zr2096_3_s1_R1_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 194 lines in total Total number of methylation call strings processed: 388 Final Cytosine Methylation Report ================================= Total number of C's analysed: 3338 Total methylated C's in CpG context: 393 Total methylated C's in CHG context: 11 Total methylated C's in CHH context: 23 Total C to T conversions in CpG context: 90 Total C to T conversions in CHG context: 733 Total C to T conversions in CHH context: 2088 C methylated in CpG context: 81.4% C methylated in CHG context: 1.5% C methylated in CHH context: 1.1%