zr2096_9_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 164 lines in total Total number of methylation call strings processed: 328 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2907 Total methylated C's in CpG context: 346 Total methylated C's in CHG context: 16 Total methylated C's in CHH context: 23 Total C to T conversions in CpG context: 53 Total C to T conversions in CHG context: 697 Total C to T conversions in CHH context: 1772 C methylated in CpG context: 86.7% C methylated in CHG context: 2.2% C methylated in CHH context: 1.3%