=CGI_10016594;
	scaffold772	WUBlastX	LTR_Ngaro	340543	341367	305	+	.	.
scaffold773	subtractBed	intrn	4994	5107	.	-	.	Parent=CGI_10011340;
	scaffold773	TRF	Tandem_Repeat	4994	5107	174	+	.	.
scaffold773	subtractBed	intrn	4994	5107	.	-	.	Parent=CGI_10011340;
	scaffold773	TRF	Tandem_Repeat	4994	5107	174	+	.	.
scaffold773	subtractBed	intrn	4994	5107	.	-	.	Parent=CGI_10011340;
	scaffold773	TRF	Tandem_Repeat	4994	5107	174	+	.	.
scaffold773	subtractBed	intrn	9911	9944	.	-	.	Parent=CGI_10011341;
	scaffold773	TRF	Tandem_Repeat	9911	9944	50	+	.	.
scaffold773	subtractBed	intrn	10393	10809	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	LTR_Gypsy-Cigr	10393	10809	53	-	.	.
scaffold773	subtractBed	intrn	10823	11098	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	LTR_Gypsy-Cigr	10823	11098	92	-	.	.
scaffold773	subtractBed	intrn	10369	10575	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	LTR_Copia	10369	10575	55	-	.	.
scaffold773	subtractBed	intrn	10324	10494	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	LTR_Gypsy	10324	10494	23	-	.	.
scaffold773	subtractBed	intrn	11752	11799	.	-	.	Parent=CGI_10011341;
	scaffold773	TRF	Tandem_Repeat	11752	11799	96	+	.	.
scaffold773	subtractBed	intrn	15163	15624	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	DNA_Crypton	15163	15624	161	-	.	.
scaffold773	subtractBed	intrn	15685	15855	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	DNA_Crypton	15685	15855	64	-	.	.
scaffold773	subtractBed	intrn	16216	16575	.	-	.	Parent=CGI_10011341;
	scaffold773	WUBlastX	DNA_Crypton	16216	16575	110	-	.	.
scaffold773	subtractBed	intrn	111868	112017	.	-	.	Parent=CGI_10011343;
	scaffold773	TRF	Tandem_Repeat	111868	112017	255	+	.	.
scaffold773	subtractBed	intrn	142896	142940	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	142896	142940	90	+	.	.
scaffold773	subtractBed	intrn	143624	143689	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	143624	143689	114	+	.	.
scaffold773	subtractBed	intrn	143780	143825	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	143780	143825	92	+	.	.
scaffold773	subtractBed	intrn	144127	144156	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	144127	144156	60	+	.	.
scaffold773	subtractBed	intrn	144463	144523	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	144463	144523	61	+	.	.
scaffold773	subtractBed	intrn	147209	147254	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	147209	147254	92	+	.	.
scaffold773	subtractBed	intrn	147254	147306	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	147254	147306	88	+	.	.
scaffold773	subtractBed	intrn	148975	149004	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	148975	149004	60	+	.	.
scaffold773	subtractBed	intrn	149004	149034	.	-	.	Parent=CGI_10011344;
	scaffold773	TRF	Tandem_Repeat	149004	149034	53	+	.	.
scaffold773	subtractBed	intrn	151324	151680	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	151324	151680	113	+	.	.
scaffold773	subtractBed	intrn	150710	150892	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	150710	150892	40	+	.	.
scaffold773	subtractBed	intrn	150756	150938	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	150756	150938	30	+	.	.
scaffold773	subtractBed	intrn	150882	150950	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	150882	150950	25	+	.	.
scaffold773	subtractBed	intrn	150964	151032	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	150964	151032	29	+	.	.
scaffold773	subtractBed	intrn	151156	151680	.	-	.	Parent=CGI_10011344;
	scaffold773	WUBlastX	LINE_L2	151156	151680	64	+	.	.
scaffold773	subtractBed	intrn	194504	194590	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT-Tip100	194504	194590	25	+	.	.
scaffold773	subtractBed	intrn	193015	193380	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT-Tip100	193015	193380	36	+	.	.
scaffold773	subtractBed	intrn	193778	194170	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT	193778	194170	62	+	.	.
scaffold773	subtractBed	intrn	193347	193778	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT	193347	193778	99	+	.	.
scaffold773	subtractBed	intrn	193874	194173	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT	193874	194173	109	+	.	.
scaffold773	subtractBed	intrn	195376	195488	.	+	.	Parent=CGI_10011345;
	scaffold773	WUBlastX	DNA_hAT-Tip100	195324	195488	25	+	.	.
scaffold773	subtractBed	intrn	236568	236594	.	-	.	Parent=CGI_10011348;
	scaffold773	TRF	Tandem_Repeat	236568	236594	54	+	.	.
scaffold773	subtractBed	intrn	244932	244968	.	-	.	Parent=CGI_10011348;
	scaffold773	TRF	Tandem_Repeat	244932	244968	56	+	.	.
scaffold773	subtractBed	intrn	239161	240051	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	239161	240051	424	-	.	.
scaffold773	subtractBed	intrn	240711	240761	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	240711	240761	33	-	.	.
scaffold773	subtractBed	intrn	240764	240871	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	240764	240871	32	-	.	.
scaffold773	subtractBed	intrn	240088	240432	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	240088	240432	123	-	.	.
scaffold773	subtractBed	intrn	243319	243492	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Harbinger	243319	243492	84	+	.	.
scaffold773	subtractBed	intrn	239008	239511	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	239008	239511	207	-	.	.
scaffold773	subtractBed	intrn	239998	240576	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	239998	240576	28	-	.	.
scaffold773	subtractBed	intrn	235331	235966	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Maverick	235331	235966	410	-	.	.
scaffold773	subtractBed	intrn	259016	259177	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	DNA_Harbinger	259016	259177	44	-	.	.
scaffold773	subtractBed	intrn	267321	267572	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Gypsy	267321	267572	46	+	.	.
scaffold773	subtractBed	intrn	266819	266980	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Gypsy	266819	266980	56	+	.	.
scaffold773	subtractBed	intrn	267198	267527	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Gypsy	267198	267527	27	+	.	.
scaffold773	subtractBed	intrn	266699	267247	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Gypsy	266699	267247	28	+	.	.
scaffold773	subtractBed	intrn	267303	267530	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Gypsy	267303	267530	62	+	.	.
scaffold773	subtractBed	intrn	266714	267043	.	-	.	Parent=CGI_10011348;
	scaffold773	WUBlastX	LTR_Copia	266714	267043	43	+	.	.
scaffold775	subtractBed	intrn	71405	71449	.	+	.	Parent=CGI_10006088;
	scaffold775	TRF	Tandem_Repeat	71405	71449	72	+	.	.
scaffold775	subtractBed	intrn	71409	71458	.	+	.	Parent=CGI_10006088;
	scaffold775	TRF	Tandem_Repeat	71409	71458	52	+	.	.
scaffold775	subtractBed	intrn	81535	82069	.	-	.	Parent=CGI_10006089;
	scaffold775	TRF	Tandem_Repeat	81535	82087	687	+	.	.
scaffold775	subtractBed	intrn	81535	82069	.	-	.	Parent=CGI_10006089;
	scaffold775	TRF	Tandem_Repeat	81535	82087	765	+	.	.
scaffold775	subtractBed	intrn	81535	82069	.	-	.	Parent=CGI_10006089;
	scaffold775	TRF	Tandem_Repeat	81535	82087	826	+	.	.
scaffold775	subtractBed	intrn	128605	129036	.	+	.	Parent=CGI_10006094;
	scaffold775	WUBlastX	DNA_Merlin	128605	129036	140	+	.	.
scaffold775	subtractBed	intrn	128080	128264	.	+	.	Parent=CGI_10006094;
	scaffold775	WUBlastX	DNA_Merlin	127917	128264	47	+	.	.
scaffold776	subtractBed	intrn	1291	1327	.	+	.	Parent=CGI_10002828;
	scaffold776	TRF	Tandem_Repeat	1291	1327	74	+	.	.
scaffold78	subtractBed	intrn	37269	37350	.	+	.	Parent=CGI_10006914;
	scaffold78	TRF	Tandem_Repeat	37269	37350	164	+	.	.
scaffold78	subtractBed	intrn	41628	41734	.	+	.	Parent=CGI_10006914;
	scaffold78	TRF	Tandem_Repeat	41628	41734	124	+	.	.
scaffold78	subtractBed	intrn	38878	38982	.	+	.	Parent=CGI_10006914;
	scaffold78	WUBlastX	LTR_Gypsy	38878	38982	28	+	.	.
scaffold78	subtractBed	intrn	38648	38926	.	+	.	Parent=CGI_10006914;
	scaffold78	WUBlastX	LTR_Gypsy	38648	38926	69	+	.	.
scaffold78	subtractBed	intrn	38648	38788	.	+	.	Parent=CGI_10006914;
	scaffold78	WUBlastX	LTR_Gypsy	38648	38788	115	+	.	.
scaffold78	subtractBed	intrn	38648	38881	.	+	.	Parent=CGI_10006914;
	scaffold78	WUBlastX	LTR_Gypsy-Cigr	38648	38881	111	+	.	.
scaffold78	subtractBed	intrn	38495	38755	.	+	.	Parent=CGI_10006914;
	scaffold78	WUBlastX	LTR_Gypsy	38495	38755	84	+	.	.
scaffold78	subtractBed	intrn	128337	128474	.	-	.	Parent=CGI_10006916;
	scaffold78	WUBlastX	LINE_RTE-X	128337	128474	29	+	.	.
scaffold780	subtractBed	intrn	21280	21328	.	+	.	Parent=CGI_10024708;
	scaffold780	TRF	Tandem_Repeat	21280	21328	98	+	.	.
scaffold780	subtractBed	intrn	38396	38450	.	-	.	Parent=CGI_10024709;
	scaffold780	TRF	Tandem_Repeat	38396	38450	110	+	.	.
scaffold780	subtractBed	intrn	39228	39257	.	-	.	Parent=CGI_10024709;
	scaffold780	TRF	Tandem_Repeat	39228	39257	53	+	.	.
scaffold780	subtractBed	intrn	58909	59010	.	-	.	Parent=CGI_10024711;
	scaffold780	TRF	Tandem_Repeat	58909	59010	73	+	.	.
scaffold780	subtractBed	intrn	59099	59464	.	-	.	Parent=CGI_10024711;
	scaffold780	TRF	Tandem_Repeat	59099	59464	533	+	.	.
scaffold780	subtractBed	intrn	62139	62189	.	-	.	Parent=CGI_10024711;
	scaffold780	TRF	Tandem_Repeat	62139	62189	61	+	.	.
scaffold780	subtractBed	intrn	62121	62189	.	-	.	Parent=CGI_10024711;
	scaffold780	TRF	Tandem_Repeat	62121	62189	66	+	.	.
scaffold780	subtractBed	intrn	62121	62189	.	-	.	Parent=CGI_10024711;
	scaffold780	TRF	Tandem_Repeat	62121	62189	75	+	.	.
scaffold780	subtractBed	intrn	91377	91850	.	+	.	Parent=CGI_10024713;
	scaffold780	TRF	Tandem_Repeat	91377	91850	338	+	.	.
scaffold780	subtractBed	intrn	91377	91822	.	+	.	Parent=CGI_10024713;
	scaffold780	TRF	Tandem_Repeat	91377	91822	370	+	.	.
scaffold780	subtractBed	intrn	95075	95303	.	+	.	Parent=CGI_10024713;
	scaffold780	TRF	Tandem_Repeat	95075	95303	189	+	.	.
scaffold780	subtractBed	intrn	95138	95237	.	+	.	Parent=CGI_10024713;
	scaffold780	TRF	Tandem_Repeat	95138	95237	128	+	.	.
scaffold780	subtractBed	intrn	95075	95303	.	-	.	Parent=CGI_10024714;
	scaffold780	TRF	Tandem_Repeat	95075	95303	189	+	.	.
scaffold780	subtractBed	intrn	95138	95237	.	-	.	Parent=CGI_10024714;
	scaffold780	TRF	Tandem_Repeat	95138	95237	128	+	.	.
scaffold780	subtractBed	intrn	144623	144649	.	+	.	Parent=CGI_10024719;
	scaffold780	TRF	Tandem_Repeat	144623	144649	54	+	.	.
scaffold780	subtractBed	intrn	150167	150931	.	+	.	Parent=CGI_10024719;
	scaffold780	WUBlastX	LINE_L2	150167	150931	111	-	.	.
scaffold780	subtractBed	intrn	150164	150481	.	+	.	Parent=CGI_10024719;
	scaffold780	WUBlastX	LINE_L2	150164	150481	151	-	.	.
scaffold780	subtractBed	intrn	149823	150161	.	+	.	Parent=CGI_10024719;
	scaffold780	WUBlastX	LINE_L2	149823	150161	93	-	.	.
scaffold780	subtractBed	intrn	149927	150487	.	+	.	Parent=CGI_10024719;
	scaffold780	WUBlastX	LINE_L2	149927	150487	101	-	.	.
scaffold780	subtractBed	intrn	163937	163963	.	+	.	Parent=CGI_10024719;
	scaffold780	TRF	Tandem_Repeat	163937	163963	54	+	.	.
scaffold780	subtractBed	intrn	166646	166681	.	-	.	Parent=CGI_10024720;
	scaffold780	TRF	Tandem_Repeat	166646	166681	72	+	.	.
scaffold780	subtractBed	intrn	168043	168099	.	-	.	Parent=CGI_10024720;
	scaffold780	TRF	Tandem_Repeat	168043	168099	55	+	.	.
scaffold780	subtractBed	intrn	197511	197693	.	-	.	Parent=CGI_10024722;
	scaffold780	TRF	Tandem_Repeat	197511	197693	262	+	.	.
scaffold780	subtractBed	intrn	208352	208398	.	+	.	Parent=CGI_10024723;
	scaffold780	TRF	Tandem_Repeat	208352	208398	94	+	.	.
scaffold780	subtractBed	intrn	216345	217037	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_L2	216345	217037	250	+	.	.
scaffold780	subtractBed	intrn	216240	216683	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_L2	216240	216683	34	+	.	.
scaffold780	subtractBed	intrn	223557	223838	.	+	.	Parent=CGI_10024723;
	scaffold780	TRF	Tandem_Repeat	223557	223838	444	+	.	.
scaffold780	subtractBed	intrn	232818	232844	.	+	.	Parent=CGI_10024723;
	scaffold780	TRF	Tandem_Repeat	232818	232844	54	+	.	.
scaffold780	subtractBed	intrn	234719	234770	.	+	.	Parent=CGI_10024723;
	scaffold780	TRF	Tandem_Repeat	234719	234770	104	+	.	.
scaffold780	subtractBed	intrn	229556	229837	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	229556	229837	41	+	.	.
scaffold780	subtractBed	intrn	232324	232605	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	232324	232605	41	+	.	.
scaffold780	subtractBed	intrn	229655	229840	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	229655	229840	74	+	.	.
scaffold780	subtractBed	intrn	232423	232608	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	232423	232608	74	+	.	.
scaffold780	subtractBed	intrn	229607	229846	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	229607	229846	50	+	.	.
scaffold780	subtractBed	intrn	232375	232614	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	232375	232614	50	+	.	.
scaffold780	subtractBed	intrn	229487	229879	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	229487	229879	33	+	.	.
scaffold780	subtractBed	intrn	232255	232647	.	+	.	Parent=CGI_10024723;
	scaffold780	WUBlastX	LINE_RTE-X	232255	232647	33	+	.	.
scaffold780	subtractBed	intrn	259141	260463	.	-	.	Parent=CGI_10024726;
	scaffold780	TRF	Tandem_Repeat	259141	260463	1525	+	.	.
scaffold780	subtractBed	intrn	288577	288894	.	+	.	Parent=CGI_10024727;
	scaffold780	TRF	Tandem_Repeat	288559	288894	292	+	.	.
scaffold780	subtractBed	intrn	308815	308879	.	+	.	Parent=CGI_10024728;
	scaffold780	TRF	Tandem_Repeat	308815	308879	130	+	.	.
scaffold780	subtractBed	intrn	310660	310711	.	+	.	Parent=CGI_10024728;
	scaffold780	TRF	Tandem_Repeat	310660	310711	86	+	.	.
scaffold780	subtractBed	intrn	328818	328871	.	+	.	Parent=CGI_10024729;
	scaffold780	TRF	Tandem_Repeat	328818	328871	108	+	.	.
scaffold780	subtractBed	intrn	328871	328906	.	+	.	Parent=CGI_10024729;
	scaffold780	TRF	Tandem_Repeat	328871	328906	72	+	.	.
scaffold780	subtractBed	intrn	343175	343205	.	-	.	Parent=CGI_10024730;
	scaffold780	TRF	Tandem_Repeat	343175	343205	62	+	.	.
scaffold780	subtractBed	intrn	368537	368989	.	-	.	Parent=CGI_10024731;
	scaffold780	WUBlastX	LINE_RTE-BovB	368537	368989	352	+	.	.
scaffold780	subtractBed	intrn	402262	402432	.	-	.	Parent=CGI_10024733;
	scaffold780	TRF	Tandem_Repeat	402262	402432	274	+	.	.
scaffold780	subtractBed	intrn	409485	409580	.	-	.	Parent=CGI_10024733;
	scaffold780	TRF	Tandem_Repeat	409485	409580	104	+	.	.
scaffold780	subtractBed	intrn	409485	409613	.	-	.	Parent=CGI_10024733;
	scaffold780	TRF	Tandem_Repeat	409485	409613	107	+	.	.
scaffold780	subtractBed	intrn	409485	409580	.	+	.	Parent=CGI_10024734;
	scaffold780	TRF	Tandem_Repeat	409485	409580	104	+	.	.
scaffold780	subtractBed	intrn	409485	409613	.	+	.	Parent=CGI_10024734;
	scaffold780	TRF	Tandem_Repeat	409485	409613	107	+	.	.
scaffold780	subtractBed	intrn	425704	425764	.	+	.	Parent=CGI_10024735;
	scaffold780	TRF	Tandem_Repeat	425704	425764	74	+	.	.
scaffold780	subtractBed	intrn	425704	425765	.	+	.	Parent=CGI_10024735;
	scaffold780	TRF	Tandem_Repeat	425704	425765	110	+	.	.
scaffold780	subtractBed	intrn	432439	433640	.	+	.	Parent=CGI_10024735;
	scaffold780	TRF	Tandem_Repeat	432439	433640	1800	+	.	.
scaffold780	subtractBed	intrn	440690	440732	.	+	.	Parent=CGI_10024736;
	scaffold780	TRF	Tandem_Repeat	440690	440732	86	+	.	.
scaffold780	subtractBed	intrn	441527	441586	.	+	.	Parent=CGI_10024736;
	scaffold780	TRF	Tandem_Repeat	441527	441586	120	+	.	.
scaffold780	subtractBed	intrn	440465	440617	.	+	.	Parent=CGI_10024736;
	scaffold780	WUBlastX	DNA_hAT-Hobo	440465	440617	71	-	.	.
scaffold780	subtractBed	intrn	460027	460089	.	-	.	Parent=CGI_10024737;
	scaffold780	TRF	Tandem_Repeat	460027	460089	67	+	.	.
scaffold780	subtractBed	intrn	460027	460089	.	-	.	Parent=CGI_10024737;
	scaffold780	TRF	Tandem_Repeat	460027	460089	58	+	.	.
scaffold780	subtractBed	intrn	460578	460607	.	-	.	Parent=CGI_10024737;
	scaffold780	TRF	Tandem_Repeat	460578	460607	60	+	.	.
scaffold780	subtractBed	intrn	464414	464460	.	-	.	Parent=CGI_10024737;
	scaffold780	TRF	Tandem_Repeat	464414	464460	85	+	.	.
scaffold780	subtractBed	intrn	465201	465387	.	-	.	Parent=CGI_10024737;
	scaffold780	WUBlastX	DNA_Maverick	465103	465387	32	-	.	.
scaffold780	subtractBed	intrn	472872	472898	.	+	.	Parent=CGI_10024738;
	scaffold780	TRF	Tandem_Repeat	472872	472898	54	+	.	.
scaffold780	subtractBed	intrn	662201	662259	.	+	.	Parent=CGI_10024741;
	scaffold780	TRF	Tandem_Repeat	662201	662259	63	+	.	.
scaffold780	subtractBed	intrn	662662	662702	.	+	.	Parent=CGI_10024741;
	scaffold780	TRF	Tandem_Repeat	662662	662702	57	+	.	.
scaffold780	subtractBed	intrn	694121	694250	.	-	.	Parent=CGI_10024742;
	scaffold780	TRF	Tandem_Repeat	694121	694250	93	+	.	.
scaffold780	subtractBed	intrn	694166	694312	.	-	.	Parent=CGI_10024742;
	scaffold780	TRF	Tandem_Repeat	694166	694312	73	+	.	.
scaffold780	subtractBed	intrn	695913	695956	.	-	.	Parent=CGI_10024742;
	scaffold780	TRF	Tandem_Repeat	695913	695956	72	+	.	.
scaffold780	subtractBed	intrn	708502	708739	.	-	.	Parent=CGI_10024744;
	scaffold780	TRF	Tandem_Repeat	708502	708739	442	+	.	.
scaffold780	subtractBed	intrn	708618	708722	.	-	.	Parent=CGI_10024744;
	scaffold780	TRF	Tandem_Repeat	708618	708722	52	+	.	.
scaffold780	subtractBed	intrn	737135	737179	.	+	.	Parent=CGI_10024745;
	scaffold780	TRF	Tandem_Repeat	737135	737179	90	+	.	.
scaffold780	subtractBed	intrn	740928	740978	.	+	.	Parent=CGI_10024745;
	scaffold780	TRF	Tandem_Repeat	740928	740978	102	+	.	.
scaffold780	subtractBed	intrn	742655	742755	.	+	.	Parent=CGI_10024745;
	scaffold780	TRF	Tandem_Repeat	742655	742755	166	+	.	.
scaffold780	subtractBed	intrn	742803	742838	.	+	.	Parent=CGI_10024745;
	scaffold780	TRF	Tandem_Repeat	742803	742838	72	+	.	.
scaffold780	subtractBed	intrn	811300	811351	.	-	.	Parent=CGI_10024747;
	scaffold780	TRF	Tandem_Repeat	811300	811351	104	+	.	.
scaffold780	subtractBed	intrn	811728	811764	.	-	.	Parent=CGI_10024747;
	scaffold780	TRF	Tandem_Repeat	811728	811764	74	+	.	.
scaffold780	subtractBed	intrn	811819	811863	.	-	.	Parent=CGI_10024747;
	scaffold780	TRF	Tandem_Repeat	811819	811863	83	+	.	.
scaffold780	subtractBed	intrn	965804	966241	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	965804	966241	163	+	.	.
scaffold780	subtractBed	intrn	965759	966301	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	965759	966301	125	+	.	.
scaffold780	subtractBed	intrn	965152	965664	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	965152	965664	45	+	.	.
scaffold780	subtractBed	intrn	965113	965403	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	965113	965403	100	+	.	.
scaffold780	subtractBed	intrn	968068	968217	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	968068	968217	95	-	.	.
scaffold780	subtractBed	intrn	966972	967148	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	966972	967148	47	-	.	.
scaffold780	subtractBed	intrn	966954	967268	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	966954	967268	27	-	.	.
scaffold780	subtractBed	intrn	967427	967678	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	967427	967678	83	-	.	.
scaffold780	subtractBed	intrn	967270	967527	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	967270	967527	105	-	.	.
scaffold780	subtractBed	intrn	967704	968060	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	967704	968060	172	-	.	.
scaffold780	subtractBed	intrn	968065	968241	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	968065	968241	60	-	.	.
scaffold780	subtractBed	intrn	966864	966968	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	966864	966968	20	+	.	.
scaffold780	subtractBed	intrn	966317	966928	.	-	.	Parent=CGI_10024749;
	scaffold780	WUBlastX	LTR_Ngaro	966317	966928	125	-	.	.
scaffold782	subtractBed	intrn	17359	17400	.	+	.	Parent=CGI_10010123;
	scaffold782	TRF	Tandem_Repeat	17359	17400	66	+	.	.
scaffold782	subtractBed	intrn	72538	72562	.	-	.	Parent=CGI_10010127;
	scaffold782	TRF	Tandem_Repeat	72538	72562	50	+	.	.
scaffold782	subtractBed	intrn	72719	72743	.	-	.	Parent=CGI_10010127;
	scaffold782	TRF	Tandem_Repeat	72719	72743	50	+	.	.
scaffold782	subtractBed	intrn	95294	95370	.	+	.	Parent=CGI_10010130;
	scaffold782	TRF	Tandem_Repeat	95294	95370	138	+	.	.
scaffold782	subtractBed	intrn	110767	110852	.	-	.	Parent=CGI_10010131;
	scaffold782	TRF	Tandem_Repeat	110767	110852	127	+	.	.
scaffold782	subtractBed	intrn	115863	116467	.	-	.	Parent=CGI_10010132;
	scaffold782	TRF	Tandem_Repeat	115863	116482	551	+	.	.
scaffold782	subtractBed	intrn	115863	116467	.	-	.	Parent=CGI_10010132;
	scaffold782	TRF	Tandem_Repeat	115863	116482	649	+	.	.
scaffold782	subtractBed	intrn	115863	116467	.	-	.	Parent=CGI_10010132;
	scaffold782	TRF	Tandem_Repeat	115863	116482	651	+	.	.
scaffold782	subtractBed	intrn	138302	138518	.	+	.	Parent=CGI_10010134;
	scaffold782	TRF	Tandem_Repeat	138302	138518	186	+	.	.
scaffold782	subtractBed	intrn	138302	138518	.	+	.	Parent=CGI_10010134;
	scaffold782	TRF	Tandem_Repeat	138302	138518	101	+	.	.
scaffold782	subtractBed	intrn	138305	138410	.	+	.	Parent=CGI_10010134;
	scaffold782	TRF	Tandem_Repeat	138305	138410	79	+	.	.
scaffold782	subtractBed	intrn	157992	158740	.	-	.	Parent=CGI_10010135;
	scaffold782	TRF	Tandem_Repeat	157992	158740	973	+	.	.
scaffold782	subtractBed	intrn	169417	169525	.	+	.	Parent=CGI_10010137;
	scaffold782	TRF	Tandem_Repeat	169417	169525	92	+	.	.
scaffold782	subtractBed	intrn	169417	169518	.	+	.	Parent=CGI_10010137;
	scaffold782	TRF	Tandem_Repeat	169417	169518	105	+	.	.
scaffold782	subtractBed	intrn	170219	170284	.	+	.	Parent=CGI_10010137;
	scaffold782	TRF	Tandem_Repeat	170219	170284	132	+	.	.
scaffold782	subtractBed	intrn	180396	180448	.	-	.	Parent=CGI_10010138;
	scaffold782	TRF	Tandem_Repeat	180396	180448	72	+	.	.
scaffold782	subtractBed	intrn	193177	193384	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	193177	193384	389	+	.	.
scaffold782	subtractBed	intrn	193253	193481	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	193253	193481	161	+	.	.
scaffold782	subtractBed	intrn	201280	201357	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	201280	201357	57	+	.	.
scaffold782	subtractBed	intrn	201594	201661	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	201594	201661	55	+	.	.
scaffold782	subtractBed	intrn	201125	201697	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	201125	201697	378	+	.	.
scaffold782	subtractBed	intrn	202550	202853	.	-	.	Parent=CGI_10010139;
	scaffold782	TRF	Tandem_Repeat	202550	202893	670	+	.	.
scaffold782	subtractBed	intrn	222202	222450	.	+	.	Parent=CGI_10010140;
	scaffold782	TRF	Tandem_Repeat	222202	222450	272	+	.	.
scaffold782	subtractBed	intrn	243332	243414	.	+	.	Parent=CGI_10010140;
	scaffold782	TRF	Tandem_Repeat	243332	243414	86	+	.	.
scaffold782	subtractBed	intrn	243332	243414	.	+	.	Parent=CGI_10010140;
	scaffold782	TRF	Tandem_Repeat	243332	243414	91	+	.	.
scaffold782	subtractBed	intrn	243332	243414	.	+	.	Parent=CGI_10010140;
	scaffold782	TRF	Tandem_Repeat	243332	243414	83	+	.	.
scaffold783	subtractBed	intrn	3328	3510	.	+	.	Parent=CGI_10011675;
	scaffold783	TRF	Tandem_Repeat	3328	3510	188	+	.	.
scaffold783	subtractBed	intrn	5876	5974	.	+	.	Parent=CGI_10011675;
	scaffold783	TRF	Tandem_Repeat	5876	5974	117	+	.	.
scaffold783	subtractBed	intrn	5875	5969	.	+	.	Parent=CGI_10011675;
	scaffold783	TRF	Tandem_Repeat	5875	5969	100	+	.	.
scaffold783	subtractBed	intrn	7169	7468	.	+	.	Parent=CGI_10011675;
	scaffold783	WUBlastX	LINE_RTE-X	7169	7468	112	-	.	.
scaffold783	subtractBed	intrn	7193	7525	.	+	.	Parent=CGI_10011675;
	scaffold783	WUBlastX	LINE_RTE-X	7193	7525	94	-	.	.
scaffold783	subtractBed	intrn	18811	18925	.	+	.	Parent=CGI_10011675;
	scaffold783	TRF	Tandem_Repeat	18811	18925	83	+	.	.
scaffold783	subtractBed	intrn	27276	27355	.	+	.	Parent=CGI_10011675;
	scaffold783	TRF	Tandem_Repeat	27276	27355	153	+	.	.
scaffold783	subtractBed	intrn	38979	39059	.	+	.	Parent=CGI_10011676;
	scaffold783	TRF	Tandem_Repeat	38979	39059	117	+	.	.
scaffold783	subtractBed	intrn	45665	45831	.	+	.	Parent=CGI_10011676;
	scaffold783	TRF	Tandem_Repeat	45665	45831	257	+	.	.
scaffold783	subtractBed	intrn	136101	136343	.	+	.	Parent=CGI_10011677;
	scaffold783	WUBlastX	LINE_RTE-X	136101	136343	74	-	.	.
scaffold783	subtractBed	intrn	136101	136271	.	+	.	Parent=CGI_10011677;
	scaffold783	WUBlastX	LINE_RTE-X	136101	136271	89	-	.	.
scaffold783	subtractBed	intrn	135984	136348	.	+	.	Parent=CGI_10011677;
	scaffold783	WUBlastX	LINE_RTE-X	135984	136460	73	-	.	.
scaffold783	subtractBed	intrn	145160	145202	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145160	145202	50	+	.	.
scaffold783	subtractBed	intrn	145160	145192	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145160	145192	52	+	.	.
scaffold783	subtractBed	intrn	145319	145369	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145319	145369	59	+	.	.
scaffold783	subtractBed	intrn	145318	145369	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145318	145369	63	+	.	.
scaffold783	subtractBed	intrn	145470	145520	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145470	145520	68	+	.	.
scaffold783	subtractBed	intrn	145469	145520	.	+	.	Parent=CGI_10011678;
	scaffold783	TRF	Tandem_Repeat	145469	145520	72	+	.	.
scaffold783	subtractBed	intrn	224025	224051	.	+	.	Parent=CGI_10011683;
	scaffold783	TRF	Tandem_Repeat	224025	224051	54	+	.	.
scaffold783	subtractBed	intrn	231132	231185	.	-	.	Parent=CGI_10011684;
	scaffold783	TRF	Tandem_Repeat	231132	231185	108	+	.	.
scaffold783	subtractBed	intrn	271561	271597	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	271561	271597	58	+	.	.
scaffold783	subtractBed	intrn	275745	275782	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	275745	275782	76	+	.	.
scaffold783	subtractBed	intrn	275953	275990	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	275953	275990	51	+	.	.
scaffold783	subtractBed	intrn	276011	276046	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	276011	276046	63	+	.	.
scaffold783	subtractBed	intrn	274069	274434	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	274069	274434	27	-	.	.
scaffold783	subtractBed	intrn	271733	273583	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	271733	273583	363	-	.	.
scaffold783	subtractBed	intrn	273407	273670	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	273407	273670	41	-	.	.
scaffold783	subtractBed	intrn	271733	273238	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	271733	273238	892	-	.	.
scaffold783	subtractBed	intrn	273374	273628	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	273374	273628	84	-	.	.
scaffold783	subtractBed	intrn	273706	274350	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	273706	274350	479	-	.	.
scaffold783	subtractBed	intrn	274749	274979	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	274749	274979	35	-	.	.
scaffold783	subtractBed	intrn	274460	274663	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LTR_Pao	274460	274663	24	-	.	.
scaffold783	subtractBed	intrn	280054	281102	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	280054	281102	723	+	.	.
scaffold783	subtractBed	intrn	287650	287752	.	+	.	Parent=CGI_10011687;
	scaffold783	TRF	Tandem_Repeat	287650	287752	181	+	.	.
scaffold783	subtractBed	intrn	287514	287648	.	+	.	Parent=CGI_10011687;
	scaffold783	WUBlastX	LINE_L1-Tx1	287514	287648	21	+	.	.
scaffold784	subtractBed	intrn	55983	56117	.	-	.	Parent=CGI_10024410;
	scaffold784	TRF	Tandem_Repeat	55983	56117	180	+	.	.
scaffold784	subtractBed	intrn	59229	59281	.	-	.	Parent=CGI_10024410;
	scaffold784	TRF	Tandem_Repeat	59229	59281	63	+	.	.
scaffold784	subtractBed	intrn	170280	170333	.	+	.	Parent=CGI_10024412;
	scaffold784	TRF	Tandem_Repeat	170280	170333	108	+	.	.
scaffold784	subtractBed	intrn	188269	189006	.	-	.	Parent=CGI_10024415;
	scaffold784	TRF	Tandem_Repeat	188269	189006	923	+	.	.
scaffold784	subtractBed	intrn	188260	189110	.	-	.	Parent=CGI_10024415;
	scaffold784	TRF	Tandem_Repeat	188260	189110	829	+	.	.
scaffold784	subtractBed	intrn	186619	186900	.	-	.	Parent=CGI_10024415;
	scaffold784	WUBlastX	LINE_L1	186619	186900	29	+	.	.
scaffold784	subtractBed	intrn	185848	186534	.	-	.	Parent=CGI_10024415;
	scaffold784	WUBlastX	LINE_L1	185848	186534	65	+	.	.
scaffold784	subtractBed	intrn	186019	186837	.	-	.	Parent=CGI_10024415;
	scaffold784	WUBlastX	LINE_L1-Tx1	186019	186837	225	+	.	.
scaffold784	subtractBed	intrn	251646	251673	.	-	.	Parent=CGI_10024419;
	scaffold784	TRF	Tandem_Repeat	251646	251673	56	+	.	.
scaffold784	subtractBed	intrn	306643	306729	.	-	.	Parent=CGI_10024422;
	scaffold784	TRF	Tandem_Repeat	306643	306729	122	+	.	.
scaffold784	subtractBed	intrn	303497	304150	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	303497	304150	159	+	.	.
scaffold784	subtractBed	intrn	303934	304200	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	303934	304200	63	+	.	.
scaffold784	subtractBed	intrn	303364	303600	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	303364	303600	276	+	.	.
scaffold784	subtractBed	intrn	306915	308758	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LTR_Gypsy	306915	309275	1349	-	.	.
scaffold784	subtractBed	intrn	306501	306614	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LTR_Gypsy	306501	306614	27	-	.	.
scaffold784	subtractBed	intrn	303602	303985	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	303602	303985	493	+	.	.
scaffold784	subtractBed	intrn	304251	304310	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	304251	304310	23	+	.	.
scaffold784	subtractBed	intrn	301210	302145	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	301210	302145	699	+	.	.
scaffold784	subtractBed	intrn	302142	303272	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	302142	303272	544	+	.	.
scaffold784	subtractBed	intrn	303159	303419	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_RTE-BovB	303159	303419	287	+	.	.
scaffold784	subtractBed	intrn	306410	306478	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LTR_Copia	306410	306478	30	-	.	.
scaffold784	subtractBed	intrn	304153	304299	.	-	.	Parent=CGI_10024422;
	scaffold784	WUBlastX	LINE_Proto2	304153	304299	26	+	.	.
scaffold784	subtractBed	intrn	326123	326158	.	+	.	Parent=CGI_10024423;
	scaffold784	TRF	Tandem_Repeat	326123	326158	72	+	.	.
scaffold784	subtractBed	intrn	328794	328825	.	+	.	Parent=CGI_10024423;
	scaffold784	TRF	Tandem_Repeat	328794	328825	55	+	.	.
scaffold784	subtractBed	intrn	333436	333477	.	+	.	Parent=CGI_10024423;
	scaffold784	TRF	Tandem_Repeat	333436	333477	84	+	.	.
scaffold784	subtractBed	intrn	336801	336841	.	+	.	Parent=CGI_10024423;
	scaffold784	TRF	Tandem_Repeat	336801	336841	55	+	.	.
scaffold784	subtractBed	intrn	348220	348256	.	+	.	Parent=CGI_10024424;
	scaffold784	TRF	Tandem_Repeat	348220	348256	74	+	.	.
scaffold784	subtractBed	intrn	348285	348322	.	+	.	Parent=CGI_10024424;
	scaffold784	TRF	Tandem_Repeat	348285	348322	76	+	.	.
scaffold784	subtractBed	intrn	348348	348406	.	+	.	Parent=CGI_10024424;
	scaffold784	TRF	Tandem_Repeat	348348	348406	118	+	.	.
scaffold784	subtractBed	intrn	349134	349180	.	+	.	Parent=CGI_10024424;
	scaffold784	TRF	Tandem_Repeat	349134	349180	76	+	.	.
scaffold784	subtractBed	intrn	349228	349252	.	+	.	Parent=CGI_10024424;
	scaffold784	TRF	Tandem_Repeat	349228	349252	50	+	.	.
scaffold784	subtractBed	intrn	357742	357806	.	-	.	Parent=CGI_10024426;
	scaffold784	TRF	Tandem_Repeat	357742	357806	130	+	.	.
scaffold784	subtractBed	intrn	365045	365083	.	-	.	Parent=CGI_10024427;
	scaffold784	TRF	Tandem_Repeat	365045	365083	78	+	.	.
scaffold784	subtractBed	intrn	366673	366703	.	-	.	Parent=CGI_10024427;
	scaffold784	TRF	Tandem_Repeat	366673	366703	62	+	.	.
scaffold784	subtractBed	intrn	368825	368866	.	-	.	Parent=CGI_10024427;
	scaffold784	TRF	Tandem_Repeat	368825	368866	84	+	.	.
scaffold784	subtractBed	intrn	374293	374338	.	+	.	Parent=CGI_10024428;
	scaffold784	TRF	Tandem_Repeat	374293	374338	92	+	.	.
scaffold784	subtractBed	intrn	452721	452846	.	+	.	Parent=CGI_10024430;
	scaffold784	TRF	Tandem_Repeat	452721	452846	227	+	.	.
scaffold784	subtractBed	intrn	453708	453923	.	+	.	Parent=CGI_10024430;
	scaffold784	WUBlastX	LINE_RTE-X	453708	453923	58	+	.	.
scaffold784	subtractBed	intrn	514835	515056	.	+	.	Parent=CGI_10024431;
	scaffold784	TRF	Tandem_Repeat	514835	515056	129	+	.	.
scaffold784	subtractBed	intrn	543434	543713	.	+	.	Parent=CGI_10024433;
	scaffold784	TRF	Tandem_Repeat	543434	543713	186	+	.	.
scaffold784	subtractBed	intrn	543751	544145	.	+	.	Parent=CGI_10024433;
	scaffold784	TRF	Tandem_Repeat	543751	544145	329	+	.	.
scaffold784	subtractBed	intrn	624486	624489	.	+	.	Parent=CGI_10024437;
	scaffold784	WUBlastX	LINE_CR1-L2	624397	624489	45	-	.	.
scaffold784	subtractBed	intrn	624486	624507	.	+	.	Parent=CGI_10024437;
	scaffold784	WUBlastX	LINE_L2	624400	624507	32	-	.	.
scaffold784	subtractBed	intrn	624519	624824	.	+	.	Parent=CGI_10024437;
	scaffold784	WUBlastX	LINE_L2	624519	624824	90	-	.	.
scaffold784	subtractBed	intrn	631080	631175	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631080	631175	104	+	.	.
scaffold784	subtractBed	intrn	631083	631174	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631083	631174	77	+	.	.
scaffold784	subtractBed	intrn	631200	631312	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631200	631312	50	+	.	.
scaffold784	subtractBed	intrn	631189	631271	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631189	631271	71	+	.	.
scaffold784	subtractBed	intrn	631196	631308	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631196	631308	62	+	.	.
scaffold784	subtractBed	intrn	631201	631301	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	631201	631301	123	+	.	.
scaffold784	subtractBed	intrn	633831	633881	.	+	.	Parent=CGI_10024437;
	scaffold784	TRF	Tandem_Repeat	633831	633881	102	+	.	.
scaffold784	subtractBed	intrn	672798	672869	.	+	.	Parent=CGI_10024439;
	scaffold784	TRF	Tandem_Repeat	672798	672869	121	+	.	.
scaffold784	subtractBed	intrn	758106	758162	.	+	.	Parent=CGI_10024441;
	scaffold784	TRF	Tandem_Repeat	758106	758162	114	+	.	.
scaffold784	subtractBed	intrn	758640	759766	.	+	.	Parent=CGI_10024441;
	scaffold784	TRF	Tandem_Repeat	758640	759766	1684	+	.	.
scaffold784	subtractBed	intrn	764105	764145	.	+	.	Parent=CGI_10024441;
	scaffold784	TRF	Tandem_Repeat	764105	764145	82	+	.	.
scaffold784	subtractBed	intrn	765515	765873	.	+	.	Parent=CGI_10024441;
	scaffold784	TRF	Tandem_Repeat	765515	765873	356	+	.	.
scaffold784	subtractBed	intrn	777267	777619	.	-	.	Parent=CGI_10024442;
	scaffold784	TRF	Tandem_Repeat	777267	777619	431	+	.	.
scaffold784	subtractBed	intrn	782988	784060	.	-	.	Parent=CGI_10024442;
	scaffold784	TRF	Tandem_Repeat	782988	784060	1138	+	.	.
scaffold784	subtractBed	intrn	784229	784268	.	-	.	Parent=CGI_10024442;
	scaffold784	TRF	Tandem_Repeat	784229	784268	53	+	.	.
scaffold784	subtractBed	intrn	820177	820226	.	+	.	Parent=CGI_10024443;
	scaffold784	TRF	Tandem_Repeat	820177	820226	100	+	.	.
scaffold784	subtractBed	intrn	821275	821309	.	+	.	Parent=CGI_10024443;
	scaffold784	TRF	Tandem_Repeat	821275	821309	70	+	.	.
scaffold784	subtractBed	intrn	850158	850667	.	-	.	Parent=CGI_10024446;
	scaffold784	WUBlastX	LINE_L2	850158	850667	35	+	.	.
scaffold784	subtractBed	intrn	850353	850625	.	-	.	Parent=CGI_10024446;
	scaffold784	WUBlastX	LINE_RTE-X	850353	850625	94	+	.	.
scaffold784	subtractBed	intrn	850308	850655	.	-	.	Parent=CGI_10024446;
	scaffold784	WUBlastX	LINE_L2	850308	850655	44	+	.	.
scaffold784	subtractBed	intrn	850320	850745	.	-	.	Parent=CGI_10024446;
	scaffold784	WUBlastX	LINE_I	850320	850745	31	+	.	.
scaffold784	subtractBed	intrn	852063	852111	.	-	.	Parent=CGI_10024446;
	scaffold784	TRF	Tandem_Repeat	852063	852111	73	+	.	.
scaffold784	subtractBed	intrn	852063	852117	.	-	.	Parent=CGI_10024446;
	scaffold784	TRF	Tandem_Repeat	852063	852117	71	+	.	.
scaffold784	subtractBed	intrn	858232	858263	.	-	.	Parent=CGI_10024447;
	scaffold784	TRF	Tandem_Repeat	858232	858263	64	+	.	.
scaffold784	subtractBed	intrn	908032	908340	.	+	.	Parent=CGI_10024450;
	scaffold784	WUBlastX	DNA_TcMar-Marin	908032	908340	198	-	.	.
scaffold784	subtractBed	intrn	908603	909262	.	+	.	Parent=CGI_10024450;
	scaffold784	WUBlastX	DNA_TcMar-Marin	908603	909262	241	-	.	.
scaffold784	subtractBed	intrn	908143	908385	.	+	.	Parent=CGI_10024450;
	scaffold784	WUBlastX	DNA_TcMar-Tc1	908143	908385	75	-	.	.
scaffold784	subtractBed	intrn	912413	913732	.	+	.	Parent=CGI_10024450;
	scaffold784	TRF	Tandem_Repeat	912413	913732	1714	+	.	.
scaffold786	subtractBed	intrn	24311	24483	.	-	.	Parent=CGI_10013691;
	scaffold786	TRF	Tandem_Repeat	24311	24483	319	+	.	.
scaffold786	subtractBed	intrn	24560	24730	.	-	.	Parent=CGI_10013691;
	scaffold786	TRF	Tandem_Repeat	24560	24730	146	+	.	.
scaffold786	subtractBed	intrn	27898	28109	.	-	.	Parent=CGI_10013691;
	scaffold786	TRF	Tandem_Repeat	27898	28109	424	+	.	.
scaffold786	subtractBed	intrn	62873	63345	.	+	.	Parent=CGI_10013693;
	scaffold786	TRF	Tandem_Repeat	62873	63345	836	+	.	.
scaffold786	subtractBed	intrn	80516	80572	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	80516	80572	105	+	.	.
scaffold786	subtractBed	intrn	84518	84822	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	84518	84822	537	+	.	.
scaffold786	subtractBed	intrn	86878	86999	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	86878	86999	199	+	.	.
scaffold786	subtractBed	intrn	90287	90507	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	90287	90507	240	+	.	.
scaffold786	subtractBed	intrn	91226	91276	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	91226	91276	102	+	.	.
scaffold786	subtractBed	intrn	91274	91316	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	91274	91316	86	+	.	.
scaffold786	subtractBed	intrn	92802	92828	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	92802	92828	54	+	.	.
scaffold786	subtractBed	intrn	92922	92988	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	92922	92988	134	+	.	.
scaffold786	subtractBed	intrn	99635	100745	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	99635	100745	1460	+	.	.
scaffold786	subtractBed	intrn	102201	103092	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	102201	103092	464	+	.	.
scaffold786	subtractBed	intrn	102219	103095	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	102219	103095	708	+	.	.
scaffold786	subtractBed	intrn	102219	103095	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	102219	103095	733	+	.	.
scaffold786	subtractBed	intrn	103326	103701	.	-	.	Parent=CGI_10013694;
	scaffold786	TRF	Tandem_Repeat	103326	103701	736	+	.	.
scaffold786	subtractBed	intrn	86878	86999	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	86878	86999	199	+	.	.
scaffold786	subtractBed	intrn	90287	90507	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	90287	90507	240	+	.	.
scaffold786	subtractBed	intrn	91226	91276	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	91226	91276	102	+	.	.
scaffold786	subtractBed	intrn	91274	91316	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	91274	91316	86	+	.	.
scaffold786	subtractBed	intrn	92802	92828	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	92802	92828	54	+	.	.
scaffold786	subtractBed	intrn	92922	92988	.	+	.	Parent=CGI_10013695;
	scaffold786	TRF	Tandem_Repeat	92922	92988	134	+	.	.
scaffold786	subtractBed	intrn	112997	113420	.	+	.	Parent=CGI_10013696;
	scaffold786	TRF	Tandem_Repeat	112997	113420	338	+	.	.
scaffold786	subtractBed	intrn	117790	118254	.	+	.	Parent=CGI_10013696;
	scaffold786	TRF	Tandem_Repeat	117790	118254	813	+	.	.
scaffold786	subtractBed	intrn	120091	120466	.	+	.	Parent=CGI_10013696;
	scaffold786	TRF	Tandem_Repeat	120091	120466	608	+	.	.
scaffold786	subtractBed	intrn	125381	126320	.	+	.	Parent=CGI_10013696;
	scaffold786	TRF	Tandem_Repeat	125381	126320	1235	+	.	.
scaffold786	subtractBed	intrn	120091	120466	.	-	.	Parent=CGI_10013697;
	scaffold786	TRF	Tandem_Repeat	120091	120466	608	+	.	.
scaffold786	subtractBed	intrn	137879	138209	.	+	.	Parent=CGI_10013699;
	scaffold786	TRF	Tandem_Repeat	137879	138209	361	+	.	.
scaffold786	subtractBed	intrn	157708	157866	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	157708	157866	248	+	.	.
scaffold786	subtractBed	intrn	158558	158588	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	158558	158588	55	+	.	.
scaffold786	subtractBed	intrn	159143	159173	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	159143	159173	53	+	.	.
scaffold786	subtractBed	intrn	159220	159258	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	159220	159258	78	+	.	.
scaffold786	subtractBed	intrn	164360	164384	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	164360	164384	50	+	.	.
scaffold786	subtractBed	intrn	164646	164683	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	164646	164683	76	+	.	.
scaffold786	subtractBed	intrn	166234	166272	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	166234	166272	69	+	.	.
scaffold786	subtractBed	intrn	172123	172285	.	+	.	Parent=CGI_10013700;
	scaffold786	TRF	Tandem_Repeat	172123	172285	290	+	.	.
scaffold786	subtractBed	intrn	247146	248298	.	-	.	Parent=CGI_10013704;
	scaffold786	TRF	Tandem_Repeat	247146	248298	1150	+	.	.
scaffold786	subtractBed	intrn	261775	261851	.	-	.	Parent=CGI_10013704;
	scaffold786	TRF	Tandem_Repeat	261775	261851	138	+	.	.
scaffold786	subtractBed	intrn	265053	265097	.	-	.	Parent=CGI_10013704;
	scaffold786	TRF	Tandem_Repeat	265053	265097	90	+	.	.
scaffold786	subtractBed	intrn	269485	269641	.	+	.	Parent=CGI_10013705;
	scaffold786	TRF	Tandem_Repeat	269485	269641	157	+	.	.
scaffold786	subtractBed	intrn	272521	272805	.	+	.	Parent=CGI_10013705;
	scaffold786	WUBlastX	LINE_RTE-X	272521	272805	100	-	.	.
scaffold786	subtractBed	intrn	272404	272817	.	+	.	Parent=CGI_10013705;
	scaffold786	WUBlastX	LINE_RTE-X	272404	272817	77	-	.	.
scaffold786	subtractBed	intrn	274609	274641	.	+	.	Parent=CGI_10013705;
	scaffold786	TRF	Tandem_Repeat	274609	274641	57	+	.	.
scaffold786	subtractBed	intrn	276574	276716	.	+	.	Parent=CGI_10013705;
	scaffold786	TRF	Tandem_Repeat	276574	276716	214	+	.	.
scaffold786	subtractBed	intrn	302205	302231	.	-	.	Parent=CGI_10013707;
	scaffold786	TRF	Tandem_Repeat	302205	302231	54	+	.	.
scaffold786	subtractBed	intrn	346474	346827	.	+	.	Parent=CGI_10013708;
	scaffold786	WUBlastX	LINE_L1-Tx1	346474	346827	28	+	.	.
scaffold786	subtractBed	intrn	347157	347351	.	+	.	Parent=CGI_10013708;
	scaffold786	WUBlastX	LINE_L1-Tx1	347157	347351	50	+	.	.
scaffold786	subtractBed	intrn	346471	346725	.	+	.	Parent=CGI_10013708;
	scaffold786	WUBlastX	LINE_L1-Tx1	346471	346725	50	+	.	.
scaffold786	subtractBed	intrn	344133	344405	.	+	.	Parent=CGI_10013708;
	scaffold786	WUBlastX	DNA_IS4EU	344133	344405	105	+	.	.
scaffold786	subtractBed	intrn	346234	346623	.	+	.	Parent=CGI_10013708;
	scaffold786	WUBlastX	LINE_L1-Tx1	346234	346623	55	+	.	.
scaffold786	subtractBed	intrn	360890	361037	.	-	.	Parent=CGI_10013709;
	scaffold786	TRF	Tandem_Repeat	360890	361037	179	+	.	.
scaffold786	subtractBed	intrn	361187	361274	.	-	.	Parent=CGI_10013709;
	scaffold786	TRF	Tandem_Repeat	361187	361274	59	+	.	.
scaffold786	subtractBed	intrn	364848	365168	.	-	.	Parent=CGI_10013709;
	scaffold786	WUBlastX	DNA_TcMar-Marin	364848	365168	94	+	.	.
scaffold786	subtractBed	intrn	364475	364915	.	-	.	Parent=CGI_10013709;
	scaffold786	WUBlastX	DNA_TcMar-Marin	364475	364915	137	+	.	.
scaffold787	subtractBed	intrn	18693	18768	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	18693	18768	84	+	.	.
scaffold787	subtractBed	intrn	18661	18757	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	18661	18757	131	+	.	.
scaffold787	subtractBed	intrn	19225	19470	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	19225	19489	437	+	.	.
scaffold787	subtractBed	intrn	19961	20330	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	19961	20356	390	+	.	.
scaffold787	subtractBed	intrn	19941	20201	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	19941	20201	369	+	.	.
scaffold787	subtractBed	intrn	20694	20779	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	20694	20779	59	+	.	.
scaffold787	subtractBed	intrn	23872	24029	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	23872	24029	104	+	.	.
scaffold787	subtractBed	intrn	23915	24073	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	23915	24073	137	+	.	.
scaffold787	subtractBed	intrn	23942	24029	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	23942	24029	57	+	.	.
scaffold787	subtractBed	intrn	23989	24055	.	-	.	Parent=CGI_10011644;
	scaffold787	TRF	Tandem_Repeat	23989	24055	64	+	.	.
scaffold787	subtractBed	intrn	161004	161040	.	+	.	Parent=CGI_10011647;
	scaffold787	TRF	Tandem_Repeat	161004	161040	56	+	.	.
scaffold787	subtractBed	intrn	191677	192839	.	+	.	Parent=CGI_10011648;
	scaffold787	TRF	Tandem_Repeat	191677	192839	1717	+	.	.
scaffold787	subtractBed	intrn	230259	230383	.	-	.	Parent=CGI_10011650;
	scaffold787	TRF	Tandem_Repeat	230259	230383	90	+	.	.
scaffold787	subtractBed	intrn	233852	235051	.	-	.	Parent=CGI_10011650;
	scaffold787	WUBlastX	DNA_hAT-Blackja	233852	235051	351	-	.	.
scaffold787	subtractBed	intrn	233858	234856	.	-	.	Parent=CGI_10011650;
	scaffold787	WUBlastX	DNA_hAT-Blackja	233858	234856	365	-	.	.
scaffold787	subtractBed	intrn	242077	242286	.	-	.	Parent=CGI_10011650;
	scaffold787	WUBlastX	LINE_RTE-X	242077	242286	66	+	.	.
scaffold787	subtractBed	intrn	260763	260787	.	+	.	Parent=CGI_10011651;
	scaffold787	TRF	Tandem_Repeat	260763	260787	50	+	.	.
scaffold787	subtractBed	intrn	261763	261796	.	+	.	Parent=CGI_10011651;
	scaffold787	TRF	Tandem_Repeat	261763	261796	68	+	.	.
scaffold787	subtractBed	intrn	264667	264714	.	+	.	Parent=CGI_10011651;
	scaffold787	TRF	Tandem_Repeat	264667	264714	96	+	.	.
scaffold787	subtractBed	intrn	264714	264755	.	+	.	Parent=CGI_10011651;
	scaffold787	TRF	Tandem_Repeat	264714	264755	84	+	.	.
scaffold787	subtractBed	intrn	272200	272313	.	+	.	Parent=CGI_10011651;
	scaffold787	TRF	Tandem_Repeat	272200	272313	102	+	.	.
scaffold787	subtractBed	intrn	288573	289724	.	-	.	Parent=CGI_10011652;
	scaffold787	TRF	Tandem_Repeat	288573	289724	1179	+	.	.
scaffold789	subtractBed	intrn	11973	11998	.	-	.	Parent=CGI_10017177;
	scaffold789	TRF	Tandem_Repeat	11973	11998	52	+	.	.
scaffold789	subtractBed	intrn	36571	36608	.	-	.	Parent=CGI_10017177;
	scaffold789	TRF	Tandem_Repeat	36571	36608	58	+	.	.
scaffold789	subtractBed	intrn	71273	71276	.	+	.	Parent=CGI_10017180;
	scaffold789	WUBlastX	DNA_hAT	71273	72898	404	+	.	.
scaffold789	subtractBed	intrn	95750	96331	.	-	.	Parent=CGI_10017181;
	scaffold789	WUBlastX	LINE_R2-Hero	95750	96331	139	+	.	.
scaffold789	subtractBed	intrn	96646	96738	.	-	.	Parent=CGI_10017181;
	scaffold789	WUBlastX	LINE_R2-Hero	96646	96738	24	+	.	.
scaffold789	subtractBed	intrn	106965	107018	.	-	.	Parent=CGI_10017184;
	scaffold789	TRF	Tandem_Repeat	106965	107018	101	+	.	.
scaffold789	subtractBed	intrn	247982	248037	.	-	.	Parent=CGI_10017199;
	scaffold789	TRF	Tandem_Repeat	247982	248037	103	+	.	.
scaffold789	subtractBed	intrn	249826	249868	.	-	.	Parent=CGI_10017199;
	scaffold789	TRF	Tandem_Repeat	249826	249868	50	+	.	.
scaffold789	subtractBed	intrn	286789	287106	.	+	.	Parent=CGI_10017200;
	scaffold789	TRF	Tandem_Repeat	286789	287106	413	+	.	.
scaffold789	subtractBed	intrn	286777	287106	.	+	.	Parent=CGI_10017200;
	scaffold789	TRF	Tandem_Repeat	286777	287106	294	+	.	.
scaffold789	subtractBed	intrn	286959	287106	.	+	.	Parent=CGI_10017200;
	scaffold789	TRF	Tandem_Repeat	286959	287106	170	+	.	.
scaffold789	subtractBed	intrn	288363	288571	.	+	.	Parent=CGI_10017200;
	scaffold789	TRF	Tandem_Repeat	288363	288575	275	+	.	.
scaffold789	subtractBed	intrn	323482	323829	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	323482	323829	126	+	.	.
scaffold789	subtractBed	intrn	322330	322752	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	322330	322752	46	+	.	.
scaffold789	subtractBed	intrn	323617	323877	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	323617	323877	155	+	.	.
scaffold789	subtractBed	intrn	322510	322749	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	322510	322749	46	+	.	.
scaffold789	subtractBed	intrn	323620	323952	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	323620	323952	83	+	.	.
scaffold789	subtractBed	intrn	323626	324021	.	+	.	Parent=CGI_10017201;
	scaffold789	WUBlastX	LTR_Gypsy	323626	324021	68	+	.	.
scaffold789	subtractBed	intrn	336707	336749	.	+	.	Parent=CGI_10017202;
	scaffold789	TRF	Tandem_Repeat	336707	336749	86	+	.	.
scaffold789	subtractBed	intrn	453845	453892	.	+	.	Parent=CGI_10017205;
	scaffold789	WUBlastX	LINE_L1	453845	453892	21	+	.	.
scaffold789	subtractBed	intrn	451402	452883	.	+	.	Parent=CGI_10017205;
	scaffold789	WUBlastX	LINE_CR1	451402	452883	625	+	.	.
scaffold789	subtractBed	intrn	452887	453750	.	+	.	Parent=CGI_10017205;
	scaffold789	WUBlastX	LINE_CR1	452887	453750	576	+	.	.
scaffold789	subtractBed	intrn	451687	452877	.	+	.	Parent=CGI_10017205;
	scaffold789	WUBlastX	LINE_CR1	451687	452877	645	+	.	.
scaffold789	subtractBed	intrn	475312	475347	.	-	.	Parent=CGI_10017210;
	scaffold789	TRF	Tandem_Repeat	475312	475347	72	+	.	.
scaffold79	subtractBed	intrn	180775	180972	.	+	.	Parent=CGI_10024616;
	scaffold79	TRF	Tandem_Repeat	180750	180972	383	+	.	.
scaffold79	subtractBed	intrn	189612	189743	.	+	.	Parent=CGI_10024616;
	scaffold79	TRF	Tandem_Repeat	189612	189743	112	+	.	.
scaffold79	subtractBed	intrn	189605	189827	.	+	.	Parent=CGI_10024616;
	scaffold79	TRF	Tandem_Repeat	189605	189827	188	+	.	.
scaffold79	subtractBed	intrn	189606	189744	.	+	.	Parent=CGI_10024616;
	scaffold79	TRF	Tandem_Repeat	189606	189744	95	+	.	.
scaffold79	subtractBed	intrn	192152	192201	.	+	.	Parent=CGI_10024616;
	scaffold79	TRF	Tandem_Repeat	192152	192201	91	+	.	.
scaffold79	subtractBed	intrn	209535	209623	.	+	.	Parent=CGI_10024618;
	scaffold79	TRF	Tandem_Repeat	209535	209623	72	+	.	.
scaffold79	subtractBed	intrn	209534	209615	.	+	.	Parent=CGI_10024618;
	scaffold79	TRF	Tandem_Repeat	209534	209615	52	+	.	.
scaffold79	subtractBed	intrn	212710	212859	.	+	.	Parent=CGI_10024618;
	scaffold79	WUBlastX	LINE_RTE-X	212710	212859	26	-	.	.
scaffold79	subtractBed	intrn	259924	259949	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	259924	259949	52	+	.	.
scaffold79	subtractBed	intrn	257530	257667	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_Harbinger	257530	257667	33	+	.	.
scaffold79	subtractBed	intrn	257455	257634	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_Harbinger	257455	257634	84	+	.	.
scaffold79	subtractBed	intrn	257413	257628	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_Harbinger	257413	257628	20	+	.	.
scaffold79	subtractBed	intrn	257691	258185	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_Harbinger	257691	258185	179	+	.	.
scaffold79	subtractBed	intrn	261216	261521	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	261216	261521	66	-	.	.
scaffold79	subtractBed	intrn	261611	261952	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	261611	261952	67	-	.	.
scaffold79	subtractBed	intrn	261611	262045	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	261611	262045	47	-	.	.
scaffold79	subtractBed	intrn	263163	263486	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	263163	263486	259	+	.	.
scaffold79	subtractBed	intrn	263163	263274	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	263163	263274	145	+	.	.
scaffold79	subtractBed	intrn	263313	263423	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	263313	263423	127	+	.	.
scaffold79	subtractBed	intrn	266082	266357	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	LINE_RTE-X	266082	266357	66	+	.	.
scaffold79	subtractBed	intrn	266070	266399	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	LINE_RTE-X	266070	266399	47	+	.	.
scaffold79	subtractBed	intrn	266088	266270	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	LINE_RTE-X	266088	266270	93	+	.	.
scaffold79	subtractBed	intrn	265873	266067	.	+	.	Parent=CGI_10024620;
	scaffold79	WUBlastX	LINE_RTE-X	265873	266067	41	+	.	.
scaffold79	subtractBed	intrn	262141	262328	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	262141	262328	190	+	.	.
scaffold79	subtractBed	intrn	269824	269870	.	+	.	Parent=CGI_10024620;
	scaffold79	TRF	Tandem_Repeat	269824	269870	58	+	.	.
scaffold79	subtractBed	intrn	316993	317069	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	316993	317069	93	+	.	.
scaffold79	subtractBed	intrn	317083	318044	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	317083	318044	1456	+	.	.
scaffold79	subtractBed	intrn	324843	324883	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	324843	324883	82	+	.	.
scaffold79	subtractBed	intrn	326659	326954	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	326659	326954	359	+	.	.
scaffold79	subtractBed	intrn	326652	327147	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	326652	327147	256	+	.	.
scaffold79	subtractBed	intrn	385583	385626	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	385583	385626	88	+	.	.
scaffold79	subtractBed	intrn	386533	387433	.	+	.	Parent=CGI_10024624;
	scaffold79	TRF	Tandem_Repeat	386490	387433	1816	+	.	.
scaffold79	subtractBed	intrn	408598	408659	.	+	.	Parent=CGI_10024626;
	scaffold79	TRF	Tandem_Repeat	408598	408659	108	+	.	.
scaffold79	subtractBed	intrn	424384	424414	.	+	.	Parent=CGI_10024627;
	scaffold79	TRF	Tandem_Repeat	424384	424414	62	+	.	.
scaffold79	subtractBed	intrn	424354	424440	.	+	.	Parent=CGI_10024627;
	scaffold79	TRF	Tandem_Repeat	424354	424440	79	+	.	.
scaffold79	subtractBed	intrn	424384	424414	.	-	.	Parent=CGI_10024628;
	scaffold79	TRF	Tandem_Repeat	424384	424414	62	+	.	.
scaffold79	subtractBed	intrn	424354	424440	.	-	.	Parent=CGI_10024628;
	scaffold79	TRF	Tandem_Repeat	424354	424440	79	+	.	.
scaffold79	subtractBed	intrn	435558	435584	.	-	.	Parent=CGI_10024629;
	scaffold79	TRF	Tandem_Repeat	435558	435584	54	+	.	.
scaffold79	subtractBed	intrn	438301	438336	.	-	.	Parent=CGI_10024629;
	scaffold79	TRF	Tandem_Repeat	438301	438336	72	+	.	.
scaffold79	subtractBed	intrn	521281	521341	.	-	.	Parent=CGI_10024633;
	scaffold79	TRF	Tandem_Repeat	521281	521341	113	+	.	.
scaffold79	subtractBed	intrn	551177	551223	.	-	.	Parent=CGI_10024635;
	scaffold79	TRF	Tandem_Repeat	551177	551223	67	+	.	.
scaffold79	subtractBed	intrn	582820	582850	.	+	.	Parent=CGI_10024637;
	scaffold79	TRF	Tandem_Repeat	582820	582850	62	+	.	.
scaffold79	subtractBed	intrn	623071	623103	.	+	.	Parent=CGI_10024639;
	scaffold79	TRF	Tandem_Repeat	623071	623103	66	+	.	.
scaffold79	subtractBed	intrn	624935	624983	.	+	.	Parent=CGI_10024639;
	scaffold79	TRF	Tandem_Repeat	624935	624983	98	+	.	.
scaffold79	subtractBed	intrn	677098	677902	.	+	.	Parent=CGI_10024642;
	scaffold79	TRF	Tandem_Repeat	677098	677902	1193	+	.	.
scaffold79	subtractBed	intrn	750658	750722	.	+	.	Parent=CGI_10024644;
	scaffold79	TRF	Tandem_Repeat	750658	750722	121	+	.	.
scaffold79	subtractBed	intrn	761573	761654	.	+	.	Parent=CGI_10024645;
	scaffold79	TRF	Tandem_Repeat	761573	761654	155	+	.	.
scaffold79	subtractBed	intrn	775808	775987	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	775808	775987	141	+	.	.
scaffold79	subtractBed	intrn	775839	776054	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	775839	776054	190	+	.	.
scaffold79	subtractBed	intrn	781563	781592	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	781563	781592	51	+	.	.
scaffold79	subtractBed	intrn	795655	795696	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	795655	795696	84	+	.	.
scaffold79	subtractBed	intrn	796376	796411	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	796376	796411	72	+	.	.
scaffold79	subtractBed	intrn	807401	807451	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	807401	807451	102	+	.	.
scaffold79	subtractBed	intrn	818960	819022	.	-	.	Parent=CGI_10024646;
	scaffold79	TRF	Tandem_Repeat	818960	819022	126	+	.	.
scaffold79	subtractBed	intrn	775808	775987	.	+	.	Parent=CGI_10024647;
	scaffold79	TRF	Tandem_Repeat	775808	775987	141	+	.	.
scaffold79	subtractBed	intrn	775839	776054	.	+	.	Parent=CGI_10024647;
	scaffold79	TRF	Tandem_Repeat	775839	776054	190	+	.	.
scaffold79	subtractBed	intrn	845195	845320	.	-	.	Parent=CGI_10024651;
	scaffold79	TRF	Tandem_Repeat	845195	845320	76	+	.	.
scaffold79	subtractBed	intrn	845319	845489	.	-	.	Parent=CGI_10024651;
	scaffold79	TRF	Tandem_Repeat	845319	845489	171	+	.	.
scaffold79	subtractBed	intrn	846194	846265	.	-	.	Parent=CGI_10024651;
	scaffold79	TRF	Tandem_Repeat	846194	846265	135	+	.	.
scaffold79	subtractBed	intrn	873586	873705	.	-	.	Parent=CGI_10024652;
	scaffold79	WUBlastX	DNA_TcMar-IS885	873586	873705	22	-	.	.
scaffold79	subtractBed	intrn	873281	873499	.	-	.	Parent=CGI_10024652;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	873281	873499	47	-	.	.
scaffold79	subtractBed	intrn	873314	873559	.	-	.	Parent=CGI_10024652;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	873314	873559	25	-	.	.
scaffold79	subtractBed	intrn	872781	873314	.	-	.	Parent=CGI_10024652;
	scaffold79	WUBlastX	DNA_TcMar-Tc1	872781	873314	299	-	.	.
scaffold79	subtractBed	intrn	883829	883890	.	+	.	Parent=CGI_10024653;
	scaffold79	TRF	Tandem_Repeat	883829	883890	72	+	.	.
scaffold79	subtractBed	intrn	883829	883890	.	+	.	Parent=CGI_10024653;
	scaffold79	TRF	Tandem_Repeat	883829	883890	90	+	.	.
scaffold79	subtractBed	intrn	886758	887360	.	+	.	Parent=CGI_10024653;
	scaffold79	WUBlastX	LINE_L1-Tx1	886758	887360	35	-	.	.
scaffold79	subtractBed	intrn	886641	887588	.	+	.	Parent=CGI_10024653;
	scaffold79	WUBlastX	LINE_L1-Tx1	886641	887588	20	-	.	.
scaffold79	subtractBed	intrn	900684	900772	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	900684	900772	56	+	.	.
scaffold79	subtractBed	intrn	900609	900836	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	900609	900836	97	+	.	.
scaffold79	subtractBed	intrn	900950	901048	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	900950	901048	78	+	.	.
scaffold79	subtractBed	intrn	901278	901359	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	901278	901359	78	+	.	.
scaffold79	subtractBed	intrn	901511	901576	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	901511	901576	57	+	.	.
scaffold79	subtractBed	intrn	901623	901710	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	901623	901710	56	+	.	.
scaffold79	subtractBed	intrn	901655	901759	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	901655	901759	56	+	.	.
scaffold79	subtractBed	intrn	901938	901995	.	+	.	Parent=CGI_10024655;
	scaffold79	TRF	Tandem_Repeat	901938	901995	59	+	.	.
scaffold790	subtractBed	intrn	154580	154616	.	+	.	Parent=CGI_10013168;
	scaffold790	TRF	Tandem_Repeat	154580	154616	56	+	.	.
scaffold790	subtractBed	intrn	158965	159252	.	+	.	Parent=CGI_10013169;
	scaffold790	TRF	Tandem_Repeat	158965	159252	354	+	.	.
scaffold790	subtractBed	intrn	173679	173755	.	+	.	Parent=CGI_10013169;
	scaffold790	TRF	Tandem_Repeat	173679	173755	109	+	.	.
scaffold790	subtractBed	intrn	173753	173827	.	+	.	Parent=CGI_10013169;
	scaffold790	TRF	Tandem_Repeat	173753	173827	150	+	.	.
scaffold790	subtractBed	intrn	176268	176566	.	+	.	Parent=CGI_10013169;
	scaffold790	TRF	Tandem_Repeat	176268	176566	287	+	.	.
scaffold790	subtractBed	intrn	176268	176566	.	+	.	Parent=CGI_10013169;
	scaffold790	TRF	Tandem_Repeat	176268	176566	341	+	.	.
scaffold790	subtractBed	intrn	240851	241231	.	+	.	Parent=CGI_10013172;
	scaffold790	WUBlastX	LINE_L2	240851	241231	72	-	.	.
scaffold790	subtractBed	intrn	240671	241042	.	+	.	Parent=CGI_10013172;
	scaffold790	WUBlastX	LINE_L2	240671	241042	130	-	.	.
scaffold790	subtractBed	intrn	240489	240740	.	+	.	Parent=CGI_10013172;
	scaffold790	WUBlastX	LINE_L2	240489	240740	50	-	.	.
scaffold790	subtractBed	intrn	240836	241060	.	+	.	Parent=CGI_10013172;
	scaffold790	WUBlastX	LINE_CR1-L2	240836	241060	197	-	.	.
scaffold790	subtractBed	intrn	240758	241090	.	+	.	Parent=CGI_10013172;
	scaffold790	WUBlastX	LINE_CR1-L2	240758	241090	178	-	.	.
scaffold790	subtractBed	intrn	248192	248234	.	+	.	Parent=CGI_10013172;
	scaffold790	TRF	Tandem_Repeat	248192	248234	86	+	.	.
scaffold790	subtractBed	intrn	268349	268423	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	268349	268423	141	+	.	.
scaffold790	subtractBed	intrn	270573	271017	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	270573	271017	746	+	.	.
scaffold790	subtractBed	intrn	270573	271183	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	270573	271183	817	+	.	.
scaffold790	subtractBed	intrn	270573	271183	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	270573	271183	799	+	.	.
scaffold790	subtractBed	intrn	270995	271573	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	270995	271573	678	+	.	.
scaffold790	subtractBed	intrn	277782	277850	.	+	.	Parent=CGI_10013175;
	scaffold790	TRF	Tandem_Repeat	277782	277850	138	+	.	.
scaffold790	subtractBed	intrn	289446	290441	.	-	.	Parent=CGI_10013176;
	scaffold790	TRF	Tandem_Repeat	289446	290452	1362	+	.	.
scaffold790	subtractBed	intrn	293072	293140	.	-	.	Parent=CGI_10013176;
	scaffold790	TRF	Tandem_Repeat	293072	293140	75	+	.	.
scaffold790	subtractBed	intrn	295566	295824	.	-	.	Parent=CGI_10013176;
	scaffold790	TRF	Tandem_Repeat	295566	295824	394	+	.	.
scaffold790	subtractBed	intrn	294196	295547	.	-	.	Parent=CGI_10013176;
	scaffold790	TRF	Tandem_Repeat	294196	295547	2013	+	.	.
scaffold793	subtractBed	intrn	4444	4477	.	-	.	Parent=CGI_10010887;
	scaffold793	TRF	Tandem_Repeat	4444	4477	61	+	.	.
scaffold793	subtractBed	intrn	19968	20106	.	-	.	Parent=CGI_10010889;
	scaffold793	TRF	Tandem_Repeat	19968	20106	219	+	.	.
scaffold793	subtractBed	intrn	62038	62319	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_hAT-Blackja	62038	62319	50	-	.	.
scaffold793	subtractBed	intrn	62970	63155	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_NOF	62970	63155	89	+	.	.
scaffold793	subtractBed	intrn	63663	63770	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_NOF	63663	63770	58	+	.	.
scaffold793	subtractBed	intrn	63663	63794	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_MuDR	63663	63794	53	+	.	.
scaffold793	subtractBed	intrn	67491	67610	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_NOF	67491	67610	31	+	.	.
scaffold793	subtractBed	intrn	67557	67619	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	DNA_NOF	67557	67619	32	+	.	.
scaffold793	subtractBed	intrn	71568	71693	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	LINE_Penelope	71568	71693	51	+	.	.
scaffold793	subtractBed	intrn	71678	71953	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	LINE_Penelope	71678	71953	42	+	.	.
scaffold793	subtractBed	intrn	71962	72099	.	+	.	Parent=CGI_10010892;
	scaffold793	WUBlastX	LINE_Penelope	71962	72099	45	+	.	.
scaffold793	subtractBed	intrn	190156	191334	.	+	.	Parent=CGI_10010897;
	scaffold793	TRF	Tandem_Repeat	190156	191334	1290	+	.	.
scaffold793	subtractBed	intrn	195503	195649	.	+	.	Parent=CGI_10010897;
	scaffold793	TRF	Tandem_Repeat	195503	195649	258	+	.	.
scaffold793	subtractBed	intrn	210026	210051	.	+	.	Parent=CGI_10010898;
	scaffold793	TRF	Tandem_Repeat	210026	210051	52	+	.	.
scaffold793	subtractBed	intrn	221210	221374	.	+	.	Parent=CGI_10010899;
	scaffold793	TRF	Tandem_Repeat	221210	221374	210	+	.	.
scaffold793	subtractBed	intrn	221300	221422	.	+	.	Parent=CGI_10010899;
	scaffold793	TRF	Tandem_Repeat	221300	221422	219	+	.	.
scaffold793	subtractBed	intrn	236684	236735	.	+	.	Parent=CGI_10010900;
	scaffold793	TRF	Tandem_Repeat	236684	236735	104	+	.	.
scaffold793	subtractBed	intrn	266373	266418	.	+	.	Parent=CGI_10010902;
	scaffold793	TRF	Tandem_Repeat	266373	266418	85	+	.	.
scaffold793	subtractBed	intrn	273761	273790	.	+	.	Parent=CGI_10010902;
	scaffold793	TRF	Tandem_Repeat	273761	273790	60	+	.	.
scaffold794	subtractBed	intrn	36893	37609	.	-	.	Parent=CGI_10017134;
	scaffold794	WUBlastX	DNA_Crypton	36893	37609	177	-	.	.
scaffold794	subtractBed	intrn	68418	68460	.	+	.	Parent=CGI_10017136;
	scaffold794	TRF	Tandem_Repeat	68418	68460	52	+	.	.
scaffold794	subtractBed	intrn	68403	68452	.	+	.	Parent=CGI_10017136;
	scaffold794	TRF	Tandem_Repeat	68403	68452	73	+	.	.
scaffold794	subtractBed	intrn	71897	71939	.	+	.	Parent=CGI_10017136;
	scaffold794	TRF	Tandem_Repeat	71897	71939	86	+	.	.
scaffold794	subtractBed	intrn	74429	74454	.	+	.	Parent=CGI_10017136;
	scaffold794	TRF	Tandem_Repeat	74429	74454	52	+	.	.
scaffold794	subtractBed	intrn	75178	75546	.	+	.	Parent=CGI_10017136;
	scaffold794	WUBlastX	LINE_Penelope	75178	75546	24	+	.	.
scaffold794	subtractBed	intrn	75112	75468	.	+	.	Parent=CGI_10017136;
	scaffold794	WUBlastX	LINE_Penelope	75112	75468	55	+	.	.
scaffold794	subtractBed	intrn	109314	109480	.	-	.	Parent=CGI_10017140;
	scaffold794	TRF	Tandem_Repeat	109314	109480	128	+	.	.
scaffold794	subtractBed	intrn	113071	113108	.	-	.	Parent=CGI_10017140;
	scaffold794	TRF	Tandem_Repeat	113071	113108	76	+	.	.
scaffold794	subtractBed	intrn	113951	114319	.	-	.	Parent=CGI_10017140;
	scaffold794	TRF	Tandem_Repeat	113951	114319	412	+	.	.
scaffold794	subtractBed	intrn	113951	114319	.	-	.	Parent=CGI_10017140;
	scaffold794	TRF	Tandem_Repeat	113951	114319	430	+	.	.
scaffold794	subtractBed	intrn	120320	121144	.	-	.	Parent=CGI_10017141;
	scaffold794	TRF	Tandem_Repeat	120320	121151	1121	+	.	.
scaffold794	subtractBed	intrn	123667	123820	.	-	.	Parent=CGI_10017141;
	scaffold794	TRF	Tandem_Repeat	123667	123820	238	+	.	.
scaffold794	subtractBed	intrn	126646	127087	.	-	.	Parent=CGI_10017141;
	scaffold794	TRF	Tandem_Repeat	126646	127087	647	+	.	.
scaffold794	subtractBed	intrn	128002	128045	.	-	.	Parent=CGI_10017141;
	scaffold794	TRF	Tandem_Repeat	128002	128045	72	+	.	.
scaffold794	subtractBed	intrn	128183	129239	.	-	.	Parent=CGI_10017141;
	scaffold794	TRF	Tandem_Repeat	128183	129239	1609	+	.	.
scaffold794	subtractBed	intrn	133632	133903	.	+	.	Parent=CGI_10017142;
	scaffold794	TRF	Tandem_Repeat	133592	133903	588	+	.	.
scaffold794	subtractBed	intrn	134507	134608	.	+	.	Parent=CGI_10017142;
	scaffold794	TRF	Tandem_Repeat	134507	134608	195	+	.	.
scaffold794	subtractBed	intrn	142441	142483	.	+	.	Parent=CGI_10017142;
	scaffold794	TRF	Tandem_Repeat	142441	142483	86	+	.	.
scaffold794	subtractBed	intrn	146525	146565	.	+	.	Parent=CGI_10017142;
	scaffold794	TRF	Tandem_Repeat	146525	146565	82	+	.	.
scaffold794	subtractBed	intrn	170631	171617	.	+	.	Parent=CGI_10017146;
	scaffold794	TRF	Tandem_Repeat	170631	171617	1250	+	.	.
scaffold794	subtractBed	intrn	174580	174813	.	+	.	Parent=CGI_10017146;
	scaffold794	TRF	Tandem_Repeat	174580	174813	468	+	.	.
scaffold794	subtractBed	intrn	208076	209243	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	208037	209243	1957	+	.	.
scaffold794	subtractBed	intrn	209621	210462	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	209603	210462	1414	+	.	.
scaffold794	subtractBed	intrn	209621	210462	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	209603	210462	1432	+	.	.
scaffold794	subtractBed	intrn	210459	211098	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	210459	211098	1074	+	.	.
scaffold794	subtractBed	intrn	210459	211098	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	210459	211098	774	+	.	.
scaffold794	subtractBed	intrn	213838	214058	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	213838	214058	210	+	.	.
scaffold794	subtractBed	intrn	213859	214160	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	213859	214160	331	+	.	.
scaffold794	subtractBed	intrn	214106	214161	.	+	.	Parent=CGI_10017148;
	scaffold794	TRF	Tandem_Repeat	214106	214161	52	+	.	.
scaffold794	subtractBed	intrn	227030	227068	.	-	.	Parent=CGI_10017149;
	scaffold794	TRF	Tandem_Repeat	227030	227068	78	+	.	.
scaffold794	subtractBed	intrn	231843	231890	.	-	.	Parent=CGI_10017149;
	scaffold794	TRF	Tandem_Repeat	231843	231890	53	+	.	.
scaffold794	subtractBed	intrn	232955	233122	.	-	.	Parent=CGI_10017149;
	scaffold794	TRF	Tandem_Repeat	232955	233122	309	+	.	.
scaffold794	subtractBed	intrn	236003	236537	.	-	.	Parent=CGI_10017149;
	scaffold794	TRF	Tandem_Repeat	236003	236537	755	+	.	.
scaffold794	subtractBed	intrn	252673	252994	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	252673	252994	526	+	.	.
scaffold794	subtractBed	intrn	252673	252994	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	252673	252994	581	+	.	.
scaffold794	subtractBed	intrn	252673	252994	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	252673	252994	562	+	.	.
scaffold794	subtractBed	intrn	253197	253843	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	253197	253843	1057	+	.	.
scaffold794	subtractBed	intrn	254246	254755	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	254246	254755	759	+	.	.
scaffold794	subtractBed	intrn	258921	259832	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	258921	259832	1426	+	.	.
scaffold794	subtractBed	intrn	261139	261379	.	+	.	Parent=CGI_10017152;
	scaffold794	TRF	Tandem_Repeat	261139	261379	428	+	.	.
scaffold794	subtractBed	intrn	262434	262511	.	+	.	Parent=CGI_10017152;
	scaffold794	WUBlastX	DNA_Harbinger	262434	262511	50	+	.	.
scaffold794	subtractBed	intrn	263194	263304	.	+	.	Parent=CGI_10017152;
	scaffold794	WUBlastX	DNA_Harbinger	263194	263304	37	+	.	.
scaffold794	subtractBed	intrn	263259	263363	.	+	.	Parent=CGI_10017152;
	scaffold794	WUBlastX	DNA_Harbinger	263259	263363	30	+	.	.
scaffold794	subtractBed	intrn	271651	271869	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	271651	271869	86	-	.	.
scaffold794	subtractBed	intrn	281467	281667	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281467	281667	26	+	.	.
scaffold794	subtractBed	intrn	281424	281468	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281424	281468	22	+	.	.
scaffold794	subtractBed	intrn	281604	282245	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281604	282245	122	+	.	.
scaffold794	subtractBed	intrn	281021	281218	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281021	281218	168	+	.	.
scaffold794	subtractBed	intrn	281601	282110	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281601	282110	280	+	.	.
scaffold794	subtractBed	intrn	280988	281248	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	280988	281248	80	+	.	.
scaffold794	subtractBed	intrn	281499	282110	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	281499	282110	83	+	.	.
scaffold794	subtractBed	intrn	280858	281007	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy-Cigr	280858	281007	116	+	.	.
scaffold794	subtractBed	intrn	282134	282292	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy-Cigr	282134	282292	33	+	.	.
scaffold794	subtractBed	intrn	280819	281007	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	280819	281007	44	+	.	.
scaffold794	subtractBed	intrn	280600	280662	.	-	.	Parent=CGI_10017153;
	scaffold794	WUBlastX	LTR_Gypsy	280600	280662	23	+	.	.
scaffold794	subtractBed	intrn	309536	310363	.	-	.	Parent=CGI_10017155;
	scaffold794	TRF	Tandem_Repeat	309536	310363	1052	+	.	.
scaffold794	subtractBed	intrn	316954	317166	.	-	.	Parent=CGI_10017155;
	scaffold794	TRF	Tandem_Repeat	316954	317166	96	+	.	.
scaffold794	subtractBed	intrn	317059	317174	.	-	.	Parent=CGI_10017155;
	scaffold794	TRF	Tandem_Repeat	317059	317174	89	+	.	.
scaffold794	subtractBed	intrn	316954	317165	.	-	.	Parent=CGI_10017155;
	scaffold794	TRF	Tandem_Repeat	316954	317165	162	+	.	.
scaffold794	subtractBed	intrn	317235	318629	.	-	.	Parent=CGI_10017155;
	scaffold794	WUBlastX	LINE_L1-Tx1	317235	318629	449	-	.	.
scaffold794	subtractBed	intrn	318141	318902	.	-	.	Parent=CGI_10017155;
	scaffold794	WUBlastX	LINE_RTE-BovB	318141	318902	66	-	.	.
scaffold794	subtractBed	intrn	324724	324778	.	-	.	Parent=CGI_10017156;
	scaffold794	TRF	Tandem_Repeat	324724	324778	58	+	.	.
scaffold794	subtractBed	intrn	381871	381946	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	381871	381946	134	+	.	.
scaffold794	subtractBed	intrn	383156	383200	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	383156	383200	90	+	.	.
scaffold794	subtractBed	intrn	383616	383662	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	383616	383662	94	+	.	.
scaffold794	subtractBed	intrn	396977	397045	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	396977	397045	122	+	.	.
scaffold794	subtractBed	intrn	400046	400101	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	400046	400101	112	+	.	.
scaffold794	subtractBed	intrn	393780	394775	.	-	.	Parent=CGI_10017158;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	393780	394775	340	-	.	.
scaffold794	subtractBed	intrn	394813	395082	.	-	.	Parent=CGI_10017158;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	394813	395082	56	-	.	.
scaffold794	subtractBed	intrn	394816	394971	.	-	.	Parent=CGI_10017158;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	394816	394971	75	-	.	.
scaffold794	subtractBed	intrn	394801	394872	.	-	.	Parent=CGI_10017158;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	394801	394872	36	-	.	.
scaffold794	subtractBed	intrn	393426	394751	.	-	.	Parent=CGI_10017158;
	scaffold794	WUBlastX	DNA_TcMar-Fot1	393426	394751	327	-	.	.
scaffold794	subtractBed	intrn	417811	417850	.	-	.	Parent=CGI_10017158;
	scaffold794	TRF	Tandem_Repeat	417811	417850	53	+	.	.
scaffold794	subtractBed	intrn	471601	471941	.	-	.	Parent=CGI_10017160;
	scaffold794	TRF	Tandem_Repeat	471601	471950	500	+	.	.
scaffold794	subtractBed	intrn	471601	471941	.	-	.	Parent=CGI_10017160;
	scaffold794	TRF	Tandem_Repeat	471601	471950	538	+	.	.
scaffold794	subtractBed	intrn	474120	474156	.	-	.	Parent=CGI_10017160;
	scaffold794	TRF	Tandem_Repeat	474120	474156	74	+	.	.
scaffold796	subtractBed	intrn	78120	78163	.	-	.	Parent=CGI_10003633;
	scaffold796	TRF	Tandem_Repeat	78120	78163	88	+	.	.
scaffold801	subtractBed	intrn	65466	65639	.	+	.	Parent=CGI_10024060;
	scaffold801	TRF	Tandem_Repeat	65466	65639	289	+	.	.
scaffold801	subtractBed	intrn	70774	70800	.	-	.	Parent=CGI_10024061;
	scaffold801	TRF	Tandem_Repeat	70774	70800	54	+	.	.
scaffold801	subtractBed	intrn	75056	75304	.	-	.	Parent=CGI_10024061;
	scaffold801	TRF	Tandem_Repeat	75056	75320	165	+	.	.
scaffold801	subtractBed	intrn	80805	80879	.	-	.	Parent=CGI_10024062;
	scaffold801	TRF	Tandem_Repeat	80805	80879	150	+	.	.
scaffold801	subtractBed	intrn	84094	84137	.	-	.	Parent=CGI_10024062;
	scaffold801	TRF	Tandem_Repeat	84094	84137	88	+	.	.
scaffold801	subtractBed	intrn	84094	84137	.	+	.	Parent=CGI_10024063;
	scaffold801	TRF	Tandem_Repeat	84094	84137	88	+	.	.
scaffold801	subtractBed	intrn	85642	85729	.	+	.	Parent=CGI_10024063;
	scaffold801	TRF	Tandem_Repeat	85642	85729	99	+	.	.
scaffold801	subtractBed	intrn	87356	87386	.	+	.	Parent=CGI_10024063;
	scaffold801	WUBlastX	DNA_hAT	87356	87670	73	+	.	.
scaffold801	subtractBed	intrn	100723	101522	.	+	.	Parent=CGI_10024064;
	scaffold801	TRF	Tandem_Repeat	100723	101522	1124	+	.	.
scaffold801	subtractBed	intrn	103021	103051	.	+	.	Parent=CGI_10024064;
	scaffold801	WUBlastX	DNA_hAT	103021	103335	77	+	.	.
scaffold801	subtractBed	intrn	109206	109261	.	-	.	Parent=CGI_10024065;
	scaffold801	TRF	Tandem_Repeat	109206	109261	112	+	.	.
scaffold801	subtractBed	intrn	116118	116254	.	+	.	Parent=CGI_10024066;
	scaffold801	TRF	Tandem_Repeat	116118	116254	184	+	.	.
scaffold801	subtractBed	intrn	116357	116430	.	+	.	Parent=CGI_10024066;
	scaffold801	TRF	Tandem_Repeat	116357	116430	148	+	.	.
scaffold801	subtractBed	intrn	185005	185043	.	+	.	Parent=CGI_10024076;
	scaffold801	TRF	Tandem_Repeat	185005	185043	69	+	.	.
scaffold801	subtractBed	intrn	216742	217040	.	+	.	Parent=CGI_10024078;
	scaffold801	TRF	Tandem_Repeat	216742	217040	508	+	.	.
scaffold801	subtractBed	intrn	238834	238933	.	-	.	Parent=CGI_10024080;
	scaffold801	TRF	Tandem_Repeat	238834	238933	100	+	.	.
scaffold801	subtractBed	intrn	241042	241114	.	-	.	Parent=CGI_10024080;
	scaffold801	TRF	Tandem_Repeat	241042	241114	119	+	.	.
scaffold801	subtractBed	intrn	245022	245269	.	-	.	Parent=CGI_10024080;
	scaffold801	TRF	Tandem_Repeat	245022	245269	202	+	.	.
scaffold801	subtractBed	intrn	267953	267986	.	-	.	Parent=CGI_10024082;
	scaffold801	TRF	Tandem_Repeat	267953	267986	68	+	.	.
scaffold801	subtractBed	intrn	273856	274179	.	-	.	Parent=CGI_10024082;
	scaffold801	WUBlastX	LINE_RTE-X	273856	274179	53	-	.	.
scaffold801	subtractBed	intrn	273713	273856	.	-	.	Parent=CGI_10024082;
	scaffold801	WUBlastX	LINE_RTE-X	273713	273856	36	-	.	.
scaffold801	subtractBed	intrn	274170	274622	.	-	.	Parent=CGI_10024082;
	scaffold801	WUBlastX	LINE_RTE-X	274170	274622	262	-	.	.
scaffold801	subtractBed	intrn	273752	273856	.	-	.	Parent=CGI_10024082;
	scaffold801	WUBlastX	LINE_RTE-X	273752	273856	49	-	.	.
scaffold801	subtractBed	intrn	327541	327940	.	-	.	Parent=CGI_10024085;
	scaffold801	TRF	Tandem_Repeat	327541	327940	586	+	.	.
scaffold801	subtractBed	intrn	388073	388132	.	-	.	Parent=CGI_10024088;
	scaffold801	TRF	Tandem_Repeat	388073	388132	120	+	.	.
scaffold801	subtractBed	intrn	633081	633446	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	DNA_TcMar-Tc1	633081	633446	133	+	.	.
scaffold801	subtractBed	intrn	638252	638563	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	LINE_RTE-X	638252	638563	82	+	.	.
scaffold801	subtractBed	intrn	633141	633446	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	DNA_TcMar-Tc1	633141	633446	164	+	.	.
scaffold801	subtractBed	intrn	638252	638470	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	LINE_RTE-X	638252	638470	98	+	.	.
scaffold801	subtractBed	intrn	638252	638422	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	LINE_RTE-X	638252	638422	99	+	.	.
scaffold801	subtractBed	intrn	633027	633287	.	-	.	Parent=CGI_10024093;
	scaffold801	WUBlastX	DNA_TcMar-Marin	633027	633287	31	+	.	.
scaffold801	subtractBed	intrn	683749	683796	.	+	.	Parent=CGI_10024095;
	scaffold801	TRF	Tandem_Repeat	683749	683796	53	+	.	.
scaffold801	subtractBed	intrn	749221	749737	.	+	.	Parent=CGI_10024098;
	scaffold801	TRF	Tandem_Repeat	749221	749737	872	+	.	.
scaffold801	subtractBed	intrn	890963	890996	.	+	.	Parent=CGI_10024100;
	scaffold801	TRF	Tandem_Repeat	890963	890996	59	+	.	.
scaffold802	subtractBed	intrn	6484	6484	.	-	.	Parent=CGI_10015724;
	scaffold802	WUBlastX	DNA_Sola	6484	6651	66	-	.	.
scaffold802	subtractBed	intrn	140623	140663	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	140623	140663	82	+	.	.
scaffold802	subtractBed	intrn	141836	141873	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	141836	141873	69	+	.	.
scaffold802	subtractBed	intrn	141234	141470	.	-	.	Parent=CGI_10015727;
	scaffold802	WUBlastX	LINE_L1-Tx1	141234	141470	116	+	.	.
scaffold802	subtractBed	intrn	141020	141229	.	-	.	Parent=CGI_10015727;
	scaffold802	WUBlastX	LINE_L1-Tx1	141020	141229	37	+	.	.
scaffold802	subtractBed	intrn	141128	141259	.	-	.	Parent=CGI_10015727;
	scaffold802	WUBlastX	LINE_L1	141128	141259	42	+	.	.
scaffold802	subtractBed	intrn	141216	141674	.	-	.	Parent=CGI_10015727;
	scaffold802	WUBlastX	LINE_L1-Tx1	141216	141674	81	+	.	.
scaffold802	subtractBed	intrn	141255	141602	.	-	.	Parent=CGI_10015727;
	scaffold802	WUBlastX	LINE_L1-Tx1	141255	141602	92	+	.	.
scaffold802	subtractBed	intrn	153706	153772	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	153706	153772	80	+	.	.
scaffold802	subtractBed	intrn	169578	169626	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	169578	169626	98	+	.	.
scaffold802	subtractBed	intrn	190613	190655	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	190613	190655	59	+	.	.
scaffold802	subtractBed	intrn	191905	191958	.	-	.	Parent=CGI_10015727;
	scaffold802	TRF	Tandem_Repeat	191905	191958	54	+	.	.
scaffold802	subtractBed	intrn	209340	209383	.	-	.	Parent=CGI_10015728;
	scaffold802	TRF	Tandem_Repeat	209340	209383	52	+	.	.
scaffold802	subtractBed	intrn	209795	209834	.	-	.	Parent=CGI_10015728;
	scaffold802	TRF	Tandem_Repeat	209795	209834	53	+	.	.
scaffold802	subtractBed	intrn	291877	291963	.	-	.	Parent=CGI_10015729;
	scaffold802	TRF	Tandem_Repeat	291877	291963	126	+	.	.
scaffold802	subtractBed	intrn	306438	306473	.	-	.	Parent=CGI_10015729;
	scaffold802	TRF	Tandem_Repeat	306438	306473	63	+	.	.
scaffold802	subtractBed	intrn	315105	315157	.	+	.	Parent=CGI_10015731;
	scaffold802	TRF	Tandem_Repeat	315105	315157	106	+	.	.
scaffold802	subtractBed	intrn	319098	319127	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	319098	319127	51	+	.	.
scaffold802	subtractBed	intrn	319748	319772	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	319748	319772	50	+	.	.
scaffold802	subtractBed	intrn	319866	319896	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	319866	319896	53	+	.	.
scaffold802	subtractBed	intrn	319929	320345	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	319929	320345	521	+	.	.
scaffold802	subtractBed	intrn	320661	320769	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	320661	320769	69	+	.	.
scaffold802	subtractBed	intrn	320973	321055	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	320973	321055	87	+	.	.
scaffold802	subtractBed	intrn	320973	321093	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	320973	321093	127	+	.	.
scaffold802	subtractBed	intrn	320973	321085	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	320973	321085	86	+	.	.
scaffold802	subtractBed	intrn	352700	352729	.	+	.	Parent=CGI_10015732;
	scaffold802	TRF	Tandem_Repeat	352700	352729	60	+	.	.
scaffold802	subtractBed	intrn	364322	364607	.	-	.	Parent=CGI_10015734;
	scaffold802	TRF	Tandem_Repeat	364322	364607	428	+	.	.
scaffold802	subtractBed	intrn	364325	364593	.	-	.	Parent=CGI_10015734;
	scaffold802	TRF	Tandem_Repeat	364325	364593	313	+	.	.
scaffold802	subtractBed	intrn	364620	364807	.	-	.	Parent=CGI_10015734;
	scaffold802	TRF	Tandem_Repeat	364620	364807	223	+	.	.
scaffold802	subtractBed	intrn	364620	364809	.	-	.	Parent=CGI_10015734;
	scaffold802	TRF	Tandem_Repeat	364620	364809	143	+	.	.
scaffold802	subtractBed	intrn	364894	364980	.	-	.	Parent=CGI_10015734;
	scaffold802	TRF	Tandem_Repeat	364894	364980	113	+	.	.
scaffold802	subtractBed	intrn	427734	427782	.	-	.	Parent=CGI_10015736;
	scaffold802	TRF	Tandem_Repeat	427734	427782	98	+	.	.
scaffold804	subtractBed	intrn	162168	162440	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	DNA_IS4EU	162168	162440	76	+	.	.
scaffold804	subtractBed	intrn	162078	162572	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	DNA_IS4EU	162078	162572	32	+	.	.
scaffold804	subtractBed	intrn	164439	164503	.	-	.	Parent=CGI_10014856;
	scaffold804	TRF	Tandem_Repeat	164439	164503	85	+	.	.
scaffold804	subtractBed	intrn	164444	164502	.	-	.	Parent=CGI_10014856;
	scaffold804	TRF	Tandem_Repeat	164444	164502	82	+	.	.
scaffold804	subtractBed	intrn	164448	164503	.	-	.	Parent=CGI_10014856;
	scaffold804	TRF	Tandem_Repeat	164448	164503	67	+	.	.
scaffold804	subtractBed	intrn	166894	167334	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	166894	167334	348	-	.	.
scaffold804	subtractBed	intrn	167367	167933	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	167367	167933	296	-	.	.
scaffold804	subtractBed	intrn	167352	167408	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	167352	167408	23	-	.	.
scaffold804	subtractBed	intrn	169414	170139	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	169414	170139	90	-	.	.
scaffold804	subtractBed	intrn	167932	169701	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	167932	169701	756	-	.	.
scaffold804	subtractBed	intrn	170037	170303	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy-Cigr	170037	170303	68	-	.	.
scaffold804	subtractBed	intrn	169285	169914	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	169285	169914	158	-	.	.
scaffold804	subtractBed	intrn	166121	166156	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy	166121	166156	28	-	.	.
scaffold804	subtractBed	intrn	167923	169386	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy-Cigr	167923	169386	811	-	.	.
scaffold804	subtractBed	intrn	166230	166892	.	-	.	Parent=CGI_10014856;
	scaffold804	WUBlastX	LTR_Gypsy-Cigr	166230	166892	298	-	.	.
scaffold804	subtractBed	intrn	173420	173465	.	+	.	Parent=CGI_10014858;
	scaffold804	TRF	Tandem_Repeat	173420	173465	92	+	.	.
scaffold804	subtractBed	intrn	178391	178666	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	178391	178666	43	-	.	.
scaffold804	subtractBed	intrn	178693	178851	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	178693	178851	54	-	.	.
scaffold804	subtractBed	intrn	178891	178998	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	178891	178998	24	-	.	.
scaffold804	subtractBed	intrn	178849	178965	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	178849	178965	33	-	.	.
scaffold804	subtractBed	intrn	179003	180130	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	179003	180130	373	-	.	.
scaffold804	subtractBed	intrn	179544	180275	.	+	.	Parent=CGI_10014858;
	scaffold804	WUBlastX	LTR_Gypsy	179544	180275	115	-	.	.
scaffold804	subtractBed	intrn	272807	272844	.	-	.	Parent=CGI_10014862;
	scaffold804	TRF	Tandem_Repeat	272807	272844	58	+	.	.
scaffold804	subtractBed	intrn	385775	385831	.	-	.	Parent=CGI_10014864;
	scaffold804	TRF	Tandem_Repeat	385775	385831	114	+	.	.
scaffold806	subtractBed	intrn	14191	14757	.	+	.	Parent=CGI_10004919;
	scaffold806	WUBlastX	LTR_DIRS	14191	14757	112	+	.	.
scaffold806	subtractBed	intrn	14221	14901	.	+	.	Parent=CGI_10004919;
	scaffold806	WUBlastX	LTR_DIRS	14221	14901	86	+	.	.
scaffold806	subtractBed	intrn	15035	15451	.	+	.	Parent=CGI_10004919;
	scaffold806	WUBlastX	LTR_DIRS	15035	15451	63	+	.	.
scaffold806	subtractBed	intrn	53767	53802	.	+	.	Parent=CGI_10004921;
	scaffold806	TRF	Tandem_Repeat	53767	53802	72	+	.	.
scaffold806	subtractBed	intrn	53880	53913	.	+	.	Parent=CGI_10004921;
	scaffold806	TRF	Tandem_Repeat	53880	53913	68	+	.	.
scaffold806	subtractBed	intrn	55391	55456	.	+	.	Parent=CGI_10004921;
	scaffold806	TRF	Tandem_Repeat	55391	55456	123	+	.	.
scaffold806	subtractBed	intrn	74344	74398	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	74344	74398	110	+	.	.
scaffold806	subtractBed	intrn	78428	78494	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	78428	78494	116	+	.	.
scaffold806	subtractBed	intrn	80016	81064	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	80016	81064	1035	+	.	.
scaffold806	subtractBed	intrn	80022	81064	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	80022	81064	850	+	.	.
scaffold806	subtractBed	intrn	80022	81064	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	80022	81064	1160	+	.	.
scaffold806	subtractBed	intrn	80017	81064	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	80017	81064	926	+	.	.
scaffold806	subtractBed	intrn	82018	82115	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	82018	82115	178	+	.	.
scaffold806	subtractBed	intrn	84683	85718	.	+	.	Parent=CGI_10004923;
	scaffold806	TRF	Tandem_Repeat	84683	85718	1365	+	.	.
scaffold806	subtractBed	intrn	107637	107768	.	+	.	Parent=CGI_10004925;
	scaffold806	TRF	Tandem_Repeat	107637	107768	130	+	.	.
scaffold806	subtractBed	intrn	109726	109952	.	+	.	Parent=CGI_10004925;
	scaffold806	TRF	Tandem_Repeat	109695	109952	457	+	.	.
scaffold806	subtractBed	intrn	112351	112975	.	+	.	Parent=CGI_10004925;
	scaffold806	TRF	Tandem_Repeat	112351	112975	685	+	.	.
scaffold807	subtractBed	intrn	100023	101388	.	-	.	Parent=CGI_10011456;
	scaffold807	TRF	Tandem_Repeat	100023	101388	1768	+	.	.
scaffold807	subtractBed	intrn	100023	101388	.	-	.	Parent=CGI_10011456;
	scaffold807	TRF	Tandem_Repeat	100023	101388	1765	+	.	.
scaffold807	subtractBed	intrn	107704	107946	.	-	.	Parent=CGI_10011456;
	scaffold807	WUBlastX	DNA_hAT	107704	107946	76	+	.	.
scaffold807	subtractBed	intrn	120499	120568	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	120499	120568	53	+	.	.
scaffold807	subtractBed	intrn	122913	122960	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	122913	122960	64	+	.	.
scaffold807	subtractBed	intrn	128215	128280	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	128215	128280	89	+	.	.
scaffold807	subtractBed	intrn	146475	146504	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	146475	146504	51	+	.	.
scaffold807	subtractBed	intrn	147095	147153	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	147095	147153	75	+	.	.
scaffold807	subtractBed	intrn	147095	147153	.	-	.	Parent=CGI_10011457;
	scaffold807	TRF	Tandem_Repeat	147095	147153	75	+	.	.
scaffold807	subtractBed	intrn	164866	164914	.	+	.	Parent=CGI_10011458;
	scaffold807	WUBlastX	LTR_DIRS	164720	164914	68	+	.	.
scaffold807	subtractBed	intrn	169216	169263	.	+	.	Parent=CGI_10011458;
	scaffold807	TRF	Tandem_Repeat	169216	169263	96	+	.	.
scaffold807	subtractBed	intrn	173133	173162	.	+	.	Parent=CGI_10011458;
	scaffold807	TRF	Tandem_Repeat	173133	173162	60	+	.	.
scaffold808	subtractBed	intrn	8872	9002	.	+	.	Parent=CGI_10019010;
	scaffold808	TRF	Tandem_Repeat	8872	9002	181	+	.	.
scaffold808	subtractBed	intrn	69630	69695	.	-	.	Parent=CGI_10019013;
	scaffold808	TRF	Tandem_Repeat	69630	69695	51	+	.	.
scaffold808	subtractBed	intrn	69591	69703	.	-	.	Parent=CGI_10019013;
	scaffold808	TRF	Tandem_Repeat	69591	69703	90	+	.	.
scaffold808	subtractBed	intrn	69587	69683	.	-	.	Parent=CGI_10019013;
	scaffold808	TRF	Tandem_Repeat	69587	69683	139	+	.	.
scaffold808	subtractBed	intrn	89422	90197	.	+	.	Parent=CGI_10019014;
	scaffold808	TRF	Tandem_Repeat	89422	90197	1144	+	.	.
scaffold808	subtractBed	intrn	163695	163721	.	-	.	Parent=CGI_10019018;
	scaffold808	TRF	Tandem_Repeat	163695	163721	54	+	.	.
scaffold808	subtractBed	intrn	170682	171341	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LTR_DIRS	170682	171341	284	+	.	.
scaffold808	subtractBed	intrn	171279	173324	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LTR_DIRS	171279	173324	1263	+	.	.
scaffold808	subtractBed	intrn	183522	183558	.	-	.	Parent=CGI_10019018;
	scaffold808	TRF	Tandem_Repeat	183522	183558	56	+	.	.
scaffold808	subtractBed	intrn	185233	185604	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LINE_L1-Tx1	185233	185604	96	-	.	.
scaffold808	subtractBed	intrn	185609	188149	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LINE_L1-Tx1	185609	188149	1187	-	.	.
scaffold808	subtractBed	intrn	188722	188982	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LINE_L1-Tx1	188722	188982	160	-	.	.
scaffold808	subtractBed	intrn	185603	188719	.	-	.	Parent=CGI_10019018;
	scaffold808	WUBlastX	LINE_L1	185603	188719	1048	-	.	.
scaffold808	subtractBed	intrn	354404	354607	.	+	.	Parent=CGI_10019028;
	scaffold808	TRF	Tandem_Repeat	354404	354607	261	+	.	.
scaffold808	subtractBed	intrn	365924	365977	.	-	.	Parent=CGI_10019029;
	scaffold808	TRF	Tandem_Repeat	365924	365977	57	+	.	.
scaffold808	subtractBed	intrn	380735	380779	.	-	.	Parent=CGI_10019030;
	scaffold808	TRF	Tandem_Repeat	380735	380779	54	+	.	.
scaffold808	subtractBed	intrn	384730	384784	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	384730	384784	110	+	.	.
scaffold808	subtractBed	intrn	390206	390255	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	390206	390255	91	+	.	.
scaffold808	subtractBed	intrn	398766	398811	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	398766	398811	92	+	.	.
scaffold808	subtractBed	intrn	401433	401518	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	401433	401518	172	+	.	.
scaffold808	subtractBed	intrn	409336	409667	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	409336	409667	431	+	.	.
scaffold808	subtractBed	intrn	417586	417650	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	417586	417650	112	+	.	.
scaffold808	subtractBed	intrn	427535	427899	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	427535	427914	349	+	.	.
scaffold808	subtractBed	intrn	427562	427824	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	427562	427824	226	+	.	.
scaffold808	subtractBed	intrn	427655	427775	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	427655	427775	100	+	.	.
scaffold808	subtractBed	intrn	427535	427899	.	+	.	Parent=CGI_10019031;
	scaffold808	TRF	Tandem_Repeat	427535	427914	375	+	.	.
scaffold808	subtractBed	intrn	471947	471995	.	+	.	Parent=CGI_10019032;
	scaffold808	TRF	Tandem_Repeat	471947	471995	98	+	.	.
scaffold808	subtractBed	intrn	481644	481695	.	+	.	Parent=CGI_10019032;
	scaffold808	TRF	Tandem_Repeat	481644	481695	104	+	.	.
scaffold808	subtractBed	intrn	532165	532667	.	-	.	Parent=CGI_10019038;
	scaffold808	TRF	Tandem_Repeat	532165	532667	663	+	.	.
scaffold808	subtractBed	intrn	533598	533826	.	-	.	Parent=CGI_10019038;
	scaffold808	TRF	Tandem_Repeat	533598	533826	449	+	.	.
scaffold808	subtractBed	intrn	548704	548754	.	+	.	Parent=CGI_10019039;
	scaffold808	TRF	Tandem_Repeat	548704	548754	102	+	.	.
scaffold808	subtractBed	intrn	572834	572904	.	-	.	Parent=CGI_10019041;
	scaffold808	TRF	Tandem_Repeat	572834	572904	92	+	.	.
scaffold809	subtractBed	intrn	104078	104104	.	+	.	Parent=CGI_10006490;
	scaffold809	TRF	Tandem_Repeat	104078	104104	54	+	.	.
scaffold809	subtractBed	intrn	111672	111765	.	+	.	Parent=CGI_10006490;
	scaffold809	TRF	Tandem_Repeat	111672	111765	118	+	.	.
scaffold809	subtractBed	intrn	111928	112066	.	+	.	Parent=CGI_10006490;
	scaffold809	TRF	Tandem_Repeat	111928	112066	109	+	.	.
scaffold809	subtractBed	intrn	112143	112234	.	+	.	Parent=CGI_10006490;
	scaffold809	TRF	Tandem_Repeat	112143	112234	150	+	.	.
scaffold809	subtractBed	intrn	106439	107998	.	+	.	Parent=CGI_10006490;
	scaffold809	WUBlastX	LTR_Ngaro	106439	107998	1103	+	.	.
scaffold809	subtractBed	intrn	105673	106461	.	+	.	Parent=CGI_10006490;
	scaffold809	WUBlastX	LTR_Ngaro	105673	106461	198	+	.	.
scaffold809	subtractBed	intrn	105379	106455	.	+	.	Parent=CGI_10006490;
	scaffold809	WUBlastX	LTR_Ngaro	105379	106455	183	+	.	.
scaffold809	subtractBed	intrn	107974	108255	.	+	.	Parent=CGI_10006490;
	scaffold809	WUBlastX	LTR_Ngaro	107974	108255	85	+	.	.
scaffold809	subtractBed	intrn	121558	121674	.	+	.	Parent=CGI_10006493;
	scaffold809	WUBlastX	LTR_Gypsy	121558	121674	66	+	.	.
scaffold809	subtractBed	intrn	128277	128359	.	+	.	Parent=CGI_10006493;
	scaffold809	TRF	Tandem_Repeat	128277	128359	166	+	.	.
scaffold809	subtractBed	intrn	139266	139330	.	+	.	Parent=CGI_10006495;
	scaffold809	TRF	Tandem_Repeat	139266	139330	85	+	.	.
scaffold809	subtractBed	intrn	140752	140789	.	+	.	Parent=CGI_10006495;
	scaffold809	TRF	Tandem_Repeat	140752	140789	76	+	.	.
scaffold809	subtractBed	intrn	141064	141114	.	+	.	Parent=CGI_10006495;
	scaffold809	TRF	Tandem_Repeat	141064	141114	57	+	.	.
scaffold809	subtractBed	intrn	143941	143969	.	+	.	Parent=CGI_10006495;
	scaffold809	TRF	Tandem_Repeat	143941	143969	51	+	.	.
scaffold810	subtractBed	intrn	99695	99750	.	+	.	Parent=CGI_10005277;
	scaffold810	TRF	Tandem_Repeat	99695	99750	112	+	.	.
scaffold812	subtractBed	intrn	11017	11105	.	+	.	Parent=CGI_10002494;
	scaffold812	TRF	Tandem_Repeat	11017	11105	88	+	.	.
scaffold812	subtractBed	intrn	29918	30134	.	+	.	Parent=CGI_10002496;
	scaffold812	TRF	Tandem_Repeat	29918	30134	179	+	.	.
scaffold814	subtractBed	intrn	30326	30431	.	+	.	Parent=CGI_10008192;
	scaffold814	TRF	Tandem_Repeat	30326	30431	158	+	.	.
scaffold814	subtractBed	intrn	86488	87855	.	+	.	Parent=CGI_10008194;
	scaffold814	WUBlastX	LTR_Ngaro	86488	87855	949	-	.	.
scaffold814	subtractBed	intrn	86503	88095	.	+	.	Parent=CGI_10008194;
	scaffold814	WUBlastX	LTR_Ngaro	86503	88095	813	-	.	.
scaffold814	subtractBed	intrn	85526	86416	.	+	.	Parent=CGI_10008194;
	scaffold814	WUBlastX	LTR_Ngaro	85526	86416	290	-	.	.
scaffold814	subtractBed	intrn	86461	86604	.	+	.	Parent=CGI_10008194;
	scaffold814	WUBlastX	LTR_Gypsy	86461	86604	27	-	.	.
scaffold814	subtractBed	intrn	112744	112857	.	+	.	Parent=CGI_10008197;
	scaffold814	TRF	Tandem_Repeat	112744	112857	180	+	.	.
scaffold814	subtractBed	intrn	118135	118176	.	-	.	Parent=CGI_10008198;
	scaffold814	TRF	Tandem_Repeat	118135	118176	66	+	.	.
scaffold814	subtractBed	intrn	118122	118173	.	-	.	Parent=CGI_10008198;
	scaffold814	TRF	Tandem_Repeat	118122	118173	77	+	.	.
scaffold814	subtractBed	intrn	118122	118176	.	-	.	Parent=CGI_10008198;
	scaffold814	TRF	Tandem_Repeat	118122	118176	83	+	.	.
scaffold814	subtractBed	intrn	120737	120839	.	-	.	Parent=CGI_10008198;
	scaffold814	TRF	Tandem_Repeat	120737	120839	91	+	.	.
scaffold814	subtractBed	intrn	135984	136043	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	135984	136043	120	+	.	.
scaffold814	subtractBed	intrn	150508	150543	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	150508	150543	72	+	.	.
scaffold814	subtractBed	intrn	151885	151985	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	151885	151985	60	+	.	.
scaffold814	subtractBed	intrn	151453	152044	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	151453	152044	963	+	.	.
scaffold814	subtractBed	intrn	153119	153333	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	153119	153333	178	+	.	.
scaffold814	subtractBed	intrn	171211	171268	.	-	.	Parent=CGI_10008201;
	scaffold814	TRF	Tandem_Repeat	171211	171268	107	+	.	.
scaffold815	subtractBed	intrn	8896	9258	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	8896	9258	145	+	.	.
scaffold815	subtractBed	intrn	9276	9440	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	9276	9440	111	+	.	.
scaffold815	subtractBed	intrn	9458	9967	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	9458	9967	89	+	.	.
scaffold815	subtractBed	intrn	11395	11589	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	11395	11589	66	+	.	.
scaffold815	subtractBed	intrn	8899	9399	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	8899	9399	116	+	.	.
scaffold815	subtractBed	intrn	11395	11673	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	11395	11673	47	+	.	.
scaffold815	subtractBed	intrn	7793	8050	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	7793	8050	37	+	.	.
scaffold815	subtractBed	intrn	7853	8206	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	7853	8206	75	+	.	.
scaffold815	subtractBed	intrn	9479	9802	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	9479	9802	103	+	.	.
scaffold815	subtractBed	intrn	10487	10561	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_CR1	10487	10561	22	+	.	.
scaffold815	subtractBed	intrn	10632	11174	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	10632	11174	41	+	.	.
scaffold815	subtractBed	intrn	11395	11550	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	11395	11550	90	+	.	.
scaffold815	subtractBed	intrn	10635	11315	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	LINE_RTE-X	10635	11315	23	+	.	.
scaffold815	subtractBed	intrn	17894	17942	.	-	.	Parent=CGI_10001932;
	scaffold815	TRF	Tandem_Repeat	17894	17942	98	+	.	.
scaffold815	subtractBed	intrn	18679	18712	.	-	.	Parent=CGI_10001932;
	scaffold815	TRF	Tandem_Repeat	18679	18712	50	+	.	.
scaffold815	subtractBed	intrn	19971	21215	.	-	.	Parent=CGI_10001932;
	scaffold815	WUBlastX	DNA_hAT-hATw	19971	21215	420	-	.	.
scaffold816	subtractBed	intrn	184462	184534	.	+	.	Parent=CGI_10015654;
	scaffold816	TRF	Tandem_Repeat	184462	184534	146	+	.	.
scaffold816	subtractBed	intrn	229897	230046	.	+	.	Parent=CGI_10015655;
	scaffold816	WUBlastX	DNA_TcMar-Tc1	229897	230046	65	-	.	.
scaffold816	subtractBed	intrn	229488	229742	.	+	.	Parent=CGI_10015655;
	scaffold816	WUBlastX	DNA_TcMar-Tc1	229488	229742	49	-	.	.
scaffold816	subtractBed	intrn	229476	229697	.	+	.	Parent=CGI_10015655;
	scaffold816	WUBlastX	DNA_TcMar-Tc1	229476	229697	66	-	.	.
scaffold816	subtractBed	intrn	229846	230040	.	+	.	Parent=CGI_10015655;
	scaffold816	WUBlastX	DNA_TcMar-Tc1	229846	230040	54	-	.	.
scaffold817	subtractBed	intrn	47536	47538	.	-	.	Parent=CGI_10008654;
	scaffold817	WUBlastX	DNA_MuDR	47536	47769	33	-	.	.
scaffold817	subtractBed	intrn	47880	48005	.	-	.	Parent=CGI_10008654;
	scaffold817	WUBlastX	DNA_MuDR	47880	48005	59	-	.	.
scaffold817	subtractBed	intrn	47886	48044	.	-	.	Parent=CGI_10008654;
	scaffold817	WUBlastX	DNA_MuDR	47886	48044	54	-	.	.
scaffold817	subtractBed	intrn	54990	56162	.	-	.	Parent=CGI_10008657;
	scaffold817	WUBlastX	LTR_Copia	54990	56162	120	-	.	.
scaffold817	subtractBed	intrn	55167	56351	.	-	.	Parent=CGI_10008657;
	scaffold817	WUBlastX	LTR_Gypsy-Cigr	55167	56351	798	-	.	.
scaffold817	subtractBed	intrn	66190	66241	.	-	.	Parent=CGI_10008657;
	scaffold817	TRF	Tandem_Repeat	66190	66241	104	+	.	.
scaffold817	subtractBed	intrn	67852	68100	.	-	.	Parent=CGI_10008657;
	scaffold817	WUBlastX	DNA_Kolobok	67852	68100	113	-	.	.
scaffold817	subtractBed	intrn	152367	152407	.	-	.	Parent=CGI_10008666;
	scaffold817	TRF	Tandem_Repeat	152367	152407	82	+	.	.
scaffold818	subtractBed	intrn	107102	107129	.	+	.	Parent=CGI_10014509;
	scaffold818	TRF	Tandem_Repeat	107102	107129	56	+	.	.
scaffold818	subtractBed	intrn	114838	115052	.	+	.	Parent=CGI_10014509;
	scaffold818	TRF	Tandem_Repeat	114838	115052	140	+	.	.
scaffold818	subtractBed	intrn	242575	243012	.	-	.	Parent=CGI_10014511;
	scaffold818	TRF	Tandem_Repeat	242575	243012	723	+	.	.
scaffold818	subtractBed	intrn	247095	247305	.	-	.	Parent=CGI_10014511;
	scaffold818	TRF	Tandem_Repeat	247095	247305	334	+	.	.
scaffold818	subtractBed	intrn	248387	249104	.	-	.	Parent=CGI_10014511;
	scaffold818	TRF	Tandem_Repeat	248387	249104	1130	+	.	.
scaffold818	subtractBed	intrn	259979	260204	.	+	.	Parent=CGI_10014514;
	scaffold818	TRF	Tandem_Repeat	259979	260204	452	+	.	.
scaffold818	subtractBed	intrn	278621	278839	.	+	.	Parent=CGI_10014515;
	scaffold818	WUBlastX	LINE_CR1-L2	278621	278839	45	-	.	.
scaffold818	subtractBed	intrn	278876	279004	.	+	.	Parent=CGI_10014515;
	scaffold818	WUBlastX	LINE_CR1-L2	278876	279004	29	-	.	.
scaffold818	subtractBed	intrn	295187	295220	.	+	.	Parent=CGI_10014516;
	scaffold818	TRF	Tandem_Repeat	295187	295220	68	+	.	.
scaffold818	subtractBed	intrn	323223	323463	.	-	.	Parent=CGI_10014518;
	scaffold818	TRF	Tandem_Repeat	323223	323463	135	+	.	.
scaffold818	subtractBed	intrn	324750	324780	.	-	.	Parent=CGI_10014518;
	scaffold818	TRF	Tandem_Repeat	324750	324780	62	+	.	.
scaffold818	subtractBed	intrn	376266	376333	.	+	.	Parent=CGI_10014522;
	scaffold818	TRF	Tandem_Repeat	376266	376333	118	+	.	.
scaffold818	subtractBed	intrn	379906	379953	.	+	.	Parent=CGI_10014522;
	scaffold818	TRF	Tandem_Repeat	379906	379953	80	+	.	.
scaffold818	subtractBed	intrn	379906	379953	.	-	.	Parent=CGI_10014523;
	scaffold818	TRF	Tandem_Repeat	379906	379953	80	+	.	.
scaffold818	subtractBed	intrn	381451	381521	.	-	.	Parent=CGI_10014524;
	scaffold818	TRF	Tandem_Repeat	381451	381521	92	+	.	.
scaffold818	subtractBed	intrn	399021	399076	.	+	.	Parent=CGI_10014525;
	scaffold818	TRF	Tandem_Repeat	399021	399076	62	+	.	.
scaffold819	subtractBed	intrn	44574	44602	.	+	.	Parent=CGI_10003889;
	scaffold819	TRF	Tandem_Repeat	44574	44602	58	+	.	.
scaffold819	subtractBed	intrn	49298	49343	.	+	.	Parent=CGI_10003889;
	scaffold819	TRF	Tandem_Repeat	49298	49343	92	+	.	.
scaffold819	subtractBed	intrn	53048	53130	.	+	.	Parent=CGI_10003889;
	scaffold819	TRF	Tandem_Repeat	53048	53130	69	+	.	.
scaffold819	subtractBed	intrn	53047	53122	.	+	.	Parent=CGI_10003889;
	scaffold819	TRF	Tandem_Repeat	53047	53122	89	+	.	.
scaffold819	subtractBed	intrn	49524	49775	.	+	.	Parent=CGI_10003889;
	scaffold819	WUBlastX	LINE_L2	49524	49775	45	-	.	.
scaffold819	subtractBed	intrn	73043	73085	.	+	.	Parent=CGI_10003890;
	scaffold819	TRF	Tandem_Repeat	73043	73085	50	+	.	.
scaffold819	subtractBed	intrn	73047	73089	.	+	.	Parent=CGI_10003890;
	scaffold819	TRF	Tandem_Repeat	73047	73089	59	+	.	.
scaffold82	subtractBed	intrn	12374	12587	.	-	.	Parent=CGI_10025237;
	scaffold82	TRF	Tandem_Repeat	12374	12587	320	+	.	.
scaffold82	subtractBed	intrn	13842	13998	.	-	.	Parent=CGI_10025237;
	scaffold82	TRF	Tandem_Repeat	13842	13998	233	+	.	.
scaffold82	subtractBed	intrn	33807	34123	.	-	.	Parent=CGI_10025238;
	scaffold82	TRF	Tandem_Repeat	33807	34123	430	+	.	.
scaffold82	subtractBed	intrn	119526	119586	.	+	.	Parent=CGI_10025240;
	scaffold82	TRF	Tandem_Repeat	119526	119586	122	+	.	.
scaffold82	subtractBed	intrn	121733	121774	.	+	.	Parent=CGI_10025240;
	scaffold82	TRF	Tandem_Repeat	121733	121774	84	+	.	.
scaffold82	subtractBed	intrn	128637	129112	.	+	.	Parent=CGI_10025240;
	scaffold82	TRF	Tandem_Repeat	128637	129112	243	+	.	.
scaffold82	subtractBed	intrn	128652	129172	.	+	.	Parent=CGI_10025240;
	scaffold82	TRF	Tandem_Repeat	128652	129172	726	+	.	.
scaffold82	subtractBed	intrn	183327	183379	.	+	.	Parent=CGI_10025244;
	scaffold82	TRF	Tandem_Repeat	183327	183379	106	+	.	.
scaffold82	subtractBed	intrn	185131	185829	.	+	.	Parent=CGI_10025244;
	scaffold82	WUBlastX	LINE_I-Nimb	185131	185829	80	-	.	.
scaffold82	subtractBed	intrn	184246	184665	.	+	.	Parent=CGI_10025244;
	scaffold82	WUBlastX	LINE_RTE-X	184246	184665	101	-	.	.
scaffold82	subtractBed	intrn	185134	185610	.	+	.	Parent=CGI_10025244;
	scaffold82	WUBlastX	LINE_RTE-X	185134	185610	232	-	.	.
scaffold82	subtractBed	intrn	184363	184626	.	+	.	Parent=CGI_10025244;
	scaffold82	WUBlastX	LINE_RTE-X	184363	184626	122	-	.	.
scaffold82	subtractBed	intrn	185134	185523	.	+	.	Parent=CGI_10025244;
	scaffold82	WUBlastX	LINE_RTE-X	185134	185523	271	-	.	.
scaffold82	subtractBed	intrn	207273	207302	.	-	.	Parent=CGI_10025247;
	scaffold82	TRF	Tandem_Repeat	207273	207302	53	+	.	.
scaffold82	subtractBed	intrn	214904	215809	.	+	.	Parent=CGI_10025248;
	scaffold82	WUBlastX	LINE_L2	214904	215809	559	-	.	.
scaffold82	subtractBed	intrn	213923	215800	.	+	.	Parent=CGI_10025248;
	scaffold82	WUBlastX	LINE_CR1-L2	213923	215800	370	-	.	.
scaffold82	subtractBed	intrn	220284	220347	.	+	.	Parent=CGI_10025248;
	scaffold82	TRF	Tandem_Repeat	220284	220347	121	+	.	.
scaffold82	subtractBed	intrn	272283	272417	.	+	.	Parent=CGI_10025252;
	scaffold82	TRF	Tandem_Repeat	272283	272417	135	+	.	.
scaffold82	subtractBed	intrn	272291	272417	.	+	.	Parent=CGI_10025252;
	scaffold82	TRF	Tandem_Repeat	272291	272417	154	+	.	.
scaffold82	subtractBed	intrn	272495	272498	.	+	.	Parent=CGI_10025252;
	scaffold82	WUBlastX	DNA_Sola	272495	273016	124	+	.	.
scaffold82	subtractBed	intrn	393702	393760	.	-	.	Parent=CGI_10025261;
	scaffold82	TRF	Tandem_Repeat	393702	393760	50	+	.	.
scaffold82	subtractBed	intrn	556448	557005	.	-	.	Parent=CGI_10025265;
	scaffold82	WUBlastX	LINE_RTE-X	556448	557005	116	-	.	.
scaffold82	subtractBed	intrn	556574	557023	.	-	.	Parent=CGI_10025265;
	scaffold82	WUBlastX	LINE_RTE-X	556574	557023	133	-	.	.
scaffold82	subtractBed	intrn	685173	685199	.	-	.	Parent=CGI_10025267;
	scaffold82	TRF	Tandem_Repeat	685173	685199	54	+	.	.
scaffold82	subtractBed	intrn	687420	687830	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	687420	687830	79	-	.	.
scaffold82	subtractBed	intrn	687055	687429	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1	687055	687429	105	-	.	.
scaffold82	subtractBed	intrn	686689	687372	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	686689	687372	148	-	.	.
scaffold82	subtractBed	intrn	687516	687845	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	687516	687845	169	-	.	.
scaffold82	subtractBed	intrn	688852	688929	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_RTE-BovB	688852	688929	20	-	.	.
scaffold82	subtractBed	intrn	688533	688580	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	688533	688580	38	-	.	.
scaffold82	subtractBed	intrn	688533	688589	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1	688533	688589	36	-	.	.
scaffold82	subtractBed	intrn	688407	688580	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1	688407	688580	23	-	.	.
scaffold82	subtractBed	intrn	688612	688911	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	688612	688911	89	-	.	.
scaffold82	subtractBed	intrn	688929	689171	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	688929	689171	152	-	.	.
scaffold82	subtractBed	intrn	688941	689228	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1	688941	689228	55	-	.	.
scaffold82	subtractBed	intrn	687827	688393	.	-	.	Parent=CGI_10025267;
	scaffold82	WUBlastX	LINE_L1-Tx1	687827	688393	197	-	.	.
scaffold82	subtractBed	intrn	745263	745296	.	-	.	Parent=CGI_10025268;
	scaffold82	TRF	Tandem_Repeat	745263	745296	59	+	.	.
scaffold82	subtractBed	intrn	750693	750724	.	-	.	Parent=CGI_10025268;
	scaffold82	TRF	Tandem_Repeat	750693	750724	55	+	.	.
scaffold82	subtractBed	intrn	753815	753946	.	-	.	Parent=CGI_10025268;
	scaffold82	WUBlastX	DNA_Kolobok	753815	753946	58	+	.	.
scaffold82	subtractBed	intrn	754358	754498	.	-	.	Parent=CGI_10025268;
	scaffold82	WUBlastX	DNA_Kolobok	754358	754498	36	-	.	.
scaffold82	subtractBed	intrn	766215	766249	.	-	.	Parent=CGI_10025269;
	scaffold82	TRF	Tandem_Repeat	766215	766249	70	+	.	.
scaffold82	subtractBed	intrn	766557	766588	.	-	.	Parent=CGI_10025269;
	scaffold82	TRF	Tandem_Repeat	766557	766588	55	+	.	.
scaffold82	subtractBed	intrn	766730	766769	.	-	.	Parent=CGI_10025269;
	scaffold82	TRF	Tandem_Repeat	766730	766769	71	+	.	.
scaffold82	subtractBed	intrn	766860	766902	.	-	.	Parent=CGI_10025269;
	scaffold82	TRF	Tandem_Repeat	766860	766902	86	+	.	.
scaffold82	subtractBed	intrn	791205	791316	.	-	.	Parent=CGI_10025270;
	scaffold82	TRF	Tandem_Repeat	791205	791316	92	+	.	.
scaffold82	subtractBed	intrn	791428	791523	.	-	.	Parent=CGI_10025270;
	scaffold82	TRF	Tandem_Repeat	791428	791523	97	+	.	.
scaffold82	subtractBed	intrn	791346	791523	.	-	.	Parent=CGI_10025270;
	scaffold82	TRF	Tandem_Repeat	791346	791523	138	+	.	.
scaffold82	subtractBed	intrn	835981	836052	.	+	.	Parent=CGI_10025273;
	scaffold82	TRF	Tandem_Repeat	835981	836052	135	+	.	.
scaffold82	subtractBed	intrn	842267	842328	.	+	.	Parent=CGI_10025273;
	scaffold82	TRF	Tandem_Repeat	842267	842328	106	+	.	.
scaffold82	subtractBed	intrn	860314	860355	.	+	.	Parent=CGI_10025274;
	scaffold82	TRF	Tandem_Repeat	860314	860355	84	+	.	.
scaffold82	subtractBed	intrn	860482	860537	.	+	.	Parent=CGI_10025274;
	scaffold82	TRF	Tandem_Repeat	860482	860537	112	+	.	.
scaffold82	subtractBed	intrn	910020	910126	.	-	.	Parent=CGI_10025278;
	scaffold82	TRF	Tandem_Repeat	910020	910126	142	+	.	.
scaffold82	subtractBed	intrn	911614	911759	.	-	.	Parent=CGI_10025278;
	scaffold82	TRF	Tandem_Repeat	911614	911759	112	+	.	.
scaffold82	subtractBed	intrn	911635	911759	.	-	.	Parent=CGI_10025278;
	scaffold82	TRF	Tandem_Repeat	911635	911759	133	+	.	.
scaffold82	subtractBed	intrn	950541	951847	.	+	.	Parent=CGI_10025279;
	scaffold82	TRF	Tandem_Repeat	950522	951847	1740	+	.	.
scaffold82	subtractBed	intrn	950541	951847	.	+	.	Parent=CGI_10025279;
	scaffold82	TRF	Tandem_Repeat	950522	951847	1740	+	.	.
scaffold82	subtractBed	intrn	950541	951516	.	+	.	Parent=CGI_10025279;
	scaffold82	TRF	Tandem_Repeat	950522	951516	1659	+	.	.
scaffold82	subtractBed	intrn	951555	951678	.	+	.	Parent=CGI_10025279;
	scaffold82	TRF	Tandem_Repeat	951555	951678	131	+	.	.
scaffold82	subtractBed	intrn	951684	951861	.	+	.	Parent=CGI_10025279;
	scaffold82	TRF	Tandem_Repeat	951684	951861	137	+	.	.
scaffold82	subtractBed	intrn	968917	968956	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	968917	968956	62	+	.	.
scaffold82	subtractBed	intrn	975971	976198	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	975971	976198	320	+	.	.
scaffold82	subtractBed	intrn	978536	978585	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	978536	978585	75	+	.	.
scaffold82	subtractBed	intrn	980353	980629	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	980353	980629	491	+	.	.
scaffold82	subtractBed	intrn	988055	988589	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	988055	988589	528	+	.	.
scaffold82	subtractBed	intrn	990940	991632	.	-	.	Parent=CGI_10025280;
	scaffold82	TRF	Tandem_Repeat	990940	991632	1223	+	.	.
scaffold82	subtractBed	intrn	1017496	1017586	.	+	.	Parent=CGI_10025281;
	scaffold82	TRF	Tandem_Repeat	1017496	1017586	59	+	.	.
scaffold82	subtractBed	intrn	1033254	1033288	.	+	.	Parent=CGI_10025281;
	scaffold82	TRF	Tandem_Repeat	1033254	1033288	63	+	.	.
scaffold823	subtractBed	intrn	59986	60549	.	-	.	Parent=CGI_10004169;
	scaffold823	WUBlastX	LTR_Gypsy	59986	60549	473	+	.	.
scaffold823	subtractBed	intrn	59441	59995	.	-	.	Parent=CGI_10004169;
	scaffold823	WUBlastX	LTR_Gypsy	59441	59995	386	+	.	.
scaffold823	subtractBed	intrn	65224	65336	.	-	.	Parent=CGI_10004169;
	scaffold823	TRF	Tandem_Repeat	65224	65336	115	+	.	.
scaffold825	subtractBed	intrn	96752	96790	.	-	.	Parent=CGI_10012704;
	scaffold825	TRF	Tandem_Repeat	96752	96790	78	+	.	.
scaffold825	subtractBed	intrn	97816	97859	.	-	.	Parent=CGI_10012704;
	scaffold825	TRF	Tandem_Repeat	97816	97859	88	+	.	.
scaffold825	subtractBed	intrn	110453	112219	.	-	.	Parent=CGI_10012705;
	scaffold825	TRF	Tandem_Repeat	110453	112219	3381	+	.	.
scaffold825	subtractBed	intrn	114354	114386	.	-	.	Parent=CGI_10012705;
	scaffold825	TRF	Tandem_Repeat	114354	114386	66	+	.	.
scaffold825	subtractBed	intrn	119236	119283	.	-	.	Parent=CGI_10012705;
	scaffold825	WUBlastX	LTR_Ngaro	119236	119283	20	+	.	.
scaffold825	subtractBed	intrn	118445	119245	.	-	.	Parent=CGI_10012705;
	scaffold825	WUBlastX	LTR_Ngaro	118445	119245	220	+	.	.
scaffold825	subtractBed	intrn	129905	130682	.	-	.	Parent=CGI_10012706;
	scaffold825	TRF	Tandem_Repeat	129905	130682	1122	+	.	.
scaffold825	subtractBed	intrn	131721	131747	.	-	.	Parent=CGI_10012706;
	scaffold825	TRF	Tandem_Repeat	131721	131747	54	+	.	.
scaffold825	subtractBed	intrn	133044	133079	.	-	.	Parent=CGI_10012706;
	scaffold825	TRF	Tandem_Repeat	133044	133079	54	+	.	.
scaffold825	subtractBed	intrn	137914	138007	.	-	.	Parent=CGI_10012706;
	scaffold825	TRF	Tandem_Repeat	137914	138007	134	+	.	.
scaffold825	subtractBed	intrn	138056	138154	.	-	.	Parent=CGI_10012706;
	scaffold825	TRF	Tandem_Repeat	138056	138154	148	+	.	.
scaffold825	subtractBed	intrn	147143	147230	.	-	.	Parent=CGI_10012707;
	scaffold825	TRF	Tandem_Repeat	147143	147230	142	+	.	.
scaffold825	subtractBed	intrn	155276	155312	.	-	.	Parent=CGI_10012708;
	scaffold825	TRF	Tandem_Repeat	155276	155312	74	+	.	.
scaffold825	subtractBed	intrn	172441	172484	.	-	.	Parent=CGI_10012709;
	scaffold825	TRF	Tandem_Repeat	172441	172484	79	+	.	.
scaffold825	subtractBed	intrn	178852	178879	.	-	.	Parent=CGI_10012710;
	scaffold825	TRF	Tandem_Repeat	178852	178879	56	+	.	.
scaffold825	subtractBed	intrn	196679	196720	.	+	.	Parent=CGI_10012712;
	scaffold825	TRF	Tandem_Repeat	196679	196720	84	+	.	.
scaffold825	subtractBed	intrn	197046	197501	.	+	.	Parent=CGI_10012712;
	scaffold825	WUBlastX	LINE_L1-Tx1	197046	197501	38	-	.	.
scaffold825	subtractBed	intrn	197046	197429	.	+	.	Parent=CGI_10012712;
	scaffold825	WUBlastX	LINE_L1-Tx1	197046	197429	64	-	.	.
scaffold825	subtractBed	intrn	196572	196615	.	+	.	Parent=CGI_10012712;
	scaffold825	TRF	Tandem_Repeat	196572	196615	88	+	.	.
scaffold825	subtractBed	intrn	200073	200113	.	+	.	Parent=CGI_10012712;
	scaffold825	TRF	Tandem_Repeat	200073	200113	55	+	.	.
scaffold825	subtractBed	intrn	200819	201104	.	+	.	Parent=CGI_10012712;
	scaffold825	TRF	Tandem_Repeat	200819	201104	216	+	.	.
scaffold825	subtractBed	intrn	201992	202309	.	+	.	Parent=CGI_10012712;
	scaffold825	TRF	Tandem_Repeat	201992	202309	530	+	.	.
scaffold825	subtractBed	intrn	236995	237028	.	+	.	Parent=CGI_10012713;
	scaffold825	TRF	Tandem_Repeat	236995	237028	68	+	.	.
scaffold825	subtractBed	intrn	242978	243289	.	-	.	Parent=CGI_10012714;
	scaffold825	WUBlastX	LTR_Ngaro	242978	243289	88	+	.	.
scaffold825	subtractBed	intrn	262654	263238	.	+	.	Parent=CGI_10012716;
	scaffold825	TRF	Tandem_Repeat	262654	263238	648	+	.	.
scaffold825	subtractBed	intrn	294806	294842	.	-	.	Parent=CGI_10012718;
	scaffold825	TRF	Tandem_Repeat	294806	294842	65	+	.	.
scaffold825	subtractBed	intrn	294841	294871	.	-	.	Parent=CGI_10012718;
	scaffold825	TRF	Tandem_Repeat	294841	294871	62	+	.	.
scaffold827	subtractBed	intrn	73671	73719	.	-	.	Parent=CGI_10007011;
	scaffold827	TRF	Tandem_Repeat	73671	73719	64	+	.	.
scaffold827	subtractBed	intrn	73676	73718	.	-	.	Parent=CGI_10007011;
	scaffold827	TRF	Tandem_Repeat	73676	73718	50	+	.	.
scaffold827	subtractBed	intrn	109961	110010	.	+	.	Parent=CGI_10007012;
	scaffold827	TRF	Tandem_Repeat	109961	110010	91	+	.	.
scaffold827	subtractBed	intrn	111518	111561	.	+	.	Parent=CGI_10007012;
	scaffold827	TRF	Tandem_Repeat	111518	111561	70	+	.	.
scaffold827	subtractBed	intrn	149607	150395	.	-	.	Parent=CGI_10007013;
	scaffold827	TRF	Tandem_Repeat	149607	150395	1106	+	.	.
scaffold828	subtractBed	intrn	4086	4236	.	-	.	Parent=CGI_10007361;
	scaffold828	TRF	Tandem_Repeat	4086	4236	142	+	.	.
scaffold828	subtractBed	intrn	4140	4384	.	-	.	Parent=CGI_10007361;
	scaffold828	TRF	Tandem_Repeat	4140	4384	308	+	.	.
scaffold828	subtractBed	intrn	17095	17237	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	17095	17237	162	+	.	.
scaffold828	subtractBed	intrn	17232	17332	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	17232	17332	103	+	.	.
scaffold828	subtractBed	intrn	18002	18146	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	18002	18146	114	+	.	.
scaffold828	subtractBed	intrn	17966	18177	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	17966	18177	157	+	.	.
scaffold828	subtractBed	intrn	18563	18923	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	18563	18923	106	+	.	.
scaffold828	subtractBed	intrn	18533	18923	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	18533	18923	284	+	.	.
scaffold828	subtractBed	intrn	21183	22046	.	+	.	Parent=CGI_10007363;
	scaffold828	WUBlastX	LINE_L1-Tx1	21183	22046	90	-	.	.
scaffold828	subtractBed	intrn	24214	24249	.	+	.	Parent=CGI_10007363;
	scaffold828	TRF	Tandem_Repeat	24214	24249	54	+	.	.
scaffold828	subtractBed	intrn	17095	17237	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	17095	17237	162	+	.	.
scaffold828	subtractBed	intrn	17232	17332	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	17232	17332	103	+	.	.
scaffold828	subtractBed	intrn	18002	18146	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	18002	18146	114	+	.	.
scaffold828	subtractBed	intrn	17966	18177	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	17966	18177	157	+	.	.
scaffold828	subtractBed	intrn	18563	18923	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	18563	18923	106	+	.	.
scaffold828	subtractBed	intrn	18533	18923	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	18533	18923	284	+	.	.
scaffold828	subtractBed	intrn	21183	22046	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L1-Tx1	21183	22046	90	-	.	.
scaffold828	subtractBed	intrn	24214	24249	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	24214	24249	54	+	.	.
scaffold828	subtractBed	intrn	35597	35639	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	35597	35639	86	+	.	.
scaffold828	subtractBed	intrn	48383	48534	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	48383	48534	65	+	.	.
scaffold828	subtractBed	intrn	52812	52843	.	-	.	Parent=CGI_10007364;
	scaffold828	TRF	Tandem_Repeat	52812	52843	55	+	.	.
scaffold828	subtractBed	intrn	53717	53971	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L2	53717	53971	76	+	.	.
scaffold828	subtractBed	intrn	54463	54657	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L1	54463	54657	116	+	.	.
scaffold828	subtractBed	intrn	53732	53923	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L2	53732	53923	76	+	.	.
scaffold828	subtractBed	intrn	53549	53971	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L2	53549	53971	45	+	.	.
scaffold828	subtractBed	intrn	53762	54010	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L2	53762	54010	43	+	.	.
scaffold828	subtractBed	intrn	58582	59598	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	DNA_TcMar-Tc2	58582	59598	196	-	.	.
scaffold828	subtractBed	intrn	58405	59322	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	DNA_TcMar-Tc2	58405	59322	143	-	.	.
scaffold828	subtractBed	intrn	58591	59280	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	DNA_TcMar-Tc2	58591	59280	197	-	.	.
scaffold828	subtractBed	intrn	75713	77839	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L1-Tx1	75713	77839	341	+	.	.
scaffold828	subtractBed	intrn	75632	76267	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L1-Tx1	75632	76267	344	+	.	.
scaffold828	subtractBed	intrn	76766	77839	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L1-Tx1	76766	77839	777	+	.	.
scaffold828	subtractBed	intrn	74830	75552	.	-	.	Parent=CGI_10007364;
	scaffold828	WUBlastX	LINE_L2	74830	75552	97	+	.	.
scaffold828	subtractBed	intrn	80573	80601	.	-	.	Parent=CGI_10007365;
	scaffold828	TRF	Tandem_Repeat	80573	80601	51	+	.	.
scaffold828	subtractBed	intrn	80933	81091	.	-	.	Parent=CGI_10007365;
	scaffold828	WUBlastX	LINE_L1-Tx1	80933	81091	22	-	.	.
scaffold828	subtractBed	intrn	81917	82186	.	-	.	Parent=CGI_10007365;
	scaffold828	WUBlastX	LINE_L1-Tx1	81917	82186	145	-	.	.
scaffold828	subtractBed	intrn	81866	82183	.	-	.	Parent=CGI_10007365;
	scaffold828	WUBlastX	LINE_L1-Tx1	81866	82183	93	-	.	.
scaffold828	subtractBed	intrn	81920	82477	.	-	.	Parent=CGI_10007365;
	scaffold828	WUBlastX	LINE_L1-Tx1	81920	82477	47	-	.	.
scaffold828	subtractBed	intrn	89965	90016	.	-	.	Parent=CGI_10007365;
	scaffold828	TRF	Tandem_Repeat	89965	90016	86	+	.	.
scaffold828	subtractBed	intrn	90081	90281	.	-	.	Parent=CGI_10007365;
	scaffold828	WUBlastX	LINE_RTE-X	90081	90281	86	+	.	.
scaffold828	subtractBed	intrn	97448	97972	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	97448	97972	81	-	.	.
scaffold828	subtractBed	intrn	95908	95973	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	95908	95973	32	-	.	.
scaffold828	subtractBed	intrn	96257	97891	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	96257	97891	216	-	.	.
scaffold828	subtractBed	intrn	95925	96194	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Copia	95925	96194	62	-	.	.
scaffold828	subtractBed	intrn	95826	96260	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	95826	96260	31	-	.	.
scaffold828	subtractBed	intrn	95976	97124	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	95976	97124	212	-	.	.
scaffold828	subtractBed	intrn	97448	97891	.	-	.	Parent=CGI_10007366;
	scaffold828	WUBlastX	LTR_Gypsy	97448	97891	222	-	.	.
scaffold828	subtractBed	intrn	99761	100455	.	-	.	Parent=CGI_10007366;
	scaffold828	TRF	Tandem_Repeat	99761	100455	1049	+	.	.
scaffold828	subtractBed	intrn	107537	107753	.	-	.	Parent=CGI_10007366;
	scaffold828	TRF	Tandem_Repeat	107537	107753	208	+	.	.
scaffold828	subtractBed	intrn	159435	159525	.	+	.	Parent=CGI_10007369;
	scaffold828	TRF	Tandem_Repeat	159435	159525	71	+	.	.
scaffold828	subtractBed	intrn	159732	159822	.	+	.	Parent=CGI_10007369;
	scaffold828	TRF	Tandem_Repeat	159732	159822	71	+	.	.
scaffold828	subtractBed	intrn	171714	172358	.	-	.	Parent=CGI_10007370;
	scaffold828	WUBlastX	DNA_TcMar-Fot1	171714	172358	199	-	.	.
scaffold828	subtractBed	intrn	172390	172923	.	-	.	Parent=CGI_10007370;
	scaffold828	WUBlastX	DNA_TcMar-Fot1	172390	172923	149	-	.	.
scaffold828	subtractBed	intrn	171103	171381	.	-	.	Parent=CGI_10007370;
	scaffold828	WUBlastX	DNA_IS4EU	171103	171381	20	-	.	.
scaffold828	subtractBed	intrn	171297	172394	.	-	.	Parent=CGI_10007370;
	scaffold828	WUBlastX	DNA_TcMar-Fot1	171297	172394	158	-	.	.
scaffold829	subtractBed	intrn	50507	50651	.	-	.	Parent=CGI_10021136;
	scaffold829	TRF	Tandem_Repeat	50507	50651	119	+	.	.
scaffold829	subtractBed	intrn	50509	50652	.	-	.	Parent=CGI_10021136;
	scaffold829	TRF	Tandem_Repeat	50509	50652	135	+	.	.
scaffold829	subtractBed	intrn	82392	82531	.	-	.	Parent=CGI_10021139;
	scaffold829	WUBlastX	LINE_L2	82392	82772	49	-	.	.
scaffold829	subtractBed	intrn	82431	82531	.	-	.	Parent=CGI_10021139;
	scaffold829	WUBlastX	LINE_L1	82431	82748	52	-	.	.
scaffold829	subtractBed	intrn	99572	99745	.	+	.	Parent=CGI_10021140;
	scaffold829	WUBlastX	DNA_hAT-Tip100	99572	99745	143	-	.	.
scaffold829	subtractBed	intrn	99518	99745	.	+	.	Parent=CGI_10021140;
	scaffold829	WUBlastX	DNA_hAT-Tip100	99518	99745	61	-	.	.
scaffold829	subtractBed	intrn	270786	270826	.	+	.	Parent=CGI_10021143;
	scaffold829	TRF	Tandem_Repeat	270786	270826	73	+	.	.
scaffold829	subtractBed	intrn	278404	279325	.	+	.	Parent=CGI_10021143;
	scaffold829	TRF	Tandem_Repeat	278404	279325	1237	+	.	.
scaffold829	subtractBed	intrn	301822	301879	.	+	.	Parent=CGI_10021143;
	scaffold829	TRF	Tandem_Repeat	301822	301879	116	+	.	.
scaffold829	subtractBed	intrn	304628	304707	.	+	.	Parent=CGI_10021143;
	scaffold829	TRF	Tandem_Repeat	304628	304707	54	+	.	.
scaffold829	subtractBed	intrn	450037	450192	.	-	.	Parent=CGI_10021146;
	scaffold829	TRF	Tandem_Repeat	450037	450192	186	+	.	.
scaffold829	subtractBed	intrn	450080	450394	.	-	.	Parent=CGI_10021146;
	scaffold829	TRF	Tandem_Repeat	450080	450394	364	+	.	.
scaffold829	subtractBed	intrn	450190	450330	.	-	.	Parent=CGI_10021146;
	scaffold829	TRF	Tandem_Repeat	450190	450330	255	+	.	.
scaffold829	subtractBed	intrn	450203	450373	.	-	.	Parent=CGI_10021146;
	scaffold829	TRF	Tandem_Repeat	450203	450373	101	+	.	.
scaffold829	subtractBed	intrn	464786	464846	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	464786	464846	122	+	.	.
scaffold829	subtractBed	intrn	468727	468793	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	468727	468793	71	+	.	.
scaffold829	subtractBed	intrn	468718	468793	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	468718	468793	89	+	.	.
scaffold829	subtractBed	intrn	471024	471057	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	471024	471057	59	+	.	.
scaffold829	subtractBed	intrn	471625	471684	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	471625	471684	75	+	.	.
scaffold829	subtractBed	intrn	476630	476655	.	+	.	Parent=CGI_10021147;
	scaffold829	TRF	Tandem_Repeat	476630	476655	52	+	.	.
scaffold829	subtractBed	intrn	527337	527392	.	-	.	Parent=CGI_10021149;
	scaffold829	TRF	Tandem_Repeat	527337	527392	103	+	.	.
scaffold829	subtractBed	intrn	527884	528826	.	-	.	Parent=CGI_10021149;
	scaffold829	TRF	Tandem_Repeat	527884	528826	1041	+	.	.
scaffold829	subtractBed	intrn	527898	528929	.	-	.	Parent=CGI_10021149;
	scaffold829	TRF	Tandem_Repeat	527898	528929	917	+	.	.
scaffold829	subtractBed	intrn	527884	528957	.	-	.	Parent=CGI_10021149;
	scaffold829	TRF	Tandem_Repeat	527884	528957	1237	+	.	.
scaffold829	subtractBed	intrn	527907	529007	.	-	.	Parent=CGI_10021149;
	scaffold829	TRF	Tandem_Repeat	527907	529007	813	+	.	.
scaffold829	subtractBed	intrn	530624	530668	.	-	.	Parent=CGI_10021149;
	scaffold829	WUBlastX	LINE_Jockey	530471	530668	25	-	.	.
scaffold829	subtractBed	intrn	555212	555250	.	+	.	Parent=CGI_10021150;
	scaffold829	TRF	Tandem_Repeat	555212	555250	60	+	.	.
scaffold829	subtractBed	intrn	568564	569403	.	+	.	Parent=CGI_10021151;
	scaffold829	TRF	Tandem_Repeat	568564	569403	1290	+	.	.
scaffold829	subtractBed	intrn	579376	579410	.	+	.	Parent=CGI_10021152;
	scaffold829	TRF	Tandem_Repeat	579376	579410	70	+	.	.
scaffold829	subtractBed	intrn	581747	581779	.	+	.	Parent=CGI_10021152;
	scaffold829	TRF	Tandem_Repeat	581747	581779	66	+	.	.
scaffold829	subtractBed	intrn	594573	594602	.	+	.	Parent=CGI_10021152;
	scaffold829	TRF	Tandem_Repeat	594573	594602	60	+	.	.
scaffold829	subtractBed	intrn	592586	592807	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Pogo	592586	592807	118	-	.	.
scaffold829	subtractBed	intrn	592873	593073	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Pogo	592873	593073	73	-	.	.
scaffold829	subtractBed	intrn	592274	592804	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Pogo	592274	592804	112	-	.	.
scaffold829	subtractBed	intrn	592864	593028	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Pogo	592864	593028	101	-	.	.
scaffold829	subtractBed	intrn	592598	592846	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Pogo	592598	592846	113	-	.	.
scaffold829	subtractBed	intrn	592809	592871	.	+	.	Parent=CGI_10021152;
	scaffold829	WUBlastX	DNA_TcMar-Tigge	592809	592871	35	-	.	.
scaffold829	subtractBed	intrn	605741	605775	.	+	.	Parent=CGI_10021153;
	scaffold829	TRF	Tandem_Repeat	605741	605775	61	+	.	.
scaffold831	subtractBed	intrn	23710	23763	.	+	.	Parent=CGI_10010286;
	scaffold831	TRF	Tandem_Repeat	23710	23763	56	+	.	.
scaffold831	subtractBed	intrn	23710	23760	.	+	.	Parent=CGI_10010286;
	scaffold831	TRF	Tandem_Repeat	23710	23760	50	+	.	.
scaffold831	subtractBed	intrn	22267	22560	.	+	.	Parent=CGI_10010286;
	scaffold831	WUBlastX	LTR_Ngaro	22267	22560	45	+	.	.
scaffold831	subtractBed	intrn	30660	30718	.	+	.	Parent=CGI_10010286;
	scaffold831	TRF	Tandem_Repeat	30660	30718	118	+	.	.
scaffold831	subtractBed	intrn	86850	86953	.	+	.	Parent=CGI_10010289;
	scaffold831	TRF	Tandem_Repeat	86850	86953	120	+	.	.
scaffold831	subtractBed	intrn	104968	105018	.	+	.	Parent=CGI_10010290;
	scaffold831	TRF	Tandem_Repeat	104968	105018	68	+	.	.
scaffold831	subtractBed	intrn	109450	109539	.	+	.	Parent=CGI_10010290;
	scaffold831	TRF	Tandem_Repeat	109450	109539	51	+	.	.
scaffold831	subtractBed	intrn	111851	111910	.	+	.	Parent=CGI_10010290;
	scaffold831	TRF	Tandem_Repeat	111851	111910	93	+	.	.
scaffold831	subtractBed	intrn	114060	114423	.	+	.	Parent=CGI_10010290;
	scaffold831	TRF	Tandem_Repeat	114060	114423	665	+	.	.
scaffold831	subtractBed	intrn	192137	192164	.	-	.	Parent=CGI_10010292;
	scaffold831	TRF	Tandem_Repeat	192137	192164	56	+	.	.
scaffold831	subtractBed	intrn	192162	192204	.	-	.	Parent=CGI_10010292;
	scaffold831	TRF	Tandem_Repeat	192162	192204	86	+	.	.
scaffold833	subtractBed	intrn	130555	132061	.	-	.	Parent=CGI_10016733;
	scaffold833	TRF	Tandem_Repeat	130555	132061	1749	+	.	.
scaffold833	subtractBed	intrn	130555	132061	.	-	.	Parent=CGI_10016733;
	scaffold833	TRF	Tandem_Repeat	130555	132061	1649	+	.	.
scaffold833	subtractBed	intrn	132271	132448	.	-	.	Parent=CGI_10016733;
	scaffold833	TRF	Tandem_Repeat	132271	132448	122	+	.	.
scaffold833	subtractBed	intrn	132238	132457	.	-	.	Parent=CGI_10016733;
	scaffold833	TRF	Tandem_Repeat	132238	132457	114	+	.	.
scaffold833	subtractBed	intrn	196473	196502	.	+	.	Parent=CGI_10016735;
	scaffold833	TRF	Tandem_Repeat	196473	196502	60	+	.	.
scaffold833	subtractBed	intrn	209986	210128	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	209986	210128	116	+	.	.
scaffold833	subtractBed	intrn	210006	210098	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	210006	210098	68	+	.	.
scaffold833	subtractBed	intrn	218942	219042	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	218942	219042	93	+	.	.
scaffold833	subtractBed	intrn	224821	224861	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	224821	224861	82	+	.	.
scaffold833	subtractBed	intrn	225067	225137	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	225067	225137	142	+	.	.
scaffold833	subtractBed	intrn	227046	227267	.	-	.	Parent=CGI_10016736;
	scaffold833	TRF	Tandem_Repeat	227046	227267	408	+	.	.
scaffold833	subtractBed	intrn	296906	297171	.	+	.	Parent=CGI_10016742;
	scaffold833	TRF	Tandem_Repeat	296906	297171	174	+	.	.
scaffold833	subtractBed	intrn	299820	299860	.	+	.	Parent=CGI_10016742;
	scaffold833	TRF	Tandem_Repeat	299820	299860	82	+	.	.
scaffold833	subtractBed	intrn	305741	305778	.	+	.	Parent=CGI_10016743;
	scaffold833	TRF	Tandem_Repeat	305741	305778	76	+	.	.
scaffold833	subtractBed	intrn	351716	351888	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	351716	351888	301	+	.	.
scaffold833	subtractBed	intrn	359104	360168	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359104	360168	170	+	.	.
scaffold833	subtractBed	intrn	359104	359613	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359104	359613	207	+	.	.
scaffold833	subtractBed	intrn	359360	359607	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359360	359607	128	+	.	.
scaffold833	subtractBed	intrn	359118	360202	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359118	360202	304	+	.	.
scaffold833	subtractBed	intrn	359620	359678	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359620	359678	68	+	.	.
scaffold833	subtractBed	intrn	360054	360166	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	360054	360166	65	+	.	.
scaffold833	subtractBed	intrn	360112	360185	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	360112	360185	89	+	.	.
scaffold833	subtractBed	intrn	359850	360192	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	359850	360192	235	+	.	.
scaffold833	subtractBed	intrn	358665	358865	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LINE_L1-Tx1	358665	358865	83	-	.	.
scaffold833	subtractBed	intrn	362155	362204	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	362155	362204	100	+	.	.
scaffold833	subtractBed	intrn	366222	366251	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	366222	366251	51	+	.	.
scaffold833	subtractBed	intrn	372017	372056	.	+	.	Parent=CGI_10016744;
	scaffold833	TRF	Tandem_Repeat	372017	372056	62	+	.	.
scaffold833	subtractBed	intrn	368537	368794	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LTR_Gypsy	368537	368794	24	-	.	.
scaffold833	subtractBed	intrn	368618	370177	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LTR_Gypsy	368618	370177	1023	-	.	.
scaffold833	subtractBed	intrn	369149	370366	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LTR_ERV1	369149	370366	189	-	.	.
scaffold833	subtractBed	intrn	379607	379819	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LINE_Penelope	379607	379819	69	-	.	.
scaffold833	subtractBed	intrn	379595	379774	.	+	.	Parent=CGI_10016744;
	scaffold833	WUBlastX	LINE_Penelope	379595	379774	101	-	.	.
scaffold833	subtractBed	intrn	469283	469317	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	DNA_Academ	469283	469387	24	-	.	.
scaffold833	subtractBed	intrn	467279	467980	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	467279	467980	62	-	.	.
scaffold833	subtractBed	intrn	465344	465853	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	465344	465853	45	-	.	.
scaffold833	subtractBed	intrn	465889	467277	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	465889	467277	592	-	.	.
scaffold833	subtractBed	intrn	467279	467689	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	467279	467689	412	-	.	.
scaffold833	subtractBed	intrn	467906	468598	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	467906	468598	350	-	.	.
scaffold833	subtractBed	intrn	465422	465823	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1-Tx1	465422	465823	82	-	.	.
scaffold833	subtractBed	intrn	467315	467770	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_L1	467315	467770	118	-	.	.
scaffold833	subtractBed	intrn	464279	464843	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	DNA_Academ	463773	464843	264	-	.	.
scaffold833	subtractBed	intrn	465796	465885	.	-	.	Parent=CGI_10016746;
	scaffold833	WUBlastX	LINE_R2	465796	465885	22	-	.	.
scaffold834	subtractBed	intrn	84407	84442	.	+	.	Parent=CGI_10004322;
	scaffold834	TRF	Tandem_Repeat	84407	84442	72	+	.	.
scaffold834	subtractBed	intrn	81618	81956	.	+	.	Parent=CGI_10004322;
	scaffold834	WUBlastX	LINE_RTE-X	81618	81956	76	-	.	.
scaffold835	subtractBed	intrn	4781	4816	.	-	.	Parent=CGI_10016102;
	scaffold835	TRF	Tandem_Repeat	4781	4816	63	+	.	.
scaffold835	subtractBed	intrn	79529	79591	.	-	.	Parent=CGI_10016106;
	scaffold835	TRF	Tandem_Repeat	79529	79591	126	+	.	.
scaffold835	subtractBed	intrn	79982	80053	.	-	.	Parent=CGI_10016106;
	scaffold835	TRF	Tandem_Repeat	79982	80053	96	+	.	.
scaffold835	subtractBed	intrn	85194	86260	.	-	.	Parent=CGI_10016106;
	scaffold835	TRF	Tandem_Repeat	85194	86260	1431	+	.	.
scaffold835	subtractBed	intrn	112759	112814	.	+	.	Parent=CGI_10016108;
	scaffold835	TRF	Tandem_Repeat	112759	112814	112	+	.	.
scaffold835	subtractBed	intrn	112814	112845	.	+	.	Parent=CGI_10016108;
	scaffold835	TRF	Tandem_Repeat	112814	112845	64	+	.	.
scaffold835	subtractBed	intrn	139855	139884	.	-	.	Parent=CGI_10016109;
	scaffold835	TRF	Tandem_Repeat	139855	139884	51	+	.	.
scaffold835	subtractBed	intrn	152968	153146	.	-	.	Parent=CGI_10016109;
	scaffold835	TRF	Tandem_Repeat	152968	153189	313	+	.	.
scaffold835	subtractBed	intrn	177405	177450	.	-	.	Parent=CGI_10016109;
	scaffold835	TRF	Tandem_Repeat	177405	177450	92	+	.	.
scaffold835	subtractBed	intrn	333061	333129	.	-	.	Parent=CGI_10016121;
	scaffold835	TRF	Tandem_Repeat	333061	333129	58	+	.	.
scaffold835	subtractBed	intrn	417116	417163	.	+	.	Parent=CGI_10016122;
	scaffold835	TRF	Tandem_Repeat	417116	417163	96	+	.	.
scaffold835	subtractBed	intrn	417116	417163	.	-	.	Parent=CGI_10016123;
	scaffold835	TRF	Tandem_Repeat	417116	417163	96	+	.	.
scaffold837	subtractBed	intrn	76106	76192	.	-	.	Parent=CGI_10006869;
	scaffold837	TRF	Tandem_Repeat	76106	76192	138	+	.	.
scaffold837	subtractBed	intrn	91328	92225	.	-	.	Parent=CGI_10006870;
	scaffold837	TRF	Tandem_Repeat	91328	92250	1471	+	.	.
scaffold837	subtractBed	intrn	95333	95420	.	-	.	Parent=CGI_10006870;
	scaffold837	TRF	Tandem_Repeat	95333	95420	131	+	.	.
scaffold837	subtractBed	intrn	107124	107367	.	+	.	Parent=CGI_10006871;
	scaffold837	TRF	Tandem_Repeat	107124	107367	142	+	.	.
scaffold837	subtractBed	intrn	111711	111769	.	+	.	Parent=CGI_10006871;
	scaffold837	TRF	Tandem_Repeat	111711	111769	111	+	.	.
scaffold837	subtractBed	intrn	112531	112621	.	+	.	Parent=CGI_10006871;
	scaffold837	TRF	Tandem_Repeat	112531	112621	128	+	.	.
scaffold837	subtractBed	intrn	113197	113495	.	+	.	Parent=CGI_10006871;
	scaffold837	TRF	Tandem_Repeat	113197	113495	291	+	.	.
scaffold837	subtractBed	intrn	124484	124529	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	124484	124529	92	+	.	.
scaffold837	subtractBed	intrn	125507	125616	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	125507	125616	65	+	.	.
scaffold837	subtractBed	intrn	125776	125867	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	125776	125867	72	+	.	.
scaffold837	subtractBed	intrn	126212	126326	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	126212	126326	83	+	.	.
scaffold837	subtractBed	intrn	129775	130464	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	129775	130464	988	+	.	.
scaffold837	subtractBed	intrn	132877	133969	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	132877	133969	1672	+	.	.
scaffold837	subtractBed	intrn	132877	133963	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	132877	133963	1587	+	.	.
scaffold837	subtractBed	intrn	152171	152959	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	152171	152959	1007	+	.	.
scaffold837	subtractBed	intrn	161916	161969	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	161916	161969	63	+	.	.
scaffold837	subtractBed	intrn	161916	161963	.	-	.	Parent=CGI_10006872;
	scaffold837	TRF	Tandem_Repeat	161916	161963	69	+	.	.
scaffold838	subtractBed	intrn	43839	43887	.	-	.	Parent=CGI_10003281;
	scaffold838	TRF	Tandem_Repeat	43839	43887	66	+	.	.
scaffold839	subtractBed	intrn	41547	41784	.	+	.	Parent=CGI_10004335;
	scaffold839	TRF	Tandem_Repeat	41547	41784	383	+	.	.
scaffold839	subtractBed	intrn	42256	42308	.	+	.	Parent=CGI_10004335;
	scaffold839	TRF	Tandem_Repeat	42256	42308	106	+	.	.
scaffold839	subtractBed	intrn	81795	81833	.	-	.	Parent=CGI_10004337;
	scaffold839	TRF	Tandem_Repeat	81795	81833	78	+	.	.
scaffold839	subtractBed	intrn	83778	84014	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1-Tx1	83778	84014	53	-	.	.
scaffold839	subtractBed	intrn	86449	86703	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1	86449	86703	104	-	.	.
scaffold839	subtractBed	intrn	86311	86733	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1	86311	86733	56	-	.	.
scaffold839	subtractBed	intrn	84118	85494	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1-Tx1	84118	85494	666	-	.	.
scaffold839	subtractBed	intrn	86717	87676	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1-Tx1	86717	87676	185	-	.	.
scaffold839	subtractBed	intrn	83778	84098	.	-	.	Parent=CGI_10004337;
	scaffold839	WUBlastX	LINE_L1-Tx1	83778	84098	20	-	.	.
scaffold841	subtractBed	intrn	16064	16150	.	-	.	Parent=CGI_10001583;
	scaffold841	TRF	Tandem_Repeat	16064	16150	59	+	.	.
scaffold841	subtractBed	intrn	20038	20087	.	-	.	Parent=CGI_10001583;
	scaffold841	TRF	Tandem_Repeat	20038	20087	100	+	.	.
scaffold847	subtractBed	intrn	65237	65305	.	-	.	Parent=CGI_10022265;
	scaffold847	WUBlastX	LTR_Gypsy	65237	65305	25	-	.	.
scaffold847	subtractBed	intrn	65259	65522	.	-	.	Parent=CGI_10022265;
	scaffold847	WUBlastX	LTR_Gypsy	65259	65522	69	-	.	.
scaffold847	subtractBed	intrn	65295	65495	.	-	.	Parent=CGI_10022265;
	scaffold847	WUBlastX	LTR_Gypsy	65295	65495	97	-	.	.
scaffold847	subtractBed	intrn	81965	82043	.	-	.	Parent=CGI_10022267;
	scaffold847	TRF	Tandem_Repeat	81965	82043	158	+	.	.
scaffold847	subtractBed	intrn	239954	239991	.	+	.	Parent=CGI_10022269;
	scaffold847	TRF	Tandem_Repeat	239954	239991	76	+	.	.
scaffold847	subtractBed	intrn	239991	240027	.	+	.	Parent=CGI_10022269;
	scaffold847	TRF	Tandem_Repeat	239991	240027	65	+	.	.
scaffold847	subtractBed	intrn	244126	244164	.	+	.	Parent=CGI_10022269;
	scaffold847	TRF	Tandem_Repeat	244126	244164	78	+	.	.
scaffold847	subtractBed	intrn	249149	249188	.	+	.	Parent=CGI_10022269;
	scaffold847	TRF	Tandem_Repeat	249149	249188	53	+	.	.
scaffold847	subtractBed	intrn	249157	249191	.	+	.	Parent=CGI_10022269;
	scaffold847	TRF	Tandem_Repeat	249157	249191	52	+	.	.
scaffold847	subtractBed	intrn	281236	281631	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	281236	281631	161	-	.	.
scaffold847	subtractBed	intrn	281798	282160	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	281798	282160	108	-	.	.
scaffold847	subtractBed	intrn	281696	282052	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	281696	282052	102	-	.	.
scaffold847	subtractBed	intrn	279310	280368	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LTR_Pao	279310	280368	155	-	.	.
scaffold847	subtractBed	intrn	281182	281667	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	281182	281667	151	-	.	.
scaffold847	subtractBed	intrn	281693	282259	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	281693	282259	67	-	.	.
scaffold847	subtractBed	intrn	282126	282344	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LINE_RTE-X	282126	282344	64	-	.	.
scaffold847	subtractBed	intrn	277741	280167	.	-	.	Parent=CGI_10022270;
	scaffold847	WUBlastX	LTR_Pao	277741	280167	1935	-	.	.
scaffold847	subtractBed	intrn	289368	289397	.	-	.	Parent=CGI_10022271;
	scaffold847	TRF	Tandem_Repeat	289368	289397	60	+	.	.
scaffold847	subtractBed	intrn	313010	313069	.	+	.	Parent=CGI_10022272;
	scaffold847	TRF	Tandem_Repeat	313010	313069	93	+	.	.
scaffold847	subtractBed	intrn	349513	349845	.	+	.	Parent=CGI_10022273;
	scaffold847	TRF	Tandem_Repeat	349513	349845	440	+	.	.
scaffold847	subtractBed	intrn	353113	353771	.	+	.	Parent=CGI_10022273;
	scaffold847	TRF	Tandem_Repeat	353113	353771	933	+	.	.
scaffold847	subtractBed	intrn	378079	378131	.	+	.	Parent=CGI_10022274;
	scaffold847	TRF	Tandem_Repeat	378079	378131	106	+	.	.
scaffold847	subtractBed	intrn	409838	410159	.	-	.	Parent=CGI_10022277;
	scaffold847	TRF	Tandem_Repeat	409838	410159	574	+	.	.
scaffold847	subtractBed	intrn	436989	437846	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	436989	437846	97	-	.	.
scaffold847	subtractBed	intrn	438743	439180	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	438743	439180	63	-	.	.
scaffold847	subtractBed	intrn	436670	436882	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	436670	436882	58	-	.	.
scaffold847	subtractBed	intrn	437364	437846	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	437364	437846	168	-	.	.
scaffold847	subtractBed	intrn	439398	439457	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	439398	439457	20	-	.	.
scaffold847	subtractBed	intrn	437219	437503	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	437219	437503	109	-	.	.
scaffold847	subtractBed	intrn	437499	437846	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	437499	437846	210	-	.	.
scaffold847	subtractBed	intrn	437852	438349	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	437852	438349	316	-	.	.
scaffold847	subtractBed	intrn	438355	438774	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	438355	438774	50	-	.	.
scaffold847	subtractBed	intrn	438743	439114	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	438743	439114	118	-	.	.
scaffold847	subtractBed	intrn	438746	438952	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	438746	438952	131	-	.	.
scaffold847	subtractBed	intrn	436649	436933	.	+	.	Parent=CGI_10022278;
	scaffold847	WUBlastX	RC_Helitron	436649	436933	21	-	.	.
scaffold847	subtractBed	intrn	511809	512111	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	511809	512111	79	-	.	.
scaffold847	subtractBed	intrn	509286	510176	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	509286	510176	147	-	.	.
scaffold847	subtractBed	intrn	511905	512156	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	511905	512156	61	-	.	.
scaffold847	subtractBed	intrn	509286	509549	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	509286	509549	189	-	.	.
scaffold847	subtractBed	intrn	510163	511344	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	510163	511344	720	-	.	.
scaffold847	subtractBed	intrn	511355	511729	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	511355	511729	211	-	.	.
scaffold847	subtractBed	intrn	511358	511894	.	-	.	Parent=CGI_10022280;
	scaffold847	WUBlastX	LTR_DIRS	511358	511894	163	-	.	.
scaffold847	subtractBed	intrn	520646	521950	.	+	.	Parent=CGI_10022281;
	scaffold847	WUBlastX	LINE_L2	520646	521950	806	+	.	.
scaffold847	subtractBed	intrn	520355	521947	.	+	.	Parent=CGI_10022281;
	scaffold847	WUBlastX	LINE_L2	520355	521947	247	+	.	.
scaffold847	subtractBed	intrn	554735	554792	.	+	.	Parent=CGI_10022282;
	scaffold847	TRF	Tandem_Repeat	554735	554792	82	+	.	.
scaffold847	subtractBed	intrn	554735	554792	.	+	.	Parent=CGI_10022282;
	scaffold847	TRF	Tandem_Repeat	554735	554792	82	+	.	.
scaffold847	subtractBed	intrn	554747	554792	.	+	.	Parent=CGI_10022282;
	scaffold847	TRF	Tandem_Repeat	554747	554792	56	+	.	.
scaffold847	subtractBed	intrn	598114	598150	.	-	.	Parent=CGI_10022283;
	scaffold847	TRF	Tandem_Repeat	598114	598150	65	+	.	.
scaffold847	subtractBed	intrn	600634	600710	.	-	.	Parent=CGI_10022283;
	scaffold847	TRF	Tandem_Repeat	600634	600710	145	+	.	.
scaffold847	subtractBed	intrn	597422	598033	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597422	598033	203	-	.	.
scaffold847	subtractBed	intrn	598299	598664	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	598299	598664	57	-	.	.
scaffold847	subtractBed	intrn	597366	597509	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597366	597509	41	-	.	.
scaffold847	subtractBed	intrn	598536	598691	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	598536	598691	21	-	.	.
scaffold847	subtractBed	intrn	597271	597369	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597271	597369	38	-	.	.
scaffold847	subtractBed	intrn	598031	598108	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	598031	598108	28	-	.	.
scaffold847	subtractBed	intrn	597713	598096	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597713	598096	128	-	.	.
scaffold847	subtractBed	intrn	597521	598033	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597521	598033	206	-	.	.
scaffold847	subtractBed	intrn	597710	598033	.	-	.	Parent=CGI_10022283;
	scaffold847	WUBlastX	LTR_Gypsy	597710	598033	266	-	.	.
scaffold847	subtractBed	intrn	602938	602973	.	-	.	Parent=CGI_10022283;
	scaffold847	TRF	Tandem_Repeat	602938	602973	63	+	.	.
scaffold847	subtractBed	intrn	617030	617086	.	-	.	Parent=CGI_10022284;
	scaffold847	TRF	Tandem_Repeat	617030	617086	114	+	.	.
scaffold847	subtractBed	intrn	707407	707559	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1-Tx1	707407	707559	51	-	.	.
scaffold847	subtractBed	intrn	706056	706475	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1-Tx1	706056	706475	116	-	.	.
scaffold847	subtractBed	intrn	707577	707807	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1-Tx1	707577	707807	89	-	.	.
scaffold847	subtractBed	intrn	705725	706129	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1	705725	706129	100	-	.	.
scaffold847	subtractBed	intrn	706496	707272	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1	706496	707272	78	-	.	.
scaffold847	subtractBed	intrn	705578	706153	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1-Tx1	705578	706153	30	-	.	.
scaffold847	subtractBed	intrn	706104	706454	.	-	.	Parent=CGI_10022288;
	scaffold847	WUBlastX	LINE_L1	706104	706454	157	-	.	.
scaffold847	subtractBed	intrn	730932	731397	.	+	.	Parent=CGI_10022291;
	scaffold847	TRF	Tandem_Repeat	730932	731397	717	+	.	.
scaffold85	subtractBed	intrn	20776	20841	.	+	.	Parent=CGI_10020689;
	scaffold85	TRF	Tandem_Repeat	20776	20841	132	+	.	.
scaffold85	subtractBed	intrn	39677	40801	.	+	.	Parent=CGI_10020690;
	scaffold85	TRF	Tandem_Repeat	39677	40801	1525	+	.	.
scaffold85	subtractBed	intrn	41729	41897	.	+	.	Parent=CGI_10020690;
	scaffold85	TRF	Tandem_Repeat	41729	41897	252	+	.	.
scaffold85	subtractBed	intrn	41823	41912	.	+	.	Parent=CGI_10020690;
	scaffold85	TRF	Tandem_Repeat	41823	41912	69	+	.	.
scaffold85	subtractBed	intrn	41898	43246	.	+	.	Parent=CGI_10020690;
	scaffold85	TRF	Tandem_Repeat	41898	43246	1426	+	.	.
scaffold85	subtractBed	intrn	48118	48162	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	48118	48162	90	+	.	.
scaffold85	subtractBed	intrn	59299	59344	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	59299	59344	56	+	.	.
scaffold85	subtractBed	intrn	61014	61073	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	61014	61073	57	+	.	.
scaffold85	subtractBed	intrn	61831	62616	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	61831	62616	408	+	.	.
scaffold85	subtractBed	intrn	61871	62623	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	61871	62623	772	+	.	.
scaffold85	subtractBed	intrn	61963	62623	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	61963	62623	748	+	.	.
scaffold85	subtractBed	intrn	64706	64856	.	-	.	Parent=CGI_10020691;
	scaffold85	TRF	Tandem_Repeat	64706	64863	133	+	.	.
scaffold85	subtractBed	intrn	69600	69696	.	+	.	Parent=CGI_10020692;
	scaffold85	TRF	Tandem_Repeat	69600	69696	104	+	.	.
scaffold85	subtractBed	intrn	91460	91719	.	-	.	Parent=CGI_10020694;
	scaffold85	TRF	Tandem_Repeat	91460	91719	195	+	.	.
scaffold85	subtractBed	intrn	91754	92049	.	-	.	Parent=CGI_10020694;
	scaffold85	TRF	Tandem_Repeat	91754	92049	556	+	.	.
scaffold85	subtractBed	intrn	92023	92141	.	-	.	Parent=CGI_10020694;
	scaffold85	TRF	Tandem_Repeat	92023	92141	118	+	.	.
scaffold85	subtractBed	intrn	94510	94548	.	-	.	Parent=CGI_10020694;
	scaffold85	TRF	Tandem_Repeat	94510	94548	78	+	.	.
scaffold85	subtractBed	intrn	96219	96259	.	-	.	Parent=CGI_10020694;
	scaffold85	TRF	Tandem_Repeat	96219	96259	82	+	.	.
scaffold85	subtractBed	intrn	119626	119658	.	-	.	Parent=CGI_10020695;
	scaffold85	TRF	Tandem_Repeat	119626	119658	57	+	.	.
scaffold85	subtractBed	intrn	142960	143007	.	-	.	Parent=CGI_10020696;
	scaffold85	TRF	Tandem_Repeat	142960	143007	96	+	.	.
scaffold85	subtractBed	intrn	146777	146827	.	-	.	Parent=CGI_10020696;
	scaffold85	TRF	Tandem_Repeat	146777	146827	102	+	.	.
scaffold85	subtractBed	intrn	147427	147457	.	-	.	Parent=CGI_10020696;
	scaffold85	TRF	Tandem_Repeat	147427	147457	62	+	.	.
scaffold85	subtractBed	intrn	215579	215609	.	-	.	Parent=CGI_10020698;
	scaffold85	TRF	Tandem_Repeat	215579	215609	53	+	.	.
scaffold85	subtractBed	intrn	220697	220729	.	-	.	Parent=CGI_10020698;
	scaffold85	TRF	Tandem_Repeat	220697	220729	66	+	.	.
scaffold85	subtractBed	intrn	236396	236448	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	236396	236448	106	+	.	.
scaffold85	subtractBed	intrn	236503	236555	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	236503	236555	65	+	.	.
scaffold85	subtractBed	intrn	241939	242005	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	241939	242005	89	+	.	.
scaffold85	subtractBed	intrn	242496	242529	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	242496	242529	68	+	.	.
scaffold85	subtractBed	intrn	242527	242559	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	242527	242559	66	+	.	.
scaffold85	subtractBed	intrn	242747	242795	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	242747	242795	98	+	.	.
scaffold85	subtractBed	intrn	245184	245250	.	+	.	Parent=CGI_10020700;
	scaffold85	TRF	Tandem_Repeat	245184	245250	80	+	.	.
scaffold85	subtractBed	intrn	264343	264701	.	+	.	Parent=CGI_10020701;
	scaffold85	TRF	Tandem_Repeat	264343	264701	517	+	.	.
scaffold85	subtractBed	intrn	264491	264602	.	+	.	Parent=CGI_10020701;
	scaffold85	TRF	Tandem_Repeat	264491	264602	71	+	.	.
scaffold85	subtractBed	intrn	272805	272961	.	+	.	Parent=CGI_10020701;
	scaffold85	TRF	Tandem_Repeat	272805	272961	99	+	.	.
scaffold85	subtractBed	intrn	353334	354164	.	-	.	Parent=CGI_10020703;
	scaffold85	WUBlastX	LTR_Gypsy-Cigr	353334	354164	646	-	.	.
scaffold85	subtractBed	intrn	351874	353313	.	-	.	Parent=CGI_10020703;
	scaffold85	WUBlastX	LTR_Gypsy-Cigr	351874	353313	809	-	.	.
scaffold85	subtractBed	intrn	353439	354350	.	-	.	Parent=CGI_10020703;
	scaffold85	WUBlastX	LTR_Gypsy	353439	354350	335	-	.	.
scaffold85	subtractBed	intrn	354345	354545	.	-	.	Parent=CGI_10020703;
	scaffold85	WUBlastX	LTR_Gypsy	354345	354545	31	-	.	.
scaffold85	subtractBed	intrn	390606	390677	.	+	.	Parent=CGI_10020705;
	scaffold85	WUBlastX	DNA_Kolobok-Hyd	390273	390677	28	+	.	.
scaffold85	subtractBed	intrn	457966	458051	.	+	.	Parent=CGI_10020708;
	scaffold85	TRF	Tandem_Repeat	457966	458051	57	+	.	.
scaffold85	subtractBed	intrn	460681	460715	.	+	.	Parent=CGI_10020708;
	scaffold85	TRF	Tandem_Repeat	460681	460715	61	+	.	.
scaffold85	subtractBed	intrn	480974	481015	.	-	.	Parent=CGI_10020709;
	scaffold85	TRF	Tandem_Repeat	480974	481015	84	+	.	.
scaffold85	subtractBed	intrn	535337	535434	.	-	.	Parent=CGI_10020711;
	scaffold85	TRF	Tandem_Repeat	535337	535434	124	+	.	.
scaffold85	subtractBed	intrn	543873	543934	.	+	.	Parent=CGI_10020712;
	scaffold85	TRF	Tandem_Repeat	543873	543934	124	+	.	.
scaffold85	subtractBed	intrn	553035	553308	.	-	.	Parent=CGI_10020713;
	scaffold85	TRF	Tandem_Repeat	553035	553323	330	+	.	.
scaffold85	subtractBed	intrn	596436	596627	.	-	.	Parent=CGI_10020717;
	scaffold85	TRF	Tandem_Repeat	596436	596627	186	+	.	.
scaffold85	subtractBed	intrn	619470	619494	.	-	.	Parent=CGI_10020719;
	scaffold85	TRF	Tandem_Repeat	619470	619494	50	+	.	.
scaffold85	subtractBed	intrn	617470	618390	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LINE_L2	617470	618390	563	-	.	.
scaffold85	subtractBed	intrn	616593	617498	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LINE_L2	616593	617498	397	-	.	.
scaffold85	subtractBed	intrn	622680	622967	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LINE_RTE-X	622680	622967	40	+	.	.
scaffold85	subtractBed	intrn	623354	623388	.	-	.	Parent=CGI_10020719;
	scaffold85	TRF	Tandem_Repeat	623354	623388	61	+	.	.
scaffold85	subtractBed	intrn	634497	635528	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LTR_Gypsy	634497	635528	127	-	.	.
scaffold85	subtractBed	intrn	634689	636224	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LTR_Gypsy	634689	636224	51	-	.	.
scaffold85	subtractBed	intrn	635274	635873	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LTR_Gypsy-Cigr	635274	635873	194	-	.	.
scaffold85	subtractBed	intrn	635280	635756	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LTR_Gypsy-Cigr	635280	635756	197	-	.	.
scaffold85	subtractBed	intrn	634956	635927	.	-	.	Parent=CGI_10020719;
	scaffold85	WUBlastX	LTR_Gypsy	634956	635927	187	-	.	.
scaffold850	subtractBed	intrn	9300	10018	.	-	.	Parent=CGI_10011232;
	scaffold850	TRF	Tandem_Repeat	9300	10018	490	+	.	.
scaffold850	subtractBed	intrn	9415	9545	.	-	.	Parent=CGI_10011232;
	scaffold850	TRF	Tandem_Repeat	9415	9545	109	+	.	.
scaffold850	subtractBed	intrn	9427	10014	.	-	.	Parent=CGI_10011232;
	scaffold850	TRF	Tandem_Repeat	9427	10014	366	+	.	.
scaffold850	subtractBed	intrn	9528	10013	.	-	.	Parent=CGI_10011232;
	scaffold850	TRF	Tandem_Repeat	9528	10013	336	+	.	.
scaffold850	subtractBed	intrn	49081	49148	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	49081	49148	127	+	.	.
scaffold850	subtractBed	intrn	50989	51320	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	50989	51320	284	+	.	.
scaffold850	subtractBed	intrn	52587	53085	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	52587	53085	349	+	.	.
scaffold850	subtractBed	intrn	52561	53094	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	52561	53094	650	+	.	.
scaffold850	subtractBed	intrn	52634	53094	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	52634	53094	590	+	.	.
scaffold850	subtractBed	intrn	53266	53639	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	53207	53639	435	+	.	.
scaffold850	subtractBed	intrn	54493	54532	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	54493	54532	80	+	.	.
scaffold850	subtractBed	intrn	64960	65007	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	64960	65007	87	+	.	.
scaffold850	subtractBed	intrn	67599	67655	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	67599	67655	114	+	.	.
scaffold850	subtractBed	intrn	70615	70650	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	70615	70650	65	+	.	.
scaffold850	subtractBed	intrn	70866	71199	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	70866	71199	342	+	.	.
scaffold850	subtractBed	intrn	70883	71243	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	70883	71248	313	+	.	.
scaffold850	subtractBed	intrn	70896	71243	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	70896	71246	384	+	.	.
scaffold850	subtractBed	intrn	71122	71216	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	71122	71216	76	+	.	.
scaffold850	subtractBed	intrn	70956	71243	.	-	.	Parent=CGI_10011234;
	scaffold850	TRF	Tandem_Repeat	70956	71248	160	+	.	.
scaffold850	subtractBed	intrn	84097	84164	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	84097	84164	127	+	.	.
scaffold850	subtractBed	intrn	85723	86075	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	85723	86075	472	+	.	.
scaffold850	subtractBed	intrn	85723	86075	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	85723	86075	490	+	.	.
scaffold850	subtractBed	intrn	90067	90441	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	90067	90441	464	+	.	.
scaffold850	subtractBed	intrn	90516	90966	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	90516	90966	875	+	.	.
scaffold850	subtractBed	intrn	91104	91170	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	91104	91170	71	+	.	.
scaffold850	subtractBed	intrn	95579	95636	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	95579	95636	53	+	.	.
scaffold850	subtractBed	intrn	95592	95660	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	95592	95660	84	+	.	.
scaffold850	subtractBed	intrn	98576	98829	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	98540	98829	285	+	.	.
scaffold850	subtractBed	intrn	98867	99580	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	98867	99580	531	+	.	.
scaffold850	subtractBed	intrn	109991	110045	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	109991	110045	110	+	.	.
scaffold850	subtractBed	intrn	110997	111227	.	+	.	Parent=CGI_10011236;
	scaffold850	TRF	Tandem_Repeat	110997	111227	320	+	.	.
scaffold850	subtractBed	intrn	115241	115295	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	115241	115295	85	+	.	.
scaffold850	subtractBed	intrn	115242	115298	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	115242	115298	62	+	.	.
scaffold850	subtractBed	intrn	115248	115298	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	115248	115298	75	+	.	.
scaffold850	subtractBed	intrn	116322	117414	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	116322	117414	1570	+	.	.
scaffold850	subtractBed	intrn	118008	118083	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	118008	118083	98	+	.	.
scaffold850	subtractBed	intrn	118008	118083	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	118008	118083	80	+	.	.
scaffold850	subtractBed	intrn	119721	120134	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	119712	120134	609	+	.	.
scaffold850	subtractBed	intrn	124127	124624	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	124127	124624	761	+	.	.
scaffold850	subtractBed	intrn	126393	126704	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	126393	126704	293	+	.	.
scaffold850	subtractBed	intrn	127103	127292	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	127103	127292	96	+	.	.
scaffold850	subtractBed	intrn	127115	127252	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	127115	127252	112	+	.	.
scaffold850	subtractBed	intrn	127262	127294	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	127262	127294	66	+	.	.
scaffold850	subtractBed	intrn	128952	130457	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	128928	130457	2386	+	.	.
scaffold850	subtractBed	intrn	131903	132025	.	+	.	Parent=CGI_10011237;
	scaffold850	TRF	Tandem_Repeat	131903	132025	93	+	.	.
scaffold850	subtractBed	intrn	139812	139847	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	139812	139847	72	+	.	.
scaffold850	subtractBed	intrn	142948	143086	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	142948	143086	111	+	.	.
scaffold850	subtractBed	intrn	142935	143108	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	142935	143108	156	+	.	.
scaffold850	subtractBed	intrn	148763	148810	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	148763	148810	78	+	.	.
scaffold850	subtractBed	intrn	152226	152525	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	152226	152525	501	+	.	.
scaffold850	subtractBed	intrn	154331	154357	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	154331	154357	54	+	.	.
scaffold850	subtractBed	intrn	155037	155080	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	155037	155080	88	+	.	.
scaffold850	subtractBed	intrn	155439	155485	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	155439	155485	94	+	.	.
scaffold850	subtractBed	intrn	157153	157178	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	157153	157178	52	+	.	.
scaffold850	subtractBed	intrn	157484	157789	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	157484	157789	336	+	.	.
scaffold850	subtractBed	intrn	158392	158422	.	-	.	Parent=CGI_10011239;
	scaffold850	TRF	Tandem_Repeat	158392	158422	62	+	.	.
scaffold850	subtractBed	intrn	173203	173351	.	+	.	Parent=CGI_10011242;
	scaffold850	TRF	Tandem_Repeat	173203	173351	165	+	.	.
scaffold850	subtractBed	intrn	173197	173351	.	+	.	Parent=CGI_10011242;
	scaffold850	TRF	Tandem_Repeat	173197	173351	229	+	.	.
scaffold850	subtractBed	intrn	173203	173377	.	+	.	Parent=CGI_10011242;
	scaffold850	TRF	Tandem_Repeat	173203	173377	163	+	.	.
scaffold850	subtractBed	intrn	196651	196929	.	+	.	Parent=CGI_10011243;
	scaffold850	TRF	Tandem_Repeat	196651	196929	540	+	.	.
scaffold850	subtractBed	intrn	208149	208363	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	208149	208363	334	+	.	.
scaffold850	subtractBed	intrn	208149	208385	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	208149	208385	339	+	.	.
scaffold850	subtractBed	intrn	208880	209130	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	208880	209130	403	+	.	.
scaffold850	subtractBed	intrn	209200	209318	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	209200	209318	94	+	.	.
scaffold850	subtractBed	intrn	209189	209300	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	209189	209300	206	+	.	.
scaffold850	subtractBed	intrn	209626	209655	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	209626	209655	60	+	.	.
scaffold850	subtractBed	intrn	215712	215747	.	+	.	Parent=CGI_10011244;
	scaffold850	TRF	Tandem_Repeat	215712	215747	72	+	.	.
scaffold850	subtractBed	intrn	257211	257265	.	-	.	Parent=CGI_10011247;
	scaffold850	TRF	Tandem_Repeat	257211	257265	110	+	.	.
scaffold850	subtractBed	intrn	278684	280409	.	-	.	Parent=CGI_10011247;
	scaffold850	TRF	Tandem_Repeat	278684	280409	1918	+	.	.
scaffold852	subtractBed	intrn	46350	46389	.	+	.	Parent=CGI_10012033;
	scaffold852	TRF	Tandem_Repeat	46350	46389	71	+	.	.
scaffold852	subtractBed	intrn	51471	51782	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	51471	51782	59	-	.	.
scaffold852	subtractBed	intrn	51859	51927	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	51859	51927	34	-	.	.
scaffold852	subtractBed	intrn	52009	52047	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	52009	52047	22	-	.	.
scaffold852	subtractBed	intrn	52515	52598	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	52515	52598	54	-	.	.
scaffold852	subtractBed	intrn	51841	51924	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	51841	51924	27	-	.	.
scaffold852	subtractBed	intrn	52202	52348	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	52202	52348	23	-	.	.
scaffold852	subtractBed	intrn	51537	51707	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_IS4EU	51537	51707	74	-	.	.
scaffold852	subtractBed	intrn	52443	52595	.	-	.	Parent=CGI_10012034;
	scaffold852	WUBlastX	DNA_Kolobok-IS4	52443	52595	20	-	.	.
scaffold852	subtractBed	intrn	66717	69767	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Gypsy-Cigr	66717	69767	2144	-	.	.
scaffold852	subtractBed	intrn	70439	71233	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Gypsy	70439	71233	76	-	.	.
scaffold852	subtractBed	intrn	66714	70346	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Gypsy	66714	70346	1793	-	.	.
scaffold852	subtractBed	intrn	66624	67109	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Gypsy	66624	67109	27	-	.	.
scaffold852	subtractBed	intrn	70439	71098	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Gypsy-Cigr	70439	71098	209	-	.	.
scaffold852	subtractBed	intrn	70349	70744	.	+	.	Parent=CGI_10012036;
	scaffold852	WUBlastX	LTR_Copia	70349	70744	67	-	.	.
scaffold852	subtractBed	intrn	90073	90119	.	+	.	Parent=CGI_10012037;
	scaffold852	TRF	Tandem_Repeat	90073	90119	94	+	.	.
scaffold852	subtractBed	intrn	90525	90592	.	+	.	Parent=CGI_10012037;
	scaffold852	TRF	Tandem_Repeat	90525	90592	136	+	.	.
scaffold852	subtractBed	intrn	91207	91234	.	+	.	Parent=CGI_10012037;
	scaffold852	TRF	Tandem_Repeat	91207	91234	56	+	.	.
scaffold852	subtractBed	intrn	125447	125488	.	+	.	Parent=CGI_10012039;
	scaffold852	TRF	Tandem_Repeat	125447	125488	77	+	.	.
scaffold852	subtractBed	intrn	121898	122167	.	+	.	Parent=CGI_10012039;
	scaffold852	WUBlastX	DNA_Merlin	121898	122167	47	+	.	.
scaffold852	subtractBed	intrn	127389	127541	.	+	.	Parent=CGI_10012039;
	scaffold852	WUBlastX	DNA_IS4EU	127389	127541	52	+	.	.
scaffold852	subtractBed	intrn	126817	127212	.	+	.	Parent=CGI_10012039;
	scaffold852	WUBlastX	DNA_IS4EU	126817	127212	90	+	.	.
scaffold852	subtractBed	intrn	126724	127212	.	+	.	Parent=CGI_10012039;
	scaffold852	WUBlastX	DNA_Kolobok-IS4	126724	127212	83	+	.	.
scaffold852	subtractBed	intrn	158244	158339	.	+	.	Parent=CGI_10012040;
	scaffold852	TRF	Tandem_Repeat	158244	158339	192	+	.	.
scaffold852	subtractBed	intrn	164877	165027	.	+	.	Parent=CGI_10012040;
	scaffold852	TRF	Tandem_Repeat	164877	165027	178	+	.	.
scaffold852	subtractBed	intrn	166546	166595	.	+	.	Parent=CGI_10012040;
	scaffold852	TRF	Tandem_Repeat	166546	166595	82	+	.	.
scaffold852	subtractBed	intrn	170504	170617	.	+	.	Parent=CGI_10012040;
	scaffold852	TRF	Tandem_Repeat	170504	170617	126	+	.	.
scaffold852	subtractBed	intrn	170711	170890	.	+	.	Parent=CGI_10012040;
	scaffold852	TRF	Tandem_Repeat	170711	170890	135	+	.	.
scaffold852	subtractBed	intrn	169586	170152	.	+	.	Parent=CGI_10012040;
	scaffold852	WUBlastX	LTR_Ngaro	169586	170152	172	-	.	.
scaffold852	subtractBed	intrn	240305	240665	.	+	.	Parent=CGI_10012043;
	scaffold852	TRF	Tandem_Repeat	240305	240665	652	+	.	.
scaffold852	subtractBed	intrn	249310	249350	.	+	.	Parent=CGI_10012043;
	scaffold852	TRF	Tandem_Repeat	249310	249350	82	+	.	.
scaffold852	subtractBed	intrn	250633	251262	.	+	.	Parent=CGI_10012043;
	scaffold852	TRF	Tandem_Repeat	250633	251262	864	+	.	.
scaffold852	subtractBed	intrn	250639	251257	.	+	.	Parent=CGI_10012043;
	scaffold852	TRF	Tandem_Repeat	250639	251257	829	+	.	.
scaffold852	subtractBed	intrn	252441	254099	.	+	.	Parent=CGI_10012043;
	scaffold852	TRF	Tandem_Repeat	252441	254099	1975	+	.	.
scaffold852	subtractBed	intrn	275658	275711	.	+	.	Parent=CGI_10012044;
	scaffold852	TRF	Tandem_Repeat	275658	275711	108	+	.	.
scaffold853	subtractBed	intrn	8210	8244	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	8210	8244	54	+	.	.
scaffold853	subtractBed	intrn	9700	10146	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	9700	10146	602	+	.	.
scaffold853	subtractBed	intrn	10252	10307	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	10252	10307	112	+	.	.
scaffold853	subtractBed	intrn	11477	11530	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	11477	11530	108	+	.	.
scaffold853	subtractBed	intrn	13936	14097	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	13936	14097	270	+	.	.
scaffold853	subtractBed	intrn	19429	19473	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	19429	19473	56	+	.	.
scaffold853	subtractBed	intrn	23545	24288	.	-	.	Parent=CGI_10017479;
	scaffold853	TRF	Tandem_Repeat	23545	24288	1123	+	.	.
scaffold853	subtractBed	intrn	63345	64047	.	-	.	Parent=CGI_10017482;
	scaffold853	TRF	Tandem_Repeat	63345	64047	1080	+	.	.
scaffold853	subtractBed	intrn	149036	149097	.	+	.	Parent=CGI_10017491;
	scaffold853	TRF	Tandem_Repeat	149036	149097	81	+	.	.
scaffold853	subtractBed	intrn	168471	168501	.	+	.	Parent=CGI_10017491;
	scaffold853	TRF	Tandem_Repeat	168471	168501	62	+	.	.
scaffold853	subtractBed	intrn	188757	188799	.	-	.	Parent=CGI_10017493;
	scaffold853	TRF	Tandem_Repeat	188757	188799	68	+	.	.
scaffold853	subtractBed	intrn	207148	207302	.	-	.	Parent=CGI_10017494;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	206913	207302	29	+	.	.
scaffold853	subtractBed	intrn	207148	207149	.	-	.	Parent=CGI_10017494;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	206865	207149	30	+	.	.
scaffold853	subtractBed	intrn	208049	208055	.	-	.	Parent=CGI_10017494;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	208049	208345	31	+	.	.
scaffold853	subtractBed	intrn	207883	207890	.	-	.	Parent=CGI_10017494;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	207816	207890	42	+	.	.
scaffold853	subtractBed	intrn	208265	208345	.	-	.	Parent=CGI_10017494;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	208049	208345	31	+	.	.
scaffold853	subtractBed	intrn	207148	207302	.	+	.	Parent=CGI_10017495;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	206913	207302	29	+	.	.
scaffold853	subtractBed	intrn	207148	207149	.	+	.	Parent=CGI_10017495;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	206865	207149	30	+	.	.
scaffold853	subtractBed	intrn	208049	208055	.	+	.	Parent=CGI_10017495;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	208049	208345	31	+	.	.
scaffold853	subtractBed	intrn	207883	207890	.	+	.	Parent=CGI_10017495;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	207816	207890	42	+	.	.
scaffold853	subtractBed	intrn	208265	208345	.	+	.	Parent=CGI_10017495;
	scaffold853	WUBlastX	DNA_Kolobok-Hyd	208049	208345	31	+	.	.
scaffold853	subtractBed	intrn	217442	218236	.	+	.	Parent=CGI_10017496;
	scaffold853	TRF	Tandem_Repeat	217442	218236	967	+	.	.
scaffold853	subtractBed	intrn	219242	219371	.	+	.	Parent=CGI_10017496;
	scaffold853	TRF	Tandem_Repeat	219242	219371	57	+	.	.
scaffold853	subtractBed	intrn	224939	224970	.	+	.	Parent=CGI_10017496;
	scaffold853	TRF	Tandem_Repeat	224939	224970	64	+	.	.
scaffold853	subtractBed	intrn	217442	218236	.	-	.	Parent=CGI_10017497;
	scaffold853	TRF	Tandem_Repeat	217442	218236	967	+	.	.
scaffold853	subtractBed	intrn	219242	219371	.	-	.	Parent=CGI_10017497;
	scaffold853	TRF	Tandem_Repeat	219242	219371	57	+	.	.
scaffold853	subtractBed	intrn	224939	224970	.	-	.	Parent=CGI_10017497;
	scaffold853	TRF	Tandem_Repeat	224939	224970	64	+	.	.
scaffold853	subtractBed	intrn	229300	229596	.	+	.	Parent=CGI_10017498;
	scaffold853	WUBlastX	LINE_RTE-X	229300	229596	105	-	.	.
scaffold853	subtractBed	intrn	237645	237710	.	+	.	Parent=CGI_10017498;
	scaffold853	TRF	Tandem_Repeat	237645	237710	78	+	.	.
scaffold853	subtractBed	intrn	237645	237709	.	+	.	Parent=CGI_10017498;
	scaffold853	TRF	Tandem_Repeat	237645	237709	100	+	.	.
scaffold853	subtractBed	intrn	237645	237710	.	+	.	Parent=CGI_10017498;
	scaffold853	TRF	Tandem_Repeat	237645	237710	84	+	.	.
scaffold853	subtractBed	intrn	245748	245796	.	+	.	Parent=CGI_10017500;
	scaffold853	TRF	Tandem_Repeat	245748	245796	98	+	.	.
scaffold853	subtractBed	intrn	291439	291472	.	-	.	Parent=CGI_10017503;
	scaffold853	TRF	Tandem_Repeat	291439	291472	68	+	.	.
scaffold853	subtractBed	intrn	345666	345763	.	-	.	Parent=CGI_10017506;
	scaffold853	TRF	Tandem_Repeat	345666	345763	144	+	.	.
scaffold853	subtractBed	intrn	372169	372206	.	-	.	Parent=CGI_10017509;
	scaffold853	TRF	Tandem_Repeat	372169	372206	76	+	.	.
scaffold853	subtractBed	intrn	373423	373488	.	-	.	Parent=CGI_10017509;
	scaffold853	TRF	Tandem_Repeat	373423	373488	123	+	.	.
scaffold853	subtractBed	intrn	373985	374028	.	-	.	Parent=CGI_10017509;
	scaffold853	TRF	Tandem_Repeat	373985	374028	88	+	.	.
scaffold853	subtractBed	intrn	378518	378553	.	-	.	Parent=CGI_10017509;
	scaffold853	TRF	Tandem_Repeat	378518	378553	72	+	.	.
scaffold853	subtractBed	intrn	380409	380453	.	-	.	Parent=CGI_10017509;
	scaffold853	TRF	Tandem_Repeat	380409	380453	74	+	.	.
scaffold853	subtractBed	intrn	426063	426103	.	+	.	Parent=CGI_10017514;
	scaffold853	TRF	Tandem_Repeat	426063	426103	82	+	.	.
scaffold853	subtractBed	intrn	426063	426103	.	-	.	Parent=CGI_10017515;
	scaffold853	TRF	Tandem_Repeat	426063	426103	82	+	.	.
scaffold853	subtractBed	intrn	430815	431597	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_L2	430815	431597	23	-	.	.
scaffold853	subtractBed	intrn	431669	432679	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_L2	431669	432679	655	-	.	.
scaffold853	subtractBed	intrn	432575	432712	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_CR1	432575	432712	21	-	.	.
scaffold853	subtractBed	intrn	430974	431594	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_L2	430974	431594	430	-	.	.
scaffold853	subtractBed	intrn	431402	432679	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_L2	431402	432679	631	-	.	.
scaffold853	subtractBed	intrn	433195	433275	.	-	.	Parent=CGI_10017516;
	scaffold853	WUBlastX	LINE_L2	433195	433275	21	-	.	.
scaffold853	subtractBed	intrn	449121	449189	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	449121	449189	20	-	.	.
scaffold853	subtractBed	intrn	451931	452119	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	451931	452119	33	-	.	.
scaffold853	subtractBed	intrn	452415	453395	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	452415	453395	478	-	.	.
scaffold853	subtractBed	intrn	449961	450677	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	449961	450677	93	-	.	.
scaffold853	subtractBed	intrn	453388	453822	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	453388	453822	194	-	.	.
scaffold853	subtractBed	intrn	453388	453915	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	453388	453915	114	-	.	.
scaffold853	subtractBed	intrn	450000	450521	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	450000	450521	220	-	.	.
scaffold853	subtractBed	intrn	453984	454421	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	453984	454421	47	-	.	.
scaffold853	subtractBed	intrn	449152	449310	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	449152	449310	24	-	.	.
scaffold853	subtractBed	intrn	449631	450548	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	449631	450548	198	-	.	.
scaffold853	subtractBed	intrn	449462	449962	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	449462	449962	48	-	.	.
scaffold853	subtractBed	intrn	452054	452149	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy-Troyk	452054	452149	37	-	.	.
scaffold853	subtractBed	intrn	452364	452669	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	452364	452669	98	-	.	.
scaffold853	subtractBed	intrn	454472	454576	.	-	.	Parent=CGI_10017517;
	scaffold853	WUBlastX	LTR_Gypsy	454472	454576	26	-	.	.
scaffold853	subtractBed	intrn	466190	466684	.	-	.	Parent=CGI_10017519;
	scaffold853	TRF	Tandem_Repeat	466190	466684	954	+	.	.
scaffold853	subtractBed	intrn	471541	471602	.	-	.	Parent=CGI_10017519;
	scaffold853	TRF	Tandem_Repeat	471541	471602	124	+	.	.
scaffold853	subtractBed	intrn	475091	475096	.	-	.	Parent=CGI_10017519;
	scaffold853	WUBlastX	LTR_Ngaro	475091	475372	48	-	.	.
scaffold854	subtractBed	intrn	33395	33433	.	-	.	Parent=CGI_10022232;
	scaffold854	TRF	Tandem_Repeat	33395	33433	78	+	.	.
scaffold854	subtractBed	intrn	39948	40000	.	-	.	Parent=CGI_10022233;
	scaffold854	TRF	Tandem_Repeat	39948	40000	55	+	.	.
scaffold854	subtractBed	intrn	49175	49306	.	-	.	Parent=CGI_10022233;
	scaffold854	TRF	Tandem_Repeat	49175	49306	115	+	.	.
scaffold854	subtractBed	intrn	53903	53989	.	+	.	Parent=CGI_10022234;
	scaffold854	TRF	Tandem_Repeat	53903	53989	79	+	.	.
scaffold854	subtractBed	intrn	54067	54207	.	+	.	Parent=CGI_10022234;
	scaffold854	TRF	Tandem_Repeat	54067	54207	147	+	.	.
scaffold854	subtractBed	intrn	60684	60787	.	+	.	Parent=CGI_10022235;
	scaffold854	TRF	Tandem_Repeat	60684	60787	120	+	.	.
scaffold854	subtractBed	intrn	60817	60988	.	+	.	Parent=CGI_10022235;
	scaffold854	TRF	Tandem_Repeat	60817	60988	120	+	.	.
scaffold854	subtractBed	intrn	60685	60983	.	+	.	Parent=CGI_10022235;
	scaffold854	TRF	Tandem_Repeat	60685	60983	139	+	.	.
scaffold854	subtractBed	intrn	61366	61430	.	+	.	Parent=CGI_10022235;
	scaffold854	TRF	Tandem_Repeat	61366	61430	62	+	.	.
scaffold854	subtractBed	intrn	93999	94046	.	-	.	Parent=CGI_10022238;
	scaffold854	TRF	Tandem_Repeat	93999	94046	87	+	.	.
scaffold854	subtractBed	intrn	115222	115275	.	+	.	Parent=CGI_10022239;
	scaffold854	TRF	Tandem_Repeat	115222	115275	94	+	.	.
scaffold854	subtractBed	intrn	144054	144107	.	+	.	Parent=CGI_10022240;
	scaffold854	TRF	Tandem_Repeat	144054	144107	54	+	.	.
scaffold854	subtractBed	intrn	200971	201125	.	-	.	Parent=CGI_10022242;
	scaffold854	TRF	Tandem_Repeat	200971	201125	202	+	.	.
scaffold854	subtractBed	intrn	217142	217195	.	-	.	Parent=CGI_10022242;
	scaffold854	TRF	Tandem_Repeat	217142	217195	90	+	.	.
scaffold854	subtractBed	intrn	222867	223008	.	-	.	Parent=CGI_10022242;
	scaffold854	TRF	Tandem_Repeat	222867	223008	100	+	.	.
scaffold854	subtractBed	intrn	230957	231251	.	-	.	Parent=CGI_10022242;
	scaffold854	TRF	Tandem_Repeat	230957	231251	326	+	.	.
scaffold854	subtractBed	intrn	267915	268606	.	-	.	Parent=CGI_10022245;
	scaffold854	TRF	Tandem_Repeat	267915	268606	1077	+	.	.
scaffold854	subtractBed	intrn	268616	268666	.	-	.	Parent=CGI_10022245;
	scaffold854	TRF	Tandem_Repeat	268616	268666	84	+	.	.
scaffold854	subtractBed	intrn	317995	318048	.	+	.	Parent=CGI_10022247;
	scaffold854	TRF	Tandem_Repeat	317995	318048	92	+	.	.
scaffold854	subtractBed	intrn	333422	333471	.	+	.	Parent=CGI_10022249;
	scaffold854	TRF	Tandem_Repeat	333422	333471	66	+	.	.
scaffold854	subtractBed	intrn	333644	334556	.	+	.	Parent=CGI_10022249;
	scaffold854	TRF	Tandem_Repeat	333644	334556	1506	+	.	.
scaffold854	subtractBed	intrn	355022	355316	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355022	355316	150	+	.	.
scaffold854	subtractBed	intrn	355271	355702	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355271	355702	221	+	.	.
scaffold854	subtractBed	intrn	355289	355733	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355289	355733	276	+	.	.
scaffold854	subtractBed	intrn	355288	355733	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355288	355733	386	+	.	.
scaffold854	subtractBed	intrn	355515	355623	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355515	355623	50	+	.	.
scaffold854	subtractBed	intrn	355424	355727	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	355424	355727	229	+	.	.
scaffold854	subtractBed	intrn	367355	367408	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	367355	367408	101	+	.	.
scaffold854	subtractBed	intrn	370348	370594	.	+	.	Parent=CGI_10022251;
	scaffold854	TRF	Tandem_Repeat	370348	370594	316	+	.	.
scaffold854	subtractBed	intrn	400046	400083	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	400046	400083	76	+	.	.
scaffold854	subtractBed	intrn	411991	412015	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	411991	412015	50	+	.	.
scaffold854	subtractBed	intrn	416316	416361	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	416316	416361	67	+	.	.
scaffold854	subtractBed	intrn	416311	416364	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	416311	416364	67	+	.	.
scaffold854	subtractBed	intrn	416534	417611	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	416534	417611	1820	+	.	.
scaffold854	subtractBed	intrn	415651	416214	.	+	.	Parent=CGI_10022252;
	scaffold854	WUBlastX	LINE_L1-Tx1	415651	416214	24	-	.	.
scaffold854	subtractBed	intrn	428371	428598	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	428371	428598	240	+	.	.
scaffold854	subtractBed	intrn	428372	428610	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	428372	428610	235	+	.	.
scaffold854	subtractBed	intrn	429195	429454	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	429195	429454	304	+	.	.
scaffold854	subtractBed	intrn	429195	429454	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	429195	429454	322	+	.	.
scaffold854	subtractBed	intrn	429203	429456	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	429203	429456	377	+	.	.
scaffold854	subtractBed	intrn	430956	430992	.	+	.	Parent=CGI_10022252;
	scaffold854	TRF	Tandem_Repeat	430956	430992	74	+	.	.
scaffold854	subtractBed	intrn	450423	450836	.	+	.	Parent=CGI_10022252;
	scaffold854	WUBlastX	LINE_RTE-X	450423	450836	119	-	.	.
scaffold854	subtractBed	intrn	450297	450836	.	+	.	Parent=CGI_10022252;
	scaffold854	WUBlastX	LINE_RTE-X	450297	450836	92	-	.	.
scaffold854	subtractBed	intrn	459632	459669	.	-	.	Parent=CGI_10022253;
	scaffold854	TRF	Tandem_Repeat	459632	459669	76	+	.	.
scaffold854	subtractBed	intrn	476441	476490	.	-	.	Parent=CGI_10022253;
	scaffold854	TRF	Tandem_Repeat	476441	476490	100	+	.	.
scaffold854	subtractBed	intrn	498755	498781	.	+	.	Parent=CGI_10022255;
	scaffold854	TRF	Tandem_Repeat	498755	498781	54	+	.	.
scaffold854	subtractBed	intrn	510534	510586	.	-	.	Parent=CGI_10022256;
	scaffold854	TRF	Tandem_Repeat	510534	510586	106	+	.	.
scaffold854	subtractBed	intrn	510534	510586	.	+	.	Parent=CGI_10022257;
	scaffold854	TRF	Tandem_Repeat	510534	510586	106	+	.	.
scaffold854	subtractBed	intrn	570701	570801	.	-	.	Parent=CGI_10022260;
	scaffold854	TRF	Tandem_Repeat	570701	570801	130	+	.	.
scaffold854	subtractBed	intrn	581488	581573	.	-	.	Parent=CGI_10022260;
	scaffold854	TRF	Tandem_Repeat	581488	581573	54	+	.	.
scaffold854	subtractBed	intrn	581497	581574	.	-	.	Parent=CGI_10022260;
	scaffold854	TRF	Tandem_Repeat	581497	581574	81	+	.	.
scaffold854	subtractBed	intrn	581488	581561	.	-	.	Parent=CGI_10022260;
	scaffold854	TRF	Tandem_Repeat	581488	581561	62	+	.	.
scaffold854	subtractBed	intrn	585629	585672	.	-	.	Parent=CGI_10022260;
	scaffold854	TRF	Tandem_Repeat	585629	585672	79	+	.	.
scaffold854	subtractBed	intrn	595470	595577	.	+	.	Parent=CGI_10022261;
	scaffold854	TRF	Tandem_Repeat	595470	595577	153	+	.	.
scaffold854	subtractBed	intrn	597132	597180	.	+	.	Parent=CGI_10022261;
	scaffold854	TRF	Tandem_Repeat	597132	597180	98	+	.	.
scaffold854	subtractBed	intrn	597182	597814	.	+	.	Parent=CGI_10022261;
	scaffold854	WUBlastX	LINE_L1-Tx1	597182	597814	129	+	.	.
scaffold854	subtractBed	intrn	597843	598088	.	+	.	Parent=CGI_10022261;
	scaffold854	WUBlastX	LINE_L1-Tx1	597843	598088	81	+	.	.
scaffold854	subtractBed	intrn	597843	598214	.	+	.	Parent=CGI_10022261;
	scaffold854	WUBlastX	LINE_L1	597843	598214	20	+	.	.
scaffold854	subtractBed	intrn	620128	620912	.	+	.	Parent=CGI_10022262;
	scaffold854	TRF	Tandem_Repeat	620128	620912	1036	+	.	.
scaffold854	subtractBed	intrn	615343	615735	.	+	.	Parent=CGI_10022262;
	scaffold854	WUBlastX	LINE_L1-Tx1	615343	615735	144	+	.	.
scaffold854	subtractBed	intrn	703861	704424	.	+	.	Parent=CGI_10022264;
	scaffold854	WUBlastX	LTR_Pao	703861	704424	173	+	.	.
scaffold854	subtractBed	intrn	703378	704277	.	+	.	Parent=CGI_10022264;
	scaffold854	WUBlastX	LTR_Pao	703378	704277	229	+	.	.
scaffold854	subtractBed	intrn	703027	703824	.	+	.	Parent=CGI_10022264;
	scaffold854	WUBlastX	LTR_Pao	703027	703824	44	+	.	.
scaffold854	subtractBed	intrn	708495	708528	.	+	.	Parent=CGI_10022264;
	scaffold854	TRF	Tandem_Repeat	708495	708528	59	+	.	.
scaffold854	subtractBed	intrn	721675	721728	.	+	.	Parent=CGI_10022264;
	scaffold854	TRF	Tandem_Repeat	721675	721728	108	+	.	.
scaffold854	subtractBed	intrn	728817	728934	.	+	.	Parent=CGI_10022264;
	scaffold854	TRF	Tandem_Repeat	728817	728934	155	+	.	.
scaffold854	subtractBed	intrn	728817	728958	.	+	.	Parent=CGI_10022264;
	scaffold854	TRF	Tandem_Repeat	728817	728958	90	+	.	.
scaffold855	subtractBed	intrn	7598	7663	.	+	.	Parent=CGI_10001160;
	scaffold855	TRF	Tandem_Repeat	7598	7663	123	+	.	.
scaffold855	subtractBed	intrn	8890	8928	.	+	.	Parent=CGI_10001160;
	scaffold855	TRF	Tandem_Repeat	8890	8928	69	+	.	.
scaffold855	subtractBed	intrn	2320	3141	.	+	.	Parent=CGI_10001160;
	scaffold855	WUBlastX	DNA_Maverick	2320	3141	74	+	.	.
scaffold855	subtractBed	intrn	3229	3360	.	+	.	Parent=CGI_10001160;
	scaffold855	WUBlastX	DNA_Maverick	3229	3360	50	+	.	.
scaffold855	subtractBed	intrn	2554	3108	.	+	.	Parent=CGI_10001160;
	scaffold855	WUBlastX	DNA_Maverick	2554	3108	103	+	.	.
scaffold858	subtractBed	intrn	15114	15359	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_CR1-L2	15114	15359	50	-	.	.
scaffold858	subtractBed	intrn	15398	16354	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_L2	15398	16354	569	-	.	.
scaffold858	subtractBed	intrn	15203	16306	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_L2	15203	16306	268	-	.	.
scaffold858	subtractBed	intrn	16894	16944	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_Jockey	16894	16944	20	-	.	.
scaffold858	subtractBed	intrn	16512	16625	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_L2	16512	16625	35	-	.	.
scaffold858	subtractBed	intrn	17344	17397	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_L2	17344	17397	24	-	.	.
scaffold858	subtractBed	intrn	15353	16606	.	-	.	Parent=CGI_10004935;
	scaffold858	WUBlastX	LINE_L2	15353	16606	167	-	.	.
scaffold858	subtractBed	intrn	94009	94038	.	-	.	Parent=CGI_10004937;
	scaffold858	TRF	Tandem_Repeat	94009	94038	60	+	.	.
scaffold86	subtractBed	intrn	44133	44873	.	+	.	Parent=CGI_10028132;
	scaffold86	WUBlastX	LTR_Gypsy	44133	44873	88	-	.	.
scaffold86	subtractBed	intrn	56335	56530	.	-	.	Parent=CGI_10028133;
	scaffold86	TRF	Tandem_Repeat	56335	56530	183	+	.	.
scaffold86	subtractBed	intrn	61247	61292	.	-	.	Parent=CGI_10028133;
	scaffold86	TRF	Tandem_Repeat	61247	61292	60	+	.	.
scaffold86	subtractBed	intrn	61245	61293	.	-	.	Parent=CGI_10028133;
	scaffold86	TRF	Tandem_Repeat	61245	61293	73	+	.	.
scaffold86	subtractBed	intrn	93942	94106	.	-	.	Parent=CGI_10028134;
	scaffold86	TRF	Tandem_Repeat	93942	94106	204	+	.	.
scaffold86	subtractBed	intrn	93941	94106	.	-	.	Parent=CGI_10028134;
	scaffold86	TRF	Tandem_Repeat	93941	94106	226	+	.	.
scaffold86	subtractBed	intrn	94229	94496	.	-	.	Parent=CGI_10028134;
	scaffold86	TRF	Tandem_Repeat	94229	94496	430	+	.	.
scaffold86	subtractBed	intrn	150576	150815	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	150576	150815	86	-	.	.
scaffold86	subtractBed	intrn	151506	151718	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	151506	151718	68	-	.	.
scaffold86	subtractBed	intrn	149346	149534	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	149346	149534	51	+	.	.
scaffold86	subtractBed	intrn	149896	150054	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	149896	150054	77	+	.	.
scaffold86	subtractBed	intrn	151157	151348	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	151157	151348	47	-	.	.
scaffold86	subtractBed	intrn	151163	151312	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	151163	151312	56	-	.	.
scaffold86	subtractBed	intrn	149857	150057	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	149857	150057	69	+	.	.
scaffold86	subtractBed	intrn	151789	151899	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	151789	151899	29	-	.	.
scaffold86	subtractBed	intrn	152021	152110	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	152021	152110	37	-	.	.
scaffold86	subtractBed	intrn	152706	153047	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	152706	153047	137	-	.	.
scaffold86	subtractBed	intrn	152250	152492	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	152250	152492	118	-	.	.
scaffold86	subtractBed	intrn	152739	153188	.	-	.	Parent=CGI_10028139;
	scaffold86	WUBlastX	DNA_Kolobok	152739	153188	38	-	.	.
scaffold86	subtractBed	intrn	158192	158230	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	158192	158230	71	+	.	.
scaffold86	subtractBed	intrn	159785	159973	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	159785	159973	193	+	.	.
scaffold86	subtractBed	intrn	167235	167335	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	167235	167335	64	+	.	.
scaffold86	subtractBed	intrn	167408	167831	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	167408	167831	200	+	.	.
scaffold86	subtractBed	intrn	167412	167587	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	167412	167587	157	+	.	.
scaffold86	subtractBed	intrn	168122	168448	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	168122	168448	308	+	.	.
scaffold86	subtractBed	intrn	168122	168448	.	+	.	Parent=CGI_10028140;
	scaffold86	TRF	Tandem_Repeat	168122	168448	370	+	.	.
scaffold86	subtractBed	intrn	189297	189686	.	-	.	Parent=CGI_10028141;
	scaffold86	TRF	Tandem_Repeat	189297	189686	512	+	.	.
scaffold86	subtractBed	intrn	190112	190431	.	-	.	Parent=CGI_10028141;
	scaffold86	TRF	Tandem_Repeat	190112	190431	385	+	.	.
scaffold86	subtractBed	intrn	205361	205621	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LTR_Pao	205361	205621	257	+	.	.
scaffold86	subtractBed	intrn	200986	205353	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LTR_Pao	200986	205353	2885	+	.	.
scaffold86	subtractBed	intrn	205367	205690	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LTR_Pao	205367	205690	102	+	.	.
scaffold86	subtractBed	intrn	200980	201822	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LTR_Pao	200791	201822	23	+	.	.
scaffold86	subtractBed	intrn	218477	218510	.	+	.	Parent=CGI_10028142;
	scaffold86	TRF	Tandem_Repeat	218477	218510	68	+	.	.
scaffold86	subtractBed	intrn	218096	218257	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	218096	218257	29	+	.	.
scaffold86	subtractBed	intrn	217920	218075	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217920	218075	35	+	.	.
scaffold86	subtractBed	intrn	217098	217394	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1	217098	217394	35	+	.	.
scaffold86	subtractBed	intrn	217092	217565	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1	217092	217565	24	+	.	.
scaffold86	subtractBed	intrn	217592	217765	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217592	217765	59	+	.	.
scaffold86	subtractBed	intrn	217682	217909	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217682	217909	31	+	.	.
scaffold86	subtractBed	intrn	218060	218227	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	218060	218227	30	+	.	.
scaffold86	subtractBed	intrn	216521	217057	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	216521	217057	151	+	.	.
scaffold86	subtractBed	intrn	217068	217220	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217068	217220	92	+	.	.
scaffold86	subtractBed	intrn	217095	217250	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217095	217250	76	+	.	.
scaffold86	subtractBed	intrn	217685	217849	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217685	217849	56	+	.	.
scaffold86	subtractBed	intrn	217917	218036	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1-Tx1	217917	218036	41	+	.	.
scaffold86	subtractBed	intrn	217661	217768	.	+	.	Parent=CGI_10028142;
	scaffold86	WUBlastX	LINE_L1	217661	217768	75	+	.	.
scaffold86	subtractBed	intrn	226383	226395	.	-	.	Parent=CGI_10028143;
	scaffold86	WUBlastX	DNA_IS4EU	226174	226395	139	-	.	.
scaffold86	subtractBed	intrn	227235	227284	.	-	.	Parent=CGI_10028143;
	scaffold86	WUBlastX	DNA_IS4EU	226613	227284	397	-	.	.
scaffold86	subtractBed	intrn	227497	227536	.	-	.	Parent=CGI_10028143;
	scaffold86	WUBlastX	DNA_Kolobok-IS4	227497	227724	27	-	.	.
scaffold86	subtractBed	intrn	228354	228356	.	-	.	Parent=CGI_10028143;
	scaffold86	WUBlastX	DNA_IS4EU	228354	228665	51	-	.	.
scaffold86	subtractBed	intrn	236663	237621	.	-	.	Parent=CGI_10028144;
	scaffold86	TRF	Tandem_Repeat	236663	237621	1386	+	.	.
scaffold86	subtractBed	intrn	237652	237690	.	-	.	Parent=CGI_10028144;
	scaffold86	TRF	Tandem_Repeat	237652	237690	51	+	.	.
scaffold86	subtractBed	intrn	244351	244728	.	-	.	Parent=CGI_10028144;
	scaffold86	WUBlastX	LINE_Penelope	244351	244728	118	-	.	.
scaffold86	subtractBed	intrn	244297	244599	.	-	.	Parent=CGI_10028144;
	scaffold86	WUBlastX	LINE_Penelope	244297	244599	149	-	.	.
scaffold86	subtractBed	intrn	281086	282058	.	-	.	Parent=CGI_10028145;
	scaffold86	TRF	Tandem_Repeat	281086	282058	1455	+	.	.
scaffold86	subtractBed	intrn	319833	319862	.	-	.	Parent=CGI_10028147;
	scaffold86	TRF	Tandem_Repeat	319833	319862	51	+	.	.
scaffold86	subtractBed	intrn	321089	321131	.	-	.	Parent=CGI_10028147;
	scaffold86	TRF	Tandem_Repeat	321089	321131	50	+	.	.
scaffold86	subtractBed	intrn	321228	321305	.	-	.	Parent=CGI_10028147;
	scaffold86	TRF	Tandem_Repeat	321228	321305	50	+	.	.
scaffold86	subtractBed	intrn	327861	327913	.	-	.	Parent=CGI_10028147;
	scaffold86	TRF	Tandem_Repeat	327861	327913	54	+	.	.
scaffold86	subtractBed	intrn	339021	339047	.	-	.	Parent=CGI_10028148;
	scaffold86	TRF	Tandem_Repeat	339021	339047	54	+	.	.
scaffold86	subtractBed	intrn	341932	342406	.	-	.	Parent=CGI_10028148;
	scaffold86	TRF	Tandem_Repeat	341932	342406	505	+	.	.
scaffold86	subtractBed	intrn	345560	345595	.	-	.	Parent=CGI_10028148;
	scaffold86	TRF	Tandem_Repeat	345560	345595	72	+	.	.
scaffold86	subtractBed	intrn	348355	348568	.	-	.	Parent=CGI_10028148;
	scaffold86	TRF	Tandem_Repeat	348355	348604	401	+	.	.
scaffold86	subtractBed	intrn	383313	383346	.	+	.	Parent=CGI_10028150;
	scaffold86	TRF	Tandem_Repeat	383313	383346	68	+	.	.
scaffold86	subtractBed	intrn	399545	399964	.	+	.	Parent=CGI_10028152;
	scaffold86	WUBlastX	DNA_Academ	399545	399964	110	+	.	.
scaffold86	subtractBed	intrn	399734	399979	.	+	.	Parent=CGI_10028152;
	scaffold86	WUBlastX	DNA_Academ	399734	399979	115	+	.	.
scaffold86	subtractBed	intrn	399473	399580	.	+	.	Parent=CGI_10028152;
	scaffold86	WUBlastX	DNA_Academ	398939	399580	226	+	.	.
scaffold86	subtractBed	intrn	399876	400295	.	+	.	Parent=CGI_10028152;
	scaffold86	WUBlastX	DNA_Academ	399876	400295	182	+	.	.
scaffold86	subtractBed	intrn	578568	578642	.	+	.	Parent=CGI_10028160;
	scaffold86	WUBlastX	DNA_Sola	578568	578930	74	+	.	.
scaffold86	subtractBed	intrn	578920	578930	.	+	.	Parent=CGI_10028160;
	scaffold86	WUBlastX	DNA_Sola	578568	578930	74	+	.	.
scaffold86	subtractBed	intrn	600277	600470	.	+	.	Parent=CGI_10028161;
	scaffold86	TRF	Tandem_Repeat	600277	600470	325	+	.	.
scaffold86	subtractBed	intrn	609111	609283	.	-	.	Parent=CGI_10028162;
	scaffold86	TRF	Tandem_Repeat	609111	609283	346	+	.	.
scaffold86	subtractBed	intrn	614793	614830	.	-	.	Parent=CGI_10028162;
	scaffold86	TRF	Tandem_Repeat	614793	614830	76	+	.	.
scaffold86	subtractBed	intrn	753771	753837	.	-	.	Parent=CGI_10028171;
	scaffold86	TRF	Tandem_Repeat	753771	753837	116	+	.	.
scaffold86	subtractBed	intrn	754420	754469	.	-	.	Parent=CGI_10028171;
	scaffold86	TRF	Tandem_Repeat	754420	754469	100	+	.	.
scaffold86	subtractBed	intrn	806682	807479	.	+	.	Parent=CGI_10028175;
	scaffold86	WUBlastX	LTR_Gypsy	806043	807479	1039	-	.	.
scaffold86	subtractBed	intrn	878823	882223	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	878823	882223	4945	+	.	.
scaffold86	subtractBed	intrn	879110	879228	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	879110	879228	55	+	.	.
scaffold86	subtractBed	intrn	878823	882223	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	878823	882223	4990	+	.	.
scaffold86	subtractBed	intrn	878823	882218	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	878823	882218	5810	+	.	.
scaffold86	subtractBed	intrn	879815	879933	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	879815	879933	55	+	.	.
scaffold86	subtractBed	intrn	880614	880732	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	880614	880732	55	+	.	.
scaffold86	subtractBed	intrn	880943	881061	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	880943	881061	55	+	.	.
scaffold86	subtractBed	intrn	881742	881860	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	881742	881860	55	+	.	.
scaffold86	subtractBed	intrn	884772	885479	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	884772	885479	679	+	.	.
scaffold86	subtractBed	intrn	884823	885479	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	884823	885479	635	+	.	.
scaffold86	subtractBed	intrn	889779	890381	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	889779	890381	602	+	.	.
scaffold86	subtractBed	intrn	889857	890381	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	889857	890381	536	+	.	.
scaffold86	subtractBed	intrn	889975	890080	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	889975	890080	118	+	.	.
scaffold86	subtractBed	intrn	897203	897700	.	-	.	Parent=CGI_10028178;
	scaffold86	TRF	Tandem_Repeat	897203	897700	718	+	.	.
scaffold86	subtractBed	intrn	918736	918780	.	+	.	Parent=CGI_10028180;
	scaffold86	TRF	Tandem_Repeat	918736	918780	90	+	.	.
scaffold86	subtractBed	intrn	921271	921536	.	-	.	Parent=CGI_10028181;
	scaffold86	TRF	Tandem_Repeat	921271	921536	383	+	.	.
scaffold86	subtractBed	intrn	924316	926105	.	-	.	Parent=CGI_10028181;
	scaffold86	TRF	Tandem_Repeat	924316	926105	2466	+	.	.
scaffold86	subtractBed	intrn	965793	966282	.	-	.	Parent=CGI_10028183;
	scaffold86	TRF	Tandem_Repeat	965793	966296	777	+	.	.
scaffold86	subtractBed	intrn	966913	967016	.	-	.	Parent=CGI_10028183;
	scaffold86	TRF	Tandem_Repeat	966913	967016	120	+	.	.
scaffold86	subtractBed	intrn	1015170	1015220	.	-	.	Parent=CGI_10028184;
	scaffold86	TRF	Tandem_Repeat	1015170	1015220	102	+	.	.
scaffold86	subtractBed	intrn	1022552	1022589	.	-	.	Parent=CGI_10028184;
	scaffold86	TRF	Tandem_Repeat	1022552	1022589	76	+	.	.
scaffold86	subtractBed	intrn	1118148	1118202	.	+	.	Parent=CGI_10028187;
	scaffold86	TRF	Tandem_Repeat	1118148	1118202	110	+	.	.
scaffold86	subtractBed	intrn	1121576	1121604	.	+	.	Parent=CGI_10028188;
	scaffold86	TRF	Tandem_Repeat	1121576	1121604	58	+	.	.
scaffold86	subtractBed	intrn	1193830	1194192	.	-	.	Parent=CGI_10028193;
	scaffold86	TRF	Tandem_Repeat	1193830	1194192	591	+	.	.
scaffold86	subtractBed	intrn	1194322	1194772	.	-	.	Parent=CGI_10028193;
	scaffold86	TRF	Tandem_Repeat	1194322	1194772	172	+	.	.
scaffold86	subtractBed	intrn	1194491	1194768	.	-	.	Parent=CGI_10028193;
	scaffold86	TRF	Tandem_Repeat	1194491	1194768	190	+	.	.
scaffold86	subtractBed	intrn	1197619	1197666	.	-	.	Parent=CGI_10028193;
	scaffold86	TRF	Tandem_Repeat	1197619	1197666	51	+	.	.
scaffold86	subtractBed	intrn	1197622	1197666	.	-	.	Parent=CGI_10028193;
	scaffold86	TRF	Tandem_Repeat	1197622	1197666	72	+	.	.
scaffold86	subtractBed	intrn	1236953	1237443	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1236953	1237443	563	+	.	.
scaffold86	subtractBed	intrn	1236953	1237442	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1236953	1237442	554	+	.	.
scaffold86	subtractBed	intrn	1236954	1237443	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1236954	1237443	578	+	.	.
scaffold86	subtractBed	intrn	1241377	1241408	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1241377	1241408	64	+	.	.
scaffold86	subtractBed	intrn	1251139	1251178	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1251139	1251178	73	+	.	.
scaffold86	subtractBed	intrn	1260162	1260389	.	+	.	Parent=CGI_10028197;
	scaffold86	WUBlastX	LINE_RTE-BovB	1260162	1260389	105	-	.	.
scaffold86	subtractBed	intrn	1260053	1260484	.	+	.	Parent=CGI_10028197;
	scaffold86	WUBlastX	LINE_RTE-BovB	1260053	1260484	70	-	.	.
scaffold86	subtractBed	intrn	1266660	1267565	.	+	.	Parent=CGI_10028197;
	scaffold86	TRF	Tandem_Repeat	1266660	1267565	1532	+	.	.
scaffold86	subtractBed	intrn	1277510	1277977	.	+	.	Parent=CGI_10028197;
	scaffold86	WUBlastX	LTR_Gypsy-Cigr	1277510	1277977	149	-	.	.
scaffold86	subtractBed	intrn	1277453	1278139	.	+	.	Parent=CGI_10028197;
	scaffold86	WUBlastX	LTR_Gypsy	1277453	1278139	41	-	.	.
scaffold86	subtractBed	intrn	1266660	1267565	.	-	.	Parent=CGI_10028198;
	scaffold86	TRF	Tandem_Repeat	1266660	1267565	1532	+	.	.
scaffold86	subtractBed	intrn	1293913	1293991	.	-	.	Parent=CGI_10028199;
	scaffold86	TRF	Tandem_Repeat	1293913	1293991	158	+	.	.
scaffold86	subtractBed	intrn	1304516	1304584	.	+	.	Parent=CGI_10028200;
	scaffold86	TRF	Tandem_Repeat	1304516	1304584	102	+	.	.
scaffold86	subtractBed	intrn	1312543	1312568	.	+	.	Parent=CGI_10028200;
	scaffold86	TRF	Tandem_Repeat	1312543	1312568	52	+	.	.
scaffold86	subtractBed	intrn	1352917	1352979	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352917	1353276	46	-	.	.
scaffold86	subtractBed	intrn	1352593	1352979	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352593	1353180	47	-	.	.
scaffold86	subtractBed	intrn	1352824	1352979	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352824	1353174	53	-	.	.
scaffold86	subtractBed	intrn	1353146	1353276	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352917	1353276	46	-	.	.
scaffold86	subtractBed	intrn	1353470	1353544	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1353470	1353544	33	-	.	.
scaffold86	subtractBed	intrn	1353146	1353180	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352593	1353180	47	-	.	.
scaffold86	subtractBed	intrn	1353146	1353174	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1352824	1353174	53	-	.	.
scaffold86	subtractBed	intrn	1353452	1353520	.	-	.	Parent=CGI_10028203;
	scaffold86	WUBlastX	DNA_Kolobok-Hyd	1353452	1353520	29	-	.	.
scaffold86	subtractBed	intrn	1380557	1380604	.	-	.	Parent=CGI_10028207;
	scaffold86	TRF	Tandem_Repeat	1380557	1380604	71	+	.	.
scaffold86	subtractBed	intrn	1381792	1381849	.	-	.	Parent=CGI_10028207;
	scaffold86	TRF	Tandem_Repeat	1381792	1381849	55	+	.	.
scaffold86	subtractBed	intrn	1465908	1467032	.	-	.	Parent=CGI_10028213;
	scaffold86	TRF	Tandem_Repeat	1465908	1467032	1582	+	.	.
scaffold86	subtractBed	intrn	1553838	1553925	.	-	.	Parent=CGI_10028219;
	scaffold86	TRF	Tandem_Repeat	1553838	1553925	68	+	.	.
scaffold86	subtractBed	intrn	1557690	1557726	.	-	.	Parent=CGI_10028219;
	scaffold86	TRF	Tandem_Repeat	1557690	1557726	74	+	.	.
scaffold86	subtractBed	intrn	1557724	1557772	.	-	.	Parent=CGI_10028219;
	scaffold86	TRF	Tandem_Repeat	1557724	1557772	98	+	.	.
scaffold86	subtractBed	intrn	1578015	1578062	.	+	.	Parent=CGI_10028222;
	scaffold86	TRF	Tandem_Repeat	1578015	1578062	62	+	.	.
scaffold86	subtractBed	intrn	1580160	1580185	.	+	.	Parent=CGI_10028222;
	scaffold86	TRF	Tandem_Repeat	1580160	1580185	52	+	.	.
scaffold86	subtractBed	intrn	1585054	1586833	.	+	.	Parent=CGI_10028222;
	scaffold86	TRF	Tandem_Repeat	1585054	1586833	1170	+	.	.
scaffold86	subtractBed	intrn	1585254	1585386	.	+	.	Parent=CGI_10028222;
	scaffold86	TRF	Tandem_Repeat	1585254	1585386	257	+	.	.
scaffold86	subtractBed	intrn	1591782	1592101	.	+	.	Parent=CGI_10028223;
	scaffold86	TRF	Tandem_Repeat	1591782	1592101	140	+	.	.
scaffold86	subtractBed	intrn	1635621	1635680	.	+	.	Parent=CGI_10028225;
	scaffold86	TRF	Tandem_Repeat	1635621	1635680	120	+	.	.
scaffold86	subtractBed	intrn	1635738	1635768	.	+	.	Parent=CGI_10028225;
	scaffold86	TRF	Tandem_Repeat	1635738	1635768	62	+	.	.
scaffold86	subtractBed	intrn	1649578	1649791	.	-	.	Parent=CGI_10028226;
	scaffold86	TRF	Tandem_Repeat	1649578	1649791	83	+	.	.
scaffold86	subtractBed	intrn	1665171	1666256	.	-	.	Parent=CGI_10028226;
	scaffold86	TRF	Tandem_Repeat	1665171	1666256	1481	+	.	.
scaffold86	subtractBed	intrn	1683291	1683325	.	-	.	Parent=CGI_10028228;
	scaffold86	TRF	Tandem_Repeat	1683291	1683325	70	+	.	.
scaffold86	subtractBed	intrn	1686648	1687513	.	+	.	Parent=CGI_10028229;
	scaffold86	TRF	Tandem_Repeat	1686648	1687513	1418	+	.	.
scaffold86	subtractBed	intrn	1694229	1694265	.	+	.	Parent=CGI_10028229;
	scaffold86	TRF	Tandem_Repeat	1694229	1694265	56	+	.	.
scaffold865	subtractBed	intrn	11825	11865	.	-	.	Parent=CGI_10002639;
	scaffold865	TRF	Tandem_Repeat	11825	11865	82	+	.	.
scaffold865	subtractBed	intrn	20288	20794	.	-	.	Parent=CGI_10002639;
	scaffold865	TRF	Tandem_Repeat	20288	20794	517	+	.	.
scaffold865	subtractBed	intrn	20221	20795	.	-	.	Parent=CGI_10002639;
	scaffold865	TRF	Tandem_Repeat	20221	20795	459	+	.	.
scaffold865	subtractBed	intrn	18910	19071	.	-	.	Parent=CGI_10002639;
	scaffold865	WUBlastX	LTR_Ngaro	18910	19071	87	-	.	.
scaffold865	subtractBed	intrn	19112	19837	.	-	.	Parent=CGI_10002639;
	scaffold865	WUBlastX	LTR_Ngaro	19112	19837	101	-	.	.
scaffold865	subtractBed	intrn	19112	19495	.	-	.	Parent=CGI_10002639;
	scaffold865	WUBlastX	LTR_Ngaro	19112	19495	125	-	.	.
scaffold866	subtractBed	intrn	22532	22612	.	+	.	Parent=CGI_10004740;
	scaffold866	TRF	Tandem_Repeat	22532	22612	162	+	.	.
scaffold866	subtractBed	intrn	30818	30861	.	+	.	Parent=CGI_10004740;
	scaffold866	TRF	Tandem_Repeat	30818	30861	88	+	.	.
scaffold866	subtractBed	intrn	45276	45438	.	+	.	Parent=CGI_10004741;
	scaffold866	TRF	Tandem_Repeat	45276	45438	287	+	.	.
scaffold866	subtractBed	intrn	54357	54409	.	+	.	Parent=CGI_10004743;
	scaffold866	TRF	Tandem_Repeat	54357	54409	106	+	.	.
scaffold866	subtractBed	intrn	57077	57186	.	+	.	Parent=CGI_10004744;
	scaffold866	TRF	Tandem_Repeat	57077	57186	197	+	.	.
scaffold866	subtractBed	intrn	57077	57186	.	-	.	Parent=CGI_10004745;
	scaffold866	TRF	Tandem_Repeat	57077	57186	197	+	.	.
scaffold866	subtractBed	intrn	60620	60669	.	-	.	Parent=CGI_10004745;
	scaffold866	TRF	Tandem_Repeat	60620	60669	100	+	.	.
scaffold866	subtractBed	intrn	62786	63508	.	-	.	Parent=CGI_10004745;
	scaffold866	TRF	Tandem_Repeat	62786	63508	1091	+	.	.
scaffold866	subtractBed	intrn	68675	68707	.	-	.	Parent=CGI_10004745;
	scaffold866	TRF	Tandem_Repeat	68675	68707	57	+	.	.
scaffold866	subtractBed	intrn	90552	90598	.	+	.	Parent=CGI_10004749;
	scaffold866	TRF	Tandem_Repeat	90552	90598	85	+	.	.
scaffold866	subtractBed	intrn	87388	87609	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	DNA_Sola	87388	87609	43	+	.	.
scaffold866	subtractBed	intrn	87454	87627	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	DNA_Sola	87454	87627	86	+	.	.
scaffold866	subtractBed	intrn	92924	92984	.	+	.	Parent=CGI_10004749;
	scaffold866	TRF	Tandem_Repeat	92924	92984	122	+	.	.
scaffold866	subtractBed	intrn	94615	95031	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_RTE-X	94615	95031	108	+	.	.
scaffold866	subtractBed	intrn	94615	94965	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_RTE-X	94615	94965	193	+	.	.
scaffold866	subtractBed	intrn	95025	95159	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_RTE-X	95025	95159	66	+	.	.
scaffold866	subtractBed	intrn	95287	95562	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_RTE-X	95287	95562	95	+	.	.
scaffold866	subtractBed	intrn	95666	95749	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_RTE-X	95666	95749	48	+	.	.
scaffold866	subtractBed	intrn	91547	91723	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	DNA_Sola	91547	91723	109	+	.	.
scaffold866	subtractBed	intrn	95251	95469	.	+	.	Parent=CGI_10004749;
	scaffold866	WUBlastX	LINE_L2	95251	95469	32	+	.	.
scaffold866	subtractBed	intrn	106102	106141	.	+	.	Parent=CGI_10004749;
	scaffold866	TRF	Tandem_Repeat	106102	106141	64	+	.	.
scaffold867	subtractBed	intrn	3595	3978	.	+	.	Parent=CGI_10026210;
	scaffold867	WUBlastX	LINE_L1-Tx1	3595	3978	84	+	.	.
scaffold867	subtractBed	intrn	4110	4976	.	+	.	Parent=CGI_10026210;
	scaffold867	WUBlastX	LINE_L1-Tx1	4110	4976	78	+	.	.
scaffold867	subtractBed	intrn	3655	4005	.	+	.	Parent=CGI_10026210;
	scaffold867	WUBlastX	LINE_L1-Tx1	3655	4005	114	+	.	.
scaffold867	subtractBed	intrn	3511	3978	.	+	.	Parent=CGI_10026210;
	scaffold867	WUBlastX	LINE_L1	3511	3978	29	+	.	.
scaffold867	subtractBed	intrn	61725	61774	.	-	.	Parent=CGI_10026212;
	scaffold867	TRF	Tandem_Repeat	61725	61774	57	+	.	.
scaffold867	subtractBed	intrn	64267	64293	.	-	.	Parent=CGI_10026212;
	scaffold867	TRF	Tandem_Repeat	64267	64293	54	+	.	.
scaffold867	subtractBed	intrn	64295	64334	.	-	.	Parent=CGI_10026212;
	scaffold867	TRF	Tandem_Repeat	64295	64334	80	+	.	.
scaffold867	subtractBed	intrn	66098	66162	.	-	.	Parent=CGI_10026212;
	scaffold867	TRF	Tandem_Repeat	66098	66162	85	+	.	.
scaffold867	subtractBed	intrn	78945	79013	.	-	.	Parent=CGI_10026213;
	scaffold867	TRF	Tandem_Repeat	78945	79013	120	+	.	.
scaffold867	subtractBed	intrn	80516	80553	.	-	.	Parent=CGI_10026213;
	scaffold867	TRF	Tandem_Repeat	80516	80553	76	+	.	.
scaffold867	subtractBed	intrn	80735	80768	.	-	.	Parent=CGI_10026213;
	scaffold867	TRF	Tandem_Repeat	80735	80768	68	+	.	.
scaffold867	subtractBed	intrn	98499	99053	.	-	.	Parent=CGI_10026214;
	scaffold867	TRF	Tandem_Repeat	98499	99053	770	+	.	.
scaffold867	subtractBed	intrn	256030	256272	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	256030	256272	84	+	.	.
scaffold867	subtractBed	intrn	256313	256399	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	256313	256399	30	+	.	.
scaffold867	subtractBed	intrn	256027	256314	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1	256027	256314	66	+	.	.
scaffold867	subtractBed	intrn	254362	254490	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1	254362	254490	64	+	.	.
scaffold867	subtractBed	intrn	254820	255548	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	DNA_TcMar-Tc1	254820	255548	263	+	.	.
scaffold867	subtractBed	intrn	255483	255596	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	DNA_TcMar-Tc1	255483	255596	48	+	.	.
scaffold867	subtractBed	intrn	254377	254598	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	254377	254598	52	+	.	.
scaffold867	subtractBed	intrn	254198	254383	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	254198	254383	100	+	.	.
scaffold867	subtractBed	intrn	255586	255795	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	DNA_TcMar-Tc1	255586	255795	145	+	.	.
scaffold867	subtractBed	intrn	254168	254353	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	254168	254353	55	+	.	.
scaffold867	subtractBed	intrn	254126	254347	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	254126	254347	45	+	.	.
scaffold867	subtractBed	intrn	256334	256414	.	-	.	Parent=CGI_10026215;
	scaffold867	WUBlastX	LINE_L1-Tx1	256334	256414	21	+	.	.
scaffold867	subtractBed	intrn	260940	261967	.	-	.	Parent=CGI_10026215;
	scaffold867	TRF	Tandem_Repeat	260940	261967	977	+	.	.
scaffold867	subtractBed	intrn	281741	281889	.	+	.	Parent=CGI_10026216;
	scaffold867	TRF	Tandem_Repeat	281741	281889	120	+	.	.
scaffold867	subtractBed	intrn	284779	285117	.	+	.	Parent=CGI_10026216;
	scaffold867	WUBlastX	DNA_Harbinger	284779	285117	95	+	.	.
scaffold867	subtractBed	intrn	284044	285066	.	+	.	Parent=CGI_10026216;
	scaffold867	WUBlastX	DNA_Harbinger	284044	285066	247	+	.	.
scaffold867	subtractBed	intrn	293633	293919	.	+	.	Parent=CGI_10026218;
	scaffold867	TRF	Tandem_Repeat	293633	293919	249	+	.	.
scaffold867	subtractBed	intrn	338841	338925	.	+	.	Parent=CGI_10026223;
	scaffold867	TRF	Tandem_Repeat	338841	338925	161	+	.	.
scaffold867	subtractBed	intrn	341221	341261	.	+	.	Parent=CGI_10026223;
	scaffold867	TRF	Tandem_Repeat	341221	341261	82	+	.	.
scaffold867	subtractBed	intrn	350396	350436	.	+	.	Parent=CGI_10026223;
	scaffold867	TRF	Tandem_Repeat	350396	350436	82	+	.	.
scaffold867	subtractBed	intrn	351337	351394	.	+	.	Parent=CGI_10026223;
	scaffold867	TRF	Tandem_Repeat	351337	351394	98	+	.	.
scaffold867	subtractBed	intrn	338841	338925	.	-	.	Parent=CGI_10026224;
	scaffold867	TRF	Tandem_Repeat	338841	338925	161	+	.	.
scaffold867	subtractBed	intrn	341221	341261	.	-	.	Parent=CGI_10026224;
	scaffold867	TRF	Tandem_Repeat	341221	341261	82	+	.	.
scaffold867	subtractBed	intrn	361125	361451	.	-	.	Parent=CGI_10026225;
	scaffold867	TRF	Tandem_Repeat	361125	361451	460	+	.	.
scaffold867	subtractBed	intrn	361549	361598	.	-	.	Parent=CGI_10026225;
	scaffold867	TRF	Tandem_Repeat	361549	361598	100	+	.	.
scaffold867	subtractBed	intrn	380739	380765	.	-	.	Parent=CGI_10026226;
	scaffold867	TRF	Tandem_Repeat	380739	380765	54	+	.	.
scaffold867	subtractBed	intrn	420204	420297	.	-	.	Parent=CGI_10026230;
	scaffold867	TRF	Tandem_Repeat	420204	420297	179	+	.	.
scaffold867	subtractBed	intrn	456095	456139	.	+	.	Parent=CGI_10026231;
	scaffold867	TRF	Tandem_Repeat	456095	456139	56	+	.	.
scaffold867	subtractBed	intrn	494219	494247	.	-	.	Parent=CGI_10026232;
	scaffold867	TRF	Tandem_Repeat	494219	494247	58	+	.	.
scaffold867	subtractBed	intrn	496229	496804	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_L2	496229	496804	100	+	.	.
scaffold867	subtractBed	intrn	496782	497594	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_RTE-X	496782	497594	184	+	.	.
scaffold867	subtractBed	intrn	495313	495372	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_Jockey	495313	495372	20	+	.	.
scaffold867	subtractBed	intrn	497367	497669	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_RTE-X	497367	497669	22	+	.	.
scaffold867	subtractBed	intrn	496322	496840	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_RTE-X	496322	496840	269	+	.	.
scaffold867	subtractBed	intrn	494887	494913	.	-	.	Parent=CGI_10026232;
	scaffold867	WUBlastX	LINE_R2	494887	494913	22	+	.	.
scaffold867	subtractBed	intrn	520568	520619	.	-	.	Parent=CGI_10026233;
	scaffold867	TRF	Tandem_Repeat	520568	520619	104	+	.	.
scaffold867	subtractBed	intrn	631786	631833	.	+	.	Parent=CGI_10026235;
	scaffold867	TRF	Tandem_Repeat	631786	631833	55	+	.	.
scaffold867	subtractBed	intrn	633549	633723	.	+	.	Parent=CGI_10026235;
	scaffold867	TRF	Tandem_Repeat	633549	633723	251	+	.	.
scaffold867	subtractBed	intrn	760924	761007	.	+	.	Parent=CGI_10026240;
	scaffold867	TRF	Tandem_Repeat	760924	761007	96	+	.	.
scaffold867	subtractBed	intrn	770531	770690	.	+	.	Parent=CGI_10026240;
	scaffold867	TRF	Tandem_Repeat	770531	770690	113	+	.	.
scaffold867	subtractBed	intrn	770533	770686	.	+	.	Parent=CGI_10026240;
	scaffold867	TRF	Tandem_Repeat	770533	770686	209	+	.	.
scaffold867	subtractBed	intrn	777394	777548	.	+	.	Parent=CGI_10026240;
	scaffold867	TRF	Tandem_Repeat	777394	777548	224	+	.	.
scaffold867	subtractBed	intrn	777674	777741	.	+	.	Parent=CGI_10026240;
	scaffold867	TRF	Tandem_Repeat	777674	777741	136	+	.	.
scaffold867	subtractBed	intrn	883280	883438	.	-	.	Parent=CGI_10026241;
	scaffold867	WUBlastX	LTR_Gypsy	883280	883438	31	+	.	.
scaffold867	subtractBed	intrn	883280	883438	.	+	.	Parent=CGI_10026242;
	scaffold867	WUBlastX	LTR_Gypsy	883280	883438	31	+	.	.
scaffold867	subtractBed	intrn	884682	884837	.	+	.	Parent=CGI_10026242;
	scaffold867	WUBlastX	LTR_Gypsy	884682	884837	32	+	.	.
scaffold867	subtractBed	intrn	887477	887663	.	-	.	Parent=CGI_10026243;
	scaffold867	TRF	Tandem_Repeat	887477	887663	90	+	.	.
scaffold867	subtractBed	intrn	891582	892293	.	-	.	Parent=CGI_10026243;
	scaffold867	TRF	Tandem_Repeat	891582	892293	895	+	.	.
scaffold867	subtractBed	intrn	904274	904309	.	-	.	Parent=CGI_10026243;
	scaffold867	TRF	Tandem_Repeat	904274	904309	72	+	.	.
scaffold867	subtractBed	intrn	904274	904309	.	+	.	Parent=CGI_10026244;
	scaffold867	TRF	Tandem_Repeat	904274	904309	72	+	.	.
scaffold867	subtractBed	intrn	913065	913101	.	-	.	Parent=CGI_10026245;
	scaffold867	TRF	Tandem_Repeat	913065	913101	74	+	.	.
scaffold867	subtractBed	intrn	958213	958619	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	958213	958619	211	+	.	.
scaffold867	subtractBed	intrn	958212	958600	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	958212	958600	390	+	.	.
scaffold867	subtractBed	intrn	958250	958600	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	958250	958600	305	+	.	.
scaffold867	subtractBed	intrn	958202	958619	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	958202	958619	291	+	.	.
scaffold867	subtractBed	intrn	959452	959724	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	959452	959724	287	+	.	.
scaffold867	subtractBed	intrn	959452	959678	.	-	.	Parent=CGI_10026247;
	scaffold867	TRF	Tandem_Repeat	959452	959678	180	+	.	.
scaffold867	subtractBed	intrn	970634	970842	.	-	.	Parent=CGI_10026249;
	scaffold867	TRF	Tandem_Repeat	970634	970842	241	+	.	.
scaffold867	subtractBed	intrn	972816	973023	.	-	.	Parent=CGI_10026249;
	scaffold867	TRF	Tandem_Repeat	972816	973023	353	+	.	.
scaffold867	subtractBed	intrn	979720	979878	.	-	.	Parent=CGI_10026251;
	scaffold867	TRF	Tandem_Repeat	979720	979878	291	+	.	.
scaffold867	subtractBed	intrn	979720	980044	.	-	.	Parent=CGI_10026251;
	scaffold867	TRF	Tandem_Repeat	979720	980044	469	+	.	.
scaffold867	subtractBed	intrn	979720	980044	.	-	.	Parent=CGI_10026251;
	scaffold867	TRF	Tandem_Repeat	979720	980044	469	+	.	.
scaffold867	subtractBed	intrn	979878	980044	.	-	.	Parent=CGI_10026251;
	scaffold867	TRF	Tandem_Repeat	979878	980044	241	+	.	.
scaffold867	subtractBed	intrn	991563	991596	.	-	.	Parent=CGI_10026252;
	scaffold867	TRF	Tandem_Repeat	991563	991596	68	+	.	.
scaffold867	subtractBed	intrn	997523	997567	.	+	.	Parent=CGI_10026253;
	scaffold867	TRF	Tandem_Repeat	997523	997567	72	+	.	.
scaffold867	subtractBed	intrn	997523	997570	.	+	.	Parent=CGI_10026253;
	scaffold867	TRF	Tandem_Repeat	997523	997570	51	+	.	.
scaffold867	subtractBed	intrn	998091	998270	.	+	.	Parent=CGI_10026253;
	scaffold867	TRF	Tandem_Repeat	998091	998270	168	+	.	.
scaffold867	subtractBed	intrn	1035302	1035349	.	-	.	Parent=CGI_10026257;
	scaffold867	TRF	Tandem_Repeat	1035302	1035349	78	+	.	.
scaffold867	subtractBed	intrn	1036968	1036994	.	-	.	Parent=CGI_10026257;
	scaffold867	TRF	Tandem_Repeat	1036968	1036994	54	+	.	.
scaffold867	subtractBed	intrn	1039474	1041526	.	+	.	Parent=CGI_10026258;
	scaffold867	TRF	Tandem_Repeat	1039474	1041526	2245	+	.	.
scaffold867	subtractBed	intrn	1053620	1054875	.	+	.	Parent=CGI_10026258;
	scaffold867	TRF	Tandem_Repeat	1053620	1054875	1679	+	.	.
scaffold867	subtractBed	intrn	1081354	1081404	.	+	.	Parent=CGI_10026261;
	scaffold867	TRF	Tandem_Repeat	1081354	1081404	102	+	.	.
scaffold867	subtractBed	intrn	1135664	1135930	.	-	.	Parent=CGI_10026263;
	scaffold867	WUBlastX	LINE_RTE-BovB	1135664	1135930	115	+	.	.
scaffold867	subtractBed	intrn	1140144	1140175	.	-	.	Parent=CGI_10026264;
	scaffold867	TRF	Tandem_Repeat	1140144	1140175	64	+	.	.
scaffold867	subtractBed	intrn	1154300	1156224	.	+	.	Parent=CGI_10026265;
	scaffold867	TRF	Tandem_Repeat	1154300	1156224	2357	+	.	.
scaffold868	subtractBed	intrn	11488	11521	.	+	.	Parent=CGI_10006353;
	scaffold868	TRF	Tandem_Repeat	11488	11521	68	+	.	.
scaffold868	subtractBed	intrn	11519	11555	.	+	.	Parent=CGI_10006353;
	scaffold868	TRF	Tandem_Repeat	11519	11555	74	+	.	.
scaffold868	subtractBed	intrn	11607	11636	.	+	.	Parent=CGI_10006353;
	scaffold868	TRF	Tandem_Repeat	11607	11636	60	+	.	.
scaffold868	subtractBed	intrn	49630	49691	.	-	.	Parent=CGI_10006356;
	scaffold868	TRF	Tandem_Repeat	49630	49691	117	+	.	.
scaffold868	subtractBed	intrn	58495	59142	.	-	.	Parent=CGI_10006358;
	scaffold868	TRF	Tandem_Repeat	58495	59142	888	+	.	.
scaffold868	subtractBed	intrn	93312	94011	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	93312	94011	869	+	.	.
scaffold868	subtractBed	intrn	94022	94076	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	94022	94076	92	+	.	.
scaffold868	subtractBed	intrn	94015	94077	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	94015	94077	81	+	.	.
scaffold868	subtractBed	intrn	95858	96607	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	95858	96607	1279	+	.	.
scaffold868	subtractBed	intrn	106993	107575	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	106993	107575	380	+	.	.
scaffold868	subtractBed	intrn	107057	107552	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	107057	107552	437	+	.	.
scaffold868	subtractBed	intrn	108142	108233	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	108142	108233	105	+	.	.
scaffold868	subtractBed	intrn	108592	108631	.	-	.	Parent=CGI_10006359;
	scaffold868	TRF	Tandem_Repeat	108592	108631	62	+	.	.
scaffold870	subtractBed	intrn	47587	47710	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	47456	47710	102	+	.	.
scaffold870	subtractBed	intrn	47879	47879	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	47739	47879	61	+	.	.
scaffold870	subtractBed	intrn	48315	48317	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	48117	48317	143	+	.	.
scaffold870	subtractBed	intrn	48777	48790	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	48777	48923	73	+	.	.
scaffold870	subtractBed	intrn	48667	48700	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	48506	48700	57	+	.	.
scaffold870	subtractBed	intrn	48928	49019	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	48885	49019	20	+	.	.
scaffold870	subtractBed	intrn	49162	49165	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49162	49272	46	+	.	.
scaffold870	subtractBed	intrn	49117	49165	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49117	49275	38	+	.	.
scaffold870	subtractBed	intrn	49379	49433	.	+	.	Parent=CGI_10007493;
	scaffold870	TRF	Tandem_Repeat	49379	49433	110	+	.	.
scaffold870	subtractBed	intrn	49590	49590	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49590	49703	79	+	.	.
scaffold870	subtractBed	intrn	49274	49275	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49117	49275	38	+	.	.
scaffold870	subtractBed	intrn	49901	49902	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49901	50056	52	+	.	.
scaffold870	subtractBed	intrn	50008	50056	.	+	.	Parent=CGI_10007493;
	scaffold870	WUBlastX	DNA_hAT	49901	50056	52	+	.	.
scaffold870	subtractBed	intrn	140599	141330	.	+	.	Parent=CGI_10007496;
	scaffold870	WUBlastX	LTR_Gypsy	140599	141330	267	-	.	.
scaffold870	subtractBed	intrn	140458	141402	.	+	.	Parent=CGI_10007496;
	scaffold870	WUBlastX	LTR_Gypsy	140458	141402	223	-	.	.
scaffold870	subtractBed	intrn	149909	149933	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	149909	149933	50	+	.	.
scaffold870	subtractBed	intrn	154255	154300	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	154255	154300	76	+	.	.
scaffold870	subtractBed	intrn	154250	154303	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	154250	154303	76	+	.	.
scaffold870	subtractBed	intrn	155651	155694	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	155651	155694	88	+	.	.
scaffold870	subtractBed	intrn	160754	160800	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	160754	160800	94	+	.	.
scaffold870	subtractBed	intrn	162876	162931	.	+	.	Parent=CGI_10007496;
	scaffold870	TRF	Tandem_Repeat	162876	162931	112	+	.	.
scaffold873	subtractBed	intrn	6689	6800	.	-	.	Parent=CGI_10014412;
	scaffold873	TRF	Tandem_Repeat	6689	6800	163	+	.	.
scaffold873	subtractBed	intrn	6689	6800	.	+	.	Parent=CGI_10014413;
	scaffold873	TRF	Tandem_Repeat	6689	6800	163	+	.	.
scaffold873	subtractBed	intrn	28794	28917	.	+	.	Parent=CGI_10014414;
	scaffold873	TRF	Tandem_Repeat	28794	28917	137	+	.	.
scaffold873	subtractBed	intrn	28783	28916	.	+	.	Parent=CGI_10014414;
	scaffold873	TRF	Tandem_Repeat	28783	28916	148	+	.	.
scaffold873	subtractBed	intrn	120948	121034	.	+	.	Parent=CGI_10014417;
	scaffold873	TRF	Tandem_Repeat	120948	121034	79	+	.	.
scaffold873	subtractBed	intrn	121064	121222	.	+	.	Parent=CGI_10014417;
	scaffold873	TRF	Tandem_Repeat	121064	121222	135	+	.	.
scaffold873	subtractBed	intrn	121222	121387	.	+	.	Parent=CGI_10014417;
	scaffold873	TRF	Tandem_Repeat	121222	121387	167	+	.	.
scaffold873	subtractBed	intrn	129849	129884	.	+	.	Parent=CGI_10014417;
	scaffold873	TRF	Tandem_Repeat	129849	129884	72	+	.	.
scaffold873	subtractBed	intrn	136241	136465	.	+	.	Parent=CGI_10014419;
	scaffold873	TRF	Tandem_Repeat	136241	136465	124	+	.	.
scaffold873	subtractBed	intrn	136745	136848	.	+	.	Parent=CGI_10014419;
	scaffold873	TRF	Tandem_Repeat	136745	136848	100	+	.	.
scaffold873	subtractBed	intrn	137152	137280	.	+	.	Parent=CGI_10014419;
	scaffold873	TRF	Tandem_Repeat	137152	137280	100	+	.	.
scaffold873	subtractBed	intrn	144374	144411	.	+	.	Parent=CGI_10014419;
	scaffold873	TRF	Tandem_Repeat	144374	144424	102	+	.	.
scaffold873	subtractBed	intrn	183357	183395	.	+	.	Parent=CGI_10014421;
	scaffold873	TRF	Tandem_Repeat	183357	183395	71	+	.	.
scaffold873	subtractBed	intrn	231620	231802	.	+	.	Parent=CGI_10014424;
	scaffold873	WUBlastX	DNA_Harbinger	231620	231802	56	+	.	.
scaffold873	subtractBed	intrn	277915	277984	.	+	.	Parent=CGI_10014425;
	scaffold873	TRF	Tandem_Repeat	277915	277984	61	+	.	.
scaffold873	subtractBed	intrn	277924	277992	.	+	.	Parent=CGI_10014425;
	scaffold873	TRF	Tandem_Repeat	277924	277992	54	+	.	.
scaffold873	subtractBed	intrn	304742	304788	.	+	.	Parent=CGI_10014429;
	scaffold873	TRF	Tandem_Repeat	304742	304788	94	+	.	.
scaffold873	subtractBed	intrn	311517	311786	.	+	.	Parent=CGI_10014430;
	scaffold873	TRF	Tandem_Repeat	311517	311786	400	+	.	.
scaffold873	subtractBed	intrn	311850	311961	.	+	.	Parent=CGI_10014430;
	scaffold873	TRF	Tandem_Repeat	311850	311961	103	+	.	.
scaffold873	subtractBed	intrn	328551	328705	.	+	.	Parent=CGI_10014432;
	scaffold873	TRF	Tandem_Repeat	328551	328705	154	+	.	.
scaffold873	subtractBed	intrn	370353	370381	.	+	.	Parent=CGI_10014438;
	scaffold873	WUBlastX	LINE_Proto2	370094	370381	77	-	.	.
scaffold873	subtractBed	intrn	382128	382327	.	+	.	Parent=CGI_10014439;
	scaffold873	TRF	Tandem_Repeat	382128	382327	219	+	.	.
scaffold873	subtractBed	intrn	387632	387667	.	-	.	Parent=CGI_10014440;
	scaffold873	TRF	Tandem_Repeat	387632	387667	72	+	.	.
scaffold879	subtractBed	intrn	84182	84211	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	84182	84211	51	+	.	.
scaffold879	subtractBed	intrn	95470	97410	.	-	.	Parent=CGI_10007573;
	scaffold879	WUBlastX	LINE_RTE-BovB	95470	97410	1677	+	.	.
scaffold879	subtractBed	intrn	101305	101359	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	101305	101359	110	+	.	.
scaffold879	subtractBed	intrn	107028	107058	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	107028	107058	62	+	.	.
scaffold879	subtractBed	intrn	107917	107974	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	107917	107974	64	+	.	.
scaffold879	subtractBed	intrn	107914	107975	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	107914	107975	72	+	.	.
scaffold879	subtractBed	intrn	116716	116774	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	116716	116774	118	+	.	.
scaffold879	subtractBed	intrn	123108	123161	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	123108	123161	99	+	.	.
scaffold879	subtractBed	intrn	124665	124732	.	-	.	Parent=CGI_10007573;
	scaffold879	TRF	Tandem_Repeat	124665	124732	127	+	.	.
scaffold88	subtractBed	intrn	8381	8514	.	+	.	Parent=CGI_10011114;
	scaffold88	TRF	Tandem_Repeat	8381	8514	223	+	.	.
scaffold88	subtractBed	intrn	5609	5904	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	5569	5904	39	+	.	.
scaffold88	subtractBed	intrn	5680	5856	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	5680	5856	58	+	.	.
scaffold88	subtractBed	intrn	5647	5862	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	5647	5862	56	+	.	.
scaffold88	subtractBed	intrn	8050	8151	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	8050	8151	28	+	.	.
scaffold88	subtractBed	intrn	6003	6401	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	6003	6401	101	+	.	.
scaffold88	subtractBed	intrn	6380	6748	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	6380	6748	113	+	.	.
scaffold88	subtractBed	intrn	5650	5964	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	5650	5964	53	+	.	.
scaffold88	subtractBed	intrn	7832	7924	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_hAT-Tip100	7832	7924	30	+	.	.
scaffold88	subtractBed	intrn	17351	17387	.	+	.	Parent=CGI_10011114;
	scaffold88	TRF	Tandem_Repeat	17351	17387	74	+	.	.
scaffold88	subtractBed	intrn	18330	19220	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_TcMar-Tc1	18330	19220	388	-	.	.
scaffold88	subtractBed	intrn	19238	19369	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_TcMar-Tc1	19238	19369	37	-	.	.
scaffold88	subtractBed	intrn	19238	19399	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	DNA_TcMar-Marin	19238	19399	35	-	.	.
scaffold88	subtractBed	intrn	23524	24081	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1-Tx1	23524	24081	36	-	.	.
scaffold88	subtractBed	intrn	23073	23507	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1	23073	23507	32	-	.	.
scaffold88	subtractBed	intrn	25372	26298	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1	25372	26298	307	-	.	.
scaffold88	subtractBed	intrn	26382	26696	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1	26382	26696	63	-	.	.
scaffold88	subtractBed	intrn	23145	23516	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1-Tx1	23145	23516	51	-	.	.
scaffold88	subtractBed	intrn	24134	24529	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1-Tx1	24134	24529	143	-	.	.
scaffold88	subtractBed	intrn	26382	26603	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1	26382	26603	87	-	.	.
scaffold88	subtractBed	intrn	25561	26424	.	+	.	Parent=CGI_10011114;
	scaffold88	WUBlastX	LINE_L1	25561	26424	579	-	.	.
scaffold88	subtractBed	intrn	23524	24081	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1-Tx1	23524	24081	36	-	.	.
scaffold88	subtractBed	intrn	23073	23507	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1	23073	23507	32	-	.	.
scaffold88	subtractBed	intrn	25372	26298	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1	25372	26298	307	-	.	.
scaffold88	subtractBed	intrn	26382	26696	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1	26382	26696	63	-	.	.
scaffold88	subtractBed	intrn	23145	23516	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1-Tx1	23145	23516	51	-	.	.
scaffold88	subtractBed	intrn	24134	24529	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1-Tx1	24134	24529	143	-	.	.
scaffold88	subtractBed	intrn	26382	26603	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1	26382	26603	87	-	.	.
scaffold88	subtractBed	intrn	25561	26424	.	-	.	Parent=CGI_10011115;
	scaffold88	WUBlastX	LINE_L1	25561	26424	579	-	.	.
scaffold88	subtractBed	intrn	111394	111438	.	-	.	Parent=CGI_10011118;
	scaffold88	TRF	Tandem_Repeat	111394	111438	90	+	.	.
scaffold88	subtractBed	intrn	115341	115529	.	-	.	Parent=CGI_10011119;
	scaffold88	TRF	Tandem_Repeat	115341	115529	141	+	.	.
scaffold88	subtractBed	intrn	245251	245305	.	-	.	Parent=CGI_10011122;
	scaffold88	TRF	Tandem_Repeat	245251	245305	110	+	.	.
scaffold880	subtractBed	intrn	12637	12665	.	+	.	Parent=CGI_10022176;
	scaffold880	TRF	Tandem_Repeat	12637	12665	58	+	.	.
scaffold880	subtractBed	intrn	62817	63383	.	+	.	Parent=CGI_10022178;
	scaffold880	TRF	Tandem_Repeat	62817	63383	981	+	.	.
scaffold880	subtractBed	intrn	91701	92423	.	+	.	Parent=CGI_10022181;
	scaffold880	WUBlastX	LINE_Penelope	91701	92423	60	+	.	.
scaffold880	subtractBed	intrn	91701	92102	.	+	.	Parent=CGI_10022181;
	scaffold880	WUBlastX	LINE_Penelope	91701	92102	126	+	.	.
scaffold880	subtractBed	intrn	91634	91684	.	+	.	Parent=CGI_10022181;
	scaffold880	WUBlastX	LINE_Penelope	91634	91684	37	+	.	.
scaffold880	subtractBed	intrn	161912	161946	.	-	.	Parent=CGI_10022184;
	scaffold880	TRF	Tandem_Repeat	161912	161946	70	+	.	.
scaffold880	subtractBed	intrn	163589	163655	.	-	.	Parent=CGI_10022184;
	scaffold880	TRF	Tandem_Repeat	163589	163655	57	+	.	.
scaffold880	subtractBed	intrn	174580	174642	.	-	.	Parent=CGI_10022184;
	scaffold880	TRF	Tandem_Repeat	174580	174642	126	+	.	.
scaffold880	subtractBed	intrn	213162	213201	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	213162	213201	80	+	.	.
scaffold880	subtractBed	intrn	214227	214281	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	214227	214281	101	+	.	.
scaffold880	subtractBed	intrn	218203	218267	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	218203	218267	112	+	.	.
scaffold880	subtractBed	intrn	233595	233763	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	233595	233763	92	+	.	.
scaffold880	subtractBed	intrn	233939	234070	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	233939	234070	176	+	.	.
scaffold880	subtractBed	intrn	234142	234298	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	234142	234298	100	+	.	.
scaffold880	subtractBed	intrn	243510	243536	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	243510	243536	54	+	.	.
scaffold880	subtractBed	intrn	245799	245840	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	245799	245840	84	+	.	.
scaffold880	subtractBed	intrn	245931	245962	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	245931	245962	64	+	.	.
scaffold880	subtractBed	intrn	248387	248537	.	-	.	Parent=CGI_10022185;
	scaffold880	TRF	Tandem_Repeat	248387	248537	275	+	.	.
scaffold880	subtractBed	intrn	304322	304362	.	-	.	Parent=CGI_10022190;
	scaffold880	TRF	Tandem_Repeat	304322	304362	82	+	.	.
scaffold880	subtractBed	intrn	305247	305867	.	-	.	Parent=CGI_10022190;
	scaffold880	TRF	Tandem_Repeat	305247	305867	408	+	.	.
scaffold880	subtractBed	intrn	312432	313120	.	-	.	Parent=CGI_10022191;
	scaffold880	TRF	Tandem_Repeat	312432	313120	606	+	.	.
scaffold880	subtractBed	intrn	312413	313120	.	-	.	Parent=CGI_10022191;
	scaffold880	TRF	Tandem_Repeat	312413	313120	745	+	.	.
scaffold880	subtractBed	intrn	313010	313099	.	-	.	Parent=CGI_10022191;
	scaffold880	TRF	Tandem_Repeat	313010	313099	60	+	.	.
scaffold880	subtractBed	intrn	316030	316121	.	-	.	Parent=CGI_10022191;
	scaffold880	TRF	Tandem_Repeat	316030	316121	175	+	.	.
scaffold880	subtractBed	intrn	317211	317537	.	-	.	Parent=CGI_10022191;
	scaffold880	TRF	Tandem_Repeat	317211	317537	476	+	.	.
scaffold880	subtractBed	intrn	337859	338282	.	+	.	Parent=CGI_10022192;
	scaffold880	TRF	Tandem_Repeat	337859	338282	468	+	.	.
scaffold880	subtractBed	intrn	337868	338286	.	+	.	Parent=CGI_10022192;
	scaffold880	TRF	Tandem_Repeat	337868	338286	533	+	.	.
scaffold880	subtractBed	intrn	337868	338286	.	+	.	Parent=CGI_10022192;
	scaffold880	TRF	Tandem_Repeat	337868	338286	570	+	.	.
scaffold880	subtractBed	intrn	341737	342016	.	+	.	Parent=CGI_10022192;
	scaffold880	TRF	Tandem_Repeat	341737	342016	292	+	.	.
scaffold880	subtractBed	intrn	341737	342016	.	+	.	Parent=CGI_10022192;
	scaffold880	TRF	Tandem_Repeat	341737	342016	327	+	.	.
scaffold880	subtractBed	intrn	410891	412698	.	+	.	Parent=CGI_10022195;
	scaffold880	TRF	Tandem_Repeat	410891	412698	1964	+	.	.
scaffold880	subtractBed	intrn	411651	411713	.	+	.	Parent=CGI_10022195;
	scaffold880	TRF	Tandem_Repeat	411651	411713	90	+	.	.
scaffold880	subtractBed	intrn	411650	411709	.	+	.	Parent=CGI_10022195;
	scaffold880	TRF	Tandem_Repeat	411650	411709	66	+	.	.
scaffold880	subtractBed	intrn	492009	492189	.	-	.	Parent=CGI_10022196;
	scaffold880	TRF	Tandem_Repeat	492009	492189	173	+	.	.
scaffold880	subtractBed	intrn	492217	492327	.	-	.	Parent=CGI_10022196;
	scaffold880	TRF	Tandem_Repeat	492217	492327	105	+	.	.
scaffold880	subtractBed	intrn	511725	512039	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	511725	512039	28	+	.	.
scaffold880	subtractBed	intrn	512023	512397	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	512023	512397	110	+	.	.
scaffold880	subtractBed	intrn	511785	512042	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	511785	512042	45	+	.	.
scaffold880	subtractBed	intrn	512080	512487	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	512080	512487	121	+	.	.
scaffold880	subtractBed	intrn	512080	512406	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	512080	512406	133	+	.	.
scaffold880	subtractBed	intrn	511860	512039	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	511860	512039	77	+	.	.
scaffold880	subtractBed	intrn	511960	512376	.	-	.	Parent=CGI_10022196;
	scaffold880	WUBlastX	LTR_Gypsy	511960	512376	102	+	.	.
scaffold880	subtractBed	intrn	521421	521421	.	-	.	Parent=CGI_10022198;
	scaffold880	WUBlastX	DNA_Harbinger	521305	521421	32	-	.	.
scaffold880	subtractBed	intrn	523883	523972	.	+	.	Parent=CGI_10022199;
	scaffold880	TRF	Tandem_Repeat	523883	523972	144	+	.	.
scaffold880	subtractBed	intrn	529873	529877	.	+	.	Parent=CGI_10022199;
	scaffold880	WUBlastX	DNA_Crypton	529873	530130	96	+	.	.
scaffold880	subtractBed	intrn	533760	533957	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Gypsy	533760	533957	36	-	.	.
scaffold880	subtractBed	intrn	534070	534117	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Gypsy	534070	534117	31	-	.	.
scaffold880	subtractBed	intrn	534128	534214	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Gypsy	534128	534214	31	-	.	.
scaffold880	subtractBed	intrn	533542	533649	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Gypsy	533542	533649	29	-	.	.
scaffold880	subtractBed	intrn	540983	541031	.	-	.	Parent=CGI_10022201;
	scaffold880	TRF	Tandem_Repeat	540983	541031	98	+	.	.
scaffold880	subtractBed	intrn	544099	544439	.	-	.	Parent=CGI_10022201;
	scaffold880	TRF	Tandem_Repeat	544099	544439	542	+	.	.
scaffold880	subtractBed	intrn	544186	544389	.	-	.	Parent=CGI_10022201;
	scaffold880	TRF	Tandem_Repeat	544186	544389	94	+	.	.
scaffold880	subtractBed	intrn	545471	547003	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Ngaro	545471	547003	977	-	.	.
scaffold880	subtractBed	intrn	544548	545492	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Ngaro	544548	545492	365	-	.	.
scaffold880	subtractBed	intrn	547038	547493	.	-	.	Parent=CGI_10022201;
	scaffold880	WUBlastX	LTR_Ngaro	547038	547493	70	-	.	.
scaffold880	subtractBed	intrn	553705	553734	.	-	.	Parent=CGI_10022201;
	scaffold880	TRF	Tandem_Repeat	553705	553734	51	+	.	.
scaffold880	subtractBed	intrn	558175	558208	.	-	.	Parent=CGI_10022201;
	scaffold880	TRF	Tandem_Repeat	558175	558208	68	+	.	.
scaffold880	subtractBed	intrn	617864	617929	.	-	.	Parent=CGI_10022203;
	scaffold880	TRF	Tandem_Repeat	617864	617929	114	+	.	.
scaffold880	subtractBed	intrn	617385	617385	.	-	.	Parent=CGI_10022203;
	scaffold880	WUBlastX	DNA_Kolobok-Hyd	617128	617385	37	-	.	.
scaffold880	subtractBed	intrn	619296	619349	.	-	.	Parent=CGI_10022203;
	scaffold880	TRF	Tandem_Repeat	619296	619349	108	+	.	.
scaffold880	subtractBed	intrn	673937	674137	.	-	.	Parent=CGI_10022204;
	scaffold880	WUBlastX	DNA_Kolobok	673937	674137	46	-	.	.
scaffold880	subtractBed	intrn	674236	674484	.	-	.	Parent=CGI_10022204;
	scaffold880	WUBlastX	DNA_Kolobok	674236	674484	141	-	.	.
scaffold880	subtractBed	intrn	674000	674146	.	-	.	Parent=CGI_10022204;
	scaffold880	WUBlastX	DNA_Kolobok	674000	674146	59	-	.	.
scaffold880	subtractBed	intrn	674610	674891	.	-	.	Parent=CGI_10022204;
	scaffold880	WUBlastX	DNA_Kolobok	674610	674891	96	-	.	.
scaffold880	subtractBed	intrn	682719	682772	.	-	.	Parent=CGI_10022204;
	scaffold880	TRF	Tandem_Repeat	682719	682772	108	+	.	.
scaffold880	subtractBed	intrn	682844	684180	.	-	.	Parent=CGI_10022204;
	scaffold880	TRF	Tandem_Repeat	682844	684180	1466	+	.	.
scaffold885	subtractBed	intrn	3214	3255	.	-	.	Parent=CGI_10025183;
	scaffold885	TRF	Tandem_Repeat	3214	3255	84	+	.	.
scaffold885	subtractBed	intrn	5517	5602	.	-	.	Parent=CGI_10025183;
	scaffold885	TRF	Tandem_Repeat	5517	5602	86	+	.	.
scaffold885	subtractBed	intrn	8487	8520	.	-	.	Parent=CGI_10025183;
	scaffold885	TRF	Tandem_Repeat	8487	8520	52	+	.	.
scaffold885	subtractBed	intrn	12883	12933	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	12883	13128	105	+	.	.
scaffold885	subtractBed	intrn	12557	12691	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	12557	12691	23	+	.	.
scaffold885	subtractBed	intrn	12602	12733	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	12602	12733	24	+	.	.
scaffold885	subtractBed	intrn	13765	14010	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	13765	14010	136	-	.	.
scaffold885	subtractBed	intrn	14164	14164	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	14164	14334	58	-	.	.
scaffold885	subtractBed	intrn	14330	14334	.	-	.	Parent=CGI_10025184;
	scaffold885	WUBlastX	DNA_Kolobok	14164	14334	58	-	.	.
scaffold885	subtractBed	intrn	37557	37780	.	-	.	Parent=CGI_10025187;
	scaffold885	TRF	Tandem_Repeat	37557	37780	412	+	.	.
scaffold885	subtractBed	intrn	99817	99848	.	+	.	Parent=CGI_10025191;
	scaffold885	TRF	Tandem_Repeat	99817	99848	64	+	.	.
scaffold885	subtractBed	intrn	310227	310267	.	-	.	Parent=CGI_10025198;
	scaffold885	TRF	Tandem_Repeat	310227	310267	82	+	.	.
scaffold885	subtractBed	intrn	310694	310742	.	-	.	Parent=CGI_10025198;
	scaffold885	TRF	Tandem_Repeat	310694	310742	98	+	.	.
scaffold885	subtractBed	intrn	402352	402402	.	-	.	Parent=CGI_10025202;
	scaffold885	TRF	Tandem_Repeat	402352	402402	102	+	.	.
scaffold885	subtractBed	intrn	417400	417451	.	+	.	Parent=CGI_10025204;
	scaffold885	TRF	Tandem_Repeat	417400	417451	104	+	.	.
scaffold885	subtractBed	intrn	461829	461892	.	-	.	Parent=CGI_10025206;
	scaffold885	TRF	Tandem_Repeat	461829	461892	128	+	.	.
scaffold885	subtractBed	intrn	463068	463128	.	-	.	Parent=CGI_10025206;
	scaffold885	TRF	Tandem_Repeat	463068	463128	99	+	.	.
scaffold885	subtractBed	intrn	463068	463128	.	+	.	Parent=CGI_10025207;
	scaffold885	TRF	Tandem_Repeat	463068	463128	99	+	.	.
scaffold885	subtractBed	intrn	470799	470862	.	+	.	Parent=CGI_10025207;
	scaffold885	TRF	Tandem_Repeat	470799	470862	121	+	.	.
scaffold885	subtractBed	intrn	477224	477274	.	-	.	Parent=CGI_10025208;
	scaffold885	TRF	Tandem_Repeat	477224	477274	77	+	.	.
scaffold885	subtractBed	intrn	487625	487695	.	-	.	Parent=CGI_10025208;
	scaffold885	TRF	Tandem_Repeat	487625	487695	63	+	.	.
scaffold885	subtractBed	intrn	505655	505691	.	+	.	Parent=CGI_10025210;
	scaffold885	TRF	Tandem_Repeat	505655	505691	74	+	.	.
scaffold885	subtractBed	intrn	503297	503725	.	+	.	Parent=CGI_10025210;
	scaffold885	WUBlastX	LINE_RTE-BovB	503297	503725	39	+	.	.
scaffold885	subtractBed	intrn	503573	503725	.	+	.	Parent=CGI_10025210;
	scaffold885	WUBlastX	LINE_RTE-BovB	503573	503725	73	+	.	.
scaffold885	subtractBed	intrn	505041	505181	.	+	.	Parent=CGI_10025210;
	scaffold885	WUBlastX	LINE_RTE-BovB	505041	505181	68	+	.	.
scaffold885	subtractBed	intrn	504954	505181	.	+	.	Parent=CGI_10025210;
	scaffold885	WUBlastX	LINE_RTE-BovB	504954	505181	66	+	.	.
scaffold885	subtractBed	intrn	518670	518715	.	+	.	Parent=CGI_10025211;
	scaffold885	TRF	Tandem_Repeat	518670	518715	83	+	.	.
scaffold885	subtractBed	intrn	518920	519841	.	+	.	Parent=CGI_10025211;
	scaffold885	TRF	Tandem_Repeat	518920	519841	1347	+	.	.
scaffold885	subtractBed	intrn	527549	527601	.	-	.	Parent=CGI_10025212;
	scaffold885	TRF	Tandem_Repeat	527549	527601	106	+	.	.
scaffold885	subtractBed	intrn	529111	529148	.	-	.	Parent=CGI_10025212;
	scaffold885	TRF	Tandem_Repeat	529111	529148	76	+	.	.
scaffold885	subtractBed	intrn	763496	763764	.	+	.	Parent=CGI_10025221;
	scaffold885	TRF	Tandem_Repeat	763486	763764	404	+	.	.
scaffold885	subtractBed	intrn	782115	782149	.	-	.	Parent=CGI_10025222;
	scaffold885	TRF	Tandem_Repeat	782115	782149	70	+	.	.
scaffold885	subtractBed	intrn	976490	976646	.	+	.	Parent=CGI_10025232;
	scaffold885	TRF	Tandem_Repeat	976490	976646	314	+	.	.
scaffold885	subtractBed	intrn	977322	977657	.	+	.	Parent=CGI_10025232;
	scaffold885	TRF	Tandem_Repeat	977322	977657	347	+	.	.
scaffold885	subtractBed	intrn	980142	980200	.	+	.	Parent=CGI_10025232;
	scaffold885	TRF	Tandem_Repeat	980142	980200	118	+	.	.
scaffold885	subtractBed	intrn	980868	981035	.	+	.	Parent=CGI_10025232;
	scaffold885	WUBlastX	LTR_Ngaro	980868	981035	78	-	.	.
scaffold885	subtractBed	intrn	991090	991120	.	+	.	Parent=CGI_10025233;
	scaffold885	TRF	Tandem_Repeat	991090	991120	62	+	.	.
scaffold885	subtractBed	intrn	993609	993755	.	+	.	Parent=CGI_10025233;
	scaffold885	WUBlastX	DNA_Zator	993609	993755	69	-	.	.
scaffold885	subtractBed	intrn	1010670	1011041	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LINE_L1-Tx1	1010670	1011041	41	+	.	.
scaffold885	subtractBed	intrn	1010516	1010851	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LINE_L1-Tx1	1010516	1010851	198	+	.	.
scaffold885	subtractBed	intrn	1011058	1011726	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LINE_L1	1011058	1011726	258	+	.	.
scaffold885	subtractBed	intrn	1011064	1011912	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LINE_L1	1011064	1011912	154	+	.	.
scaffold885	subtractBed	intrn	1017665	1018054	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017665	1018054	44	+	.	.
scaffold885	subtractBed	intrn	1017265	1017687	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017265	1017687	44	+	.	.
scaffold885	subtractBed	intrn	1017481	1017660	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017481	1017660	62	+	.	.
scaffold885	subtractBed	intrn	1017484	1017717	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017484	1017717	51	+	.	.
scaffold885	subtractBed	intrn	1017448	1017633	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017448	1017633	55	+	.	.
scaffold885	subtractBed	intrn	1018461	1018628	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1018461	1018628	83	+	.	.
scaffold885	subtractBed	intrn	1017665	1018270	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1017665	1018270	40	+	.	.
scaffold885	subtractBed	intrn	1018461	1018748	.	-	.	Parent=CGI_10025234;
	scaffold885	WUBlastX	LTR_DIRS	1018461	1018748	54	+	.	.
scaffold885	subtractBed	intrn	1025348	1026058	.	-	.	Parent=CGI_10025234;
	scaffold885	TRF	Tandem_Repeat	1025348	1026058	1005	+	.	.
scaffold885	subtractBed	intrn	1034440	1034481	.	-	.	Parent=CGI_10025234;
	scaffold885	TRF	Tandem_Repeat	1034440	1034481	84	+	.	.
scaffold888	subtractBed	intrn	77165	77639	.	+	.	Parent=CGI_10013442;
	scaffold888	TRF	Tandem_Repeat	77165	77639	699	+	.	.
scaffold888	subtractBed	intrn	221623	222562	.	+	.	Parent=CGI_10013454;
	scaffold888	TRF	Tandem_Repeat	221623	222562	611	+	.	.
scaffold888	subtractBed	intrn	221713	221862	.	+	.	Parent=CGI_10013454;
	scaffold888	TRF	Tandem_Repeat	221713	221862	138	+	.	.
scaffold888	subtractBed	intrn	222711	222770	.	+	.	Parent=CGI_10013454;
	scaffold888	TRF	Tandem_Repeat	222711	222770	120	+	.	.
scaffold888	subtractBed	intrn	231187	231225	.	+	.	Parent=CGI_10013454;
	scaffold888	TRF	Tandem_Repeat	231187	231225	78	+	.	.
scaffold888	subtractBed	intrn	268340	269018	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	268340	269050	309	+	.	.
scaffold888	subtractBed	intrn	268512	269018	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	268512	269029	608	+	.	.
scaffold888	subtractBed	intrn	269274	269308	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	269274	269308	54	+	.	.
scaffold888	subtractBed	intrn	272184	272210	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	272184	272210	54	+	.	.
scaffold888	subtractBed	intrn	272276	272300	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	272276	272300	50	+	.	.
scaffold888	subtractBed	intrn	272298	272332	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	272298	272332	70	+	.	.
scaffold888	subtractBed	intrn	272966	273187	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	272966	273187	266	+	.	.
scaffold888	subtractBed	intrn	273568	273811	.	+	.	Parent=CGI_10013455;
	scaffold888	TRF	Tandem_Repeat	273568	273811	312	+	.	.
scaffold888	subtractBed	intrn	336303	336334	.	-	.	Parent=CGI_10013460;
	scaffold888	TRF	Tandem_Repeat	336303	336334	55	+	.	.
scaffold890	subtractBed	intrn	35334	35488	.	-	.	Parent=CGI_10014458;
	scaffold890	TRF	Tandem_Repeat	35334	35488	82	+	.	.
scaffold890	subtractBed	intrn	47897	48144	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	47897	48144	284	+	.	.
scaffold890	subtractBed	intrn	47897	48152	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	47897	48152	251	+	.	.
scaffold890	subtractBed	intrn	48651	48925	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	48651	48925	222	+	.	.
scaffold890	subtractBed	intrn	48643	48923	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	48643	48923	357	+	.	.
scaffold890	subtractBed	intrn	48651	48859	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	48651	48859	346	+	.	.
scaffold890	subtractBed	intrn	64145	64176	.	+	.	Parent=CGI_10014460;
	scaffold890	TRF	Tandem_Repeat	64145	64176	64	+	.	.
scaffold890	subtractBed	intrn	64145	64176	.	-	.	Parent=CGI_10014462;
	scaffold890	TRF	Tandem_Repeat	64145	64176	64	+	.	.
scaffold890	subtractBed	intrn	83401	83868	.	-	.	Parent=CGI_10014464;
	scaffold890	WUBlastX	DNA_TcMar-Tc1	83401	83868	70	-	.	.
scaffold890	subtractBed	intrn	83473	84264	.	-	.	Parent=CGI_10014464;
	scaffold890	WUBlastX	DNA_TcMar-Tc1	83473	84264	369	-	.	.
scaffold890	subtractBed	intrn	83473	84408	.	-	.	Parent=CGI_10014464;
	scaffold890	WUBlastX	DNA_TcMar-Tc1	83473	84408	115	-	.	.
scaffold890	subtractBed	intrn	85847	86120	.	-	.	Parent=CGI_10014464;
	scaffold890	TRF	Tandem_Repeat	85847	86120	79	+	.	.
scaffold890	subtractBed	intrn	85853	86128	.	-	.	Parent=CGI_10014464;
	scaffold890	TRF	Tandem_Repeat	85853	86128	188	+	.	.
scaffold890	subtractBed	intrn	85910	86175	.	-	.	Parent=CGI_10014464;
	scaffold890	TRF	Tandem_Repeat	85910	86175	134	+	.	.
scaffold890	subtractBed	intrn	85847	86120	.	+	.	Parent=CGI_10014465;
	scaffold890	TRF	Tandem_Repeat	85847	86120	79	+	.	.
scaffold890	subtractBed	intrn	85853	86128	.	+	.	Parent=CGI_10014465;
	scaffold890	TRF	Tandem_Repeat	85853	86128	188	+	.	.
scaffold890	subtractBed	intrn	85910	86175	.	+	.	Parent=CGI_10014465;
	scaffold890	TRF	Tandem_Repeat	85910	86175	134	+	.	.
scaffold890	subtractBed	intrn	145836	145892	.	-	.	Parent=CGI_10014469;
	scaffold890	TRF	Tandem_Repeat	145836	145892	114	+	.	.
scaffold890	subtractBed	intrn	206787	207078	.	-	.	Parent=CGI_10014471;
	scaffold890	TRF	Tandem_Repeat	206787	207078	166	+	.	.
scaffold890	subtractBed	intrn	206984	207078	.	-	.	Parent=CGI_10014471;
	scaffold890	TRF	Tandem_Repeat	206984	207078	61	+	.	.
scaffold890	subtractBed	intrn	206826	207130	.	-	.	Parent=CGI_10014471;
	scaffold890	TRF	Tandem_Repeat	206826	207130	121	+	.	.
scaffold890	subtractBed	intrn	280913	281265	.	-	.	Parent=CGI_10014479;
	scaffold890	TRF	Tandem_Repeat	280913	281265	408	+	.	.
scaffold890	subtractBed	intrn	291485	291599	.	-	.	Parent=CGI_10014480;
	scaffold890	TRF	Tandem_Repeat	291485	291599	74	+	.	.
scaffold890	subtractBed	intrn	290577	290780	.	-	.	Parent=CGI_10014480;
	scaffold890	WUBlastX	LINE_L2	290577	290780	52	-	.	.
scaffold890	subtractBed	intrn	290532	290780	.	-	.	Parent=CGI_10014480;
	scaffold890	WUBlastX	LINE_L2	290532	290780	39	-	.	.
scaffold890	subtractBed	intrn	290613	290780	.	-	.	Parent=CGI_10014480;
	scaffold890	WUBlastX	LINE_CR1	290613	290780	70	-	.	.
scaffold890	subtractBed	intrn	290670	290954	.	-	.	Parent=CGI_10014480;
	scaffold890	WUBlastX	LINE_CR1	290670	290954	39	-	.	.
scaffold890	subtractBed	intrn	316968	317712	.	+	.	Parent=CGI_10014481;
	scaffold890	TRF	Tandem_Repeat	316968	317712	1124	+	.	.
scaffold890	subtractBed	intrn	318664	318810	.	+	.	Parent=CGI_10014481;
	scaffold890	TRF	Tandem_Repeat	318664	318810	73	+	.	.
scaffold890	subtractBed	intrn	318726	318855	.	+	.	Parent=CGI_10014481;
	scaffold890	TRF	Tandem_Repeat	318726	318855	93	+	.	.
scaffold890	subtractBed	intrn	378245	378458	.	-	.	Parent=CGI_10014482;
	scaffold890	TRF	Tandem_Repeat	378245	378458	136	+	.	.
scaffold891	subtractBed	intrn	31677	31869	.	-	.	Parent=CGI_10009066;
	scaffold891	TRF	Tandem_Repeat	31677	31869	242	+	.	.
scaffold891	subtractBed	intrn	42869	42900	.	+	.	Parent=CGI_10009068;
	scaffold891	TRF	Tandem_Repeat	42869	42900	64	+	.	.
scaffold891	subtractBed	intrn	44501	44545	.	+	.	Parent=CGI_10009068;
	scaffold891	TRF	Tandem_Repeat	44501	44545	90	+	.	.
scaffold891	subtractBed	intrn	49212	49423	.	-	.	Parent=CGI_10009069;
	scaffold891	TRF	Tandem_Repeat	49212	49423	345	+	.	.
scaffold891	subtractBed	intrn	51298	51355	.	-	.	Parent=CGI_10009069;
	scaffold891	TRF	Tandem_Repeat	51298	51355	116	+	.	.
scaffold891	subtractBed	intrn	191071	191367	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191071	191367	28	+	.	.
scaffold891	subtractBed	intrn	191487	191606	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191487	191606	57	+	.	.
scaffold891	subtractBed	intrn	191942	193129	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191942	193129	312	+	.	.
scaffold891	subtractBed	intrn	191888	192022	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191888	192022	23	+	.	.
scaffold891	subtractBed	intrn	191134	191334	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191134	191334	79	+	.	.
scaffold891	subtractBed	intrn	191508	191648	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191508	191648	46	+	.	.
scaffold891	subtractBed	intrn	191083	191322	.	+	.	Parent=CGI_10009074;
	scaffold891	WUBlastX	DNA_En-Spm	191083	191322	57	+	.	.
scaffold891	subtractBed	intrn	196196	196400	.	+	.	Parent=CGI_10009074;
	scaffold891	TRF	Tandem_Repeat	196196	196400	261	+	.	.
scaffold891	subtractBed	intrn	197528	197568	.	+	.	Parent=CGI_10009074;
	scaffold891	TRF	Tandem_Repeat	197528	197568	82	+	.	.
scaffold893	subtractBed	intrn	42427	42482	.	-	.	Parent=CGI_10005784;
	scaffold893	TRF	Tandem_Repeat	42427	42482	58	+	.	.
scaffold893	subtractBed	intrn	48765	48792	.	-	.	Parent=CGI_10005784;
	scaffold893	TRF	Tandem_Repeat	48765	48792	56	+	.	.
scaffold893	subtractBed	intrn	87968	88020	.	+	.	Parent=CGI_10005786;
	scaffold893	TRF	Tandem_Repeat	87968	88020	99	+	.	.
scaffold893	subtractBed	intrn	89612	89642	.	+	.	Parent=CGI_10005786;
	scaffold893	TRF	Tandem_Repeat	89612	89642	55	+	.	.
scaffold893	subtractBed	intrn	132696	132726	.	+	.	Parent=CGI_10005788;
	scaffold893	TRF	Tandem_Repeat	132696	132726	53	+	.	.
scaffold894	subtractBed	intrn	16621	16666	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	16621	16666	92	+	.	.
scaffold894	subtractBed	intrn	22727	22876	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	22727	22876	158	+	.	.
scaffold894	subtractBed	intrn	26518	26578	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	26518	26578	58	+	.	.
scaffold894	subtractBed	intrn	31200	31255	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	31200	31255	76	+	.	.
scaffold894	subtractBed	intrn	31209	31256	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	31209	31256	69	+	.	.
scaffold894	subtractBed	intrn	31537	31622	.	+	.	Parent=CGI_10008537;
	scaffold894	TRF	Tandem_Repeat	31537	31622	145	+	.	.
scaffold894	subtractBed	intrn	43998	44079	.	+	.	Parent=CGI_10008538;
	scaffold894	TRF	Tandem_Repeat	43998	44079	123	+	.	.
scaffold894	subtractBed	intrn	44472	44533	.	+	.	Parent=CGI_10008538;
	scaffold894	TRF	Tandem_Repeat	44472	44533	124	+	.	.
scaffold894	subtractBed	intrn	55541	55586	.	+	.	Parent=CGI_10008538;
	scaffold894	TRF	Tandem_Repeat	55541	55586	92	+	.	.
scaffold894	subtractBed	intrn	59738	59784	.	-	.	Parent=CGI_10008539;
	scaffold894	TRF	Tandem_Repeat	59738	59784	94	+	.	.
scaffold894	subtractBed	intrn	61351	61404	.	-	.	Parent=CGI_10008539;
	scaffold894	TRF	Tandem_Repeat	61351	61404	108	+	.	.
scaffold894	subtractBed	intrn	71865	72085	.	+	.	Parent=CGI_10008541;
	scaffold894	TRF	Tandem_Repeat	71865	72085	158	+	.	.
scaffold894	subtractBed	intrn	72487	73237	.	+	.	Parent=CGI_10008541;
	scaffold894	TRF	Tandem_Repeat	72487	73237	1118	+	.	.
scaffold894	subtractBed	intrn	95592	95662	.	-	.	Parent=CGI_10008542;
	scaffold894	TRF	Tandem_Repeat	95592	95662	78	+	.	.
scaffold894	subtractBed	intrn	95592	95662	.	-	.	Parent=CGI_10008542;
	scaffold894	TRF	Tandem_Repeat	95592	95662	67	+	.	.
scaffold894	subtractBed	intrn	95593	95659	.	-	.	Parent=CGI_10008542;
	scaffold894	TRF	Tandem_Repeat	95593	95659	68	+	.	.
scaffold894	subtractBed	intrn	96369	96404	.	-	.	Parent=CGI_10008542;
	scaffold894	TRF	Tandem_Repeat	96369	96404	56	+	.	.
scaffold894	subtractBed	intrn	130093	130657	.	+	.	Parent=CGI_10008544;
	scaffold894	TRF	Tandem_Repeat	130093	130657	887	+	.	.
scaffold894	subtractBed	intrn	131075	131296	.	+	.	Parent=CGI_10008544;
	scaffold894	TRF	Tandem_Repeat	131075	131296	444	+	.	.
scaffold894	subtractBed	intrn	131573	132045	.	+	.	Parent=CGI_10008544;
	scaffold894	TRF	Tandem_Repeat	131573	132045	777	+	.	.
scaffold894	subtractBed	intrn	152465	153283	.	-	.	Parent=CGI_10008547;
	scaffold894	WUBlastX	DNA_hAT-Tip100	152465	153283	198	-	.	.
scaffold894	subtractBed	intrn	152465	153079	.	-	.	Parent=CGI_10008547;
	scaffold894	WUBlastX	DNA_hAT-Tip100	152465	153079	303	-	.	.
scaffold894	subtractBed	intrn	183566	184030	.	+	.	Parent=CGI_10008548;
	scaffold894	WUBlastX	LINE_L1-Tx1	183566	184030	35	+	.	.
scaffold894	subtractBed	intrn	181413	181877	.	+	.	Parent=CGI_10008548;
	scaffold894	WUBlastX	LINE_L1-Tx1	181413	181877	35	+	.	.
scaffold894	subtractBed	intrn	181431	181766	.	+	.	Parent=CGI_10008548;
	scaffold894	WUBlastX	LINE_L1-Tx1	181431	181766	96	+	.	.
scaffold894	subtractBed	intrn	183584	183919	.	+	.	Parent=CGI_10008548;
	scaffold894	WUBlastX	LINE_L1-Tx1	183584	183919	96	+	.	.
scaffold895	subtractBed	intrn	134329	134362	.	-	.	Parent=CGI_10011332;
	scaffold895	TRF	Tandem_Repeat	134329	134362	52	+	.	.
scaffold895	subtractBed	intrn	139197	140465	.	-	.	Parent=CGI_10011332;
	scaffold895	TRF	Tandem_Repeat	139197	140465	2130	+	.	.
scaffold895	subtractBed	intrn	161954	162058	.	-	.	Parent=CGI_10011334;
	scaffold895	TRF	Tandem_Repeat	161954	162058	192	+	.	.
scaffold895	subtractBed	intrn	163065	163098	.	-	.	Parent=CGI_10011334;
	scaffold895	TRF	Tandem_Repeat	163065	163098	54	+	.	.
scaffold895	subtractBed	intrn	175138	175138	.	+	.	Parent=CGI_10011335;
	scaffold895	WUBlastX	DNA_Harbinger	175138	175284	44	+	.	.
scaffold895	subtractBed	intrn	193057	193092	.	-	.	Parent=CGI_10011336;
	scaffold895	TRF	Tandem_Repeat	193057	193092	72	+	.	.
scaffold895	subtractBed	intrn	197719	198208	.	-	.	Parent=CGI_10011336;
	scaffold895	TRF	Tandem_Repeat	197719	198208	558	+	.	.
scaffold895	subtractBed	intrn	202266	202375	.	-	.	Parent=CGI_10011336;
	scaffold895	TRF	Tandem_Repeat	202266	202375	193	+	.	.
scaffold895	subtractBed	intrn	221310	221570	.	+	.	Parent=CGI_10011337;
	scaffold895	TRF	Tandem_Repeat	221310	221570	323	+	.	.
scaffold895	subtractBed	intrn	221314	221540	.	+	.	Parent=CGI_10011337;
	scaffold895	TRF	Tandem_Repeat	221314	221540	375	+	.	.
scaffold895	subtractBed	intrn	222855	223080	.	+	.	Parent=CGI_10011337;
	scaffold895	TRF	Tandem_Repeat	222855	223080	353	+	.	.
scaffold896	subtractBed	intrn	45834	45891	.	-	.	Parent=CGI_10022830;
	scaffold896	TRF	Tandem_Repeat	45834	45891	116	+	.	.
scaffold896	subtractBed	intrn	45889	45947	.	-	.	Parent=CGI_10022830;
	scaffold896	TRF	Tandem_Repeat	45889	45947	91	+	.	.
scaffold896	subtractBed	intrn	47541	47795	.	-	.	Parent=CGI_10022830;
	scaffold896	WUBlastX	LINE_L1-Tx1	47541	47795	40	+	.	.
scaffold896	subtractBed	intrn	47842	48237	.	-	.	Parent=CGI_10022830;
	scaffold896	WUBlastX	LINE_L1-Tx1	47842	48237	85	+	.	.
scaffold896	subtractBed	intrn	47812	48321	.	-	.	Parent=CGI_10022830;
	scaffold896	WUBlastX	LINE_L1-Tx1	47812	48321	71	+	.	.
scaffold896	subtractBed	intrn	77604	77664	.	-	.	Parent=CGI_10022831;
	scaffold896	TRF	Tandem_Repeat	77604	77664	122	+	.	.
scaffold896	subtractBed	intrn	91483	91529	.	-	.	Parent=CGI_10022832;
	scaffold896	TRF	Tandem_Repeat	91483	91529	94	+	.	.
scaffold896	subtractBed	intrn	92025	92176	.	-	.	Parent=CGI_10022832;
	scaffold896	TRF	Tandem_Repeat	92025	92176	205	+	.	.
scaffold896	subtractBed	intrn	107971	108327	.	-	.	Parent=CGI_10022832;
	scaffold896	TRF	Tandem_Repeat	107971	108327	417	+	.	.
scaffold896	subtractBed	intrn	107971	108327	.	-	.	Parent=CGI_10022832;
	scaffold896	TRF	Tandem_Repeat	107971	108327	404	+	.	.
scaffold896	subtractBed	intrn	115945	116220	.	-	.	Parent=CGI_10022832;
	scaffold896	WUBlastX	LINE_R2-Hero	115945	116220	42	+	.	.
scaffold896	subtractBed	intrn	115155	115667	.	-	.	Parent=CGI_10022832;
	scaffold896	WUBlastX	LINE_R2-Hero	115155	115667	200	+	.	.
scaffold896	subtractBed	intrn	115673	115981	.	-	.	Parent=CGI_10022832;
	scaffold896	WUBlastX	LINE_R2-Hero	115673	115981	192	+	.	.
scaffold896	subtractBed	intrn	115983	116141	.	-	.	Parent=CGI_10022832;
	scaffold896	WUBlastX	LINE_R2-Hero	115983	116141	48	+	.	.
scaffold896	subtractBed	intrn	115117	115296	.	-	.	Parent=CGI_10022832;
	scaffold896	WUBlastX	LINE_R2-Hero	115117	115296	55	+	.	.
scaffold896	subtractBed	intrn	123486	123629	.	+	.	Parent=CGI_10022834;
	scaffold896	WUBlastX	LINE_RTE-X	123486	123629	46	+	.	.
scaffold896	subtractBed	intrn	123519	123644	.	+	.	Parent=CGI_10022834;
	scaffold896	WUBlastX	LINE_RTE-X	123519	123644	50	+	.	.
scaffold896	subtractBed	intrn	123719	123949	.	+	.	Parent=CGI_10022834;
	scaffold896	WUBlastX	LINE_Proto2	123719	123949	43	+	.	.
scaffold896	subtractBed	intrn	123653	123814	.	+	.	Parent=CGI_10022834;
	scaffold896	WUBlastX	LINE_Jockey	123653	123814	44	+	.	.
scaffold896	subtractBed	intrn	181995	182091	.	+	.	Parent=CGI_10022837;
	scaffold896	TRF	Tandem_Repeat	181995	182091	117	+	.	.
scaffold896	subtractBed	intrn	187652	187699	.	-	.	Parent=CGI_10022838;
	scaffold896	TRF	Tandem_Repeat	187652	187699	96	+	.	.
scaffold896	subtractBed	intrn	200189	200318	.	-	.	Parent=CGI_10022838;
	scaffold896	TRF	Tandem_Repeat	200189	200318	201	+	.	.
scaffold896	subtractBed	intrn	247680	247898	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247680	247898	42	+	.	.
scaffold896	subtractBed	intrn	247797	247934	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1	247797	247934	36	+	.	.
scaffold896	subtractBed	intrn	247183	247329	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1	247183	247329	42	+	.	.
scaffold896	subtractBed	intrn	247734	247997	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247734	247997	29	+	.	.
scaffold896	subtractBed	intrn	247207	247377	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247207	247377	89	+	.	.
scaffold896	subtractBed	intrn	247609	247836	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247609	247836	75	+	.	.
scaffold896	subtractBed	intrn	248048	248671	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	248048	248671	166	+	.	.
scaffold896	subtractBed	intrn	247207	247746	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247207	247746	80	+	.	.
scaffold896	subtractBed	intrn	247982	248740	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1	247982	248740	41	+	.	.
scaffold896	subtractBed	intrn	247728	247862	.	-	.	Parent=CGI_10022839;
	scaffold896	WUBlastX	LINE_L1-Tx1	247728	247862	51	+	.	.
scaffold896	subtractBed	intrn	301975	302167	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	301975	302167	188	+	.	.
scaffold896	subtractBed	intrn	301980	302150	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	301980	302150	115	+	.	.
scaffold896	subtractBed	intrn	313060	314343	.	-	.	Parent=CGI_10022840;
	scaffold896	WUBlastX	LINE_L1-Tx1	313060	314343	121	-	.	.
scaffold896	subtractBed	intrn	314319	316364	.	-	.	Parent=CGI_10022840;
	scaffold896	WUBlastX	LINE_L1-Tx1	314319	316364	909	-	.	.
scaffold896	subtractBed	intrn	318967	319144	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	318967	319144	82	+	.	.
scaffold896	subtractBed	intrn	320173	320225	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	320173	320225	97	+	.	.
scaffold896	subtractBed	intrn	320313	320358	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	320313	320358	92	+	.	.
scaffold896	subtractBed	intrn	320554	320620	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	320554	320620	134	+	.	.
scaffold896	subtractBed	intrn	320785	320824	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	320785	320824	80	+	.	.
scaffold896	subtractBed	intrn	321483	321701	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	321483	321701	112	+	.	.
scaffold896	subtractBed	intrn	321483	321697	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	321483	321697	165	+	.	.
scaffold896	subtractBed	intrn	321573	321701	.	-	.	Parent=CGI_10022840;
	scaffold896	TRF	Tandem_Repeat	321573	321701	77	+	.	.
scaffold896	subtractBed	intrn	381058	381389	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	381058	381389	236	+	.	.
scaffold896	subtractBed	intrn	381136	381349	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	381136	381349	110	+	.	.
scaffold896	subtractBed	intrn	381289	381361	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	381289	381361	65	+	.	.
scaffold896	subtractBed	intrn	388224	388434	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	388224	388434	104	+	.	.
scaffold896	subtractBed	intrn	388159	388434	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	388159	388434	239	+	.	.
scaffold896	subtractBed	intrn	388337	388434	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	388337	388434	91	+	.	.
scaffold896	subtractBed	intrn	393279	393439	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	393279	393439	169	+	.	.
scaffold896	subtractBed	intrn	393468	393527	.	-	.	Parent=CGI_10022847;
	scaffold896	TRF	Tandem_Repeat	393468	393527	72	+	.	.
scaffold896	subtractBed	intrn	422937	422990	.	+	.	Parent=CGI_10022848;
	scaffold896	TRF	Tandem_Repeat	422937	422990	74	+	.	.
scaffold896	subtractBed	intrn	423163	424239	.	+	.	Parent=CGI_10022848;
	scaffold896	TRF	Tandem_Repeat	423163	424239	1777	+	.	.
scaffold896	subtractBed	intrn	432433	432477	.	+	.	Parent=CGI_10022849;
	scaffold896	TRF	Tandem_Repeat	432433	432477	90	+	.	.
scaffold896	subtractBed	intrn	434072	434119	.	+	.	Parent=CGI_10022849;
	scaffold896	TRF	Tandem_Repeat	434072	434119	96	+	.	.
scaffold896	subtractBed	intrn	438049	438420	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	438049	438420	134	-	.	.
scaffold896	subtractBed	intrn	437261	437575	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	437261	437575	80	-	.	.
scaffold896	subtractBed	intrn	437751	438032	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	437751	438032	51	-	.	.
scaffold896	subtractBed	intrn	438052	438321	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	438052	438321	137	-	.	.
scaffold896	subtractBed	intrn	437616	438044	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	437616	438044	37	-	.	.
scaffold896	subtractBed	intrn	438187	438477	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-BovB	438187	438477	31	-	.	.
scaffold896	subtractBed	intrn	437141	437596	.	+	.	Parent=CGI_10022849;
	scaffold896	WUBlastX	LINE_RTE-X	437141	437596	46	-	.	.
scaffold896	subtractBed	intrn	438049	438420	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	438049	438420	134	-	.	.
scaffold896	subtractBed	intrn	437261	437575	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	437261	437575	80	-	.	.
scaffold896	subtractBed	intrn	437751	438032	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	437751	438032	51	-	.	.
scaffold896	subtractBed	intrn	438052	438321	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	438052	438321	137	-	.	.
scaffold896	subtractBed	intrn	437616	438044	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	437616	438044	37	-	.	.
scaffold896	subtractBed	intrn	438187	438477	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-BovB	438187	438477	31	-	.	.
scaffold896	subtractBed	intrn	437141	437596	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_RTE-X	437141	437596	46	-	.	.
scaffold896	subtractBed	intrn	447535	448401	.	-	.	Parent=CGI_10022850;
	scaffold896	WUBlastX	LINE_L1-Tx1	447535	448401	100	-	.	.
scaffold896	subtractBed	intrn	469514	469561	.	+	.	Parent=CGI_10022851;
	scaffold896	TRF	Tandem_Repeat	469514	469561	96	+	.	.
scaffold896	subtractBed	intrn	471254	471296	.	+	.	Parent=CGI_10022851;
	scaffold896	TRF	Tandem_Repeat	471254	471296	86	+	.	.
scaffold896	subtractBed	intrn	472078	472151	.	+	.	Parent=CGI_10022851;
	scaffold896	TRF	Tandem_Repeat	472078	472151	62	+	.	.
scaffold896	subtractBed	intrn	469514	469561	.	-	.	Parent=CGI_10022852;
	scaffold896	TRF	Tandem_Repeat	469514	469561	96	+	.	.
scaffold896	subtractBed	intrn	471254	471296	.	-	.	Parent=CGI_10022852;
	scaffold896	TRF	Tandem_Repeat	471254	471296	86	+	.	.
scaffold896	subtractBed	intrn	507470	508602	.	-	.	Parent=CGI_10022855;
	scaffold896	TRF	Tandem_Repeat	507470	508602	745	+	.	.
scaffold896	subtractBed	intrn	546325	546378	.	+	.	Parent=CGI_10022859;
	scaffold896	TRF	Tandem_Repeat	546325	546378	108	+	.	.
scaffold896	subtractBed	intrn	595240	595286	.	+	.	Parent=CGI_10022861;
	scaffold896	TRF	Tandem_Repeat	595240	595286	94	+	.	.
scaffold896	subtractBed	intrn	651214	651263	.	+	.	Parent=CGI_10022869;
	scaffold896	TRF	Tandem_Repeat	651214	651263	100	+	.	.
scaffold896	subtractBed	intrn	661564	661612	.	-	.	Parent=CGI_10022870;
	scaffold896	TRF	Tandem_Repeat	661564	661612	98	+	.	.
scaffold896	subtractBed	intrn	766663	766716	.	+	.	Parent=CGI_10022873;
	scaffold896	TRF	Tandem_Repeat	766663	766716	90	+	.	.
scaffold896	subtractBed	intrn	768492	768541	.	+	.	Parent=CGI_10022873;
	scaffold896	TRF	Tandem_Repeat	768492	768541	84	+	.	.
scaffold896	subtractBed	intrn	771000	771042	.	+	.	Parent=CGI_10022873;
	scaffold896	TRF	Tandem_Repeat	771000	771042	86	+	.	.
scaffold9	subtractBed	intrn	113289	113658	.	-	.	Parent=CGI_10006689;
	scaffold9	TRF	Tandem_Repeat	113263	113658	260	+	.	.
scaffold90	subtractBed	intrn	137427	137882	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	DNA_Maverick	137427	137882	39	+	.	.
scaffold90	subtractBed	intrn	136159	136779	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	DNA_Maverick	136159	136779	112	+	.	.
scaffold90	subtractBed	intrn	137077	137178	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	DNA_Maverick	137077	137178	30	+	.	.
scaffold90	subtractBed	intrn	137178	137648	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	DNA_Maverick	137178	137648	136	+	.	.
scaffold90	subtractBed	intrn	137721	137876	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	DNA_Maverick	137721	137876	117	+	.	.
scaffold90	subtractBed	intrn	137890	139008	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	137890	139008	128	+	.	.
scaffold90	subtractBed	intrn	137890	138801	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	137890	138801	802	+	.	.
scaffold90	subtractBed	intrn	136636	136956	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	136636	136956	23	+	.	.
scaffold90	subtractBed	intrn	136819	136902	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	136819	136902	23	+	.	.
scaffold90	subtractBed	intrn	140042	140209	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	139988	140209	48	+	.	.
scaffold90	subtractBed	intrn	140069	140539	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	140069	140539	107	+	.	.
scaffold90	subtractBed	intrn	140339	140539	.	+	.	Parent=CGI_10015161;
	scaffold90	WUBlastX	LTR_Gypsy	140339	140539	107	+	.	.
scaffold90	subtractBed	intrn	256862	256862	.	+	.	Parent=CGI_10015169;
	scaffold90	WUBlastX	DNA_Harbinger	256713	256862	74	+	.	.
scaffold90	subtractBed	intrn	275973	276009	.	+	.	Parent=CGI_10015170;
	scaffold90	TRF	Tandem_Repeat	275973	276009	74	+	.	.
scaffold90	subtractBed	intrn	269903	270115	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	269903	270115	35	-	.	.
scaffold90	subtractBed	intrn	270241	270378	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	270241	270378	102	-	.	.
scaffold90	subtractBed	intrn	270805	270996	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	270805	270996	129	-	.	.
scaffold90	subtractBed	intrn	270999	271142	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	270999	271142	23	-	.	.
scaffold90	subtractBed	intrn	270241	270405	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	270241	270405	39	-	.	.
scaffold90	subtractBed	intrn	270808	271050	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	DNA_Harbinger	270808	271050	76	-	.	.
scaffold90	subtractBed	intrn	278672	278968	.	+	.	Parent=CGI_10015170;
	scaffold90	WUBlastX	LINE_RTE-X	278672	278968	31	-	.	.
scaffold90	subtractBed	intrn	323433	323471	.	+	.	Parent=CGI_10015172;
	scaffold90	TRF	Tandem_Repeat	323433	323471	78	+	.	.
scaffold90	subtractBed	intrn	328785	328811	.	+	.	Parent=CGI_10015172;
	scaffold90	TRF	Tandem_Repeat	328785	328811	54	+	.	.
scaffold90	subtractBed	intrn	329451	329486	.	+	.	Parent=CGI_10015172;
	scaffold90	TRF	Tandem_Repeat	329451	329486	72	+	.	.
scaffold90	subtractBed	intrn	339214	339474	.	+	.	Parent=CGI_10015172;
	scaffold90	WUBlastX	DNA_hAT-Ac	339214	339474	78	-	.	.
scaffold90	subtractBed	intrn	339277	339654	.	+	.	Parent=CGI_10015172;
	scaffold90	WUBlastX	DNA_hAT-Ac	339277	339654	219	-	.	.
scaffold90	subtractBed	intrn	340086	340202	.	+	.	Parent=CGI_10015172;
	scaffold90	WUBlastX	DNA_hAT-Ac	340086	340202	39	-	.	.
scaffold90	subtractBed	intrn	340124	341569	.	+	.	Parent=CGI_10015172;
	scaffold90	WUBlastX	DNA_hAT-Ac	340124	341569	715	-	.	.
scaffold90	subtractBed	intrn	353642	353712	.	+	.	Parent=CGI_10015173;
	scaffold90	TRF	Tandem_Repeat	353642	353712	142	+	.	.
scaffold90	subtractBed	intrn	384849	385052	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_TcMar-Marin	384849	385052	87	+	.	.
scaffold90	subtractBed	intrn	384849	385406	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_TcMar-Marin	384849	385406	83	+	.	.
scaffold90	subtractBed	intrn	387951	388281	.	-	.	Parent=CGI_10015174;
	scaffold90	TRF	Tandem_Repeat	387951	388281	398	+	.	.
scaffold90	subtractBed	intrn	391847	392524	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-hATw	391847	392524	144	+	.	.
scaffold90	subtractBed	intrn	389604	389783	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_Crypton	389604	389783	96	+	.	.
scaffold90	subtractBed	intrn	389942	390325	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_Crypton	389942	390325	190	+	.	.
scaffold90	subtractBed	intrn	389172	389720	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_Crypton	389172	389720	225	+	.	.
scaffold90	subtractBed	intrn	391919	392689	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-hATw	391919	392689	65	+	.	.
scaffold90	subtractBed	intrn	394570	394668	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	LTR_Copia	394570	394668	29	-	.	.
scaffold90	subtractBed	intrn	395099	396442	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	LTR_Gypsy	395099	396442	180	-	.	.
scaffold90	subtractBed	intrn	395444	396163	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	LTR_Gypsy	395444	396163	235	-	.	.
scaffold90	subtractBed	intrn	396842	396918	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	396842	397009	46	-	.	.
scaffold90	subtractBed	intrn	394856	396052	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	LTR_Gypsy	394856	396052	834	-	.	.
scaffold90	subtractBed	intrn	397005	397009	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	396842	397009	46	-	.	.
scaffold90	subtractBed	intrn	399186	399938	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	399186	399938	110	-	.	.
scaffold90	subtractBed	intrn	397964	398032	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100?	397964	398032	45	-	.	.
scaffold90	subtractBed	intrn	399174	399788	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100?	399174	399788	224	-	.	.
scaffold90	subtractBed	intrn	398040	398618	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	398040	398618	42	-	.	.
scaffold90	subtractBed	intrn	398724	398954	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	398724	398954	128	-	.	.
scaffold90	subtractBed	intrn	399186	399707	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	399186	399707	258	-	.	.
scaffold90	subtractBed	intrn	399715	400035	.	-	.	Parent=CGI_10015174;
	scaffold90	WUBlastX	DNA_hAT-Tip100	399715	400035	56	-	.	.
scaffold905	subtractBed	intrn	4527	4946	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1-Tx1	4527	4946	83	+	.	.
scaffold905	subtractBed	intrn	4952	5692	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1-Tx1	4952	5692	304	+	.	.
scaffold905	subtractBed	intrn	5805	5924	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1-Tx1	5805	5924	38	+	.	.
scaffold905	subtractBed	intrn	4952	5833	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1	4952	5833	87	+	.	.
scaffold905	subtractBed	intrn	5787	6419	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1	5787	6419	30	+	.	.
scaffold905	subtractBed	intrn	4707	4940	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1	4707	4940	116	+	.	.
scaffold905	subtractBed	intrn	3570	3725	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_L1-Tx1	3570	3725	31	+	.	.
scaffold905	subtractBed	intrn	3747	3902	.	+	.	Parent=CGI_10004338;
	scaffold905	WUBlastX	LINE_R2	3747	3902	22	+	.	.
scaffold908	subtractBed	intrn	40262	40377	.	-	.	Parent=CGI_10013126;
	scaffold908	TRF	Tandem_Repeat	40262	40377	160	+	.	.
scaffold908	subtractBed	intrn	40262	40416	.	-	.	Parent=CGI_10013126;
	scaffold908	TRF	Tandem_Repeat	40262	40416	87	+	.	.
scaffold908	subtractBed	intrn	52163	52232	.	-	.	Parent=CGI_10013127;
	scaffold908	TRF	Tandem_Repeat	52163	52232	124	+	.	.
scaffold908	subtractBed	intrn	53086	53113	.	-	.	Parent=CGI_10013127;
	scaffold908	TRF	Tandem_Repeat	53086	53113	56	+	.	.
scaffold908	subtractBed	intrn	62327	62385	.	-	.	Parent=CGI_10013128;
	scaffold908	TRF	Tandem_Repeat	62327	62385	118	+	.	.
scaffold908	subtractBed	intrn	65808	65877	.	-	.	Parent=CGI_10013128;
	scaffold908	TRF	Tandem_Repeat	65808	65877	61	+	.	.
scaffold908	subtractBed	intrn	66843	66895	.	-	.	Parent=CGI_10013128;
	scaffold908	TRF	Tandem_Repeat	66843	66895	106	+	.	.
scaffold908	subtractBed	intrn	67204	67238	.	-	.	Parent=CGI_10013128;
	scaffold908	TRF	Tandem_Repeat	67204	67238	70	+	.	.
scaffold908	subtractBed	intrn	89402	90242	.	-	.	Parent=CGI_10013129;
	scaffold908	TRF	Tandem_Repeat	89402	90242	944	+	.	.
scaffold908	subtractBed	intrn	89402	90242	.	-	.	Parent=CGI_10013129;
	scaffold908	TRF	Tandem_Repeat	89402	90242	880	+	.	.
scaffold908	subtractBed	intrn	100660	100716	.	+	.	Parent=CGI_10013130;
	scaffold908	TRF	Tandem_Repeat	100660	100716	114	+	.	.
scaffold908	subtractBed	intrn	116871	117140	.	+	.	Parent=CGI_10013132;
	scaffold908	TRF	Tandem_Repeat	116871	117140	434	+	.	.
scaffold908	subtractBed	intrn	119105	119880	.	+	.	Parent=CGI_10013132;
	scaffold908	TRF	Tandem_Repeat	119105	119880	1282	+	.	.
scaffold908	subtractBed	intrn	132191	132494	.	+	.	Parent=CGI_10013133;
	scaffold908	TRF	Tandem_Repeat	132191	132494	310	+	.	.
scaffold908	subtractBed	intrn	132809	133267	.	+	.	Parent=CGI_10013133;
	scaffold908	TRF	Tandem_Repeat	132809	133267	376	+	.	.
scaffold908	subtractBed	intrn	142542	142603	.	+	.	Parent=CGI_10013133;
	scaffold908	TRF	Tandem_Repeat	142542	142603	90	+	.	.
scaffold908	subtractBed	intrn	186136	186173	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	186136	186173	76	+	.	.
scaffold908	subtractBed	intrn	194381	194587	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	194381	194587	215	+	.	.
scaffold908	subtractBed	intrn	194422	194588	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	194422	194588	88	+	.	.
scaffold908	subtractBed	intrn	194475	194587	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	194475	194587	61	+	.	.
scaffold908	subtractBed	intrn	194422	194610	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	194422	194610	207	+	.	.
scaffold908	subtractBed	intrn	194722	194925	.	+	.	Parent=CGI_10013134;
	scaffold908	TRF	Tandem_Repeat	194722	194925	60	+	.	.
scaffold908	subtractBed	intrn	208033	208090	.	+	.	Parent=CGI_10013135;
	scaffold908	TRF	Tandem_Repeat	208033	208090	98	+	.	.
scaffold908	subtractBed	intrn	233772	234182	.	-	.	Parent=CGI_10013139;
	scaffold908	TRF	Tandem_Repeat	233772	234182	603	+	.	.
scaffold908	subtractBed	intrn	234399	234658	.	-	.	Parent=CGI_10013139;
	scaffold908	TRF	Tandem_Repeat	234399	234658	358	+	.	.
scaffold908	subtractBed	intrn	234399	234646	.	-	.	Parent=CGI_10013139;
	scaffold908	TRF	Tandem_Repeat	234399	234646	424	+	.	.
scaffold908	subtractBed	intrn	268756	268797	.	+	.	Parent=CGI_10013140;
	scaffold908	TRF	Tandem_Repeat	268756	268797	59	+	.	.
scaffold91	subtractBed	intrn	9966	10002	.	-	.	Parent=CGI_10004046;
	scaffold91	TRF	Tandem_Repeat	9966	10002	74	+	.	.
scaffold91	subtractBed	intrn	14162	14432	.	-	.	Parent=CGI_10004046;
	scaffold91	TRF	Tandem_Repeat	14162	14432	335	+	.	.
scaffold91	subtractBed	intrn	14193	14433	.	-	.	Parent=CGI_10004046;
	scaffold91	TRF	Tandem_Repeat	14193	14433	412	+	.	.
scaffold910	subtractBed	intrn	63197	63231	.	-	.	Parent=CGI_10004228;
	scaffold910	TRF	Tandem_Repeat	63197	63231	70	+	.	.
scaffold910	subtractBed	intrn	63390	63424	.	-	.	Parent=CGI_10004228;
	scaffold910	TRF	Tandem_Repeat	63390	63424	70	+	.	.
scaffold910	subtractBed	intrn	67896	67966	.	-	.	Parent=CGI_10004228;
	scaffold910	TRF	Tandem_Repeat	67896	67966	142	+	.	.
scaffold910	subtractBed	intrn	69136	69229	.	-	.	Parent=CGI_10004228;
	scaffold910	TRF	Tandem_Repeat	69136	69229	152	+	.	.
scaffold910	subtractBed	intrn	70696	70843	.	-	.	Parent=CGI_10004228;
	scaffold910	TRF	Tandem_Repeat	70696	70843	152	+	.	.
scaffold911	subtractBed	intrn	95931	96014	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95931	96014	49	+	.	.
scaffold911	subtractBed	intrn	95611	95775	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95611	95775	72	+	.	.
scaffold911	subtractBed	intrn	96982	97110	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	96982	97110	101	+	.	.
scaffold911	subtractBed	intrn	95333	95608	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95333	95608	47	+	.	.
scaffold911	subtractBed	intrn	95487	95957	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95487	95957	44	+	.	.
scaffold911	subtractBed	intrn	96988	97161	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	96988	97161	86	+	.	.
scaffold911	subtractBed	intrn	94523	94864	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	94523	94864	116	+	.	.
scaffold911	subtractBed	intrn	95018	95302	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95018	95302	42	+	.	.
scaffold911	subtractBed	intrn	95647	95775	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95647	95775	98	+	.	.
scaffold911	subtractBed	intrn	96907	97101	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	96907	97101	57	+	.	.
scaffold911	subtractBed	intrn	96985	97215	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	96985	97215	58	+	.	.
scaffold911	subtractBed	intrn	95333	95464	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95333	95464	61	+	.	.
scaffold911	subtractBed	intrn	94369	94521	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	94369	94521	82	+	.	.
scaffold911	subtractBed	intrn	95656	95802	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	95656	95802	78	+	.	.
scaffold911	subtractBed	intrn	94523	94945	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	94523	94945	81	+	.	.
scaffold911	subtractBed	intrn	98128	98241	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	98128	98241	28	+	.	.
scaffold911	subtractBed	intrn	98238	99245	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	LTR_Gypsy	98238	99245	280	+	.	.
scaffold911	subtractBed	intrn	102989	104193	.	-	.	Parent=CGI_10012137;
	scaffold911	TRF	Tandem_Repeat	102989	104193	1560	+	.	.
scaffold911	subtractBed	intrn	104352	104389	.	-	.	Parent=CGI_10012137;
	scaffold911	TRF	Tandem_Repeat	104352	104389	51	+	.	.
scaffold911	subtractBed	intrn	107817	108155	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	DNA_hAT-Tip100	107817	108155	121	+	.	.
scaffold911	subtractBed	intrn	108499	108651	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	DNA_hAT-Tip100	108499	108651	26	+	.	.
scaffold911	subtractBed	intrn	108812	109015	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	DNA_hAT-Tip100	108812	109015	27	+	.	.
scaffold911	subtractBed	intrn	108840	108911	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	DNA_hAT-Tip100	108840	108911	31	+	.	.
scaffold911	subtractBed	intrn	107736	108155	.	-	.	Parent=CGI_10012137;
	scaffold911	WUBlastX	DNA_hAT-Tip100	107736	108155	116	+	.	.
scaffold911	subtractBed	intrn	161758	162033	.	+	.	Parent=CGI_10012141;
	scaffold911	WUBlastX	LINE_L1	161758	162033	20	-	.	.
scaffold911	subtractBed	intrn	162390	162596	.	+	.	Parent=CGI_10012141;
	scaffold911	WUBlastX	LINE_L1-Tx1	162390	162596	27	-	.	.
scaffold911	subtractBed	intrn	162770	163987	.	+	.	Parent=CGI_10012141;
	scaffold911	WUBlastX	LINE_L1	162770	163987	274	-	.	.
scaffold911	subtractBed	intrn	168984	169013	.	+	.	Parent=CGI_10012141;
	scaffold911	TRF	Tandem_Repeat	168984	169013	60	+	.	.
scaffold911	subtractBed	intrn	168866	169216	.	+	.	Parent=CGI_10012141;
	scaffold911	WUBlastX	DNA_En-Spm	168866	169216	64	+	.	.
scaffold911	subtractBed	intrn	168791	169216	.	+	.	Parent=CGI_10012141;
	scaffold911	WUBlastX	DNA_En-Spm	168791	169216	44	+	.	.
scaffold911	subtractBed	intrn	266965	267023	.	-	.	Parent=CGI_10012144;
	scaffold911	TRF	Tandem_Repeat	266965	267023	59	+	.	.
scaffold911	subtractBed	intrn	275258	275310	.	+	.	Parent=CGI_10012145;
	scaffold911	TRF	Tandem_Repeat	275258	275310	106	+	.	.
scaffold912	subtractBed	intrn	35749	35788	.	-	.	Parent=CGI_10002926;
	scaffold912	TRF	Tandem_Repeat	35749	35788	80	+	.	.
scaffold912	subtractBed	intrn	36218	36430	.	-	.	Parent=CGI_10002926;
	scaffold912	WUBlastX	LINE_L1-Tx1	36218	36430	92	-	.	.
scaffold912	subtractBed	intrn	36263	36445	.	-	.	Parent=CGI_10002926;
	scaffold912	WUBlastX	LINE_L1-Tx1	36263	36445	93	-	.	.
scaffold912	subtractBed	intrn	36314	36430	.	-	.	Parent=CGI_10002926;
	scaffold912	WUBlastX	LINE_L1	36314	36430	101	-	.	.
scaffold912	subtractBed	intrn	44521	44547	.	-	.	Parent=CGI_10002926;
	scaffold912	TRF	Tandem_Repeat	44521	44547	54	+	.	.
scaffold914	subtractBed	intrn	49373	49478	.	-	.	Parent=CGI_10018867;
	scaffold914	TRF	Tandem_Repeat	49373	49478	97	+	.	.
scaffold914	subtractBed	intrn	49380	49477	.	-	.	Parent=CGI_10018867;
	scaffold914	TRF	Tandem_Repeat	49380	49477	141	+	.	.
scaffold914	subtractBed	intrn	102058	102090	.	+	.	Parent=CGI_10018871;
	scaffold914	TRF	Tandem_Repeat	102058	102090	66	+	.	.
scaffold914	subtractBed	intrn	124557	124586	.	+	.	Parent=CGI_10018872;
	scaffold914	TRF	Tandem_Repeat	124557	124586	60	+	.	.
scaffold914	subtractBed	intrn	138749	138790	.	+	.	Parent=CGI_10018872;
	scaffold914	TRF	Tandem_Repeat	138749	138790	84	+	.	.
scaffold914	subtractBed	intrn	138749	138790	.	-	.	Parent=CGI_10018873;
	scaffold914	TRF	Tandem_Repeat	138749	138790	84	+	.	.
scaffold914	subtractBed	intrn	152896	152940	.	-	.	Parent=CGI_10018874;
	scaffold914	TRF	Tandem_Repeat	152896	152940	63	+	.	.
scaffold914	subtractBed	intrn	161570	161626	.	+	.	Parent=CGI_10018875;
	scaffold914	TRF	Tandem_Repeat	161570	161626	107	+	.	.
scaffold914	subtractBed	intrn	169877	169920	.	+	.	Parent=CGI_10018877;
	scaffold914	TRF	Tandem_Repeat	169877	169920	88	+	.	.
scaffold914	subtractBed	intrn	174064	174112	.	+	.	Parent=CGI_10018878;
	scaffold914	TRF	Tandem_Repeat	174064	174112	71	+	.	.
scaffold914	subtractBed	intrn	178399	178595	.	+	.	Parent=CGI_10018878;
	scaffold914	TRF	Tandem_Repeat	178399	178595	166	+	.	.
scaffold914	subtractBed	intrn	178491	179047	.	+	.	Parent=CGI_10018878;
	scaffold914	TRF	Tandem_Repeat	178491	179047	652	+	.	.
scaffold914	subtractBed	intrn	178572	179047	.	+	.	Parent=CGI_10018878;
	scaffold914	TRF	Tandem_Repeat	178572	179047	677	+	.	.
scaffold914	subtractBed	intrn	178491	179047	.	+	.	Parent=CGI_10018878;
	scaffold914	TRF	Tandem_Repeat	178491	179047	672	+	.	.
scaffold914	subtractBed	intrn	182485	182856	.	+	.	Parent=CGI_10018879;
	scaffold914	TRF	Tandem_Repeat	182485	182856	464	+	.	.
scaffold914	subtractBed	intrn	193219	193274	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	193219	193274	112	+	.	.
scaffold914	subtractBed	intrn	193272	193302	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	193272	193302	53	+	.	.
scaffold914	subtractBed	intrn	194552	194691	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	194552	194691	81	+	.	.
scaffold914	subtractBed	intrn	194718	194911	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	194718	194911	138	+	.	.
scaffold914	subtractBed	intrn	202776	202817	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	202776	202817	84	+	.	.
scaffold914	subtractBed	intrn	203964	204008	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	203964	204008	90	+	.	.
scaffold914	subtractBed	intrn	209130	209161	.	+	.	Parent=CGI_10018880;
	scaffold914	TRF	Tandem_Repeat	209130	209161	64	+	.	.
scaffold914	subtractBed	intrn	217976	218056	.	-	.	Parent=CGI_10018881;
	scaffold914	TRF	Tandem_Repeat	217976	218056	75	+	.	.
scaffold914	subtractBed	intrn	217982	218052	.	-	.	Parent=CGI_10018881;
	scaffold914	TRF	Tandem_Repeat	217982	218052	79	+	.	.
scaffold914	subtractBed	intrn	256049	256747	.	+	.	Parent=CGI_10018883;
	scaffold914	WUBlastX	DNA_TcMar-Tc1	256049	256747	210	-	.	.
scaffold914	subtractBed	intrn	256668	257072	.	+	.	Parent=CGI_10018883;
	scaffold914	WUBlastX	DNA_TcMar-Tc1	256668	257072	120	-	.	.
scaffold914	subtractBed	intrn	256049	256633	.	+	.	Parent=CGI_10018883;
	scaffold914	WUBlastX	DNA_TcMar-Tc1	256049	256633	262	-	.	.
scaffold914	subtractBed	intrn	264623	264699	.	+	.	Parent=CGI_10018883;
	scaffold914	TRF	Tandem_Repeat	264623	264699	147	+	.	.
scaffold914	subtractBed	intrn	270306	270586	.	+	.	Parent=CGI_10018883;
	scaffold914	TRF	Tandem_Repeat	270306	270586	244	+	.	.
scaffold914	subtractBed	intrn	270954	271254	.	+	.	Parent=CGI_10018883;
	scaffold914	TRF	Tandem_Repeat	270954	271254	136	+	.	.
scaffold914	subtractBed	intrn	270954	271234	.	+	.	Parent=CGI_10018883;
	scaffold914	TRF	Tandem_Repeat	270954	271234	218	+	.	.
scaffold914	subtractBed	intrn	286914	286941	.	+	.	Parent=CGI_10018885;
	scaffold914	TRF	Tandem_Repeat	286914	286941	56	+	.	.
scaffold914	subtractBed	intrn	309292	309468	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	309292	309468	192	+	.	.
scaffold914	subtractBed	intrn	312477	312508	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	312477	312508	55	+	.	.
scaffold914	subtractBed	intrn	312620	313367	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	312620	313367	948	+	.	.
scaffold914	subtractBed	intrn	315112	315177	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	315112	315177	107	+	.	.
scaffold914	subtractBed	intrn	315113	315174	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	315113	315174	63	+	.	.
scaffold914	subtractBed	intrn	315119	315177	.	+	.	Parent=CGI_10018887;
	scaffold914	TRF	Tandem_Repeat	315119	315177	82	+	.	.
scaffold914	subtractBed	intrn	376862	377817	.	-	.	Parent=CGI_10018889;
	scaffold914	TRF	Tandem_Repeat	376862	377817	1359	+	.	.
scaffold914	subtractBed	intrn	377852	377891	.	-	.	Parent=CGI_10018889;
	scaffold914	TRF	Tandem_Repeat	377852	377891	62	+	.	.
scaffold914	subtractBed	intrn	386960	387151	.	-	.	Parent=CGI_10018890;
	scaffold914	WUBlastX	LINE_CR1	386960	387151	70	+	.	.
scaffold914	subtractBed	intrn	387077	387169	.	-	.	Parent=CGI_10018890;
	scaffold914	WUBlastX	LINE_L2	387077	387169	22	+	.	.
scaffold914	subtractBed	intrn	384548	385525	.	-	.	Parent=CGI_10018890;
	scaffold914	WUBlastX	LINE_CR1	384548	385525	406	+	.	.
scaffold914	subtractBed	intrn	386245	386994	.	-	.	Parent=CGI_10018890;
	scaffold914	WUBlastX	LINE_CR1	386245	386994	625	+	.	.
scaffold914	subtractBed	intrn	384308	385525	.	-	.	Parent=CGI_10018890;
	scaffold914	WUBlastX	LINE_L2	384308	385525	57	+	.	.
scaffold914	subtractBed	intrn	395073	395129	.	+	.	Parent=CGI_10018891;
	scaffold914	TRF	Tandem_Repeat	395073	395129	114	+	.	.
scaffold914	subtractBed	intrn	423662	424125	.	-	.	Parent=CGI_10018892;
	scaffold914	TRF	Tandem_Repeat	423662	424125	423	+	.	.
scaffold914	subtractBed	intrn	423800	423913	.	-	.	Parent=CGI_10018892;
	scaffold914	TRF	Tandem_Repeat	423800	423913	74	+	.	.
scaffold914	subtractBed	intrn	423693	424125	.	-	.	Parent=CGI_10018892;
	scaffold914	TRF	Tandem_Repeat	423693	424125	372	+	.	.
scaffold914	subtractBed	intrn	424581	424627	.	-	.	Parent=CGI_10018892;
	scaffold914	TRF	Tandem_Repeat	424581	424627	94	+	.	.
scaffold914	subtractBed	intrn	450572	450941	.	+	.	Parent=CGI_10018893;
	scaffold914	TRF	Tandem_Repeat	450572	450941	641	+	.	.
scaffold914	subtractBed	intrn	454891	454935	.	+	.	Parent=CGI_10018893;
	scaffold914	TRF	Tandem_Repeat	454891	454935	90	+	.	.
scaffold914	subtractBed	intrn	462578	463489	.	+	.	Parent=CGI_10018893;
	scaffold914	TRF	Tandem_Repeat	462578	463489	1488	+	.	.
scaffold914	subtractBed	intrn	463662	463714	.	+	.	Parent=CGI_10018893;
	scaffold914	TRF	Tandem_Repeat	463662	463714	74	+	.	.
scaffold914	subtractBed	intrn	537475	537556	.	-	.	Parent=CGI_10018900;
	scaffold914	TRF	Tandem_Repeat	537475	537556	56	+	.	.
scaffold914	subtractBed	intrn	537588	537662	.	-	.	Parent=CGI_10018900;
	scaffold914	TRF	Tandem_Repeat	537588	537662	51	+	.	.
scaffold914	subtractBed	intrn	540444	540488	.	-	.	Parent=CGI_10018900;
	scaffold914	TRF	Tandem_Repeat	540444	540488	90	+	.	.
scaffold914	subtractBed	intrn	541394	542159	.	-	.	Parent=CGI_10018900;
	scaffold914	TRF	Tandem_Repeat	541394	542159	998	+	.	.
scaffold914	subtractBed	intrn	558633	558669	.	+	.	Parent=CGI_10018902;
	scaffold914	TRF	Tandem_Repeat	558633	558669	56	+	.	.
scaffold914	subtractBed	intrn	561475	561552	.	+	.	Parent=CGI_10018902;
	scaffold914	TRF	Tandem_Repeat	561475	561552	149	+	.	.
scaffold914	subtractBed	intrn	563558	563820	.	+	.	Parent=CGI_10018902;
	scaffold914	TRF	Tandem_Repeat	563525	563820	457	+	.	.
scaffold914	subtractBed	intrn	572975	573190	.	+	.	Parent=CGI_10018903;
	scaffold914	WUBlastX	LINE_RTE-X	572975	573190	40	-	.	.
scaffold916	subtractBed	intrn	32569	33320	.	-	.	Parent=CGI_10009055;
	scaffold916	TRF	Tandem_Repeat	32569	33320	637	+	.	.
scaffold916	subtractBed	intrn	134985	135164	.	+	.	Parent=CGI_10009060;
	scaffold916	TRF	Tandem_Repeat	134985	135164	252	+	.	.
scaffold917	subtractBed	intrn	23457	23503	.	+	.	Parent=CGI_10011082;
	scaffold917	TRF	Tandem_Repeat	23457	23503	94	+	.	.
scaffold917	subtractBed	intrn	26392	26432	.	+	.	Parent=CGI_10011082;
	scaffold917	TRF	Tandem_Repeat	26392	26432	82	+	.	.
scaffold917	subtractBed	intrn	27448	27479	.	+	.	Parent=CGI_10011082;
	scaffold917	TRF	Tandem_Repeat	27448	27479	55	+	.	.
scaffold917	subtractBed	intrn	122615	122640	.	+	.	Parent=CGI_10011083;
	scaffold917	TRF	Tandem_Repeat	122615	122640	52	+	.	.
scaffold917	subtractBed	intrn	132093	132138	.	+	.	Parent=CGI_10011083;
	scaffold917	TRF	Tandem_Repeat	132093	132138	83	+	.	.
scaffold917	subtractBed	intrn	134339	134881	.	+	.	Parent=CGI_10011083;
	scaffold917	WUBlastX	DNA_Sola	134339	134881	303	+	.	.
scaffold917	subtractBed	intrn	136154	136428	.	+	.	Parent=CGI_10011083;
	scaffold917	TRF	Tandem_Repeat	136154	136428	252	+	.	.
scaffold917	subtractBed	intrn	141621	141839	.	+	.	Parent=CGI_10011083;
	scaffold917	TRF	Tandem_Repeat	141621	141839	368	+	.	.
scaffold917	subtractBed	intrn	135213	135728	.	+	.	Parent=CGI_10011083;
	scaffold917	WUBlastX	DNA_Sola	135213	135728	155	+	.	.
scaffold917	subtractBed	intrn	148880	149065	.	+	.	Parent=CGI_10011083;
	scaffold917	WUBlastX	DNA_IS4EU	148880	149065	98	+	.	.
scaffold917	subtractBed	intrn	149169	149921	.	+	.	Parent=CGI_10011083;
	scaffold917	WUBlastX	DNA_Kolobok-IS4	149169	149921	322	-	.	.
scaffold917	subtractBed	intrn	148533	148595	.	+	.	Parent=CGI_10011083;
	scaffold917	WUBlastX	DNA_IS4EU	148533	148595	30	+	.	.
scaffold917	subtractBed	intrn	151304	151366	.	-	.	Parent=CGI_10011084;
	scaffold917	TRF	Tandem_Repeat	151304	151366	126	+	.	.
scaffold917	subtractBed	intrn	151372	151818	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Crypton	151372	151818	49	-	.	.
scaffold917	subtractBed	intrn	154104	154217	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	154104	154217	122	+	.	.
scaffold917	subtractBed	intrn	154620	154829	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	154620	154829	134	+	.	.
scaffold917	subtractBed	intrn	155076	155267	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	155076	155267	54	+	.	.
scaffold917	subtractBed	intrn	155058	155315	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	155058	155315	21	+	.	.
scaffold917	subtractBed	intrn	154683	154859	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	154683	154859	48	+	.	.
scaffold917	subtractBed	intrn	154430	154546	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Harbinger	154430	154546	41	+	.	.
scaffold917	subtractBed	intrn	162383	162568	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	LINE_L2	162383	162568	46	+	.	.
scaffold917	subtractBed	intrn	162075	162368	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	LINE_CR1-L2	162075	162368	98	+	.	.
scaffold917	subtractBed	intrn	161916	162362	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	LINE_L1	161916	162362	66	+	.	.
scaffold917	subtractBed	intrn	164060	164139	.	-	.	Parent=CGI_10011084;
	scaffold917	TRF	Tandem_Repeat	164060	164139	52	+	.	.
scaffold917	subtractBed	intrn	172677	172850	.	-	.	Parent=CGI_10011084;
	scaffold917	TRF	Tandem_Repeat	172677	172850	208	+	.	.
scaffold917	subtractBed	intrn	177161	177330	.	-	.	Parent=CGI_10011084;
	scaffold917	TRF	Tandem_Repeat	177161	177330	277	+	.	.
scaffold917	subtractBed	intrn	175485	175619	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	LINE_RTE-X	175485	175619	34	-	.	.
scaffold917	subtractBed	intrn	175652	175738	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	LINE_RTE-X	175652	175738	50	-	.	.
scaffold917	subtractBed	intrn	178895	178933	.	-	.	Parent=CGI_10011084;
	scaffold917	TRF	Tandem_Repeat	178895	178933	78	+	.	.
scaffold917	subtractBed	intrn	178939	179090	.	-	.	Parent=CGI_10011084;
	scaffold917	WUBlastX	DNA_Crypton	178939	179385	48	-	.	.
scaffold917	subtractBed	intrn	191593	192624	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	191593	192624	1411	+	.	.
scaffold917	subtractBed	intrn	198243	198536	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	198243	198536	516	+	.	.
scaffold917	subtractBed	intrn	203904	204183	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	203904	204183	261	+	.	.
scaffold917	subtractBed	intrn	204999	205055	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	204999	205055	114	+	.	.
scaffold917	subtractBed	intrn	205708	206089	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	205708	206089	665	+	.	.
scaffold917	subtractBed	intrn	207322	207655	.	+	.	Parent=CGI_10011087;
	scaffold917	TRF	Tandem_Repeat	207322	207655	507	+	.	.
scaffold917	subtractBed	intrn	217971	218290	.	-	.	Parent=CGI_10011088;
	scaffold917	TRF	Tandem_Repeat	217960	218290	527	+	.	.
scaffold917	subtractBed	intrn	219204	219707	.	-	.	Parent=CGI_10011088;
	scaffold917	TRF	Tandem_Repeat	219204	219707	796	+	.	.
scaffold917	subtractBed	intrn	219891	220095	.	-	.	Parent=CGI_10011088;
	scaffold917	TRF	Tandem_Repeat	219891	220095	304	+	.	.
scaffold917	subtractBed	intrn	219889	220585	.	-	.	Parent=CGI_10011088;
	scaffold917	TRF	Tandem_Repeat	219889	220585	465	+	.	.
scaffold917	subtractBed	intrn	222578	222625	.	-	.	Parent=CGI_10011088;
	scaffold917	TRF	Tandem_Repeat	222578	222625	89	+	.	.
scaffold917	subtractBed	intrn	274649	274710	.	+	.	Parent=CGI_10011091;
	scaffold917	TRF	Tandem_Repeat	274649	274710	117	+	.	.
scaffold922	subtractBed	intrn	31238	31417	.	-	.	Parent=CGI_10005661;
	scaffold922	WUBlastX	LINE_L2	31238	31417	60	-	.	.
scaffold922	subtractBed	intrn	38076	38168	.	-	.	Parent=CGI_10005661;
	scaffold922	TRF	Tandem_Repeat	38076	38168	170	+	.	.
scaffold922	subtractBed	intrn	38683	38730	.	-	.	Parent=CGI_10005661;
	scaffold922	TRF	Tandem_Repeat	38683	38730	96	+	.	.
scaffold922	subtractBed	intrn	40132	40216	.	-	.	Parent=CGI_10005661;
	scaffold922	TRF	Tandem_Repeat	40132	40216	129	+	.	.
scaffold922	subtractBed	intrn	40417	40450	.	-	.	Parent=CGI_10005661;
	scaffold922	TRF	Tandem_Repeat	40417	40450	59	+	.	.
scaffold922	subtractBed	intrn	71642	71686	.	-	.	Parent=CGI_10005662;
	scaffold922	TRF	Tandem_Repeat	71642	71686	90	+	.	.
scaffold922	subtractBed	intrn	77465	77526	.	-	.	Parent=CGI_10005662;
	scaffold922	TRF	Tandem_Repeat	77465	77526	124	+	.	.
scaffold922	subtractBed	intrn	93466	93876	.	-	.	Parent=CGI_10005662;
	scaffold922	WUBlastX	DNA_Harbinger	93466	93876	71	-	.	.
scaffold922	subtractBed	intrn	87005	87169	.	-	.	Parent=CGI_10005662;
	scaffold922	WUBlastX	LINE_CR1-L2	87005	87169	89	-	.	.
scaffold922	subtractBed	intrn	93484	94032	.	-	.	Parent=CGI_10005662;
	scaffold922	WUBlastX	DNA_Harbinger	93484	94032	55	-	.	.
scaffold922	subtractBed	intrn	86966	87169	.	-	.	Parent=CGI_10005662;
	scaffold922	WUBlastX	LINE_CR1-L2	86966	87169	77	-	.	.
scaffold923	subtractBed	intrn	51965	52303	.	-	.	Parent=CGI_10008128;
	scaffold923	TRF	Tandem_Repeat	51965	52303	360	+	.	.
scaffold923	subtractBed	intrn	53734	53858	.	-	.	Parent=CGI_10008128;
	scaffold923	TRF	Tandem_Repeat	53734	53858	74	+	.	.
scaffold923	subtractBed	intrn	54634	54691	.	-	.	Parent=CGI_10008128;
	scaffold923	TRF	Tandem_Repeat	54634	54691	89	+	.	.
scaffold923	subtractBed	intrn	57659	57711	.	-	.	Parent=CGI_10008128;
	scaffold923	TRF	Tandem_Repeat	57659	57711	79	+	.	.
scaffold923	subtractBed	intrn	172274	172338	.	-	.	Parent=CGI_10008130;
	scaffold923	TRF	Tandem_Repeat	172274	172338	130	+	.	.
scaffold924	subtractBed	intrn	40732	40798	.	+	.	Parent=CGI_10006838;
	scaffold924	WUBlastX	DNA_Sola	40732	40965	34	+	.	.
scaffold925	subtractBed	intrn	19617	19641	.	-	.	Parent=CGI_10017409;
	scaffold925	TRF	Tandem_Repeat	19617	19641	50	+	.	.
scaffold925	subtractBed	intrn	127659	127994	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Pao	127659	127994	52	+	.	.
scaffold925	subtractBed	intrn	127719	128678	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Pao	127719	128678	390	+	.	.
scaffold925	subtractBed	intrn	128406	130037	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Pao	128406	130037	628	+	.	.
scaffold925	subtractBed	intrn	128706	131678	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Pao	128706	131678	2481	+	.	.
scaffold925	subtractBed	intrn	141622	142515	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Gypsy	141622	142515	137	-	.	.
scaffold925	subtractBed	intrn	140354	141217	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_DIRS	140354	141217	326	-	.	.
scaffold925	subtractBed	intrn	141226	142380	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_DIRS	141226	142380	729	-	.	.
scaffold925	subtractBed	intrn	140016	140459	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_DIRS	140016	140459	146	-	.	.
scaffold925	subtractBed	intrn	142660	142752	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_Gypsy	142660	142752	22	-	.	.
scaffold925	subtractBed	intrn	140537	141205	.	-	.	Parent=CGI_10017412;
	scaffold925	WUBlastX	LTR_DIRS	140537	141205	390	-	.	.
scaffold925	subtractBed	intrn	169681	170635	.	-	.	Parent=CGI_10017416;
	scaffold925	TRF	Tandem_Repeat	169681	170635	1094	+	.	.
scaffold925	subtractBed	intrn	169681	170635	.	-	.	Parent=CGI_10017416;
	scaffold925	TRF	Tandem_Repeat	169681	170635	1130	+	.	.
scaffold925	subtractBed	intrn	174741	174803	.	-	.	Parent=CGI_10017416;
	scaffold925	TRF	Tandem_Repeat	174741	174803	126	+	.	.
scaffold925	subtractBed	intrn	175003	175077	.	-	.	Parent=CGI_10017416;
	scaffold925	TRF	Tandem_Repeat	175003	175077	134	+	.	.
scaffold925	subtractBed	intrn	191014	191178	.	-	.	Parent=CGI_10017418;
	scaffold925	TRF	Tandem_Repeat	191014	191192	137	+	.	.
scaffold925	subtractBed	intrn	198891	199361	.	-	.	Parent=CGI_10017418;
	scaffold925	WUBlastX	LINE_RTE-X	198891	199361	168	+	.	.
scaffold925	subtractBed	intrn	199011	199331	.	-	.	Parent=CGI_10017418;
	scaffold925	WUBlastX	LINE_RTE-X	199011	199331	238	+	.	.
scaffold925	subtractBed	intrn	199569	200096	.	-	.	Parent=CGI_10017418;
	scaffold925	WUBlastX	LINE_RTE-X	199569	200096	83	+	.	.
scaffold925	subtractBed	intrn	198795	199334	.	-	.	Parent=CGI_10017418;
	scaffold925	WUBlastX	LINE_L2	198795	199334	96	+	.	.
scaffold925	subtractBed	intrn	228857	228884	.	+	.	Parent=CGI_10017420;
	scaffold925	TRF	Tandem_Repeat	228857	228884	56	+	.	.
scaffold925	subtractBed	intrn	225506	225646	.	+	.	Parent=CGI_10017420;
	scaffold925	WUBlastX	LINE_L1-Tx1	225506	225646	78	+	.	.
scaffold925	subtractBed	intrn	225639	225800	.	+	.	Parent=CGI_10017420;
	scaffold925	WUBlastX	LINE_L1-Tx1	225639	225800	74	+	.	.
scaffold925	subtractBed	intrn	225354	225455	.	+	.	Parent=CGI_10017420;
	scaffold925	WUBlastX	LINE_L1-Tx1	225354	225455	45	+	.	.
scaffold925	subtractBed	intrn	234954	235418	.	+	.	Parent=CGI_10017421;
	scaffold925	WUBlastX	LINE_CR1	234954	235418	117	-	.	.
scaffold925	subtractBed	intrn	249021	250142	.	-	.	Parent=CGI_10017422;
	scaffold925	WUBlastX	LTR_Gypsy-Cigr	249021	250142	402	-	.	.
scaffold925	subtractBed	intrn	246439	249018	.	-	.	Parent=CGI_10017422;
	scaffold925	WUBlastX	LTR_Gypsy-Cigr	246439	249018	1667	-	.	.
scaffold925	subtractBed	intrn	250398	251159	.	-	.	Parent=CGI_10017422;
	scaffold925	WUBlastX	LTR_Gypsy-Cigr	250398	251159	193	-	.	.
scaffold925	subtractBed	intrn	249021	250439	.	-	.	Parent=CGI_10017422;
	scaffold925	WUBlastX	LTR_Gypsy	249021	250439	207	-	.	.
scaffold925	subtractBed	intrn	279893	279926	.	-	.	Parent=CGI_10017423;
	scaffold925	TRF	Tandem_Repeat	279893	279926	50	+	.	.
scaffold925	subtractBed	intrn	280620	280835	.	-	.	Parent=CGI_10017423;
	scaffold925	WUBlastX	DNA_Sola	280620	280835	85	+	.	.
scaffold925	subtractBed	intrn	281938	282513	.	-	.	Parent=CGI_10017423;
	scaffold925	WUBlastX	DNA_Sola	281938	282513	342	+	.	.
scaffold925	subtractBed	intrn	283613	284236	.	-	.	Parent=CGI_10017423;
	scaffold925	WUBlastX	DNA_Sola	283613	284236	163	+	.	.
scaffold925	subtractBed	intrn	282772	282957	.	-	.	Parent=CGI_10017423;
	scaffold925	WUBlastX	DNA_Sola	282772	282957	76	+	.	.
scaffold925	subtractBed	intrn	282703	282954	.	-	.	Parent=CGI_10017423;
	scaffold925	WUBlastX	DNA_Sola	282703	282954	45	+	.	.
scaffold925	subtractBed	intrn	292010	292037	.	-	.	Parent=CGI_10017423;
	scaffold925	TRF	Tandem_Repeat	292010	292037	56	+	.	.
scaffold925	subtractBed	intrn	297798	297827	.	-	.	Parent=CGI_10017423;
	scaffold925	TRF	Tandem_Repeat	297798	297827	60	+	.	.
scaffold925	subtractBed	intrn	292010	292037	.	+	.	Parent=CGI_10017424;
	scaffold925	TRF	Tandem_Repeat	292010	292037	56	+	.	.
scaffold925	subtractBed	intrn	297798	297827	.	+	.	Parent=CGI_10017424;
	scaffold925	TRF	Tandem_Repeat	297798	297827	60	+	.	.
scaffold925	subtractBed	intrn	379223	379257	.	+	.	Parent=CGI_10017426;
	scaffold925	TRF	Tandem_Repeat	379223	379257	52	+	.	.
scaffold925	subtractBed	intrn	379696	379781	.	+	.	Parent=CGI_10017426;
	scaffold925	TRF	Tandem_Repeat	379696	379781	172	+	.	.
scaffold925	subtractBed	intrn	380224	380361	.	+	.	Parent=CGI_10017426;
	scaffold925	WUBlastX	LINE_RTE-X	380224	380361	86	+	.	.
scaffold925	subtractBed	intrn	379884	379952	.	+	.	Parent=CGI_10017426;
	scaffold925	WUBlastX	LINE_RTE-X	379884	379952	21	+	.	.
scaffold925	subtractBed	intrn	380209	380379	.	+	.	Parent=CGI_10017426;
	scaffold925	WUBlastX	LINE_RTE-X	380209	380379	61	+	.	.
scaffold925	subtractBed	intrn	434866	434975	.	+	.	Parent=CGI_10017428;
	scaffold925	TRF	Tandem_Repeat	434866	434975	80	+	.	.
scaffold925	subtractBed	intrn	434866	434973	.	+	.	Parent=CGI_10017428;
	scaffold925	TRF	Tandem_Repeat	434866	434973	92	+	.	.
scaffold925	subtractBed	intrn	438641	438928	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	438641	438928	171	+	.	.
scaffold925	subtractBed	intrn	438954	439073	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	438954	439073	44	+	.	.
scaffold925	subtractBed	intrn	442205	442345	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	442205	442345	28	+	.	.
scaffold925	subtractBed	intrn	438433	438597	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	438433	438597	44	+	.	.
scaffold925	subtractBed	intrn	438620	438964	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	438620	438964	104	+	.	.
scaffold925	subtractBed	intrn	441891	442088	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	441891	442088	125	+	.	.
scaffold925	subtractBed	intrn	441575	441886	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	441575	441886	99	+	.	.
scaffold925	subtractBed	intrn	438927	439280	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	438927	439280	21	+	.	.
scaffold925	subtractBed	intrn	440751	441569	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	440751	441569	216	+	.	.
scaffold925	subtractBed	intrn	442486	442668	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	442486	442668	100	+	.	.
scaffold925	subtractBed	intrn	441891	442487	.	+	.	Parent=CGI_10017428;
	scaffold925	WUBlastX	LTR_DIRS	441891	442487	27	+	.	.
scaffold926	subtractBed	intrn	256107	256275	.	-	.	Parent=CGI_10011369;
	scaffold926	TRF	Tandem_Repeat	256107	256275	338	+	.	.
scaffold929	subtractBed	intrn	124656	125306	.	+	.	Parent=CGI_10006345;
	scaffold929	WUBlastX	LINE_CR1-L2	124656	125306	26	+	.	.
scaffold929	subtractBed	intrn	124599	124916	.	+	.	Parent=CGI_10006345;
	scaffold929	WUBlastX	LINE_CR1-L2	124599	124916	43	+	.	.
scaffold929	subtractBed	intrn	124656	124916	.	+	.	Parent=CGI_10006345;
	scaffold929	WUBlastX	LINE_CR1-L2	124656	124916	69	+	.	.
scaffold929	subtractBed	intrn	147723	147778	.	+	.	Parent=CGI_10006347;
	scaffold929	TRF	Tandem_Repeat	147723	147778	112	+	.	.
scaffold93	subtractBed	intrn	1754	2139	.	-	.	Parent=CGI_10002717;
	scaffold93	TRF	Tandem_Repeat	1754	2139	335	+	.	.
scaffold93	subtractBed	intrn	6375	6429	.	-	.	Parent=CGI_10002717;
	scaffold93	TRF	Tandem_Repeat	6375	6429	85	+	.	.
scaffold930	subtractBed	intrn	27251	27277	.	-	.	Parent=CGI_10010185;
	scaffold930	TRF	Tandem_Repeat	27251	27277	54	+	.	.
scaffold930	subtractBed	intrn	58511	58692	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	58511	58692	105	+	.	.
scaffold930	subtractBed	intrn	58502	58689	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	58502	58689	135	+	.	.
scaffold930	subtractBed	intrn	59821	59854	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	59821	59854	68	+	.	.
scaffold930	subtractBed	intrn	63139	63182	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	63139	63182	88	+	.	.
scaffold930	subtractBed	intrn	63182	63234	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	63182	63234	106	+	.	.
scaffold930	subtractBed	intrn	68439	68479	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	68439	68479	64	+	.	.
scaffold930	subtractBed	intrn	72186	72286	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	72186	72286	177	+	.	.
scaffold930	subtractBed	intrn	72445	72472	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	72445	72472	56	+	.	.
scaffold930	subtractBed	intrn	75908	75972	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	75908	75972	85	+	.	.
scaffold930	subtractBed	intrn	75908	75972	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	75908	75972	94	+	.	.
scaffold930	subtractBed	intrn	75908	75959	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	75908	75959	68	+	.	.
scaffold930	subtractBed	intrn	75917	75972	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	75917	75972	67	+	.	.
scaffold930	subtractBed	intrn	90347	90384	.	-	.	Parent=CGI_10010189;
	scaffold930	TRF	Tandem_Repeat	90347	90384	76	+	.	.
scaffold930	subtractBed	intrn	124583	124649	.	-	.	Parent=CGI_10010191;
	scaffold930	TRF	Tandem_Repeat	124583	124649	89	+	.	.
scaffold930	subtractBed	intrn	127041	127095	.	-	.	Parent=CGI_10010191;
	scaffold930	TRF	Tandem_Repeat	127041	127095	110	+	.	.
scaffold930	subtractBed	intrn	156666	156728	.	+	.	Parent=CGI_10010193;
	scaffold930	TRF	Tandem_Repeat	156666	156728	126	+	.	.
scaffold930	subtractBed	intrn	157058	157117	.	+	.	Parent=CGI_10010193;
	scaffold930	TRF	Tandem_Repeat	157058	157117	111	+	.	.
scaffold930	subtractBed	intrn	161659	161686	.	+	.	Parent=CGI_10010193;
	scaffold930	TRF	Tandem_Repeat	161659	161686	56	+	.	.
scaffold930	subtractBed	intrn	169578	169609	.	-	.	Parent=CGI_10010194;
	scaffold930	TRF	Tandem_Repeat	169578	169609	64	+	.	.
scaffold930	subtractBed	intrn	173292	173341	.	-	.	Parent=CGI_10010194;
	scaffold930	TRF	Tandem_Repeat	173292	173341	100	+	.	.
scaffold930	subtractBed	intrn	169578	169609	.	+	.	Parent=CGI_10010195;
	scaffold930	TRF	Tandem_Repeat	169578	169609	64	+	.	.
scaffold930	subtractBed	intrn	192930	192979	.	-	.	Parent=CGI_10010196;
	scaffold930	TRF	Tandem_Repeat	192930	192979	100	+	.	.
scaffold930	subtractBed	intrn	237634	237736	.	-	.	Parent=CGI_10010203;
	scaffold930	TRF	Tandem_Repeat	237634	237736	118	+	.	.
scaffold930	subtractBed	intrn	237645	237804	.	-	.	Parent=CGI_10010203;
	scaffold930	TRF	Tandem_Repeat	237645	237804	158	+	.	.
scaffold930	subtractBed	intrn	237803	237927	.	-	.	Parent=CGI_10010203;
	scaffold930	TRF	Tandem_Repeat	237803	237927	106	+	.	.
scaffold930	subtractBed	intrn	239848	240240	.	-	.	Parent=CGI_10010203;
	scaffold930	WUBlastX	DNA_Merlin	239848	240240	26	+	.	.
scaffold930	subtractBed	intrn	241083	241574	.	-	.	Parent=CGI_10010203;
	scaffold930	WUBlastX	DNA_Merlin	241083	241574	292	+	.	.
scaffold930	subtractBed	intrn	240001	240234	.	-	.	Parent=CGI_10010203;
	scaffold930	WUBlastX	DNA_Merlin	240001	240234	40	+	.	.
scaffold932	subtractBed	intrn	82050	82798	.	-	.	Parent=CGI_10006173;
	scaffold932	TRF	Tandem_Repeat	82050	82798	526	+	.	.
scaffold932	subtractBed	intrn	82144	82798	.	-	.	Parent=CGI_10006173;
	scaffold932	TRF	Tandem_Repeat	82144	82798	576	+	.	.
scaffold932	subtractBed	intrn	82097	82798	.	-	.	Parent=CGI_10006173;
	scaffold932	TRF	Tandem_Repeat	82097	82798	644	+	.	.
scaffold932	subtractBed	intrn	84270	84446	.	-	.	Parent=CGI_10006173;
	scaffold932	TRF	Tandem_Repeat	84270	84446	300	+	.	.
scaffold932	subtractBed	intrn	97995	98815	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	97995	98815	1115	+	.	.
scaffold932	subtractBed	intrn	100070	100325	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	100070	100325	485	+	.	.
scaffold932	subtractBed	intrn	100456	100666	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	100456	100666	323	+	.	.
scaffold932	subtractBed	intrn	109318	109693	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	109318	109693	468	+	.	.
scaffold932	subtractBed	intrn	109732	109863	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	109732	109863	194	+	.	.
scaffold932	subtractBed	intrn	111959	112676	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	111959	112676	1116	+	.	.
scaffold932	subtractBed	intrn	118130	118519	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	118130	118519	619	+	.	.
scaffold932	subtractBed	intrn	120040	121557	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	120040	121557	1339	+	.	.
scaffold932	subtractBed	intrn	120875	121099	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	120875	121099	59	+	.	.
scaffold932	subtractBed	intrn	121035	121459	.	+	.	Parent=CGI_10006174;
	scaffold932	TRF	Tandem_Repeat	121035	121459	71	+	.	.
scaffold933	subtractBed	intrn	43018	43074	.	-	.	Parent=CGI_10016706;
	scaffold933	TRF	Tandem_Repeat	43018	43074	114	+	.	.
scaffold933	subtractBed	intrn	49002	49236	.	-	.	Parent=CGI_10016706;
	scaffold933	TRF	Tandem_Repeat	49002	49236	337	+	.	.
scaffold933	subtractBed	intrn	50602	50992	.	-	.	Parent=CGI_10016706;
	scaffold933	TRF	Tandem_Repeat	50602	50996	634	+	.	.
scaffold933	subtractBed	intrn	51962	52093	.	-	.	Parent=CGI_10016706;
	scaffold933	TRF	Tandem_Repeat	51962	52093	215	+	.	.
scaffold933	subtractBed	intrn	58238	58584	.	-	.	Parent=CGI_10016706;
	scaffold933	TRF	Tandem_Repeat	58238	58584	342	+	.	.
scaffold933	subtractBed	intrn	69134	69164	.	+	.	Parent=CGI_10016707;
	scaffold933	TRF	Tandem_Repeat	69134	69164	62	+	.	.
scaffold933	subtractBed	intrn	70764	70936	.	+	.	Parent=CGI_10016707;
	scaffold933	TRF	Tandem_Repeat	70764	70936	127	+	.	.
scaffold933	subtractBed	intrn	101922	102251	.	-	.	Parent=CGI_10016709;
	scaffold933	TRF	Tandem_Repeat	101922	102251	464	+	.	.
scaffold933	subtractBed	intrn	112465	113401	.	-	.	Parent=CGI_10016711;
	scaffold933	TRF	Tandem_Repeat	112465	113401	1349	+	.	.
scaffold933	subtractBed	intrn	113595	113710	.	-	.	Parent=CGI_10016711;
	scaffold933	TRF	Tandem_Repeat	113595	113710	216	+	.	.
scaffold933	subtractBed	intrn	117272	117478	.	-	.	Parent=CGI_10016711;
	scaffold933	TRF	Tandem_Repeat	117272	117478	231	+	.	.
scaffold933	subtractBed	intrn	173228	173259	.	-	.	Parent=CGI_10016713;
	scaffold933	TRF	Tandem_Repeat	173228	173259	64	+	.	.
scaffold933	subtractBed	intrn	282141	282442	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	282141	282442	278	+	.	.
scaffold933	subtractBed	intrn	282568	282600	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	282568	282600	57	+	.	.
scaffold933	subtractBed	intrn	284687	284730	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	284687	284730	70	+	.	.
scaffold933	subtractBed	intrn	285812	286126	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	285812	286126	448	+	.	.
scaffold933	subtractBed	intrn	285847	285982	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	285847	285982	60	+	.	.
scaffold933	subtractBed	intrn	285812	286126	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	285812	286126	444	+	.	.
scaffold933	subtractBed	intrn	287173	287286	.	-	.	Parent=CGI_10016718;
	scaffold933	TRF	Tandem_Repeat	287166	287286	149	+	.	.
scaffold933	subtractBed	intrn	285812	286126	.	+	.	Parent=CGI_10016719;
	scaffold933	TRF	Tandem_Repeat	285812	286126	448	+	.	.
scaffold933	subtractBed	intrn	285847	285982	.	+	.	Parent=CGI_10016719;
	scaffold933	TRF	Tandem_Repeat	285847	285982	60	+	.	.
scaffold933	subtractBed	intrn	285812	286126	.	+	.	Parent=CGI_10016719;
	scaffold933	TRF	Tandem_Repeat	285812	286126	444	+	.	.
scaffold933	subtractBed	intrn	287173	287286	.	+	.	Parent=CGI_10016719;
	scaffold933	TRF	Tandem_Repeat	287166	287286	149	+	.	.
scaffold933	subtractBed	intrn	317542	317613	.	+	.	Parent=CGI_10016721;
	scaffold933	TRF	Tandem_Repeat	317542	317613	99	+	.	.
scaffold933	subtractBed	intrn	318784	319017	.	+	.	Parent=CGI_10016721;
	scaffold933	TRF	Tandem_Repeat	318784	319017	152	+	.	.
scaffold933	subtractBed	intrn	320934	321002	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_L2	320907	321002	24	+	.	.
scaffold933	subtractBed	intrn	322242	323891	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_RTE-X	322242	323891	210	+	.	.
scaffold933	subtractBed	intrn	321701	322237	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_RTE-X	321701	322237	111	+	.	.
scaffold933	subtractBed	intrn	322257	323393	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_RTE-X	322257	323393	239	+	.	.
scaffold933	subtractBed	intrn	321608	322141	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_L1	321608	322141	78	+	.	.
scaffold933	subtractBed	intrn	321382	321417	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_RTE-X	321382	321417	23	+	.	.
scaffold933	subtractBed	intrn	321833	322237	.	+	.	Parent=CGI_10016722;
	scaffold933	WUBlastX	LINE_L1	321833	322237	117	+	.	.
scaffold933	subtractBed	intrn	324128	324168	.	+	.	Parent=CGI_10016722;
	scaffold933	TRF	Tandem_Repeat	324128	324168	73	+	.	.
scaffold933	subtractBed	intrn	324988	325016	.	+	.	Parent=CGI_10016722;
	scaffold933	TRF	Tandem_Repeat	324988	325016	58	+	.	.
scaffold933	subtractBed	intrn	328005	328124	.	+	.	Parent=CGI_10016722;
	scaffold933	TRF	Tandem_Repeat	328005	328124	82	+	.	.
scaffold933	subtractBed	intrn	342062	342268	.	+	.	Parent=CGI_10016723;
	scaffold933	TRF	Tandem_Repeat	342062	342268	166	+	.	.
scaffold933	subtractBed	intrn	343207	343244	.	+	.	Parent=CGI_10016723;
	scaffold933	TRF	Tandem_Repeat	343207	343244	76	+	.	.
scaffold933	subtractBed	intrn	360669	360905	.	+	.	Parent=CGI_10016724;
	scaffold933	TRF	Tandem_Repeat	360659	360905	190	+	.	.
scaffold933	subtractBed	intrn	360669	360905	.	+	.	Parent=CGI_10016724;
	scaffold933	TRF	Tandem_Repeat	360659	360905	221	+	.	.
scaffold933	subtractBed	intrn	369870	369949	.	+	.	Parent=CGI_10016725;
	scaffold933	TRF	Tandem_Repeat	369870	369949	160	+	.	.
scaffold933	subtractBed	intrn	432603	432606	.	+	.	Parent=CGI_10016726;
	scaffold933	WUBlastX	DNA_Zator	432603	433148	145	+	.	.
scaffold933	subtractBed	intrn	442785	442904	.	+	.	Parent=CGI_10016727;
	scaffold933	WUBlastX	DNA_En-Spm	442785	442904	119	-	.	.
scaffold933	subtractBed	intrn	442961	443089	.	+	.	Parent=CGI_10016727;
	scaffold933	WUBlastX	DNA_En-Spm	442961	443089	45	-	.	.
scaffold933	subtractBed	intrn	442066	442785	.	+	.	Parent=CGI_10016727;
	scaffold933	WUBlastX	DNA_En-Spm	442066	442785	122	-	.	.
scaffold933	subtractBed	intrn	446954	447075	.	+	.	Parent=CGI_10016727;
	scaffold933	TRF	Tandem_Repeat	446954	447075	105	+	.	.
scaffold933	subtractBed	intrn	446933	447095	.	+	.	Parent=CGI_10016727;
	scaffold933	TRF	Tandem_Repeat	446933	447095	91	+	.	.
scaffold933	subtractBed	intrn	445226	445285	.	+	.	Parent=CGI_10016727;
	scaffold933	WUBlastX	DNA_Harbinger	445226	445285	38	-	.	.
scaffold933	subtractBed	intrn	445285	445491	.	+	.	Parent=CGI_10016727;
	scaffold933	WUBlastX	DNA_Harbinger	445285	445491	97	-	.	.
scaffold934	subtractBed	intrn	29099	29151	.	-	.	Parent=CGI_10015429;
	scaffold934	TRF	Tandem_Repeat	29099	29151	61	+	.	.
scaffold934	subtractBed	intrn	32890	33627	.	-	.	Parent=CGI_10015429;
	scaffold934	TRF	Tandem_Repeat	32890	33627	931	+	.	.
scaffold934	subtractBed	intrn	32890	33627	.	+	.	Parent=CGI_10015430;
	scaffold934	TRF	Tandem_Repeat	32890	33627	931	+	.	.
scaffold934	subtractBed	intrn	87234	87259	.	-	.	Parent=CGI_10015436;
	scaffold934	TRF	Tandem_Repeat	87234	87259	52	+	.	.
scaffold934	subtractBed	intrn	110356	110536	.	-	.	Parent=CGI_10015437;
	scaffold934	TRF	Tandem_Repeat	110356	110536	182	+	.	.
scaffold934	subtractBed	intrn	110535	110713	.	-	.	Parent=CGI_10015437;
	scaffold934	TRF	Tandem_Repeat	110535	110713	198	+	.	.
scaffold934	subtractBed	intrn	110535	110713	.	-	.	Parent=CGI_10015437;
	scaffold934	TRF	Tandem_Repeat	110535	110713	119	+	.	.
scaffold934	subtractBed	intrn	142608	143804	.	+	.	Parent=CGI_10015440;
	scaffold934	TRF	Tandem_Repeat	142608	143804	1692	+	.	.
scaffold934	subtractBed	intrn	167345	167388	.	-	.	Parent=CGI_10015442;
	scaffold934	TRF	Tandem_Repeat	167345	167388	72	+	.	.
scaffold934	subtractBed	intrn	170007	170135	.	-	.	Parent=CGI_10015442;
	scaffold934	TRF	Tandem_Repeat	170007	170135	59	+	.	.
scaffold934	subtractBed	intrn	178688	178731	.	-	.	Parent=CGI_10015442;
	scaffold934	TRF	Tandem_Repeat	178688	178731	61	+	.	.
scaffold934	subtractBed	intrn	245605	245904	.	+	.	Parent=CGI_10015445;
	scaffold934	WUBlastX	LINE_L1	245605	245904	37	+	.	.
scaffold934	subtractBed	intrn	245509	245913	.	+	.	Parent=CGI_10015445;
	scaffold934	WUBlastX	LINE_L1-Tx1	245509	245913	33	+	.	.
scaffold934	subtractBed	intrn	269313	269339	.	-	.	Parent=CGI_10015446;
	scaffold934	TRF	Tandem_Repeat	269313	269339	54	+	.	.
scaffold934	subtractBed	intrn	267998	268144	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_RTE-BovB	267998	268144	54	-	.	.
scaffold934	subtractBed	intrn	266708	268096	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_L1-Tx1	266708	268096	232	-	.	.
scaffold934	subtractBed	intrn	264057	264536	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LTR_DIRS	264057	264536	60	+	.	.
scaffold934	subtractBed	intrn	268913	269038	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_RTE-BovB	268913	269038	23	-	.	.
scaffold934	subtractBed	intrn	265466	265963	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_L1-Tx1	265466	265963	54	-	.	.
scaffold934	subtractBed	intrn	267071	268096	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_L1-Tx1	267071	268096	374	-	.	.
scaffold934	subtractBed	intrn	271497	271604	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	RC_Helitron	271497	271604	45	+	.	.
scaffold934	subtractBed	intrn	271640	271801	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	RC_Helitron	271640	271801	71	+	.	.
scaffold934	subtractBed	intrn	266073	266222	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_L1-Tx1	266073	266222	44	-	.	.
scaffold934	subtractBed	intrn	264246	264545	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LTR_DIRS	264246	264545	84	+	.	.
scaffold934	subtractBed	intrn	267995	268120	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	LINE_L1	267995	268120	64	-	.	.
scaffold934	subtractBed	intrn	271455	271595	.	-	.	Parent=CGI_10015446;
	scaffold934	WUBlastX	RC_Helitron	271455	271595	36	+	.	.
scaffold934	subtractBed	intrn	283590	283614	.	+	.	Parent=CGI_10015447;
	scaffold934	TRF	Tandem_Repeat	283590	283614	50	+	.	.
scaffold934	subtractBed	intrn	286981	287010	.	+	.	Parent=CGI_10015447;
	scaffold934	TRF	Tandem_Repeat	286981	287010	60	+	.	.
scaffold934	subtractBed	intrn	288770	288818	.	+	.	Parent=CGI_10015447;
	scaffold934	TRF	Tandem_Repeat	288770	288818	98	+	.	.
scaffold934	subtractBed	intrn	283726	285102	.	+	.	Parent=CGI_10015447;
	scaffold934	WUBlastX	DNA_En-Spm	283726	285102	122	+	.	.
scaffold934	subtractBed	intrn	284149	286428	.	+	.	Parent=CGI_10015447;
	scaffold934	WUBlastX	DNA_En-Spm	284149	286428	1415	+	.	.
scaffold934	subtractBed	intrn	291153	291353	.	+	.	Parent=CGI_10015447;
	scaffold934	WUBlastX	DNA_Harbinger	291153	291353	76	-	.	.
scaffold934	subtractBed	intrn	344276	344330	.	+	.	Parent=CGI_10015449;
	scaffold934	TRF	Tandem_Repeat	344276	344330	110	+	.	.
scaffold934	subtractBed	intrn	372284	372312	.	-	.	Parent=CGI_10015450;
	scaffold934	TRF	Tandem_Repeat	372284	372312	58	+	.	.
scaffold934	subtractBed	intrn	391436	391482	.	+	.	Parent=CGI_10015451;
	scaffold934	TRF	Tandem_Repeat	391436	391482	57	+	.	.
scaffold934	subtractBed	intrn	404320	404427	.	+	.	Parent=CGI_10015451;
	scaffold934	TRF	Tandem_Repeat	404320	404427	69	+	.	.
scaffold934	subtractBed	intrn	407907	408797	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	407907	408797	406	+	.	.
scaffold934	subtractBed	intrn	407221	407817	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	407221	407817	118	+	.	.
scaffold934	subtractBed	intrn	407857	408132	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	407857	408132	22	+	.	.
scaffold934	subtractBed	intrn	408108	408797	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	408108	408797	415	+	.	.
scaffold934	subtractBed	intrn	408776	408925	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	408776	408925	119	+	.	.
scaffold934	subtractBed	intrn	407125	407646	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	407125	407646	232	+	.	.
scaffold934	subtractBed	intrn	407005	407682	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	407005	407682	182	+	.	.
scaffold934	subtractBed	intrn	408782	408958	.	+	.	Parent=CGI_10015451;
	scaffold934	WUBlastX	LTR_Ngaro	408782	408958	88	+	.	.
scaffold939	subtractBed	intrn	14869	15000	.	+	.	Parent=CGI_10008988;
	scaffold939	TRF	Tandem_Repeat	14869	15000	246	+	.	.
scaffold939	subtractBed	intrn	104615	104803	.	-	.	Parent=CGI_10008991;
	scaffold939	WUBlastX	LTR_DIRS	104615	104803	33	-	.	.
scaffold939	subtractBed	intrn	117502	117538	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	117502	117538	74	+	.	.
scaffold939	subtractBed	intrn	117767	117875	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	117767	117875	78	+	.	.
scaffold939	subtractBed	intrn	117772	117859	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	117772	117859	104	+	.	.
scaffold939	subtractBed	intrn	117873	117923	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	117873	117923	102	+	.	.
scaffold939	subtractBed	intrn	120818	120860	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	120818	120860	50	+	.	.
scaffold939	subtractBed	intrn	122263	122296	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	122263	122296	68	+	.	.
scaffold939	subtractBed	intrn	123069	123095	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	123069	123095	54	+	.	.
scaffold939	subtractBed	intrn	126319	126557	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	126319	126557	352	+	.	.
scaffold939	subtractBed	intrn	127874	128091	.	+	.	Parent=CGI_10008992;
	scaffold939	TRF	Tandem_Repeat	127874	128091	283	+	.	.
scaffold939	subtractBed	intrn	136604	136644	.	+	.	Parent=CGI_10008993;
	scaffold939	TRF	Tandem_Repeat	136604	136644	55	+	.	.
scaffold939	subtractBed	intrn	169142	169189	.	-	.	Parent=CGI_10008995;
	scaffold939	TRF	Tandem_Repeat	169142	169189	96	+	.	.
scaffold939	subtractBed	intrn	169252	169320	.	-	.	Parent=CGI_10008995;
	scaffold939	TRF	Tandem_Repeat	169252	169320	111	+	.	.
scaffold939	subtractBed	intrn	208652	208688	.	+	.	Parent=CGI_10008997;
	scaffold939	TRF	Tandem_Repeat	208652	208688	51	+	.	.
scaffold939	subtractBed	intrn	208652	208688	.	+	.	Parent=CGI_10008997;
	scaffold939	TRF	Tandem_Repeat	208652	208688	51	+	.	.
scaffold94	subtractBed	intrn	49343	49636	.	+	.	Parent=CGI_10013908;
	scaffold94	WUBlastX	DNA_Maverick	49343	49636	108	+	.	.
scaffold94	subtractBed	intrn	50180	50184	.	+	.	Parent=CGI_10013908;
	scaffold94	WUBlastX	DNA_Sola	50180	50302	96	+	.	.
scaffold94	subtractBed	intrn	64578	65351	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	64578	65351	57	+	.	.
scaffold94	subtractBed	intrn	64327	64476	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	64327	64476	33	+	.	.
scaffold94	subtractBed	intrn	64428	64976	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	64428	64976	28	+	.	.
scaffold94	subtractBed	intrn	64273	64476	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_ERV1	64273	64476	24	+	.	.
scaffold94	subtractBed	intrn	63482	64069	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	63482	64069	93	+	.	.
scaffold94	subtractBed	intrn	64641	65012	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	64641	65012	62	+	.	.
scaffold94	subtractBed	intrn	64722	65063	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_ERV1	64722	65063	64	+	.	.
scaffold94	subtractBed	intrn	64312	64422	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_ERVK	64312	64422	42	+	.	.
scaffold94	subtractBed	intrn	67471	68613	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy-Cigr	67471	68613	376	+	.	.
scaffold94	subtractBed	intrn	66913	68427	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	66913	68427	582	+	.	.
scaffold94	subtractBed	intrn	65754	66497	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	65754	66497	443	+	.	.
scaffold94	subtractBed	intrn	66667	66885	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy-Cigr	66667	66885	85	+	.	.
scaffold94	subtractBed	intrn	66488	66799	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	66488	66799	121	+	.	.
scaffold94	subtractBed	intrn	65751	66698	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	65751	66698	175	+	.	.
scaffold94	subtractBed	intrn	66667	66840	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	66667	66840	92	+	.	.
scaffold94	subtractBed	intrn	65550	66476	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	65550	66476	302	+	.	.
scaffold94	subtractBed	intrn	65392	65769	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	65392	65769	248	+	.	.
scaffold94	subtractBed	intrn	65314	65772	.	+	.	Parent=CGI_10013909;
	scaffold94	WUBlastX	LTR_Gypsy	65314	65772	200	+	.	.
scaffold94	subtractBed	intrn	76214	76261	.	-	.	Parent=CGI_10013911;
	scaffold94	TRF	Tandem_Repeat	76214	76261	78	+	.	.
scaffold94	subtractBed	intrn	82458	82502	.	-	.	Parent=CGI_10013911;
	scaffold94	TRF	Tandem_Repeat	82458	82502	90	+	.	.
scaffold94	subtractBed	intrn	84953	84991	.	-	.	Parent=CGI_10013911;
	scaffold94	TRF	Tandem_Repeat	84953	84991	78	+	.	.
scaffold94	subtractBed	intrn	119729	120112	.	+	.	Parent=CGI_10013913;
	scaffold94	WUBlastX	DNA_hAT-Blackja	119729	120112	58	+	.	.
scaffold94	subtractBed	intrn	118806	119738	.	+	.	Parent=CGI_10013913;
	scaffold94	WUBlastX	DNA_hAT-Blackja	118806	119738	558	+	.	.
scaffold94	subtractBed	intrn	120038	120616	.	+	.	Parent=CGI_10013913;
	scaffold94	WUBlastX	DNA_hAT-Blackja	120038	120616	178	+	.	.
scaffold94	subtractBed	intrn	120703	121077	.	+	.	Parent=CGI_10013913;
	scaffold94	WUBlastX	DNA_hAT-Blackja	120703	121077	171	+	.	.
scaffold94	subtractBed	intrn	119843	120664	.	+	.	Parent=CGI_10013913;
	scaffold94	WUBlastX	DNA_hAT-Blackja	119843	120664	168	+	.	.
scaffold94	subtractBed	intrn	130066	130445	.	+	.	Parent=CGI_10013913;
	scaffold94	TRF	Tandem_Repeat	130066	130445	362	+	.	.
scaffold94	subtractBed	intrn	146085	146122	.	-	.	Parent=CGI_10013914;
	scaffold94	TRF	Tandem_Repeat	146085	146122	60	+	.	.
scaffold94	subtractBed	intrn	241049	241207	.	+	.	Parent=CGI_10013919;
	scaffold94	WUBlastX	LINE_RTE-X	241049	241207	40	-	.	.
scaffold94	subtractBed	intrn	311912	311962	.	-	.	Parent=CGI_10013925;
	scaffold94	TRF	Tandem_Repeat	311912	311962	102	+	.	.
scaffold94	subtractBed	intrn	346930	347338	.	-	.	Parent=CGI_10013929;
	scaffold94	TRF	Tandem_Repeat	346930	347338	350	+	.	.
scaffold94	subtractBed	intrn	346930	347338	.	-	.	Parent=CGI_10013929;
	scaffold94	TRF	Tandem_Repeat	346930	347338	371	+	.	.
scaffold94	subtractBed	intrn	346930	347275	.	-	.	Parent=CGI_10013929;
	scaffold94	TRF	Tandem_Repeat	346930	347275	398	+	.	.
scaffold941	subtractBed	intrn	654	892	.	-	.	Parent=CGI_10003702;
	scaffold941	TRF	Tandem_Repeat	654	892	327	+	.	.
scaffold942	subtractBed	intrn	45998	46247	.	-	.	Parent=CGI_10019152;
	scaffold942	TRF	Tandem_Repeat	45998	46247	92	+	.	.
scaffold942	subtractBed	intrn	47158	47924	.	-	.	Parent=CGI_10019152;
	scaffold942	TRF	Tandem_Repeat	47158	47924	1028	+	.	.
scaffold942	subtractBed	intrn	114740	115303	.	+	.	Parent=CGI_10019154;
	scaffold942	WUBlastX	LINE_Penelope	114740	115303	147	+	.	.
scaffold942	subtractBed	intrn	114725	115438	.	+	.	Parent=CGI_10019154;
	scaffold942	WUBlastX	LINE_Penelope	114725	115438	140	+	.	.
scaffold942	subtractBed	intrn	124204	124674	.	+	.	Parent=CGI_10019154;
	scaffold942	WUBlastX	DNA_PiggyBac	124204	124674	196	-	.	.
scaffold942	subtractBed	intrn	124694	125830	.	+	.	Parent=CGI_10019154;
	scaffold942	WUBlastX	DNA_PiggyBac	124694	125830	562	-	.	.
scaffold942	subtractBed	intrn	127674	127707	.	+	.	Parent=CGI_10019154;
	scaffold942	TRF	Tandem_Repeat	127674	127707	50	+	.	.
scaffold942	subtractBed	intrn	177262	177314	.	+	.	Parent=CGI_10019155;
	scaffold942	TRF	Tandem_Repeat	177262	177314	106	+	.	.
scaffold942	subtractBed	intrn	265747	265908	.	-	.	Parent=CGI_10019160;
	scaffold942	TRF	Tandem_Repeat	265747	265908	192	+	.	.
scaffold942	subtractBed	intrn	293144	293213	.	+	.	Parent=CGI_10019161;
	scaffold942	TRF	Tandem_Repeat	293144	293213	54	+	.	.
scaffold942	subtractBed	intrn	303010	303218	.	+	.	Parent=CGI_10019162;
	scaffold942	TRF	Tandem_Repeat	303010	303218	201	+	.	.
scaffold942	subtractBed	intrn	306230	306295	.	+	.	Parent=CGI_10019162;
	scaffold942	TRF	Tandem_Repeat	306230	306295	132	+	.	.
scaffold942	subtractBed	intrn	341994	342062	.	-	.	Parent=CGI_10019165;
	scaffold942	TRF	Tandem_Repeat	341994	342062	138	+	.	.
scaffold942	subtractBed	intrn	344154	344199	.	-	.	Parent=CGI_10019165;
	scaffold942	TRF	Tandem_Repeat	344154	344199	92	+	.	.
scaffold942	subtractBed	intrn	344392	344736	.	-	.	Parent=CGI_10019165;
	scaffold942	WUBlastX	LTR_Pao	344392	344736	158	-	.	.
scaffold942	subtractBed	intrn	366386	366433	.	+	.	Parent=CGI_10019167;
	scaffold942	TRF	Tandem_Repeat	366386	366433	96	+	.	.
scaffold942	subtractBed	intrn	393593	393617	.	-	.	Parent=CGI_10019170;
	scaffold942	TRF	Tandem_Repeat	393593	393617	50	+	.	.
scaffold942	subtractBed	intrn	395443	395491	.	-	.	Parent=CGI_10019170;
	scaffold942	TRF	Tandem_Repeat	395443	395491	98	+	.	.
scaffold942	subtractBed	intrn	396811	397032	.	-	.	Parent=CGI_10019170;
	scaffold942	WUBlastX	DNA_TcMar-Tc1	396811	397032	117	+	.	.
scaffold942	subtractBed	intrn	396242	396808	.	-	.	Parent=CGI_10019170;
	scaffold942	WUBlastX	DNA_TcMar-Tc1	396242	396808	210	+	.	.
scaffold942	subtractBed	intrn	397029	397151	.	-	.	Parent=CGI_10019170;
	scaffold942	WUBlastX	DNA_TcMar-Tc1	397029	397151	76	+	.	.
scaffold942	subtractBed	intrn	396847	397074	.	-	.	Parent=CGI_10019170;
	scaffold942	WUBlastX	DNA_TcMar-Tc1	396847	397074	87	+	.	.
scaffold942	subtractBed	intrn	405052	405081	.	-	.	Parent=CGI_10019170;
	scaffold942	TRF	Tandem_Repeat	405052	405081	60	+	.	.
scaffold942	subtractBed	intrn	405235	405266	.	-	.	Parent=CGI_10019170;
	scaffold942	TRF	Tandem_Repeat	405235	405266	64	+	.	.
scaffold942	subtractBed	intrn	405264	405301	.	-	.	Parent=CGI_10019170;
	scaffold942	TRF	Tandem_Repeat	405264	405301	76	+	.	.
scaffold942	subtractBed	intrn	428558	428615	.	+	.	Parent=CGI_10019173;
	scaffold942	TRF	Tandem_Repeat	428558	428615	116	+	.	.
scaffold942	subtractBed	intrn	430878	430925	.	+	.	Parent=CGI_10019173;
	scaffold942	TRF	Tandem_Repeat	430878	430925	96	+	.	.
scaffold942	subtractBed	intrn	442761	443720	.	-	.	Parent=CGI_10019174;
	scaffold942	TRF	Tandem_Repeat	442761	443720	1366	+	.	.
scaffold942	subtractBed	intrn	445573	445947	.	-	.	Parent=CGI_10019174;
	scaffold942	TRF	Tandem_Repeat	445573	445947	588	+	.	.
scaffold942	subtractBed	intrn	446776	447666	.	-	.	Parent=CGI_10019174;
	scaffold942	TRF	Tandem_Repeat	446776	447666	1147	+	.	.
scaffold942	subtractBed	intrn	468785	469142	.	+	.	Parent=CGI_10019176;
	scaffold942	TRF	Tandem_Repeat	468785	469142	443	+	.	.
scaffold942	subtractBed	intrn	478959	479837	.	+	.	Parent=CGI_10019176;
	scaffold942	TRF	Tandem_Repeat	478959	479837	1244	+	.	.
scaffold942	subtractBed	intrn	480781	480927	.	+	.	Parent=CGI_10019176;
	scaffold942	TRF	Tandem_Repeat	480781	480927	73	+	.	.
scaffold942	subtractBed	intrn	480843	480972	.	+	.	Parent=CGI_10019176;
	scaffold942	TRF	Tandem_Repeat	480843	480972	93	+	.	.
scaffold942	subtractBed	intrn	485474	485498	.	+	.	Parent=CGI_10019177;
	scaffold942	TRF	Tandem_Repeat	485474	485498	50	+	.	.
scaffold944	subtractBed	intrn	53351	53421	.	+	.	Parent=CGI_10005967;
	scaffold944	TRF	Tandem_Repeat	53351	53421	135	+	.	.
scaffold948	subtractBed	intrn	182569	183028	.	-	.	Parent=CGI_10020012;
	scaffold948	TRF	Tandem_Repeat	182569	183028	694	+	.	.
scaffold948	subtractBed	intrn	208623	208659	.	-	.	Parent=CGI_10020014;
	scaffold948	TRF	Tandem_Repeat	208623	208659	74	+	.	.
scaffold948	subtractBed	intrn	234410	234559	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	234410	234559	264	+	.	.
scaffold948	subtractBed	intrn	238047	238130	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	238047	238130	150	+	.	.
scaffold948	subtractBed	intrn	256187	256608	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	256187	256608	799	+	.	.
scaffold948	subtractBed	intrn	260872	261022	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	260872	261022	92	+	.	.
scaffold948	subtractBed	intrn	260924	261069	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	260924	261069	116	+	.	.
scaffold948	subtractBed	intrn	260867	261094	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	260867	261094	370	+	.	.
scaffold948	subtractBed	intrn	268060	268111	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	268060	268111	61	+	.	.
scaffold948	subtractBed	intrn	273259	273307	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	273259	273307	89	+	.	.
scaffold948	subtractBed	intrn	275738	275774	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	275738	275774	56	+	.	.
scaffold948	subtractBed	intrn	278837	278866	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	278837	278866	60	+	.	.
scaffold948	subtractBed	intrn	285015	285042	.	+	.	Parent=CGI_10020015;
	scaffold948	TRF	Tandem_Repeat	285015	285042	56	+	.	.
scaffold948	subtractBed	intrn	321547	321587	.	-	.	Parent=CGI_10020017;
	scaffold948	TRF	Tandem_Repeat	321547	321587	82	+	.	.
scaffold948	subtractBed	intrn	371829	371859	.	-	.	Parent=CGI_10020019;
	scaffold948	TRF	Tandem_Repeat	371829	371859	62	+	.	.
scaffold948	subtractBed	intrn	380563	380614	.	-	.	Parent=CGI_10020019;
	scaffold948	TRF	Tandem_Repeat	380563	380614	95	+	.	.
scaffold948	subtractBed	intrn	380711	380770	.	-	.	Parent=CGI_10020019;
	scaffold948	TRF	Tandem_Repeat	380711	380770	97	+	.	.
scaffold948	subtractBed	intrn	406583	406634	.	-	.	Parent=CGI_10020020;
	scaffold948	TRF	Tandem_Repeat	406583	406634	77	+	.	.
scaffold948	subtractBed	intrn	415859	415920	.	-	.	Parent=CGI_10020024;
	scaffold948	TRF	Tandem_Repeat	415859	415920	124	+	.	.
scaffold948	subtractBed	intrn	428154	428180	.	-	.	Parent=CGI_10020025;
	scaffold948	TRF	Tandem_Repeat	428154	428180	54	+	.	.
scaffold948	subtractBed	intrn	428180	428242	.	-	.	Parent=CGI_10020025;
	scaffold948	TRF	Tandem_Repeat	428180	428242	126	+	.	.
scaffold948	subtractBed	intrn	483478	483559	.	-	.	Parent=CGI_10020032;
	scaffold948	TRF	Tandem_Repeat	483478	483559	85	+	.	.
scaffold948	subtractBed	intrn	484028	484163	.	-	.	Parent=CGI_10020032;
	scaffold948	TRF	Tandem_Repeat	484028	484163	156	+	.	.
scaffold948	subtractBed	intrn	484028	484163	.	-	.	Parent=CGI_10020032;
	scaffold948	TRF	Tandem_Repeat	484028	484163	184	+	.	.
scaffold948	subtractBed	intrn	616419	616566	.	+	.	Parent=CGI_10020034;
	scaffold948	TRF	Tandem_Repeat	616419	616566	156	+	.	.
scaffold950	subtractBed	intrn	46376	47466	.	+	.	Parent=CGI_10022918;
	scaffold950	TRF	Tandem_Repeat	46376	47466	883	+	.	.
scaffold950	subtractBed	intrn	48809	48854	.	+	.	Parent=CGI_10022918;
	scaffold950	WUBlastX	LINE_Rex-Babar	48809	48913	29	+	.	.
scaffold950	subtractBed	intrn	49178	49228	.	+	.	Parent=CGI_10022918;
	scaffold950	WUBlastX	LINE_CR1	49178	49303	20	+	.	.
scaffold950	subtractBed	intrn	97361	97446	.	-	.	Parent=CGI_10022920;
	scaffold950	TRF	Tandem_Repeat	97361	97446	86	+	.	.
scaffold950	subtractBed	intrn	101197	101556	.	-	.	Parent=CGI_10022920;
	scaffold950	WUBlastX	LINE_L1-Tx1	101197	101556	151	+	.	.
scaffold950	subtractBed	intrn	109560	110501	.	-	.	Parent=CGI_10022920;
	scaffold950	TRF	Tandem_Repeat	109560	110501	1275	+	.	.
scaffold950	subtractBed	intrn	107705	108073	.	-	.	Parent=CGI_10022920;
	scaffold950	WUBlastX	DNA_TcMar-Pogo	107705	108073	81	-	.	.
scaffold950	subtractBed	intrn	107609	107998	.	-	.	Parent=CGI_10022920;
	scaffold950	WUBlastX	DNA_TcMar-Tc2	107609	107998	129	-	.	.
scaffold950	subtractBed	intrn	108160	108546	.	-	.	Parent=CGI_10022920;
	scaffold950	WUBlastX	DNA_TcMar-Tc2	108160	108546	146	-	.	.
scaffold950	subtractBed	intrn	108094	108936	.	-	.	Parent=CGI_10022920;
	scaffold950	WUBlastX	DNA_TcMar-Tc2	108094	108936	139	-	.	.
scaffold950	subtractBed	intrn	121042	121109	.	+	.	Parent=CGI_10022921;
	scaffold950	WUBlastX	LTR_DIRS	120966	121109	77	-	.	.
scaffold950	subtractBed	intrn	128561	128649	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	128561	128649	63	+	.	.
scaffold950	subtractBed	intrn	130352	130448	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	130352	130448	83	+	.	.
scaffold950	subtractBed	intrn	130887	130926	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	130887	130926	53	+	.	.
scaffold950	subtractBed	intrn	137402	137434	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	137402	137434	66	+	.	.
scaffold950	subtractBed	intrn	130957	132245	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	130957	132245	1887	+	.	.
scaffold950	subtractBed	intrn	142503	142599	.	+	.	Parent=CGI_10022921;
	scaffold950	TRF	Tandem_Repeat	142503	142599	70	+	.	.
scaffold950	subtractBed	intrn	159337	159517	.	+	.	Parent=CGI_10022923;
	scaffold950	WUBlastX	DNA_TcMar-Pogo	159203	159517	30	+	.	.
scaffold950	subtractBed	intrn	236379	236447	.	-	.	Parent=CGI_10022925;
	scaffold950	TRF	Tandem_Repeat	236379	236447	79	+	.	.
scaffold950	subtractBed	intrn	235298	235408	.	-	.	Parent=CGI_10022925;
	scaffold950	WUBlastX	LINE_L2	235298	235408	43	-	.	.
scaffold950	subtractBed	intrn	235428	235466	.	-	.	Parent=CGI_10022925;
	scaffold950	WUBlastX	LINE_L2	235428	235466	29	-	.	.
scaffold950	subtractBed	intrn	235428	235499	.	-	.	Parent=CGI_10022925;
	scaffold950	WUBlastX	LINE_L2	235428	235499	22	-	.	.
scaffold950	subtractBed	intrn	235216	235308	.	-	.	Parent=CGI_10022925;
	scaffold950	WUBlastX	LINE_L2	235216	235308	39	-	.	.
scaffold950	subtractBed	intrn	243558	243620	.	-	.	Parent=CGI_10022925;
	scaffold950	TRF	Tandem_Repeat	243558	243620	126	+	.	.
scaffold950	subtractBed	intrn	243751	243822	.	-	.	Parent=CGI_10022925;
	scaffold950	TRF	Tandem_Repeat	243751	243822	144	+	.	.
scaffold950	subtractBed	intrn	355981	356041	.	-	.	Parent=CGI_10022928;
	scaffold950	TRF	Tandem_Repeat	355981	356041	122	+	.	.
scaffold950	subtractBed	intrn	350868	351098	.	-	.	Parent=CGI_10022928;
	scaffold950	WUBlastX	DNA_TcMar-Tc1	350868	351098	92	-	.	.
scaffold950	subtractBed	intrn	350700	351071	.	-	.	Parent=CGI_10022928;
	scaffold950	WUBlastX	DNA_TcMar-Tc1	350700	351071	23	-	.	.
scaffold950	subtractBed	intrn	350395	350673	.	-	.	Parent=CGI_10022928;
	scaffold950	WUBlastX	DNA_TcMar-Tc1	350395	350673	73	-	.	.
scaffold950	subtractBed	intrn	361021	361063	.	-	.	Parent=CGI_10022928;
	scaffold950	TRF	Tandem_Repeat	361021	361063	52	+	.	.
scaffold950	subtractBed	intrn	390733	391149	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	390733	391149	196	-	.	.
scaffold950	subtractBed	intrn	390700	391374	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	390700	391374	126	-	.	.
scaffold950	subtractBed	intrn	390658	391149	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	390658	391149	189	-	.	.
scaffold950	subtractBed	intrn	390058	391149	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	390058	391149	141	-	.	.
scaffold950	subtractBed	intrn	390733	391242	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	390733	391242	150	-	.	.
scaffold950	subtractBed	intrn	391315	391680	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LINE_L2	391315	391680	84	-	.	.
scaffold950	subtractBed	intrn	397123	397221	.	+	.	Parent=CGI_10022929;
	scaffold950	WUBlastX	LTR_DIRS	397123	397221	63	-	.	.
scaffold950	subtractBed	intrn	720320	720371	.	-	.	Parent=CGI_10022935;
	scaffold950	TRF	Tandem_Repeat	720320	720371	104	+	.	.
scaffold951	subtractBed	intrn	10809	10851	.	+	.	Parent=CGI_10009145;
	scaffold951	TRF	Tandem_Repeat	10809	10851	86	+	.	.
scaffold951	subtractBed	intrn	27963	28138	.	+	.	Parent=CGI_10009146;
	scaffold951	TRF	Tandem_Repeat	27963	28138	115	+	.	.
scaffold951	subtractBed	intrn	27693	28333	.	+	.	Parent=CGI_10009146;
	scaffold951	TRF	Tandem_Repeat	27693	28333	370	+	.	.
scaffold951	subtractBed	intrn	34774	35240	.	+	.	Parent=CGI_10009146;
	scaffold951	TRF	Tandem_Repeat	34774	35240	393	+	.	.
scaffold951	subtractBed	intrn	46139	46182	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	46139	46182	88	+	.	.
scaffold951	subtractBed	intrn	53845	54017	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	53845	54040	266	+	.	.
scaffold951	subtractBed	intrn	61731	62128	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	61731	62128	582	+	.	.
scaffold951	subtractBed	intrn	63472	63522	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	63472	63522	93	+	.	.
scaffold951	subtractBed	intrn	75044	76741	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	75044	76741	942	+	.	.
scaffold951	subtractBed	intrn	75086	76690	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	75086	76690	601	+	.	.
scaffold951	subtractBed	intrn	75679	76674	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	75679	76674	823	+	.	.
scaffold951	subtractBed	intrn	100816	100871	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	100816	100871	112	+	.	.
scaffold951	subtractBed	intrn	101586	101660	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	101586	101660	150	+	.	.
scaffold951	subtractBed	intrn	104859	104903	.	-	.	Parent=CGI_10009148;
	scaffold951	TRF	Tandem_Repeat	104859	104903	90	+	.	.
scaffold951	subtractBed	intrn	139591	139656	.	-	.	Parent=CGI_10009150;
	scaffold951	TRF	Tandem_Repeat	139591	139656	132	+	.	.
scaffold951	subtractBed	intrn	152267	152412	.	+	.	Parent=CGI_10009152;
	scaffold951	TRF	Tandem_Repeat	152267	152412	82	+	.	.
scaffold951	subtractBed	intrn	152291	152557	.	+	.	Parent=CGI_10009152;
	scaffold951	TRF	Tandem_Repeat	152291	152557	179	+	.	.
scaffold951	subtractBed	intrn	174637	175239	.	+	.	Parent=CGI_10009156;
	scaffold951	TRF	Tandem_Repeat	174637	175239	954	+	.	.
scaffold951	subtractBed	intrn	183603	183647	.	+	.	Parent=CGI_10009157;
	scaffold951	TRF	Tandem_Repeat	183603	183647	90	+	.	.
scaffold951	subtractBed	intrn	213738	213763	.	-	.	Parent=CGI_10009159;
	scaffold951	TRF	Tandem_Repeat	213738	213763	52	+	.	.
scaffold952	subtractBed	intrn	17102	17869	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	DNA_TcMar-Tc1	17102	17869	273	-	.	.
scaffold952	subtractBed	intrn	25021	25602	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	25021	25602	42	+	.	.
scaffold952	subtractBed	intrn	23292	23495	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1	23292	23495	58	+	.	.
scaffold952	subtractBed	intrn	23165	23206	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	23165	23206	22	+	.	.
scaffold952	subtractBed	intrn	23497	23778	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	23497	23778	61	+	.	.
scaffold952	subtractBed	intrn	23431	23994	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	23431	23994	51	+	.	.
scaffold952	subtractBed	intrn	25090	25434	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	25090	25434	55	+	.	.
scaffold952	subtractBed	intrn	23196	23495	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1	23196	23495	31	+	.	.
scaffold952	subtractBed	intrn	25021	25437	.	+	.	Parent=CGI_10002898;
	scaffold952	WUBlastX	LINE_L1-Tx1	25021	25437	52	+	.	.
scaffold954	subtractBed	intrn	15051	15718	.	+	.	Parent=CGI_10010733;
	scaffold954	TRF	Tandem_Repeat	15051	15718	910	+	.	.
scaffold954	subtractBed	intrn	32187	32369	.	+	.	Parent=CGI_10010738;
	scaffold954	TRF	Tandem_Repeat	32187	32369	252	+	.	.
scaffold954	subtractBed	intrn	50341	50428	.	-	.	Parent=CGI_10010739;
	scaffold954	TRF	Tandem_Repeat	50341	50428	151	+	.	.
scaffold954	subtractBed	intrn	69458	69664	.	-	.	Parent=CGI_10010740;
	scaffold954	TRF	Tandem_Repeat	69458	69664	333	+	.	.
scaffold954	subtractBed	intrn	99017	99064	.	+	.	Parent=CGI_10010743;
	scaffold954	TRF	Tandem_Repeat	99017	99064	96	+	.	.
scaffold954	subtractBed	intrn	226174	226278	.	-	.	Parent=CGI_10010745;
	scaffold954	TRF	Tandem_Repeat	226174	226278	66	+	.	.
scaffold954	subtractBed	intrn	226194	226297	.	-	.	Parent=CGI_10010745;
	scaffold954	TRF	Tandem_Repeat	226194	226297	100	+	.	.
scaffold954	subtractBed	intrn	221074	221437	.	-	.	Parent=CGI_10010745;
	scaffold954	WUBlastX	LINE_RTE-X	221072	221437	38	-	.	.
scaffold954	subtractBed	intrn	221074	221177	.	-	.	Parent=CGI_10010745;
	scaffold954	WUBlastX	LINE_I	221010	221177	28	-	.	.
scaffold954	subtractBed	intrn	221374	221484	.	-	.	Parent=CGI_10010745;
	scaffold954	WUBlastX	LINE_RTE-X	221374	221484	20	-	.	.
scaffold955	subtractBed	intrn	16096	16137	.	+	.	Parent=CGI_10009845;
	scaffold955	TRF	Tandem_Repeat	16096	16137	84	+	.	.
scaffold955	subtractBed	intrn	59757	59798	.	-	.	Parent=CGI_10009848;
	scaffold955	TRF	Tandem_Repeat	59757	59798	52	+	.	.
scaffold955	subtractBed	intrn	85612	85666	.	+	.	Parent=CGI_10009852;
	scaffold955	TRF	Tandem_Repeat	85612	85666	110	+	.	.
scaffold955	subtractBed	intrn	85794	85837	.	+	.	Parent=CGI_10009852;
	scaffold955	TRF	Tandem_Repeat	85794	85837	88	+	.	.
scaffold955	subtractBed	intrn	87777	88378	.	+	.	Parent=CGI_10009852;
	scaffold955	TRF	Tandem_Repeat	87777	88378	945	+	.	.
scaffold955	subtractBed	intrn	107387	107387	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	DNA_Maverick	107387	107698	37	+	.	.
scaffold955	subtractBed	intrn	109410	109661	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	109410	109661	233	+	.	.
scaffold955	subtractBed	intrn	109410	109683	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	109410	109683	230	+	.	.
scaffold955	subtractBed	intrn	110342	110545	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	110342	110545	196	+	.	.
scaffold955	subtractBed	intrn	110328	110609	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	110328	110609	361	+	.	.
scaffold955	subtractBed	intrn	110401	110610	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	110401	110610	226	+	.	.
scaffold955	subtractBed	intrn	111562	111602	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	111562	111602	82	+	.	.
scaffold955	subtractBed	intrn	112534	112583	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	112534	112583	100	+	.	.
scaffold955	subtractBed	intrn	121695	121865	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	121695	121865	87	+	.	.
scaffold955	subtractBed	intrn	121865	121960	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	121865	121960	77	+	.	.
scaffold955	subtractBed	intrn	121900	121990	.	+	.	Parent=CGI_10009853;
	scaffold955	TRF	Tandem_Repeat	121900	121990	65	+	.	.
scaffold955	subtractBed	intrn	119290	119475	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	119290	119475	48	-	.	.
scaffold955	subtractBed	intrn	120026	120406	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	120026	120406	68	-	.	.
scaffold955	subtractBed	intrn	119552	119665	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	119552	119665	37	-	.	.
scaffold955	subtractBed	intrn	120029	120307	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	120029	120307	81	-	.	.
scaffold955	subtractBed	intrn	118510	118665	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	118510	118665	28	-	.	.
scaffold955	subtractBed	intrn	119682	119981	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	119682	119981	29	-	.	.
scaffold955	subtractBed	intrn	118543	118683	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	118543	118683	45	-	.	.
scaffold955	subtractBed	intrn	119033	119596	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	119033	119596	47	-	.	.
scaffold955	subtractBed	intrn	120020	120190	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	120020	120190	89	-	.	.
scaffold955	subtractBed	intrn	119975	120220	.	+	.	Parent=CGI_10009853;
	scaffold955	WUBlastX	LINE_RTE-BovB	119975	120220	30	-	.	.
scaffold955	subtractBed	intrn	141136	141187	.	+	.	Parent=CGI_10009854;
	scaffold955	TRF	Tandem_Repeat	141136	141187	97	+	.	.
scaffold955	subtractBed	intrn	163661	163685	.	-	.	Parent=CGI_10009855;
	scaffold955	TRF	Tandem_Repeat	163661	163685	50	+	.	.
scaffold955	subtractBed	intrn	173789	173836	.	+	.	Parent=CGI_10009856;
	scaffold955	TRF	Tandem_Repeat	173789	173836	96	+	.	.
scaffold955	subtractBed	intrn	209124	209160	.	+	.	Parent=CGI_10009859;
	scaffold955	TRF	Tandem_Repeat	209124	209160	74	+	.	.
scaffold955	subtractBed	intrn	237622	237661	.	-	.	Parent=CGI_10009860;
	scaffold955	TRF	Tandem_Repeat	237622	237661	80	+	.	.
scaffold955	subtractBed	intrn	238772	238958	.	-	.	Parent=CGI_10009860;
	scaffold955	TRF	Tandem_Repeat	238772	238958	213	+	.	.
scaffold955	subtractBed	intrn	243904	244103	.	+	.	Parent=CGI_10009861;
	scaffold955	TRF	Tandem_Repeat	243904	244103	167	+	.	.
scaffold960	subtractBed	intrn	64717	64769	.	-	.	Parent=CGI_10013406;
	scaffold960	TRF	Tandem_Repeat	64717	64769	61	+	.	.
scaffold960	subtractBed	intrn	218131	219197	.	+	.	Parent=CGI_10013412;
	scaffold960	TRF	Tandem_Repeat	218131	219197	1532	+	.	.
scaffold960	subtractBed	intrn	218131	219197	.	+	.	Parent=CGI_10013412;
	scaffold960	TRF	Tandem_Repeat	218131	219197	1604	+	.	.
scaffold960	subtractBed	intrn	311765	311905	.	+	.	Parent=CGI_10013413;
	scaffold960	TRF	Tandem_Repeat	311765	311905	257	+	.	.
scaffold960	subtractBed	intrn	348617	348667	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	348617	348667	75	+	.	.
scaffold960	subtractBed	intrn	348617	348687	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	348617	348687	88	+	.	.
scaffold960	subtractBed	intrn	348645	348692	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	348645	348692	78	+	.	.
scaffold960	subtractBed	intrn	348621	348692	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	348621	348692	81	+	.	.
scaffold960	subtractBed	intrn	349187	349246	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	349187	349246	75	+	.	.
scaffold960	subtractBed	intrn	349187	349246	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	349187	349246	93	+	.	.
scaffold960	subtractBed	intrn	350934	350983	.	+	.	Parent=CGI_10013415;
	scaffold960	TRF	Tandem_Repeat	350934	350983	82	+	.	.
scaffold962	subtractBed	intrn	156445	156512	.	-	.	Parent=CGI_10027635;
	scaffold962	TRF	Tandem_Repeat	156445	156512	118	+	.	.
scaffold962	subtractBed	intrn	157174	157207	.	-	.	Parent=CGI_10027635;
	scaffold962	TRF	Tandem_Repeat	157174	157207	50	+	.	.
scaffold962	subtractBed	intrn	227716	227771	.	-	.	Parent=CGI_10027639;
	scaffold962	TRF	Tandem_Repeat	227716	227771	112	+	.	.
scaffold962	subtractBed	intrn	262992	263419	.	-	.	Parent=CGI_10027640;
	scaffold962	TRF	Tandem_Repeat	262992	263419	359	+	.	.
scaffold962	subtractBed	intrn	262992	263362	.	-	.	Parent=CGI_10027640;
	scaffold962	TRF	Tandem_Repeat	262992	263362	478	+	.	.
scaffold962	subtractBed	intrn	262992	263362	.	-	.	Parent=CGI_10027640;
	scaffold962	TRF	Tandem_Repeat	262992	263362	478	+	.	.
scaffold962	subtractBed	intrn	271952	272043	.	-	.	Parent=CGI_10027640;
	scaffold962	TRF	Tandem_Repeat	271952	272043	157	+	.	.
scaffold962	subtractBed	intrn	293743	293792	.	+	.	Parent=CGI_10027641;
	scaffold962	TRF	Tandem_Repeat	293743	293792	91	+	.	.
scaffold962	subtractBed	intrn	328665	330349	.	-	.	Parent=CGI_10027642;
	scaffold962	TRF	Tandem_Repeat	328665	330349	2138	+	.	.
scaffold962	subtractBed	intrn	335509	335684	.	-	.	Parent=CGI_10027642;
	scaffold962	TRF	Tandem_Repeat	335509	335684	145	+	.	.
scaffold962	subtractBed	intrn	366438	366740	.	-	.	Parent=CGI_10027644;
	scaffold962	WUBlastX	DNA_NOF	366438	366740	45	-	.	.
scaffold962	subtractBed	intrn	371411	371472	.	-	.	Parent=CGI_10027644;
	scaffold962	TRF	Tandem_Repeat	371411	371472	124	+	.	.
scaffold962	subtractBed	intrn	372563	372608	.	-	.	Parent=CGI_10027644;
	scaffold962	TRF	Tandem_Repeat	372563	372608	92	+	.	.
scaffold962	subtractBed	intrn	454256	454294	.	+	.	Parent=CGI_10027649;
	scaffold962	TRF	Tandem_Repeat	454256	454294	78	+	.	.
scaffold962	subtractBed	intrn	456241	456374	.	+	.	Parent=CGI_10027649;
	scaffold962	TRF	Tandem_Repeat	456241	456374	153	+	.	.
scaffold962	subtractBed	intrn	458496	458588	.	+	.	Parent=CGI_10027649;
	scaffold962	TRF	Tandem_Repeat	458496	458588	82	+	.	.
scaffold962	subtractBed	intrn	472579	472616	.	+	.	Parent=CGI_10027650;
	scaffold962	TRF	Tandem_Repeat	472579	472616	67	+	.	.
scaffold962	subtractBed	intrn	472821	473743	.	+	.	Parent=CGI_10027650;
	scaffold962	TRF	Tandem_Repeat	472821	473743	1429	+	.	.
scaffold962	subtractBed	intrn	484686	484727	.	-	.	Parent=CGI_10027652;
	scaffold962	TRF	Tandem_Repeat	484686	484727	50	+	.	.
scaffold962	subtractBed	intrn	486843	486899	.	-	.	Parent=CGI_10027652;
	scaffold962	TRF	Tandem_Repeat	486843	486899	114	+	.	.
scaffold962	subtractBed	intrn	486899	486952	.	-	.	Parent=CGI_10027652;
	scaffold962	TRF	Tandem_Repeat	486899	486952	90	+	.	.
scaffold962	subtractBed	intrn	494392	494509	.	-	.	Parent=CGI_10027653;
	scaffold962	TRF	Tandem_Repeat	494392	494509	227	+	.	.
scaffold962	subtractBed	intrn	512867	512901	.	+	.	Parent=CGI_10027655;
	scaffold962	TRF	Tandem_Repeat	512867	512901	52	+	.	.
scaffold962	subtractBed	intrn	607468	607653	.	-	.	Parent=CGI_10027657;
	scaffold962	TRF	Tandem_Repeat	607468	607653	205	+	.	.
scaffold962	subtractBed	intrn	647582	647629	.	+	.	Parent=CGI_10027660;
	scaffold962	TRF	Tandem_Repeat	647582	647629	87	+	.	.
scaffold962	subtractBed	intrn	659770	659825	.	+	.	Parent=CGI_10027660;
	scaffold962	TRF	Tandem_Repeat	659770	659825	112	+	.	.
scaffold962	subtractBed	intrn	679161	679219	.	+	.	Parent=CGI_10027660;
	scaffold962	TRF	Tandem_Repeat	679161	679219	109	+	.	.
scaffold962	subtractBed	intrn	712027	712056	.	-	.	Parent=CGI_10027662;
	scaffold962	TRF	Tandem_Repeat	712027	712056	60	+	.	.
scaffold962	subtractBed	intrn	748152	748316	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_CR1-L2	748152	748316	24	+	.	.
scaffold962	subtractBed	intrn	747198	747368	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_L2	747198	747368	113	+	.	.
scaffold962	subtractBed	intrn	747492	747641	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_L2	747492	747641	75	+	.	.
scaffold962	subtractBed	intrn	747581	748102	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_CR1-L2	747581	748102	51	+	.	.
scaffold962	subtractBed	intrn	747680	747811	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_CR1	747680	747811	78	+	.	.
scaffold962	subtractBed	intrn	747081	747368	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_CR1-L2	747081	747368	64	+	.	.
scaffold962	subtractBed	intrn	747331	747498	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_L2	747331	747498	56	+	.	.
scaffold962	subtractBed	intrn	747656	747811	.	-	.	Parent=CGI_10027664;
	scaffold962	WUBlastX	LINE_CR1-L2	747656	747811	55	+	.	.
scaffold962	subtractBed	intrn	801599	803212	.	-	.	Parent=CGI_10027665;
	scaffold962	WUBlastX	DNA_TcMar-Fot1	801599	803212	578	+	.	.
scaffold962	subtractBed	intrn	807046	807128	.	-	.	Parent=CGI_10027665;
	scaffold962	TRF	Tandem_Repeat	807046	807128	112	+	.	.
scaffold962	subtractBed	intrn	900155	900385	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1	900155	900385	44	-	.	.
scaffold962	subtractBed	intrn	898151	899161	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_RTE-BovB	898151	899161	141	-	.	.
scaffold962	subtractBed	intrn	900263	900409	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1-Tx1	900263	900409	87	-	.	.
scaffold962	subtractBed	intrn	900546	900875	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1-Tx1	900546	900875	99	-	.	.
scaffold962	subtractBed	intrn	900959	901105	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1-Tx1	900959	901105	29	-	.	.
scaffold962	subtractBed	intrn	898522	898845	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_RTE-BovB	898522	898845	151	-	.	.
scaffold962	subtractBed	intrn	900263	900526	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1	900263	900526	63	-	.	.
scaffold962	subtractBed	intrn	901323	901409	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1	901323	901409	40	-	.	.
scaffold962	subtractBed	intrn	900908	901330	.	+	.	Parent=CGI_10027670;
	scaffold962	WUBlastX	LINE_L1-Tx1	900908	901330	25	-	.	.
scaffold962	subtractBed	intrn	903631	903923	.	+	.	Parent=CGI_10027670;
	scaffold962	TRF	Tandem_Repeat	903631	903923	320	+	.	.
scaffold962	subtractBed	intrn	903664	903926	.	+	.	Parent=CGI_10027670;
	scaffold962	TRF	Tandem_Repeat	903664	903926	368	+	.	.
scaffold962	subtractBed	intrn	905066	905409	.	+	.	Parent=CGI_10027670;
	scaffold962	TRF	Tandem_Repeat	905066	905409	200	+	.	.
scaffold962	subtractBed	intrn	905094	905369	.	+	.	Parent=CGI_10027670;
	scaffold962	TRF	Tandem_Repeat	905094	905369	229	+	.	.
scaffold962	subtractBed	intrn	905094	905409	.	+	.	Parent=CGI_10027670;
	scaffold962	TRF	Tandem_Repeat	905094	905409	235	+	.	.
scaffold962	subtractBed	intrn	932529	932835	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	932529	932835	219	+	.	.
scaffold962	subtractBed	intrn	932529	932798	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	932529	932798	222	+	.	.
scaffold962	subtractBed	intrn	934154	934178	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	934154	934178	50	+	.	.
scaffold962	subtractBed	intrn	936648	936791	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	936648	936791	160	+	.	.
scaffold962	subtractBed	intrn	938433	938621	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	938433	938621	288	+	.	.
scaffold962	subtractBed	intrn	938427	938643	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	938427	938643	150	+	.	.
scaffold962	subtractBed	intrn	938965	939052	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	938965	939052	149	+	.	.
scaffold962	subtractBed	intrn	940627	941087	.	+	.	Parent=CGI_10027672;
	scaffold962	TRF	Tandem_Repeat	940627	941087	408	+	.	.
scaffold962	subtractBed	intrn	951340	951365	.	-	.	Parent=CGI_10027673;
	scaffold962	TRF	Tandem_Repeat	951340	951365	52	+	.	.
scaffold962	subtractBed	intrn	955916	955941	.	-	.	Parent=CGI_10027673;
	scaffold962	TRF	Tandem_Repeat	955916	955941	52	+	.	.
scaffold962	subtractBed	intrn	975188	975367	.	-	.	Parent=CGI_10027674;
	scaffold962	WUBlastX	LINE_RTE-X	975188	975367	102	+	.	.
scaffold962	subtractBed	intrn	975104	975370	.	-	.	Parent=CGI_10027674;
	scaffold962	WUBlastX	LINE_RTE-X	975104	975370	102	+	.	.
scaffold962	subtractBed	intrn	1001376	1002195	.	-	.	Parent=CGI_10027676;
	scaffold962	TRF	Tandem_Repeat	1001376	1002195	867	+	.	.
scaffold962	subtractBed	intrn	1026132	1026254	.	+	.	Parent=CGI_10027679;
	scaffold962	TRF	Tandem_Repeat	1026132	1026254	151	+	.	.
scaffold962	subtractBed	intrn	1030551	1030656	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1030551	1030656	158	+	.	.
scaffold962	subtractBed	intrn	1031173	1031389	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031173	1031389	257	+	.	.
scaffold962	subtractBed	intrn	1031171	1031439	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031171	1031439	254	+	.	.
scaffold962	subtractBed	intrn	1031863	1032191	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031863	1032191	176	+	.	.
scaffold962	subtractBed	intrn	1031863	1032236	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031863	1032236	287	+	.	.
scaffold962	subtractBed	intrn	1031907	1032236	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031907	1032236	207	+	.	.
scaffold962	subtractBed	intrn	1031914	1032236	.	-	.	Parent=CGI_10027680;
	scaffold962	TRF	Tandem_Repeat	1031914	1032236	171	+	.	.
scaffold962	subtractBed	intrn	1050503	1050732	.	-	.	Parent=CGI_10027681;
	scaffold962	TRF	Tandem_Repeat	1050503	1050737	416	+	.	.
scaffold962	subtractBed	intrn	1062008	1062103	.	-	.	Parent=CGI_10027681;
	scaffold962	TRF	Tandem_Repeat	1062008	1062103	192	+	.	.
scaffold962	subtractBed	intrn	1066641	1066875	.	-	.	Parent=CGI_10027681;
	scaffold962	TRF	Tandem_Repeat	1066641	1066875	201	+	.	.
scaffold962	subtractBed	intrn	1066641	1067034	.	-	.	Parent=CGI_10027681;
	scaffold962	TRF	Tandem_Repeat	1066641	1067034	192	+	.	.
scaffold962	subtractBed	intrn	1086555	1087031	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_RTE-X	1086555	1087031	132	-	.	.
scaffold962	subtractBed	intrn	1086423	1087097	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_RTE-X	1086423	1087097	96	-	.	.
scaffold962	subtractBed	intrn	1088080	1088187	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_CR1-L2	1088080	1088187	57	+	.	.
scaffold962	subtractBed	intrn	1087725	1087898	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_CR1-L2	1087725	1087898	97	+	.	.
scaffold962	subtractBed	intrn	1087901	1088092	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_CR1-L2	1087901	1088092	63	+	.	.
scaffold962	subtractBed	intrn	1087554	1087898	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_L2	1087554	1087898	64	+	.	.
scaffold962	subtractBed	intrn	1087892	1088062	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_L2	1087892	1088062	82	+	.	.
scaffold962	subtractBed	intrn	1086495	1086956	.	-	.	Parent=CGI_10027683;
	scaffold962	WUBlastX	LINE_RTE-X	1086495	1086956	135	-	.	.
scaffold962	subtractBed	intrn	1092454	1092503	.	+	.	Parent=CGI_10027684;
	scaffold962	TRF	Tandem_Repeat	1092454	1092503	75	+	.	.
scaffold962	subtractBed	intrn	1093052	1095373	.	+	.	Parent=CGI_10027684;
	scaffold962	WUBlastX	LINE_L1-Tx1	1093052	1095373	978	+	.	.
scaffold962	subtractBed	intrn	1101802	1102646	.	-	.	Parent=CGI_10027685;
	scaffold962	TRF	Tandem_Repeat	1101802	1102646	1026	+	.	.
scaffold962	subtractBed	intrn	1105742	1105770	.	-	.	Parent=CGI_10027685;
	scaffold962	TRF	Tandem_Repeat	1105742	1105770	58	+	.	.
scaffold962	subtractBed	intrn	1134029	1134078	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1134029	1134078	75	+	.	.
scaffold962	subtractBed	intrn	1145267	1145295	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1145267	1145295	58	+	.	.
scaffold962	subtractBed	intrn	1161313	1162598	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1161313	1162598	1849	+	.	.
scaffold962	subtractBed	intrn	1162622	1162679	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1162622	1162679	62	+	.	.
scaffold962	subtractBed	intrn	1162625	1162687	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1162625	1162687	90	+	.	.
scaffold962	subtractBed	intrn	1162622	1162687	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1162622	1162687	114	+	.	.
scaffold962	subtractBed	intrn	1162629	1162688	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1162629	1162688	66	+	.	.
scaffold962	subtractBed	intrn	1164381	1164455	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1164381	1164455	143	+	.	.
scaffold962	subtractBed	intrn	1172825	1173417	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1172825	1173417	942	+	.	.
scaffold962	subtractBed	intrn	1188262	1188296	.	-	.	Parent=CGI_10027687;
	scaffold962	TRF	Tandem_Repeat	1188262	1188296	70	+	.	.
scaffold962	subtractBed	intrn	1249023	1249098	.	-	.	Parent=CGI_10027692;
	scaffold962	TRF	Tandem_Repeat	1249023	1249098	152	+	.	.
scaffold962	subtractBed	intrn	1404791	1404826	.	-	.	Parent=CGI_10027697;
	scaffold962	TRF	Tandem_Repeat	1404791	1404826	63	+	.	.
scaffold962	subtractBed	intrn	1408772	1408838	.	-	.	Parent=CGI_10027697;
	scaffold962	TRF	Tandem_Repeat	1408772	1408838	125	+	.	.
scaffold962	subtractBed	intrn	1450885	1451232	.	-	.	Parent=CGI_10027698;
	scaffold962	TRF	Tandem_Repeat	1450885	1451232	479	+	.	.
scaffold962	subtractBed	intrn	1451552	1451582	.	-	.	Parent=CGI_10027698;
	scaffold962	TRF	Tandem_Repeat	1451552	1451582	62	+	.	.
scaffold962	subtractBed	intrn	1452804	1452841	.	-	.	Parent=CGI_10027698;
	scaffold962	TRF	Tandem_Repeat	1452804	1452841	67	+	.	.
scaffold962	subtractBed	intrn	1452890	1452924	.	-	.	Parent=CGI_10027698;
	scaffold962	TRF	Tandem_Repeat	1452890	1452924	70	+	.	.
scaffold963	subtractBed	intrn	64337	64382	.	-	.	Parent=CGI_10015615;
	scaffold963	TRF	Tandem_Repeat	64337	64382	92	+	.	.
scaffold963	subtractBed	intrn	63283	63657	.	-	.	Parent=CGI_10015615;
	scaffold963	WUBlastX	LINE_RTE-X	63283	63657	21	-	.	.
scaffold963	subtractBed	intrn	63448	63657	.	-	.	Parent=CGI_10015615;
	scaffold963	WUBlastX	LINE_RTE-X	63448	63657	100	-	.	.
scaffold963	subtractBed	intrn	63343	63657	.	-	.	Parent=CGI_10015615;
	scaffold963	WUBlastX	LINE_RTE-X	63343	63657	85	-	.	.
scaffold963	subtractBed	intrn	101409	101735	.	+	.	Parent=CGI_10015619;
	scaffold963	WUBlastX	LINE_RTE-BovB	101409	101735	79	-	.	.
scaffold963	subtractBed	intrn	244703	246042	.	+	.	Parent=CGI_10015623;
	scaffold963	TRF	Tandem_Repeat	244703	246042	1280	+	.	.
scaffold964	subtractBed	intrn	37395	37574	.	+	.	Parent=CGI_10009727;
	scaffold964	WUBlastX	LINE_L1-Tx1	37395	37574	33	+	.	.
scaffold964	subtractBed	intrn	71048	71078	.	+	.	Parent=CGI_10009730;
	scaffold964	TRF	Tandem_Repeat	71048	71078	62	+	.	.
scaffold964	subtractBed	intrn	70997	71005	.	+	.	Parent=CGI_10009730;
	scaffold964	WUBlastX	LTR_Gypsy	70820	71005	24	+	.	.
scaffold964	subtractBed	intrn	101257	101308	.	-	.	Parent=CGI_10009732;
	scaffold964	TRF	Tandem_Repeat	101257	101308	86	+	.	.
scaffold964	subtractBed	intrn	103121	103985	.	-	.	Parent=CGI_10009732;
	scaffold964	TRF	Tandem_Repeat	103121	103985	1317	+	.	.
scaffold964	subtractBed	intrn	113645	114570	.	-	.	Parent=CGI_10009732;
	scaffold964	TRF	Tandem_Repeat	113645	114570	1220	+	.	.
scaffold964	subtractBed	intrn	129408	129453	.	-	.	Parent=CGI_10009732;
	scaffold964	TRF	Tandem_Repeat	129408	129453	92	+	.	.
scaffold964	subtractBed	intrn	219386	219476	.	-	.	Parent=CGI_10009735;
	scaffold964	TRF	Tandem_Repeat	219386	219476	85	+	.	.
scaffold964	subtractBed	intrn	222208	222624	.	-	.	Parent=CGI_10009735;
	scaffold964	TRF	Tandem_Repeat	222208	222624	493	+	.	.
scaffold964	subtractBed	intrn	226425	226522	.	-	.	Parent=CGI_10009735;
	scaffold964	TRF	Tandem_Repeat	226425	226522	72	+	.	.
scaffold964	subtractBed	intrn	224047	224289	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	224047	224289	169	+	.	.
scaffold964	subtractBed	intrn	224293	224508	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	224293	224508	125	+	.	.
scaffold964	subtractBed	intrn	225294	225770	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	225294	225770	121	+	.	.
scaffold964	subtractBed	intrn	223368	223991	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	223368	223991	185	+	.	.
scaffold964	subtractBed	intrn	224436	225287	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	224436	225287	386	+	.	.
scaffold964	subtractBed	intrn	225423	225890	.	-	.	Parent=CGI_10009735;
	scaffold964	WUBlastX	LTR_Ngaro	225423	225890	157	+	.	.
scaffold967	subtractBed	intrn	129714	129893	.	+	.	Parent=CGI_10015454;
	scaffold967	WUBlastX	LTR_ERV1	129714	129893	24	-	.	.
scaffold967	subtractBed	intrn	129906	130013	.	+	.	Parent=CGI_10015454;
	scaffold967	WUBlastX	LTR_Copia	129906	130013	32	-	.	.
scaffold967	subtractBed	intrn	212961	213006	.	+	.	Parent=CGI_10015461;
	scaffold967	TRF	Tandem_Repeat	212961	213006	92	+	.	.
scaffold967	subtractBed	intrn	217604	217653	.	+	.	Parent=CGI_10015461;
	scaffold967	TRF	Tandem_Repeat	217604	217653	100	+	.	.
scaffold967	subtractBed	intrn	229727	229754	.	+	.	Parent=CGI_10015461;
	scaffold967	TRF	Tandem_Repeat	229727	229754	56	+	.	.
scaffold967	subtractBed	intrn	229830	229863	.	+	.	Parent=CGI_10015461;
	scaffold967	TRF	Tandem_Repeat	229830	229863	68	+	.	.
scaffold967	subtractBed	intrn	231495	231710	.	+	.	Parent=CGI_10015461;
	scaffold967	WUBlastX	DNA_hAT-Tip100	231495	231710	116	+	.	.
scaffold967	subtractBed	intrn	231444	231710	.	+	.	Parent=CGI_10015461;
	scaffold967	WUBlastX	DNA_hAT-Tip100	231444	231710	80	+	.	.
scaffold967	subtractBed	intrn	331838	332017	.	+	.	Parent=CGI_10015463;
	scaffold967	WUBlastX	LINE_RTE-X	331838	332017	75	+	.	.
scaffold967	subtractBed	intrn	331778	332032	.	+	.	Parent=CGI_10015463;
	scaffold967	WUBlastX	LINE_RTE-X	331778	332032	28	+	.	.
scaffold967	subtractBed	intrn	340162	340207	.	+	.	Parent=CGI_10015465;
	scaffold967	TRF	Tandem_Repeat	340162	340207	92	+	.	.
scaffold967	subtractBed	intrn	349633	349756	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	349633	349756	76	+	.	.
scaffold967	subtractBed	intrn	349708	349812	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	349708	349812	63	+	.	.
scaffold967	subtractBed	intrn	349640	349830	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	349640	349830	154	+	.	.
scaffold967	subtractBed	intrn	350444	350537	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	350444	350537	125	+	.	.
scaffold967	subtractBed	intrn	350584	350672	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	350584	350672	137	+	.	.
scaffold967	subtractBed	intrn	352207	352254	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	352207	352254	78	+	.	.
scaffold967	subtractBed	intrn	355631	355786	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	355631	355786	125	+	.	.
scaffold967	subtractBed	intrn	355941	356165	.	+	.	Parent=CGI_10015466;
	scaffold967	TRF	Tandem_Repeat	355941	356165	351	+	.	.
scaffold967	subtractBed	intrn	355631	355786	.	-	.	Parent=CGI_10015467;
	scaffold967	TRF	Tandem_Repeat	355631	355786	125	+	.	.
scaffold967	subtractBed	intrn	355941	356165	.	-	.	Parent=CGI_10015467;
	scaffold967	TRF	Tandem_Repeat	355941	356165	351	+	.	.
scaffold967	subtractBed	intrn	383114	383381	.	-	.	Parent=CGI_10015469;
	scaffold967	TRF	Tandem_Repeat	383114	383394	438	+	.	.
scaffold967	subtractBed	intrn	384692	385021	.	-	.	Parent=CGI_10015469;
	scaffold967	TRF	Tandem_Repeat	384692	385036	496	+	.	.
scaffold967	subtractBed	intrn	395920	396392	.	-	.	Parent=CGI_10015469;
	scaffold967	TRF	Tandem_Repeat	395920	396392	820	+	.	.
scaffold967	subtractBed	intrn	407313	407348	.	-	.	Parent=CGI_10015469;
	scaffold967	TRF	Tandem_Repeat	407313	407348	72	+	.	.
scaffold968	subtractBed	intrn	571	598	.	-	.	Parent=CGI_10006288;
	scaffold968	TRF	Tandem_Repeat	571	598	56	+	.	.
scaffold968	subtractBed	intrn	62993	63048	.	-	.	Parent=CGI_10006294;
	scaffold968	TRF	Tandem_Repeat	62993	63048	112	+	.	.
scaffold968	subtractBed	intrn	63054	63079	.	-	.	Parent=CGI_10006294;
	scaffold968	TRF	Tandem_Repeat	63054	63079	52	+	.	.
scaffold968	subtractBed	intrn	68445	68469	.	-	.	Parent=CGI_10006294;
	scaffold968	TRF	Tandem_Repeat	68445	68469	50	+	.	.
scaffold968	subtractBed	intrn	73749	73775	.	-	.	Parent=CGI_10006295;
	scaffold968	TRF	Tandem_Repeat	73749	73775	54	+	.	.
scaffold968	subtractBed	intrn	73749	73775	.	+	.	Parent=CGI_10006296;
	scaffold968	TRF	Tandem_Repeat	73749	73775	54	+	.	.
scaffold968	subtractBed	intrn	80016	80075	.	+	.	Parent=CGI_10006296;
	scaffold968	TRF	Tandem_Repeat	80016	80075	66	+	.	.
scaffold968	subtractBed	intrn	80007	80074	.	+	.	Parent=CGI_10006296;
	scaffold968	TRF	Tandem_Repeat	80007	80074	55	+	.	.
scaffold968	subtractBed	intrn	80007	80066	.	+	.	Parent=CGI_10006296;
	scaffold968	TRF	Tandem_Repeat	80007	80066	75	+	.	.
scaffold968	subtractBed	intrn	111134	111208	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	111134	111208	143	+	.	.
scaffold968	subtractBed	intrn	114040	114100	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	114040	114100	122	+	.	.
scaffold968	subtractBed	intrn	116880	116939	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	116880	116939	57	+	.	.
scaffold968	subtractBed	intrn	118348	118708	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	118348	118708	332	+	.	.
scaffold968	subtractBed	intrn	118496	118708	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	118496	118708	318	+	.	.
scaffold968	subtractBed	intrn	118826	118946	.	+	.	Parent=CGI_10006297;
	scaffold968	TRF	Tandem_Repeat	118826	118946	143	+	.	.
scaffold968	subtractBed	intrn	119373	120087	.	+	.	Parent=CGI_10006297;
	scaffold968	WUBlastX	LINE_CR1	119373	120161	201	+	.	.
scaffold968	subtractBed	intrn	119628	120087	.	+	.	Parent=CGI_10006297;
	scaffold968	WUBlastX	LINE_I	119628	120638	27	+	.	.
scaffold968	subtractBed	intrn	114560	116770	.	+	.	Parent=CGI_10006297;
	scaffold968	WUBlastX	LINE_RTE-X	114560	116770	765	+	.	.
scaffold968	subtractBed	intrn	114350	115366	.	+	.	Parent=CGI_10006297;
	scaffold968	WUBlastX	LINE_RTE-X	114350	115366	249	+	.	.
scaffold97	subtractBed	intrn	13571	13596	.	-	.	Parent=CGI_10005681;
	scaffold97	TRF	Tandem_Repeat	13571	13596	52	+	.	.
scaffold97	subtractBed	intrn	41387	41834	.	+	.	Parent=CGI_10005683;
	scaffold97	TRF	Tandem_Repeat	41005	41834	258	+	.	.
scaffold97	subtractBed	intrn	41387	41834	.	+	.	Parent=CGI_10005683;
	scaffold97	TRF	Tandem_Repeat	41005	41834	382	+	.	.
scaffold97	subtractBed	intrn	80830	81444	.	-	.	Parent=CGI_10005686;
	scaffold97	WUBlastX	LINE_L1-Tx1	80830	81444	140	+	.	.
scaffold97	subtractBed	intrn	82277	82332	.	-	.	Parent=CGI_10005686;
	scaffold97	TRF	Tandem_Repeat	82277	82332	112	+	.	.
scaffold97	subtractBed	intrn	81480	81947	.	-	.	Parent=CGI_10005686;
	scaffold97	WUBlastX	LINE_L1-Tx1	81480	81947	127	+	.	.
scaffold97	subtractBed	intrn	91749	91824	.	-	.	Parent=CGI_10005686;
	scaffold97	TRF	Tandem_Repeat	91749	91824	50	+	.	.
scaffold97	subtractBed	intrn	88684	88803	.	-	.	Parent=CGI_10005686;
	scaffold97	WUBlastX	DNA_IS4EU	88684	88803	21	+	.	.
scaffold97	subtractBed	intrn	88758	89123	.	-	.	Parent=CGI_10005686;
	scaffold97	WUBlastX	DNA_IS4EU	88758	89123	145	+	.	.
scaffold97	subtractBed	intrn	90361	90459	.	-	.	Parent=CGI_10005686;
	scaffold97	WUBlastX	DNA_IS4EU	90361	90459	35	-	.	.
scaffold97	subtractBed	intrn	97709	97789	.	-	.	Parent=CGI_10005687;
	scaffold97	TRF	Tandem_Repeat	97709	97789	137	+	.	.
scaffold971	subtractBed	intrn	20060	20194	.	+	.	Parent=CGI_10006831;
	scaffold971	WUBlastX	LINE_L2	20060	20194	49	-	.	.
scaffold971	subtractBed	intrn	32557	32602	.	+	.	Parent=CGI_10006831;
	scaffold971	TRF	Tandem_Repeat	32557	32602	92	+	.	.
scaffold971	subtractBed	intrn	141778	141984	.	+	.	Parent=CGI_10006835;
	scaffold971	TRF	Tandem_Repeat	141778	141984	168	+	.	.
scaffold971	subtractBed	intrn	142071	142279	.	+	.	Parent=CGI_10006835;
	scaffold971	TRF	Tandem_Repeat	142071	142279	214	+	.	.
scaffold971	subtractBed	intrn	158161	158274	.	+	.	Parent=CGI_10006837;
	scaffold971	TRF	Tandem_Repeat	158161	158274	140	+	.	.
scaffold971	subtractBed	intrn	159553	159749	.	+	.	Parent=CGI_10006837;
	scaffold971	TRF	Tandem_Repeat	159553	159749	163	+	.	.
scaffold971	subtractBed	intrn	159536	159753	.	+	.	Parent=CGI_10006837;
	scaffold971	TRF	Tandem_Repeat	159536	159753	184	+	.	.
scaffold973	subtractBed	intrn	3244	3302	.	+	.	Parent=CGI_10021541;
	scaffold973	TRF	Tandem_Repeat	3244	3302	70	+	.	.
scaffold973	subtractBed	intrn	3240	3302	.	+	.	Parent=CGI_10021541;
	scaffold973	TRF	Tandem_Repeat	3240	3302	85	+	.	.
scaffold973	subtractBed	intrn	3240	3302	.	+	.	Parent=CGI_10021541;
	scaffold973	TRF	Tandem_Repeat	3240	3302	60	+	.	.
scaffold973	subtractBed	intrn	3240	3302	.	+	.	Parent=CGI_10021541;
	scaffold973	TRF	Tandem_Repeat	3240	3302	73	+	.	.
scaffold973	subtractBed	intrn	4105	4378	.	+	.	Parent=CGI_10021541;
	scaffold973	TRF	Tandem_Repeat	4105	4378	341	+	.	.
scaffold973	subtractBed	intrn	17867	17898	.	+	.	Parent=CGI_10021542;
	scaffold973	TRF	Tandem_Repeat	17867	17898	55	+	.	.
scaffold973	subtractBed	intrn	45373	45434	.	+	.	Parent=CGI_10021543;
	scaffold973	TRF	Tandem_Repeat	45373	45434	124	+	.	.
scaffold973	subtractBed	intrn	46424	46473	.	+	.	Parent=CGI_10021543;
	scaffold973	TRF	Tandem_Repeat	46424	46473	100	+	.	.
scaffold973	subtractBed	intrn	53825	53867	.	+	.	Parent=CGI_10021544;
	scaffold973	TRF	Tandem_Repeat	53825	53867	86	+	.	.
scaffold973	subtractBed	intrn	54856	54901	.	+	.	Parent=CGI_10021544;
	scaffold973	TRF	Tandem_Repeat	54856	54901	92	+	.	.
scaffold973	subtractBed	intrn	63318	63347	.	+	.	Parent=CGI_10021545;
	scaffold973	TRF	Tandem_Repeat	63318	63347	60	+	.	.
scaffold973	subtractBed	intrn	64669	64712	.	+	.	Parent=CGI_10021545;
	scaffold973	TRF	Tandem_Repeat	64669	64712	88	+	.	.
scaffold973	subtractBed	intrn	76814	76843	.	+	.	Parent=CGI_10021546;
	scaffold973	TRF	Tandem_Repeat	76814	76843	60	+	.	.
scaffold973	subtractBed	intrn	78165	78212	.	+	.	Parent=CGI_10021546;
	scaffold973	TRF	Tandem_Repeat	78165	78212	96	+	.	.
scaffold973	subtractBed	intrn	119489	119539	.	-	.	Parent=CGI_10021548;
	scaffold973	TRF	Tandem_Repeat	119489	119539	102	+	.	.
scaffold973	subtractBed	intrn	124069	124118	.	-	.	Parent=CGI_10021548;
	scaffold973	TRF	Tandem_Repeat	124069	124118	100	+	.	.
scaffold973	subtractBed	intrn	138471	138504	.	-	.	Parent=CGI_10021549;
	scaffold973	TRF	Tandem_Repeat	138471	138504	68	+	.	.
scaffold973	subtractBed	intrn	168660	168700	.	+	.	Parent=CGI_10021551;
	scaffold973	TRF	Tandem_Repeat	168660	168700	82	+	.	.
scaffold973	subtractBed	intrn	364234	364400	.	-	.	Parent=CGI_10021552;
	scaffold973	TRF	Tandem_Repeat	364234	364400	271	+	.	.
scaffold973	subtractBed	intrn	364270	364423	.	-	.	Parent=CGI_10021552;
	scaffold973	TRF	Tandem_Repeat	364270	364423	159	+	.	.
scaffold973	subtractBed	intrn	368568	368615	.	-	.	Parent=CGI_10021552;
	scaffold973	TRF	Tandem_Repeat	368568	368615	78	+	.	.
scaffold973	subtractBed	intrn	372350	372782	.	-	.	Parent=CGI_10021553;
	scaffold973	TRF	Tandem_Repeat	372350	372782	496	+	.	.
scaffold973	subtractBed	intrn	416618	416881	.	-	.	Parent=CGI_10021554;
	scaffold973	TRF	Tandem_Repeat	416618	416881	428	+	.	.
scaffold973	subtractBed	intrn	460858	461240	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	460858	461240	568	+	.	.
scaffold973	subtractBed	intrn	467816	468224	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	467816	468224	287	+	.	.
scaffold973	subtractBed	intrn	467842	468274	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	467842	468274	166	+	.	.
scaffold973	subtractBed	intrn	471653	472565	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	471653	472565	1419	+	.	.
scaffold973	subtractBed	intrn	472735	472776	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	472735	472776	68	+	.	.
scaffold973	subtractBed	intrn	472739	472781	.	-	.	Parent=CGI_10021557;
	scaffold973	TRF	Tandem_Repeat	472739	472781	54	+	.	.
scaffold973	subtractBed	intrn	480001	480165	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	480001	480165	118	+	.	.
scaffold973	subtractBed	intrn	482321	482617	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	482321	482617	207	+	.	.
scaffold973	subtractBed	intrn	480774	480944	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_P	480774	480944	34	+	.	.
scaffold973	subtractBed	intrn	482976	483332	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	482976	483332	163	-	.	.
scaffold973	subtractBed	intrn	481620	482351	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_Kolobok-IS4	481620	482351	426	+	.	.
scaffold973	subtractBed	intrn	480774	480989	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_P	480774	480989	24	+	.	.
scaffold973	subtractBed	intrn	484446	484655	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	484446	484655	26	-	.	.
scaffold973	subtractBed	intrn	483756	484178	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	483756	484178	114	-	.	.
scaffold973	subtractBed	intrn	484449	484619	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	484449	484619	76	-	.	.
scaffold973	subtractBed	intrn	484809	484901	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	484809	484901	56	-	.	.
scaffold973	subtractBed	intrn	485240	485359	.	-	.	Parent=CGI_10021557;
	scaffold973	WUBlastX	DNA_IS4EU	485240	485359	29	-	.	.
scaffold973	subtractBed	intrn	560780	560869	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	560780	560869	65	+	.	.
scaffold973	subtractBed	intrn	562975	563061	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	562975	563061	104	+	.	.
scaffold973	subtractBed	intrn	567976	568269	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	567976	568269	241	+	.	.
scaffold973	subtractBed	intrn	568274	568883	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	568274	568883	438	+	.	.
scaffold973	subtractBed	intrn	590269	591087	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	590269	591087	1088	+	.	.
scaffold973	subtractBed	intrn	593440	593781	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	593440	593781	157	+	.	.
scaffold973	subtractBed	intrn	598649	598695	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	598649	598695	85	+	.	.
scaffold973	subtractBed	intrn	602501	602711	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	602501	602711	377	+	.	.
scaffold973	subtractBed	intrn	602945	603072	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	602945	603072	84	+	.	.
scaffold973	subtractBed	intrn	603362	603614	.	-	.	Parent=CGI_10021562;
	scaffold973	TRF	Tandem_Repeat	603362	603614	427	+	.	.
scaffold973	subtractBed	intrn	622522	622569	.	-	.	Parent=CGI_10021563;
	scaffold973	TRF	Tandem_Repeat	622522	622569	51	+	.	.
scaffold973	subtractBed	intrn	622525	622569	.	-	.	Parent=CGI_10021563;
	scaffold973	TRF	Tandem_Repeat	622525	622569	72	+	.	.
scaffold973	subtractBed	intrn	623269	623315	.	-	.	Parent=CGI_10021563;
	scaffold973	TRF	Tandem_Repeat	623269	623315	94	+	.	.
scaffold973	subtractBed	intrn	633657	633718	.	-	.	Parent=CGI_10021563;
	scaffold973	TRF	Tandem_Repeat	633657	633718	115	+	.	.
scaffold973	subtractBed	intrn	640222	640881	.	-	.	Parent=CGI_10021563;
	scaffold973	TRF	Tandem_Repeat	640222	640881	938	+	.	.
scaffold975	subtractBed	intrn	29903	29958	.	+	.	Parent=CGI_10013313;
	scaffold975	TRF	Tandem_Repeat	29903	29958	103	+	.	.
scaffold975	subtractBed	intrn	34610	34665	.	+	.	Parent=CGI_10013313;
	scaffold975	TRF	Tandem_Repeat	34610	34665	103	+	.	.
scaffold975	subtractBed	intrn	41290	42291	.	-	.	Parent=CGI_10013314;
	scaffold975	WUBlastX	DNA_TcMar-Tc1	41290	42291	417	-	.	.
scaffold975	subtractBed	intrn	129941	130039	.	-	.	Parent=CGI_10013325;
	scaffold975	WUBlastX	LINE_RTE-BovB	129941	130039	37	+	.	.
scaffold975	subtractBed	intrn	129876	129941	.	-	.	Parent=CGI_10013325;
	scaffold975	WUBlastX	LINE_RTE-BovB	129876	129941	26	+	.	.
scaffold975	subtractBed	intrn	130719	130889	.	-	.	Parent=CGI_10013325;
	scaffold975	WUBlastX	LINE_RTE-BovB	130719	130889	32	+	.	.
scaffold975	subtractBed	intrn	130246	130725	.	-	.	Parent=CGI_10013325;
	scaffold975	WUBlastX	LINE_RTE-BovB	130246	130725	165	+	.	.
scaffold975	subtractBed	intrn	130099	130743	.	-	.	Parent=CGI_10013325;
	scaffold975	WUBlastX	LINE_RTE-BovB	130099	130743	90	+	.	.
scaffold975	subtractBed	intrn	131259	131290	.	-	.	Parent=CGI_10013325;
	scaffold975	TRF	Tandem_Repeat	131259	131290	55	+	.	.
scaffold975	subtractBed	intrn	137467	137532	.	-	.	Parent=CGI_10013326;
	scaffold975	TRF	Tandem_Repeat	137467	137532	132	+	.	.
scaffold975	subtractBed	intrn	142020	142074	.	-	.	Parent=CGI_10013326;
	scaffold975	TRF	Tandem_Repeat	142020	142074	101	+	.	.
scaffold975	subtractBed	intrn	142153	142200	.	-	.	Parent=CGI_10013326;
	scaffold975	TRF	Tandem_Repeat	142153	142200	96	+	.	.
scaffold975	subtractBed	intrn	156015	156061	.	+	.	Parent=CGI_10013327;
	scaffold975	TRF	Tandem_Repeat	156015	156061	94	+	.	.
scaffold975	subtractBed	intrn	184422	184475	.	+	.	Parent=CGI_10013328;
	scaffold975	TRF	Tandem_Repeat	184422	184475	108	+	.	.
scaffold975	subtractBed	intrn	195965	196072	.	+	.	Parent=CGI_10013328;
	scaffold975	TRF	Tandem_Repeat	195965	196072	64	+	.	.
scaffold975	subtractBed	intrn	243766	243948	.	-	.	Parent=CGI_10013329;
	scaffold975	WUBlastX	LINE_L1-Tx1	243766	243948	42	-	.	.
scaffold975	subtractBed	intrn	244709	244951	.	-	.	Parent=CGI_10013329;
	scaffold975	WUBlastX	LINE_L1-Tx1	244709	244951	72	-	.	.
scaffold975	subtractBed	intrn	244664	245032	.	-	.	Parent=CGI_10013329;
	scaffold975	WUBlastX	LINE_L1	244664	245032	62	-	.	.
scaffold975	subtractBed	intrn	329938	329987	.	-	.	Parent=CGI_10013331;
	scaffold975	TRF	Tandem_Repeat	329938	329987	73	+	.	.
scaffold976	subtractBed	intrn	46375	46992	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Pao	46375	46992	147	-	.	.
scaffold976	subtractBed	intrn	42888	43376	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	42888	43376	24	-	.	.
scaffold976	subtractBed	intrn	46735	47061	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Pao	46735	47061	42	-	.	.
scaffold976	subtractBed	intrn	43785	43937	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	43785	43937	27	-	.	.
scaffold976	subtractBed	intrn	46363	46794	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Pao	46363	46794	209	-	.	.
scaffold976	subtractBed	intrn	41451	42443	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy-Cigr	41451	42443	524	-	.	.
scaffold976	subtractBed	intrn	42410	42889	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy-Cigr	42410	42889	209	-	.	.
scaffold976	subtractBed	intrn	42972	43538	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy-Cigr	42972	43538	160	-	.	.
scaffold976	subtractBed	intrn	43116	43628	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	43116	43628	67	-	.	.
scaffold976	subtractBed	intrn	50442	50477	.	-	.	Parent=CGI_10014002;
	scaffold976	TRF	Tandem_Repeat	50442	50477	72	+	.	.
scaffold976	subtractBed	intrn	51860	51912	.	-	.	Parent=CGI_10014002;
	scaffold976	TRF	Tandem_Repeat	51860	51912	106	+	.	.
scaffold976	subtractBed	intrn	49413	49634	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	DNA_TcMar-Tc1	49413	49634	132	-	.	.
scaffold976	subtractBed	intrn	56797	58854	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	56797	58854	1634	+	.	.
scaffold976	subtractBed	intrn	49658	50002	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	DNA_TcMar-Tc1	49658	50002	51	-	.	.
scaffold976	subtractBed	intrn	49263	49634	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	DNA_TcMar-Tc1	49263	49634	99	-	.	.
scaffold976	subtractBed	intrn	54923	55180	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	54923	55180	43	+	.	.
scaffold976	subtractBed	intrn	54977	56803	.	-	.	Parent=CGI_10014002;
	scaffold976	WUBlastX	LTR_Gypsy	54977	56803	1099	+	.	.
scaffold976	subtractBed	intrn	84330	84370	.	-	.	Parent=CGI_10014004;
	scaffold976	TRF	Tandem_Repeat	84330	84370	55	+	.	.
scaffold976	subtractBed	intrn	93596	93631	.	+	.	Parent=CGI_10014005;
	scaffold976	TRF	Tandem_Repeat	93596	93631	72	+	.	.
scaffold976	subtractBed	intrn	94360	94487	.	+	.	Parent=CGI_10014005;
	scaffold976	TRF	Tandem_Repeat	94360	94487	202	+	.	.
scaffold976	subtractBed	intrn	107265	107344	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	107265	107344	74	+	.	.
scaffold976	subtractBed	intrn	108177	108768	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	108177	108768	979	+	.	.
scaffold976	subtractBed	intrn	108177	109195	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	108177	109195	1270	+	.	.
scaffold976	subtractBed	intrn	108177	109195	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	108177	109195	1262	+	.	.
scaffold976	subtractBed	intrn	108775	109196	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	108775	109196	200	+	.	.
scaffold976	subtractBed	intrn	108772	109195	.	+	.	Parent=CGI_10014006;
	scaffold976	TRF	Tandem_Repeat	108772	109195	431	+	.	.
scaffold976	subtractBed	intrn	117952	118179	.	+	.	Parent=CGI_10014006;
	scaffold976	WUBlastX	LINE_L2	117952	118179	24	+	.	.
scaffold976	subtractBed	intrn	116726	117409	.	+	.	Parent=CGI_10014006;
	scaffold976	WUBlastX	LINE_L1-Tx1	116726	117409	426	+	.	.
scaffold976	subtractBed	intrn	276146	276179	.	+	.	Parent=CGI_10014014;
	scaffold976	TRF	Tandem_Repeat	276146	276179	50	+	.	.
scaffold976	subtractBed	intrn	275067	275273	.	+	.	Parent=CGI_10014014;
	scaffold976	WUBlastX	DNA_Harbinger	275067	275273	122	+	.	.
scaffold976	subtractBed	intrn	275319	275369	.	+	.	Parent=CGI_10014014;
	scaffold976	WUBlastX	DNA_Harbinger	275319	275369	28	+	.	.
scaffold976	subtractBed	intrn	275067	275342	.	+	.	Parent=CGI_10014014;
	scaffold976	WUBlastX	DNA_Harbinger	275067	275342	93	+	.	.
scaffold976	subtractBed	intrn	298357	298410	.	+	.	Parent=CGI_10014015;
	scaffold976	TRF	Tandem_Repeat	298357	298410	90	+	.	.
scaffold976	subtractBed	intrn	298357	298410	.	-	.	Parent=CGI_10014016;
	scaffold976	TRF	Tandem_Repeat	298357	298410	90	+	.	.
scaffold976	subtractBed	intrn	314613	314656	.	-	.	Parent=CGI_10014016;
	scaffold976	TRF	Tandem_Repeat	314613	314656	88	+	.	.
scaffold976	subtractBed	intrn	315448	315526	.	-	.	Parent=CGI_10014016;
	scaffold976	TRF	Tandem_Repeat	315448	315526	149	+	.	.
scaffold976	subtractBed	intrn	314613	314656	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	314613	314656	88	+	.	.
scaffold976	subtractBed	intrn	315448	315526	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	315448	315526	149	+	.	.
scaffold976	subtractBed	intrn	325215	325264	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	325215	325264	55	+	.	.
scaffold976	subtractBed	intrn	325669	325719	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	325669	325719	102	+	.	.
scaffold976	subtractBed	intrn	327317	327393	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	327317	327393	86	+	.	.
scaffold976	subtractBed	intrn	327879	327980	.	+	.	Parent=CGI_10014017;
	scaffold976	WUBlastX	LINE_Penelope	327879	327980	32	+	.	.
scaffold976	subtractBed	intrn	328018	328239	.	+	.	Parent=CGI_10014017;
	scaffold976	WUBlastX	LINE_Penelope	328018	328239	46	+	.	.
scaffold976	subtractBed	intrn	334860	334899	.	+	.	Parent=CGI_10014017;
	scaffold976	TRF	Tandem_Repeat	334860	334899	53	+	.	.
scaffold976	subtractBed	intrn	359227	359947	.	+	.	Parent=CGI_10014020;
	scaffold976	TRF	Tandem_Repeat	359227	359947	921	+	.	.
scaffold976	subtractBed	intrn	362426	362488	.	+	.	Parent=CGI_10014020;
	scaffold976	TRF	Tandem_Repeat	362426	362488	119	+	.	.
scaffold976	subtractBed	intrn	369724	369754	.	+	.	Parent=CGI_10014020;
	scaffold976	TRF	Tandem_Repeat	369724	369754	62	+	.	.
scaffold976	subtractBed	intrn	375562	375620	.	+	.	Parent=CGI_10014020;
	scaffold976	TRF	Tandem_Repeat	375562	375620	118	+	.	.
scaffold976	subtractBed	intrn	372295	372846	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	372295	372846	62	+	.	.
scaffold976	subtractBed	intrn	372920	373162	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	372920	373162	20	+	.	.
scaffold976	subtractBed	intrn	372932	373099	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	372932	373099	21	+	.	.
scaffold976	subtractBed	intrn	371097	371345	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	371097	371345	98	+	.	.
scaffold976	subtractBed	intrn	373159	373419	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	373159	373419	37	+	.	.
scaffold976	subtractBed	intrn	371007	371357	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	371007	371357	80	+	.	.
scaffold976	subtractBed	intrn	371100	371447	.	+	.	Parent=CGI_10014020;
	scaffold976	WUBlastX	LINE_L2	371100	371447	24	+	.	.
scaffold976	subtractBed	intrn	377755	377785	.	+	.	Parent=CGI_10014020;
	scaffold976	TRF	Tandem_Repeat	377755	377785	62	+	.	.
scaffold977	subtractBed	intrn	87805	87841	.	+	.	Parent=CGI_10017161;
	scaffold977	TRF	Tandem_Repeat	87805	87841	74	+	.	.
scaffold977	subtractBed	intrn	87841	87883	.	+	.	Parent=CGI_10017161;
	scaffold977	TRF	Tandem_Repeat	87841	87883	59	+	.	.
scaffold977	subtractBed	intrn	97634	98400	.	+	.	Parent=CGI_10017161;
	scaffold977	TRF	Tandem_Repeat	97634	98400	896	+	.	.
scaffold977	subtractBed	intrn	149598	151587	.	-	.	Parent=CGI_10017163;
	scaffold977	TRF	Tandem_Repeat	149598	151587	3665	+	.	.
scaffold977	subtractBed	intrn	156277	156516	.	-	.	Parent=CGI_10017163;
	scaffold977	WUBlastX	LINE_CR1-L2	156277	156516	40	+	.	.
scaffold977	subtractBed	intrn	164539	164556	.	-	.	Parent=CGI_10017163;
	scaffold977	WUBlastX	DNA_hAT	164539	165288	372	+	.	.
scaffold977	subtractBed	intrn	185090	186214	.	-	.	Parent=CGI_10017167;
	scaffold977	TRF	Tandem_Repeat	185090	186214	1541	+	.	.
scaffold977	subtractBed	intrn	218168	218322	.	-	.	Parent=CGI_10017170;
	scaffold977	TRF	Tandem_Repeat	218168	218322	86	+	.	.
scaffold977	subtractBed	intrn	218920	218977	.	-	.	Parent=CGI_10017170;
	scaffold977	TRF	Tandem_Repeat	218920	218977	80	+	.	.
scaffold977	subtractBed	intrn	219912	220009	.	-	.	Parent=CGI_10017170;
	scaffold977	TRF	Tandem_Repeat	219912	220009	92	+	.	.
scaffold977	subtractBed	intrn	236842	236895	.	-	.	Parent=CGI_10017170;
	scaffold977	TRF	Tandem_Repeat	236842	236895	108	+	.	.
scaffold977	subtractBed	intrn	404961	406642	.	+	.	Parent=CGI_10017171;
	scaffold977	TRF	Tandem_Repeat	404961	406642	2486	+	.	.
scaffold977	subtractBed	intrn	405232	406642	.	+	.	Parent=CGI_10017171;
	scaffold977	TRF	Tandem_Repeat	405232	406642	1980	+	.	.
scaffold977	subtractBed	intrn	410276	411796	.	+	.	Parent=CGI_10017171;
	scaffold977	TRF	Tandem_Repeat	410276	411796	1790	+	.	.
scaffold977	subtractBed	intrn	424056	424102	.	+	.	Parent=CGI_10017172;
	scaffold977	TRF	Tandem_Repeat	424056	424102	58	+	.	.
scaffold977	subtractBed	intrn	465443	466363	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	465443	466373	1043	+	.	.
scaffold977	subtractBed	intrn	465443	466363	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	465443	466373	1043	+	.	.
scaffold977	subtractBed	intrn	468580	469149	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	468580	469149	510	+	.	.
scaffold977	subtractBed	intrn	469729	469817	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	469729	469817	160	+	.	.
scaffold977	subtractBed	intrn	470339	470695	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	470336	470695	245	+	.	.
scaffold977	subtractBed	intrn	471159	471839	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	471159	471839	425	+	.	.
scaffold977	subtractBed	intrn	471378	471839	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	471378	471839	298	+	.	.
scaffold977	subtractBed	intrn	471544	471772	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	471544	471772	146	+	.	.
scaffold977	subtractBed	intrn	472548	472944	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	472525	472944	619	+	.	.
scaffold977	subtractBed	intrn	474441	474830	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	474441	474830	428	+	.	.
scaffold977	subtractBed	intrn	475645	476277	.	+	.	Parent=CGI_10017174;
	scaffold977	TRF	Tandem_Repeat	475645	476277	434	+	.	.
scaffold977	subtractBed	intrn	477380	477467	.	-	.	Parent=CGI_10017175;
	scaffold977	TRF	Tandem_Repeat	477380	477467	167	+	.	.
scaffold977	subtractBed	intrn	479867	479967	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	479867	479967	96	+	.	.
scaffold977	subtractBed	intrn	482634	482818	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	482634	482818	325	+	.	.
scaffold977	subtractBed	intrn	484265	484482	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	484265	484482	373	+	.	.
scaffold977	subtractBed	intrn	486288	486707	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	486288	486707	287	+	.	.
scaffold977	subtractBed	intrn	486288	487506	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	486288	487506	811	+	.	.
scaffold977	subtractBed	intrn	486763	487509	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	486763	487509	1106	+	.	.
scaffold977	subtractBed	intrn	486850	486973	.	-	.	Parent=CGI_10017176;
	scaffold977	TRF	Tandem_Repeat	486850	486973	65	+	.	.
scaffold98	subtractBed	intrn	7346	7546	.	+	.	Parent=CGI_10012779;
	scaffold98	TRF	Tandem_Repeat	7346	7546	163	+	.	.
scaffold98	subtractBed	intrn	7545	7736	.	+	.	Parent=CGI_10012779;
	scaffold98	TRF	Tandem_Repeat	7545	7736	134	+	.	.
scaffold98	subtractBed	intrn	28957	28995	.	+	.	Parent=CGI_10012779;
	scaffold98	TRF	Tandem_Repeat	28957	28995	78	+	.	.
scaffold98	subtractBed	intrn	30788	30829	.	+	.	Parent=CGI_10012779;
	scaffold98	TRF	Tandem_Repeat	30788	30829	75	+	.	.
scaffold98	subtractBed	intrn	255363	255408	.	-	.	Parent=CGI_10012783;
	scaffold98	TRF	Tandem_Repeat	255363	255408	92	+	.	.
scaffold98	subtractBed	intrn	255363	255408	.	+	.	Parent=CGI_10012784;
	scaffold98	TRF	Tandem_Repeat	255363	255408	92	+	.	.
scaffold98	subtractBed	intrn	259575	259620	.	+	.	Parent=CGI_10012785;
	scaffold98	TRF	Tandem_Repeat	259575	259620	92	+	.	.
scaffold98	subtractBed	intrn	270057	270099	.	+	.	Parent=CGI_10012786;
	scaffold98	TRF	Tandem_Repeat	270057	270099	86	+	.	.
scaffold980	subtractBed	intrn	19695	19996	.	+	.	Parent=CGI_10019201;
	scaffold980	TRF	Tandem_Repeat	19695	19996	453	+	.	.
scaffold980	subtractBed	intrn	32494	32533	.	-	.	Parent=CGI_10019203;
	scaffold980	TRF	Tandem_Repeat	32494	32533	80	+	.	.
scaffold980	subtractBed	intrn	52734	53655	.	-	.	Parent=CGI_10019204;
	scaffold980	TRF	Tandem_Repeat	52734	53655	1374	+	.	.
scaffold980	subtractBed	intrn	54518	54595	.	-	.	Parent=CGI_10019204;
	scaffold980	TRF	Tandem_Repeat	54518	54595	52	+	.	.
scaffold980	subtractBed	intrn	54698	54775	.	-	.	Parent=CGI_10019204;
	scaffold980	TRF	Tandem_Repeat	54698	54775	63	+	.	.
scaffold980	subtractBed	intrn	55439	55487	.	-	.	Parent=CGI_10019204;
	scaffold980	TRF	Tandem_Repeat	55439	55487	98	+	.	.
scaffold980	subtractBed	intrn	77767	78126	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_RTE-X	77767	78126	80	-	.	.
scaffold980	subtractBed	intrn	78245	78658	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_RTE-X	78245	78658	233	-	.	.
scaffold980	subtractBed	intrn	78621	79466	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_RTE-X	78621	79466	494	-	.	.
scaffold980	subtractBed	intrn	77698	78246	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_RTE-X	77698	78246	74	-	.	.
scaffold980	subtractBed	intrn	77815	78210	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_RTE-X	77815	78210	80	-	.	.
scaffold980	subtractBed	intrn	78927	79571	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_L2	78927	79571	108	-	.	.
scaffold980	subtractBed	intrn	80376	80426	.	-	.	Parent=CGI_10019204;
	scaffold980	WUBlastX	LINE_I	80376	80426	22	-	.	.
scaffold980	subtractBed	intrn	52734	53655	.	+	.	Parent=CGI_10019205;
	scaffold980	TRF	Tandem_Repeat	52734	53655	1374	+	.	.
scaffold980	subtractBed	intrn	54518	54595	.	+	.	Parent=CGI_10019205;
	scaffold980	TRF	Tandem_Repeat	54518	54595	52	+	.	.
scaffold980	subtractBed	intrn	54698	54775	.	+	.	Parent=CGI_10019205;
	scaffold980	TRF	Tandem_Repeat	54698	54775	63	+	.	.
scaffold980	subtractBed	intrn	55439	55487	.	+	.	Parent=CGI_10019205;
	scaffold980	TRF	Tandem_Repeat	55439	55487	98	+	.	.
scaffold980	subtractBed	intrn	165599	165874	.	-	.	Parent=CGI_10019213;
	scaffold980	WUBlastX	LINE_RTE-X	165599	165874	33	+	.	.
scaffold980	subtractBed	intrn	164936	165277	.	-	.	Parent=CGI_10019213;
	scaffold980	WUBlastX	LINE_RTE-X	164936	165277	36	+	.	.
scaffold980	subtractBed	intrn	165590	165724	.	-	.	Parent=CGI_10019213;
	scaffold980	WUBlastX	LINE_RTE-X	165590	165724	60	+	.	.
scaffold980	subtractBed	intrn	165587	165745	.	-	.	Parent=CGI_10019213;
	scaffold980	WUBlastX	LINE_RTE-X	165587	165745	42	+	.	.
scaffold980	subtractBed	intrn	165166	165585	.	-	.	Parent=CGI_10019213;
	scaffold980	WUBlastX	LINE_RTE-X	165166	165585	124	+	.	.
scaffold980	subtractBed	intrn	167459	167494	.	-	.	Parent=CGI_10019213;
	scaffold980	TRF	Tandem_Repeat	167459	167494	72	+	.	.
scaffold980	subtractBed	intrn	177128	177791	.	+	.	Parent=CGI_10019214;
	scaffold980	TRF	Tandem_Repeat	177128	177791	209	+	.	.
scaffold980	subtractBed	intrn	177380	177784	.	+	.	Parent=CGI_10019214;
	scaffold980	TRF	Tandem_Repeat	177380	177784	447	+	.	.
scaffold980	subtractBed	intrn	177112	177784	.	+	.	Parent=CGI_10019214;
	scaffold980	TRF	Tandem_Repeat	177112	177784	487	+	.	.
scaffold980	subtractBed	intrn	177851	178037	.	+	.	Parent=CGI_10019214;
	scaffold980	TRF	Tandem_Repeat	177851	178037	207	+	.	.
scaffold980	subtractBed	intrn	180050	180957	.	+	.	Parent=CGI_10019214;
	scaffold980	TRF	Tandem_Repeat	180050	180957	1163	+	.	.
scaffold980	subtractBed	intrn	362909	362957	.	+	.	Parent=CGI_10019222;
	scaffold980	TRF	Tandem_Repeat	362909	362957	57	+	.	.
scaffold980	subtractBed	intrn	363136	364459	.	+	.	Parent=CGI_10019222;
	scaffold980	TRF	Tandem_Repeat	363136	364459	1340	+	.	.
scaffold980	subtractBed	intrn	439333	439374	.	-	.	Parent=CGI_10019232;
	scaffold980	TRF	Tandem_Repeat	439333	439374	66	+	.	.
scaffold980	subtractBed	intrn	442401	442642	.	+	.	Parent=CGI_10019233;
	scaffold980	TRF	Tandem_Repeat	442401	442642	308	+	.	.
scaffold980	subtractBed	intrn	523493	523535	.	+	.	Parent=CGI_10019242;
	scaffold980	TRF	Tandem_Repeat	523493	523535	86	+	.	.
scaffold980	subtractBed	intrn	523818	523859	.	+	.	Parent=CGI_10019242;
	scaffold980	TRF	Tandem_Repeat	523818	523859	84	+	.	.
scaffold980	subtractBed	intrn	538696	538721	.	+	.	Parent=CGI_10019244;
	scaffold980	TRF	Tandem_Repeat	538696	538721	52	+	.	.
scaffold980	subtractBed	intrn	545445	546190	.	+	.	Parent=CGI_10019244;
	scaffold980	TRF	Tandem_Repeat	545445	546190	977	+	.	.
scaffold980	subtractBed	intrn	547254	547321	.	+	.	Parent=CGI_10019244;
	scaffold980	TRF	Tandem_Repeat	547254	547321	70	+	.	.
scaffold980	subtractBed	intrn	551151	551897	.	+	.	Parent=CGI_10019244;
	scaffold980	TRF	Tandem_Repeat	551151	551897	880	+	.	.
scaffold980	subtractBed	intrn	553501	553530	.	+	.	Parent=CGI_10019244;
	scaffold980	TRF	Tandem_Repeat	553501	553530	51	+	.	.
scaffold983	subtractBed	intrn	247561	247995	.	-	.	Parent=CGI_10014030;
	scaffold983	WUBlastX	DNA_NOF	247561	247995	32	+	.	.
scaffold983	subtractBed	intrn	247470	247595	.	-	.	Parent=CGI_10014030;
	scaffold983	WUBlastX	DNA_NOF	247470	247595	22	+	.	.
scaffold983	subtractBed	intrn	247678	247986	.	-	.	Parent=CGI_10014030;
	scaffold983	WUBlastX	DNA_NOF?	247678	247986	102	+	.	.
scaffold983	subtractBed	intrn	247648	247824	.	-	.	Parent=CGI_10014030;
	scaffold983	WUBlastX	DNA_IS4EU	247648	247824	38	+	.	.
scaffold983	subtractBed	intrn	354520	354565	.	+	.	Parent=CGI_10014035;
	scaffold983	TRF	Tandem_Repeat	354520	354565	92	+	.	.
scaffold984	subtractBed	intrn	3347	3826	.	+	.	Parent=CGI_10000576;
	scaffold984	WUBlastX	LINE_L1-Tx1	3347	3826	63	+	.	.
scaffold984	subtractBed	intrn	3335	3736	.	+	.	Parent=CGI_10000576;
	scaffold984	WUBlastX	LINE_L1-Tx1	3335	3736	64	+	.	.
scaffold986	subtractBed	intrn	23085	23124	.	+	.	Parent=CGI_10009956;
	scaffold986	TRF	Tandem_Repeat	23085	23124	80	+	.	.
scaffold986	subtractBed	intrn	42345	42398	.	+	.	Parent=CGI_10009957;
	scaffold986	TRF	Tandem_Repeat	42345	42398	99	+	.	.
scaffold986	subtractBed	intrn	46142	46516	.	+	.	Parent=CGI_10009957;
	scaffold986	WUBlastX	DNA_hAT-Ac	46142	46516	38	+	.	.
scaffold986	subtractBed	intrn	46677	47051	.	+	.	Parent=CGI_10009957;
	scaffold986	WUBlastX	DNA_hAT-Ac	46677	47051	187	+	.	.
scaffold986	subtractBed	intrn	46590	47048	.	+	.	Parent=CGI_10009957;
	scaffold986	WUBlastX	DNA_hAT-Ac	46590	47048	157	+	.	.
scaffold986	subtractBed	intrn	49037	49089	.	+	.	Parent=CGI_10009957;
	scaffold986	TRF	Tandem_Repeat	49037	49089	97	+	.	.
scaffold986	subtractBed	intrn	52551	52802	.	+	.	Parent=CGI_10009957;
	scaffold986	WUBlastX	DNA_TcMar-Tc1	52551	52802	76	-	.	.
scaffold986	subtractBed	intrn	128189	128417	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	128189	128417	166	+	.	.
scaffold986	subtractBed	intrn	128197	128453	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	128197	128453	121	+	.	.
scaffold986	subtractBed	intrn	128631	128774	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	128631	128774	120	+	.	.
scaffold986	subtractBed	intrn	128695	128932	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	128695	128932	245	+	.	.
scaffold986	subtractBed	intrn	128631	128922	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	128631	128922	221	+	.	.
scaffold986	subtractBed	intrn	131192	131352	.	+	.	Parent=CGI_10009959;
	scaffold986	TRF	Tandem_Repeat	131192	131352	205	+	.	.
scaffold986	subtractBed	intrn	138060	138096	.	+	.	Parent=CGI_10009960;
	scaffold986	TRF	Tandem_Repeat	138060	138096	74	+	.	.
scaffold986	subtractBed	intrn	137234	137431	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	137234	137431	61	-	.	.
scaffold986	subtractBed	intrn	137571	137768	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	137571	137768	117	-	.	.
scaffold986	subtractBed	intrn	137855	137941	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	137855	137941	53	-	.	.
scaffold986	subtractBed	intrn	138128	138250	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	138128	138250	82	-	.	.
scaffold986	subtractBed	intrn	137804	137941	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	137804	137941	20	-	.	.
scaffold986	subtractBed	intrn	138790	139134	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	138790	139134	131	-	.	.
scaffold986	subtractBed	intrn	136279	136446	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	136279	136446	49	+	.	.
scaffold986	subtractBed	intrn	138128	138277	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	138128	138277	55	-	.	.
scaffold986	subtractBed	intrn	138760	139170	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	138760	139170	99	-	.	.
scaffold986	subtractBed	intrn	137831	137971	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	137831	137971	51	-	.	.
scaffold986	subtractBed	intrn	138104	138244	.	+	.	Parent=CGI_10009960;
	scaffold986	WUBlastX	DNA_Harbinger	138104	138244	20	-	.	.
scaffold986	subtractBed	intrn	207101	207125	.	-	.	Parent=CGI_10009964;
	scaffold986	TRF	Tandem_Repeat	207101	207125	50	+	.	.
scaffold986	subtractBed	intrn	230698	231089	.	-	.	Parent=CGI_10009965;
	scaffold986	TRF	Tandem_Repeat	230698	231089	741	+	.	.
scaffold986	subtractBed	intrn	233195	234226	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_Proto2	233195	234226	99	-	.	.
scaffold986	subtractBed	intrn	232752	233096	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_RTE-X	232752	233096	21	-	.	.
scaffold986	subtractBed	intrn	233183	233791	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_L1	233183	233791	106	-	.	.
scaffold986	subtractBed	intrn	233183	233623	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_L1	233183	233623	112	-	.	.
scaffold986	subtractBed	intrn	233180	233962	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_Jockey	233180	233962	99	-	.	.
scaffold986	subtractBed	intrn	232839	233090	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_RTE-BovB	232839	233090	74	-	.	.
scaffold986	subtractBed	intrn	232818	233171	.	-	.	Parent=CGI_10009965;
	scaffold986	WUBlastX	LINE_RTE-X	232818	233171	72	-	.	.
scaffold987	subtractBed	intrn	77262	77317	.	-	.	Parent=CGI_10015837;
	scaffold987	TRF	Tandem_Repeat	77262	77317	112	+	.	.
scaffold987	subtractBed	intrn	76082	76305	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L1	76024	76305	27	-	.	.
scaffold987	subtractBed	intrn	76361	76501	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L1-Tx1	76361	76501	55	-	.	.
scaffold987	subtractBed	intrn	77887	78513	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_CR1	77887	78513	147	-	.	.
scaffold987	subtractBed	intrn	76117	76371	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L1-Tx1	76117	76371	32	-	.	.
scaffold987	subtractBed	intrn	76494	76724	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L1-Tx1	76494	76724	84	-	.	.
scaffold987	subtractBed	intrn	80403	80573	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_CR1-L2	80403	80573	81	+	.	.
scaffold987	subtractBed	intrn	83548	83589	.	-	.	Parent=CGI_10015837;
	scaffold987	TRF	Tandem_Repeat	83548	83589	84	+	.	.
scaffold987	subtractBed	intrn	81483	81938	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L2	81483	81938	246	+	.	.
scaffold987	subtractBed	intrn	81285	81989	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_CR1-L2	81285	81989	199	+	.	.
scaffold987	subtractBed	intrn	81570	82166	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_L2	81570	82166	80	+	.	.
scaffold987	subtractBed	intrn	81552	82067	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LINE_CR1	81552	82067	87	+	.	.
scaffold987	subtractBed	intrn	88195	88248	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_Gypsy	88195	88248	27	-	.	.
scaffold987	subtractBed	intrn	88245	88679	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	88245	88679	95	-	.	.
scaffold987	subtractBed	intrn	84987	85763	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	84987	85763	425	-	.	.
scaffold987	subtractBed	intrn	87137	88114	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	87137	88114	422	-	.	.
scaffold987	subtractBed	intrn	85985	86347	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	85985	86347	275	-	.	.
scaffold987	subtractBed	intrn	87137	87964	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	87137	87964	622	-	.	.
scaffold987	subtractBed	intrn	84972	86003	.	-	.	Parent=CGI_10015837;
	scaffold987	WUBlastX	LTR_DIRS	84972	86003	342	-	.	.
scaffold987	subtractBed	intrn	92402	92444	.	+	.	Parent=CGI_10015838;
	scaffold987	TRF	Tandem_Repeat	92402	92444	86	+	.	.
scaffold987	subtractBed	intrn	98073	98509	.	+	.	Parent=CGI_10015838;
	scaffold987	TRF	Tandem_Repeat	98073	98509	779	+	.	.
scaffold987	subtractBed	intrn	98073	98509	.	-	.	Parent=CGI_10015839;
	scaffold987	TRF	Tandem_Repeat	98073	98509	779	+	.	.
scaffold987	subtractBed	intrn	130466	130512	.	-	.	Parent=CGI_10015840;
	scaffold987	TRF	Tandem_Repeat	130466	130512	76	+	.	.
scaffold987	subtractBed	intrn	136986	138363	.	-	.	Parent=CGI_10015840;
	scaffold987	TRF	Tandem_Repeat	136986	138363	865	+	.	.
scaffold987	subtractBed	intrn	240128	240197	.	+	.	Parent=CGI_10015844;
	scaffold987	TRF	Tandem_Repeat	240128	240197	133	+	.	.
scaffold987	subtractBed	intrn	241309	241341	.	+	.	Parent=CGI_10015844;
	scaffold987	TRF	Tandem_Repeat	241309	241341	66	+	.	.
scaffold987	subtractBed	intrn	241309	241341	.	-	.	Parent=CGI_10015845;
	scaffold987	TRF	Tandem_Repeat	241309	241341	66	+	.	.
scaffold987	subtractBed	intrn	255355	255425	.	-	.	Parent=CGI_10015845;
	scaffold987	TRF	Tandem_Repeat	255355	255425	135	+	.	.
scaffold987	subtractBed	intrn	256840	256880	.	-	.	Parent=CGI_10015845;
	scaffold987	TRF	Tandem_Repeat	256840	256880	82	+	.	.
scaffold987	subtractBed	intrn	306704	306915	.	+	.	Parent=CGI_10015851;
	scaffold987	TRF	Tandem_Repeat	306680	306915	386	+	.	.
scaffold987	subtractBed	intrn	310625	310811	.	+	.	Parent=CGI_10015851;
	scaffold987	TRF	Tandem_Repeat	310625	310811	164	+	.	.
scaffold987	subtractBed	intrn	311619	311693	.	+	.	Parent=CGI_10015851;
	scaffold987	TRF	Tandem_Repeat	311619	311693	89	+	.	.
scaffold987	subtractBed	intrn	332962	334555	.	+	.	Parent=CGI_10015851;
	scaffold987	TRF	Tandem_Repeat	332962	334555	1796	+	.	.
scaffold99	subtractBed	intrn	29750	29797	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	29750	29797	96	+	.	.
scaffold99	subtractBed	intrn	31585	32076	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_CR1-L2	31585	32076	129	-	.	.
scaffold99	subtractBed	intrn	31558	31722	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_R1	31558	31722	27	-	.	.
scaffold99	subtractBed	intrn	32079	32372	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_L2	32079	32372	175	-	.	.
scaffold99	subtractBed	intrn	31401	31517	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_RTE-X	31401	31517	52	-	.	.
scaffold99	subtractBed	intrn	34990	35155	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	34990	35155	185	+	.	.
scaffold99	subtractBed	intrn	35001	35241	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	35001	35241	215	+	.	.
scaffold99	subtractBed	intrn	36758	36980	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	36758	36980	215	+	.	.
scaffold99	subtractBed	intrn	36758	36980	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	36758	36980	161	+	.	.
scaffold99	subtractBed	intrn	37333	37425	.	+	.	Parent=CGI_10021189;
	scaffold99	TRF	Tandem_Repeat	37333	37425	177	+	.	.
scaffold99	subtractBed	intrn	32382	33008	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_CR1-L2	32382	33008	233	-	.	.
scaffold99	subtractBed	intrn	32487	33242	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_L2	32487	33242	141	-	.	.
scaffold99	subtractBed	intrn	32487	33020	.	+	.	Parent=CGI_10021189;
	scaffold99	WUBlastX	LINE_L2	32487	33020	359	-	.	.
scaffold99	subtractBed	intrn	103778	103933	.	-	.	Parent=CGI_10021190;
	scaffold99	TRF	Tandem_Repeat	103778	103933	109	+	.	.
scaffold99	subtractBed	intrn	103776	104176	.	-	.	Parent=CGI_10021190;
	scaffold99	TRF	Tandem_Repeat	103776	104176	173	+	.	.
scaffold99	subtractBed	intrn	103939	104176	.	-	.	Parent=CGI_10021190;
	scaffold99	TRF	Tandem_Repeat	103939	104176	163	+	.	.
scaffold99	subtractBed	intrn	104398	104574	.	-	.	Parent=CGI_10021190;
	scaffold99	TRF	Tandem_Repeat	104398	104574	124	+	.	.
scaffold99	subtractBed	intrn	108050	108427	.	-	.	Parent=CGI_10021191;
	scaffold99	WUBlastX	DNA_IS4EU	108050	108427	70	+	.	.
scaffold99	subtractBed	intrn	107906	108352	.	-	.	Parent=CGI_10021191;
	scaffold99	WUBlastX	DNA_Kolobok-IS4	107906	108352	83	+	.	.
scaffold99	subtractBed	intrn	107897	108253	.	-	.	Parent=CGI_10021191;
	scaffold99	WUBlastX	DNA_IS4EU	107897	108253	100	+	.	.
scaffold99	subtractBed	intrn	232469	232509	.	-	.	Parent=CGI_10021194;
	scaffold99	TRF	Tandem_Repeat	232469	232509	82	+	.	.
scaffold99	subtractBed	intrn	235700	235850	.	+	.	Parent=CGI_10021195;
	scaffold99	TRF	Tandem_Repeat	235700	235850	196	+	.	.
scaffold99	subtractBed	intrn	237245	237301	.	+	.	Parent=CGI_10021195;
	scaffold99	TRF	Tandem_Repeat	237245	237301	114	+	.	.
scaffold99	subtractBed	intrn	240685	240870	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	240685	240960	26	+	.	.
scaffold99	subtractBed	intrn	240673	240756	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	240673	240756	31	+	.	.
scaffold99	subtractBed	intrn	240941	240960	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	240685	240960	26	+	.	.
scaffold99	subtractBed	intrn	241548	241548	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	241548	241661	34	+	.	.
scaffold99	subtractBed	intrn	241083	241424	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	241083	241424	75	+	.	.
scaffold99	subtractBed	intrn	241023	241421	.	+	.	Parent=CGI_10021195;
	scaffold99	WUBlastX	DNA_MuDR	241023	241421	62	+	.	.
scaffold99	subtractBed	intrn	243401	243447	.	-	.	Parent=CGI_10021196;
	scaffold99	TRF	Tandem_Repeat	243401	243447	85	+	.	.
scaffold99	subtractBed	intrn	271257	271295	.	-	.	Parent=CGI_10021197;
	scaffold99	TRF	Tandem_Repeat	271257	271295	78	+	.	.
scaffold99	subtractBed	intrn	271768	271830	.	-	.	Parent=CGI_10021197;
	scaffold99	TRF	Tandem_Repeat	271768	271830	117	+	.	.
scaffold99	subtractBed	intrn	272199	272255	.	-	.	Parent=CGI_10021197;
	scaffold99	TRF	Tandem_Repeat	272199	272255	105	+	.	.
scaffold99	subtractBed	intrn	355319	355379	.	+	.	Parent=CGI_10021201;
	scaffold99	TRF	Tandem_Repeat	355319	355379	122	+	.	.
scaffold99	subtractBed	intrn	357388	357966	.	+	.	Parent=CGI_10021201;
	scaffold99	WUBlastX	LINE_CR1	357388	357966	167	+	.	.
scaffold99	subtractBed	intrn	357583	358021	.	+	.	Parent=CGI_10021201;
	scaffold99	WUBlastX	LINE_I	357583	358281	35	+	.	.
scaffold99	subtractBed	intrn	358665	359084	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	358665	359084	177	+	.	.
scaffold99	subtractBed	intrn	359682	360329	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	359682	360329	314	+	.	.
scaffold99	subtractBed	intrn	358707	360314	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	358707	360314	163	+	.	.
scaffold99	subtractBed	intrn	361947	362120	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	361947	362120	30	+	.	.
scaffold99	subtractBed	intrn	361959	362267	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	361959	362267	28	+	.	.
scaffold99	subtractBed	intrn	360328	361275	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	360328	361275	338	+	.	.
scaffold99	subtractBed	intrn	360328	361449	.	+	.	Parent=CGI_10021202;
	scaffold99	WUBlastX	LINE_L1-Tx1	360328	361449	246	+	.	.
scaffold99	subtractBed	intrn	406444	406521	.	-	.	Parent=CGI_10021206;
	scaffold99	TRF	Tandem_Repeat	406444	406521	138	+	.	.
scaffold99	subtractBed	intrn	420141	420188	.	-	.	Parent=CGI_10021206;
	scaffold99	TRF	Tandem_Repeat	420141	420188	71	+	.	.
scaffold99	subtractBed	intrn	463126	463719	.	-	.	Parent=CGI_10021208;
	scaffold99	WUBlastX	DNA_Kolobok-IS4	463126	463719	90	-	.	.
scaffold99	subtractBed	intrn	463138	463443	.	-	.	Parent=CGI_10021208;
	scaffold99	WUBlastX	DNA_IS4EU	463138	463443	117	-	.	.
scaffold99	subtractBed	intrn	534847	535816	.	+	.	Parent=CGI_10021211;
	scaffold99	TRF	Tandem_Repeat	534847	535816	1730	+	.	.
scaffold99	subtractBed	intrn	544370	544399	.	+	.	Parent=CGI_10021211;
	scaffold99	TRF	Tandem_Repeat	544370	544399	51	+	.	.
scaffold99	subtractBed	intrn	544569	545383	.	+	.	Parent=CGI_10021211;
	scaffold99	TRF	Tandem_Repeat	544569	545383	1258	+	.	.
scaffold99	subtractBed	intrn	545560	546558	.	+	.	Parent=CGI_10021211;
	scaffold99	TRF	Tandem_Repeat	545560	546558	1414	+	.	.
scaffold99	subtractBed	intrn	603547	604840	.	+	.	Parent=CGI_10021214;
	scaffold99	TRF	Tandem_Repeat	603547	604840	1879	+	.	.
scaffold99	subtractBed	intrn	605415	605510	.	+	.	Parent=CGI_10021214;
	scaffold99	TRF	Tandem_Repeat	605415	605510	176	+	.	.
scaffold99	subtractBed	intrn	609725	609754	.	+	.	Parent=CGI_10021214;
	scaffold99	TRF	Tandem_Repeat	609725	609754	51	+	.	.
scaffold99	subtractBed	intrn	610600	610878	.	+	.	Parent=CGI_10021214;
	scaffold99	WUBlastX	LINE_L2	610600	610878	49	-	.	.
scaffold99	subtractBed	intrn	603547	604840	.	-	.	Parent=CGI_10021215;
	scaffold99	TRF	Tandem_Repeat	603547	604840	1879	+	.	.
scaffold99	subtractBed	intrn	605415	605510	.	-	.	Parent=CGI_10021215;
	scaffold99	TRF	Tandem_Repeat	605415	605510	176	+	.	.
scaffold99	subtractBed	intrn	609725	609754	.	-	.	Parent=CGI_10021215;
	scaffold99	TRF	Tandem_Repeat	609725	609754	51	+	.	.
scaffold99	subtractBed	intrn	610600	610878	.	-	.	Parent=CGI_10021215;
	scaffold99	WUBlastX	LINE_L2	610600	610878	49	-	.	.
scaffold99	subtractBed	intrn	628407	628471	.	+	.	Parent=CGI_10021217;
	scaffold99	TRF	Tandem_Repeat	628407	628471	51	+	.	.
scaffold992	subtractBed	intrn	17159	17212	.	+	.	Parent=CGI_10007502;
	scaffold992	TRF	Tandem_Repeat	17159	17212	99	+	.	.
scaffold992	subtractBed	intrn	32497	32706	.	-	.	Parent=CGI_10007504;
	scaffold992	WUBlastX	LINE_RTE-X	32497	32706	108	+	.	.
scaffold992	subtractBed	intrn	32455	32685	.	-	.	Parent=CGI_10007504;
	scaffold992	WUBlastX	LINE_RTE-X	32455	32685	65	+	.	.
scaffold992	subtractBed	intrn	32524	32829	.	-	.	Parent=CGI_10007504;
	scaffold992	WUBlastX	LINE_RTE-X	32524	32829	23	+	.	.
scaffold992	subtractBed	intrn	36575	36955	.	-	.	Parent=CGI_10007504;
	scaffold992	TRF	Tandem_Repeat	36575	36955	539	+	.	.
scaffold992	subtractBed	intrn	42157	42192	.	-	.	Parent=CGI_10007504;
	scaffold992	TRF	Tandem_Repeat	42157	42192	54	+	.	.
scaffold992	subtractBed	intrn	62439	62988	.	-	.	Parent=CGI_10007507;
	scaffold992	TRF	Tandem_Repeat	62439	63005	598	+	.	.
scaffold992	subtractBed	intrn	63166	63466	.	-	.	Parent=CGI_10007507;
	scaffold992	TRF	Tandem_Repeat	63166	63466	235	+	.	.
scaffold992	subtractBed	intrn	89186	89252	.	+	.	Parent=CGI_10007508;
	scaffold992	TRF	Tandem_Repeat	89186	89252	134	+	.	.
scaffold992	subtractBed	intrn	92862	93773	.	+	.	Parent=CGI_10007508;
	scaffold992	TRF	Tandem_Repeat	92862	93773	1161	+	.	.
scaffold992	subtractBed	intrn	93155	93773	.	+	.	Parent=CGI_10007508;
	scaffold992	TRF	Tandem_Repeat	93155	93773	981	+	.	.
scaffold992	subtractBed	intrn	93155	93773	.	+	.	Parent=CGI_10007508;
	scaffold992	TRF	Tandem_Repeat	93155	93773	990	+	.	.
scaffold992	subtractBed	intrn	115081	115108	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	115081	115108	56	+	.	.
scaffold992	subtractBed	intrn	115106	115130	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	115106	115130	50	+	.	.
scaffold992	subtractBed	intrn	116291	116421	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	116291	116421	129	+	.	.
scaffold992	subtractBed	intrn	116246	116385	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	116246	116385	128	+	.	.
scaffold992	subtractBed	intrn	125741	125971	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	125741	125971	270	+	.	.
scaffold992	subtractBed	intrn	125741	125971	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	125741	125971	331	+	.	.
scaffold992	subtractBed	intrn	126822	127047	.	-	.	Parent=CGI_10007510;
	scaffold992	TRF	Tandem_Repeat	126822	127047	193	+	.	.
scaffold992	subtractBed	intrn	156312	156343	.	+	.	Parent=CGI_10007514;
	scaffold992	TRF	Tandem_Repeat	156312	156343	55	+	.	.
scaffold993	subtractBed	intrn	112957	112983	.	+	.	Parent=CGI_10009373;
	scaffold993	TRF	Tandem_Repeat	112957	112983	54	+	.	.
scaffold993	subtractBed	intrn	132116	132158	.	+	.	Parent=CGI_10009374;
	scaffold993	TRF	Tandem_Repeat	132116	132158	56	+	.	.
scaffold993	subtractBed	intrn	169066	169095	.	+	.	Parent=CGI_10009377;
	scaffold993	TRF	Tandem_Repeat	169066	169095	51	+	.	.
scaffold993	subtractBed	intrn	211844	211874	.	+	.	Parent=CGI_10009379;
	scaffold993	TRF	Tandem_Repeat	211844	211874	62	+	.	.
scaffold993	subtractBed	intrn	218132	218184	.	+	.	Parent=CGI_10009380;
	scaffold993	TRF	Tandem_Repeat	218132	218184	106	+	.	.
scaffold998	subtractBed	intrn	6657	6926	.	+	.	Parent=CGI_10006458;
	scaffold998	TRF	Tandem_Repeat	6657	6926	285	+	.	.
scaffold998	subtractBed	intrn	7688	8149	.	+	.	Parent=CGI_10006458;
	scaffold998	TRF	Tandem_Repeat	7688	8149	453	+	.	.
scaffold998	subtractBed	intrn	8334	8738	.	+	.	Parent=CGI_10006458;
	scaffold998	TRF	Tandem_Repeat	8334	8738	463	+	.	.
scaffold998	subtractBed	intrn	46907	46999	.	+	.	Parent=CGI_10006460;
	scaffold998	TRF	Tandem_Repeat	46907	46999	117	+	.	.
scaffold998	subtractBed	intrn	50460	50504	.	+	.	Parent=CGI_10006460;
	scaffold998	WUBlastX	LINE_RTE-BovB	50460	50504	34	+	.	.
scaffold998	subtractBed	intrn	50500	50601	.	+	.	Parent=CGI_10006460;
	scaffold998	WUBlastX	LINE_RTE-BovB	50500	50601	87	+	.	.
scaffold998	subtractBed	intrn	78274	78315	.	+	.	Parent=CGI_10006462;
	scaffold998	TRF	Tandem_Repeat	78274	78315	68	+	.	.
scaffold998	subtractBed	intrn	79147	79217	.	+	.	Parent=CGI_10006462;
	scaffold998	TRF	Tandem_Repeat	79147	79217	142	+	.	.
scaffold998	subtractBed	intrn	80321	80437	.	+	.	Parent=CGI_10006462;
	scaffold998	TRF	Tandem_Repeat	80321	80437	74	+	.	.
scaffold998	subtractBed	intrn	92516	92559	.	-	.	Parent=CGI_10006464;
	scaffold998	TRF	Tandem_Repeat	92516	92559	70	+	.	.
scaffold998	subtractBed	intrn	102797	102828	.	-	.	Parent=CGI_10006464;
	scaffold998	TRF	Tandem_Repeat	102797	102828	64	+	.	.
scaffold998	subtractBed	intrn	103109	103153	.	-	.	Parent=CGI_10006464;
	scaffold998	TRF	Tandem_Repeat	103109	103153	90	+	.	.
scaffold998	subtractBed	intrn	123552	123821	.	-	.	Parent=CGI_10006465;
	scaffold998	WUBlastX	LINE_L2	123552	123821	62	+	.	.
scaffold998	subtractBed	intrn	127657	128046	.	-	.	Parent=CGI_10006465;
	scaffold998	WUBlastX	LINE_L2	127657	128046	25	+	.	.
scaffold998	subtractBed	intrn	125880	126593	.	-	.	Parent=CGI_10006465;
	scaffold998	WUBlastX	LINE_L1-Tx1	125880	126593	71	+	.	.
scaffold998	subtractBed	intrn	126571	127287	.	-	.	Parent=CGI_10006465;
	scaffold998	WUBlastX	LINE_L1-Tx1	126571	127287	140	+	.	.
scaffold999	subtractBed	intrn	48131	48161	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	48131	48161	53	+	.	.
scaffold999	subtractBed	intrn	49124	49149	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	49124	49149	52	+	.	.
scaffold999	subtractBed	intrn	55958	56395	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	55958	56395	120	+	.	.
scaffold999	subtractBed	intrn	55950	56397	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	55950	56397	130	+	.	.
scaffold999	subtractBed	intrn	56008	56119	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	56008	56119	75	+	.	.
scaffold999	subtractBed	intrn	55958	56349	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	55958	56349	86	+	.	.
scaffold999	subtractBed	intrn	56196	56397	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	56196	56397	291	+	.	.
scaffold999	subtractBed	intrn	56181	56395	.	-	.	Parent=CGI_10006971;
	scaffold999	TRF	Tandem_Repeat	56181	56395	92	+	.	.
scaffold999	subtractBed	intrn	89084	89118	.	-	.	Parent=CGI_10006972;
	scaffold999	TRF	Tandem_Repeat	89084	89118	61	+	.	.
scaffold999	subtractBed	intrn	89088	89129	.	-	.	Parent=CGI_10006972;
	scaffold999	TRF	Tandem_Repeat	89088	89129	57	+	.	.
scaffold999	subtractBed	intrn	95259	95356	.	-	.	Parent=CGI_10006972;
	scaffold999	TRF	Tandem_Repeat	95259	95356	178	+	.	.
scaffold999	subtractBed	intrn	98584	98802	.	-	.	Parent=CGI_10006972;
	scaffold999	TRF	Tandem_Repeat	98584	98802	54	+	.	.
scaffold999	subtractBed	intrn	99507	99570	.	-	.	Parent=CGI_10006972;
	scaffold999	TRF	Tandem_Repeat	99507	99570	128	+	.	.
scaffold999	subtractBed	intrn	112611	112662	.	+	.	Parent=CGI_10006973;
	scaffold999	TRF	Tandem_Repeat	112611	112662	104	+	.	.