zr2096_2_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 14119992 lines in total Total number of methylation call strings processed: 28239984 Final Cytosine Methylation Report ================================= Total number of C's analysed: 217855622 Total methylated C's in CpG context: 20356245 Total methylated C's in CHG context: 1293967 Total methylated C's in CHH context: 8161912 Total C to T conversions in CpG context: 8346961 Total C to T conversions in CHG context: 46525869 Total C to T conversions in CHH context: 133170668 C methylated in CpG context: 70.9% C methylated in CHG context: 2.7% C methylated in CHH context: 5.8%