CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 3 0 100.00 3 2 2 0 100.00 2 3 1 0 100.00 1 4 2 1 66.67 3 5 2 0 100.00 2 6 1 0 100.00 1 7 2 1 66.67 3 8 0 0 0 9 2 1 66.67 3 10 1 1 50.00 2 11 6 1 85.71 7 12 1 0 100.00 1 13 3 2 60.00 5 14 2 1 66.67 3 15 2 2 50.00 4 16 0 0 0 17 2 0 100.00 2 18 3 2 60.00 5 19 2 0 100.00 2 20 3 0 100.00 3 21 1 0 100.00 1 22 3 2 60.00 5 23 2 0 100.00 2 24 3 0 100.00 3 25 2 0 100.00 2 26 0 2 0.00 2 27 2 1 66.67 3 28 1 0 100.00 1 29 1 1 50.00 2 30 2 0 100.00 2 31 1 0 100.00 1 32 2 1 66.67 3 33 2 1 66.67 3 34 4 0 100.00 4 35 0 0 0 36 1 2 33.33 3 37 1 0 100.00 1 38 2 0 100.00 2 39 1 1 50.00 2 40 0 0 0 41 1 0 100.00 1 42 1 1 50.00 2 43 2 2 50.00 4 44 2 0 100.00 2 45 3 0 100.00 3 46 7 0 100.00 7 47 2 1 66.67 3 48 1 0 100.00 1 49 2 0 100.00 2 50 0 1 0.00 1 51 1 0 100.00 1 52 2 0 100.00 2 53 2 0 100.00 2 54 2 0 100.00 2 55 0 0 0 56 1 1 50.00 2 57 1 1 50.00 2 58 1 0 100.00 1 59 2 0 100.00 2 60 0 1 0.00 1 61 1 0 100.00 1 62 1 0 100.00 1 63 0 1 0.00 1 64 1 0 100.00 1 65 1 0 100.00 1 66 0 2 0.00 2 67 2 0 100.00 2 68 1 0 100.00 1 69 0 0 0 70 2 0 100.00 2 71 0 1 0.00 1 72 5 0 100.00 5 73 0 0 0 74 1 1 50.00 2 75 0 0 0 76 0 1 0.00 1 77 1 0 100.00 1 78 1 0 100.00 1 79 0 0 0 80 0 0 0 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 3 0.00 3 2 0 4 0.00 4 3 0 6 0.00 6 4 0 4 0.00 4 5 0 4 0.00 4 6 0 5 0.00 5 7 0 1 0.00 1 8 0 5 0.00 5 9 0 3 0.00 3 10 0 7 0.00 7 11 0 4 0.00 4 12 0 5 0.00 5 13 0 4 0.00 4 14 0 2 0.00 2 15 0 3 0.00 3 16 0 4 0.00 4 17 0 1 0.00 1 18 0 3 0.00 3 19 0 3 0.00 3 20 0 7 0.00 7 21 0 5 0.00 5 22 0 2 0.00 2 23 0 5 0.00 5 24 0 3 0.00 3 25 0 6 0.00 6 26 0 1 0.00 1 27 0 0 0 28 0 4 0.00 4 29 0 3 0.00 3 30 0 2 0.00 2 31 0 3 0.00 3 32 0 4 0.00 4 33 1 4 20.00 5 34 0 6 0.00 6 35 0 2 0.00 2 36 0 3 0.00 3 37 0 4 0.00 4 38 0 3 0.00 3 39 0 6 0.00 6 40 0 4 0.00 4 41 0 5 0.00 5 42 1 4 20.00 5 43 0 3 0.00 3 44 0 5 0.00 5 45 0 5 0.00 5 46 1 1 50.00 2 47 0 6 0.00 6 48 0 1 0.00 1 49 0 1 0.00 1 50 1 3 25.00 4 51 0 5 0.00 5 52 0 3 0.00 3 53 1 2 33.33 3 54 0 1 0.00 1 55 0 3 0.00 3 56 0 5 0.00 5 57 1 3 25.00 4 58 0 4 0.00 4 59 0 6 0.00 6 60 0 5 0.00 5 61 0 4 0.00 4 62 0 3 0.00 3 63 0 3 0.00 3 64 0 6 0.00 6 65 0 1 0.00 1 66 0 7 0.00 7 67 0 3 0.00 3 68 0 2 0.00 2 69 0 3 0.00 3 70 0 2 0.00 2 71 0 4 0.00 4 72 0 0 0 73 0 1 0.00 1 74 0 2 0.00 2 75 0 2 0.00 2 76 0 2 0.00 2 77 0 2 0.00 2 78 0 1 0.00 1 79 1 0 100.00 1 80 0 1 0.00 1 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 17 0.00 17 2 1 5 16.67 6 3 0 15 0.00 15 4 1 14 6.67 15 5 0 9 0.00 9 6 0 11 0.00 11 7 0 6 0.00 6 8 0 10 0.00 10 9 0 15 0.00 15 10 1 7 12.50 8 11 0 16 0.00 16 12 0 8 0.00 8 13 1 8 11.11 9 14 2 12 14.29 14 15 0 13 0.00 13 16 2 11 15.38 13 17 1 5 16.67 6 18 0 12 0.00 12 19 0 5 0.00 5 20 0 10 0.00 10 21 0 11 0.00 11 22 0 16 0.00 16 23 1 8 11.11 9 24 1 11 8.33 12 25 0 16 0.00 16 26 0 11 0.00 11 27 0 12 0.00 12 28 0 18 0.00 18 29 0 13 0.00 13 30 0 14 0.00 14 31 1 11 8.33 12 32 0 18 0.00 18 33 0 14 0.00 14 34 1 15 6.25 16 35 1 14 6.67 15 36 0 14 0.00 14 37 0 10 0.00 10 38 1 7 12.50 8 39 0 13 0.00 13 40 0 12 0.00 12 41 0 9 0.00 9 42 0 13 0.00 13 43 0 9 0.00 9 44 0 8 0.00 8 45 1 12 7.69 13 46 0 7 0.00 7 47 0 10 0.00 10 48 0 15 0.00 15 49 0 15 0.00 15 50 0 12 0.00 12 51 0 12 0.00 12 52 0 11 0.00 11 53 0 9 0.00 9 54 0 5 0.00 5 55 0 8 0.00 8 56 0 11 0.00 11 57 0 7 0.00 7 58 0 7 0.00 7 59 0 4 0.00 4 60 0 1 0.00 1 61 0 3 0.00 3 62 0 6 0.00 6 63 0 3 0.00 3 64 0 8 0.00 8 65 0 6 0.00 6 66 1 13 7.14 14 67 0 7 0.00 7 68 0 8 0.00 8 69 0 8 0.00 8 70 0 7 0.00 7 71 0 6 0.00 6 72 0 6 0.00 6 73 0 8 0.00 8 74 0 2 0.00 2 75 0 7 0.00 7 76 0 10 0.00 10 77 0 7 0.00 7 78 0 4 0.00 4 79 0 2 0.00 2 80 0 1 0.00 1 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2 0 100.00 2 2 2 0 100.00 2 3 0 1 0.00 1 4 0 0 0 5 1 0 100.00 1 6 0 0 0 7 3 1 75.00 4 8 0 0 0 9 1 0 100.00 1 10 0 0 0 11 0 0 0 12 2 0 100.00 2 13 1 0 100.00 1 14 0 0 0 15 0 0 0 16 0 0 0 17 0 0 0 18 0 0 0 19 2 0 100.00 2 20 0 0 0 21 1 0 100.00 1 22 0 0 0 23 0 0 0 24 0 0 0 25 0 0 0 26 0 0 0 27 0 0 0 28 1 0 100.00 1 29 1 0 100.00 1 30 0 0 0 31 2 0 100.00 2 32 0 0 0 33 0 0 0 34 0 0 0 35 0 0 0 36 0 0 0 37 0 0 0 38 0 0 0 39 0 0 0 40 2 0 100.00 2 41 0 0 0 42 0 0 0 43 1 0 100.00 1 44 1 0 100.00 1 45 0 0 0 46 0 0 0 47 1 0 100.00 1 48 0 0 0 49 1 0 100.00 1 50 0 0 0 51 0 0 0 52 1 1 50.00 2 53 0 0 0 54 1 0 100.00 1 55 0 0 0 56 0 0 0 57 0 0 0 58 0 0 0 59 1 0 100.00 1 60 0 0 0 61 0 0 0 62 0 0 0 63 0 0 0 64 0 0 0 65 0 0 0 66 0 0 0 67 0 0 0 68 0 0 0 69 0 0 0 70 0 0 0 71 0 0 0 72 0 0 0 73 0 0 0 74 0 0 0 75 0 0 0 76 0 0 0 77 0 0 0 78 0 0 0 79 0 0 0 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 0 3 0.00 3 2 0 0 0 3 0 1 0.00 1 4 0 3 0.00 3 5 0 0 0 6 0 0 0 7 0 2 0.00 2 8 0 7 0.00 7 9 0 1 0.00 1 10 0 4 0.00 4 11 0 3 0.00 3 12 0 1 0.00 1 13 0 1 0.00 1 14 0 1 0.00 1 15 0 1 0.00 1 16 0 1 0.00 1 17 0 1 0.00 1 18 0 2 0.00 2 19 0 1 0.00 1 20 0 0 0 21 0 0 0 22 0 0 0 23 0 0 0 24 0 0 0 25 0 0 0 26 0 2 0.00 2 27 0 2 0.00 2 28 0 0 0 29 0 0 0 30 0 1 0.00 1 31 0 2 0.00 2 32 0 0 0 33 0 0 0 34 0 1 0.00 1 35 0 0 0 36 0 2 0.00 2 37 0 1 0.00 1 38 0 2 0.00 2 39 0 1 0.00 1 40 0 0 0 41 0 2 0.00 2 42 0 0 0 43 0 1 0.00 1 44 0 1 0.00 1 45 0 0 0 46 0 2 0.00 2 47 0 0 0 48 0 0 0 49 0 0 0 50 0 0 0 51 0 0 0 52 0 0 0 53 0 0 0 54 0 0 0 55 0 1 0.00 1 56 0 0 0 57 0 0 0 58 0 0 0 59 0 1 0.00 1 60 0 0 0 61 0 0 0 62 0 0 0 63 0 0 0 64 0 0 0 65 0 0 0 66 0 0 0 67 0 0 0 68 0 0 0 69 0 0 0 70 0 1 0.00 1 71 0 0 0 72 0 0 0 73 0 0 0 74 0 0 0 75 0 0 0 76 0 0 0 77 0 0 0 78 0 0 0 79 0 0 0 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 4 20.00 5 2 0 2 0.00 2 3 0 9 0.00 9 4 0 5 0.00 5 5 0 4 0.00 4 6 0 5 0.00 5 7 0 5 0.00 5 8 0 2 0.00 2 9 0 10 0.00 10 10 0 6 0.00 6 11 0 7 0.00 7 12 0 5 0.00 5 13 0 3 0.00 3 14 0 8 0.00 8 15 0 5 0.00 5 16 0 7 0.00 7 17 0 5 0.00 5 18 0 3 0.00 3 19 0 2 0.00 2 20 0 1 0.00 1 21 0 3 0.00 3 22 0 2 0.00 2 23 0 4 0.00 4 24 0 5 0.00 5 25 1 5 16.67 6 26 0 4 0.00 4 27 0 2 0.00 2 28 0 0 0 29 0 1 0.00 1 30 0 4 0.00 4 31 0 4 0.00 4 32 0 1 0.00 1 33 0 3 0.00 3 34 0 0 0 35 0 2 0.00 2 36 0 3 0.00 3 37 0 2 0.00 2 38 0 0 0 39 0 2 0.00 2 40 0 1 0.00 1 41 0 3 0.00 3 42 0 0 0 43 0 1 0.00 1 44 0 3 0.00 3 45 0 3 0.00 3 46 0 4 0.00 4 47 0 2 0.00 2 48 0 4 0.00 4 49 0 3 0.00 3 50 0 1 0.00 1 51 0 1 0.00 1 52 0 3 0.00 3 53 0 0 0 54 0 0 0 55 0 0 0 56 0 1 0.00 1 57 0 3 0.00 3 58 0 0 0 59 0 2 0.00 2 60 0 0 0 61 0 0 0 62 0 0 0 63 0 1 0.00 1 64 0 2 0.00 2 65 0 0 0 66 0 0 0 67 0 0 0 68 0 2 0.00 2 69 0 3 0.00 3 70 0 0 0 71 0 0 0 72 0 2 0.00 2 73 0 1 0.00 1 74 0 0 0 75 0 0 0 76 0 0 0 77 0 0 0 78 0 1 0.00 1 79 0 1 0.00 1