zr2096_2_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 1914 lines in total Total number of methylation call strings processed: 3828 Final Cytosine Methylation Report ================================= Total number of C's analysed: 28880 Total methylated C's in CpG context: 3219 Total methylated C's in CHG context: 108 Total methylated C's in CHH context: 343 Total C to T conversions in CpG context: 919 Total C to T conversions in CHG context: 6740 Total C to T conversions in CHH context: 17551 C methylated in CpG context: 77.8% C methylated in CHG context: 1.6% C methylated in CHH context: 1.9%