WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4851746 total bases: 698651424 Q20 bases: 684904176(98.0323%) Q30 bases: 663472127(94.9647%) Read1 after filtering: total reads: 4846887 total bases: 697948488 Q20 bases: 684402131(98.0591%) Q30 bases: 663047225(94.9995%) Filtering result: reads passed filter: 4846887 reads failed due to low quality: 950 reads failed due to too many N: 3908 reads failed due to too short: 1 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 82.0794% JSON report: SekiuWA_FG013.json HTML report: SekiuWA_FG013.html fastp -i SekiuWA_FG013.F.fq.gz -o SekiuWA_FG013.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG013.json -h SekiuWA_FG013.html fastp v0.20.0, time used: 49 seconds