Total number of alignments analysed in zr2096_3_s1_R1_val_1_bismark_bt2_pe.bam: 6143399 Total number duplicated alignments removed: 356192 (5.80%) Duplicated alignments were found at: 275036 different position(s) Total count of deduplicated leftover sequences: 5787207 (94.20% of total)