zr2096_7_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 5338007 lines in total Total number of methylation call strings processed: 10676014 Final Cytosine Methylation Report ================================= Total number of C's analysed: 92316637 Total methylated C's in CpG context: 9708762 Total methylated C's in CHG context: 344182 Total methylated C's in CHH context: 996765 Total C to T conversions in CpG context: 2509696 Total C to T conversions in CHG context: 20669192 Total C to T conversions in CHH context: 58088040 C methylated in CpG context: 79.5% C methylated in CHG context: 1.6% C methylated in CHH context: 1.7%