zr2096_6_s1_R2_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6416 lines in total Total number of methylation call strings processed: 6416 Final Cytosine Methylation Report ================================= Total number of C's analysed: 103399 Total methylated C's in CpG context: 9835 Total methylated C's in CHG context: 712 Total methylated C's in CHH context: 2742 Total C to T conversions in CpG context: 3932 Total C to T conversions in CHG context: 22726 Total C to T conversions in CHH context: 63452 C methylated in CpG context: 71.4% C methylated in CHG context: 3.0% C methylated in CHH context: 4.1%