CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 66 49 57.39 115 2 75 33 69.44 108 3 92 50 64.79 142 4 64 43 59.81 107 5 67 35 65.69 102 6 75 31 70.75 106 7 97 38 71.85 135 8 69 45 60.53 114 9 72 29 71.29 101 10 84 32 72.41 116 11 73 42 63.48 115 12 94 30 75.81 124 13 86 29 74.78 115 14 83 38 68.60 121 15 97 42 69.78 139 16 74 38 66.07 112 17 82 41 66.67 123 18 86 48 64.18 134 19 69 40 63.30 109 20 86 38 69.35 124 21 85 37 69.67 122 22 81 41 66.39 122 23 73 31 70.19 104 24 81 30 72.97 111 25 87 44 66.41 131 26 80 40 66.67 120 27 85 33 72.03 118 28 82 46 64.06 128 29 83 36 69.75 119 30 79 42 65.29 121 31 76 31 71.03 107 32 84 38 68.85 122 33 81 33 71.05 114 34 73 37 66.36 110 35 91 35 72.22 126 36 82 36 69.49 118 37 87 35 71.31 122 38 93 38 70.99 131 39 85 29 74.56 114 40 86 32 72.88 118 41 91 28 76.47 119 42 75 28 72.82 103 43 77 34 69.37 111 44 86 43 66.67 129 45 59 33 64.13 92 46 77 39 66.38 116 47 75 40 65.22 115 48 72 33 68.57 105 49 86 34 71.67 120 50 68 28 70.83 96 51 72 35 67.29 107 52 76 32 70.37 108 53 85 21 80.19 106 54 78 26 75.00 104 55 86 45 65.65 131 56 71 36 66.36 107 57 57 32 64.04 89 58 76 34 69.09 110 59 53 30 63.86 83 60 69 33 67.65 102 61 68 20 77.27 88 62 63 33 65.62 96 63 67 24 73.63 91 64 65 28 69.89 93 65 55 26 67.90 81 66 63 24 72.41 87 67 57 29 66.28 86 68 62 12 83.78 74 69 56 26 68.29 82 70 66 35 65.35 101 71 66 20 76.74 86 72 47 33 58.75 80 73 43 17 71.67 60 74 36 22 62.07 58 75 39 28 58.21 67 76 46 24 65.71 70 77 48 25 65.75 73 78 48 19 71.64 67 79 43 18 70.49 61 80 12 8 60.00 20 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 13 191 6.37 204 2 9 190 4.52 199 3 10 170 5.56 180 4 9 167 5.11 176 5 1 172 0.58 173 6 8 188 4.08 196 7 4 188 2.08 192 8 4 185 2.12 189 9 4 179 2.19 183 10 3 190 1.55 193 11 4 198 1.98 202 12 6 155 3.73 161 13 9 202 4.27 211 14 4 188 2.08 192 15 9 223 3.88 232 16 8 183 4.19 191 17 8 177 4.32 185 18 9 208 4.15 217 19 6 185 3.14 191 20 4 163 2.40 167 21 6 195 2.99 201 22 3 209 1.42 212 23 3 216 1.37 219 24 5 187 2.60 192 25 4 216 1.82 220 26 3 174 1.69 177 27 7 229 2.97 236 28 8 209 3.69 217 29 2 191 1.04 193 30 4 184 2.13 188 31 8 190 4.04 198 32 6 192 3.03 198 33 6 209 2.79 215 34 5 202 2.42 207 35 4 209 1.88 213 36 4 197 1.99 201 37 4 201 1.95 205 38 3 175 1.69 178 39 4 189 2.07 193 40 3 187 1.58 190 41 4 185 2.12 189 42 6 198 2.94 204 43 6 180 3.23 186 44 3 183 1.61 186 45 4 197 1.99 201 46 5 201 2.43 206 47 5 185 2.63 190 48 4 190 2.06 194 49 2 179 1.10 181 50 3 180 1.64 183 51 5 187 2.60 192 52 5 171 2.84 176 53 6 191 3.05 197 54 3 170 1.73 173 55 2 154 1.28 156 56 3 182 1.62 185 57 5 163 2.98 168 58 5 167 2.91 172 59 3 156 1.89 159 60 2 140 1.41 142 61 4 160 2.44 164 62 5 164 2.96 169 63 4 152 2.56 156 64 5 122 3.94 127 65 2 129 1.53 131 66 3 132 2.22 135 67 2 143 1.38 145 68 7 135 4.93 142 69 1 146 0.68 147 70 4 121 3.20 125 71 1 143 0.69 144 72 5 153 3.16 158 73 2 134 1.47 136 74 2 116 1.69 118 75 2 108 1.82 110 76 4 140 2.78 144 77 1 85 1.16 86 78 4 92 4.17 96 79 8 91 8.08 99 80 1 52 1.89 53 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 46 663 6.49 709 2 52 628 7.65 680 3 51 672 7.05 723 4 38 613 5.84 651 5 38 575 6.20 613 6 34 608 5.30 642 7 41 562 6.80 603 8 40 574 6.51 614 9 37 584 5.96 621 10 47 578 7.52 625 11 38 593 6.02 631 12 41 571 6.70 612 13 37 567 6.13 604 14 40 573 6.53 613 15 46 566 7.52 612 16 33 591 5.29 624 17 29 636 4.36 665 18 40 568 6.58 608 19 35 620 5.34 655 20 31 554 5.30 585 21 36 617 5.51 653 22 30 630 4.55 660 23 39 629 5.84 668 24 29 543 5.07 572 25 28 612 4.38 640 26 34 589 5.46 623 27 27 605 4.27 632 28 31 622 4.75 653 29 25 619 3.88 644 30 30 575 4.96 605 31 25 647 3.72 672 32 27 607 4.26 634 33 21 621 3.27 642 34 29 597 4.63 626 35 21 564 3.59 585 36 16 580 2.68 596 37 15 608 2.41 623 38 23 630 3.52 653 39 26 633 3.95 659 40 23 600 3.69 623 41 27 585 4.41 612 42 14 595 2.30 609 43 26 635 3.93 661 44 15 617 2.37 632 45 18 614 2.85 632 46 17 549 3.00 566 47 19 598 3.08 617 48 23 588 3.76 611 49 13 586 2.17 599 50 19 527 3.48 546 51 14 571 2.39 585 52 23 568 3.89 591 53 18 533 3.27 551 54 14 518 2.63 532 55 23 471 4.66 494 56 16 515 3.01 531 57 18 502 3.46 520 58 17 533 3.09 550 59 16 500 3.10 516 60 18 496 3.50 514 61 12 483 2.42 495 62 14 485 2.81 499 63 14 476 2.86 490 64 13 458 2.76 471 65 12 487 2.40 499 66 11 434 2.47 445 67 14 433 3.13 447 68 7 463 1.49 470 69 16 419 3.68 435 70 10 372 2.62 382 71 12 418 2.79 430 72 9 396 2.22 405 73 15 399 3.62 414 74 5 406 1.22 411 75 8 393 2.00 401 76 11 368 2.90 379 77 10 341 2.85 351 78 14 312 4.29 326 79 8 255 3.04 263 80 3 129 2.27 132 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 45 39 53.57 84 2 47 27 63.51 74 3 28 18 60.87 46 4 34 24 58.62 58 5 36 21 63.16 57 6 34 16 68.00 50 7 41 24 63.08 65 8 41 14 74.55 55 9 21 20 51.22 41 10 30 21 58.82 51 11 43 15 74.14 58 12 32 16 66.67 48 13 26 17 60.47 43 14 40 17 70.18 57 15 29 13 69.05 42 16 37 18 67.27 55 17 34 11 75.56 45 18 29 12 70.73 41 19 28 16 63.64 44 20 33 12 73.33 45 21 25 16 60.98 41 22 34 15 69.39 49 23 27 10 72.97 37 24 32 19 62.75 51 25 30 11 73.17 41 26 32 14 69.57 46 27 25 16 60.98 41 28 25 16 60.98 41 29 28 16 63.64 44 30 20 11 64.52 31 31 22 12 64.71 34 32 26 11 70.27 37 33 23 11 67.65 34 34 18 17 51.43 35 35 19 9 67.86 28 36 25 4 86.21 29 37 19 14 57.58 33 38 16 10 61.54 26 39 20 9 68.97 29 40 19 13 59.38 32 41 13 10 56.52 23 42 26 11 70.27 37 43 18 9 66.67 27 44 12 11 52.17 23 45 19 5 79.17 24 46 14 13 51.85 27 47 13 10 56.52 23 48 24 4 85.71 28 49 17 8 68.00 25 50 15 11 57.69 26 51 18 8 69.23 26 52 11 8 57.89 19 53 19 5 79.17 24 54 11 3 78.57 14 55 14 5 73.68 19 56 9 5 64.29 14 57 11 9 55.00 20 58 12 4 75.00 16 59 8 2 80.00 10 60 9 4 69.23 13 61 6 5 54.55 11 62 11 4 73.33 15 63 15 3 83.33 18 64 12 7 63.16 19 65 12 3 80.00 15 66 8 6 57.14 14 67 7 1 87.50 8 68 7 4 63.64 11 69 8 4 66.67 12 70 7 3 70.00 10 71 10 2 83.33 12 72 12 4 75.00 16 73 4 3 57.14 7 74 7 3 70.00 10 75 3 1 75.00 4 76 7 2 77.78 9 77 7 3 70.00 10 78 4 3 57.14 7 79 3 1 75.00 4 80 7 0 100.00 7 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 17 155 9.88 172 2 8 108 6.90 116 3 6 85 6.59 91 4 1 89 1.11 90 5 4 89 4.30 93 6 6 104 5.45 110 7 6 105 5.41 111 8 2 101 1.94 103 9 6 91 6.19 97 10 7 84 7.69 91 11 3 88 3.30 91 12 1 69 1.43 70 13 6 65 8.45 71 14 2 85 2.30 87 15 4 85 4.49 89 16 0 81 0.00 81 17 0 79 0.00 79 18 4 81 4.71 85 19 3 79 3.66 82 20 2 72 2.70 74 21 1 57 1.72 58 22 0 69 0.00 69 23 0 80 0.00 80 24 2 64 3.03 66 25 2 79 2.47 81 26 0 72 0.00 72 27 2 72 2.70 74 28 0 76 0.00 76 29 1 55 1.79 56 30 0 61 0.00 61 31 5 56 8.20 61 32 0 63 0.00 63 33 0 55 0.00 55 34 1 54 1.82 55 35 0 60 0.00 60 36 2 50 3.85 52 37 0 60 0.00 60 38 2 46 4.17 48 39 0 55 0.00 55 40 0 45 0.00 45 41 1 50 1.96 51 42 0 32 0.00 32 43 2 37 5.13 39 44 0 41 0.00 41 45 0 43 0.00 43 46 1 40 2.44 41 47 1 51 1.92 52 48 0 32 0.00 32 49 1 41 2.38 42 50 2 43 4.44 45 51 0 26 0.00 26 52 1 36 2.70 37 53 0 49 0.00 49 54 2 25 7.41 27 55 0 19 0.00 19 56 0 35 0.00 35 57 0 28 0.00 28 58 2 30 6.25 32 59 0 24 0.00 24 60 1 22 4.35 23 61 2 24 7.69 26 62 0 17 0.00 17 63 0 26 0.00 26 64 1 25 3.85 26 65 1 21 4.55 22 66 0 19 0.00 19 67 2 20 9.09 22 68 0 18 0.00 18 69 0 22 0.00 22 70 0 23 0.00 23 71 0 20 0.00 20 72 0 21 0.00 21 73 1 28 3.45 29 74 1 18 5.26 19 75 0 18 0.00 18 76 0 15 0.00 15 77 0 8 0.00 8 78 0 11 0.00 11 79 0 15 0.00 15 80 0 5 0.00 5 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 33 442 6.95 475 2 23 372 5.82 395 3 21 360 5.51 381 4 17 330 4.90 347 5 13 312 4.00 325 6 19 267 6.64 286 7 11 285 3.72 296 8 6 315 1.87 321 9 15 289 4.93 304 10 10 294 3.29 304 11 10 270 3.57 280 12 11 262 4.03 273 13 12 254 4.51 266 14 8 273 2.85 281 15 5 283 1.74 288 16 6 281 2.09 287 17 9 272 3.20 281 18 8 242 3.20 250 19 6 244 2.40 250 20 9 201 4.29 210 21 6 215 2.71 221 22 9 227 3.81 236 23 4 217 1.81 221 24 3 210 1.41 213 25 5 223 2.19 228 26 13 234 5.26 247 27 10 208 4.59 218 28 12 205 5.53 217 29 11 216 4.85 227 30 7 184 3.66 191 31 7 197 3.43 204 32 10 171 5.52 181 33 8 198 3.88 206 34 6 180 3.23 186 35 3 178 1.66 181 36 7 177 3.80 184 37 5 166 2.92 171 38 5 176 2.76 181 39 3 167 1.76 170 40 4 183 2.14 187 41 6 160 3.61 166 42 5 148 3.27 153 43 6 146 3.95 152 44 2 161 1.23 163 45 0 152 0.00 152 46 2 163 1.21 165 47 7 130 5.11 137 48 3 140 2.10 143 49 2 127 1.55 129 50 5 137 3.52 142 51 4 119 3.25 123 52 4 115 3.36 119 53 2 104 1.89 106 54 2 94 2.08 96 55 3 102 2.86 105 56 3 98 2.97 101 57 2 94 2.08 96 58 0 104 0.00 104 59 3 101 2.88 104 60 2 84 2.33 86 61 2 78 2.50 80 62 4 89 4.30 93 63 0 95 0.00 95 64 1 86 1.15 87 65 1 88 1.12 89 66 1 79 1.25 80 67 1 57 1.72 58 68 1 71 1.39 72 69 4 59 6.35 63 70 2 61 3.17 63 71 2 67 2.90 69 72 2 59 3.28 61 73 0 62 0.00 62 74 1 57 1.72 58 75 1 83 1.19 84 76 1 57 1.72 58 77 1 55 1.79 56 78 0 56 0.00 56 79 1 52 1.89 53 80 0 34 0.00 34