WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4077713 total bases: 587190672 Q20 bases: 576138982(98.1179%) Q30 bases: 558663553(95.1418%) Read1 after filtering: total reads: 4073573 total bases: 586592012 Q20 bases: 575710680(98.145%) Q30 bases: 558300172(95.1769%) Filtering result: reads passed filter: 4073573 reads failed due to low quality: 830 reads failed due to too many N: 3310 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 84.8215% JSON report: SewardAK_Q326.json HTML report: SewardAK_Q326.html fastp -i SewardAK_Q326.F.fq.gz -o SewardAK_Q326.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SewardAK_Q326.json -h SewardAK_Q326.html fastp v0.20.0, time used: 41 seconds