zr2096_5_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 1996 lines in total Total number of methylation call strings processed: 3992 Final Cytosine Methylation Report ================================= Total number of C's analysed: 33583 Total methylated C's in CpG context: 3363 Total methylated C's in CHG context: 126 Total methylated C's in CHH context: 332 Total C to T conversions in CpG context: 1092 Total C to T conversions in CHG context: 7361 Total C to T conversions in CHH context: 21309 C methylated in CpG context: 75.5% C methylated in CHG context: 1.7% C methylated in CHH context: 1.5%