WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 3234404 total bases: 465754176 Q20 bases: 456490446(98.011%) Q30 bases: 441876346(94.8733%) Read1 after filtering: total reads: 3231279 total bases: 465300321 Q20 bases: 456162389(98.0361%) Q30 bases: 441597144(94.9058%) Filtering result: reads passed filter: 3231279 reads failed due to low quality: 537 reads failed due to too many N: 2588 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 87.0262% JSON report: SekiuWA_FG011.json HTML report: SekiuWA_FG011.html fastp -i SekiuWA_FG011.F.fq.gz -o SekiuWA_FG011.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG011.json -h SekiuWA_FG011.html fastp v0.20.0, time used: 36 seconds