[M::bwa_idx_load_from_disk] read 0 ALT contigs
[M::process] read 556168 sequences (80000250 bp)...
[M::process] read 555924 sequences (80000213 bp)...
[M::mem_process_seqs] Processed 556168 reads in 161.464 CPU sec, 20.135 real sec
[M::process] read 555928 sequences (80000280 bp)...
[M::mem_process_seqs] Processed 555924 reads in 169.859 CPU sec, 20.903 real sec
[M::process] read 469405 sequences (67560319 bp)...
[M::mem_process_seqs] Processed 555928 reads in 169.280 CPU sec, 20.848 real sec
[M::mem_process_seqs] Processed 469405 reads in 142.941 CPU sec, 17.649 real sec
[main] Version: 0.7.17-r1188
[main] CMD: bwa mem -L 20,5 -t 8 -a -M -T 10 -A 1 -B 4 -O 6 -R @RG\tID:SekiuWA_62\tSM:SekiuWA_62\tPL:Illumina reference.fasta SekiuWA_62.R1.fq.gz
[main] Real time: 84.494 sec; CPU: 646.307 sec