zr2096_8_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 1802 lines in total Total number of methylation call strings processed: 3604 Final Cytosine Methylation Report ================================= Total number of C's analysed: 29661 Total methylated C's in CpG context: 2847 Total methylated C's in CHG context: 94 Total methylated C's in CHH context: 391 Total C to T conversions in CpG context: 962 Total C to T conversions in CHG context: 6761 Total C to T conversions in CHH context: 18606 C methylated in CpG context: 74.7% C methylated in CHG context: 1.4% C methylated in CHH context: 2.1%