WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 2743605 total bases: 395079120 Q20 bases: 387440350(98.0665%) Q30 bases: 375459652(95.034%) Read1 after filtering: total reads: 2740872 total bases: 394683370 Q20 bases: 387155446(98.0927%) Q30 bases: 375216322(95.0677%) Filtering result: reads passed filter: 2740872 reads failed due to low quality: 509 reads failed due to too many N: 2224 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 88.1766% JSON report: SekiuWA_FG010.json HTML report: SekiuWA_FG010.html fastp -i SekiuWA_FG010.F.fq.gz -o SekiuWA_FG010.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG010.json -h SekiuWA_FG010.html fastp v0.20.0, time used: 33 seconds