CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 3 1 75.00 4 2 0 1 0.00 1 3 5 0 100.00 5 4 3 1 75.00 4 5 3 1 75.00 4 6 6 0 100.00 6 7 7 0 100.00 7 8 1 0 100.00 1 9 2 1 66.67 3 10 1 4 20.00 5 11 3 0 100.00 3 12 5 2 71.43 7 13 7 0 100.00 7 14 3 2 60.00 5 15 6 1 85.71 7 16 5 0 100.00 5 17 8 2 80.00 10 18 2 0 100.00 2 19 0 2 0.00 2 20 2 0 100.00 2 21 4 2 66.67 6 22 3 1 75.00 4 23 6 1 85.71 7 24 4 0 100.00 4 25 3 2 60.00 5 26 2 1 66.67 3 27 3 1 75.00 4 28 5 2 71.43 7 29 4 1 80.00 5 30 5 2 71.43 7 31 6 2 75.00 8 32 3 3 50.00 6 33 7 1 87.50 8 34 0 0 0 35 9 0 100.00 9 36 5 1 83.33 6 37 1 1 50.00 2 38 5 1 83.33 6 39 2 1 66.67 3 40 5 0 100.00 5 41 4 1 80.00 5 42 1 0 100.00 1 43 5 1 83.33 6 44 5 0 100.00 5 45 1 2 33.33 3 46 3 2 60.00 5 47 5 0 100.00 5 48 3 1 75.00 4 49 5 0 100.00 5 50 0 1 0.00 1 51 3 0 100.00 3 52 1 0 100.00 1 53 4 0 100.00 4 54 1 1 50.00 2 55 5 0 100.00 5 56 4 1 80.00 5 57 2 1 66.67 3 58 5 1 83.33 6 59 2 0 100.00 2 60 7 1 87.50 8 61 2 3 40.00 5 62 3 0 100.00 3 63 4 1 80.00 5 64 1 0 100.00 1 65 2 0 100.00 2 66 5 1 83.33 6 67 4 1 80.00 5 68 2 0 100.00 2 69 0 0 0 70 4 0 100.00 4 71 3 0 100.00 3 72 2 1 66.67 3 73 1 0 100.00 1 74 1 1 50.00 2 75 1 0 100.00 1 76 0 2 0.00 2 77 2 0 100.00 2 78 3 0 100.00 3 79 0 1 0.00 1 80 1 0 100.00 1 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 9 0.00 9 2 0 7 0.00 7 3 0 6 0.00 6 4 0 8 0.00 8 5 0 11 0.00 11 6 0 7 0.00 7 7 0 11 0.00 11 8 0 10 0.00 10 9 0 3 0.00 3 10 0 4 0.00 4 11 0 9 0.00 9 12 0 4 0.00 4 13 1 8 11.11 9 14 0 16 0.00 16 15 1 10 9.09 11 16 0 6 0.00 6 17 1 10 9.09 11 18 0 12 0.00 12 19 0 6 0.00 6 20 0 12 0.00 12 21 0 7 0.00 7 22 0 11 0.00 11 23 0 7 0.00 7 24 0 8 0.00 8 25 0 7 0.00 7 26 0 11 0.00 11 27 0 9 0.00 9 28 0 7 0.00 7 29 0 7 0.00 7 30 0 11 0.00 11 31 1 5 16.67 6 32 0 6 0.00 6 33 0 10 0.00 10 34 0 9 0.00 9 35 1 5 16.67 6 36 0 8 0.00 8 37 0 7 0.00 7 38 0 8 0.00 8 39 0 5 0.00 5 40 0 5 0.00 5 41 1 9 10.00 10 42 0 6 0.00 6 43 2 5 28.57 7 44 1 9 10.00 10 45 0 12 0.00 12 46 0 6 0.00 6 47 0 5 0.00 5 48 0 7 0.00 7 49 0 6 0.00 6 50 0 6 0.00 6 51 0 10 0.00 10 52 0 7 0.00 7 53 0 4 0.00 4 54 0 10 0.00 10 55 0 8 0.00 8 56 1 6 14.29 7 57 0 8 0.00 8 58 0 5 0.00 5 59 0 9 0.00 9 60 0 5 0.00 5 61 0 4 0.00 4 62 0 5 0.00 5 63 0 2 0.00 2 64 0 5 0.00 5 65 0 10 0.00 10 66 0 7 0.00 7 67 0 3 0.00 3 68 0 8 0.00 8 69 0 3 0.00 3 70 0 4 0.00 4 71 0 11 0.00 11 72 0 9 0.00 9 73 0 1 0.00 1 74 0 3 0.00 3 75 0 7 0.00 7 76 0 5 0.00 5 77 0 3 0.00 3 78 0 4 0.00 4 79 0 4 0.00 4 80 0 2 0.00 2 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 26 0.00 26 2 1 26 3.70 27 3 0 23 0.00 23 4 0 26 0.00 26 5 0 19 0.00 19 6 1 13 7.14 14 7 0 21 0.00 21 8 0 25 0.00 25 9 0 21 0.00 21 10 0 26 0.00 26 11 0 23 0.00 23 12 0 21 0.00 21 13 1 28 3.45 29 14 0 22 0.00 22 15 2 25 7.41 27 16 1 29 3.33 30 17 0 27 0.00 27 18 0 15 0.00 15 19 0 28 0.00 28 20 0 21 0.00 21 21 0 22 0.00 22 22 0 29 0.00 29 23 0 37 0.00 37 24 0 12 0.00 12 25 0 23 0.00 23 26 1 22 4.35 23 27 0 22 0.00 22 28 0 21 0.00 21 29 0 19 0.00 19 30 1 22 4.35 23 31 0 15 0.00 15 32 0 28 0.00 28 33 1 19 5.00 20 34 0 27 0.00 27 35 0 20 0.00 20 36 0 24 0.00 24 37 0 21 0.00 21 38 0 17 0.00 17 39 0 16 0.00 16 40 0 18 0.00 18 41 0 22 0.00 22 42 0 28 0.00 28 43 1 21 4.55 22 44 0 11 0.00 11 45 0 24 0.00 24 46 1 23 4.17 24 47 0 24 0.00 24 48 1 20 4.76 21 49 0 20 0.00 20 50 0 15 0.00 15 51 0 23 0.00 23 52 0 18 0.00 18 53 0 13 0.00 13 54 1 21 4.55 22 55 1 15 6.25 16 56 0 19 0.00 19 57 0 14 0.00 14 58 1 17 5.56 18 59 1 16 5.88 17 60 0 11 0.00 11 61 0 20 0.00 20 62 0 20 0.00 20 63 0 19 0.00 19 64 0 15 0.00 15 65 0 14 0.00 14 66 0 19 0.00 19 67 0 15 0.00 15 68 0 20 0.00 20 69 0 19 0.00 19 70 0 19 0.00 19 71 0 12 0.00 12 72 0 16 0.00 16 73 0 8 0.00 8 74 0 13 0.00 13 75 0 17 0.00 17 76 0 10 0.00 10 77 0 12 0.00 12 78 0 10 0.00 10 79 0 8 0.00 8 80 0 3 0.00 3 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4 0 100.00 4 2 3 1 75.00 4 3 3 0 100.00 3 4 2 1 66.67 3 5 2 0 100.00 2 6 0 1 0.00 1 7 1 1 50.00 2 8 0 0 0 9 0 0 0 10 1 0 100.00 1 11 1 0 100.00 1 12 2 0 100.00 2 13 0 0 0 14 3 0 100.00 3 15 0 1 0.00 1 16 1 0 100.00 1 17 1 0 100.00 1 18 0 0 0 19 1 0 100.00 1 20 2 0 100.00 2 21 0 0 0 22 1 0 100.00 1 23 2 0 100.00 2 24 4 1 80.00 5 25 1 0 100.00 1 26 2 0 100.00 2 27 2 1 66.67 3 28 0 0 0 29 2 1 66.67 3 30 0 1 0.00 1 31 0 0 0 32 0 0 0 33 2 0 100.00 2 34 0 0 0 35 0 0 0 36 0 0 0 37 0 2 0.00 2 38 1 0 100.00 1 39 0 0 0 40 0 1 0.00 1 41 1 0 100.00 1 42 0 0 0 43 1 0 100.00 1 44 0 0 0 45 0 0 0 46 0 0 0 47 0 0 0 48 0 0 0 49 0 0 0 50 0 0 0 51 0 0 0 52 0 0 0 53 0 0 0 54 1 0 100.00 1 55 0 0 0 56 0 0 0 57 1 0 100.00 1 58 0 0 0 59 0 0 0 60 0 0 0 61 0 0 0 62 0 0 0 63 0 0 0 64 0 0 0 65 0 0 0 66 0 0 0 67 0 0 0 68 0 0 0 69 1 0 100.00 1 70 0 0 0 71 0 0 0 72 0 0 0 73 0 0 0 74 0 0 0 75 0 0 0 76 0 0 0 77 0 0 0 78 1 0 100.00 1 79 0 0 0 80 1 0 100.00 1 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 0 7 0.00 7 2 0 3 0.00 3 3 1 3 25.00 4 4 0 3 0.00 3 5 0 4 0.00 4 6 0 2 0.00 2 7 0 2 0.00 2 8 0 3 0.00 3 9 0 2 0.00 2 10 0 3 0.00 3 11 0 4 0.00 4 12 0 0 0 13 0 3 0.00 3 14 0 3 0.00 3 15 0 5 0.00 5 16 0 1 0.00 1 17 0 3 0.00 3 18 0 3 0.00 3 19 0 0 0 20 0 1 0.00 1 21 0 1 0.00 1 22 0 1 0.00 1 23 0 2 0.00 2 24 0 4 0.00 4 25 0 1 0.00 1 26 0 1 0.00 1 27 0 5 0.00 5 28 0 1 0.00 1 29 0 0 0 30 0 3 0.00 3 31 0 2 0.00 2 32 0 2 0.00 2 33 0 3 0.00 3 34 0 2 0.00 2 35 0 2 0.00 2 36 0 2 0.00 2 37 0 1 0.00 1 38 0 3 0.00 3 39 0 0 0 40 0 2 0.00 2 41 0 2 0.00 2 42 0 1 0.00 1 43 0 0 0 44 0 0 0 45 0 1 0.00 1 46 0 1 0.00 1 47 1 0 100.00 1 48 0 2 0.00 2 49 0 0 0 50 1 0 100.00 1 51 0 1 0.00 1 52 0 0 0 53 0 2 0.00 2 54 0 0 0 55 0 1 0.00 1 56 0 0 0 57 0 0 0 58 0 1 0.00 1 59 0 1 0.00 1 60 0 0 0 61 0 0 0 62 0 1 0.00 1 63 0 0 0 64 0 0 0 65 0 1 0.00 1 66 0 0 0 67 0 0 0 68 0 1 0.00 1 69 0 0 0 70 0 0 0 71 0 0 0 72 0 1 0.00 1 73 0 0 0 74 0 1 0.00 1 75 0 0 0 76 0 0 0 77 0 0 0 78 0 0 0 79 0 1 0.00 1 80 0 0 0 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 0 18 0.00 18 2 0 11 0.00 11 3 0 16 0.00 16 4 0 14 0.00 14 5 0 18 0.00 18 6 0 11 0.00 11 7 0 8 0.00 8 8 0 9 0.00 9 9 0 14 0.00 14 10 0 11 0.00 11 11 1 13 7.14 14 12 0 10 0.00 10 13 0 12 0.00 12 14 1 5 16.67 6 15 0 3 0.00 3 16 0 8 0.00 8 17 1 11 8.33 12 18 1 6 14.29 7 19 0 6 0.00 6 20 1 5 16.67 6 21 0 12 0.00 12 22 0 3 0.00 3 23 0 5 0.00 5 24 0 6 0.00 6 25 0 5 0.00 5 26 0 2 0.00 2 27 0 5 0.00 5 28 0 6 0.00 6 29 0 4 0.00 4 30 0 3 0.00 3 31 0 7 0.00 7 32 0 4 0.00 4 33 0 6 0.00 6 34 0 2 0.00 2 35 0 2 0.00 2 36 0 4 0.00 4 37 0 3 0.00 3 38 0 5 0.00 5 39 0 6 0.00 6 40 0 6 0.00 6 41 0 6 0.00 6 42 0 4 0.00 4 43 0 2 0.00 2 44 0 8 0.00 8 45 0 3 0.00 3 46 0 3 0.00 3 47 0 2 0.00 2 48 0 2 0.00 2 49 0 2 0.00 2 50 0 4 0.00 4 51 0 2 0.00 2 52 0 4 0.00 4 53 0 0 0 54 0 3 0.00 3 55 0 2 0.00 2 56 0 4 0.00 4 57 0 1 0.00 1 58 0 2 0.00 2 59 0 3 0.00 3 60 0 2 0.00 2 61 0 0 0 62 0 1 0.00 1 63 0 2 0.00 2 64 0 1 0.00 1 65 0 0 0 66 0 0 0 67 0 1 0.00 1 68 0 2 0.00 2 69 0 2 0.00 2 70 0 3 0.00 3 71 0 1 0.00 1 72 0 1 0.00 1 73 0 2 0.00 2 74 0 1 0.00 1 75 0 1 0.00 1 76 0 0 0 77 0 5 0.00 5 78 0 2 0.00 2 79 1 1 50.00 2 80 0 1 0.00 1