WARNING: cut_by_quality5 is deprecated, please use cut_front instead. Detecting adapter sequence for read1... No adapter detected for read1 Read1 before filtering: total reads: 4271918 total bases: 615156192 Q20 bases: 602990636(98.0224%) Q30 bases: 583957594(94.9283%) Read1 after filtering: total reads: 4267591 total bases: 614530107 Q20 bases: 602546056(98.0499%) Q30 bases: 583581473(94.9639%) Filtering result: reads passed filter: 4267591 reads failed due to low quality: 938 reads failed due to too many N: 3388 reads failed due to too short: 1 reads with adapter trimmed: 0 bases trimmed due to adapters: 0 Duplication rate (may be overestimated since this is SE data): 83.8835% JSON report: SekiuWA_FG006.json HTML report: SekiuWA_FG006.html fastp -i SekiuWA_FG006.F.fq.gz -o SekiuWA_FG006.R1.fq.gz --cut_by_quality5 20 --cut_by_quality3 20 --cut_window_size 5 --cut_mean_quality 15 -q 15 -u 50 -j SekiuWA_FG006.json -h SekiuWA_FG006.html fastp v0.20.0, time used: 44 seconds