CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1 2 33.33 3 2 3 0 100.00 3 3 3 2 60.00 5 4 3 1 75.00 4 5 2 0 100.00 2 6 1 0 100.00 1 7 2 1 66.67 3 8 1 7 12.50 8 9 3 1 75.00 4 10 8 0 100.00 8 11 6 0 100.00 6 12 4 1 80.00 5 13 3 1 75.00 4 14 5 4 55.56 9 15 3 1 75.00 4 16 5 2 71.43 7 17 2 2 50.00 4 18 6 2 75.00 8 19 12 3 80.00 15 20 3 0 100.00 3 21 4 1 80.00 5 22 5 1 83.33 6 23 4 0 100.00 4 24 3 1 75.00 4 25 7 1 87.50 8 26 6 0 100.00 6 27 7 1 87.50 8 28 2 1 66.67 3 29 3 1 75.00 4 30 7 1 87.50 8 31 4 2 66.67 6 32 0 3 0.00 3 33 5 1 83.33 6 34 3 0 100.00 3 35 5 2 71.43 7 36 1 2 33.33 3 37 3 1 75.00 4 38 3 0 100.00 3 39 2 2 50.00 4 40 2 4 33.33 6 41 2 1 66.67 3 42 2 1 66.67 3 43 3 0 100.00 3 44 1 1 50.00 2 45 2 3 40.00 5 46 2 0 100.00 2 47 1 2 33.33 3 48 2 3 40.00 5 49 5 0 100.00 5 50 0 0 0 51 3 1 75.00 4 52 7 1 87.50 8 53 4 0 100.00 4 54 1 0 100.00 1 55 3 3 50.00 6 56 2 1 66.67 3 57 3 2 60.00 5 58 5 1 83.33 6 59 0 0 0 60 4 1 80.00 5 61 0 1 0.00 1 62 4 3 57.14 7 63 2 1 66.67 3 64 2 1 66.67 3 65 3 2 60.00 5 66 2 0 100.00 2 67 4 0 100.00 4 68 1 0 100.00 1 69 0 0 0 70 2 4 33.33 6 71 2 1 66.67 3 72 2 0 100.00 2 73 3 1 75.00 4 74 0 0 0 75 1 0 100.00 1 76 6 0 100.00 6 77 0 0 0 78 4 2 66.67 6 79 2 0 100.00 2 80 0 0 0 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1 15 6.25 16 2 0 10 0.00 10 3 0 6 0.00 6 4 0 10 0.00 10 5 0 7 0.00 7 6 0 5 0.00 5 7 0 8 0.00 8 8 0 10 0.00 10 9 0 6 0.00 6 10 0 9 0.00 9 11 0 7 0.00 7 12 0 3 0.00 3 13 0 9 0.00 9 14 0 7 0.00 7 15 0 8 0.00 8 16 0 9 0.00 9 17 0 7 0.00 7 18 0 10 0.00 10 19 0 15 0.00 15 20 0 6 0.00 6 21 1 8 11.11 9 22 1 9 10.00 10 23 0 6 0.00 6 24 0 7 0.00 7 25 0 5 0.00 5 26 0 15 0.00 15 27 0 16 0.00 16 28 0 10 0.00 10 29 0 6 0.00 6 30 0 10 0.00 10 31 0 12 0.00 12 32 0 2 0.00 2 33 0 12 0.00 12 34 0 6 0.00 6 35 0 10 0.00 10 36 0 9 0.00 9 37 0 5 0.00 5 38 0 6 0.00 6 39 0 7 0.00 7 40 0 7 0.00 7 41 0 8 0.00 8 42 0 11 0.00 11 43 1 10 9.09 11 44 0 4 0.00 4 45 0 5 0.00 5 46 0 11 0.00 11 47 0 8 0.00 8 48 0 4 0.00 4 49 0 9 0.00 9 50 0 7 0.00 7 51 0 3 0.00 3 52 0 7 0.00 7 53 0 3 0.00 3 54 1 11 8.33 12 55 1 8 11.11 9 56 0 5 0.00 5 57 1 9 10.00 10 58 0 7 0.00 7 59 0 8 0.00 8 60 0 7 0.00 7 61 0 8 0.00 8 62 0 4 0.00 4 63 0 7 0.00 7 64 0 3 0.00 3 65 0 5 0.00 5 66 0 5 0.00 5 67 0 4 0.00 4 68 0 6 0.00 6 69 1 5 16.67 6 70 0 3 0.00 3 71 0 4 0.00 4 72 0 2 0.00 2 73 0 1 0.00 1 74 0 4 0.00 4 75 0 6 0.00 6 76 0 5 0.00 5 77 0 5 0.00 5 78 0 1 0.00 1 79 0 2 0.00 2 80 0 2 0.00 2 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 0 27 0.00 27 2 1 21 4.55 22 3 0 25 0.00 25 4 0 23 0.00 23 5 0 24 0.00 24 6 0 21 0.00 21 7 0 26 0.00 26 8 2 24 7.69 26 9 0 25 0.00 25 10 0 24 0.00 24 11 0 23 0.00 23 12 1 25 3.85 26 13 0 18 0.00 18 14 0 17 0.00 17 15 0 24 0.00 24 16 0 17 0.00 17 17 0 16 0.00 16 18 0 26 0.00 26 19 0 25 0.00 25 20 0 28 0.00 28 21 0 25 0.00 25 22 0 32 0.00 32 23 0 34 0.00 34 24 0 24 0.00 24 25 0 23 0.00 23 26 0 23 0.00 23 27 0 20 0.00 20 28 0 28 0.00 28 29 0 20 0.00 20 30 1 18 5.26 19 31 0 22 0.00 22 32 0 25 0.00 25 33 0 21 0.00 21 34 1 24 4.00 25 35 1 34 2.86 35 36 0 23 0.00 23 37 2 24 7.69 26 38 0 25 0.00 25 39 0 26 0.00 26 40 1 22 4.35 23 41 0 29 0.00 29 42 0 35 0.00 35 43 2 29 6.45 31 44 1 30 3.23 31 45 1 27 3.57 28 46 0 27 0.00 27 47 0 22 0.00 22 48 0 27 0.00 27 49 0 22 0.00 22 50 0 21 0.00 21 51 0 24 0.00 24 52 0 15 0.00 15 53 0 17 0.00 17 54 1 15 6.25 16 55 1 18 5.26 19 56 0 17 0.00 17 57 0 18 0.00 18 58 1 17 5.56 18 59 0 14 0.00 14 60 0 22 0.00 22 61 0 12 0.00 12 62 0 18 0.00 18 63 1 16 5.88 17 64 0 26 0.00 26 65 0 13 0.00 13 66 0 10 0.00 10 67 0 16 0.00 16 68 1 19 5.00 20 69 0 15 0.00 15 70 0 18 0.00 18 71 0 15 0.00 15 72 0 13 0.00 13 73 0 23 0.00 23 74 1 12 7.69 13 75 0 17 0.00 17 76 0 6 0.00 6 77 0 16 0.00 16 78 0 16 0.00 16 79 0 13 0.00 13 80 0 9 0.00 9 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 1 50.00 2 2 5 1 83.33 6 3 2 0 100.00 2 4 3 0 100.00 3 5 1 0 100.00 1 6 2 0 100.00 2 7 3 1 75.00 4 8 2 1 66.67 3 9 1 0 100.00 1 10 1 0 100.00 1 11 2 0 100.00 2 12 2 1 66.67 3 13 3 0 100.00 3 14 2 0 100.00 2 15 0 0 0 16 3 0 100.00 3 17 2 0 100.00 2 18 1 1 50.00 2 19 1 0 100.00 1 20 5 0 100.00 5 21 3 0 100.00 3 22 0 0 0 23 0 0 0 24 1 0 100.00 1 25 3 0 100.00 3 26 1 0 100.00 1 27 3 0 100.00 3 28 1 0 100.00 1 29 0 0 0 30 1 1 50.00 2 31 1 1 50.00 2 32 2 1 66.67 3 33 1 1 50.00 2 34 0 0 0 35 1 0 100.00 1 36 2 0 100.00 2 37 0 0 0 38 1 0 100.00 1 39 0 0 0 40 1 0 100.00 1 41 5 1 83.33 6 42 0 1 0.00 1 43 2 0 100.00 2 44 0 0 0 45 1 0 100.00 1 46 2 0 100.00 2 47 1 0 100.00 1 48 2 0 100.00 2 49 0 0 0 50 0 0 0 51 2 0 100.00 2 52 0 0 0 53 2 1 66.67 3 54 2 0 100.00 2 55 0 0 0 56 1 0 100.00 1 57 0 0 0 58 1 0 100.00 1 59 0 0 0 60 0 0 0 61 1 0 100.00 1 62 1 1 50.00 2 63 0 0 0 64 0 0 0 65 1 0 100.00 1 66 0 1 0.00 1 67 0 0 0 68 0 1 0.00 1 69 1 0 100.00 1 70 0 0 0 71 0 0 0 72 0 0 0 73 1 0 100.00 1 74 0 0 0 75 0 1 0.00 1 76 0 0 0 77 0 0 0 78 1 0 100.00 1 79 0 0 0 80 1 0 100.00 1 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 4 20.00 5 2 0 3 0.00 3 3 0 4 0.00 4 4 0 7 0.00 7 5 0 2 0.00 2 6 0 3 0.00 3 7 0 1 0.00 1 8 0 5 0.00 5 9 0 5 0.00 5 10 0 4 0.00 4 11 0 3 0.00 3 12 0 5 0.00 5 13 0 1 0.00 1 14 0 7 0.00 7 15 0 4 0.00 4 16 1 4 20.00 5 17 1 5 16.67 6 18 0 2 0.00 2 19 0 2 0.00 2 20 0 0 0 21 0 1 0.00 1 22 0 3 0.00 3 23 0 5 0.00 5 24 0 3 0.00 3 25 0 2 0.00 2 26 0 2 0.00 2 27 0 1 0.00 1 28 0 4 0.00 4 29 0 1 0.00 1 30 0 0 0 31 0 5 0.00 5 32 0 2 0.00 2 33 0 2 0.00 2 34 0 0 0 35 0 3 0.00 3 36 0 1 0.00 1 37 0 4 0.00 4 38 0 1 0.00 1 39 0 1 0.00 1 40 0 0 0 41 0 1 0.00 1 42 0 2 0.00 2 43 0 1 0.00 1 44 0 1 0.00 1 45 0 1 0.00 1 46 0 0 0 47 0 1 0.00 1 48 0 2 0.00 2 49 0 0 0 50 0 1 0.00 1 51 0 1 0.00 1 52 0 1 0.00 1 53 0 1 0.00 1 54 0 2 0.00 2 55 0 1 0.00 1 56 0 0 0 57 0 2 0.00 2 58 0 2 0.00 2 59 0 0 0 60 0 0 0 61 0 0 0 62 0 0 0 63 0 2 0.00 2 64 0 1 0.00 1 65 0 0 0 66 0 2 0.00 2 67 0 2 0.00 2 68 0 1 0.00 1 69 0 3 0.00 3 70 0 1 0.00 1 71 0 2 0.00 2 72 0 1 0.00 1 73 0 1 0.00 1 74 0 0 0 75 0 1 0.00 1 76 0 2 0.00 2 77 0 0 0 78 0 0 0 79 0 1 0.00 1 80 0 0 0 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1 14 6.67 15 2 0 9 0.00 9 3 0 13 0.00 13 4 0 13 0.00 13 5 0 8 0.00 8 6 0 10 0.00 10 7 0 7 0.00 7 8 0 8 0.00 8 9 0 8 0.00 8 10 0 10 0.00 10 11 0 10 0.00 10 12 0 8 0.00 8 13 0 9 0.00 9 14 0 7 0.00 7 15 0 9 0.00 9 16 0 4 0.00 4 17 0 8 0.00 8 18 0 12 0.00 12 19 1 7 12.50 8 20 0 8 0.00 8 21 0 11 0.00 11 22 0 7 0.00 7 23 0 9 0.00 9 24 0 6 0.00 6 25 0 8 0.00 8 26 0 9 0.00 9 27 0 6 0.00 6 28 0 6 0.00 6 29 0 6 0.00 6 30 0 4 0.00 4 31 0 5 0.00 5 32 0 3 0.00 3 33 0 5 0.00 5 34 0 7 0.00 7 35 0 4 0.00 4 36 0 5 0.00 5 37 0 3 0.00 3 38 0 1 0.00 1 39 0 6 0.00 6 40 0 2 0.00 2 41 0 4 0.00 4 42 0 5 0.00 5 43 0 4 0.00 4 44 0 3 0.00 3 45 0 5 0.00 5 46 0 5 0.00 5 47 0 2 0.00 2 48 0 4 0.00 4 49 0 2 0.00 2 50 0 4 0.00 4 51 0 4 0.00 4 52 0 1 0.00 1 53 0 1 0.00 1 54 0 3 0.00 3 55 0 2 0.00 2 56 0 1 0.00 1 57 0 7 0.00 7 58 0 2 0.00 2 59 0 3 0.00 3 60 0 6 0.00 6 61 0 2 0.00 2 62 0 4 0.00 4 63 1 3 25.00 4 64 0 5 0.00 5 65 0 5 0.00 5 66 0 3 0.00 3 67 0 2 0.00 2 68 0 0 0 69 0 0 0 70 0 2 0.00 2 71 0 4 0.00 4 72 0 2 0.00 2 73 0 1 0.00 1 74 0 1 0.00 1 75 0 1 0.00 1 76 0 1 0.00 1 77 0 1 0.00 1 78 0 0 0 79 0 2 0.00 2 80 0 4 0.00 4