CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 56532 640533 8.11 697065 2 121106 754678 13.83 875784 3 99965 519462 16.14 619427 4 93297 680274 12.06 773571 5 104366 655419 13.74 759785 6 115427 736790 13.54 852217 7 109241 652527 14.34 761768 8 103816 631112 14.13 734928 9 100864 634105 13.72 734969 10 98989 616177 13.84 715166 11 97045 633960 13.28 731005 12 96680 610887 13.66 707567 13 97016 612742 13.67 709758 14 98248 616287 13.75 714535 15 97845 619432 13.64 717277 16 96880 616579 13.58 713459 17 98589 625443 13.62 724032 18 100352 633427 13.68 733779 19 100457 628845 13.77 729302 20 101232 631701 13.81 732933 21 100317 629017 13.75 729334 22 100400 629054 13.76 729454 23 101773 629716 13.91 731489 24 101754 633231 13.84 734985 25 100420 625168 13.84 725588 26 100996 623950 13.93 724946 27 101725 625776 13.98 727501 28 100625 627269 13.82 727894 29 101255 631190 13.82 732445 30 101732 630729 13.89 732461 31 101373 632015 13.82 733388 32 101188 633973 13.76 735161 33 101913 634494 13.84 736407 34 101215 632200 13.80 733415 35 101407 632534 13.82 733941 36 101546 632942 13.83 734488 37 100770 630065 13.79 730835 38 101976 631442 13.90 733418 39 100962 633840 13.74 734802 40 101329 633401 13.79 734730 41 101806 634682 13.82 736488 42 102358 637316 13.84 739674 43 101542 637126 13.75 738668 44 101666 633748 13.82 735414 45 101864 634702 13.83 736566 46 101005 632131 13.78 733136 47 101825 634605 13.83 736430 48 102370 635238 13.88 737608 49 101014 633466 13.75 734480 50 102460 635920 13.88 738380 51 102018 635124 13.84 737142 52 101749 633396 13.84 735145 53 102439 636577 13.86 739016 54 102212 636202 13.84 738414 55 102233 634244 13.88 736477 56 102957 633323 13.98 736280 57 102099 634456 13.86 736555 58 101779 631138 13.89 732917 59 101590 633896 13.81 735486 60 101858 633798 13.85 735656 61 101839 633281 13.85 735120 62 101565 635971 13.77 737536 63 102094 635562 13.84 737656 64 102132 636812 13.82 738944 65 102611 635843 13.90 738454 66 101656 633503 13.83 735159 67 102058 633315 13.88 735373 68 102456 634481 13.90 736937 69 102417 633336 13.92 735753 70 101434 631588 13.84 733022 71 102631 635043 13.91 737674 72 102796 636156 13.91 738952 73 102524 633943 13.92 736467 74 102624 635859 13.90 738483 75 102761 633660 13.95 736421 76 102285 634119 13.89 736404 77 103330 635768 13.98 739098 78 102586 632668 13.95 735254 79 101719 633710 13.83 735429 80 102833 634653 13.94 737486 81 102046 634063 13.86 736109 82 102471 634629 13.90 737100 83 102621 637213 13.87 739834 84 102779 636121 13.91 738900 85 102685 634950 13.92 737635 86 102206 635879 13.85 738085 87 102182 632495 13.91 734677 88 102057 632451 13.89 734508 89 102147 629952 13.95 732099 90 102318 631852 13.94 734170 91 101759 631772 13.87 733531 92 102521 631267 13.97 733788 93 102427 631946 13.95 734373 94 102037 632656 13.89 734693 95 103143 633730 14.00 736873 96 102897 634034 13.96 736931 97 102158 633580 13.89 735738 98 102832 632207 13.99 735039 99 102500 632634 13.94 735134 100 102187 631573 13.93 733760 101 102263 631311 13.94 733574 102 102514 629594 14.00 732108 103 101941 630330 13.92 732271 104 102973 629786 14.05 732759 105 102104 632206 13.90 734310 106 102206 629995 13.96 732201 107 102534 631252 13.97 733786 108 102672 627742 14.06 730414 109 101796 627146 13.96 728942 110 101487 627319 13.93 728806 111 102547 628394 14.03 730941 112 101995 627260 13.99 729255 113 103100 628092 14.10 731192 114 102708 626182 14.09 728890 115 102532 625937 14.07 728469 116 102241 624293 14.07 726534 117 102065 625602 14.03 727667 118 102392 623110 14.11 725502 119 103075 623334 14.19 726409 120 103112 623164 14.20 726276 121 102944 620474 14.23 723418 122 103119 618949 14.28 722068 123 102762 619341 14.23 722103 124 103050 619152 14.27 722202 125 103654 619418 14.34 723072 126 104004 617291 14.42 721295 127 104182 614230 14.50 718412 128 104947 612888 14.62 717835 129 104279 613138 14.54 717417 130 104670 609888 14.65 714558 131 105194 612003 14.67 717197 132 104796 609533 14.67 714329 133 105935 608957 14.82 714892 134 106548 606510 14.94 713058 135 105673 604639 14.88 710312 136 106228 603234 14.97 709462 137 106641 602256 15.04 708897 138 107261 599019 15.19 706280 139 107047 597631 15.19 704678 140 108463 597251 15.37 705714 141 107596 593561 15.35 701157 142 108714 591074 15.54 699788 143 110283 590499 15.74 700782 144 110915 589243 15.84 700158 145 114322 588302 16.27 702624 146 120283 591943 16.89 712226 147 124341 592390 17.35 716731 148 126979 591297 17.68 718276 149 127892 591044 17.79 718936 150 140285 602812 18.88 743097 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 17071 1286320 1.31 1303391 2 15121 972768 1.53 987889 3 12301 829416 1.46 841717 4 11982 1000310 1.18 1012292 5 13327 1082013 1.22 1095340 6 14030 1046254 1.32 1060284 7 13241 942725 1.39 955966 8 12995 949395 1.35 962390 9 12644 944717 1.32 957361 10 12707 950662 1.32 963369 11 13198 968906 1.34 982104 12 12998 962236 1.33 975234 13 13035 958249 1.34 971284 14 13326 959323 1.37 972649 15 13051 958048 1.34 971099 16 13778 967189 1.40 980967 17 14032 975346 1.42 989378 18 14398 975510 1.45 989908 19 14091 974171 1.43 988262 20 14251 972150 1.44 986401 21 14512 976107 1.46 990619 22 14416 977154 1.45 991570 23 14567 972493 1.48 987060 24 14722 968007 1.50 982729 25 14657 965999 1.49 980656 26 15055 965646 1.54 980701 27 15117 973613 1.53 988730 28 15514 974825 1.57 990339 29 15085 975654 1.52 990739 30 15457 977543 1.56 993000 31 15452 982087 1.55 997539 32 15485 978788 1.56 994273 33 15604 982646 1.56 998250 34 15331 979736 1.54 995067 35 15658 976677 1.58 992335 36 15602 981038 1.57 996640 37 15723 981079 1.58 996802 38 15546 980478 1.56 996024 39 15537 982926 1.56 998463 40 15305 983564 1.53 998869 41 15725 983293 1.57 999018 42 15786 988746 1.57 1004532 43 15736 984309 1.57 1000045 44 16046 982938 1.61 998984 45 15796 982563 1.58 998359 46 15747 980893 1.58 996640 47 15788 982498 1.58 998286 48 15893 981237 1.59 997130 49 15836 982697 1.59 998533 50 15820 980131 1.59 995951 51 15824 982556 1.58 998380 52 15783 984993 1.58 1000776 53 15901 982125 1.59 998026 54 15801 984648 1.58 1000449 55 15904 982477 1.59 998381 56 16758 977878 1.68 994636 57 16023 979671 1.61 995694 58 16208 980282 1.63 996490 59 16007 980187 1.61 996194 60 15993 985628 1.60 1001621 61 16069 988964 1.60 1005033 62 16349 981904 1.64 998253 63 16259 987918 1.62 1004177 64 16282 986165 1.62 1002447 65 16221 981410 1.63 997631 66 16138 981010 1.62 997148 67 16121 983264 1.61 999385 68 15945 981999 1.60 997944 69 16414 983690 1.64 1000104 70 16531 984676 1.65 1001207 71 16202 982707 1.62 998909 72 16336 984512 1.63 1000848 73 16265 984441 1.63 1000706 74 16360 985369 1.63 1001729 75 16778 985073 1.67 1001851 76 16270 986477 1.62 1002747 77 16037 981090 1.61 997127 78 16602 982060 1.66 998662 79 16099 983662 1.61 999761 80 16234 979754 1.63 995988 81 16058 982072 1.61 998130 82 16111 984324 1.61 1000435 83 16095 979419 1.62 995514 84 16299 984902 1.63 1001201 85 16108 984363 1.61 1000471 86 16137 981925 1.62 998062 87 16403 979779 1.65 996182 88 16158 977498 1.63 993656 89 16157 974519 1.63 990676 90 16255 979928 1.63 996183 91 16121 981518 1.62 997639 92 16310 977193 1.64 993503 93 16034 980925 1.61 996959 94 16394 982896 1.64 999290 95 16365 978866 1.64 995231 96 16117 980977 1.62 997094 97 16204 977890 1.63 994094 98 16567 975784 1.67 992351 99 16298 978442 1.64 994740 100 16639 976285 1.68 992924 101 16426 974982 1.66 991408 102 16639 978192 1.67 994831 103 16580 977378 1.67 993958 104 16729 973912 1.69 990641 105 16656 974377 1.68 991033 106 17078 980461 1.71 997539 107 17116 973762 1.73 990878 108 17415 976272 1.75 993687 109 17221 975403 1.73 992624 110 17505 972896 1.77 990401 111 17904 973486 1.81 991390 112 17787 974575 1.79 992362 113 17925 968564 1.82 986489 114 18030 970306 1.82 988336 115 18206 966550 1.85 984756 116 18619 965827 1.89 984446 117 18531 967711 1.88 986242 118 18967 968171 1.92 987138 119 18988 964560 1.93 983548 120 19292 964446 1.96 983738 121 19781 961943 2.01 981724 122 20213 959277 2.06 979490 123 20543 961342 2.09 981885 124 20853 960265 2.13 981118 125 21244 957592 2.17 978836 126 21982 955995 2.25 977977 127 22193 952998 2.28 975191 128 22750 947503 2.34 970253 129 23053 950213 2.37 973266 130 23819 944797 2.46 968616 131 23779 941093 2.46 964872 132 24999 941503 2.59 966502 133 25679 938556 2.66 964235 134 26084 937147 2.71 963231 135 26855 932879 2.80 959734 136 27176 929481 2.84 956657 137 28188 924809 2.96 952997 138 28831 923318 3.03 952149 139 30343 923424 3.18 953767 140 31646 918868 3.33 950514 141 33219 917218 3.50 950437 142 34407 914204 3.63 948611 143 35620 909311 3.77 944931 144 39271 910648 4.13 949919 145 46416 914955 4.83 961371 146 56297 914853 5.80 971150 147 61899 915995 6.33 977894 148 68832 915038 7.00 983870 149 79129 926858 7.87 1005987 150 78954 919500 7.91 998454 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 53902 4068712 1.31 4122614 2 74395 3659122 1.99 3733517 3 58046 3202655 1.78 3260701 4 58817 3938459 1.47 3997276 5 64120 4054947 1.56 4119067 6 67532 4083948 1.63 4151480 7 67004 3814447 1.73 3881451 8 65756 3935246 1.64 4001002 9 66217 4057932 1.61 4124149 10 65374 4063295 1.58 4128669 11 67146 4193429 1.58 4260575 12 67730 4169015 1.60 4236745 13 67095 4149418 1.59 4216513 14 67789 4171284 1.60 4239073 15 69843 4150733 1.65 4220576 16 71185 4137159 1.69 4208344 17 71839 4159591 1.70 4231430 18 72859 4178900 1.71 4251759 19 73815 4158009 1.74 4231824 20 74037 4166307 1.75 4240344 21 74295 4172485 1.75 4246780 22 74174 4146461 1.76 4220635 23 74069 4130673 1.76 4204742 24 75800 4143186 1.80 4218986 25 75539 4134315 1.79 4209854 26 76775 4138210 1.82 4214985 27 77754 4153130 1.84 4230884 28 79364 4136692 1.88 4216056 29 77897 4154466 1.84 4232363 30 78155 4167911 1.84 4246066 31 79027 4161683 1.86 4240710 32 78854 4156136 1.86 4234990 33 79858 4154847 1.89 4234705 34 79098 4141253 1.87 4220351 35 79544 4147537 1.88 4227081 36 80164 4167454 1.89 4247618 37 79623 4153640 1.88 4233263 38 80113 4155865 1.89 4235978 39 80652 4166303 1.90 4246955 40 80569 4160456 1.90 4241025 41 80421 4161649 1.90 4242070 42 80718 4161384 1.90 4242102 43 81748 4151257 1.93 4233005 44 81637 4151089 1.93 4232726 45 81544 4159910 1.92 4241454 46 81380 4154889 1.92 4236269 47 81729 4153770 1.93 4235499 48 81928 4162576 1.93 4244504 49 82053 4154727 1.94 4236780 50 81527 4162177 1.92 4243704 51 82291 4176060 1.93 4258351 52 82594 4169117 1.94 4251711 53 82717 4168927 1.95 4251644 54 82695 4172009 1.94 4254704 55 83015 4172732 1.95 4255747 56 87087 4163481 2.05 4250568 57 82996 4181291 1.95 4264287 58 83620 4179066 1.96 4262686 59 83217 4173120 1.96 4256337 60 83866 4180922 1.97 4264788 61 83410 4166364 1.96 4249774 62 83298 4173871 1.96 4257169 63 83960 4172110 1.97 4256070 64 83589 4163759 1.97 4247348 65 83620 4160703 1.97 4244323 66 84019 4163691 1.98 4247710 67 84577 4158162 1.99 4242739 68 84391 4175115 1.98 4259506 69 84257 4180812 1.98 4265069 70 84308 4180616 1.98 4264924 71 84171 4177835 1.97 4262006 72 84004 4176940 1.97 4260944 73 84123 4169926 1.98 4254049 74 84321 4175078 1.98 4259399 75 87195 4166573 2.05 4253768 76 83919 4173052 1.97 4256971 77 83695 4169717 1.97 4253412 78 85657 4172815 2.01 4258472 79 83847 4164529 1.97 4248376 80 83842 4167376 1.97 4251218 81 83612 4175632 1.96 4259244 82 83369 4165867 1.96 4249236 83 84741 4168539 1.99 4253280 84 85010 4177725 1.99 4262735 85 84507 4162958 1.99 4247465 86 83727 4170202 1.97 4253929 87 84243 4170257 1.98 4254500 88 84039 4168627 1.98 4252666 89 84727 4176338 1.99 4261065 90 84196 4174895 1.98 4259091 91 84853 4168132 2.00 4252985 92 84497 4165650 1.99 4250147 93 84623 4169097 1.99 4253720 94 84177 4165081 1.98 4249258 95 84663 4165047 1.99 4249710 96 85293 4172941 2.00 4258234 97 85714 4160355 2.02 4246069 98 84915 4162129 2.00 4247044 99 86639 4174082 2.03 4260721 100 86657 4172386 2.03 4259043 101 87109 4177493 2.04 4264602 102 87667 4181721 2.05 4269388 103 87954 4166869 2.07 4254823 104 89363 4163127 2.10 4252490 105 89420 4167854 2.10 4257274 106 89159 4166070 2.10 4255229 107 89692 4162108 2.11 4251800 108 90727 4165387 2.13 4256114 109 91762 4159489 2.16 4251251 110 92144 4159576 2.17 4251720 111 92706 4157866 2.18 4250572 112 93662 4152236 2.21 4245898 113 94868 4142667 2.24 4237535 114 95830 4144351 2.26 4240181 115 97141 4136204 2.29 4233345 116 97047 4135623 2.29 4232670 117 99397 4140610 2.34 4240007 118 100101 4125343 2.37 4225444 119 101181 4118109 2.40 4219290 120 102887 4118298 2.44 4221185 121 103804 4111399 2.46 4215203 122 106517 4109299 2.53 4215816 123 107877 4112512 2.56 4220389 124 109974 4098094 2.61 4208068 125 111142 4093794 2.64 4204936 126 113829 4084715 2.71 4198544 127 116056 4068630 2.77 4184686 128 118113 4063320 2.82 4181433 129 120376 4054440 2.88 4174816 130 124466 4046928 2.98 4171394 131 125172 4044015 3.00 4169187 132 128873 4035185 3.09 4164058 133 130757 4020653 3.15 4151410 134 133743 4011589 3.23 4145332 135 137880 3998841 3.33 4136721 136 141966 3986988 3.44 4128954 137 145717 3976093 3.54 4121810 138 149840 3969447 3.64 4119287 139 154868 3956094 3.77 4110962 140 159564 3947039 3.89 4106603 141 165645 3929845 4.04 4095490 142 168898 3921059 4.13 4089957 143 176520 3913849 4.32 4090369 144 189683 3923584 4.61 4113267 145 213631 3930429 5.16 4144060 146 237861 3932410 5.70 4170271 147 266492 3935532 6.34 4202024 148 283791 3926385 6.74 4210176 149 299784 3906140 7.13 4205924 150 307772 3900425 7.31 4208197 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1441831 272112 84.12 1713943 2 425497 90297 82.49 515794 3 356705 134141 72.67 490846 4 401000 214137 65.19 615137 5 280558 246478 53.23 527036 6 229792 276509 45.39 506301 7 183266 321032 36.34 504298 8 161321 373840 30.14 535161 9 140669 422203 24.99 562872 10 125732 465081 21.28 590813 11 110611 495139 18.26 605750 12 101224 508751 16.59 609975 13 94158 513325 15.50 607483 14 88931 520091 14.60 609022 15 85518 521350 14.09 606868 16 84323 523283 13.88 607606 17 84053 522327 13.86 606380 18 84079 520477 13.91 604556 19 83432 521356 13.80 604788 20 84085 519596 13.93 603681 21 83822 519298 13.90 603120 22 83879 515571 13.99 599450 23 84002 514374 14.04 598376 24 82418 510884 13.89 593302 25 81558 508583 13.82 590141 26 81253 506379 13.83 587632 27 80983 503536 13.85 584519 28 80941 499412 13.95 580353 29 79980 495983 13.89 575963 30 79939 493865 13.93 573804 31 78710 491318 13.81 570028 32 78774 486184 13.94 564958 33 77864 483404 13.87 561268 34 77060 479144 13.85 556204 35 76155 475750 13.80 551905 36 76025 471977 13.87 548002 37 75119 468213 13.83 543332 38 74773 463954 13.88 538727 39 74074 459298 13.89 533372 40 73247 455780 13.85 529027 41 72878 452673 13.87 525551 42 72199 448631 13.86 520830 43 71729 445082 13.88 516811 44 71109 441197 13.88 512306 45 70549 437808 13.88 508357 46 69450 432593 13.83 502043 47 69361 428524 13.93 497885 48 68706 425958 13.89 494664 49 67819 422495 13.83 490314 50 66859 418701 13.77 485560 51 66787 414101 13.89 480888 52 65767 411324 13.79 477091 53 65950 406755 13.95 472705 54 64417 403395 13.77 467812 55 64408 399046 13.90 463454 56 63752 395969 13.87 459721 57 62666 391411 13.80 454077 58 62439 387822 13.87 450261 59 61990 383805 13.91 445795 60 61066 380473 13.83 441539 61 60495 376475 13.84 436970 62 60409 373354 13.93 433763 63 59409 369067 13.87 428476 64 58493 366201 13.77 424694 65 57969 361039 13.83 419008 66 57887 358930 13.89 416817 67 57261 355101 13.89 412362 68 56731 352400 13.87 409131 69 55892 347588 13.85 403480 70 55455 343268 13.91 398723 71 54982 340520 13.90 395502 72 54264 338013 13.83 392277 73 53166 334451 13.72 387617 74 53149 330870 13.84 384019 75 53015 327607 13.93 380622 76 52328 324473 13.89 376801 77 51550 319936 13.88 371486 78 51131 316756 13.90 367887 79 50777 311820 14.00 362597 80 50018 310434 13.88 360452 81 49563 306614 13.92 356177 82 48836 304138 13.84 352974 83 47705 299538 13.74 347243 84 47410 296800 13.77 344210 85 47565 294106 13.92 341671 86 46789 289370 13.92 336159 87 46465 286811 13.94 333276 88 45849 282888 13.95 328737 89 45847 281841 13.99 327688 90 44618 277736 13.84 322354 91 44416 274794 13.91 319210 92 44057 272747 13.91 316804 93 43259 269437 13.83 312696 94 42843 264948 13.92 307791 95 42680 262252 14.00 304932 96 41745 259139 13.87 300884 97 41597 257314 13.92 298911 98 41121 253999 13.93 295120 99 40790 251231 13.97 292021 100 40643 247924 14.08 288567 101 39846 246831 13.90 286677 102 39227 242926 13.90 282153 103 38585 240073 13.85 278658 104 38168 238041 13.82 276209 105 38188 234992 13.98 273180 106 37287 231954 13.85 269241 107 37335 229769 13.98 267104 108 36714 226444 13.95 263158 109 36146 223219 13.94 259365 110 36066 222266 13.96 258332 111 35684 219556 13.98 255240 112 35063 216291 13.95 251354 113 34402 213859 13.86 248261 114 34473 211989 13.99 246462 115 33955 209513 13.95 243468 116 33371 205986 13.94 239357 117 33222 203875 14.01 237097 118 32693 201443 13.96 234136 119 32212 199141 13.92 231353 120 32065 196276 14.04 228341 121 31467 194446 13.93 225913 122 31142 191726 13.97 222868 123 30828 190258 13.94 221086 124 30414 188588 13.89 219002 125 30128 185545 13.97 215673 126 29998 184008 14.02 214006 127 29351 180419 13.99 209770 128 29037 179218 13.94 208255 129 28946 176813 14.07 205759 130 28212 174585 13.91 202797 131 27727 173130 13.80 200857 132 27651 169856 14.00 197507 133 27533 168182 14.07 195715 134 26828 165979 13.91 192807 135 26653 164071 13.97 190724 136 26024 162214 13.83 188238 137 26037 160650 13.95 186687 138 25576 157966 13.93 183542 139 25358 156193 13.97 181551 140 24999 154152 13.95 179151 141 24602 151793 13.95 176395 142 24332 150576 13.91 174908 143 23811 148642 13.81 172453 144 23792 146818 13.95 170610 145 23601 144526 14.04 168127 146 23125 143204 13.90 166329 147 22986 141869 13.94 164855 148 23055 140158 14.13 163213 149 22581 138911 13.98 161492 150 22264 136811 14.00 159075 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1706717 322907 84.09 2029624 2 1579421 366732 81.16 1946153 3 410010 144084 74.00 554094 4 415032 224992 64.85 640024 5 355065 339244 51.14 694309 6 255994 353002 42.04 608996 7 203191 390014 34.25 593205 8 149889 469192 24.21 619081 9 114845 556129 17.12 670974 10 84730 644675 11.62 729405 11 62953 723476 8.00 786429 12 45127 757771 5.62 802898 13 34102 776646 4.21 810748 14 25233 788859 3.10 814092 15 19893 802918 2.42 822811 16 16802 807400 2.04 824202 17 15046 807458 1.83 822504 18 13333 807380 1.62 820713 19 12863 804344 1.57 817207 20 12450 801954 1.53 814404 21 12204 797684 1.51 809888 22 12331 796402 1.52 808733 23 11964 790888 1.49 802852 24 11691 787176 1.46 798867 25 11363 782225 1.43 793588 26 11493 777242 1.46 788735 27 11226 773303 1.43 784529 28 11873 770073 1.52 781946 29 11320 764517 1.46 775837 30 11096 759994 1.44 771090 31 10965 755318 1.43 766283 32 11016 749445 1.45 760461 33 11040 744240 1.46 755280 34 10853 738437 1.45 749290 35 10705 731972 1.44 742677 36 10721 725658 1.46 736379 37 10616 718511 1.46 729127 38 10653 716456 1.47 727109 39 10690 711615 1.48 722305 40 10239 705596 1.43 715835 41 10497 700110 1.48 710607 42 10363 693798 1.47 704161 43 10134 688392 1.45 698526 44 10098 680895 1.46 690993 45 10138 676207 1.48 686345 46 10122 669186 1.49 679308 47 9753 664453 1.45 674206 48 9822 660120 1.47 669942 49 9917 652116 1.50 662033 50 9942 647842 1.51 657784 51 9502 641090 1.46 650592 52 9848 635319 1.53 645167 53 9616 629265 1.51 638881 54 9478 622463 1.50 631941 55 9492 617350 1.51 626842 56 9151 611140 1.48 620291 57 9326 605896 1.52 615222 58 9256 599936 1.52 609192 59 9076 593589 1.51 602665 60 9199 588953 1.54 598152 61 9222 580446 1.56 589668 62 9084 576490 1.55 585574 63 8948 571797 1.54 580745 64 8703 566109 1.51 574812 65 8623 561851 1.51 570474 66 8673 556291 1.54 564964 67 8637 549085 1.55 557722 68 8615 542525 1.56 551140 69 8293 539061 1.52 547354 70 8416 532714 1.56 541130 71 8245 526136 1.54 534381 72 8298 521971 1.56 530269 73 8122 516954 1.55 525076 74 8088 511969 1.56 520057 75 8199 505226 1.60 513425 76 8052 501444 1.58 509496 77 7723 495164 1.54 502887 78 7939 490874 1.59 498813 79 8126 483535 1.65 491661 80 7692 480232 1.58 487924 81 7815 476296 1.61 484111 82 7598 469249 1.59 476847 83 7589 464899 1.61 472488 84 7519 461810 1.60 469329 85 7385 456002 1.59 463387 86 7561 450391 1.65 457952 87 7348 444133 1.63 451481 88 7667 439646 1.71 447313 89 7232 435143 1.63 442375 90 7206 430176 1.65 437382 91 7155 426436 1.65 433591 92 7234 420991 1.69 428225 93 7204 417244 1.70 424448 94 7164 411445 1.71 418609 95 7035 406868 1.70 413903 96 6982 402918 1.70 409900 97 6715 398495 1.66 405210 98 6850 394430 1.71 401280 99 6689 389241 1.69 395930 100 6674 385320 1.70 391994 101 6646 380441 1.72 387087 102 6559 376926 1.71 383485 103 6484 373205 1.71 379689 104 6449 367918 1.72 374367 105 6611 363388 1.79 369999 106 6418 359105 1.76 365523 107 6502 354374 1.80 360876 108 6263 351583 1.75 357846 109 6354 346255 1.80 352609 110 6143 343119 1.76 349262 111 6063 338599 1.76 344662 112 5960 335511 1.75 341471 113 5948 330823 1.77 336771 114 6160 328038 1.84 334198 115 5918 322863 1.80 328781 116 5939 320128 1.82 326067 117 5758 315126 1.79 320884 118 5710 311526 1.80 317236 119 5594 307728 1.79 313322 120 5580 305458 1.79 311038 121 5518 300931 1.80 306449 122 5519 297388 1.82 302907 123 5344 293700 1.79 299044 124 5444 289613 1.85 295057 125 5369 288280 1.83 293649 126 5068 283458 1.76 288526 127 5436 279868 1.91 285304 128 5278 275762 1.88 281040 129 5118 274154 1.83 279272 130 4924 269632 1.79 274556 131 5062 266600 1.86 271662 132 5014 263672 1.87 268686 133 4968 259866 1.88 264834 134 4968 257292 1.89 262260 135 4904 254060 1.89 258964 136 4804 250498 1.88 255302 137 4793 247634 1.90 252427 138 4948 243734 1.99 248682 139 4757 241821 1.93 246578 140 4676 238337 1.92 243013 141 4642 234969 1.94 239611 142 4645 232418 1.96 237063 143 4652 228526 2.00 233178 144 4548 227655 1.96 232203 145 4503 224672 1.96 229175 146 4491 220797 1.99 225288 147 4611 218317 2.07 222928 148 4512 215627 2.05 220139 149 4397 213804 2.02 218201 150 4444 211669 2.06 216113 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4807240 905825 84.14 5713065 2 4056131 923121 81.46 4979252 3 3821775 1522852 71.51 5344627 4 3172901 1817517 63.58 4990418 5 2181692 2100218 50.95 4281910 6 1710994 2270485 42.97 3981479 7 1297015 2351776 35.55 3648791 8 982148 2452544 28.59 3434692 9 723120 2584499 21.86 3307619 10 525632 2732278 16.13 3257910 11 374145 2965717 11.20 3339862 12 263037 3096606 7.83 3359643 13 191474 3184842 5.67 3376316 14 138709 3264533 4.08 3403242 15 106763 3328276 3.11 3435039 16 87485 3379823 2.52 3467308 17 75731 3413343 2.17 3489074 18 68893 3430806 1.97 3499699 19 63979 3440283 1.83 3504262 20 61952 3432063 1.77 3494015 21 60207 3425096 1.73 3485303 22 59784 3412892 1.72 3472676 23 59054 3391585 1.71 3450639 24 59215 3366723 1.73 3425938 25 57618 3346638 1.69 3404256 26 57714 3322679 1.71 3380393 27 56550 3301561 1.68 3358111 28 57262 3275885 1.72 3333147 29 57415 3252472 1.73 3309887 30 56105 3229748 1.71 3285853 31 56390 3205013 1.73 3261403 32 55080 3185787 1.70 3240867 33 54791 3162600 1.70 3217391 34 53568 3138237 1.68 3191805 35 53777 3112404 1.70 3166181 36 54796 3086188 1.74 3140984 37 53786 3065137 1.72 3118923 38 53602 3039732 1.73 3093334 39 52985 3013149 1.73 3066134 40 51995 2993700 1.71 3045695 41 52175 2967141 1.73 3019316 42 51956 2941361 1.74 2993317 43 50644 2921850 1.70 2972494 44 51142 2894046 1.74 2945188 45 50710 2872622 1.73 2923332 46 50721 2847664 1.75 2898385 47 49774 2825211 1.73 2874985 48 49273 2796434 1.73 2845707 49 49623 2772917 1.76 2822540 50 49607 2747087 1.77 2796694 51 48317 2724212 1.74 2772529 52 48589 2698480 1.77 2747069 53 48266 2674735 1.77 2723001 54 47495 2649820 1.76 2697315 55 47958 2625476 1.79 2673434 56 47739 2600114 1.80 2647853 57 47425 2577025 1.81 2624450 58 46807 2550909 1.80 2597716 59 46550 2529103 1.81 2575653 60 46030 2505589 1.80 2551619 61 46492 2478259 1.84 2524751 62 45487 2453386 1.82 2498873 63 44526 2432872 1.80 2477398 64 44522 2408274 1.82 2452796 65 44521 2387164 1.83 2431685 66 44084 2364798 1.83 2408882 67 43077 2340671 1.81 2383748 68 44076 2317408 1.87 2361484 69 42472 2295000 1.82 2337472 70 42588 2269780 1.84 2312368 71 42254 2246482 1.85 2288736 72 42047 2222104 1.86 2264151 73 41555 2202869 1.85 2244424 74 41011 2179005 1.85 2220016 75 41100 2158570 1.87 2199670 76 40288 2133764 1.85 2174052 77 40380 2113799 1.87 2154179 78 40666 2089804 1.91 2130470 79 40425 2066508 1.92 2106933 80 39376 2048897 1.89 2088273 81 38952 2027462 1.89 2066414 82 39184 2001218 1.92 2040402 83 39107 1981558 1.94 2020665 84 38229 1963165 1.91 2001394 85 38213 1942470 1.93 1980683 86 38096 1921452 1.94 1959548 87 37484 1902414 1.93 1939898 88 38391 1876683 2.00 1915074 89 36650 1863898 1.93 1900548 90 36502 1840974 1.94 1877476 91 36187 1821879 1.95 1858066 92 36028 1800770 1.96 1836798 93 35389 1785361 1.94 1820750 94 35704 1761766 1.99 1797470 95 34885 1744775 1.96 1779660 96 34956 1724854 1.99 1759810 97 33654 1706578 1.93 1740232 98 34193 1686617 1.99 1720810 99 33671 1668686 1.98 1702357 100 33846 1648246 2.01 1682092 101 32890 1633275 1.97 1666165 102 33198 1616174 2.01 1649372 103 32037 1598119 1.97 1630156 104 32958 1578681 2.04 1611639 105 32761 1556532 2.06 1589293 106 32371 1541180 2.06 1573551 107 32173 1524322 2.07 1556495 108 31538 1507668 2.05 1539206 109 31455 1491311 2.07 1522766 110 31028 1473627 2.06 1504655 111 30909 1458321 2.08 1489230 112 29930 1443166 2.03 1473096 113 30317 1424972 2.08 1455289 114 30513 1406325 2.12 1436838 115 30037 1389593 2.12 1419630 116 28907 1374632 2.06 1403539 117 28885 1358495 2.08 1387380 118 28850 1343787 2.10 1372637 119 28449 1324641 2.10 1353090 120 28690 1310746 2.14 1339436 121 28505 1296679 2.15 1325184 122 27599 1283477 2.11 1311076 123 27425 1267511 2.12 1294936 124 27238 1252883 2.13 1280121 125 27047 1237166 2.14 1264213 126 25944 1224512 2.07 1250456 127 26835 1206133 2.18 1232968 128 25339 1193604 2.08 1218943 129 25736 1179141 2.14 1204877 130 25710 1166467 2.16 1192177 131 25187 1151317 2.14 1176504 132 24788 1135792 2.14 1160580 133 24654 1123884 2.15 1148538 134 25067 1108791 2.21 1133858 135 24917 1094737 2.23 1119654 136 24035 1082152 2.17 1106187 137 23943 1069217 2.19 1093160 138 24389 1052848 2.26 1077237 139 23758 1043836 2.23 1067594 140 23477 1029923 2.23 1053400 141 23554 1016869 2.26 1040423 142 23511 1003657 2.29 1027168 143 23065 991108 2.27 1014173 144 22714 978617 2.27 1001331 145 22081 967896 2.23 989977 146 22398 954735 2.29 977133 147 22523 941312 2.34 963835 148 22355 932419 2.34 954774 149 22171 924608 2.34 946779 150 21845 912712 2.34 934557