WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3966290 total bases: 571145760 Q20 bases: 560047440(98.0568%) Q30 bases: 542884561(95.0518%) Read1 after filtering: total reads: 3961670 total bases: 570478157 Q20 bases: 559588027(98.0911%) Q30 bases: 542495336(95.0948%) Filtering result: reads passed filter: 3961670 reads failed due to low quality: 1342 reads failed due to too many N: 3278 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 83.3916% JSON report: SekiuWA_FG019.json HTML report: SekiuWA_FG019.html fastp -i SekiuWA_FG019.F.fq.gz -o SekiuWA_FG019.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG019.json -h SekiuWA_FG019.html fastp v0.20.0, time used: 41 seconds