WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 5836735 total bases: 840489840 Q20 bases: 823892957(98.0253%) Q30 bases: 798039507(94.9493%) Read1 after filtering: total reads: 5830950 total bases: 839651197 Q20 bases: 823290641(98.0515%) Q30 bases: 797526359(94.9831%) Filtering result: reads passed filter: 5830950 reads failed due to low quality: 1157 reads failed due to too many N: 4628 reads failed due to too short: 0 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 77.2441% JSON report: SekiuWA_FG009.json HTML report: SekiuWA_FG009.html fastp -i SekiuWA_FG009.F.fq.gz -o SekiuWA_FG009.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG009.json -h SekiuWA_FG009.html fastp v0.20.0, time used: 56 seconds