zr2096_6_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 217 lines in total Total number of methylation call strings processed: 434 Final Cytosine Methylation Report ================================= Total number of C's analysed: 3484 Total methylated C's in CpG context: 423 Total methylated C's in CHG context: 5 Total methylated C's in CHH context: 27 Total C to T conversions in CpG context: 83 Total C to T conversions in CHG context: 794 Total C to T conversions in CHH context: 2152 C methylated in CpG context: 83.6% C methylated in CHG context: 0.6% C methylated in CHH context: 1.2%