zr2096_8_s1_R2_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 5645 lines in total Total number of methylation call strings processed: 5645 Final Cytosine Methylation Report ================================= Total number of C's analysed: 92445 Total methylated C's in CpG context: 7495 Total methylated C's in CHG context: 721 Total methylated C's in CHH context: 2989 Total C to T conversions in CpG context: 3847 Total C to T conversions in CHG context: 19920 Total C to T conversions in CHH context: 57473 C methylated in CpG context: 66.1% C methylated in CHG context: 3.5% C methylated in CHH context: 4.9%