WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4120950 total bases: 593416800 Q20 bases: 582570160(98.1722%) Q30 bases: 565341787(95.2689%) Read1 after filtering: total reads: 4116765 total bases: 592811409 Q20 bases: 582131993(98.1985%) Q30 bases: 564968253(95.3032%) Filtering result: reads passed filter: 4116765 reads failed due to low quality: 762 reads failed due to too many N: 3423 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 82.5385% JSON report: SekiuWA_FG017.json HTML report: SekiuWA_FG017.html fastp -i SekiuWA_FG017.F.fq.gz -o SekiuWA_FG017.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG017.json -h SekiuWA_FG017.html fastp v0.20.0, time used: 42 seconds