7_CAGATC_L001_R1_001_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 599 lines in total Total number of methylation call strings processed: 599 Final Cytosine Methylation Report ================================= Total number of C's analysed: 5333 Total methylated C's in CpG context: 271 Total methylated C's in CHG context: 41 Total methylated C's in CHH context: 253 Total C to T conversions in CpG context: 618 Total C to T conversions in CHG context: 987 Total C to T conversions in CHH context: 3163 C methylated in CpG context: 30.5% C methylated in CHG context: 4.0% C methylated in CHH context: 7.4%