zr2096_6_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 4940751 lines in total Total number of methylation call strings processed: 9881502 Final Cytosine Methylation Report ================================= Total number of C's analysed: 77489938 Total methylated C's in CpG context: 8738664 Total methylated C's in CHG context: 235438 Total methylated C's in CHH context: 712136 Total C to T conversions in CpG context: 1946085 Total C to T conversions in CHG context: 17600634 Total C to T conversions in CHH context: 48256981 C methylated in CpG context: 81.8% C methylated in CHG context: 1.3% C methylated in CHH context: 1.5%