Geoduck-juvenile-ambient-exposure-RNA-EPI-123-6_S46_L006_R2

Basic Statistics

Measure	Value
Filename	Geoduck-juvenile-ambient-exposure-RNA-EPI-123-6_S46_L006_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1197
Sequences flagged as poor quality	0
Sequence length	45-151
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC	15	1.2531328320802004	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12	1.0025062656641603	No Hit
TTCCGAAGACGGGAAGAAGCCGAGAGAGCAGTGAAGGATATCAACTTTAA	7	0.5847953216374269	No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	7	0.5847953216374269	Illumina Single End PCR Primer 1 (100% over 50bp)
TTTTACTTTGCGCAATAAGTGACTTGTAACCTGTTTTTTTATTGGGCTGC	6	0.5012531328320802	No Hit
TTTTTTGCATGGTTGAGTGGCTAATGAAGAACGACATAGTGATACTTTTT	5	0.4177109440267335	No Hit
GTTTACGAACTCGAAACTCTATTGTAACAGAGCTACAGTCTGTACAAAGA	5	0.4177109440267335	No Hit
TTTTAATCTACTTGTAAATGTTTTTATAAAATACATCTCATGACCAACAC	5	0.4177109440267335	No Hit
CTTTATCATAATTTGGCTTTATTAGTATTAGTTTTCATTATAAGGATAGT	4	0.3341687552213868	No Hit
TGACATTCGGTCTTTCCGGGGTATATAAACAGTTCCTTAATTGGATAGTT	4	0.3341687552213868	No Hit
CTTTAACTAATATACATATATTAACAATTCACCAACAGACACCATATACA	3	0.2506265664160401	No Hit
GCGGCTATTATTAAGAGTGATGCGTAAAATGAATACTCGACTGGAACCGG	3	0.2506265664160401	No Hit
TGTAAATGGCAAAATAAATGGGATTAAAAAGCATATAAATGGACATACGA	3	0.2506265664160401	No Hit
ATGCCTATTTCATCTTCATTCAGAACTAAATGTAGCCCTGATATTAGTAT	2	0.1670843776106934	No Hit
CCCAGGGCAGTATGATGGGACCAGGAATGCAGGGTGGTCCAAACAGCATG	2	0.1670843776106934	No Hit
GACACCCTACTAGCGTCTGGGAGTGCGCCAATCCAAATGTATATAGTGAA	2	0.1670843776106934	No Hit
CTGGTATGCTGTCAGATACCATTGTTTGGTATTATGTCCTCAGACTCTGC	2	0.1670843776106934	No Hit
AGAGGTAAAATAGCCAAGGCATCTGGTAATTATGCCACTGTCATCTCACA	2	0.1670843776106934	No Hit
TAGATATTGTCATATAGGATGGTATGTCAACAAAGATTCAAGTGTAGCTG	2	0.1670843776106934	No Hit
GTTGTCCCCAAGGATGTCAACGCCGCCATTGCTACCATCAAGACCAAGAG	2	0.1670843776106934	No Hit
GTCAAATACTCATTTAGGGATATATATATATATTCTGTGTATAAACAAAC	2	0.1670843776106934	No Hit
TAACTCATAAAACCCACCAATCTTATTTTCTTGTTGGTAGAGTGCCTGTA	2	0.1670843776106934	No Hit
CACATGCTTTCTGCTGTAAACCATATATTTTAAATGAATTTTAAATGAAT	2	0.1670843776106934	No Hit
GTTGATGATGAAGATGATATTTTTGGCCCTTATCATGTCAAGCGATTGTT	2	0.1670843776106934	No Hit
TAAAAATTGGTTTAAAAGTTAGTGAAGCATACAACTTAAGAACTTTAATA	2	0.1670843776106934	No Hit
CGTCGAGCCATACAACTCCATCCTGACCACCCATACCACCCTGGAGCACT	2	0.1670843776106934	No Hit
ATTTGGACTTGACCGAAGATTTGGAAGGAAACGTCAAATACGAAGAATGC	2	0.1670843776106934	No Hit
CGAGAACGTAATTTCGGTTCCCAGCAAGAAGGTAGACAACTGGGCGCTTC	2	0.1670843776106934	No Hit
CGTCAGTGAACGTACGGACAAATTTTCGACAAACTCTTTAAAAAACTTTT	2	0.1670843776106934	No Hit
AAAACTGTGTGTATGTCTGTTTACATCAACTGCCATGGCCGATTGGACAA	2	0.1670843776106934	No Hit
CGATGATGTTGCTGCTTTGGTTGTGGACAATGGATCCGGTATGTGTAAGG	2	0.1670843776106934	No Hit
GTCTTCCTCCTTTATTAGGGTCAGTTTTAAAATTGTATGGCGTTTTGGTG	2	0.1670843776106934	No Hit
CGTGTCTTCTATCGTGTACGATCTTCCTGCGCCCGTGAATATTTCTGCTA	2	0.1670843776106934	No Hit
CGTTCTTCTTGCTTTTTTTTAGATTATTTTTCGACAGTTTTTATCATTGT	2	0.1670843776106934	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2	0.1670843776106934	No Hit
TTTTTATCTGTTTTATTTCCTATATGGCTGATGGATCCAGAGAATTTTAA	2	0.1670843776106934	No Hit
GATGAAGAAGGTGATGATGAAGAAGACCATGATCATGACCACGATGAATT	2	0.1670843776106934	No Hit
GAATTGTTGAGGATTTCCAAGGACAAAAGAGCACTGAAGTTCTGTAAAAA	2	0.1670843776106934	No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT	2	0.1670843776106934	Illumina Single End PCR Primer 1 (100% over 50bp)
CTTCTTCCGTGTTTTTTTTCGTCATTCATTTTTTGTTAATTGTTGATCAT	2	0.1670843776106934	No Hit
CGAGTCCAGTGTGTCTGTGATTGTGATTTTGTATGAATCCTGGATATTGT	2	0.1670843776106934	No Hit
TTCACATGTAGCTGTAATGACGGATACGACGGGAACGGTGTCACTTGTAC	2	0.1670843776106934	No Hit
CCACTTTAAACAAGCCTCCAACTTCCTGTGGCCATTCAAATTGAACACGC	2	0.1670843776106934	No Hit
CAGTCAGCAGCCATCGTCGCAGCCGCAGCCGGATACTACAGCGCAGTCGG	2	0.1670843776106934	No Hit
CGGGTGTACGAGATTGTTTATTTCAGTGGGACATACTTTATGTGCCAGAT	2	0.1670843776106934	No Hit
ATTAATACCATATCAGAGTAACTGTGATAATGCTTGCGTTGTCAAATCCA	2	0.1670843776106934	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers

Summary